Query 016328
Match_columns 391
No_of_seqs 238 out of 2421
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 11:44:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016328.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016328hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 7E-48 2.4E-52 357.3 31.5 293 11-390 9-308 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 1.9E-46 6.5E-51 346.6 31.7 263 91-390 31-298 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 3.5E-46 1.2E-50 345.4 30.8 265 91-390 25-293 (306)
4 2vpj_A Kelch-like protein 12; 100.0 2E-45 6.8E-50 339.5 31.2 261 91-390 32-299 (301)
5 4asc_A Kelch repeat and BTB do 100.0 2.4E-44 8.3E-49 334.6 26.4 271 91-390 14-296 (315)
6 2woz_A Kelch repeat and BTB do 100.0 2.2E-43 7.6E-48 328.5 24.2 286 32-347 14-314 (318)
7 2uvk_A YJHT; unknown function, 100.0 3.2E-43 1.1E-47 332.6 24.5 295 26-378 12-348 (357)
8 2woz_A Kelch repeat and BTB do 100.0 2.4E-42 8.1E-47 321.5 24.3 271 91-390 25-306 (318)
9 2xn4_A Kelch-like protein 2; s 100.0 6.8E-41 2.3E-45 309.3 29.2 286 27-343 9-302 (302)
10 4asc_A Kelch repeat and BTB do 100.0 7.9E-42 2.7E-46 317.6 21.3 290 31-350 2-307 (315)
11 1zgk_A Kelch-like ECH-associat 100.0 6.5E-41 2.2E-45 310.5 25.8 242 26-334 63-305 (308)
12 3ii7_A Kelch-like protein 7; p 100.0 1.5E-40 5.1E-45 307.6 27.3 274 33-335 11-291 (306)
13 2vpj_A Kelch-like protein 12; 100.0 5.6E-40 1.9E-44 303.0 24.7 238 26-334 55-296 (301)
14 2uvk_A YJHT; unknown function, 100.0 5.4E-39 1.8E-43 303.6 25.4 264 104-390 2-315 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 2E-36 6.9E-41 309.0 22.8 251 91-372 413-694 (695)
16 1k3i_A Galactose oxidase precu 100.0 4.2E-35 1.5E-39 298.5 23.5 309 26-350 188-531 (656)
17 2zwa_A Leucine carboxyl methyl 100.0 8.7E-35 3E-39 297.0 23.5 245 101-381 378-644 (695)
18 1k3i_A Galactose oxidase precu 100.0 1.2E-32 4.1E-37 280.5 14.5 310 51-389 168-517 (656)
19 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.012 4.1E-07 54.5 27.7 263 28-374 48-339 (376)
20 3dsm_A Uncharacterized protein 97.7 0.0047 1.6E-07 56.4 19.4 184 28-228 48-243 (328)
21 3dsm_A Uncharacterized protein 97.6 0.027 9.1E-07 51.3 23.9 266 48-371 16-301 (328)
22 3mbr_X Glutamine cyclotransfer 97.6 0.0093 3.2E-07 51.8 19.3 111 103-229 10-122 (243)
23 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.062 2.1E-06 49.6 26.0 247 29-347 99-366 (376)
24 1l0q_A Surface layer protein; 97.4 0.0013 4.3E-08 61.2 12.2 168 34-230 2-178 (391)
25 3mbr_X Glutamine cyclotransfer 97.2 0.021 7.3E-07 49.5 16.6 164 155-374 14-181 (243)
26 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.06 2E-06 50.9 21.5 262 33-374 128-393 (445)
27 3nol_A Glutamine cyclotransfer 97.2 0.028 9.4E-07 49.3 17.0 113 101-229 30-144 (262)
28 3jrp_A Fusion protein of prote 97.1 0.023 7.9E-07 51.9 17.0 95 91-200 34-135 (379)
29 1k8k_C P40, ARP2/3 complex 41 96.8 0.24 8.4E-06 44.8 21.6 145 33-198 19-172 (372)
30 1p22_A F-BOX/WD-repeat protein 96.8 0.075 2.5E-06 50.1 18.1 212 33-286 142-356 (435)
31 2iwa_A Glutamine cyclotransfer 96.7 0.2 7E-06 44.0 18.7 112 102-229 9-124 (266)
32 3nol_A Glutamine cyclotransfer 96.7 0.028 9.7E-07 49.2 12.8 156 163-374 44-203 (262)
33 3bws_A Protein LP49; two-domai 96.6 0.13 4.4E-06 48.1 18.2 153 33-202 133-295 (433)
34 3nok_A Glutaminyl cyclase; bet 96.6 0.079 2.7E-06 46.5 15.2 105 106-229 47-153 (268)
35 2ovr_B FBW7, F-BOX/WD repeat p 96.6 0.22 7.4E-06 46.9 19.8 211 34-286 169-382 (445)
36 4aez_A CDC20, WD repeat-contai 96.6 0.12 4.2E-06 48.0 17.6 93 91-201 157-250 (401)
37 3ow8_A WD repeat-containing pr 96.6 0.15 5.1E-06 46.0 17.7 99 121-243 133-234 (321)
38 3jro_A Fusion protein of prote 96.5 0.036 1.2E-06 56.7 14.8 95 91-200 32-133 (753)
39 3v7d_B Cell division control p 96.5 0.43 1.5E-05 45.0 21.3 23 33-60 131-153 (464)
40 1rwi_B Serine/threonine-protei 96.4 0.3 1E-05 42.1 18.4 172 33-229 34-210 (270)
41 4ery_A WD repeat-containing pr 96.4 0.19 6.4E-06 44.7 17.2 99 121-243 76-177 (312)
42 1ri6_A Putative isomerase YBHE 96.3 0.08 2.7E-06 47.5 14.5 98 91-204 61-166 (343)
43 3bws_A Protein LP49; two-domai 96.3 0.12 4.2E-06 48.2 16.2 97 91-204 145-248 (433)
44 2iwa_A Glutamine cyclotransfer 96.3 0.17 5.9E-06 44.5 15.5 155 164-374 23-183 (266)
45 1l0q_A Surface layer protein; 96.2 0.046 1.6E-06 50.4 12.2 144 33-203 43-193 (391)
46 3v7d_B Cell division control p 96.2 0.74 2.5E-05 43.3 20.9 132 120-283 278-410 (464)
47 3jrp_A Fusion protein of prote 96.2 0.088 3E-06 47.9 13.9 96 121-231 22-124 (379)
48 1r5m_A SIR4-interacting protei 96.1 0.18 6.2E-06 46.5 16.1 64 121-201 216-280 (425)
49 1k8k_C P40, ARP2/3 complex 41 96.1 0.081 2.8E-06 48.1 13.4 104 121-244 19-125 (372)
50 1got_B GT-beta; complex (GTP-b 96.1 0.4 1.4E-05 43.4 17.7 101 121-243 108-212 (340)
51 2qc5_A Streptogramin B lactona 96.0 0.71 2.4E-05 40.2 23.3 170 33-228 30-205 (300)
52 2z2n_A Virginiamycin B lyase; 95.9 0.81 2.8E-05 39.8 24.1 169 33-228 25-200 (299)
53 3odt_A Protein DOA1; ubiquitin 95.8 0.6 2.1E-05 40.9 17.2 24 32-60 27-50 (313)
54 3hfq_A Uncharacterized protein 95.7 0.23 7.9E-06 44.9 14.5 102 90-205 63-178 (347)
55 2hes_X YDR267CP; beta-propelle 95.6 1.2 4E-05 40.0 19.7 188 121-351 118-319 (330)
56 3nok_A Glutaminyl cyclase; bet 95.5 0.29 9.9E-06 42.9 13.4 153 163-374 56-212 (268)
57 3fm0_A Protein CIAO1; WDR39,SG 95.5 0.14 4.8E-06 46.6 12.2 105 121-244 27-134 (345)
58 2hqs_A Protein TOLB; TOLB, PAL 95.4 0.48 1.7E-05 44.4 15.9 200 121-379 189-394 (415)
59 3vgz_A Uncharacterized protein 95.3 1.5 5E-05 39.2 20.3 98 90-202 69-176 (353)
60 2ojh_A Uncharacterized protein 95.3 0.27 9.4E-06 42.5 13.0 107 87-207 19-127 (297)
61 4g56_B MGC81050 protein; prote 95.3 1.3 4.5E-05 40.2 18.1 101 121-243 150-255 (357)
62 1gxr_A ESG1, transducin-like e 95.2 0.69 2.4E-05 40.9 15.8 123 90-231 119-245 (337)
63 3ow8_A WD repeat-containing pr 95.2 1.1 3.7E-05 40.2 16.9 100 121-243 91-192 (321)
64 3jro_A Fusion protein of prote 95.2 0.21 7.3E-06 50.9 13.4 104 121-244 20-130 (753)
65 1p22_A F-BOX/WD-repeat protein 95.1 0.92 3.1E-05 42.4 16.9 103 117-244 138-240 (435)
66 3u4y_A Uncharacterized protein 95.1 0.3 1E-05 43.6 13.0 131 32-179 8-147 (331)
67 3dwl_C Actin-related protein 2 95.1 0.063 2.1E-06 49.2 8.3 96 121-231 22-121 (377)
68 1qhu_A Protein (hemopexin); be 95.0 2.1 7.3E-05 40.6 18.7 59 121-200 158-216 (460)
69 4aow_A Guanine nucleotide-bind 95.0 0.38 1.3E-05 42.9 13.2 52 172-232 185-237 (340)
70 3dwl_C Actin-related protein 2 94.8 0.28 9.6E-06 44.7 12.0 134 91-244 34-175 (377)
71 2ojh_A Uncharacterized protein 94.7 0.48 1.7E-05 40.9 12.9 144 48-207 21-170 (297)
72 2pbi_B Guanine nucleotide-bind 94.7 1.6 5.4E-05 39.7 16.8 21 121-147 117-137 (354)
73 1rwi_B Serine/threonine-protei 94.7 1.9 6.4E-05 36.9 20.4 119 91-229 47-168 (270)
74 1vyh_C Platelet-activating fac 94.6 0.86 2.9E-05 42.4 15.2 143 34-202 120-268 (410)
75 3vl1_A 26S proteasome regulato 94.6 1.4 4.6E-05 40.7 16.4 64 121-201 150-214 (420)
76 2xbg_A YCF48-like protein; pho 94.6 2.5 8.5E-05 38.0 20.9 199 92-348 17-223 (327)
77 1gxr_A ESG1, transducin-like e 94.6 0.47 1.6E-05 42.1 12.7 95 121-231 108-204 (337)
78 3vgz_A Uncharacterized protein 94.5 2 6.8E-05 38.3 17.0 72 121-202 52-123 (353)
79 4ery_A WD repeat-containing pr 94.5 2 6.7E-05 37.8 16.7 64 121-201 34-98 (312)
80 3i2n_A WD repeat-containing pr 94.5 0.53 1.8E-05 42.2 12.9 103 121-244 128-241 (357)
81 2hqs_A Protein TOLB; TOLB, PAL 94.5 0.75 2.6E-05 43.0 14.3 101 91-206 204-307 (415)
82 4e54_B DNA damage-binding prot 94.4 0.92 3.2E-05 42.5 14.8 145 33-201 131-284 (435)
83 2pm9_A Protein WEB1, protein t 94.3 2.5 8.7E-05 38.6 17.6 98 122-231 178-284 (416)
84 1pgu_A Actin interacting prote 94.1 2.6 9E-05 40.8 18.1 26 337-374 305-330 (615)
85 3b7f_A Glycosyl hydrolase, BNR 94.1 3.6 0.00012 37.9 18.6 95 100-206 43-154 (394)
86 2xbg_A YCF48-like protein; pho 94.0 3.3 0.00011 37.2 20.2 196 98-348 64-268 (327)
87 3zwl_B Eukaryotic translation 93.9 0.58 2E-05 42.0 12.0 23 33-60 43-65 (369)
88 3scy_A Hypothetical bacterial 93.9 3.5 0.00012 37.1 19.3 56 310-375 286-342 (361)
89 2z3z_A Dipeptidyl aminopeptida 93.9 5.2 0.00018 39.9 20.0 64 138-205 235-300 (706)
90 1ri6_A Putative isomerase YBHE 93.7 1.7 5.9E-05 38.4 14.8 68 122-203 141-215 (343)
91 1sq9_A Antiviral protein SKI8; 93.7 1.6 5.4E-05 39.8 14.8 52 90-147 91-157 (397)
92 4gga_A P55CDC, cell division c 93.6 3.7 0.00013 38.0 17.4 95 89-201 124-220 (420)
93 3mmy_A MRNA export factor; mRN 93.6 1 3.4E-05 40.4 13.0 63 121-201 97-162 (368)
94 3zwl_B Eukaryotic translation 93.6 0.79 2.7E-05 41.1 12.3 66 121-203 43-109 (369)
95 4a11_B DNA excision repair pro 93.5 2 6.8E-05 39.1 15.1 23 33-60 55-77 (408)
96 1yfq_A Cell cycle arrest prote 93.5 3.7 0.00013 36.2 18.5 124 90-231 79-215 (342)
97 1nir_A Nitrite reductase; hemo 93.5 3.4 0.00012 40.2 17.3 198 33-263 190-417 (543)
98 3ei3_B DNA damage-binding prot 93.4 1.1 3.7E-05 40.9 13.1 141 35-199 87-236 (383)
99 1sq9_A Antiviral protein SKI8; 93.4 3.1 0.00011 37.8 16.2 107 119-245 23-156 (397)
100 2ynn_A Coatomer subunit beta'; 93.3 1.3 4.6E-05 39.0 13.1 23 33-60 24-46 (304)
101 3sfz_A APAF-1, apoptotic pepti 93.3 1.3 4.3E-05 47.8 15.1 93 121-231 972-1064(1249)
102 3mkq_A Coatomer beta'-subunit; 93.3 4.6 0.00016 40.9 18.7 174 33-231 24-207 (814)
103 3bg1_A Protein SEC13 homolog; 93.1 1.4 4.7E-05 39.2 13.0 69 122-205 71-143 (316)
104 2pm9_A Protein WEB1, protein t 93.0 5.3 0.00018 36.4 20.2 106 122-244 126-247 (416)
105 2pm7_B Protein transport prote 92.9 3.4 0.00011 36.2 15.0 71 121-206 20-93 (297)
106 1w6s_A Methanol dehydrogenase 92.9 5.7 0.00019 39.2 17.8 76 120-205 116-199 (599)
107 2pm7_B Protein transport prote 92.8 4.5 0.00016 35.3 18.5 53 90-148 77-133 (297)
108 2ad6_A Methanol dehydrogenase 92.8 5.8 0.0002 38.9 17.9 80 116-205 110-193 (571)
109 3mkq_A Coatomer beta'-subunit; 92.8 1.2 4.2E-05 45.2 13.5 93 121-231 66-162 (814)
110 3k26_A Polycomb protein EED; W 92.8 5 0.00017 35.6 16.4 65 121-200 127-193 (366)
111 4g56_B MGC81050 protein; prote 92.8 3.8 0.00013 37.1 15.7 28 121-148 53-80 (357)
112 1pby_B Quinohemoprotein amine 92.7 1.8 6.3E-05 38.1 13.2 99 90-203 56-167 (337)
113 1nir_A Nitrite reductase; hemo 92.6 1.7 5.7E-05 42.4 13.6 145 33-201 148-313 (543)
114 3bg1_A Protein SEC13 homolog; 92.6 1.3 4.6E-05 39.3 12.0 104 121-244 24-134 (316)
115 1vyh_C Platelet-activating fac 92.5 2.1 7.1E-05 39.7 13.8 64 121-201 161-225 (410)
116 2hes_X YDR267CP; beta-propelle 92.4 3.3 0.00011 36.9 14.6 104 121-244 69-182 (330)
117 3ju4_A Endo-N-acetylneuraminid 92.4 6.7 0.00023 36.2 21.1 210 100-314 270-511 (670)
118 3pe7_A Oligogalacturonate lyas 92.4 6.1 0.00021 35.7 16.7 65 138-207 168-233 (388)
119 3f3f_A Nucleoporin SEH1; struc 92.2 5.5 0.00019 34.8 17.9 65 122-201 71-145 (351)
120 3no2_A Uncharacterized protein 92.0 3.9 0.00013 35.7 14.2 88 121-229 4-95 (276)
121 3hfq_A Uncharacterized protein 92.0 1.1 3.8E-05 40.2 10.9 61 139-207 19-80 (347)
122 1kb0_A Quinohemoprotein alcoho 92.0 11 0.00037 37.7 21.4 98 116-229 72-182 (677)
123 2aq5_A Coronin-1A; WD40 repeat 92.0 2 6.7E-05 39.5 12.7 96 121-231 93-197 (402)
124 3v9f_A Two-component system se 91.9 3.2 0.00011 42.2 15.3 160 91-282 428-600 (781)
125 3vl1_A 26S proteasome regulato 91.9 7.3 0.00025 35.5 22.4 23 33-60 108-130 (420)
126 3k26_A Polycomb protein EED; W 91.8 0.81 2.8E-05 41.0 9.7 93 122-231 85-182 (366)
127 3sfz_A APAF-1, apoptotic pepti 91.8 2.8 9.5E-05 45.0 15.3 129 91-244 1026-1156(1249)
128 3azo_A Aminopeptidase; POP fam 91.7 4.1 0.00014 40.3 15.5 238 90-374 102-371 (662)
129 2vdu_B TRNA (guanine-N(7)-)-me 91.3 9.4 0.00032 35.6 17.7 65 122-202 210-274 (450)
130 4gga_A P55CDC, cell division c 91.3 5.1 0.00018 37.0 14.9 91 50-149 126-220 (420)
131 4gqb_B Methylosome protein 50; 91.2 3.3 0.00011 37.4 13.2 68 120-201 91-160 (344)
132 1got_B GT-beta; complex (GTP-b 91.1 3 0.0001 37.4 12.8 98 121-243 154-254 (340)
133 2ynn_A Coatomer subunit beta'; 91.0 2.8 9.5E-05 36.9 12.2 101 121-244 24-126 (304)
134 3iz6_a 40S ribosomal protein R 90.9 9 0.00031 34.8 19.7 101 123-244 171-278 (380)
135 4e54_B DNA damage-binding prot 90.8 1.1 3.9E-05 41.8 9.9 103 121-243 131-237 (435)
136 3u4y_A Uncharacterized protein 90.8 3.5 0.00012 36.4 12.8 64 121-202 9-74 (331)
137 3v9f_A Two-component system se 90.7 6.4 0.00022 40.0 16.1 68 121-206 417-485 (781)
138 4aez_A CDC20, WD repeat-contai 90.6 7 0.00024 35.8 15.1 82 138-231 113-195 (401)
139 3ei3_B DNA damage-binding prot 90.6 6.7 0.00023 35.4 14.8 94 123-231 87-184 (383)
140 1pgu_A Actin interacting prote 90.3 13 0.00045 35.7 17.5 58 172-243 456-516 (615)
141 4a11_B DNA excision repair pro 90.3 1.9 6.4E-05 39.2 10.7 70 121-204 55-136 (408)
142 3dm0_A Maltose-binding peripla 90.0 14 0.00048 36.7 17.7 104 121-244 483-590 (694)
143 2z2n_A Virginiamycin B lyase; 89.9 8.6 0.0003 33.0 19.9 170 33-228 67-242 (299)
144 4a2l_A BT_4663, two-component 89.7 14 0.00049 37.5 17.8 59 139-207 428-488 (795)
145 3lrv_A PRE-mRNA-splicing facto 89.6 11 0.00036 33.6 20.4 65 121-201 138-203 (343)
146 1pjx_A Dfpase, DIISOPROPYLFLUO 89.5 9.9 0.00034 33.0 14.6 98 121-229 28-135 (314)
147 2qc5_A Streptogramin B lactona 89.4 9.5 0.00033 32.7 20.2 118 90-228 41-163 (300)
148 1yfq_A Cell cycle arrest prote 89.4 4.3 0.00015 35.8 12.2 93 121-231 22-121 (342)
149 4ggc_A P55CDC, cell division c 89.2 9.2 0.00032 33.1 14.2 11 50-60 46-56 (318)
150 1jmx_B Amine dehydrogenase; ox 89.0 7.5 0.00026 34.2 13.6 153 32-202 9-178 (349)
151 3c5m_A Oligogalacturonate lyas 88.9 3.5 0.00012 37.4 11.4 128 91-229 169-301 (396)
152 1q7f_A NHL, brain tumor CG1071 88.8 11 0.00037 32.4 17.8 175 33-228 88-268 (286)
153 3no2_A Uncharacterized protein 88.7 11 0.00039 32.7 19.9 171 33-230 4-184 (276)
154 2pbi_B Guanine nucleotide-bind 88.7 7.8 0.00027 34.9 13.6 99 122-243 166-268 (354)
155 3i2n_A WD repeat-containing pr 88.7 5.5 0.00019 35.2 12.4 62 122-201 80-150 (357)
156 2ad6_A Methanol dehydrogenase 88.5 19 0.00066 35.1 20.2 100 115-229 56-168 (571)
157 3odt_A Protein DOA1; ubiquitin 88.5 10 0.00035 32.6 13.9 63 121-201 154-216 (313)
158 2dg1_A DRP35, lactonase; beta 88.5 3.8 0.00013 36.3 11.2 150 33-199 55-213 (333)
159 2ecf_A Dipeptidyl peptidase IV 87.9 22 0.00074 35.5 17.5 28 33-60 47-75 (741)
160 1r5m_A SIR4-interacting protei 87.6 16 0.00053 33.0 16.3 64 121-202 119-183 (425)
161 3c5m_A Oligogalacturonate lyas 87.5 16 0.00053 32.8 17.8 63 138-207 168-233 (396)
162 3g4e_A Regucalcin; six bladed 87.2 13 0.00046 32.3 13.8 215 33-285 24-263 (297)
163 1pjx_A Dfpase, DIISOPROPYLFLUO 86.4 12 0.0004 32.5 13.1 93 91-198 93-206 (314)
164 1w6s_A Methanol dehydrogenase 86.4 26 0.0009 34.4 18.1 99 115-228 56-173 (599)
165 1erj_A Transcriptional repress 86.3 4.1 0.00014 37.4 10.3 99 121-243 134-235 (393)
166 3fm0_A Protein CIAO1; WDR39,SG 86.3 4.5 0.00016 36.3 10.3 96 171-286 27-127 (345)
167 1pex_A Collagenase-3, MMP-13; 85.8 14 0.00049 30.7 13.5 53 166-230 28-88 (207)
168 4gqb_B Methylosome protein 50; 85.3 17 0.00058 32.6 13.7 65 166-243 87-155 (344)
169 1kb0_A Quinohemoprotein alcoho 85.2 32 0.0011 34.3 20.4 80 116-205 123-207 (677)
170 4a2l_A BT_4663, two-component 85.2 7.4 0.00025 39.6 12.3 94 91-202 428-529 (795)
171 3scy_A Hypothetical bacterial 84.9 9.3 0.00032 34.2 11.8 98 124-228 15-116 (361)
172 3g4e_A Regucalcin; six bladed 84.8 16 0.00056 31.7 13.1 99 90-199 35-139 (297)
173 3iuj_A Prolyl endopeptidase; h 84.7 24 0.00082 35.2 15.7 174 91-283 156-345 (693)
174 3b7f_A Glycosyl hydrolase, BNR 84.3 24 0.00084 32.1 19.1 100 91-206 82-215 (394)
175 1jmx_B Amine dehydrogenase; ox 84.2 21 0.00071 31.2 14.0 67 121-203 10-78 (349)
176 3frx_A Guanine nucleotide-bind 83.8 22 0.00074 31.2 13.9 98 121-243 118-224 (319)
177 1nr0_A Actin interacting prote 83.3 35 0.0012 33.2 17.9 98 91-205 262-361 (611)
178 3iz6_a 40S ribosomal protein R 83.0 27 0.00091 31.5 15.5 60 172-244 170-235 (380)
179 2xdw_A Prolyl endopeptidase; a 82.8 40 0.0014 33.5 17.1 181 91-285 152-356 (710)
180 2bkl_A Prolyl endopeptidase; m 82.7 25 0.00084 35.0 14.8 179 91-285 148-339 (695)
181 2xzm_R RACK1; ribosome, transl 82.6 25 0.00087 31.1 13.9 21 33-58 38-58 (343)
182 1q7f_A NHL, brain tumor CG1071 82.6 22 0.00075 30.3 21.8 93 121-229 88-182 (286)
183 2ecf_A Dipeptidyl peptidase IV 82.6 14 0.00049 36.8 13.1 58 138-207 129-189 (741)
184 3azo_A Aminopeptidase; POP fam 82.4 27 0.00092 34.2 14.9 100 121-229 198-312 (662)
185 1erj_A Transcriptional repress 81.5 20 0.00069 32.6 12.8 24 171-202 134-157 (393)
186 3f3f_A Nucleoporin SEH1; struc 81.1 21 0.00073 30.8 12.4 61 171-244 22-88 (351)
187 2aq5_A Coronin-1A; WD40 repeat 81.0 23 0.00077 32.2 12.9 24 171-202 93-116 (402)
188 4ggc_A P55CDC, cell division c 80.8 26 0.0009 30.0 16.3 57 89-151 44-102 (318)
189 2vdu_B TRNA (guanine-N(7)-)-me 80.6 36 0.0012 31.5 17.6 95 121-231 160-261 (450)
190 3e5z_A Putative gluconolactona 79.9 28 0.00097 29.9 17.0 148 34-202 40-206 (296)
191 2dg1_A DRP35, lactonase; beta 79.9 13 0.00045 32.7 10.6 95 121-228 55-152 (333)
192 1kv9_A Type II quinohemoprotei 79.7 51 0.0017 32.7 21.7 98 115-228 60-169 (668)
193 1su3_A Interstitial collagenas 79.2 11 0.00036 35.8 9.9 53 166-230 267-327 (450)
194 3mmy_A MRNA export factor; mRN 78.9 33 0.0011 30.0 14.1 93 122-231 54-150 (368)
195 2bkl_A Prolyl endopeptidase; m 78.2 56 0.0019 32.3 20.0 236 91-371 95-350 (695)
196 2ymu_A WD-40 repeat protein; u 77.7 31 0.001 32.9 13.2 91 121-231 396-488 (577)
197 2z3z_A Dipeptidyl aminopeptida 77.3 58 0.002 32.0 18.8 18 189-206 234-251 (706)
198 3o4h_A Acylamino-acid-releasin 77.1 23 0.0008 34.1 12.3 98 93-205 135-233 (582)
199 1sqj_A OXG-RCBH, oligoxylogluc 76.3 70 0.0024 32.5 22.1 199 92-326 39-279 (789)
200 1kv9_A Type II quinohemoprotei 76.3 26 0.0009 34.8 12.5 79 117-205 113-195 (668)
201 1yiq_A Quinohemoprotein alcoho 75.9 34 0.0012 34.2 13.2 79 117-205 117-200 (689)
202 3a0f_A Xyloglucanase; beta-pro 75.8 71 0.0024 32.3 21.1 111 92-211 45-176 (763)
203 1pby_B Quinohemoprotein amine 75.7 13 0.00046 32.3 9.3 107 91-203 12-128 (337)
204 1nr0_A Actin interacting prote 75.5 62 0.0021 31.4 19.3 26 121-152 335-360 (611)
205 2xzm_R RACK1; ribosome, transl 75.5 42 0.0015 29.5 13.3 67 121-202 38-110 (343)
206 3dm0_A Maltose-binding peripla 74.7 35 0.0012 33.8 13.0 65 122-201 395-463 (694)
207 4aow_A Guanine nucleotide-bind 74.5 42 0.0014 29.0 13.9 95 122-231 51-149 (340)
208 3ba0_A Macrophage metalloelast 74.4 37 0.0013 30.9 12.0 27 337-377 328-355 (365)
209 1qks_A Cytochrome CD1 nitrite 74.4 66 0.0023 31.2 21.8 81 138-228 320-407 (567)
210 1yiq_A Quinohemoprotein alcoho 73.5 29 0.00099 34.7 12.0 97 116-228 65-174 (689)
211 2xyi_A Probable histone-bindin 71.7 24 0.00081 32.5 10.4 20 122-147 141-160 (430)
212 1qhu_A Protein (hemopexin); be 71.7 67 0.0023 30.3 13.3 48 171-231 158-207 (460)
213 3hxj_A Pyrrolo-quinoline quino 71.6 45 0.0016 28.8 11.8 81 121-227 70-153 (330)
214 3fvz_A Peptidyl-glycine alpha- 71.4 53 0.0018 28.8 25.8 168 49-230 69-259 (329)
215 1npe_A Nidogen, entactin; glyc 71.4 46 0.0016 28.1 17.1 178 27-228 39-225 (267)
216 2ymu_A WD-40 repeat protein; u 70.7 73 0.0025 30.2 14.6 63 121-201 314-377 (577)
217 3frx_A Guanine nucleotide-bind 70.1 26 0.00088 30.7 9.8 58 171-243 76-135 (319)
218 2xyi_A Probable histone-bindin 70.0 65 0.0022 29.5 13.0 64 121-199 243-309 (430)
219 2fp8_A Strictosidine synthase; 69.0 58 0.002 28.4 13.5 82 116-205 84-180 (322)
220 2xdw_A Prolyl endopeptidase; a 68.9 95 0.0032 30.7 17.9 86 137-230 258-355 (710)
221 1qks_A Cytochrome CD1 nitrite 68.2 18 0.00062 35.3 8.9 59 121-198 166-226 (567)
222 1pex_A Collagenase-3, MMP-13; 66.8 54 0.0018 27.1 16.1 94 116-230 28-136 (207)
223 1n7d_A LDL receptor, low-densi 66.6 1.1E+02 0.0037 30.6 18.4 113 92-228 388-514 (699)
224 1itv_A MMP9; adaptive molecula 64.8 57 0.0019 26.7 12.6 53 166-230 11-73 (195)
225 3hrp_A Uncharacterized protein 64.7 86 0.0029 28.7 14.4 147 32-200 140-299 (409)
226 3o4h_A Acylamino-acid-releasin 64.5 92 0.0032 29.8 13.3 197 118-374 29-229 (582)
227 2p4o_A Hypothetical protein; p 63.6 73 0.0025 27.6 20.0 94 90-200 53-148 (306)
228 3pe7_A Oligogalacturonate lyas 63.4 17 0.00056 32.7 7.2 111 91-208 169-282 (388)
229 2cn3_A Xyloglucanase, beta-1,4 62.8 1.3E+02 0.0044 30.2 23.3 226 91-348 46-321 (737)
230 3ott_A Two-component system se 62.6 88 0.003 31.3 13.1 117 92-231 495-617 (758)
231 3sjl_D Methylamine dehydrogena 61.8 40 0.0014 31.0 9.4 101 90-201 59-171 (386)
232 2p4o_A Hypothetical protein; p 60.8 83 0.0028 27.2 17.6 145 33-199 42-198 (306)
233 1npe_A Nidogen, entactin; glyc 60.1 76 0.0026 26.6 21.1 90 121-228 47-140 (267)
234 1n7d_A LDL receptor, low-densi 58.9 1.3E+02 0.0046 29.9 13.5 118 90-228 475-601 (699)
235 3fvz_A Peptidyl-glycine alpha- 58.9 92 0.0032 27.2 23.7 228 91-372 70-322 (329)
236 1flg_A Protein (quinoprotein e 58.3 1.4E+02 0.0047 29.0 19.7 74 116-205 63-144 (582)
237 3lrv_A PRE-mRNA-splicing facto 57.7 97 0.0033 27.1 14.5 152 33-204 138-299 (343)
238 1ijq_A LDL receptor, low-densi 56.9 1E+02 0.0034 27.0 18.4 171 33-228 41-225 (316)
239 3e5z_A Putative gluconolactona 56.9 91 0.0031 26.5 17.2 87 122-227 40-131 (296)
240 1xfd_A DIP, dipeptidyl aminope 56.0 1.5E+02 0.005 29.1 13.3 65 91-155 38-108 (723)
241 1su3_A Interstitial collagenas 56.0 97 0.0033 29.1 11.1 59 116-198 267-335 (450)
242 3v65_B Low-density lipoprotein 55.2 1.2E+02 0.0042 27.4 20.8 161 89-284 137-307 (386)
243 2cn3_A Xyloglucanase, beta-1,4 55.1 1.7E+02 0.006 29.2 18.4 83 146-230 230-322 (737)
244 3ju4_A Endo-N-acetylneuraminid 55.1 1.2E+02 0.0039 28.3 10.7 135 197-350 267-407 (670)
245 4h5i_A Guanine nucleotide-exch 52.1 1.3E+02 0.0044 26.8 12.3 130 139-286 198-334 (365)
246 2ghs_A AGR_C_1268P; regucalcin 51.6 74 0.0025 27.9 9.4 141 34-198 61-209 (326)
247 3hrp_A Uncharacterized protein 51.3 1.4E+02 0.005 27.1 17.9 123 91-229 153-286 (409)
248 3hxj_A Pyrrolo-quinoline quino 49.6 1.2E+02 0.0042 25.9 12.4 110 92-228 80-194 (330)
249 1yr2_A Prolyl oligopeptidase; 49.1 2.1E+02 0.0072 28.4 14.2 133 138-285 243-383 (741)
250 2hz6_A Endoplasmic reticulum t 48.8 4.3 0.00015 37.2 0.5 51 167-230 5-57 (369)
251 3qhy_B Beta-lactamase inhibito 48.5 60 0.0021 28.1 8.0 57 164-231 151-207 (282)
252 3m0c_C LDL receptor, low-densi 47.9 2.4E+02 0.0081 28.6 19.7 86 121-228 435-532 (791)
253 3qhy_B Beta-lactamase inhibito 44.1 92 0.0032 26.9 8.5 17 164-180 73-89 (282)
254 3v64_C Agrin; beta propeller, 44.0 1.7E+02 0.0059 25.9 19.7 172 32-228 83-262 (349)
255 3iuj_A Prolyl endopeptidase; h 43.9 2.5E+02 0.0084 27.7 14.2 81 138-228 259-344 (693)
256 1hxn_A Hemopexin, HPX; heme, b 43.6 1.4E+02 0.0048 24.8 14.3 58 120-199 27-90 (219)
257 3dr2_A Exported gluconolactona 41.9 1.5E+02 0.0053 25.3 9.8 55 138-200 169-225 (305)
258 3v65_B Low-density lipoprotein 41.3 2E+02 0.0069 25.9 20.0 116 91-228 97-220 (386)
259 3tc9_A Hypothetical hydrolase; 41.2 1.2E+02 0.0041 28.0 9.3 49 171-229 149-198 (430)
260 2fp8_A Strictosidine synthase; 40.7 1.5E+02 0.0052 25.6 9.6 72 121-201 239-315 (322)
261 3v64_C Agrin; beta propeller, 36.1 2.3E+02 0.0078 25.1 22.5 160 90-284 95-264 (349)
262 2p9w_A MAL S 1 allergenic prot 35.0 2.5E+02 0.0085 25.1 12.0 154 33-198 147-322 (334)
263 4h5i_A Guanine nucleotide-exch 34.9 2.4E+02 0.0081 24.9 15.6 82 138-232 157-241 (365)
264 1itv_A MMP9; adaptive molecula 34.4 1.9E+02 0.0063 23.5 10.9 92 121-230 64-165 (195)
265 1flg_A Protein (quinoprotein e 33.7 3.2E+02 0.011 26.3 11.3 54 216-282 63-124 (582)
266 1yr2_A Prolyl oligopeptidase; 32.6 2.9E+02 0.01 27.3 11.2 102 91-205 295-401 (741)
267 4d9s_A UVB-resistance protein 31.8 1.8E+02 0.0061 26.5 8.8 17 214-230 287-304 (406)
268 2b4w_A Hypothetical protein, c 31.3 2.6E+02 0.009 24.3 9.0 78 169-248 38-116 (315)
269 2gop_A Trilobed protease; beta 31.2 1.4E+02 0.0046 25.9 7.7 103 91-207 153-259 (347)
270 3ott_A Two-component system se 31.2 4E+02 0.014 26.4 16.6 138 33-199 482-626 (758)
271 2ghs_A AGR_C_1268P; regucalcin 30.8 2.4E+02 0.0082 24.4 9.3 67 121-207 60-126 (326)
272 2ece_A 462AA long hypothetical 30.2 3.5E+02 0.012 25.4 13.0 70 121-201 95-175 (462)
273 2mad_H Methylamine dehydrogena 29.9 3E+02 0.01 24.6 26.1 57 307-377 297-356 (373)
274 3c75_H MADH, methylamine dehyd 29.5 3.4E+02 0.012 25.0 14.4 110 32-151 83-213 (426)
275 1ijq_A LDL receptor, low-densi 29.1 2.8E+02 0.0096 24.0 21.5 114 91-228 11-138 (316)
276 3a0f_A Xyloglucanase; beta-pro 28.7 4.5E+02 0.016 26.3 17.0 107 97-209 162-294 (763)
277 3m0c_C LDL receptor, low-densi 28.2 4.8E+02 0.016 26.4 19.9 133 120-284 481-621 (791)
278 3oyo_A Hemopexin fold protein 27.9 2.6E+02 0.0089 23.2 11.5 114 99-230 46-189 (225)
279 3sjl_D Methylamine dehydrogena 27.4 1.1E+02 0.0036 28.1 6.2 71 121-203 291-367 (386)
280 3tc9_A Hypothetical hydrolase; 27.3 3.6E+02 0.012 24.6 16.4 94 90-202 159-260 (430)
281 1gen_A Gelatinase A; hydrolase 27.0 2.7E+02 0.0091 23.0 11.5 15 216-230 35-49 (218)
282 2mad_H Methylamine dehydrogena 26.7 2.2E+02 0.0076 25.5 8.4 69 121-201 278-352 (373)
283 3lp9_A LS-24; SEED albumin, pl 25.9 1.3E+02 0.0044 25.2 6.0 91 119-230 70-192 (227)
284 1gen_A Gelatinase A; hydrolase 25.5 2.8E+02 0.0097 22.8 11.1 92 121-230 87-193 (218)
285 1k32_A Tricorn protease; prote 25.3 2.2E+02 0.0077 29.6 9.1 81 138-230 358-440 (1045)
286 3gre_A Serine/threonine-protei 24.6 3.7E+02 0.013 23.9 13.7 60 171-243 181-242 (437)
287 4d9s_A UVB-resistance protein 24.5 2.9E+02 0.0099 25.0 8.8 26 16-41 16-42 (406)
288 3p5b_L Low density lipoprotein 22.9 4.2E+02 0.014 23.9 20.0 132 120-283 169-308 (400)
289 1hxn_A Hemopexin, HPX; heme, b 21.9 3.4E+02 0.012 22.4 11.5 94 117-230 68-188 (219)
290 3p5b_L Low density lipoprotein 20.9 4.6E+02 0.016 23.6 20.6 116 91-228 93-220 (400)
291 3gre_A Serine/threonine-protei 20.1 4.6E+02 0.016 23.3 15.6 66 121-202 181-248 (437)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=7e-48 Score=357.33 Aligned_cols=293 Identities=16% Similarity=0.202 Sum_probs=239.2
Q ss_pred CCCCCceehhHHHHHHHHhheecCEEEEecCCCCcccceeEeeecCCCCeeecCCCCCCCCceeeEeecCcccccccccc
Q 016328 11 TTPSPARVVLSIFVMILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPA 90 (391)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~ 90 (391)
+++.+.|. .|+++.+++.||++||. .... .+
T Consensus 9 ~~~~~~~~-------~~~~~~~~~~i~v~GG~-~~~~-----------------------------------------~~ 39 (308)
T 1zgk_A 9 HSSGLVPR-------GSHAPKVGRLIYTAGGY-FRQS-----------------------------------------LS 39 (308)
T ss_dssp -------------------CCCCCCEEEECCB-SSSB-----------------------------------------CC
T ss_pred ccCCeeeC-------CccccCCCCEEEEEeCc-CCCC-----------------------------------------cc
Confidence 34555565 89999999999999996 2222 12
Q ss_pred cccccccccCceEEccCCCCCccCceEEEECCEEEEEeccC---CCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYG---SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~---~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~ 167 (391)
.++.||+.+++|++++++|.+|.+|+++.++++|||+||.. .....++++++||+.+++|+.+++||. +|..|++
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~ 117 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV--PRNRIGV 117 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSS--CCBTCEE
T ss_pred eEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCc--CccccEE
Confidence 67788888999999999999999999999999999999983 233346789999999999999999988 7889999
Q ss_pred EEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeee
Q 016328 168 VTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVK 247 (391)
Q Consensus 168 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 247 (391)
++++++|||+||.++.. ..+++++||+.+++|+.++++|.+|..|++++++++|||+||........+ ++
T Consensus 118 ~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------~~ 187 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCI---HHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNS-------AE 187 (308)
T ss_dssp EEETTEEEEECCEETTE---ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCC-------EE
T ss_pred EEECCEEEEEcCCCCCc---ccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCce-------EE
Confidence 99999999999987654 278999999999999999999999999999999999999999876543333 34
Q ss_pred cCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCC
Q 016328 248 DGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMP 326 (391)
Q Consensus 248 ~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~ 326 (391)
.||+.+++|+.++++|.+|..+++++++++||++||.+... ..++++.|| .+++|+.++++|
T Consensus 188 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p 250 (308)
T 1zgk_A 188 CYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQD-----------------QLNSVERYDVETETWTFVAPMK 250 (308)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEECCCCS
T ss_pred EEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCC-----------------ccceEEEEeCCCCcEEECCCCC
Confidence 44689999999999999999999999999999999987432 367899999 999999999998
Q ss_pred CCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCcccc---ccCCCcccccceeec
Q 016328 327 KPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVS---AFYPFNILCHPHVKC 390 (391)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~lp~~~~~~~~~~~ 390 (391)
.+|.. +++++++++|||+||.+.... .+++++||+++++| ..||.+|..|+++.+
T Consensus 251 ~~r~~--~~~~~~~~~i~v~GG~~~~~~-------~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 251 HRRSA--LGITVHQGRIYVLGGYDGHTF-------LDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp SCCBS--CEEEEETTEEEEECCBCSSCB-------CCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred CCccc--eEEEEECCEEEEEcCcCCCcc-------cceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 88765 456788999999999876432 25899999976665 578999999999864
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.9e-46 Score=346.58 Aligned_cols=263 Identities=17% Similarity=0.269 Sum_probs=224.2
Q ss_pred cccccccccCceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD 170 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~ 170 (391)
.+++||+.+++|++++++|.+|..|+++.++++|||+||.+.... ++++++||+.+++|+.+++||. +|..|+++++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~ 107 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLR-VRTVDSYDPVKDQWTSVANMRD--RRSTLGAAVL 107 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSB-CCCEEEEETTTTEEEEECCCSS--CCBSCEEEEE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCcc-ccceEEECCCCCceeeCCCCCc--cccceEEEEE
Confidence 577788888999999999999999999999999999999876543 5779999999999999999988 7889999999
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCC
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGK 250 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d 250 (391)
+++|||+||.++.. .++++++||+.+++|+.++++|.+|..|++++++++|||+||...... .....++.||
T Consensus 108 ~~~iyv~GG~~~~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-----~~~~~~~~yd 179 (302)
T 2xn4_A 108 NGLLYAVGGFDGST---GLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASR-----QCLSTVECYN 179 (302)
T ss_dssp TTEEEEEEEECSSC---EEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTT-----EECCCEEEEE
T ss_pred CCEEEEEcCCCCCc---cCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCC-----ccccEEEEEe
Confidence 99999999987644 378999999999999999999999999999999999999999854321 1112244556
Q ss_pred cccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCC
Q 016328 251 PLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPD 329 (391)
Q Consensus 251 ~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~ 329 (391)
+.+++|+.++++|.+|..+++++++++||++||.++.. ..++++.|| .+++|+.++++|.+|
T Consensus 180 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~~~~r 242 (302)
T 2xn4_A 180 ATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPL-----------------VRKSVEVYDPTTNAWRQVADMNMCR 242 (302)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSS-----------------BCCCEEEEETTTTEEEEECCCSSCC
T ss_pred CCCCcEEECCCCccccccccEEEECCEEEEECCCCCCc-----------------ccceEEEEeCCCCCEeeCCCCCCcc
Confidence 99999999999999999999999999999999986432 356899999 999999999999887
Q ss_pred CCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCccccc----cCCCcccccceeec
Q 016328 330 SHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVSA----FYPFNILCHPHVKC 390 (391)
Q Consensus 330 ~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~~~----~lp~~~~~~~~~~~ 390 (391)
.. ++++.++++|||+||.+.... ..++++||+++++|. .||.+|..|+++.+
T Consensus 243 ~~--~~~~~~~~~i~v~GG~~~~~~-------~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~ 298 (302)
T 2xn4_A 243 RN--AGVCAVNGLLYVVGGDDGSCN-------LASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVI 298 (302)
T ss_dssp BS--CEEEEETTEEEEECCBCSSSB-------CCCEEEEETTTTEEEECSSCCSSCCBSCEEEEE
T ss_pred cc--CeEEEECCEEEEECCcCCCcc-------cccEEEEcCCCCeEEECCcccCcccccceEEEe
Confidence 65 456889999999999875432 258999999766653 57888999998765
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.5e-46 Score=345.42 Aligned_cols=265 Identities=19% Similarity=0.300 Sum_probs=225.2
Q ss_pred cccccccccCceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD 170 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~ 170 (391)
+++.||+.+++|++++++|.+|.+|+++.++++|||+||.+ ...++++++||+.+++|+.++++|. +|..|+++++
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~ 100 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPT--PRDSLAACAA 100 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSS--CCBSCEEEEE
T ss_pred eEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCc--cccceeEEEE
Confidence 67788889999999999999999999999999999999998 4457889999999999999999987 7889999999
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCC
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGK 250 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d 250 (391)
+++|||+||.+.... ..+++++||+.+++|+.++++|.+|..|++++++++|||+||....... ..+...++.||
T Consensus 101 ~~~iyv~GG~~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~---~~~~~~~~~yd 175 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNS--ALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVS---GRVLNSCEVYD 175 (306)
T ss_dssp TTEEEEECCBBTTBS--CCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTT---CEECCCEEEEE
T ss_pred CCEEEEECCCCCCCc--EeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCc---ccccceEEEeC
Confidence 999999999873322 3789999999999999999999999999999999999999997644321 01122344556
Q ss_pred cccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCC
Q 016328 251 PLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPD 329 (391)
Q Consensus 251 ~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~ 329 (391)
+++++|+.++++|.+|..+++++++++||++||.+... ..++++.|| .+++|+.++++|.+|
T Consensus 176 ~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 176 PATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLG-----------------GLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTE-----------------EBCCEEEEETTTTEEEECCCCSCCB
T ss_pred CCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCC-----------------CCceEEEeeCCCCcEEECCCCCCCc
Confidence 99999999999999999999999999999999986432 367899999 999999999999877
Q ss_pred CCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCcccc---ccCCCcccccceeec
Q 016328 330 SHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVS---AFYPFNILCHPHVKC 390 (391)
Q Consensus 330 ~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~lp~~~~~~~~~~~ 390 (391)
.. +++++++++|||+||.+.... ..+++.||+++.+| ..||.++..|+++.+
T Consensus 239 ~~--~~~~~~~~~i~v~GG~~~~~~-------~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 293 (306)
T 3ii7_A 239 VT--VKCAAVGSIVYVLAGFQGVGR-------LGHILEYNTETDKWVANSKVRAFPVTSCLICV 293 (306)
T ss_dssp SC--CEEEEETTEEEEEECBCSSSB-------CCEEEEEETTTTEEEEEEEEECCSCTTCEEEE
T ss_pred cc--eeEEEECCEEEEEeCcCCCee-------eeeEEEEcCCCCeEEeCCCcccccceeEEEEE
Confidence 65 456788999999999876532 24899999977665 467889999998764
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=339.49 Aligned_cols=261 Identities=16% Similarity=0.255 Sum_probs=225.3
Q ss_pred cccccccccCceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCC---eeeCCCCCCCCCcceEEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT---WGGRFDMPREMAHSHLGM 167 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~---W~~~~~~p~~~~r~~~~~ 167 (391)
.++.||+.+++|+.++++|.+|.+|+++.++++|||+||.+... ..+++++||+.+++ |+.++++|. +|..|++
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~-~~~~~~~~d~~~~~~~~W~~~~~~p~--~r~~~~~ 108 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRS-RLSSVECLDYTADEDGVWYSVAPMNV--RRGLAGA 108 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC-BCCCEEEEETTCCTTCCCEEECCCSS--CCBSCEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCc-cCceEEEEECCCCCCCeeEECCCCCC--CccceeE
Confidence 67778888899999999999999999999999999999987544 46789999999999 999999987 7889999
Q ss_pred EEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeee
Q 016328 168 VTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVK 247 (391)
Q Consensus 168 ~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 247 (391)
+..+++|||+||.++... .+++++||+.+++|+.++++|.+|..|++++++++||++||.+......+ ++
T Consensus 109 ~~~~~~lyv~GG~~~~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------~~ 178 (301)
T 2vpj_A 109 TTLGDMIYVSGGFDGSRR---HTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNS-------VE 178 (301)
T ss_dssp EEETTEEEEECCBCSSCB---CCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCC-------EE
T ss_pred EEECCEEEEEcccCCCcc---cceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccce-------EE
Confidence 999999999999886542 78999999999999999999999999999999999999999875443333 34
Q ss_pred cCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCC
Q 016328 248 DGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMP 326 (391)
Q Consensus 248 ~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~ 326 (391)
.||+.+++|+.++++|.++..+++++++++||++||.+... ..++++.|| .+++|+.++++|
T Consensus 179 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 179 KYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA-----------------HLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEEECCCS
T ss_pred EEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc-----------------ccceEEEEeCCCCcEEECCCCC
Confidence 44689999999999999999999999999999999987542 256899999 999999999998
Q ss_pred CCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCccc---cccCCCcccccceeec
Q 016328 327 KPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV---SAFYPFNILCHPHVKC 390 (391)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~lp~~~~~~~~~~~ 390 (391)
.+|.. ++++.++++|||+||.+.... ..+++.||+++.+ ...||.+|..|+++.+
T Consensus 242 ~~r~~--~~~~~~~~~i~v~GG~~~~~~-------~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 242 TPRCY--VGATVLRGRLYAIAGYDGNSL-------LSSIECYDPIIDSWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp SCCBS--CEEEEETTEEEEECCBCSSSB-------EEEEEEEETTTTEEEEEEEEEEEEESCEEEEE
T ss_pred Ccccc--eeEEEECCEEEEEcCcCCCcc-------cccEEEEcCCCCeEEEcCCCCcccccceEEEe
Confidence 88765 456788999999999876531 2589999996655 4578999999999865
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.4e-44 Score=334.57 Aligned_cols=271 Identities=17% Similarity=0.217 Sum_probs=219.3
Q ss_pred cccccccccCceEEccCC--CCCccCceEEEECCEEEEEeccC-----CCCCCcceeEEEECCCCCeeeCCCCCCCCCcc
Q 016328 91 TFQDLPAPELKWEKMKAA--PVPRLDGAAIQIKNLLYVFAGYG-----SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHS 163 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~--p~~r~~~~~~~~~~~vyv~GG~~-----~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~ 163 (391)
.++.||+.+++|+. +++ |.+|.+|+++.++++|||+||.. ......+++++||+.+++|+.++++|. +|.
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~ 90 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPS--PRC 90 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSS--CEE
T ss_pred ceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCc--chh
Confidence 56677888889987 655 55899999999999999999962 223344569999999999999999987 789
Q ss_pred eEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCC-CCccCCCccce
Q 016328 164 HLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG-ENRYTPEVDHW 242 (391)
Q Consensus 164 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~~ 242 (391)
.|+++.++++|||+||.+........+++++||+.+++|+.++++|.+|..|++++++++|||+||.. ......+
T Consensus 91 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~---- 166 (315)
T 4asc_A 91 LFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNK---- 166 (315)
T ss_dssp SCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCC----
T ss_pred ceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccce----
Confidence 99999999999999997632212347999999999999999999999999999999999999999983 3333333
Q ss_pred EeeeecCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEE
Q 016328 243 SLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKV 321 (391)
Q Consensus 243 ~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~ 321 (391)
++.||+.+++|+.++++|.+|..+++++++++||++||.+... ..++++.|| .+++|+.
T Consensus 167 ---~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 167 ---MCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG-----------------LTSSAEVYSITDNKWAP 226 (315)
T ss_dssp ---EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS-----------------EEEEEEEEETTTTEEEE
T ss_pred ---EEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC-----------------ccceEEEEECCCCeEEE
Confidence 3444699999999999999999999999999999999986542 356899999 8999999
Q ss_pred cCCCCCCCCCceeeEEEECCEEEEEccccCCCC--cccceeEecceEEEecCccccccC-CCcccccceeec
Q 016328 322 LPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHP--TTKKMVLVGEIFQFNLNTLVSAFY-PFNILCHPHVKC 390 (391)
Q Consensus 322 v~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~--~~~~~~~~~~v~~~d~~~~~~~~l-p~~~~~~~~~~~ 390 (391)
++++|.+|.. ++++.++++|||+||.+.... ........+++|+||+++++|..+ |.+|..|+++.+
T Consensus 227 ~~~~p~~r~~--~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~r~~~~~~~~ 296 (315)
T 4asc_A 227 FEAFPQERSS--LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREIAYAAGATFL 296 (315)
T ss_dssp ECCCSSCCBS--CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCSSCCSSCEEE
T ss_pred CCCCCCcccc--eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCCcCccceEEe
Confidence 9999888765 456789999999999864211 001113457999999988887654 677888877654
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.2e-43 Score=328.51 Aligned_cols=286 Identities=18% Similarity=0.301 Sum_probs=230.7
Q ss_pred ecCEEEEecCCCCcccceeEeeecCCCCe-ee--cCCCCCCCCceeeEeecC-cccccc---------cccccccccccc
Q 016328 32 VADFFWASSSKFTSSYLNIASNWSPYHNS-II--LPNNGPQKGENIGVKTKK-DVVPKR---------ILPATFQDLPAP 98 (391)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~--lp~~~~r~~~g~~~~~~~-~~~~~~---------~~~~~~~~~d~~ 98 (391)
.++.||++||. .++.|||.+++ .. ++.+.+|..++++...+. +..++. .+.+.++.||+.
T Consensus 14 ~~~~i~~~GG~-------~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~ 86 (318)
T 2woz_A 14 VKDLILLVNDT-------AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNV 86 (318)
T ss_dssp EEEEEEEECSS-------EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETT
T ss_pred ecchhhhcccc-------ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCC
Confidence 46799999993 47999999999 33 333567887776655544 555552 233348899999
Q ss_pred cCceEEccCCCCCccCceEEEECCEEEEEeccCC-CCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEE
Q 016328 99 ELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGS-IDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVV 177 (391)
Q Consensus 99 ~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~ 177 (391)
+++|++++++|.+|..|+++.++++|||+||.+. ....++++++||+.+++|+.++++|. +|..|++++.+++|||+
T Consensus 87 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~ 164 (318)
T 2woz_A 87 SSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI--KVYGHNVISHNGMIYCL 164 (318)
T ss_dssp TTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS--CEESCEEEEETTEEEEE
T ss_pred CCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC--cccccEEEEECCEEEEE
Confidence 9999999999999999999999999999999863 34457889999999999999999987 78899999999999999
Q ss_pred eCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCce
Q 016328 178 TGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWR 257 (391)
Q Consensus 178 GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~ 257 (391)
||...... ..+++++||+.+++|+.++++|.+|..|++++++++|||+||...... ...++.||+++++|+
T Consensus 165 GG~~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-------~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 165 GGKTDDKK--CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGL-------SASVEAFDLKTNKWE 235 (318)
T ss_dssp CCEESSSC--BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEE-------EEEEEEEETTTCCEE
T ss_pred cCCCCCCC--ccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCc-------cceEEEEECCCCeEE
Confidence 99854432 378999999999999999999999999999999999999999865322 234556679999999
Q ss_pred eecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCceeeE
Q 016328 258 TEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAW 336 (391)
Q Consensus 258 ~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~ 336 (391)
.++++|.+|..+++++++++||++||.+.....+ ..-.....++++.|| .+++|+.+ +|.+|.. +++
T Consensus 236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~--------~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~--~~~ 303 (318)
T 2woz_A 236 VMTEFPQERSSISLVSLAGSLYAIGGFAMIQLES--------KEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYA--SGA 303 (318)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCCBC------------CCBCCBCCCEEEEETTTTEEEEE--ESCCGGG--TTC
T ss_pred ECCCCCCcccceEEEEECCEEEEECCeeccCCCC--------ceeccceeeeEEEEeCCCCEehhh--ccccccc--ccc
Confidence 9999999999999999999999999986432100 000012467899999 99999998 6666654 455
Q ss_pred EEECCEEEEEc
Q 016328 337 VLVNNSIVIVG 347 (391)
Q Consensus 337 ~~~~~~l~i~G 347 (391)
++++++|||+.
T Consensus 304 ~~~~~~iyi~~ 314 (318)
T 2woz_A 304 SCLATRLNLFK 314 (318)
T ss_dssp EEEEEEEEGGG
T ss_pred eeeCCEEEEEE
Confidence 78999999874
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=3.2e-43 Score=332.62 Aligned_cols=295 Identities=17% Similarity=0.156 Sum_probs=215.2
Q ss_pred HHHhheecCEEEEecCCCCcccceeEeeecCCCCeeecCCCCCCCCceeeEeecCcccccccccccccccccc--cCceE
Q 016328 26 ILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAP--ELKWE 103 (391)
Q Consensus 26 ~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~--~~~W~ 103 (391)
.|++++++++||++||.++. ++++||+. +++|+
T Consensus 12 ~~~~~~~~~~iyv~GG~~~~---------------------------------------------~~~~~d~~~~~~~W~ 46 (357)
T 2uvk_A 12 SGTGAIDNDTVYIGLGSAGT---------------------------------------------AWYKLDTQAKDKKWT 46 (357)
T ss_dssp SCEEEEETTEEEEECGGGTT---------------------------------------------CEEEEETTSSSCCEE
T ss_pred ceEEEEECCEEEEEeCcCCC---------------------------------------------eEEEEccccCCCCee
Confidence 57888889999999995431 45566665 48999
Q ss_pred EccCCC-CCccCceEEEECCEEEEEecc-C---CCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEe
Q 016328 104 KMKAAP-VPRLDGAAIQIKNLLYVFAGY-G---SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVT 178 (391)
Q Consensus 104 ~~~~~p-~~r~~~~~~~~~~~vyv~GG~-~---~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~G 178 (391)
++++|| .+|.+|++++++++|||+||. + .....++++++||+.+++|+.+++|+ |.+|..|++++.+++|||+|
T Consensus 47 ~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~G 125 (357)
T 2uvk_A 47 ALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHA-PMGMAGHVTFVHNGKAYVTG 125 (357)
T ss_dssp ECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCC-SSCCSSEEEEEETTEEEEEE
T ss_pred ECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCC-CcccccceEEEECCEEEEEe
Confidence 999999 899999999999999999998 3 23345788999999999999999998 55899999999999999999
Q ss_pred CccCCCC-------------------------------CCCcceeEEEeCCCCceEECCCCCCCCCC-ceEEEECCEEEE
Q 016328 179 GQYGPQC-------------------------------RGPTAHTFVLDTETKKWQDLPPLPVPRYA-PATQLWRGRLHV 226 (391)
Q Consensus 179 G~~~~~~-------------------------------~~~~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~~~~iyv 226 (391)
|.++... ...++++++||+.+++|+.++++|.+|.. |++++++++|||
T Consensus 126 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv 205 (357)
T 2uvk_A 126 GVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWL 205 (357)
T ss_dssp CCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEE
T ss_pred CcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEE
Confidence 9864310 01258999999999999999999976554 999999999999
Q ss_pred EccCCCCccCCCccceEeeeecCCcccCCceeecCCC--CCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCc
Q 016328 227 MGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIP--RGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNE 304 (391)
Q Consensus 227 ~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p--~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~ 304 (391)
+||...... ...+ +.++++|+++++|+.++++| +.+..+++++++++|||+||.+...................
T Consensus 206 ~GG~~~~~~-~~~~---v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~ 281 (357)
T 2uvk_A 206 INGEAKPGL-RTDA---VFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGL 281 (357)
T ss_dssp ECCEEETTE-ECCC---EEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTC
T ss_pred EeeecCCCc-ccCc---eEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccc
Confidence 999753221 1112 22345567999999998774 55667789999999999999753210000000000000001
Q ss_pred eecCcEEEEc-CcCcEEEcCCCCCCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCccccccC
Q 016328 305 VVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVSAFY 378 (391)
Q Consensus 305 ~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~~~~l 378 (391)
....+++.|| .+++|+.++++|.+|.. ++++.++++|||+||.+..+.. .++++.++.++.+|..+
T Consensus 282 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~------~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 282 KKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAGGKA------VTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGGGCE------EEEEEEEEC-CCSCEEE
T ss_pred cceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCCCCE------eeeEEEEEEcCcEeEee
Confidence 1235688999 89999999999988876 4557899999999999865532 25899888887775543
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.4e-42 Score=321.54 Aligned_cols=271 Identities=19% Similarity=0.274 Sum_probs=219.8
Q ss_pred cccccccccCceEEcc-CCCCCccCceEEEECCEEEEEeccCC----C-CCCcceeEEEECCCCCeeeCCCCCCCCCcce
Q 016328 91 TFQDLPAPELKWEKMK-AAPVPRLDGAAIQIKNLLYVFAGYGS----I-DYVHSHVDIYNFTDNTWGGRFDMPREMAHSH 164 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~~~~vyv~GG~~~----~-~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~ 164 (391)
.++.||+.+++|...+ +.|.+|.+|+++.++++|||+||... . ....+++++||+.+++|+.++++|. +|..
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPS--ARCL 102 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSS--CBCS
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCc--cccc
Confidence 4789999999998843 22478999999999999999999631 1 1234559999999999999999988 7889
Q ss_pred EEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCC-ccCCCccceE
Q 016328 165 LGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGEN-RYTPEVDHWS 243 (391)
Q Consensus 165 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~ 243 (391)
|++++++++|||+||.+... ....+++++||+.+++|+.++++|.+|..|++++++++|||+||.... ....+
T Consensus 103 ~~~~~~~~~iyv~GG~~~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~----- 176 (318)
T 2woz_A 103 FGLGEVDDKIYVVAGKDLQT-EASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNR----- 176 (318)
T ss_dssp CEEEEETTEEEEEEEEBTTT-CCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCC-----
T ss_pred cceEEECCEEEEEcCccCCC-CcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccce-----
Confidence 99999999999999986422 123789999999999999999999999999999999999999997432 22222
Q ss_pred eeeecCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEc
Q 016328 244 LAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVL 322 (391)
Q Consensus 244 ~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v 322 (391)
++.||+.+++|+.++++|.+|..+++++++++||++||.+... ..++++.|| .+++|+.+
T Consensus 177 --~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~ 237 (318)
T 2woz_A 177 --VFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG-----------------LSASVEAFDLKTNKWEVM 237 (318)
T ss_dssp --EEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE-----------------EEEEEEEEETTTCCEEEC
T ss_pred --EEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC-----------------ccceEEEEECCCCeEEEC
Confidence 3445699999999999999999999999999999999986432 466899999 99999999
Q ss_pred CCCCCCCCCceeeEEEECCEEEEEccccCCCCccc--ceeEecceEEEecCccccccC-CCcccccceeec
Q 016328 323 PSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTK--KMVLVGEIFQFNLNTLVSAFY-PFNILCHPHVKC 390 (391)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~--~~~~~~~v~~~d~~~~~~~~l-p~~~~~~~~~~~ 390 (391)
+++|.+|.. ++++.++++||++||.+....... ......++|+||+++++|..+ |.++..|+++.+
T Consensus 238 ~~~p~~r~~--~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~r~~~~~~~~ 306 (318)
T 2woz_A 238 TEFPQERSS--ISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLKEIRYASGASCL 306 (318)
T ss_dssp CCCSSCCBS--CEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEEESCCGGGTTCEEE
T ss_pred CCCCCcccc--eEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhhcccccccccceee
Confidence 999988765 466889999999999875321110 011246999999998887765 888999998765
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.8e-41 Score=309.30 Aligned_cols=286 Identities=15% Similarity=0.202 Sum_probs=234.8
Q ss_pred HHhheecCEEEEecCCCCcccceeEeeecCCCCe-eecCC-CCCCCCceeeEeecC-cccccc---cccccccccccccC
Q 016328 27 LGFALVADFFWASSSKFTSSYLNIASNWSPYHNS-IILPN-NGPQKGENIGVKTKK-DVVPKR---ILPATFQDLPAPEL 100 (391)
Q Consensus 27 ~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~-~~~r~~~g~~~~~~~-~~~~~~---~~~~~~~~~d~~~~ 100 (391)
+..+.+++.||++||.+. ..++++++||+.+++ ..++. +.+|..++++...+. +..++. ...+.++.||+.++
T Consensus 9 r~~~~~~~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~ 87 (302)
T 2xn4_A 9 RTPMNLPKLMVVVGGQAP-KAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKD 87 (302)
T ss_dssp ------CEEEEEECCBSS-SBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTT
T ss_pred CcccCCCCEEEEECCCCC-CCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCC
Confidence 344567899999999764 467899999999999 77766 678888877666444 555553 23357899999999
Q ss_pred ceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCc
Q 016328 101 KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQ 180 (391)
Q Consensus 101 ~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~ 180 (391)
+|++++++|.+|..|+++.++++|||+||.+... .++++++||+.+++|+.++++|. +|..|++++++++|||+||.
T Consensus 88 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~ 164 (302)
T 2xn4_A 88 QWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNT--RRSSVGVGVVGGLLYAVGGY 164 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCE
T ss_pred ceeeCCCCCccccceEEEEECCEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCC--cccCceEEEECCEEEEEeCC
Confidence 9999999999999999999999999999987654 36789999999999999999987 78899999999999999998
Q ss_pred cCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeec
Q 016328 181 YGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEI 260 (391)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 260 (391)
++... ...+++++||+++++|+.++++|.+|..|++++++++|||+||.+......+ ++.||+++++|+.++
T Consensus 165 ~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 165 DVASR-QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKS-------VEVYDPTTNAWRQVA 236 (302)
T ss_dssp ETTTT-EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCC-------EEEEETTTTEEEEEC
T ss_pred CCCCC-ccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccce-------EEEEeCCCCCEeeCC
Confidence 76531 2368899999999999999999999999999999999999999875433333 344568999999999
Q ss_pred CCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcC-CCCCCCCCceeeEEE
Q 016328 261 PIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLP-SMPKPDSHIEFAWVL 338 (391)
Q Consensus 261 ~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~-~~~~~~~~~~~~~~~ 338 (391)
++|..|..++++.++++||++||.++.. ..++++.|| .+++|+.++ +||.+|..+ ++++
T Consensus 237 ~~~~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~~~~~r~~~--~~~~ 297 (302)
T 2xn4_A 237 DMNMCRRNAGVCAVNGLLYVVGGDDGSC-----------------NLASVEYYNPTTDKWTVVSSCMSTGRSYA--GVTV 297 (302)
T ss_dssp CCSSCCBSCEEEEETTEEEEECCBCSSS-----------------BCCCEEEEETTTTEEEECSSCCSSCCBSC--EEEE
T ss_pred CCCCccccCeEEEECCEEEEECCcCCCc-----------------ccccEEEEcCCCCeEEECCcccCcccccc--eEEE
Confidence 9999999999999999999999986442 356799999 999999997 788887654 5577
Q ss_pred ECCEE
Q 016328 339 VNNSI 343 (391)
Q Consensus 339 ~~~~l 343 (391)
++++|
T Consensus 298 ~~~~i 302 (302)
T 2xn4_A 298 IDKRL 302 (302)
T ss_dssp EEC--
T ss_pred ecccC
Confidence 77765
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=7.9e-42 Score=317.60 Aligned_cols=290 Identities=17% Similarity=0.243 Sum_probs=234.3
Q ss_pred eecCEEEEecCCCCcccceeEeeecCCCCe---eecCCCCCCCCceeeEeecC-cccccc---------ccccccccccc
Q 016328 31 LVADFFWASSSKFTSSYLNIASNWSPYHNS---IILPNNGPQKGENIGVKTKK-DVVPKR---------ILPATFQDLPA 97 (391)
Q Consensus 31 ~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~---~~lp~~~~r~~~g~~~~~~~-~~~~~~---------~~~~~~~~~d~ 97 (391)
.+++.||++|| ++++.|||.+++ ..+|.+.+|..++.+...+. +..++. ...+.++.||+
T Consensus 2 ~~~~~l~~~GG-------~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~ 74 (315)
T 4asc_A 2 FLQDLIFMISE-------EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDH 74 (315)
T ss_dssp CCEEEEEEEET-------TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEET
T ss_pred ccceEEEEEcC-------CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecC
Confidence 35789999999 579999999999 33333557888777765555 555552 23345899999
Q ss_pred ccCceEEccCCCCCccCceEEEECCEEEEEeccC--CCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEE
Q 016328 98 PELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYG--SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIY 175 (391)
Q Consensus 98 ~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~--~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iy 175 (391)
.+++|++++++|.+|.+|+++.++++|||+||.+ .....++++++||+.+++|+.++++|. +|..|+++.++++||
T Consensus 75 ~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iy 152 (315)
T 4asc_A 75 LDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPY--VVYGHTVLSHMDLVY 152 (315)
T ss_dssp TTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEE
T ss_pred CCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCC--cccceeEEEECCEEE
Confidence 9999999999999999999999999999999975 234557889999999999999999988 789999999999999
Q ss_pred EEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCC
Q 016328 176 VVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKE 255 (391)
Q Consensus 176 v~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~ 255 (391)
|+||...... ..+++++||+.+++|+.+++||.+|..|++++++++|||+||...... ...++.||+++++
T Consensus 153 v~GG~~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~-------~~~~~~yd~~~~~ 223 (315)
T 4asc_A 153 VIGGKGSDRK--CLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGL-------TSSAEVYSITDNK 223 (315)
T ss_dssp EECCBCTTSC--BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSE-------EEEEEEEETTTTE
T ss_pred EEeCCCCCCc--ccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCc-------cceEEEEECCCCe
Confidence 9999844332 379999999999999999999999999999999999999999865432 2345566799999
Q ss_pred ceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCcee
Q 016328 256 WRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEF 334 (391)
Q Consensus 256 W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~ 334 (391)
|+.++++|.+|..+++++++++||++||.+.....+ ........++++.|| .+++|+.+ ++.||.. +
T Consensus 224 W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~--------~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~--~ 291 (315)
T 4asc_A 224 WAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETES--------GELVPTELNDIWRYNEEEKKWEGV--LREIAYA--A 291 (315)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTT--------SCEEEEEEEEEEEEETTTTEEEEE--ESCSSCC--S
T ss_pred EEECCCCCCcccceeEEEECCEEEEECCccccCcCC--------ccccccccCcEEEecCCCChhhhh--ccCCcCc--c
Confidence 999999999999999999999999999985321000 000112467899999 89999999 4555655 4
Q ss_pred eEEEECCEEEEEcccc
Q 016328 335 AWVLVNNSIVIVGGTT 350 (391)
Q Consensus 335 ~~~~~~~~l~i~GG~~ 350 (391)
++++++++||++....
T Consensus 292 ~~~~~~~~l~v~~~~~ 307 (315)
T 4asc_A 292 GATFLPVRLNVLRLTK 307 (315)
T ss_dssp SCEEEEEEECGGGSEE
T ss_pred ceEEeCCEEEEEEehh
Confidence 5688999999987644
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=6.5e-41 Score=310.49 Aligned_cols=242 Identities=18% Similarity=0.250 Sum_probs=206.2
Q ss_pred HHHhheecCEEEEecCCCCcccceeEeeecCCCCeeecCCCCCCCCceeeEeecCcccccccccccccccccccCceEEc
Q 016328 26 ILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKM 105 (391)
Q Consensus 26 ~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 105 (391)
.|+++++++.||++||..... ......+.++.||+.+++|+++
T Consensus 63 ~~~~~~~~~~lyv~GG~~~~~-------------------------------------~~~~~~~~~~~~d~~~~~W~~~ 105 (308)
T 1zgk_A 63 GLAGCVVGGLLYAVGGRNNSP-------------------------------------DGNTDSSALDCYNPMTNQWSPC 105 (308)
T ss_dssp SCEEEEETTEEEEECCEEEET-------------------------------------TEEEECCCEEEEETTTTEEEEC
T ss_pred cceEEEECCEEEEECCCcCCC-------------------------------------CCCeecceEEEECCCCCeEeEC
Confidence 789999999999999953100 0001123678888899999999
Q ss_pred cCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCC
Q 016328 106 KAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQC 185 (391)
Q Consensus 106 ~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~ 185 (391)
+++|.+|..|+++.++++|||+||.+... .++++++||+.+++|+.++++|. +|..|++++++++||++||.++...
T Consensus 106 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~ 182 (308)
T 1zgk_A 106 APMSVPRNRIGVGVIDGHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLT--RRIGVGVAVLNRLLYAVGGFDGTNR 182 (308)
T ss_dssp CCCSSCCBTCEEEEETTEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSS--CCBSCEEEEETTEEEEECCBCSSCB
T ss_pred CCCCcCccccEEEEECCEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCc--cccceEEEEECCEEEEEeCCCCCCc
Confidence 99999999999999999999999987644 35779999999999999999987 7889999999999999999876543
Q ss_pred CCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCC
Q 016328 186 RGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRG 265 (391)
Q Consensus 186 ~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 265 (391)
.+++++||+.+++|+.+++||.+|..|++++++++|||+||........+ ++.||+++++|+.++++|.+
T Consensus 183 ---~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~-------v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 183 ---LNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNS-------VERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp ---CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCC-------EEEEETTTTEEEECCCCSSC
T ss_pred ---CceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccce-------EEEEeCCCCcEEECCCCCCC
Confidence 78999999999999999999999999999999999999999875433333 34446899999999999999
Q ss_pred CcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCcee
Q 016328 266 GPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEF 334 (391)
Q Consensus 266 ~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~ 334 (391)
|..+++++++++||++||.++.. ..++++.|| .+++|+.+++||.+|..+++
T Consensus 253 r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 305 (308)
T 1zgk_A 253 RSALGITVHQGRIYVLGGYDGHT-----------------FLDSVECYDPDTDTWSEVTRMTSGRSGVGV 305 (308)
T ss_dssp CBSCEEEEETTEEEEECCBCSSC-----------------BCCEEEEEETTTTEEEEEEECSSCCBSCEE
T ss_pred ccceEEEEECCEEEEEcCcCCCc-----------------ccceEEEEcCCCCEEeecCCCCCCccccee
Confidence 99999999999999999986532 467899999 99999999999998877644
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=307.60 Aligned_cols=274 Identities=16% Similarity=0.200 Sum_probs=234.0
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCC-CCCCCCceeeEeecC-cccccc--cccccccccccccCceEEccC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPN-NGPQKGENIGVKTKK-DVVPKR--ILPATFQDLPAPELKWEKMKA 107 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~-~~~r~~~g~~~~~~~-~~~~~~--~~~~~~~~~d~~~~~W~~~~~ 107 (391)
.+.||++||... ++++++|||.+++ ..+++ +.+|..++++...+. +..++. ...+.++.||+.+++|+++++
T Consensus 11 ~~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 11 HDYRIALFGGSQ---PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CCEEEEEECCSS---TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred cceEEEEeCCCC---CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 589999999766 6799999999999 77777 778888888776555 666553 234578999999999999999
Q ss_pred CCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCC-C
Q 016328 108 APVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQC-R 186 (391)
Q Consensus 108 ~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~-~ 186 (391)
+|.+|..|+++.++++|||+||.+.....++++++||+.+++|+.++++|. +|..|+++.++++|||+||.++... .
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT--QRCSHGMVEANGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS--CCBSCEEEEETTEEEEECCEESCTTTC
T ss_pred CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC--CcceeEEEEECCEEEEECCCCCCCCcc
Confidence 999999999999999999999997555567889999999999999999988 7889999999999999999876542 1
Q ss_pred CCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCC
Q 016328 187 GPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG 266 (391)
Q Consensus 187 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~ 266 (391)
...+++++||+++++|+.++++|.+|..|++++++++|||+||........+ ++.||+++++|+.++++|.++
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~-------~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDN-------VEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCC-------EEEEETTTTEEEECCCCSCCB
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCce-------EEEeeCCCCcEEECCCCCCCc
Confidence 1268999999999999999999999999999999999999999865433333 344569999999999999999
Q ss_pred cceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCceee
Q 016328 267 PHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFA 335 (391)
Q Consensus 267 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~ 335 (391)
..+++++++++||++||.++.. ..++++.|| .+++|+.++++|.+|..++.+
T Consensus 239 ~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 291 (306)
T 3ii7_A 239 VTVKCAAVGSIVYVLAGFQGVG-----------------RLGHILEYNTETDKWVANSKVRAFPVTSCLI 291 (306)
T ss_dssp SCCEEEEETTEEEEEECBCSSS-----------------BCCEEEEEETTTTEEEEEEEEECCSCTTCEE
T ss_pred cceeEEEECCEEEEEeCcCCCe-----------------eeeeEEEEcCCCCeEEeCCCcccccceeEEE
Confidence 9999999999999999986542 356899999 999999999999888876543
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=302.97 Aligned_cols=238 Identities=19% Similarity=0.284 Sum_probs=204.9
Q ss_pred HHHhheecCEEEEecCCCCcccceeEeeecCCCCeeecCCCCCCCCceeeEeecCcccccccccccccccccccCc---e
Q 016328 26 ILGFALVADFFWASSSKFTSSYLNIASNWSPYHNSIILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELK---W 102 (391)
Q Consensus 26 ~~~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~---W 102 (391)
.|+++++++.||++||.++...++ .++.||+.+++ |
T Consensus 55 ~~~~~~~~~~l~v~GG~~~~~~~~-----------------------------------------~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 55 YVASVSLHDRIYVIGGYDGRSRLS-----------------------------------------SVECLDYTADEDGVW 93 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCC-----------------------------------------CEEEEETTCCTTCCC
T ss_pred cccEEEECCEEEEEcCCCCCccCc-----------------------------------------eEEEEECCCCCCCee
Confidence 789999999999999966544333 56666777777 9
Q ss_pred EEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccC
Q 016328 103 EKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYG 182 (391)
Q Consensus 103 ~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~ 182 (391)
+.++++|.+|..|+++.++++|||+||.+.... ++++++||+.+++|+.++++|. +|..|++++++++||++||.++
T Consensus 94 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~~d~~~~~W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~ 170 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRR-HTSMERYDPNIDQWSMLGDMQT--AREGAGLVVASGVIYCLGGYDG 170 (301)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCSSCB-CCEEEEEETTTTEEEEEEECSS--CCBSCEEEEETTEEEEECCBCS
T ss_pred EECCCCCCCccceeEEEECCEEEEEcccCCCcc-cceEEEEcCCCCeEEECCCCCC--CcccceEEEECCEEEEECCCCC
Confidence 999999999999999999999999999986544 6789999999999999999987 7889999999999999999876
Q ss_pred CCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCC
Q 016328 183 PQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPI 262 (391)
Q Consensus 183 ~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 262 (391)
.. ..+++++||+++++|+.++++|.+|..|++++++++|||+||........+ ++.||+++++|+.++++
T Consensus 171 ~~---~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~-------v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 171 LN---ILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSS-------VEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp SC---BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCC-------EEEEETTTTEEEEECCC
T ss_pred Cc---ccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccce-------EEEEeCCCCcEEECCCC
Confidence 54 378999999999999999999999999999999999999999875443333 34446899999999999
Q ss_pred CCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCcee
Q 016328 263 PRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEF 334 (391)
Q Consensus 263 p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~ 334 (391)
|.++..+++++++++||++||.+... ..++++.|| ++++|+.++++|.+|..+++
T Consensus 241 p~~r~~~~~~~~~~~i~v~GG~~~~~-----------------~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~ 296 (301)
T 2vpj_A 241 TTPRCYVGATVLRGRLYAIAGYDGNS-----------------LLSSIECYDPIIDSWEVVTSMGTQRCDAGV 296 (301)
T ss_dssp SSCCBSCEEEEETTEEEEECCBCSSS-----------------BEEEEEEEETTTTEEEEEEEEEEEEESCEE
T ss_pred CCcccceeEEEECCEEEEEcCcCCCc-----------------ccccEEEEcCCCCeEEEcCCCCcccccceE
Confidence 99999999999999999999986442 356799999 89999999999988776543
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=5.4e-39 Score=303.60 Aligned_cols=264 Identities=17% Similarity=0.192 Sum_probs=203.9
Q ss_pred EccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECC--CCCeeeCCCCC-CCCCcceEEEEEeCCEEEEEeCc
Q 016328 104 KMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFT--DNTWGGRFDMP-REMAHSHLGMVTDGRYIYVVTGQ 180 (391)
Q Consensus 104 ~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~p-~~~~r~~~~~~~~~~~iyv~GG~ 180 (391)
.+++||.+|.+|++++++++|||+||.+. +++++||+. +++|+.+++|| . +|..|++++++++|||+||.
T Consensus 2 ~l~~lP~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~d~~~~~~~W~~~~~~p~~--~R~~~~~~~~~~~lyv~GG~ 74 (357)
T 2uvk_A 2 VLPETPVPFKSGTGAIDNDTVYIGLGSAG-----TAWYKLDTQAKDKKWTALAAFPGG--PRDQATSAFIDGNLYVFGGI 74 (357)
T ss_dssp CSCCCSSCCCSCEEEEETTEEEEECGGGT-----TCEEEEETTSSSCCEEECCCCTTC--CCBSCEEEEETTEEEEECCE
T ss_pred CCCCCCccccceEEEEECCEEEEEeCcCC-----CeEEEEccccCCCCeeECCCCCCC--cCccceEEEECCEEEEEcCC
Confidence 57899999999999999999999999863 369999998 49999999998 5 78999999999999999998
Q ss_pred -c-CCCCCCCcceeEEEeCCCCceEECCCCC-CCCCCceEEEECCEEEEEccCCCCccC----------CC---------
Q 016328 181 -Y-GPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQLWRGRLHVMGGSGENRYT----------PE--------- 238 (391)
Q Consensus 181 -~-~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~~~~----------~~--------- 238 (391)
+ .......++++++||+.+++|+.+++|+ .+|..|++++++++|||+||.....+. +.
T Consensus 75 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (357)
T 2uvk_A 75 GKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINA 154 (357)
T ss_dssp EECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhh
Confidence 3 1111234789999999999999999988 999999999999999999998643200 00
Q ss_pred --------ccceEeeeecCCcccCCceeecCCCCCCcc-eeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCc
Q 016328 239 --------VDHWSLAVKDGKPLEKEWRTEIPIPRGGPH-RACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDD 309 (391)
Q Consensus 239 --------~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~-~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (391)
...+...++.||+.+++|+.++++|..+.. +++++++++|||+||..... ...++
T Consensus 155 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~----------------~~~~~ 218 (357)
T 2uvk_A 155 HYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG----------------LRTDA 218 (357)
T ss_dssp HHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETT----------------EECCC
T ss_pred hhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCC----------------cccCc
Confidence 001223456667999999999999876544 89999999999999975331 13556
Q ss_pred EEEE--c-CcCcEEEcCCCCCCCCCceeeEEEECCEEEEEccccCCCCc----------ccceeEecceEEEecCccc--
Q 016328 310 VYML--D-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPT----------TKKMVLVGEIFQFNLNTLV-- 374 (391)
Q Consensus 310 v~~~--d-~~~~W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~----------~~~~~~~~~v~~~d~~~~~-- 374 (391)
++.| | .+++|+.+++++.|+.++.+++++++++|||+||.+..+.. ........++++||+++.+
T Consensus 219 v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~ 298 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD 298 (357)
T ss_dssp EEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE
T ss_pred eEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee
Confidence 7766 4 68999999999999888888889999999999998643210 0001123478888886555
Q ss_pred -cccCCCcccccceeec
Q 016328 375 -SAFYPFNILCHPHVKC 390 (391)
Q Consensus 375 -~~~lp~~~~~~~~~~~ 390 (391)
...||.+|..|.++.+
T Consensus 299 ~~~~~p~~r~~~~~~~~ 315 (357)
T 2uvk_A 299 KSGELSQGRAYGVSLPW 315 (357)
T ss_dssp EEEECSSCCBSSEEEEE
T ss_pred eCCCCCCCcccceeEEe
Confidence 4578999999988764
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2e-36 Score=309.03 Aligned_cols=251 Identities=13% Similarity=0.094 Sum_probs=194.4
Q ss_pred cccccccccCceEEcc-C-----CCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCc
Q 016328 91 TFQDLPAPELKWEKMK-A-----APVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAH 162 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~-~-----~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r 162 (391)
++++||+.+++|+.++ + +|.+|.+|+++.+ +++|||+||.+.....++++|+||+.+++|+.+++||. +|
T Consensus 413 ~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~--~R 490 (695)
T 2zwa_A 413 EILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSH--TR 490 (695)
T ss_dssp CEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSB--CC
T ss_pred cEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCC--Cc
Confidence 5677788888999887 5 7999999999999 99999999998766567889999999999999999988 78
Q ss_pred ceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC---CCCCCCCceEEEEC---CEEEEEccCCCCcc
Q 016328 163 SHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP---LPVPRYAPATQLWR---GRLHVMGGSGENRY 235 (391)
Q Consensus 163 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~~~~~---~~iyv~GG~~~~~~ 235 (391)
..|+++++ +++|||+||.+... ++++||+.+++|+.+++ +|.+|..|++++++ ++|||+||......
T Consensus 491 ~~h~~~~~~~~~iyv~GG~~~~~------~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~ 564 (695)
T 2zwa_A 491 FRHSACSLPDGNVLILGGVTEGP------AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQT 564 (695)
T ss_dssp BSCEEEECTTSCEEEECCBCSSC------SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSS
T ss_pred ccceEEEEcCCEEEEECCCCCCC------CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCC
Confidence 89999996 99999999986533 89999999999999986 89999999988877 89999999854320
Q ss_pred CCCccceEeeeecCCcccCC------ceeecCC-CCCCcceeEEEEC-CEEEEEeCCCCCCCcCCCCCccccCcCCceec
Q 016328 236 TPEVDHWSLAVKDGKPLEKE------WRTEIPI-PRGGPHRACVVVD-DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVY 307 (391)
Q Consensus 236 ~~~~~~~~~~~~~~d~~~~~------W~~~~~~-p~~~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~ 307 (391)
.....++.||+.+++ |+.+.++ +.+|.++++++++ ++|||+||.+.... ....
T Consensus 565 -----~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~--------------~~~~ 625 (695)
T 2zwa_A 565 -----TVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL--------------FDRT 625 (695)
T ss_dssp -----CBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC--------------CCTT
T ss_pred -----eeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC--------------CCCC
Confidence 111234455688998 8888765 4777788999999 99999999864421 0136
Q ss_pred CcEEEEc-CcCcEEEcCCCCCC------CCCceeeEEEECC-EEEEEccccCCCCcccceeEecceEEEecCc
Q 016328 308 DDVYMLD-DEMKWKVLPSMPKP------DSHIEFAWVLVNN-SIVIVGGTTEKHPTTKKMVLVGEIFQFNLNT 372 (391)
Q Consensus 308 ~~v~~~d-~~~~W~~v~~~~~~------~~~~~~~~~~~~~-~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~ 372 (391)
++++.|| .+++|+.+. +|.+ ..+.+|+++.+++ +|||+||...-- ...++.+++|.+|+.+
T Consensus 626 ~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cf---sfGt~~n~i~~ldl~~ 694 (695)
T 2zwa_A 626 NSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCY---GFGSVTNVGLKLIAIA 694 (695)
T ss_dssp TSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEEECT---TSCEEECCCEEEEECC
T ss_pred CeEEEEECCCCeEEEee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCccCc---CccccccceEEEEEEc
Confidence 7899999 999999763 3211 1334455566665 999999964321 0113445899998754
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=4.2e-35 Score=298.52 Aligned_cols=309 Identities=12% Similarity=0.085 Sum_probs=223.2
Q ss_pred HHHhhee--cCEEEEecCCCCcc------cceeEeeecCCCCe-eecCC-CCCCCCc--eeeEeecC--ccccccccccc
Q 016328 26 ILGFALV--ADFFWASSSKFTSS------YLNIASNWSPYHNS-IILPN-NGPQKGE--NIGVKTKK--DVVPKRILPAT 91 (391)
Q Consensus 26 ~~~~~~~--~~~ly~~GG~~~~~------~~~~~~~~d~~~~~-~~lp~-~~~r~~~--g~~~~~~~--~~~~~~~~~~~ 91 (391)
.|+++++ +++||++||.+... ..+.++.|||.+++ ..++. +.+|..+ +.+.+.++ +..++... ..
T Consensus 188 ~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-~~ 266 (656)
T 1k3i_A 188 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-KK 266 (656)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-TC
T ss_pred ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-Cc
Confidence 4556666 99999999965422 34689999999999 55555 4445443 34444433 56665433 37
Q ss_pred ccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC-----CCCCCCCcceE
Q 016328 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF-----DMPREMAHSHL 165 (391)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-----~~p~~~~r~~~ 165 (391)
+++||+.+++|+++++||.+|..|+++.+ +++|||+||.......++++|+||+.+++|+.++ +|+. .|..
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~--~~~~- 343 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLT--ADKQ- 343 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCC--CCTT-
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccc--cccc-
Confidence 99999999999999999999999999999 9999999995444445678999999999999974 3443 3433
Q ss_pred EEEEeCCEEEEEeCccCCCC-CCCcceeEEEeCCCCceEECC-CCCC------CCCCceEEE---ECCEEEEEccCCCCc
Q 016328 166 GMVTDGRYIYVVTGQYGPQC-RGPTAHTFVLDTETKKWQDLP-PLPV------PRYAPATQL---WRGRLHVMGGSGENR 234 (391)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~-~~~~~~~~~yd~~~~~W~~~~-~~~~------~r~~~~~~~---~~~~iyv~GG~~~~~ 234 (391)
+++..++++|++||.++... ....+++++||+++++|.... ..+. ++..++++. .+++|||+||.....
T Consensus 344 ~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~ 423 (656)
T 1k3i_A 344 GLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQ 423 (656)
T ss_dssp GGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSS
T ss_pred ceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCC
Confidence 55568999999999876421 123689999999999987543 2211 233445543 589999999975311
Q ss_pred cCCCccceEeeeecCCcccCCceeec--CCCCCCcceeEEEE-CCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEE
Q 016328 235 YTPEVDHWSLAVKDGKPLEKEWRTEI--PIPRGGPHRACVVV-DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVY 311 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (391)
....... ...++.||+.+++|+.+. +||.+|..++++++ +++|||+||.+.... ........+++
T Consensus 424 ~~~~~~~-~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~-----------~~~~~~~~~v~ 491 (656)
T 1k3i_A 424 DSDATTN-AHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIP-----------FEDSTPVFTPE 491 (656)
T ss_dssp SSBCCCC-EEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCT-----------TCCCSBCCCCE
T ss_pred CCCcCCc-ceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcC-----------cCCCCcccceE
Confidence 1111110 113556789999999886 89999988888888 999999999753210 00112456799
Q ss_pred EEc-CcCcEEEcCCCCCCCCCceeeEEEECCEEEEEcccc
Q 016328 312 MLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTT 350 (391)
Q Consensus 312 ~~d-~~~~W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~ 350 (391)
.|| .+++|+.+++++.+|..++.++.+.+++||++||..
T Consensus 492 ~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 492 IYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGL 531 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECCC
T ss_pred EEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCCC
Confidence 999 899999999999999887654344499999999964
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=8.7e-35 Score=296.98 Aligned_cols=245 Identities=14% Similarity=0.172 Sum_probs=193.8
Q ss_pred ceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC-CCC---CCCCcceEEEEEe--CCEE
Q 016328 101 KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF-DMP---REMAHSHLGMVTD--GRYI 174 (391)
Q Consensus 101 ~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p---~~~~r~~~~~~~~--~~~i 174 (391)
+|...+..|.+|.+++ ++++++|||+||.+. ..++++++||+.+++|+.++ ++| .|.+|..|+++++ +++|
T Consensus 378 ~~~~~~~~p~rr~g~~-~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~l 454 (695)
T 2zwa_A 378 QLLECECPINRKFGDV-DVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQL 454 (695)
T ss_dssp EEEECCCTTCCBSCEE-EECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEE
T ss_pred eEeccCCCCCCceeEE-EEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEE
Confidence 4555555666666554 448999999999976 45678999999999999987 632 2348999999999 9999
Q ss_pred EEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEE-CCEEEEEccCCCCccCCCccceEeeeecCCccc
Q 016328 175 YVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLE 253 (391)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~ 253 (391)
||+||.+.... .++++++||+.+++|+.+++||.+|..|+++++ +++|||+||..... .++.||+.+
T Consensus 455 yv~GG~~~~~~--~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----------~v~~yd~~t 522 (695)
T 2zwa_A 455 LLIGGRKAPHQ--GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----------AMLLYNVTE 522 (695)
T ss_dssp EEECCBSSTTC--BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----------SEEEEETTT
T ss_pred EEEcCCCCCCC--ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----------CEEEEECCC
Confidence 99999876542 378999999999999999999999999999996 99999999986543 344556999
Q ss_pred CCceeecC---CCCCCcceeEEEEC---CEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCc------EE
Q 016328 254 KEWRTEIP---IPRGGPHRACVVVD---DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMK------WK 320 (391)
Q Consensus 254 ~~W~~~~~---~p~~~~~~~~~~~~---~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~------W~ 320 (391)
++|+.+++ +|.+|.+|++++++ ++|||+||..... ....++++.|| .+++ |+
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~---------------~~~~~~v~~yd~~~~~w~~~~~W~ 587 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ---------------TTVSDKAIIFKYDAENATEPITVI 587 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS---------------SCBCCEEEEEEECTTCSSCCEEEE
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC---------------CeeeCcEEEEEccCCccccceEEE
Confidence 99999876 78888888888877 8999999985432 01467899999 8888 99
Q ss_pred EcCCC-CCCCCCceeeEEEEC-CEEEEEccccCCCCcccceeEecceEEEecCccccccCCCc
Q 016328 321 VLPSM-PKPDSHIEFAWVLVN-NSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVSAFYPFN 381 (391)
Q Consensus 321 ~v~~~-~~~~~~~~~~~~~~~-~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~~~~lp~~ 381 (391)
.++++ +.+|.. +++++++ ++|||+||.+..... ...++++.||+++++|..++.+
T Consensus 588 ~~~~~p~~~R~~--~~~~~~~~~~iyv~GG~~~~~~~----~~~~~v~~yd~~t~~W~~~~~p 644 (695)
T 2zwa_A 588 KKLQHPLFQRYG--SQIKYITPRKLLIVGGTSPSGLF----DRTNSIISLDPLSETLTSIPIS 644 (695)
T ss_dssp EEEECGGGCCBS--CEEEEEETTEEEEECCBCSSCCC----CTTTSEEEEETTTTEEEECCCC
T ss_pred EcCCCCCCCccc--ceEEEeCCCEEEEECCccCCCCC----CCCCeEEEEECCCCeEEEeecc
Confidence 99875 355554 5667888 999999998755421 1125899999998888765543
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.98 E-value=1.2e-32 Score=280.48 Aligned_cols=310 Identities=11% Similarity=0.011 Sum_probs=212.6
Q ss_pred EeeecCCCCe-eecCCCCCCCCceeeEee-c-C-ccccccc---------ccccccccccccCceEEccCCCCCccCce-
Q 016328 51 ASNWSPYHNS-IILPNNGPQKGENIGVKT-K-K-DVVPKRI---------LPATFQDLPAPELKWEKMKAAPVPRLDGA- 116 (391)
Q Consensus 51 ~~~~d~~~~~-~~lp~~~~r~~~g~~~~~-~-~-~~~~~~~---------~~~~~~~~d~~~~~W~~~~~~p~~r~~~~- 116 (391)
++.|||.+++ ..+++ .|+..++.+++. . . +..++.. ....++.||+.+++|+.++.+|.+|..++
T Consensus 168 ~~~~dp~~~~W~~~~~-~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~ 246 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTID-LPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP 246 (656)
T ss_dssp CCCCCTTSCEEEEEEE-CSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC
T ss_pred cccCCCCCCeeeeecc-CCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc
Confidence 6778999998 54444 244445555542 2 2 4443321 12368899999999999999998887664
Q ss_pred -EE-EECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCc-cCCCCCCCccee
Q 016328 117 -AI-QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQ-YGPQCRGPTAHT 192 (391)
Q Consensus 117 -~~-~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~-~~~~~~~~~~~~ 192 (391)
++ ..+++|||+||.+.. ++++||+.+++|+.+++||. +|..|+++++ +++|||+||. ++.. ..+++
T Consensus 247 ~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~--~R~~~s~~~~~dg~iyv~GG~~~~~~---~~~~~ 316 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQV--ARGYQSSATMSDGRVFTIGGSWSGGV---FEKNG 316 (656)
T ss_dssp EEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSS--CCSSCEEEECTTSCEEEECCCCCSSS---CCCCE
T ss_pred cccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCc--cccccceEEecCCeEEEEeCcccCCc---ccccc
Confidence 33 358999999998643 59999999999999999988 7888999998 9999999995 4433 27899
Q ss_pred EEEeCCCCceEEC-----CCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCC---
Q 016328 193 FVLDTETKKWQDL-----PPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPR--- 264 (391)
Q Consensus 193 ~~yd~~~~~W~~~-----~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--- 264 (391)
++||+++++|+.+ .+|+..|.. +++..++++|++||.++..+... ....++.||+++++|......+.
T Consensus 317 e~yd~~t~~W~~~~~~~~~p~~~~~~~-~~~~~~~~iyv~Gg~~g~~~~~~---~~~~v~~yd~~~~~w~~~~~~~~~~~ 392 (656)
T 1k3i_A 317 EVYSPSSKTWTSLPNAKVNPMLTADKQ-GLYRSDNHAWLFGWKKGSVFQAG---PSTAMNWYYTSGSGDVKSAGKRQSNR 392 (656)
T ss_dssp EEEETTTTEEEEETTSCSGGGCCCCTT-GGGTTTCSCCEEECGGGCEEECC---SSSEEEEEECSTTCEEEEEEECEETT
T ss_pred eEeCCCCCcceeCCCcccccccccccc-ceeecCCceEEEECCCCcEEEec---CccceeeeecCCcceeecCCcccccc
Confidence 9999999999997 456666553 55668999999999865322100 01134455688999875432221
Q ss_pred ----CCcceeEEE---ECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcC--CCCCCCCCcee
Q 016328 265 ----GGPHRACVV---VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLP--SMPKPDSHIEF 334 (391)
Q Consensus 265 ----~~~~~~~~~---~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~--~~~~~~~~~~~ 334 (391)
.+..+++++ .+++||++||....... .... ...+++.|| .+++|+.+. +||.+|..+
T Consensus 393 ~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~-------~~~~----~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~-- 459 (656)
T 1k3i_A 393 GVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS-------DATT----NAHIITLGEPGTSPNTVFASNGLYFARTFH-- 459 (656)
T ss_dssp EECCCCBTCEEEEEETTTTEEEEECCBSSSSSS-------BCCC----CEEEEECCSTTSCCEEEECTTCCSSCCBSC--
T ss_pred ccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC-------CcCC----cceEEEcCCCCCCCeeEEccCCCCCCcccC--
Confidence 122334443 58999999997532110 0000 012588899 899999987 888887654
Q ss_pred eEEEE-CCEEEEEccccCCCCcccceeEecceEEEecCcccc---ccCCCcccccceee
Q 016328 335 AWVLV-NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVS---AFYPFNILCHPHVK 389 (391)
Q Consensus 335 ~~~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~lp~~~~~~~~~~ 389 (391)
+++++ +++|||+||.+...... ......++++||+++++| ..+|.+|..|+++.
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~-~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ 517 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFE-DSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISL 517 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTC-CCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEE
T ss_pred CeEECCCCCEEEECCcccCcCcC-CCCcccceEEEcCCCCceeecCCCCCccccccHhh
Confidence 44555 99999999986321100 001235889999866664 56788999998654
No 19
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.94 E-value=0.012 Score=54.45 Aligned_cols=263 Identities=14% Similarity=0.148 Sum_probs=135.4
Q ss_pred HhheecCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCC-------CCCc-eeeEeecCccccccccccccccccc
Q 016328 28 GFALVADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGP-------QKGE-NIGVKTKKDVVPKRILPATFQDLPA 97 (391)
Q Consensus 28 ~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~-------r~~~-g~~~~~~~~~~~~~~~~~~~~~~d~ 97 (391)
.-++.++.||+... + ..+.+||+++++ ........ .... +......+....+. ....+.++|.
T Consensus 48 ~p~v~~~~v~~~~~-~-----g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~~g~l~a~d~ 120 (376)
T 3q7m_A 48 HPALADNVVYAADR-A-----GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS-EKAQVYALNT 120 (376)
T ss_dssp CCEEETTEEEEECT-T-----SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE-TTSEEEEEET
T ss_pred ccEEECCEEEEEcC-C-----CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc-CCCEEEEEEC
Confidence 34667899998763 1 278899999887 33322111 1111 22222222111111 1236888888
Q ss_pred ccC--ceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCCCcceEEEEEeCCE
Q 016328 98 PEL--KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRY 173 (391)
Q Consensus 98 ~~~--~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~r~~~~~~~~~~~ 173 (391)
.+. .|+.-..-. ...+.+..++.||+... ...+..||+.+.+ |+.-...+....+...+.+..++.
T Consensus 121 ~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~ 190 (376)
T 3q7m_A 121 SDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGA 190 (376)
T ss_dssp TTCCEEEEEECSSC---CCSCCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTE
T ss_pred CCCCEEEEEeCCCc---eEcCCEEECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCE
Confidence 765 586532211 12233456888888543 2359999998775 887433221101222344556888
Q ss_pred EEEEeCccCCCCCCCcceeEEEeCCCCc--eEECCCCCCCC--------CCceEEEECCEEEEEccCCCCccCCCccceE
Q 016328 174 IYVVTGQYGPQCRGPTAHTFVLDTETKK--WQDLPPLPVPR--------YAPATQLWRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 174 iyv~GG~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
||+- .. ...+..||+++.+ |+.-...+... .....++.++.+|+.+. . .....+
T Consensus 191 v~~g-~~--------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~-----g~l~~~- 254 (376)
T 3q7m_A 191 AVVG-GD--------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N-----GNLTAL- 254 (376)
T ss_dssp EEEC-CT--------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T-----SCEEEE-
T ss_pred EEEE-cC--------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C-----cEEEEE-
Confidence 7763 21 2468889987654 77643322111 22333466888888642 1 112222
Q ss_pred eeeecCCcc--cCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-Cc--Cc
Q 016328 244 LAVKDGKPL--EKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DE--MK 318 (391)
Q Consensus 244 ~~~~~~d~~--~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~--~~ 318 (391)
|++ +..|+...+ . ....+..++.||+.... ..++.+| .+ ..
T Consensus 255 ------d~~tG~~~w~~~~~--~---~~~~~~~~~~l~~~~~~-----------------------g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 255 ------DLRSGQIMWKRELG--S---VNDFIVDGNRIYLVDQN-----------------------DRVMALTIDGGVTL 300 (376)
T ss_dssp ------ETTTCCEEEEECCC--C---EEEEEEETTEEEEEETT-----------------------CCEEEEETTTCCEE
T ss_pred ------ECCCCcEEeeccCC--C---CCCceEECCEEEEEcCC-----------------------CeEEEEECCCCcEE
Confidence 233 334664321 1 22456678888887532 1388888 54 35
Q ss_pred EEEcCCCCCCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCccc
Q 016328 319 WKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 319 W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~ 374 (391)
|+.-. +... .. .+.++.++.||+.... ..++.+|+++.+
T Consensus 301 w~~~~-~~~~-~~--~~~~~~~~~l~v~~~~-------------g~l~~~d~~tG~ 339 (376)
T 3q7m_A 301 WTQSD-LLHR-LL--TSPVLYNGNLVVGDSE-------------GYLHWINVEDGR 339 (376)
T ss_dssp EEECT-TTTS-CC--CCCEEETTEEEEECTT-------------SEEEEEETTTCC
T ss_pred Eeecc-cCCC-cc--cCCEEECCEEEEEeCC-------------CeEEEEECCCCc
Confidence 87631 2211 11 2235678888875421 157777776544
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.65 E-value=0.0047 Score=56.37 Aligned_cols=184 Identities=9% Similarity=0.012 Sum_probs=99.0
Q ss_pred HhheecCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC--cccccccccccccccccccCceE
Q 016328 28 GFALVADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK--DVVPKRILPATFQDLPAPELKWE 103 (391)
Q Consensus 28 ~~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~--~~~~~~~~~~~~~~~d~~~~~W~ 103 (391)
+.++-++++|+.... -+.+..+|+.+.+ ..++. .....+++....+ +... .....+..+|+.+.+-.
T Consensus 48 ~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~--~~~p~~i~~~~~g~lyv~~--~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 48 SMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITG--FTSPRYIHFLSDEKAYVTQ--IWDYRIFIINPKTYEIT 118 (328)
T ss_dssp EEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEEC--CSSEEEEEEEETTEEEEEE--BSCSEEEEEETTTTEEE
T ss_pred EEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCC--CCCCcEEEEeCCCeEEEEE--CCCCeEEEEECCCCeEE
Confidence 345668899998752 2478899999887 44543 1122334432222 2222 12457888998877543
Q ss_pred EccCCCCC----ccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeC
Q 016328 104 KMKAAPVP----RLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTG 179 (391)
Q Consensus 104 ~~~~~p~~----r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG 179 (391)
..-+.... ..-..++..++++||..- . ..+.+.++|+.+++....-+.... + ......-++++|+...
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-~----~~~~v~viD~~t~~~~~~i~~g~~-p--~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQYGKYVYVNCW-S----YQNRILKIDTETDKVVDELTIGIQ-P--TSLVMDKYNKMWTITD 190 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEEETTEEEEEEC-T----TCCEEEEEETTTTEEEEEEECSSC-B--CCCEECTTSEEEEEBC
T ss_pred EEEEcCCccccCCCcceEEEECCEEEEEcC-C----CCCEEEEEECCCCeEEEEEEcCCC-c--cceEEcCCCCEEEEEC
Confidence 21111110 022344447889999852 0 134699999999876542222110 1 1122234688888753
Q ss_pred ccCCCC--CCCcceeEEEeCCCCceEECCCCCCCCCCceEEEE--CCEEEEEc
Q 016328 180 QYGPQC--RGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMG 228 (391)
Q Consensus 180 ~~~~~~--~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~G 228 (391)
...... ......++++|+++.+....-.++....-..++.. ++.||+..
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~ 243 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN 243 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred CCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence 221110 00136899999998876533233333223344444 56788874
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.62 E-value=0.027 Score=51.28 Aligned_cols=266 Identities=14% Similarity=0.124 Sum_probs=133.1
Q ss_pred ceeEeeecCCCCe-e-ecCC--C---CCCCCceeeEeecC-cccccccccccccccccccCce-EEccCCCCCccCceEE
Q 016328 48 LNIASNWSPYHNS-I-ILPN--N---GPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKW-EKMKAAPVPRLDGAAI 118 (391)
Q Consensus 48 ~~~~~~~d~~~~~-~-~lp~--~---~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~ 118 (391)
-+.+..+|+++++ . .+.. + ......++....+. +.... .+..+..+|+.+.+- ..++....| ..++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~--~~~~v~viD~~t~~~~~~i~~~~~p---~~i~ 90 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN--NSHVIFAIDINTFKEVGRITGFTSP---RYIH 90 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG--GGTEEEEEETTTCCEEEEEECCSSE---EEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc--CCCEEEEEECcccEEEEEcCCCCCC---cEEE
Confidence 4578999999988 2 2211 1 01111233332222 22222 244688889887764 233333222 2333
Q ss_pred E-ECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCC--CCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEE
Q 016328 119 Q-IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPRE--MAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVL 195 (391)
Q Consensus 119 ~-~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~y 195 (391)
. -++++||.... ...+.++|+.+.+-...-++... .......++..++++||..-. ..+.+.++
T Consensus 91 ~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-------~~~~v~vi 157 (328)
T 3dsm_A 91 FLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-------YQNRILKI 157 (328)
T ss_dssp EEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT-------TCCEEEEE
T ss_pred EeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC-------CCCEEEEE
Confidence 3 57899998743 25699999998865431111110 000122344489999998420 13678999
Q ss_pred eCCCCceEECCCC-CCCCCCceEEEECCEEEEEccCCCC--ccCCCccceEeeeecCCcccCCceeecCCCCCCcceeEE
Q 016328 196 DTETKKWQDLPPL-PVPRYAPATQLWRGRLHVMGGSGEN--RYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACV 272 (391)
Q Consensus 196 d~~~~~W~~~~~~-~~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~ 272 (391)
|+++.+....-+. ..|. ..+..-++++|+..-.... .+... ...++.+|+++.+....-.++.+......+
T Consensus 158 D~~t~~~~~~i~~g~~p~--~i~~~~dG~l~v~~~~~~~~~~~~~~----~~~v~~id~~t~~v~~~~~~~~g~~p~~la 231 (328)
T 3dsm_A 158 DTETDKVVDELTIGIQPT--SLVMDKYNKMWTITDGGYEGSPYGYE----APSLYRIDAETFTVEKQFKFKLGDWPSEVQ 231 (328)
T ss_dssp ETTTTEEEEEEECSSCBC--CCEECTTSEEEEEBCCBCTTCSSCBC----CCEEEEEETTTTEEEEEEECCTTCCCEEEE
T ss_pred ECCCCeEEEEEEcCCCcc--ceEEcCCCCEEEEECCCccCCccccC----CceEEEEECCCCeEEEEEecCCCCCceeEE
Confidence 9998875432111 1221 2222346888887632210 00000 012333457666655433344332222444
Q ss_pred EE--CCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCceeeEEE--ECCEEEEEc
Q 016328 273 VV--DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVL--VNNSIVIVG 347 (391)
Q Consensus 273 ~~--~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~~~--~~~~l~i~G 347 (391)
.. ++.||+..+ .++.+| .+.+.....-++.. .....++++ .++.||+..
T Consensus 232 ~~~d~~~lyv~~~-------------------------~v~~~d~~t~~~~~~~~~~~~-~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 232 LNGTRDTLYWINN-------------------------DIWRMPVEADRVPVRPFLEFR-DTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp ECTTSCEEEEESS-------------------------SEEEEETTCSSCCSSCSBCCC-SSCEEEEEECTTTCCEEEEE
T ss_pred EecCCCEEEEEcc-------------------------EEEEEECCCCceeeeeeecCC-CCceEEEEEcCCCCeEEEEc
Confidence 44 567888654 278888 66554221111211 111233344 367899986
Q ss_pred cccCCCCcccceeEecceEEEecC
Q 016328 348 GTTEKHPTTKKMVLVGEIFQFNLN 371 (391)
Q Consensus 348 G~~~~~~~~~~~~~~~~v~~~d~~ 371 (391)
..+... ...|++||++
T Consensus 286 ~~~y~~--------~~~V~v~d~~ 301 (328)
T 3dsm_A 286 AIDYQQ--------QGIVYRYSPQ 301 (328)
T ss_dssp CTTSSS--------EEEEEEECTT
T ss_pred cccccc--------CCEEEEECCC
Confidence 322111 1378899886
No 22
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.61 E-value=0.0093 Score=51.80 Aligned_cols=111 Identities=18% Similarity=0.119 Sum_probs=77.9
Q ss_pred EEccCCCCCccC--ceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCc
Q 016328 103 EKMKAAPVPRLD--GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQ 180 (391)
Q Consensus 103 ~~~~~~p~~r~~--~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~ 180 (391)
+.+...|..... +.+...++.+|+..|..+. +++.++|+++.+=...-+++. .-...+++..+++||+....
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~ 83 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPP--PYFGAGIVAWRDRLIQLTWR 83 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEESS
T ss_pred EEEEEcCCCCccccccEEEECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCC--CcceeEEEEeCCEEEEEEee
Confidence 334444544444 4667778999999997643 458899999998776555654 44567788899999998543
Q ss_pred cCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEcc
Q 016328 181 YGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGG 229 (391)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG 229 (391)
.+.++.||+++.+ .+...+.+..+.+++.-+++||+.-|
T Consensus 84 --------~~~v~v~D~~tl~--~~~ti~~~~~Gwglt~dg~~L~vSdg 122 (243)
T 3mbr_X 84 --------NHEGFVYDLATLT--PRARFRYPGEGWALTSDDSHLYMSDG 122 (243)
T ss_dssp --------SSEEEEEETTTTE--EEEEEECSSCCCEEEECSSCEEEECS
T ss_pred --------CCEEEEEECCcCc--EEEEEeCCCCceEEeeCCCEEEEECC
Confidence 4788999998755 33344444466777777788998865
No 23
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.49 E-value=0.062 Score=49.56 Aligned_cols=247 Identities=11% Similarity=0.070 Sum_probs=125.1
Q ss_pred hheecCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecCcccccccccccccccccccC--ceEE
Q 016328 29 FALVADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPEL--KWEK 104 (391)
Q Consensus 29 ~~~~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~--~W~~ 104 (391)
.++.++.+|+... + ..+..+|+++++ ...+.... ..+......+....+ .....++.+|+.+. .|+.
T Consensus 99 ~~~~~~~v~v~~~-~-----g~l~a~d~~tG~~~W~~~~~~~--~~~~p~~~~~~v~v~-~~~g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 99 VTVSGGHVYIGSE-K-----AQVYALNTSDGTVAWQTKVAGE--ALSRPVVSDGLVLIH-TSNGQLQALNEADGAVKWTV 169 (376)
T ss_dssp EEEETTEEEEEET-T-----SEEEEEETTTCCEEEEEECSSC--CCSCCEEETTEEEEE-CTTSEEEEEETTTCCEEEEE
T ss_pred ceEeCCEEEEEcC-C-----CEEEEEECCCCCEEEEEeCCCc--eEcCCEEECCEEEEE-cCCCeEEEEECCCCcEEEEE
Confidence 3456788888643 2 368899999887 33322111 011111112211111 11236788888665 4876
Q ss_pred ccCCCC--CccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCC---C---cceEEEEEeCCEE
Q 016328 105 MKAAPV--PRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREM---A---HSHLGMVTDGRYI 174 (391)
Q Consensus 105 ~~~~p~--~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~---~---r~~~~~~~~~~~i 174 (391)
-...+. .+...+.+..++.||+.. . ...+..||+.+.+ |+.-...+... . ......++.++.|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~v~~g~-~------~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v 242 (376)
T 3q7m_A 170 NLDMPSLSLRGESAPTTAFGAAVVGG-D------NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVV 242 (376)
T ss_dssp ECCC-----CCCCCCEEETTEEEECC-T------TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEE
T ss_pred eCCCCceeecCCCCcEEECCEEEEEc-C------CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEE
Confidence 433221 122234455678877732 2 1358899988764 77643322100 0 0123344568888
Q ss_pred EEEeCccCCCCCCCcceeEEEeCCCC--ceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcc
Q 016328 175 YVVTGQYGPQCRGPTAHTFVLDTETK--KWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPL 252 (391)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~ 252 (391)
|+.+. ...+.++|+++. .|+.-.. . ....++.++.||+..... .+..+ |+.
T Consensus 243 ~~~~~---------~g~l~~~d~~tG~~~w~~~~~--~---~~~~~~~~~~l~~~~~~g------~l~~~-------d~~ 295 (376)
T 3q7m_A 243 FALAY---------NGNLTALDLRSGQIMWKRELG--S---VNDFIVDGNRIYLVDQND------RVMAL-------TID 295 (376)
T ss_dssp EEECT---------TSCEEEEETTTCCEEEEECCC--C---EEEEEEETTEEEEEETTC------CEEEE-------ETT
T ss_pred EEEec---------CcEEEEEECCCCcEEeeccCC--C---CCCceEECCEEEEEcCCC------eEEEE-------ECC
Confidence 88642 245788999766 4775421 1 234556788999875311 12222 233
Q ss_pred c--CCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcC--cEEEcCCCCC
Q 016328 253 E--KEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEM--KWKVLPSMPK 327 (391)
Q Consensus 253 ~--~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~--~W~~v~~~~~ 327 (391)
+ ..|+... ++.. ...+.+..++.||+... + ..++.+| .+. .|+.- +..
T Consensus 296 tG~~~w~~~~-~~~~-~~~~~~~~~~~l~v~~~-~----------------------g~l~~~d~~tG~~~~~~~--~~~ 348 (376)
T 3q7m_A 296 GGVTLWTQSD-LLHR-LLTSPVLYNGNLVVGDS-E----------------------GYLHWINVEDGRFVAQQK--VDS 348 (376)
T ss_dssp TCCEEEEECT-TTTS-CCCCCEEETTEEEEECT-T----------------------SEEEEEETTTCCEEEEEE--CCT
T ss_pred CCcEEEeecc-cCCC-cccCCEEECCEEEEEeC-C----------------------CeEEEEECCCCcEEEEEe--cCC
Confidence 3 3476431 1111 12244567888887532 1 1388888 544 46542 211
Q ss_pred CCCCceeeEEEECCEEEEEc
Q 016328 328 PDSHIEFAWVLVNNSIVIVG 347 (391)
Q Consensus 328 ~~~~~~~~~~~~~~~l~i~G 347 (391)
... ....+..++.||+..
T Consensus 349 ~~~--~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 349 SGF--QTEPVAADGKLLIQA 366 (376)
T ss_dssp TCB--CSCCEEETTEEEEEB
T ss_pred Ccc--eeCCEEECCEEEEEe
Confidence 111 123356788988854
No 24
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.41 E-value=0.0013 Score=61.24 Aligned_cols=168 Identities=15% Similarity=0.110 Sum_probs=84.5
Q ss_pred CEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC-cccccccccccccccccccCceEEccCCCC
Q 016328 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
+++|+.|+.++ .+..||..+++ ..++... ...++.....+ ...........+..+|..+.+....-..+.
T Consensus 2 ~~l~vs~~~d~-----~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~ 74 (391)
T 1l0q_A 2 TFAYIANSESD-----NISVIDVTSNKVTATIPVGS--NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS 74 (391)
T ss_dssp EEEEEEETTTT-----EEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred CEEEEEcCCCC-----EEEEEECCCCeEEEEeecCC--CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC
Confidence 46788887665 68899998887 3333211 11222222122 111111123467778877665433222221
Q ss_pred CccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCCC
Q 016328 111 PRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCR 186 (391)
Q Consensus 111 ~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 186 (391)
.-.+++.. +..||+.+..+ ..+.+||+.+++-...-.... ....++.. +..||+.++.
T Consensus 75 --~v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~------ 136 (391)
T 1l0q_A 75 --SPQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTGK----SPLGLALSPDGKKLYVTNNG------ 136 (391)
T ss_dssp --SEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETT------
T ss_pred --CccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCCC----CcceEEECCCCCEEEEEeCC------
Confidence 12222222 34677765432 458999999876544322221 22344443 3467777653
Q ss_pred CCcceeEEEeCCCCceEECCCCCCCCCCceEEEE--CCEEEEEccC
Q 016328 187 GPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGS 230 (391)
Q Consensus 187 ~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~ 230 (391)
...+..||+.+.+....-... .....++.. ++.||+.++.
T Consensus 137 --~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 137 --DKTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp --TTEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETT
T ss_pred --CCEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCC
Confidence 357889999887654332211 111223322 3457777654
No 25
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.21 E-value=0.021 Score=49.55 Aligned_cols=164 Identities=17% Similarity=0.186 Sum_probs=98.6
Q ss_pred CCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCc
Q 016328 155 DMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENR 234 (391)
Q Consensus 155 ~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~ 234 (391)
..|.+..-+..++...++.||+..|..+ .+.+.++|+++.+=..--+++..-.+.+++..+++||+....++
T Consensus 14 ~~phd~~~ftqGL~~~~~~LyestG~~g------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~-- 85 (243)
T 3mbr_X 14 RYPHDTTAFTEGLFYLRGHLYESTGETG------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNH-- 85 (243)
T ss_dssp EEECCTTCCEEEEEEETTEEEEEECCTT------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSS--
T ss_pred EcCCCCccccccEEEECCEEEEECCCCC------CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCC--
Confidence 3444323455678888999999988765 46789999999876655566666666778889999999965432
Q ss_pred cCCCccceEeeeecCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc
Q 016328 235 YTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 314 (391)
...+|+ +++. +.+...+.+..+.+++.-+++||+.-|. +.++.+|
T Consensus 86 ---~v~v~D-------~~tl--~~~~ti~~~~~Gwglt~dg~~L~vSdgs-----------------------~~l~~iD 130 (243)
T 3mbr_X 86 ---EGFVYD-------LATL--TPRARFRYPGEGWALTSDDSHLYMSDGT-----------------------AVIRKLD 130 (243)
T ss_dssp ---EEEEEE-------TTTT--EEEEEEECSSCCCEEEECSSCEEEECSS-----------------------SEEEEEC
T ss_pred ---EEEEEE-------CCcC--cEEEEEeCCCCceEEeeCCCEEEEECCC-----------------------CeEEEEe
Confidence 233333 3333 3333322223344666667788887662 2488888
Q ss_pred -CcCcE-EEcC--CCCCCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCccc
Q 016328 315 -DEMKW-KVLP--SMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 315 -~~~~W-~~v~--~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~ 374 (391)
.+.+- ..+. ..+.+..... -+...+++||+-- +. . ++|.+.|+++..
T Consensus 131 p~t~~~~~~I~V~~~g~~~~~lN-eLe~~~G~lyanv-w~-s----------~~I~vIDp~tG~ 181 (243)
T 3mbr_X 131 PDTLQQVGSIKVTAGGRPLDNLN-ELEWVNGELLANV-WL-T----------SRIARIDPASGK 181 (243)
T ss_dssp TTTCCEEEEEECEETTEECCCEE-EEEEETTEEEEEE-TT-T----------TEEEEECTTTCB
T ss_pred CCCCeEEEEEEEccCCcccccce-eeEEeCCEEEEEE-CC-C----------CeEEEEECCCCC
Confidence 65432 2221 1122222211 2344588888432 21 1 379999998877
No 26
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.20 E-value=0.06 Score=50.88 Aligned_cols=262 Identities=13% Similarity=0.074 Sum_probs=122.3
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecCcccccccccccccccccccCceEEccCCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
++...+.|+.++ .+..||..+.+ ..+... ....-.....+.....+. ....+..+|..+.+-. ..+..
T Consensus 128 ~g~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~--~~~~~ 197 (445)
T 2ovr_B 128 CGNRIVSGSDDN-----TLKVWSAVTGKCLRTLVGH--TGGVWSSQMRDNIIISGS-TDRTLKVWNAETGECI--HTLYG 197 (445)
T ss_dssp ETTEEEEEETTS-----CEEEEETTTCCEEEECCCC--SSCEEEEEEETTEEEEEE-TTSCEEEEETTTTEEE--EEECC
T ss_pred cCCEEEEEECCC-----cEEEEECCCCcEEEEEcCC--CCCEEEEEecCCEEEEEe-CCCeEEEEECCcCcEE--EEECC
Confidence 445556666555 67788888777 333321 111111111122222221 2235666776655322 12222
Q ss_pred CccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcc
Q 016328 111 PRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTA 190 (391)
Q Consensus 111 ~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 190 (391)
....-.+...++..++.|+.+ ..+.+||..+.+-...-... .........++..++.|+.+ .
T Consensus 198 h~~~v~~~~~~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~----~~~v~~~~~~~~~l~~~~~d--------g 259 (445)
T 2ovr_B 198 HTSTVRCMHLHEKRVVSGSRD------ATLRVWDIETGQCLHVLMGH----VAAVRCVQYDGRRVVSGAYD--------F 259 (445)
T ss_dssp CSSCEEEEEEETTEEEEEETT------SEEEEEESSSCCEEEEEECC----SSCEEEEEECSSCEEEEETT--------S
T ss_pred CCCcEEEEEecCCEEEEEeCC------CEEEEEECCCCcEEEEEcCC----cccEEEEEECCCEEEEEcCC--------C
Confidence 222222333445556666654 35888998876533211111 11122233367777777654 3
Q ss_pred eeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCccee
Q 016328 191 HTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRA 270 (391)
Q Consensus 191 ~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~ 270 (391)
.+..||+.+.+- +..+......-.+...++..++.|+.++ .+..|++ .+.+ .+..+........
T Consensus 260 ~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~~~~d~-----~i~i~d~-------~~~~--~~~~~~~~~~~v~ 323 (445)
T 2ovr_B 260 MVKVWDPETETC--LHTLQGHTNRVYSLQFDGIHVVSGSLDT-----SIRVWDV-------ETGN--CIHTLTGHQSLTS 323 (445)
T ss_dssp CEEEEEGGGTEE--EEEECCCSSCEEEEEECSSEEEEEETTS-----CEEEEET-------TTCC--EEEEECCCCSCEE
T ss_pred EEEEEECCCCcE--eEEecCCCCceEEEEECCCEEEEEeCCC-----eEEEEEC-------CCCC--EEEEEcCCcccEE
Confidence 467788776542 2222211122233344777777777543 3555653 2222 1111111111223
Q ss_pred EEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCc-EEEcCCCCCCCCCceeeEEEECCEEEEEcc
Q 016328 271 CVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMK-WKVLPSMPKPDSHIEFAWVLVNNSIVIVGG 348 (391)
Q Consensus 271 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~-W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG 348 (391)
+...++..++.|+.++. +..+| .+.+ -..+.. +.... .....+..++.+++.|+
T Consensus 324 ~~~~~~~~l~~~~~dg~----------------------i~vwd~~~~~~~~~~~~-~~~~~-~~v~~~~~~~~~l~s~~ 379 (445)
T 2ovr_B 324 GMELKDNILVSGNADST----------------------VKIWDIKTGQCLQTLQG-PNKHQ-SAVTCLQFNKNFVITSS 379 (445)
T ss_dssp EEEEETTEEEEEETTSC----------------------EEEEETTTCCEEEEECS-TTSCS-SCEEEEEECSSEEEEEE
T ss_pred EEEEeCCEEEEEeCCCe----------------------EEEEECCCCcEEEEEcc-CCCCC-CCEEEEEECCCEEEEEe
Confidence 44455667777776532 66666 4432 222221 11111 12334566788888887
Q ss_pred ccCCCCcccceeEecceEEEecCccc
Q 016328 349 TTEKHPTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 349 ~~~~~~~~~~~~~~~~v~~~d~~~~~ 374 (391)
.++ .+..||..+.+
T Consensus 380 ~dg------------~v~iwd~~~~~ 393 (445)
T 2ovr_B 380 DDG------------TVKLWDLKTGE 393 (445)
T ss_dssp TTS------------EEEEEETTTCC
T ss_pred CCC------------eEEEEECCCCc
Confidence 653 46666665554
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.17 E-value=0.028 Score=49.33 Aligned_cols=113 Identities=10% Similarity=0.033 Sum_probs=76.0
Q ss_pred ceEEccCCCCCccC--ceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEe
Q 016328 101 KWEKMKAAPVPRLD--GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVT 178 (391)
Q Consensus 101 ~W~~~~~~p~~r~~--~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~G 178 (391)
.++.+...|..+.. ..+...++.+|+..|..+ .+.+.++|+++.+=...-+++. .-...+++..+++||+.-
T Consensus 30 ~~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 30 DYQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGK--RYFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEEEEEECCTTCEEEEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCT--TCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEecCCCCcccceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCC--ccceeEEEEeCCEEEEEE
Confidence 44555555544444 445556899999999754 2458899999998665444543 334567888999999995
Q ss_pred CccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEcc
Q 016328 179 GQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGG 229 (391)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG 229 (391)
.. .+.++.||+++.+-. ...+.+-.+.+++.-++.||+.-|
T Consensus 104 w~--------~~~v~v~D~~t~~~~--~ti~~~~eG~glt~dg~~L~~SdG 144 (262)
T 3nol_A 104 WK--------NGLGFVWNIRNLRQV--RSFNYDGEGWGLTHNDQYLIMSDG 144 (262)
T ss_dssp SS--------SSEEEEEETTTCCEE--EEEECSSCCCCEEECSSCEEECCS
T ss_pred ee--------CCEEEEEECccCcEE--EEEECCCCceEEecCCCEEEEECC
Confidence 42 478899999886633 333333455667766777888754
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.023 Score=51.88 Aligned_cols=95 Identities=8% Similarity=0.019 Sum_probs=49.7
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE--C--CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--K--NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~ 166 (391)
.+..+|.....+..+..+......-..+.+ + +.+++.|+.+ ..+.+||..+++|..+..+... ...-.+
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~-~~~v~~ 106 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQIAVHAVH-SASVNS 106 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC------CEEEEEEcCCCceeEeeeecCC-CcceEE
Confidence 344555554444443333322222222222 2 5667777664 2488899999888775544331 112233
Q ss_pred EEEe-C--CEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 167 MVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 167 ~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
++.. + +.+++.|+.+ ..+..||..+.
T Consensus 107 ~~~~~~~~~~~l~~~~~d--------~~i~v~d~~~~ 135 (379)
T 3jrp_A 107 VQWAPHEYGPLLLVASSD--------GKVSVVEFKEN 135 (379)
T ss_dssp EEECCGGGCSEEEEEETT--------SEEEEEECCTT
T ss_pred EEeCCCCCCCEEEEecCC--------CcEEEEecCCC
Confidence 3333 2 5566776643 45677888765
No 29
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.85 E-value=0.24 Score=44.82 Aligned_cols=145 Identities=6% Similarity=-0.010 Sum_probs=65.9
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe----eecCCCCCCCCceeeEeecC-cccccccccccccccccccCceEEccC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS----IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKA 107 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~----~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (391)
++.++++|+.++ .+..||..+++ ..+.. ....-..+.....+ ....+. ....+..+|..+.++.....
T Consensus 19 ~~~~l~~~~~d~-----~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~ 91 (372)
T 1k8k_C 19 DRTQIAICPNNH-----EVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGRTWKPTLV 91 (372)
T ss_dssp TSSEEEEECSSS-----EEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETTEEEEEEE
T ss_pred CCCEEEEEeCCC-----EEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCCeeeeeEE
Confidence 556667776554 67778877763 22221 11111122221111 111111 22356777877776654433
Q ss_pred CCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCC-eeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCC
Q 016328 108 APVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGP 183 (391)
Q Consensus 108 ~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~ 183 (391)
+.........+.+ ++..+++|+.+ ..+.+||..+.+ |.....+..+....-.+++.. ++.+++.|+.+
T Consensus 92 ~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 163 (372)
T 1k8k_C 92 ILRINRAARCVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-- 163 (372)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT--
T ss_pred eecCCCceeEEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC--
Confidence 2222222222222 45666676654 236666666543 332222111111122233332 56677777653
Q ss_pred CCCCCcceeEEEeCC
Q 016328 184 QCRGPTAHTFVLDTE 198 (391)
Q Consensus 184 ~~~~~~~~~~~yd~~ 198 (391)
..+..||..
T Consensus 164 ------g~i~~~d~~ 172 (372)
T 1k8k_C 164 ------FKCRIFSAY 172 (372)
T ss_dssp ------SCEEEEECC
T ss_pred ------CCEEEEEcc
Confidence 346678854
No 30
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.79 E-value=0.075 Score=50.11 Aligned_cols=212 Identities=13% Similarity=0.050 Sum_probs=99.6
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecCcccccccccccccccccccCceEEccCCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
++..++.|+.++ .+..||..+.+ ..+... ....-.....+.....+. ....+..+|..+.+-.. .+..
T Consensus 142 d~~~l~~g~~dg-----~i~iwd~~~~~~~~~~~~h--~~~v~~l~~~~~~l~sg~-~dg~i~vwd~~~~~~~~--~~~~ 211 (435)
T 1p22_A 142 DDQKIVSGLRDN-----TIKIWDKNTLECKRILTGH--TGSVLCLQYDERVIITGS-SDSTVRVWDVNTGEMLN--TLIH 211 (435)
T ss_dssp CSSEEEEEESSS-----CEEEEESSSCCEEEEECCC--SSCEEEEECCSSEEEEEE-TTSCEEEEESSSCCEEE--EECC
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeEEEEEcCC--CCcEEEEEECCCEEEEEc-CCCeEEEEECCCCcEEE--EEcC
Confidence 566677777665 67788888776 333321 111111111111222221 22356677766654322 2222
Q ss_pred CccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeC-CCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCc
Q 016328 111 PRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPT 189 (391)
Q Consensus 111 ~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 189 (391)
....-......+..++.|+.+ ..+.+||..+.+-... ..+... ...-.++.. ++..++.|+.+
T Consensus 212 h~~~v~~l~~~~~~l~s~s~d------g~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~-~~~~l~s~~~d-------- 275 (435)
T 1p22_A 212 HCEAVLHLRFNNGMMVTCSKD------RSIAVWDMASPTDITLRRVLVGH-RAAVNVVDF-DDKYIVSASGD-------- 275 (435)
T ss_dssp CCSCEEEEECCTTEEEEEETT------SCEEEEECSSSSCCEEEEEECCC-SSCEEEEEE-ETTEEEEEETT--------
T ss_pred CCCcEEEEEEcCCEEEEeeCC------CcEEEEeCCCCCCceeeeEecCC-CCcEEEEEe-CCCEEEEEeCC--------
Confidence 222223334455567777654 3478889876542211 111110 111223333 55556666543
Q ss_pred ceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCcce
Q 016328 190 AHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHR 269 (391)
Q Consensus 190 ~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~ 269 (391)
..+..||..+.+-.. .+......-.+...++.+++.|+.++ .+..|++ .+.+ .+..+.......
T Consensus 276 g~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~-------~~~~--~~~~~~~h~~~v 339 (435)
T 1p22_A 276 RTIKVWNTSTCEFVR--TLNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDI-------ECGA--CLRVLEGHEELV 339 (435)
T ss_dssp SEEEEEETTTCCEEE--EEECCSSCEEEEEEETTEEEEEETTS-----CEEEEET-------TTCC--EEEEECCCSSCE
T ss_pred CeEEEEECCcCcEEE--EEcCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEEC-------CCCC--EEEEEeCCcCcE
Confidence 457789987764321 11111122233344666777777543 3555653 2221 222221111123
Q ss_pred eEEEECCEEEEEeCCCC
Q 016328 270 ACVVVDDRLLVIGGQEG 286 (391)
Q Consensus 270 ~~~~~~~~i~v~GG~~~ 286 (391)
.++..++..++.|+.++
T Consensus 340 ~~~~~~~~~l~sg~~dg 356 (435)
T 1p22_A 340 RCIRFDNKRIVSGAYDG 356 (435)
T ss_dssp EEEECCSSEEEEEETTS
T ss_pred EEEEecCCEEEEEeCCC
Confidence 44556888888888654
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.69 E-value=0.2 Score=44.04 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=69.8
Q ss_pred eEEccCCCCCccC--ceEEEEC-CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEe
Q 016328 102 WEKMKAAPVPRLD--GAAIQIK-NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVT 178 (391)
Q Consensus 102 W~~~~~~p~~r~~--~~~~~~~-~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~G 178 (391)
.+.+...|..... +.+...+ +.+|+..|..+ .+.+.++|+.+++=...-+++. .....+++..+++||+..
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~~g~~lyv~t 82 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDD--SYFGEGLTLLNEKLYQVV 82 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCT--TCCEEEEEEETTEEEEEE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCC--CcceEEEEEeCCEEEEEE
Confidence 4444545544332 4555555 79999887532 2469999999988655333433 234457788899999985
Q ss_pred CccCCCCCCCcceeEEEeCCCCceEECCCCCCC-CCCceEEEECCEEEEEcc
Q 016328 179 GQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVP-RYAPATQLWRGRLHVMGG 229 (391)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~~~~~iyv~GG 229 (391)
-. .+.++.||+.+.+ .+...+.+ ..+.+++.-++++|+.-|
T Consensus 83 ~~--------~~~v~viD~~t~~--v~~~i~~g~~~g~glt~Dg~~l~vs~g 124 (266)
T 2iwa_A 83 WL--------KNIGFIYDRRTLS--NIKNFTHQMKDGWGLATDGKILYGSDG 124 (266)
T ss_dssp TT--------CSEEEEEETTTTE--EEEEEECCSSSCCEEEECSSSEEEECS
T ss_pred ec--------CCEEEEEECCCCc--EEEEEECCCCCeEEEEECCCEEEEECC
Confidence 32 4778999998754 33333222 234445555677888754
No 32
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.67 E-value=0.028 Score=49.24 Aligned_cols=156 Identities=14% Similarity=0.127 Sum_probs=90.6
Q ss_pred ceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccce
Q 016328 163 SHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHW 242 (391)
Q Consensus 163 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 242 (391)
+..++...++.||+..|..+ .+.+.++|+++.+=..--+++..-.+.+++..+++||+....++ ...+|
T Consensus 44 ftqGL~~~~~~LyestG~~g------~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~-----~v~v~ 112 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNG------RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNG-----LGFVW 112 (262)
T ss_dssp EEEEEEEETTEEEEEEEETT------EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSS-----EEEEE
T ss_pred ccceEEEECCEEEEECCCCC------CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCC-----EEEEE
Confidence 34566667999999988655 46789999999875544455544455667889999999965432 23333
Q ss_pred EeeeecCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCc-EE
Q 016328 243 SLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMK-WK 320 (391)
Q Consensus 243 ~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~-W~ 320 (391)
+ +++.+-. ...+.+..+.+.+.-+++||+.-|. +.++.+| .+.+ -.
T Consensus 113 D-------~~t~~~~--~ti~~~~eG~glt~dg~~L~~SdGs-----------------------~~i~~iDp~T~~v~~ 160 (262)
T 3nol_A 113 N-------IRNLRQV--RSFNYDGEGWGLTHNDQYLIMSDGT-----------------------PVLRFLDPESLTPVR 160 (262)
T ss_dssp E-------TTTCCEE--EEEECSSCCCCEEECSSCEEECCSS-----------------------SEEEEECTTTCSEEE
T ss_pred E-------CccCcEE--EEEECCCCceEEecCCCEEEEECCC-----------------------CeEEEEcCCCCeEEE
Confidence 3 4443332 2222222333555556678887652 2488888 5543 22
Q ss_pred EcCC--CCCCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCccc
Q 016328 321 VLPS--MPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 321 ~v~~--~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~ 374 (391)
.++- ...|..... -+...+++||+-- +. . ++|.+.|+++.+
T Consensus 161 ~I~V~~~g~~~~~lN-ELe~~~G~lyan~-w~-~----------~~I~vIDp~tG~ 203 (262)
T 3nol_A 161 TITVTAHGEELPELN-ELEWVDGEIFANV-WQ-T----------NKIVRIDPETGK 203 (262)
T ss_dssp EEECEETTEECCCEE-EEEEETTEEEEEE-TT-S----------SEEEEECTTTCB
T ss_pred EEEeccCCccccccc-eeEEECCEEEEEE-cc-C----------CeEEEEECCCCc
Confidence 2221 111212111 1234588888522 11 1 379999998877
No 33
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.61 E-value=0.13 Score=48.10 Aligned_cols=153 Identities=6% Similarity=-0.029 Sum_probs=72.0
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-ee-cCC---CCCCCC-ceeeEeecCcccccccccccccccccccCceEEcc
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-II-LPN---NGPQKG-ENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMK 106 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~-lp~---~~~r~~-~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 106 (391)
++.+++.++.++ .+..||+.+++ .. ++. ..+... .++.....+...........+..+|..+.+....
T Consensus 133 ~~~~~~~~~~~~-----~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~- 206 (433)
T 3bws_A 133 NTRLAIPLLEDE-----GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT- 206 (433)
T ss_dssp SSEEEEEBTTSS-----SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE-
T ss_pred CCeEEEEeCCCC-----eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE-
Confidence 678888876544 57889998887 33 222 111111 1112111111111111223567777766543221
Q ss_pred CCCCCccC-ceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccC
Q 016328 107 AAPVPRLD-GAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYG 182 (391)
Q Consensus 107 ~~p~~r~~-~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~ 182 (391)
++..... .+++.. ++.+|+.+..+ ..+.+||+.+.+....-.... ....++.. +++.+++++...
T Consensus 207 -~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~~g~~l~~~~~~~ 275 (433)
T 3bws_A 207 -VDLTGKWSKILLYDPIRDLVYCSNWIS------EDISVIDRKTKLEIRKTDKIG----LPRGLLLSKDGKELYIAQFSA 275 (433)
T ss_dssp -EECSSSSEEEEEEETTTTEEEEEETTT------TEEEEEETTTTEEEEECCCCS----EEEEEEECTTSSEEEEEEEES
T ss_pred -EcCCCCCeeEEEEcCCCCEEEEEecCC------CcEEEEECCCCcEEEEecCCC----CceEEEEcCCCCEEEEEECCC
Confidence 1111111 222222 44677776543 358999998876544322221 12333332 443444444322
Q ss_pred CCCCCCcceeEEEeCCCCce
Q 016328 183 PQCRGPTAHTFVLDTETKKW 202 (391)
Q Consensus 183 ~~~~~~~~~~~~yd~~~~~W 202 (391)
.........+..||+.+.+-
T Consensus 276 ~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 276 SNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp CTTCSCCEEEEEEETTTTEE
T ss_pred CccccCCCeEEEEECCCCcE
Confidence 21100135788999987754
No 34
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.61 E-value=0.079 Score=46.48 Aligned_cols=105 Identities=11% Similarity=0.076 Sum_probs=71.7
Q ss_pred cCCCCCccC--ceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCC
Q 016328 106 KAAPVPRLD--GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGP 183 (391)
Q Consensus 106 ~~~p~~r~~--~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~ 183 (391)
...|..+.. ..+...++.+|+..|..+ .+.++|+++.+=...- ++. .-...+++..+++||+....
T Consensus 47 ~~~phd~~~ftqGL~~~~~~Ly~stG~~g------~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~~g~~Ly~ltw~--- 114 (268)
T 3nok_A 47 REYPHATNAFTQGLVFHQGHFFESTGHQG------TLRQLSLESAQPVWME-RLG--NIFAEGLASDGERLYQLTWT--- 114 (268)
T ss_dssp EEEECCTTCCEEEEEEETTEEEEEETTTT------EEEECCSSCSSCSEEE-ECT--TCCEEEEEECSSCEEEEESS---
T ss_pred EEEcCCCccccceEEEECCEEEEEcCCCC------EEEEEECCCCcEEeEE-CCC--CcceeEEEEeCCEEEEEEcc---
Confidence 334444443 455666899999999753 2889999998765533 543 33456788889999998543
Q ss_pred CCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEcc
Q 016328 184 QCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGG 229 (391)
Q Consensus 184 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG 229 (391)
.+.++.||+++.+-. ...+.+..+.+++.-+++||+.-|
T Consensus 115 -----~~~v~V~D~~Tl~~~--~ti~~~~eGwGLt~Dg~~L~vSdG 153 (268)
T 3nok_A 115 -----EGLLFTWSGMPPQRE--RTTRYSGEGWGLCYWNGKLVRSDG 153 (268)
T ss_dssp -----SCEEEEEETTTTEEE--EEEECSSCCCCEEEETTEEEEECS
T ss_pred -----CCEEEEEECCcCcEE--EEEeCCCceeEEecCCCEEEEECC
Confidence 477899999876533 333334446677778889999865
No 35
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.59 E-value=0.22 Score=46.93 Aligned_cols=211 Identities=13% Similarity=0.070 Sum_probs=98.1
Q ss_pred CEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecCcccccccccccccccccccCceEEccCCCCC
Q 016328 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPVP 111 (391)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 111 (391)
+.+++.|+.++ .+..||..+++ ..+... ..........+.....+. ....+..+|..+.+-.. .+...
T Consensus 169 ~~~l~s~~~dg-----~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~~~~l~s~s-~dg~i~~wd~~~~~~~~--~~~~~ 238 (445)
T 2ovr_B 169 DNIIISGSTDR-----TLKVWNAETGECIHTLYGH--TSTVRCMHLHEKRVVSGS-RDATLRVWDIETGQCLH--VLMGH 238 (445)
T ss_dssp TTEEEEEETTS-----CEEEEETTTTEEEEEECCC--SSCEEEEEEETTEEEEEE-TTSEEEEEESSSCCEEE--EEECC
T ss_pred CCEEEEEeCCC-----eEEEEECCcCcEEEEECCC--CCcEEEEEecCCEEEEEe-CCCEEEEEECCCCcEEE--EEcCC
Confidence 44666676555 67888988877 333321 111111111111111111 22356666666543221 11111
Q ss_pred ccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcce
Q 016328 112 RLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAH 191 (391)
Q Consensus 112 r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 191 (391)
.....+...++..++.|+.+ ..+.+||+.+.+-.. .+... ...-.++. .++..++.|+.+ ..
T Consensus 239 ~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~--~~~~~-~~~v~~~~-~~~~~l~~~~~d--------~~ 300 (445)
T 2ovr_B 239 VAAVRCVQYDGRRVVSGAYD------FMVKVWDPETETCLH--TLQGH-TNRVYSLQ-FDGIHVVSGSLD--------TS 300 (445)
T ss_dssp SSCEEEEEECSSCEEEEETT------SCEEEEEGGGTEEEE--EECCC-SSCEEEEE-ECSSEEEEEETT--------SC
T ss_pred cccEEEEEECCCEEEEEcCC------CEEEEEECCCCcEeE--EecCC-CCceEEEE-ECCCEEEEEeCC--------Ce
Confidence 22223344477777777764 247888887654322 12211 11122333 366667777653 34
Q ss_pred eEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCce-eecCCCCCCccee
Q 016328 192 TFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWR-TEIPIPRGGPHRA 270 (391)
Q Consensus 192 ~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~~~~~~ 270 (391)
+..||..+.+-.. .+........+...++.+++.|+.++ .+..|++ .+.+-. .+...........
T Consensus 301 i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~dg-----~i~vwd~-------~~~~~~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 301 IRVWDVETGNCIH--TLTGHQSLTSGMELKDNILVSGNADS-----TVKIWDI-------KTGQCLQTLQGPNKHQSAVT 366 (445)
T ss_dssp EEEEETTTCCEEE--EECCCCSCEEEEEEETTEEEEEETTS-----CEEEEET-------TTCCEEEEECSTTSCSSCEE
T ss_pred EEEEECCCCCEEE--EEcCCcccEEEEEEeCCEEEEEeCCC-----eEEEEEC-------CCCcEEEEEccCCCCCCCEE
Confidence 6788987765321 11111112223334555667776543 3555653 222211 1111111112234
Q ss_pred EEEECCEEEEEeCCCC
Q 016328 271 CVVVDDRLLVIGGQEG 286 (391)
Q Consensus 271 ~~~~~~~i~v~GG~~~ 286 (391)
++..++..++.|+.++
T Consensus 367 ~~~~~~~~l~s~~~dg 382 (445)
T 2ovr_B 367 CLQFNKNFVITSSDDG 382 (445)
T ss_dssp EEEECSSEEEEEETTS
T ss_pred EEEECCCEEEEEeCCC
Confidence 5566778888887653
No 36
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.57 E-value=0.12 Score=48.01 Aligned_cols=93 Identities=3% Similarity=-0.073 Sum_probs=46.7
Q ss_pred cccccccccCceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD 170 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~ 170 (391)
.+..+|..+.+-.. .+............++.+++.|+.+ ..+.+||.....-... .+... ...-.+++..
T Consensus 157 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~-~~~~~-~~~v~~~~~~ 226 (401)
T 4aez_A 157 LVDIYDVESQTKLR--TMAGHQARVGCLSWNRHVLSSGSRS------GAIHHHDVRIANHQIG-TLQGH-SSEVCGLAWR 226 (401)
T ss_dssp CEEEEETTTCCEEE--EECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTSSSCEEE-EEECC-SSCEEEEEEC
T ss_pred eEEEEECcCCeEEE--EecCCCCceEEEEECCCEEEEEcCC------CCEEEEecccCcceee-EEcCC-CCCeeEEEEc
Confidence 56667766554322 1222222233344466677777654 3588899874331111 11110 1112233332
Q ss_pred -CCEEEEEeCccCCCCCCCcceeEEEeCCCCc
Q 016328 171 -GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (391)
Q Consensus 171 -~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (391)
++.+++.|+.+ ..+..||..+.+
T Consensus 227 ~~~~~l~s~~~d--------~~v~iwd~~~~~ 250 (401)
T 4aez_A 227 SDGLQLASGGND--------NVVQIWDARSSI 250 (401)
T ss_dssp TTSSEEEEEETT--------SCEEEEETTCSS
T ss_pred CCCCEEEEEeCC--------CeEEEccCCCCC
Confidence 56677777753 357788987754
No 37
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.56 E-value=0.15 Score=45.96 Aligned_cols=99 Identities=10% Similarity=0.002 Sum_probs=50.3
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
+++.++.|+.+ ..+.+||..+.+-...-... ...-.+++. -++++++.|+.+ ..+..||..+
T Consensus 133 dg~~l~~g~~d------g~v~i~~~~~~~~~~~~~~~---~~~v~~~~~spdg~~lasg~~d--------g~i~iwd~~~ 195 (321)
T 3ow8_A 133 DSQYLATGTHV------GKVNIFGVESGKKEYSLDTR---GKFILSIAYSPDGKYLASGAID--------GIINIFDIAT 195 (321)
T ss_dssp TSSEEEEECTT------SEEEEEETTTCSEEEEEECS---SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCceeEEecCC---CceEEEEEECCCCCEEEEEcCC--------CeEEEEECCC
Confidence 55667777653 34788888766533211111 111223333 356777777654 3467889887
Q ss_pred CceEECCCCCC-CCCCceEE-EECCEEEEEccCCCCccCCCccceE
Q 016328 200 KKWQDLPPLPV-PRYAPATQ-LWRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 200 ~~W~~~~~~~~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
.+-.. .+.. ...-.+++ .-++++++.|+.++ .+..|+
T Consensus 196 ~~~~~--~~~~h~~~v~~l~~spd~~~l~s~s~dg-----~i~iwd 234 (321)
T 3ow8_A 196 GKLLH--TLEGHAMPIRSLTFSPDSQLLVTASDDG-----YIKIYD 234 (321)
T ss_dssp TEEEE--EECCCSSCCCEEEECTTSCEEEEECTTS-----CEEEEE
T ss_pred CcEEE--EEcccCCceeEEEEcCCCCEEEEEcCCC-----eEEEEE
Confidence 65321 1111 11112222 23667777777543 355665
No 38
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.036 Score=56.69 Aligned_cols=95 Identities=8% Similarity=0.019 Sum_probs=51.5
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE--C--CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--K--NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~ 166 (391)
.+..+|....++..+..+......-..+.+ + +..++.|+.+ ..+.+||..+++|..+..+... ...-.+
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~~~~~~~~~~~~~~h-~~~V~~ 104 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKEENGRWSQIAVHAVH-SASVNS 104 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEEETTEEEEEEEECCC-SSCEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEECCCCcccccccccCC-CCCeEE
Confidence 455555554455544443332222222332 2 5677777764 3488899988888765544331 112223
Q ss_pred EEEe-C--CEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 167 MVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 167 ~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
++.. + +.+++.|+.+ ..+..||..+.
T Consensus 105 v~~sp~~~~~~l~sgs~d--------g~I~vwdl~~~ 133 (753)
T 3jro_A 105 VQWAPHEYGPLLLVASSD--------GKVSVVEFKEN 133 (753)
T ss_dssp EEECCGGGCSEEEEEETT--------SEEEEEECCSS
T ss_pred EEECCCCCCCEEEEEeCC--------CcEEEEEeecC
Confidence 3333 3 5677777653 45677887765
No 39
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.50 E-value=0.43 Score=44.95 Aligned_cols=23 Identities=4% Similarity=0.120 Sum_probs=16.3
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (391)
++.+.+.|+.++ .+..||..+.+
T Consensus 131 ~~~~l~sgs~dg-----~i~vwd~~~~~ 153 (464)
T 3v7d_B 131 EDNYVITGADDK-----MIRVYDSINKK 153 (464)
T ss_dssp ETTEEEEEETTS-----CEEEEETTTTE
T ss_pred CCCEEEEEcCCC-----cEEEEECCCCc
Confidence 555666676555 67888988877
No 40
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.43 E-value=0.3 Score=42.13 Aligned_cols=172 Identities=14% Similarity=0.071 Sum_probs=80.8
Q ss_pred cCEEEE-ecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEeecCcccccccccccccccccccCceEEccCCCC
Q 016328 33 ADFFWA-SSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 33 ~~~ly~-~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
++.+|+ ..... +.+..||+.+.. ...+........+++....+...-... ...+..||+.............
T Consensus 34 ~g~l~v~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~ 107 (270)
T 1rwi_B 34 AGNVYVTSEGMY-----GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGL 107 (270)
T ss_dssp TCCEEEEECSSS-----CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSC
T ss_pred CCCEEEEccCCC-----CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCc
Confidence 567888 53322 356788887766 433322111223333322221111111 3467788877765443321111
Q ss_pred CccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCC
Q 016328 111 PRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGP 188 (391)
Q Consensus 111 ~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 188 (391)
..-.+++.. ++++|+.... ...+.+||..+........... ....+++.. +++||+....
T Consensus 108 -~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~-------- 169 (270)
T 1rwi_B 108 -NYPEGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGL---NDPDGVAVDNSGNVYVTDTD-------- 169 (270)
T ss_dssp -SSEEEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSC---CSCCCEEECTTCCEEEEEGG--------
T ss_pred -CCCcceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccccC---CCceeEEEeCCCCEEEEECC--------
Confidence 111233332 5678887543 2358888876655443321111 111234443 5789987532
Q ss_pred cceeEEEeCCCCceEECCCCCCCCCCceEEEE-CCEEEEEcc
Q 016328 189 TAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGG 229 (391)
Q Consensus 189 ~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG 229 (391)
...+.+||+.+..-........ ..-..++.. ++.||+...
T Consensus 170 ~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 170 NNRVVKLEAESNNQVVLPFTDI-TAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp GTEEEEECTTTCCEEECCCSSC-CSEEEEEECTTCCEEEEET
T ss_pred CCEEEEEecCCCceEeecccCC-CCceEEEECCCCCEEEEEC
Confidence 3578899998776544321111 111233332 457888753
No 41
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.41 E-value=0.19 Score=44.71 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=49.0
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++++++.|+.+ ..+.+||..+.+-... +... ...-.+++. .++.+++.|+.+ ..+..||+.+
T Consensus 76 ~~~~l~s~~~d------~~i~vwd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~ 138 (312)
T 4ery_A 76 DSNLLVSASDD------KTLKIWDVSSGKCLKT--LKGH-SNYVFCCNFNPQSNLIVSGSFD--------ESVRIWDVKT 138 (312)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCEEEE--EECC-SSCEEEEEECSSSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEECCC------CEEEEEECCCCcEEEE--EcCC-CCCEEEEEEcCCCCEEEEEeCC--------CcEEEEECCC
Confidence 45667777654 3588899887653321 1110 111122222 245667777654 3467889877
Q ss_pred CceEECCCCCCCCCCceEEE--ECCEEEEEccCCCCccCCCccceE
Q 016328 200 KKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 200 ~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
.+-.. .++.....-.... -++++++.|+.++ .+..|+
T Consensus 139 ~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd 177 (312)
T 4ery_A 139 GKCLK--TLPAHSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWD 177 (312)
T ss_dssp CCEEE--EECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CEEEE--EecCCCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEE
Confidence 65321 1111111111222 2566777776543 355555
No 42
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.34 E-value=0.08 Score=47.47 Aligned_cols=98 Identities=8% Similarity=0.007 Sum_probs=46.5
Q ss_pred cccccccc--cCceEEccCCCCCccCceEEEE-C-CEEEEEeccCCCCCCcceeEEEECCCC-CeeeCCCCCCCCCcceE
Q 016328 91 TFQDLPAP--ELKWEKMKAAPVPRLDGAAIQI-K-NLLYVFAGYGSIDYVHSHVDIYNFTDN-TWGGRFDMPREMAHSHL 165 (391)
Q Consensus 91 ~~~~~d~~--~~~W~~~~~~p~~r~~~~~~~~-~-~~vyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~~~r~~~ 165 (391)
.+..|+.. +.+++.+..++.+..-..++.. + ..+|+.+..+ ..+.+||+... ..+....++.. ....
T Consensus 61 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~--~~~~ 132 (343)
T 1ri6_A 61 RVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGL--DGCH 132 (343)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCC--TTBC
T ss_pred eEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCC--CCce
Confidence 45555554 6677665544332222233322 3 3566665322 34777877322 22222222221 1112
Q ss_pred EEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCCC-CceEE
Q 016328 166 GMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTET-KKWQD 204 (391)
Q Consensus 166 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~-~~W~~ 204 (391)
.++. .+..||+.+.. ...+..||..+ .+...
T Consensus 133 ~~~~s~dg~~l~~~~~~--------~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 133 SANISPDNRTLWVPALK--------QDRICLFTVSDDGHLVA 166 (343)
T ss_dssp CCEECTTSSEEEEEEGG--------GTEEEEEEECTTSCEEE
T ss_pred EEEECCCCCEEEEecCC--------CCEEEEEEecCCCceee
Confidence 2333 24467776522 35688899887 55543
No 43
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.33 E-value=0.12 Score=48.19 Aligned_cols=97 Identities=14% Similarity=0.098 Sum_probs=53.3
Q ss_pred cccccccccCceEEccCCC---CCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceE
Q 016328 91 TFQDLPAPELKWEKMKAAP---VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHL 165 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p---~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~ 165 (391)
.+..+|..+.+.....+.. .+......+.+ ++.+|+.++.+ ..+.+||+.+.+-...-.... ..-.
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~~~---~~~~ 215 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDLTG---KWSK 215 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEECSS---SSEE
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcCCC---CCee
Confidence 5778888776655432221 11111122333 67888888753 458899998765433211111 1122
Q ss_pred EEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEE
Q 016328 166 GMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD 204 (391)
Q Consensus 166 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~ 204 (391)
+++.. +..+|+.++. ...+.+||+.+.+...
T Consensus 216 ~~~~~~~~~~l~~~~~~--------~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNWI--------SEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEETTTTEEEEEETT--------TTEEEEEETTTTEEEE
T ss_pred EEEEcCCCCEEEEEecC--------CCcEEEEECCCCcEEE
Confidence 33333 4567777653 2468899998776543
No 44
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.27 E-value=0.17 Score=44.51 Aligned_cols=155 Identities=12% Similarity=0.038 Sum_probs=86.4
Q ss_pred eEEEEEeC-CEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccce
Q 016328 164 HLGMVTDG-RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHW 242 (391)
Q Consensus 164 ~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 242 (391)
.++++..+ +.||+..|..+ .+.+..+|+++.+=...-+++.......++..+++||+..-.++ ...++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~-----~v~vi 91 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG------RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKN-----IGFIY 91 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT------TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCS-----EEEEE
T ss_pred cccEEEeCCCeEEEECCCCC------CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCC-----EEEEE
Confidence 45676665 89999877432 47799999999875443334443344567778999999964322 23333
Q ss_pred EeeeecCCcccCCceeecCCCCC-CcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCc-E
Q 016328 243 SLAVKDGKPLEKEWRTEIPIPRG-GPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMK-W 319 (391)
Q Consensus 243 ~~~~~~~d~~~~~W~~~~~~p~~-~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~-W 319 (391)
+ +++. +.+...+.+ ..+.+.+.-++++|+..|. +.++.+| .+.+ -
T Consensus 92 D-------~~t~--~v~~~i~~g~~~g~glt~Dg~~l~vs~gs-----------------------~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 92 D-------RRTL--SNIKNFTHQMKDGWGLATDGKILYGSDGT-----------------------SILYEIDPHTFKLI 139 (266)
T ss_dssp E-------TTTT--EEEEEEECCSSSCCEEEECSSSEEEECSS-----------------------SEEEEECTTTCCEE
T ss_pred E-------CCCC--cEEEEEECCCCCeEEEEECCCEEEEECCC-----------------------CeEEEEECCCCcEE
Confidence 2 3332 222222221 2233444445678887542 2488888 5533 2
Q ss_pred EEcCC--CCCCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCccc
Q 016328 320 KVLPS--MPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 320 ~~v~~--~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~ 374 (391)
..++- .+.|..... .+...+++||+--..+ ++|.+.|+++++
T Consensus 140 ~~I~Vg~~~~p~~~~n-ele~~dg~lyvn~~~~------------~~V~vID~~tg~ 183 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLN-ELEYINGEVWANIWQT------------DCIARISAKDGT 183 (266)
T ss_dssp EEEECEETTEECCCEE-EEEEETTEEEEEETTS------------SEEEEEETTTCC
T ss_pred EEEEECCCCcccccce-eEEEECCEEEEecCCC------------CeEEEEECCCCc
Confidence 22221 112222221 2233488888653221 389999999888
No 45
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.18 E-value=0.046 Score=50.40 Aligned_cols=144 Identities=15% Similarity=0.118 Sum_probs=74.5
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC-cccccccccccccccccccCceEEccCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAP 109 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 109 (391)
+.++|+.|+.++ .+..||+.+++ ..++... ...++.....+ ...........+..+|..+++-...-..
T Consensus 43 g~~l~~~~~~d~-----~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~- 114 (391)
T 1l0q_A 43 GTKVYVANAHSN-----DVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT- 114 (391)
T ss_dssp SSEEEEEEGGGT-----EEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-
T ss_pred CCEEEEECCCCC-----eEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC-
Confidence 346777776444 67889998887 3333211 11122221111 1111111224677888877654332221
Q ss_pred CCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCC
Q 016328 110 VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQC 185 (391)
Q Consensus 110 ~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~ 185 (391)
...-.+++.. +..+|+.++.+ ..+.+||+.+.+....-.... ....++.. ++.||+.++.
T Consensus 115 -~~~~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~----~~~~~~~~~dg~~l~~~~~~----- 178 (391)
T 1l0q_A 115 -GKSPLGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVGR----SPKGIAVTPDGTKVYVANFD----- 178 (391)
T ss_dssp -SSSEEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECCS----SEEEEEECTTSSEEEEEETT-----
T ss_pred -CCCcceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecCC----CcceEEECCCCCEEEEEeCC-----
Confidence 1112233332 34677776543 358999998876654322222 12333333 4477777653
Q ss_pred CCCcceeEEEeCCCCceE
Q 016328 186 RGPTAHTFVLDTETKKWQ 203 (391)
Q Consensus 186 ~~~~~~~~~yd~~~~~W~ 203 (391)
...+..||+.+.+-.
T Consensus 179 ---~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 179 ---SMSISVIDTVTNSVI 193 (391)
T ss_dssp ---TTEEEEEETTTTEEE
T ss_pred ---CCEEEEEECCCCeEE
Confidence 256889999887543
No 46
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.17 E-value=0.74 Score=43.30 Aligned_cols=132 Identities=10% Similarity=0.071 Sum_probs=64.2
Q ss_pred ECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 120 ~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
.++..++.|+.+ ..+.+||..+.+-... +... ...-.+++. .++..++.|+.+ ..+..||..
T Consensus 278 ~~~~~l~~~~~d------~~i~vwd~~~~~~~~~--~~~~-~~~v~~~~~~~~~~~l~sg~~d--------g~i~vwd~~ 340 (464)
T 3v7d_B 278 GHGNIVVSGSYD------NTLIVWDVAQMKCLYI--LSGH-TDRIYSTIYDHERKRCISASMD--------TTIRIWDLE 340 (464)
T ss_dssp EETTEEEEEETT------SCEEEEETTTTEEEEE--ECCC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEETT
T ss_pred CCCCEEEEEeCC------CeEEEEECCCCcEEEE--ecCC-CCCEEEEEEcCCCCEEEEEeCC--------CcEEEEECC
Confidence 345566666654 2488899876653322 1111 111223333 355566677653 347789987
Q ss_pred CCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCcceeEEEECCEE
Q 016328 199 TKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRL 278 (391)
Q Consensus 199 ~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i 278 (391)
+.+- +..+......-.+...++..++.|+.++ .+..|++ .+..-..... ........+...++++
T Consensus 341 ~~~~--~~~~~~h~~~v~~~~~~~~~l~s~s~dg-----~v~vwd~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 341 NGEL--MYTLQGHTALVGLLRLSDKFLVSAAADG-----SIRGWDA-------NDYSRKFSYH-HTNLSAITTFYVSDNI 405 (464)
T ss_dssp TTEE--EEEECCCSSCEEEEEECSSEEEEEETTS-----EEEEEET-------TTCCEEEEEE-CTTCCCEEEEEECSSE
T ss_pred CCcE--EEEEeCCCCcEEEEEEcCCEEEEEeCCC-----cEEEEEC-------CCCceeeeec-CCCCccEEEEEeCCCE
Confidence 7542 2222222222334445677777777543 3556653 2221111111 1111222445567777
Q ss_pred EEEeC
Q 016328 279 LVIGG 283 (391)
Q Consensus 279 ~v~GG 283 (391)
++.|+
T Consensus 406 l~~~~ 410 (464)
T 3v7d_B 406 LVSGS 410 (464)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 77776
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.088 Score=47.88 Aligned_cols=96 Identities=10% Similarity=0.121 Sum_probs=53.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-C--CEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
++..++.|+.+ ..+.+||...++++.+..+... ...-.+++.. + +.+++.|+.+ ..+..||.
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~l~s~~~d--------g~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVLIWKE 86 (379)
T ss_dssp SSSEEEEEETT------SCEEEEEEETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------SCEEEEEE
T ss_pred CCCEEEEEECC------CcEEEEecCCCcceeeeEecCC-CCcEEEEEeCCCCCCCEEEEeccC--------CEEEEEEc
Confidence 45566677654 2478888877777665444331 1122334432 2 5677777654 34678898
Q ss_pred CCCceEECCCCCCCCCCceEEEE--C--CEEEEEccCC
Q 016328 198 ETKKWQDLPPLPVPRYAPATQLW--R--GRLHVMGGSG 231 (391)
Q Consensus 198 ~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~ 231 (391)
.+.+|..+..+........++.+ + +.+++.|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 124 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 124 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC
Confidence 88888776544422222222222 2 5677777654
No 48
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.14 E-value=0.18 Score=46.50 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=33.1
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
.+..+++|+.+ ..+.+||..+.+-...-.... ..-.+++. .++.+++.|+.+ ..+..||..+
T Consensus 216 ~~~~~~~~~~~------g~i~~~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~ 278 (425)
T 1r5m_A 216 DDDKFVIPGPK------GAIFVYQITEKTPTGKLIGHH---GPISVLEFNDTNKLLLSASDD--------GTLRIWHGGN 278 (425)
T ss_dssp ETTEEEEECGG------GCEEEEETTCSSCSEEECCCS---SCEEEEEEETTTTEEEEEETT--------SCEEEECSSS
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCceeeeeccCC---CceEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 34446666653 358899988764322111111 11223333 355566666643 3467788776
Q ss_pred Cc
Q 016328 200 KK 201 (391)
Q Consensus 200 ~~ 201 (391)
.+
T Consensus 279 ~~ 280 (425)
T 1r5m_A 279 GN 280 (425)
T ss_dssp BS
T ss_pred Cc
Confidence 43
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.12 E-value=0.081 Score=48.11 Aligned_cols=104 Identities=13% Similarity=0.191 Sum_probs=57.2
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
+++++++|+.+ ..+.+||..+.+|+.+..+... ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d--------g~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTD--------RNAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCC--------CeEEEEECCC
Confidence 45667777653 3588999998877665544331 1122233333 56667777643 3467888888
Q ss_pred CceEECCCCC-CCCCCceEEE-ECCEEEEEccCCCCccCCCccceEe
Q 016328 200 KKWQDLPPLP-VPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 200 ~~W~~~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
.++.....+. ....-.++.. -++++++.|+.++ .+..|++
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~ 125 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR-----VISICYF 125 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEE
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEe
Confidence 8766543222 2222222222 2566777776542 3556664
No 50
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.07 E-value=0.4 Score=43.37 Aligned_cols=101 Identities=15% Similarity=0.123 Sum_probs=47.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
++..++.||.+ ..+.+||+.+.. ......+..............+++ ++.|+.+ ..+..||+.
T Consensus 108 ~~~~l~s~~~d------~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d--------~~i~~wd~~ 172 (340)
T 1got_B 108 SGNYVACGGLD------NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD--------TTCALWDIE 172 (340)
T ss_dssp TSSEEEEEETT------CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC--------CcEEEEECC
Confidence 45667777764 347788887643 111111111001111122234555 4555543 456788988
Q ss_pred CCceEECCCCCC-CCCCceEEE-ECCEEEEEccCCCCccCCCccceE
Q 016328 199 TKKWQDLPPLPV-PRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 199 ~~~W~~~~~~~~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
+.+-.. .+.. ...-.+++. -++++++.|+.++ .+..|+
T Consensus 173 ~~~~~~--~~~~h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd 212 (340)
T 1got_B 173 TGQQTT--TFTGHTGDVMSLSLAPDTRLFVSGACDA-----SAKLWD 212 (340)
T ss_dssp TTEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CCcEEE--EEcCCCCceEEEEECCCCCEEEEEeCCC-----cEEEEE
Confidence 765332 1111 111112222 2566778877643 356666
No 51
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.99 E-value=0.71 Score=40.21 Aligned_cols=170 Identities=11% Similarity=0.007 Sum_probs=81.4
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCCCC-CCCCceeeEeecCcccccccccccccccccccCceEEccCCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNG-PQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~-~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
++.+|+..... +.+..||+. .+ ..++.+. .....++.....+...........+..||+. .++........
T Consensus 30 ~g~l~v~~~~~-----~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~ 102 (300)
T 2qc5_A 30 DGKVWFTQHKA-----NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQP 102 (300)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred CCCEEEEcCCC-----CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCC
Confidence 57788875422 367788888 55 3222111 1112233322222111111122357788877 66654321111
Q ss_pred CccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCC
Q 016328 111 PRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGP 188 (391)
Q Consensus 111 ~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 188 (391)
...-++++.. ++.+|+.... ...+.+||+. .+..... ++.. ......++. -+++||+....
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~-~~~~-~~~~~~i~~d~~g~l~v~~~~-------- 165 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYD-LPNK-GSYPAFITLGSDNALWFTENQ-------- 165 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETT------TTEEEEECTT-SCEEEEE-CSST-TCCEEEEEECTTSSEEEEETT--------
T ss_pred CCCCccceECCCCCEEEEccC------CCeEEEECCC-CCEEEcc-CCCC-CCCceeEEECCCCCEEEEecC--------
Confidence 1122233332 5688887532 2358889987 6555432 2211 122234444 35678886421
Q ss_pred cceeEEEeCCCCceEECCCCCCCCCC-ceEEEE-CCEEEEEc
Q 016328 189 TAHTFVLDTETKKWQDLPPLPVPRYA-PATQLW-RGRLHVMG 228 (391)
Q Consensus 189 ~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~G 228 (391)
...+++||+ +.+...+. ++..... ..++.. ++.||+..
T Consensus 166 ~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 166 NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEc
Confidence 356889998 66665542 2211112 223332 56788764
No 52
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.85 E-value=0.81 Score=39.80 Aligned_cols=169 Identities=9% Similarity=0.032 Sum_probs=80.2
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCCC-CCCCCceeeEeecCcccccccccccccccccccCceEEccCCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNN-GPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~-~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
++.+|+..... +.+..||+. +. ...+.. ......+++....+..-........+..+|+. .+.+... +|.
T Consensus 25 ~g~l~v~~~~~-----~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~ 96 (299)
T 2z2n_A 25 KGKVWITQHKA-----NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYT-LPN 96 (299)
T ss_dssp TSCEEEEETTT-----TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE-CSS
T ss_pred CCCEEEEecCC-----CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEe-CCC
Confidence 56788764322 357888888 55 332211 11112233222222111111112356777775 4444433 221
Q ss_pred CccC-ceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCC
Q 016328 111 PRLD-GAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRG 187 (391)
Q Consensus 111 ~r~~-~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~ 187 (391)
.-.. ++++.. ++++|+.... ...+.+||+ +.+..... ++.. ......++.. ++++|+..-.
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~-~~~~-~~~~~~i~~~~~g~l~v~~~~------- 160 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYE-LPNK-GSYPSFITLGSDNALWFTENQ------- 160 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEE-CSST-TCCEEEEEECTTSCEEEEETT-------
T ss_pred cCCCceeeEECCCCCEEEEecC------CceEEEECC-CCCEEEec-CCCC-CCCCceEEEcCCCCEEEEeCC-------
Confidence 1112 233333 4688887532 235888998 55555432 1211 1222344443 6789886421
Q ss_pred CcceeEEEeCCCCceEECCCCCCCCC-CceEEEE-CCEEEEEc
Q 016328 188 PTAHTFVLDTETKKWQDLPPLPVPRY-APATQLW-RGRLHVMG 228 (391)
Q Consensus 188 ~~~~~~~yd~~~~~W~~~~~~~~~r~-~~~~~~~-~~~iyv~G 228 (391)
...+++||+ +.+..... .+.... -..++.. +++||+..
T Consensus 161 -~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 161 -NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp -TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred -CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEc
Confidence 357899999 77766542 111111 1233332 46788775
No 53
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.6 Score=40.87 Aligned_cols=24 Identities=29% Similarity=0.128 Sum_probs=16.7
Q ss_pred ecCEEEEecCCCCcccceeEeeecCCCCe
Q 016328 32 VADFFWASSSKFTSSYLNIASNWSPYHNS 60 (391)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (391)
-++..++.|+.++ .+..||..+..
T Consensus 27 ~~~~~l~s~~~dg-----~v~vw~~~~~~ 50 (313)
T 3odt_A 27 VDDSKVASVSRDG-----TVRLWSKDDQW 50 (313)
T ss_dssp EETTEEEEEETTS-----EEEEEEESSSE
T ss_pred cCCCEEEEEEcCC-----cEEEEECCCCE
Confidence 4566677777665 67788887765
No 54
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.72 E-value=0.23 Score=44.87 Aligned_cols=102 Identities=7% Similarity=0.012 Sum_probs=49.3
Q ss_pred ccccccccccCceEEccCCCCCccC-ceEEEE-CC-EEEEEeccCCCCCCcceeEEEECC-CCCeeeCCCCCC----CC-
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLD-GAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFT-DNTWGGRFDMPR----EM- 160 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~-~vyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~----~~- 160 (391)
..+..|+..+.+++.+..+...... ..++.- ++ .||+.+.. ...+.+||+. +.+.+.+..++. |.
T Consensus 63 ~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~ 136 (347)
T 3hfq_A 63 GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRP 136 (347)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSST
T ss_pred ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCc
Confidence 3677788776666665543211111 223322 33 57776532 1347777774 233333221110 10
Q ss_pred ---CcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCC-CCceEEC
Q 016328 161 ---AHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTE-TKKWQDL 205 (391)
Q Consensus 161 ---~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~-~~~W~~~ 205 (391)
....+.++. -++++|+.+.. ...+..||+. +.+...+
T Consensus 137 ~~~~~~~~~~~~spdg~l~v~~~~--------~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 137 EQDGSHIHYTDLTPDNRLAVIDLG--------SDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp TCSSCCEEEEEECTTSCEEEEETT--------TTEEEEEEECTTSCEEEE
T ss_pred cccCCCceEEEECCCCcEEEEeCC--------CCEEEEEEECCCCcEEEe
Confidence 111233343 35667776532 3567888887 5555543
No 55
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.63 E-value=1.2 Score=39.99 Aligned_cols=188 Identities=12% Similarity=0.134 Sum_probs=86.3
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCC--CCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTD--NTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
+++.++.|+.+ ..+.+||... ..++.+..+... ...-.+++. -++.+++.|+.++ .+..||.
T Consensus 118 ~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~s~s~D~--------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRD------KSVWIWETDESGEEYECISVLQEH-SQDVKHVIWHPSEALLASSSYDD--------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETT------SCEEEEECCTTCCCCEEEEEECCC-SSCEEEEEECSSSSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEeccC-CCceEEEEECCCCCEEEEEcCCC--------eEEEEEC
Confidence 45667777754 2477888743 345443333221 111122332 2566777777643 3556777
Q ss_pred CCCceEECCCCCCCCCC-ceEEEE-C--CEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCC--CCcceeE
Q 016328 198 ETKKWQDLPPLPVPRYA-PATQLW-R--GRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPR--GGPHRAC 271 (391)
Q Consensus 198 ~~~~W~~~~~~~~~r~~-~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~~~~~~~ 271 (391)
.+..|+.+..+...... .++... + +..++.|+.+ ..+..|++.... ......|.....++. ...-.++
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~-~~~~~~~~~~~~~~~~h~~~v~~v 256 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD-----STVRVWKYMGDD-EDDQQEWVCEAILPDVHKRQVYNV 256 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT-----SCEEEEEEEEEC-TTSCEEEEEEEECCSCCSSCEEEE
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC-----CeEEEEEecCCC-ccccceeEEeeecccccccceEEE
Confidence 77767665433321111 122222 2 3455666643 246677753211 112334554433332 1111122
Q ss_pred EEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCceeeEEE--E--CCEEEEE
Q 016328 272 VVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVL--V--NNSIVIV 346 (391)
Q Consensus 272 ~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~~~--~--~~~l~i~ 346 (391)
+...+.+++.||.++. |..+| .+..|..+..............+. . ++++++.
T Consensus 257 ~~s~~~~l~s~~~dg~----------------------v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las 314 (330)
T 2hes_X 257 AWGFNGLIASVGADGV----------------------LAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILAT 314 (330)
T ss_dssp EECTTSCEEEEETTSC----------------------EEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEE
T ss_pred EEcCCCEEEEEeCCCE----------------------EEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEE
Confidence 2224456667776432 56666 666776553322111110111122 2 4677888
Q ss_pred ccccC
Q 016328 347 GGTTE 351 (391)
Q Consensus 347 GG~~~ 351 (391)
||.++
T Consensus 315 ~s~Dg 319 (330)
T 2hes_X 315 GGDDG 319 (330)
T ss_dssp EETTS
T ss_pred ecCCC
Confidence 88764
No 56
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.51 E-value=0.29 Score=42.90 Aligned_cols=153 Identities=14% Similarity=0.072 Sum_probs=87.3
Q ss_pred ceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccce
Q 016328 163 SHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHW 242 (391)
Q Consensus 163 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 242 (391)
+..++...++.||+..|..+ .+.++|+++.+=..-- ++..-.+.+++..+++||+....++ ...+|
T Consensus 56 ftqGL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~-----~v~V~ 121 (268)
T 3nok_A 56 FTQGLVFHQGHFFESTGHQG--------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEG-----LLFTW 121 (268)
T ss_dssp CEEEEEEETTEEEEEETTTT--------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSC-----EEEEE
T ss_pred ccceEEEECCEEEEEcCCCC--------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCC-----EEEEE
Confidence 34567778999999988643 3788999987633222 4443344567788999999965432 23333
Q ss_pred EeeeecCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcE-E
Q 016328 243 SLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKW-K 320 (391)
Q Consensus 243 ~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W-~ 320 (391)
+ +++.+- +...+....+.+.+.-+++||+.-|. +.++.+| .+.+- .
T Consensus 122 D-------~~Tl~~--~~ti~~~~eGwGLt~Dg~~L~vSdGs-----------------------~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 122 S-------GMPPQR--ERTTRYSGEGWGLCYWNGKLVRSDGG-----------------------TMLTFHEPDGFALVG 169 (268)
T ss_dssp E-------TTTTEE--EEEEECSSCCCCEEEETTEEEEECSS-----------------------SEEEEECTTTCCEEE
T ss_pred E-------CCcCcE--EEEEeCCCceeEEecCCCEEEEECCC-----------------------CEEEEEcCCCCeEEE
Confidence 2 333332 22222222334666778889998762 2488888 55432 2
Q ss_pred EcCC--CCCCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCccc
Q 016328 321 VLPS--MPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 321 ~v~~--~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~ 374 (391)
.+.- -+.+..... -+...+++||+- -+. . ++|.+.|+++.+
T Consensus 170 ~I~V~~~g~~v~~lN-eLe~~dG~lyan-vw~-s----------~~I~vIDp~TG~ 212 (268)
T 3nok_A 170 AVQVKLRGQPVELIN-ELECANGVIYAN-IWH-S----------SDVLEIDPATGT 212 (268)
T ss_dssp EEECEETTEECCCEE-EEEEETTEEEEE-ETT-C----------SEEEEECTTTCB
T ss_pred EEEeCCCCccccccc-ccEEeCCEEEEE-ECC-C----------CeEEEEeCCCCc
Confidence 2211 121211111 133458888852 221 1 379999998877
No 57
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.50 E-value=0.14 Score=46.59 Aligned_cols=105 Identities=10% Similarity=0.099 Sum_probs=55.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++++++.||.+ ..+.+||..+++|.....+.......-.+++. -++++++.|+.++ .+..||..+
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------TTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEECC
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--------cEEEEEccC
Confidence 56777777765 24778888888776432221111122223333 3567777777643 355677777
Q ss_pred CceEECCCCCCCCCC-ceEEE-ECCEEEEEccCCCCccCCCccceEe
Q 016328 200 KKWQDLPPLPVPRYA-PATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 200 ~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
..++.+..+...... .+++. -++++++.|+.+. .+..|++
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~ 134 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEV 134 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEE
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEEC
Confidence 666554433221111 12222 2567777777643 4666764
No 58
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.41 E-value=0.48 Score=44.36 Aligned_cols=200 Identities=11% Similarity=0.061 Sum_probs=98.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CC-EEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
+++.+++++.+.. ...++++|+.+.+...+...+. ...+.+.. ++ +|++.+..++ ...++.+|+.
T Consensus 189 dg~~la~~s~~~~---~~~i~~~d~~tg~~~~l~~~~~----~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~ 255 (415)
T 2hqs_A 189 DGSKLAYVTFESG---RSALVIQTLANGAVRQVASFPR----HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLA 255 (415)
T ss_dssp TSSEEEEEECTTS---SCEEEEEETTTCCEEEEECCSS----CEEEEEECTTSSEEEEEECTTS------SCEEEEEETT
T ss_pred CCCEEEEEEecCC---CcEEEEEECCCCcEEEeecCCC----cccCEEEcCCCCEEEEEEecCC------CceEEEEECC
Confidence 4555555554432 2469999999988776544332 12233332 44 4555554332 4679999999
Q ss_pred CCceEECCCCCCCCCCceEE-EECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCcceeEEE--EC
Q 016328 199 TKKWQDLPPLPVPRYAPATQ-LWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVV--VD 275 (391)
Q Consensus 199 ~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~--~~ 275 (391)
+.+...+..-... ....+ .-+++.+++++.... ....|.. |..+.+-+.+... .. ....+. -+
T Consensus 256 ~~~~~~l~~~~~~--~~~~~~spdg~~l~~~s~~~g----~~~i~~~-----d~~~~~~~~l~~~--~~-~~~~~~~spd 321 (415)
T 2hqs_A 256 SGQIRQVTDGRSN--NTEPTWFPDSQNLAFTSDQAG----RPQVYKV-----NINGGAPQRITWE--GS-QNQDADVSSD 321 (415)
T ss_dssp TCCEEECCCCSSC--EEEEEECTTSSEEEEEECTTS----SCEEEEE-----ETTSSCCEECCCS--SS-EEEEEEECTT
T ss_pred CCCEEeCcCCCCc--ccceEECCCCCEEEEEECCCC----CcEEEEE-----ECCCCCEEEEecC--CC-cccCeEECCC
Confidence 8887766532211 11112 225554444442211 1222322 2444433322211 11 112222 25
Q ss_pred CEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCceeeEEEECCEEEEEccccCCCC
Q 016328 276 DRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHP 354 (391)
Q Consensus 276 ~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~ 354 (391)
++.+++++.... ...++.+| .+.+...+.... .........+++.+++++.+...
T Consensus 322 G~~l~~~~~~~g-------------------~~~i~~~d~~~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~~~- 377 (415)
T 2hqs_A 322 GKFMVMVSSNGG-------------------QQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQGMG- 377 (415)
T ss_dssp SSEEEEEEECSS-------------------CEEEEEEETTTCCEEECCCSS----SCEEEEECTTSSEEEEEEEETTE-
T ss_pred CCEEEEEECcCC-------------------ceEEEEEECCCCCEEEecCCC----CcCCeEEcCCCCEEEEEEcCCCc-
Confidence 555555543211 12478888 777776654321 12222234567777777654321
Q ss_pred cccceeEecceEEEecCccccccCC
Q 016328 355 TTKKMVLVGEIFQFNLNTLVSAFYP 379 (391)
Q Consensus 355 ~~~~~~~~~~v~~~d~~~~~~~~lp 379 (391)
..+|.+|++......++
T Consensus 378 --------~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 378 --------SVLNLVSTDGRFKARLP 394 (415)
T ss_dssp --------EEEEEEETTSCCEEECC
T ss_pred --------cEEEEEECCCCcEEEee
Confidence 26888888655444443
No 59
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.32 E-value=1.5 Score=39.18 Aligned_cols=98 Identities=13% Similarity=0.044 Sum_probs=51.3
Q ss_pred ccccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCC------C
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM------A 161 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~------~ 161 (391)
..+..+|+.+.+-...-+. ...-+.++.. ++.+|+.+..+ ..+.+||+.+.+-...-+++... +
T Consensus 69 ~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 140 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVN------SAVTAIDAKTGEVKGRLVLDDRKRTEEVRP 140 (353)
T ss_dssp EEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEEESCCCCCCSSCCC
T ss_pred ccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCC------CEEEEEeCCCCeeEEEEecCCCccccccCC
Confidence 3677788776653322111 1122333333 34688876542 36899999887643321221100 0
Q ss_pred cceEEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCCCCce
Q 016328 162 HSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (391)
Q Consensus 162 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (391)
.....++. .++.+|+.+... ...++.||+.+.+-
T Consensus 141 ~~~~~~~~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~~ 176 (353)
T 3vgz_A 141 LQPRELVADDATNTVYISGIGK-------ESVIWVVDGGNIKL 176 (353)
T ss_dssp CEEEEEEEETTTTEEEEEEESS-------SCEEEEEETTTTEE
T ss_pred CCCceEEECCCCCEEEEEecCC-------CceEEEEcCCCCce
Confidence 11233444 346788876211 35688999987653
No 60
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.29 E-value=0.27 Score=42.53 Aligned_cols=107 Identities=6% Similarity=-0.046 Sum_probs=57.1
Q ss_pred cccccccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCC-CCeeeCCCCCCCCCcce
Q 016328 87 ILPATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTD-NTWGGRFDMPREMAHSH 164 (391)
Q Consensus 87 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~~~r~~ 164 (391)
.....+..+|..+.+...+...+ ..-.++... +++.+++++. ..++++|+.+ .+...+...+.. ....
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~--~~v~~~~~spdg~~l~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~-~~~~ 88 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTP--ELFEAPNWSPDGKYLLLNSE-------GLLYRLSLAGDPSPEKVDTGFAT-ICNN 88 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEES--SCCEEEEECTTSSEEEEEET-------TEEEEEESSSCCSCEECCCTTCC-CBCS
T ss_pred CcceeEEEEeCCCCceeeeccCC--cceEeeEECCCCCEEEEEcC-------CeEEEEeCCCCCCceEecccccc-cccc
Confidence 34446778888777655443321 111222222 4555555541 3599999998 777665433321 1111
Q ss_pred EEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC
Q 016328 165 LGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (391)
Q Consensus 165 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (391)
.....-+++.+++++..... ...++.+|..+..-+.+..
T Consensus 89 ~~~~spdg~~l~~~~~~~~~----~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFG----KSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp CCEECTTSSEEEEEECTTTS----SCEEEEEETTCCCCEECCS
T ss_pred ceEECCCCCEEEEEEeCCCC----cceEEEEECCCCceEEeec
Confidence 11222355555555533222 5788999988877665543
No 61
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.27 E-value=1.3 Score=40.24 Aligned_cols=101 Identities=13% Similarity=0.172 Sum_probs=50.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
+++.++.|+.+. .+.+||..+.+-...-.... ..-.+++.. ++.+++.++.++ .+..||..
T Consensus 150 dg~~l~sgs~dg------~v~iwd~~~~~~~~~~~~h~---~~v~~v~~s~~~~~~~~s~~~dg--------~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGKDF------SVKVWDLSQKAVLKSYNAHS---SEVNCVAACPGKDTIFLSCGEDG--------RILLWDTR 212 (357)
T ss_dssp SSSEEEEEETTS------CEEEEETTTTEEEEEECCCS---SCEEEEEECTTCSSCEEEEETTS--------CEEECCTT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCC---CCEEEEEEccCCCceeeeeccCC--------ceEEEECC
Confidence 566777777642 47889988775433211111 112233332 335777777543 46678887
Q ss_pred CCceEECCCCCCCCCCceEEEE---CCEEEEEccCCCCccCCCccceE
Q 016328 199 TKKWQDLPPLPVPRYAPATQLW---RGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 199 ~~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
+.+-...-..........++.+ ++.+++.|+.+. .+..|+
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~-----~i~~wd 255 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG-----NVSLVN 255 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS-----CEEEEE
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeeccc-----ceeEEE
Confidence 6543222222212222222232 456777776543 355565
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.25 E-value=0.69 Score=40.91 Aligned_cols=123 Identities=7% Similarity=-0.030 Sum_probs=59.0
Q ss_pred ccccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEE
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~ 167 (391)
..+..+|..+.+......+...........+ +++.++.|+.+ ..+.+||..+.+....-..+. ..-.++
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~~---~~i~~~ 189 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHT---DGASCI 189 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCS---SCEEEE
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC------CcEEEEeCCCCceeeeeeccc---CceEEE
Confidence 3566777776654333322222222222222 45666666654 348899998775443211111 112233
Q ss_pred EEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEE-ECCEEEEEccCC
Q 016328 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSG 231 (391)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~ 231 (391)
+.. ++..++.|+. ...+..||+.+.+-...-.. .....+++. -+++++++|+.+
T Consensus 190 ~~~~~~~~l~~~~~--------dg~i~~~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 190 DISNDGTKLWTGGL--------DNTVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp EECTTSSEEEEEET--------TSEEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCCEEEEEec--------CCcEEEEECCCCceEeeecC--CCceEEEEECCCCCEEEEEcCC
Confidence 332 5556666664 34678899887653222111 111222222 356667777643
No 63
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.18 E-value=1.1 Score=40.18 Aligned_cols=100 Identities=6% Similarity=0.015 Sum_probs=47.8
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeee-CCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++.+++.|+.+ ..+.++|..+.+-.. +..-+. ........-+++.++.|+.+ ..+..||..+
T Consensus 91 ~~~~l~s~s~D------~~i~lWd~~~~~~~~~~~~~~~---~~~~~~~spdg~~l~~g~~d--------g~v~i~~~~~ 153 (321)
T 3ow8_A 91 TLPIAASSSLD------AHIRLWDLENGKQIKSIDAGPV---DAWTLAFSPDSQYLATGTHV--------GKVNIFGVES 153 (321)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCTT---CCCCEEECTTSSEEEEECTT--------SEEEEEETTT
T ss_pred CCCEEEEEeCC------CcEEEEECCCCCEEEEEeCCCc---cEEEEEECCCCCEEEEEcCC--------CcEEEEEcCC
Confidence 34566666654 358888987765332 111111 11111222356667777643 4567788776
Q ss_pred CceEECCCCCCCCCCceEE-EECCEEEEEccCCCCccCCCccceE
Q 016328 200 KKWQDLPPLPVPRYAPATQ-LWRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 200 ~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
.+-...-.. ......+++ .-++++++.|+.++ .+..|+
T Consensus 154 ~~~~~~~~~-~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd 192 (321)
T 3ow8_A 154 GKKEYSLDT-RGKFILSIAYSPDGKYLASGAIDG-----IINIFD 192 (321)
T ss_dssp CSEEEEEEC-SSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CceeEEecC-CCceEEEEEECCCCCEEEEEcCCC-----eEEEEE
Confidence 543211111 111111222 23567777776543 355565
No 64
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.15 E-value=0.21 Score=50.91 Aligned_cols=104 Identities=12% Similarity=0.140 Sum_probs=58.8
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eC--CEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DG--RYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~--~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
++..++.|+.+ ..+.+||...+++..+..+... ...-.+++. .+ +.+++.|+.++ .+..||.
T Consensus 20 dg~~latg~~d------g~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s~Dg--------~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKE 84 (753)
T ss_dssp SSCCEEEEETT------TEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEETTS--------CEEEEEE
T ss_pred CCCeEEEEECC------CcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEeCCC--------eEEEEEC
Confidence 34566677654 3488888887777766544431 112223443 23 66777777643 4678888
Q ss_pred CCCceEECCCCCCCCCCceEEEE--C--CEEEEEccCCCCccCCCccceEe
Q 016328 198 ETKKWQDLPPLPVPRYAPATQLW--R--GRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 198 ~~~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
.+.+|..+..+......-.++.+ + +.+++.|+.++ .+..|++
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl 130 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEF 130 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEC
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEe
Confidence 88887766544322222222222 2 56777777543 3455553
No 65
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.13 E-value=0.92 Score=42.44 Aligned_cols=103 Identities=10% Similarity=0.068 Sum_probs=56.4
Q ss_pred EEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEe
Q 016328 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLD 196 (391)
Q Consensus 117 ~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd 196 (391)
+...++..++.|+.+ ..+.+||..+.+-... +.. ..........++.+++.|+.++ .+..||
T Consensus 138 ~~~~d~~~l~~g~~d------g~i~iwd~~~~~~~~~--~~~--h~~~v~~l~~~~~~l~sg~~dg--------~i~vwd 199 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD------NTIKIWDKNTLECKRI--LTG--HTGSVLCLQYDERVIITGSSDS--------TVRVWD 199 (435)
T ss_dssp EEECCSSEEEEEESS------SCEEEEESSSCCEEEE--ECC--CSSCEEEEECCSSEEEEEETTS--------CEEEEE
T ss_pred EEEECCCEEEEEeCC------CeEEEEeCCCCeEEEE--EcC--CCCcEEEEEECCCEEEEEcCCC--------eEEEEE
Confidence 344577778888764 3488899877654332 221 1112233334777888887643 467888
Q ss_pred CCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEe
Q 016328 197 TETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 197 ~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
..+.+-.. .+......-.+...++.+++.|+.++ .+..|++
T Consensus 200 ~~~~~~~~--~~~~h~~~v~~l~~~~~~l~s~s~dg-----~i~vwd~ 240 (435)
T 1p22_A 200 VNTGEMLN--TLIHHCEAVLHLRFNNGMMVTCSKDR-----SIAVWDM 240 (435)
T ss_dssp SSSCCEEE--EECCCCSCEEEEECCTTEEEEEETTS-----CEEEEEC
T ss_pred CCCCcEEE--EEcCCCCcEEEEEEcCCEEEEeeCCC-----cEEEEeC
Confidence 87765322 12211222233344566777776543 3556653
No 66
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=95.11 E-value=0.3 Score=43.55 Aligned_cols=131 Identities=8% Similarity=0.033 Sum_probs=62.4
Q ss_pred ecCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC-cccccccccccccccccccCce-E-Ecc
Q 016328 32 VADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKW-E-KMK 106 (391)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W-~-~~~ 106 (391)
-.+.+|+..+.++ .+..||+.+++ ..++.. ... .+++....+ .......-...+..+|..+.+- . .+.
T Consensus 8 ~~~~~~v~~~~~~-----~v~~~d~~~~~~~~~~~~~-~~~-~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 8 TSNFGIVVEQHLR-----RISFFSTDTLEILNQITLG-YDF-VDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp CCCEEEEEEGGGT-----EEEEEETTTCCEEEEEECC-CCE-EEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE
T ss_pred CCCEEEEEecCCC-----eEEEEeCcccceeeeEEcc-CCc-ceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc
Confidence 3577888876443 78899999887 222221 111 122222111 1111112233677888877653 2 222
Q ss_pred CCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CC-EEEEEeC
Q 016328 107 AAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTG 179 (391)
Q Consensus 107 ~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~-~iyv~GG 179 (391)
....++ ++++.. +..+| ++...+ . ...+.+||+.+.+-...-+... ..+.++.. ++ .||+.+.
T Consensus 81 ~~~~~~--~~~~~s~dg~~l~-~~~~~~-~--~~~i~v~d~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 81 EGQSSM--ADVDITPDDQFAV-TVTGLN-H--PFNMQSYSFLKNKFISTIPIPY----DAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp ECSSCC--CCEEECTTSSEEE-ECCCSS-S--SCEEEEEETTTTEEEEEEECCT----TEEEEEECTTSSCEEEEEE
T ss_pred cCCCCc--cceEECCCCCEEE-EecCCC-C--cccEEEEECCCCCeEEEEECCC----CccceEECCCCCEEEEEec
Confidence 222222 213322 34666 332211 1 1269999998876654322221 22344443 33 5887754
No 67
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.06 E-value=0.063 Score=49.20 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=48.0
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++++++.|+.+ ..+.+||..++.|+.+..+.... ..-.+++.. ++++++.|+.+ ..+..||..+
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~d--------~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGNGWKHARTFSDHD-KIVTCVDWAPKSNRIVTCSQD--------RNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETTEEEECCCBCCCS-SCEEEEEECTTTCCEEEEETT--------SSEEEC----
T ss_pred CCCEEEEecCC------CEEEEEEccCCceEEEEEEecCC-ceEEEEEEeCCCCEEEEEeCC--------CeEEEEEcCC
Confidence 45666666654 34778888888888876665421 122233333 56677777754 3467788877
Q ss_pred Cc-eEECCCCCC-CCCCceEEE-ECCEEEEEccCC
Q 016328 200 KK-WQDLPPLPV-PRYAPATQL-WRGRLHVMGGSG 231 (391)
Q Consensus 200 ~~-W~~~~~~~~-~r~~~~~~~-~~~~iyv~GG~~ 231 (391)
.. |.....+.. ...-.+++. -++++++.|+.+
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 121 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA 121 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecC
Confidence 66 443322221 111112222 256667777654
No 68
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.99 E-value=2.1 Score=40.65 Aligned_cols=59 Identities=14% Similarity=0.190 Sum_probs=37.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
++++|+|-| +..|.||..+++.... ..|. .+. --++....+++|+|-| +..++||+.+.
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~-~w~g-i~~-iDAA~~~~g~~YfFkG----------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKER-SWPA-VGN-CTSALRWLGRYYCFQG----------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEE-CCTT-SCC-CSEEEEETTEEEEEET----------TEEEEECTTTC
T ss_pred CCeEEEEec--------ccEEEEecccceeecc-cCCC-CCc-cchheeeCCceEEEEC----------CEEEEEcCccC
Confidence 678899887 3489999887754431 1111 122 1244445789999966 56778887654
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.96 E-value=0.38 Score=42.90 Aligned_cols=52 Identities=19% Similarity=0.088 Sum_probs=25.2
Q ss_pred CEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEE-ECCEEEEEccCCC
Q 016328 172 RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGE 232 (391)
Q Consensus 172 ~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~ 232 (391)
+.+++.|+.+ ..+..||..+.+-...-... ...-.+++. -++++++.|+.++
T Consensus 185 ~~~~~s~~~d--------~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 185 NPIIVSCGWD--------KLVKVWNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp SCEEEEEETT--------SCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTC
T ss_pred CcEEEEEcCC--------CEEEEEECCCCceeeEecCC-CCcEEEEEECCCCCEEEEEeCCC
Confidence 3456666543 34667888776533221111 111112222 2567777777643
No 70
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.80 E-value=0.28 Score=44.72 Aligned_cols=134 Identities=10% Similarity=0.011 Sum_probs=62.6
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCC-eeeCCCCCCCCCcceEEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGRFDMPREMAHSHLGM 167 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~~~r~~~~~ 167 (391)
.+..||..+..|+.+..+......-..+.+ ++..++.|+.+ ..+.+||..+.+ |.....+... ...-.++
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~~~~~-~~~v~~~ 106 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKRPDGTWKQTLVLLRL-NRAATFV 106 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC------CCCCEEECCCC-SSCEEEE
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcCCCCceeeeeEeccc-CCceEEE
Confidence 566777777777666655533333223333 45667777654 248889988877 6554333221 1122233
Q ss_pred EEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCCc-eEECCCCCC--CCCCceEEE-ECCEEEEEccCCCCccCCCccce
Q 016328 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK-WQDLPPLPV--PRYAPATQL-WRGRLHVMGGSGENRYTPEVDHW 242 (391)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~--~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 242 (391)
+.. ++++++.|+.+ ..+..||..+.+ |..+..+.. ...-.+++. -++++++.|+.++ .+..|
T Consensus 107 ~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-----~i~iw 173 (377)
T 3dwl_C 107 RWSPNEDKFAVGSGA--------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR-----KAYVL 173 (377)
T ss_dssp ECCTTSSCCEEEESS--------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS-----CEEEE
T ss_pred EECCCCCEEEEEecC--------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC-----EEEEE
Confidence 332 56667777653 346677777654 433332222 111122222 2566777777543 35566
Q ss_pred Ee
Q 016328 243 SL 244 (391)
Q Consensus 243 ~~ 244 (391)
++
T Consensus 174 d~ 175 (377)
T 3dwl_C 174 SA 175 (377)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 71
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.71 E-value=0.48 Score=40.89 Aligned_cols=144 Identities=8% Similarity=-0.073 Sum_probs=70.7
Q ss_pred ceeEeeecCCCCe-eecCCCCCCCCceeeEeecC-ccccccccccccccccccc-CceEEccCCCCCccCceEE-EECCE
Q 016328 48 LNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPE-LKWEKMKAAPVPRLDGAAI-QIKNL 123 (391)
Q Consensus 48 ~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~-~~~~~ 123 (391)
-..+..||+.+++ ..+... ...-........+ ..... ....++.+|..+ .+...+...+....-..+. .-+++
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLN--SEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEE--ETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred ceeEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEE--cCCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 3578889998887 333221 0011111111111 11111 123677888877 6666554333212212222 22555
Q ss_pred EEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-C-CEEEEEeCccCCCCCCCcceeEEEeCCCCc
Q 016328 124 LYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G-RYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (391)
Q Consensus 124 vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (391)
.+++++..... ...++.+|..+.+-..+.... . ...++.. + ..|++.++.++ ...++.+|..+..
T Consensus 98 ~l~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~---~--~~~~~~spdg~~l~~~~~~~~------~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 98 LYAISDKVEFG--KSAIYLLPSTGGTPRLMTKNL---P--SYWHGWSPDGKSFTYCGIRDQ------VFDIYSMDIDSGV 164 (297)
T ss_dssp EEEEEECTTTS--SCEEEEEETTCCCCEECCSSS---S--EEEEEECTTSSEEEEEEEETT------EEEEEEEETTTCC
T ss_pred EEEEEEeCCCC--cceEEEEECCCCceEEeecCC---C--ccceEECCCCCEEEEEECCCC------ceEEEEEECCCCc
Confidence 55555533222 345889998877755543222 1 2223332 3 45555554332 3467888888877
Q ss_pred eEECCC
Q 016328 202 WQDLPP 207 (391)
Q Consensus 202 W~~~~~ 207 (391)
...+..
T Consensus 165 ~~~~~~ 170 (297)
T 2ojh_A 165 ETRLTH 170 (297)
T ss_dssp EEECCC
T ss_pred ceEccc
Confidence 766654
No 72
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.68 E-value=1.6 Score=39.66 Aligned_cols=21 Identities=14% Similarity=0.249 Sum_probs=13.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTD 147 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~ 147 (391)
++..++.||.+ ..+.+|+...
T Consensus 117 ~g~~lasg~~d------~~i~v~~~~~ 137 (354)
T 2pbi_B 117 SGCAIACGGLD------NKCSVYPLTF 137 (354)
T ss_dssp TSSEEEEESTT------SEEEEEECCC
T ss_pred CCCEEEEeeCC------CCEEEEEEec
Confidence 55677778765 3466777654
No 73
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.65 E-value=1.9 Score=36.93 Aligned_cols=119 Identities=13% Similarity=-0.015 Sum_probs=59.3
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~ 169 (391)
.+..+|+.+........... ..-.+++.. ++++||... + ..+.+||+.++.......... ....++++
T Consensus 47 ~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-~------~~i~~~d~~~~~~~~~~~~~~---~~p~~i~~ 115 (270)
T 1rwi_B 47 RVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-N------NRVVTLAAGSNNQTVLPFDGL---NYPEGLAV 115 (270)
T ss_dssp EEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-T------TEEEEECTTCSCCEECCCCSC---SSEEEEEE
T ss_pred cEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-C------CEEEEEeCCCceEeeeecCCc---CCCcceEE
Confidence 56677766654433321111 112333333 467888764 1 358899998876554422111 12334444
Q ss_pred e-CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEE-CCEEEEEcc
Q 016328 170 D-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGG 229 (391)
Q Consensus 170 ~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG 229 (391)
. +++||+.... ...+.+||..+........... ..-..++.. +++||+...
T Consensus 116 ~~~g~l~v~~~~--------~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~ 168 (270)
T 1rwi_B 116 DTQGAVYVADRG--------NNRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDT 168 (270)
T ss_dssp CTTCCEEEEEGG--------GTEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEG
T ss_pred CCCCCEEEEECC--------CCEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEEC
Confidence 4 6789987532 3567888877765544322111 111233333 577888753
No 74
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.63 E-value=0.86 Score=42.42 Aligned_cols=143 Identities=8% Similarity=-0.017 Sum_probs=65.0
Q ss_pred CEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC-cccccccccccccccccccCceEEccCCCC
Q 016328 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
+.+++.|+.++ .+..||..+.+ ..+... ...-..+.....+ ....+. ....+..+|..+.+ .+..+..
T Consensus 120 ~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~~h-~~~V~~v~~~~~~~~l~sgs-~D~~i~iwd~~~~~--~~~~~~~ 190 (410)
T 1vyh_C 120 FSVMVSASEDA-----TIKVWDYETGDFERTLKGH-TDSVQDISFDHSGKLLASCS-ADMTIKLWDFQGFE--CIRTMHG 190 (410)
T ss_dssp SSEEEEEESSS-----CEEEEETTTCCCCEEECCC-SSCEEEEEECTTSSEEEEEE-TTSCCCEEETTSSC--EEECCCC
T ss_pred CCEEEEEeCCC-----eEEEEECCCCcEEEEEecc-CCcEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc--eeEEEcC
Confidence 45667777666 56788888776 333321 0000111111111 111111 22345566655433 2222222
Q ss_pred CccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCC
Q 016328 111 PRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRG 187 (391)
Q Consensus 111 ~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~ 187 (391)
....-.++.+ ++..++.|+.+ ..+.+||..+..-... +... ...-..+.. .++.+++.|+.++
T Consensus 191 h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~--~~~h-~~~v~~~~~~~~g~~l~s~s~D~----- 256 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKT--FTGH-REWVRMVRPNQDGTLIASCSNDQ----- 256 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEE--EECC-SSCEEEEEECTTSSEEEEEETTS-----
T ss_pred CCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEE--EeCC-CccEEEEEECCCCCEEEEEcCCC-----
Confidence 2222222222 45666777654 3588899887653321 1110 111112222 3566777777543
Q ss_pred CcceeEEEeCCCCce
Q 016328 188 PTAHTFVLDTETKKW 202 (391)
Q Consensus 188 ~~~~~~~yd~~~~~W 202 (391)
.+..||..+...
T Consensus 257 ---~v~vwd~~~~~~ 268 (410)
T 1vyh_C 257 ---TVRVWVVATKEC 268 (410)
T ss_dssp ---CEEEEETTTCCE
T ss_pred ---eEEEEECCCCce
Confidence 456677766543
No 75
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.57 E-value=1.4 Score=40.66 Aligned_cols=64 Identities=5% Similarity=-0.033 Sum_probs=34.1
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++.+++.|+.+ ..+.+||..+.+-.. .+... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 150 ~~~~l~s~s~d------~~i~iwd~~~~~~~~--~~~~h-~~~v~~~~~~~~~~~l~s~~~d--------~~v~iwd~~~ 212 (420)
T 3vl1_A 150 SGEALISSSQD------MQLKIWSVKDGSNPR--TLIGH-RATVTDIAIIDRGRNVLSASLD--------GTIRLWECGT 212 (420)
T ss_dssp TSSEEEEEETT------SEEEEEETTTCCCCE--EEECC-SSCEEEEEEETTTTEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCcCce--EEcCC-CCcEEEEEEcCCCCEEEEEcCC--------CcEEEeECCC
Confidence 45666777654 358889987654221 11110 1112233333 55666677654 3467788876
Q ss_pred Cc
Q 016328 200 KK 201 (391)
Q Consensus 200 ~~ 201 (391)
.+
T Consensus 213 ~~ 214 (420)
T 3vl1_A 213 GT 214 (420)
T ss_dssp TE
T ss_pred Cc
Confidence 54
No 76
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.56 E-value=2.5 Score=38.01 Aligned_cols=199 Identities=12% Similarity=0.148 Sum_probs=100.2
Q ss_pred ccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCC-CCCCCcceEEEEE
Q 016328 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM-PREMAHSHLGMVT 169 (391)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~~~r~~~~~~~ 169 (391)
+++-.....+|+.+. .|....-.++... .+.+|++|- . ..+++-+-...+|+.+... +.+ .....+++.
T Consensus 17 ~~~s~d~g~~W~~~~-~~~~~~~~~v~~~~~~~~~~~G~-~------g~i~~s~DgG~tW~~~~~~~~~~-~~~~~~i~~ 87 (327)
T 2xbg_A 17 SAIPALDYNPWEAIQ-LPTTATILDMSFIDRHHGWLVGV-N------ATLMETRDGGQTWEPRTLVLDHS-DYRFNSVSF 87 (327)
T ss_dssp -CCCBCSSCCEEEEE-CSCSSCEEEEEESSSSCEEEEET-T------TEEEEESSTTSSCEECCCCCSCC-CCEEEEEEE
T ss_pred eeecCCCCCCceEee-cCCCCcEEEEEECCCCcEEEEcC-C------CeEEEeCCCCCCCeECCCCCCCC-CccEEEEEe
Confidence 333344556898876 3333333333333 457888653 1 1244443345689997532 121 122345555
Q ss_pred eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCC-CCCCCceEE-EECCEEEEEccCCCCccCCCccceEeeee
Q 016328 170 DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQ-LWRGRLHVMGGSGENRYTPEVDHWSLAVK 247 (391)
Q Consensus 170 ~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 247 (391)
.++.+|++|- ...+++-+-.-.+|+.+.... .+-....++ .-++.+|+.|... ..|..
T Consensus 88 ~~~~~~~~g~---------~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g--------~v~~S--- 147 (327)
T 2xbg_A 88 QGNEGWIVGE---------PPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVG--------AIYRT--- 147 (327)
T ss_dssp ETTEEEEEEE---------TTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTC--------CEEEE---
T ss_pred cCCeEEEEEC---------CCeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCc--------cEEEE---
Confidence 6788998752 124555444467999987431 222223333 3467888877421 12211
Q ss_pred cCCcccCCceeecCCCCCCcceeEEEE-CCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-C-cCcEEEcCC
Q 016328 248 DGKPLEKEWRTEIPIPRGGPHRACVVV-DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-D-EMKWKVLPS 324 (391)
Q Consensus 248 ~~d~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~-~~~W~~v~~ 324 (391)
+....+|+.+........ +.++.. +++++++|-. + .+|.-+ . ..+|+.+..
T Consensus 148 --~DgG~tW~~~~~~~~~~~-~~~~~~~~~~~~~~g~~-G----------------------~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 148 --KDSGKNWQALVQEAIGVM-RNLNRSPSGEYVAVSSR-G----------------------SFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp --SSTTSSEEEEECSCCCCE-EEEEECTTSCEEEEETT-S----------------------SEEEEECTTCSSCEEEEC
T ss_pred --cCCCCCCEEeecCCCcce-EEEEEcCCCcEEEEECC-C----------------------cEEEEeCCCCCceeECCC
Confidence 134667887754322222 233333 5566666532 1 256553 3 689999853
Q ss_pred CCCCCCCceeeEE-EECCEEEEEcc
Q 016328 325 MPKPDSHIEFAWV-LVNNSIVIVGG 348 (391)
Q Consensus 325 ~~~~~~~~~~~~~-~~~~~l~i~GG 348 (391)
+.+... ..++ ..++++|+++.
T Consensus 202 -~~~~~~--~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 202 -TTSRRL--HNMGFTPDGRLWMIVN 223 (327)
T ss_dssp -CSSSCE--EEEEECTTSCEEEEET
T ss_pred -CCCCcc--ceeEECCCCCEEEEeC
Confidence 222221 2222 24567877653
No 77
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.55 E-value=0.47 Score=42.06 Aligned_cols=95 Identities=12% Similarity=0.077 Sum_probs=47.1
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
+++.+++|+.+ ..+.+||..+.+......+... ...-.+++.. ++++++.|+.+ ..+..||..+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~d--------g~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAELTSS-APACYALAISPDSKVCFSCCSD--------GNIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEEEECS-SSCEEEEEECTTSSEEEEEETT--------SCEEEEETTT
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeeecccC-CCceEEEEECCCCCEEEEEeCC--------CcEEEEeCCC
Confidence 45666666643 3588999988875443333221 1112233332 55666676643 3577899887
Q ss_pred CceEECCCCCCCCCCceEEE-ECCEEEEEccCC
Q 016328 200 KKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSG 231 (391)
Q Consensus 200 ~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~ 231 (391)
.+....-.... ....+++. -+++.++.|+.+
T Consensus 173 ~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 173 QTLVRQFQGHT-DGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp TEEEEEECCCS-SCEEEEEECTTSSEEEEEETT
T ss_pred Cceeeeeeccc-CceEEEEECCCCCEEEEEecC
Confidence 65332211111 11122222 255666676643
No 78
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.52 E-value=2 Score=38.27 Aligned_cols=72 Identities=7% Similarity=-0.077 Sum_probs=39.6
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
++.+|+.............+.++|+.+.+-...-+... .-...+....++.+|+.+.. ...+..||+.+.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~v~~~~--------~~~v~~~d~~~~ 121 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQTLWFGNTV--------NSAVTAIDAKTG 121 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTTEEEEEETT--------TTEEEEEETTTC
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--CcceEEECCCCCEEEEEecC--------CCEEEEEeCCCC
Confidence 34788766432211113569999998876443222221 11112222234568887653 357889999887
Q ss_pred ce
Q 016328 201 KW 202 (391)
Q Consensus 201 ~W 202 (391)
+-
T Consensus 122 ~~ 123 (353)
T 3vgz_A 122 EV 123 (353)
T ss_dssp CE
T ss_pred ee
Confidence 64
No 79
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.52 E-value=2 Score=37.83 Aligned_cols=64 Identities=8% Similarity=0.045 Sum_probs=36.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
+++.++.|+.++ .+.+||..+.+....-.-.. ..-.+++. -++++++.|+.+ ..+..||..+
T Consensus 34 ~~~~l~s~~~dg------~i~iw~~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~~~d--------~~i~vwd~~~ 96 (312)
T 4ery_A 34 NGEWLASSSADK------LIKIWGAYDGKFEKTISGHK---LGISDVAWSSDSNLLVSASDD--------KTLKIWDVSS 96 (312)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEEEECCCS---SCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEeeCCC------eEEEEeCCCcccchhhccCC---CceEEEEEcCCCCEEEEECCC--------CEEEEEECCC
Confidence 456666776542 37788888777655321111 11223333 256677777653 4577888877
Q ss_pred Cc
Q 016328 200 KK 201 (391)
Q Consensus 200 ~~ 201 (391)
.+
T Consensus 97 ~~ 98 (312)
T 4ery_A 97 GK 98 (312)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.46 E-value=0.53 Score=42.16 Aligned_cols=103 Identities=5% Similarity=-0.072 Sum_probs=51.9
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCCCcceEEEEE-----eCCEEEEEeCccCCCCCCCcceeE
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVT-----DGRYIYVVTGQYGPQCRGPTAHTF 193 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~r~~~~~~~-----~~~~iyv~GG~~~~~~~~~~~~~~ 193 (391)
++..++.|+.+ ..+.+||+.+.+ ...+........+...+++. .++.+++.|+.+ ..+.
T Consensus 128 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--------~~i~ 193 (357)
T 3i2n_A 128 GAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN--------GDIK 193 (357)
T ss_dssp CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT--------SEEE
T ss_pred CccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC--------CeEE
Confidence 45566777654 248889988764 33332222211122233331 466677777642 4678
Q ss_pred EEeCCCCceEECCCCCCCCCCceEEEE----CCEEEEEccCCCCccCCCccceEe
Q 016328 194 VLDTETKKWQDLPPLPVPRYAPATQLW----RGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 194 ~yd~~~~~W~~~~~~~~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
.||..+.+-...... .....+++.. ++..++.|+.++ .+..|++
T Consensus 194 i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~ 241 (357)
T 3i2n_A 194 LFDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLEG-----KFHVFDM 241 (357)
T ss_dssp EEETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEESTT-----EEEEEEE
T ss_pred EEECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCCC-----eEEEEeC
Confidence 899887653222111 1222233333 566777776543 3555664
No 81
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=94.46 E-value=0.75 Score=43.03 Aligned_cols=101 Identities=7% Similarity=-0.027 Sum_probs=53.9
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE-CC-EEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMV 168 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~-~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~ 168 (391)
.++.+|..+.+...+...+. ...+.+.- ++ +|++.+..++ ...++.+|+.+.+...+...+. .....+
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~----~~~~~~ 273 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRS----NNTEPT 273 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSS----CEEEEE
T ss_pred EEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCC----cccceE
Confidence 67788887777665543322 11222222 44 4554554332 2359999999888766543322 112233
Q ss_pred E-eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC
Q 016328 169 T-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (391)
Q Consensus 169 ~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~ 206 (391)
. -+++.+++++... + ...++.+|..+.+-+.+.
T Consensus 274 ~spdg~~l~~~s~~~-g----~~~i~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 274 WFPDSQNLAFTSDQA-G----RPQVYKVNINGGAPQRIT 307 (415)
T ss_dssp ECTTSSEEEEEECTT-S----SCEEEEEETTSSCCEECC
T ss_pred ECCCCCEEEEEECCC-C----CcEEEEEECCCCCEEEEe
Confidence 3 2454444443211 1 457899999887655543
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.38 E-value=0.92 Score=42.49 Aligned_cols=145 Identities=7% Similarity=-0.054 Sum_probs=67.2
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCC-ceeeEe-ecC-cccccccccccccccccccCceEEccC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKG-ENIGVK-TKK-DVVPKRILPATFQDLPAPELKWEKMKA 107 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~-~g~~~~-~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~ 107 (391)
++.+.+.|+.++ .+..||..+.+ ..+....+... .++... ..+ ....+. ....+..+|..++....+..
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~ 204 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-MEGTTRLQDFKGNILRVFAS 204 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC-SSSCEEEEETTSCEEEEEEC
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe-CCCEEEEeeccCCceeEEec
Confidence 456777887776 57788887765 22222111111 112111 011 111111 22345566766554433322
Q ss_pred CCCCc-cCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCC
Q 016328 108 APVPR-LDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGP 183 (391)
Q Consensus 108 ~p~~r-~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~ 183 (391)
..... ...++... ++.+++.|+.+ ..+.++|...+.-.. +... ...-.+++.. +..+++.|+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~~~~---~~~h-~~~v~~v~~~p~~~~~~~s~s~d~- 273 (435)
T 4e54_B 205 SDTINIWFCSLDVSASSRMVVTGDNV------GNVILLNMDGKELWN---LRMH-KKKVTHVALNPCCDWFLATASVDQ- 273 (435)
T ss_dssp CSSCSCCCCCEEEETTTTEEEEECSS------SBEEEEESSSCBCCC---SBCC-SSCEEEEEECTTCSSEEEEEETTS-
T ss_pred cCCCCccEEEEEECCCCCEEEEEeCC------CcEeeeccCcceeEE---Eecc-cceEEeeeecCCCceEEEEecCcc-
Confidence 22111 12223322 56777777754 347888987643222 2211 1111233332 345777777544
Q ss_pred CCCCCcceeEEEeCCCCc
Q 016328 184 QCRGPTAHTFVLDTETKK 201 (391)
Q Consensus 184 ~~~~~~~~~~~yd~~~~~ 201 (391)
.+..||..+.+
T Consensus 274 -------~v~iwd~~~~~ 284 (435)
T 4e54_B 274 -------TVKIWDLRQVR 284 (435)
T ss_dssp -------BCCEEETTTCC
T ss_pred -------eeeEEeccccc
Confidence 34567876543
No 83
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.34 E-value=2.5 Score=38.61 Aligned_cols=98 Identities=8% Similarity=0.028 Sum_probs=48.1
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCC---CcceEEEEEe-C-CEEEEEeCccCCCCCCCcceeEEEe
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM---AHSHLGMVTD-G-RYIYVVTGQYGPQCRGPTAHTFVLD 196 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~---~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~yd 196 (391)
+.+++.|+.+ ..+.+||..+.+-...-..+.+. ...-.+++.. + ..+++.|+.++. ...+..||
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~-----~~~i~~~d 246 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN-----DPSILIWD 246 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS-----SCCCCEEE
T ss_pred CcEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC-----CceEEEEe
Confidence 5677777754 34889999887654422222100 1112233333 2 357777765431 12567889
Q ss_pred CCCCceEECCCCC--CCCCCceEEEE--CCEEEEEccCC
Q 016328 197 TETKKWQDLPPLP--VPRYAPATQLW--RGRLHVMGGSG 231 (391)
Q Consensus 197 ~~~~~W~~~~~~~--~~r~~~~~~~~--~~~iyv~GG~~ 231 (391)
..+.. ..+..+. ....-.+++.. ++++++.|+.+
T Consensus 247 ~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d 284 (416)
T 2pm9_A 247 LRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD 284 (416)
T ss_dssp TTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS
T ss_pred CCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCC
Confidence 87643 1111222 11111222222 56777777754
No 84
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.13 E-value=2.6 Score=40.83 Aligned_cols=26 Identities=15% Similarity=0.074 Sum_probs=15.9
Q ss_pred EEECCEEEEEccccCCCCcccceeEecceEEEecCccc
Q 016328 337 VLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 337 ~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~ 374 (391)
...++..++.|+.++ .+..||..+.+
T Consensus 305 ~~~~~~~l~~~~~~g------------~i~~~d~~~~~ 330 (615)
T 1pgu_A 305 VATGNGRIISLSLDG------------TLNFYELGHDE 330 (615)
T ss_dssp EEEETTEEEEEETTS------------CEEEEETTEEE
T ss_pred EeCCCCeEEEEECCC------------CEEEEECCCCc
Confidence 334677777777653 46667766544
No 85
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.05 E-value=3.6 Score=37.89 Aligned_cols=95 Identities=12% Similarity=0.083 Sum_probs=51.8
Q ss_pred CceEEccCCCCCccCceEEEE---CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCC---CCCCCc-------ceEE
Q 016328 100 LKWEKMKAAPVPRLDGAAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM---PREMAH-------SHLG 166 (391)
Q Consensus 100 ~~W~~~~~~p~~r~~~~~~~~---~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~~~r-------~~~~ 166 (391)
.+|+...+.+....-++++.. .+.||+.+..... -.-+++.+-...+|+.+... +....+ .-.+
T Consensus 43 ~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~---g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~ 119 (394)
T 3b7f_A 43 RTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHL---GPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFW 119 (394)
T ss_dssp CSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--C---CEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEE
T ss_pred CCceECCccCCCCceEEEEECCCCCCeEEEEecCCCC---CccEEEeCCCCCCceECCccccCCCcccccccccccceeE
Confidence 589876422221222333333 4578886532111 12477777778899987532 211111 1123
Q ss_pred EEEe----CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC
Q 016328 167 MVTD----GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (391)
Q Consensus 167 ~~~~----~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~ 206 (391)
++.. .+.||+.+- ...+++.+-...+|+.+.
T Consensus 120 l~~~~~~~~~~l~~g~~---------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 120 LTPGHASEPGTWYAGTS---------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEECCTTSTTCEEEEEE---------TTEEEEESSTTSBCEECH
T ss_pred EEeCCCCCCCEEEEEec---------CCcEEEEcCCCCCeEECc
Confidence 4443 577887542 245788888889999885
No 86
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.00 E-value=3.3 Score=37.19 Aligned_cols=196 Identities=13% Similarity=0.092 Sum_probs=97.1
Q ss_pred ccCceEEccCC-CCCc-cCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCC-CCCCcceEEEE-EeCCE
Q 016328 98 PELKWEKMKAA-PVPR-LDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP-REMAHSHLGMV-TDGRY 173 (391)
Q Consensus 98 ~~~~W~~~~~~-p~~r-~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~~~r~~~~~~-~~~~~ 173 (391)
...+|+.+... +.+. ...++...++.+|++|-. ..+++-+-.-.+|+.+.... .| .. ...++ .-++.
T Consensus 64 gG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~-~~-~~~i~~~~~~~ 134 (327)
T 2xbg_A 64 GGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLP-GS-PRLIKALGNGS 134 (327)
T ss_dssp TTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET-------TEEEEESSTTSSCEECCCCTTCS-SC-EEEEEEEETTE
T ss_pred CCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC-------CeEEEECCCCCCceECccccCCC-CC-eEEEEEECCCC
Confidence 34589987532 2222 233444456788887521 12444333357899976432 11 11 23333 45788
Q ss_pred EEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEE-CCEEEEEccCCCCccCCCccceEeeeecCCcc
Q 016328 174 IYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPL 252 (391)
Q Consensus 174 iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~ 252 (391)
+|+.|.. ..+++-+-.-.+|+.+.... +...+.++.. ++++|++|- .+ ..|... |..
T Consensus 135 ~~~~~~~---------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~-~G-------~~~~S~----d~g 192 (327)
T 2xbg_A 135 AEMITNV---------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSS-RG-------SFYSTW----EPG 192 (327)
T ss_dssp EEEEETT---------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEET-TS-------SEEEEE----CTT
T ss_pred EEEEeCC---------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEEC-CC-------cEEEEe----CCC
Confidence 8887741 23455544567899886422 2233344433 456666652 21 112211 222
Q ss_pred cCCceeecCCCCCCcceeEEE-ECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEE-c-CcCcEEEcCCCCCCC
Q 016328 253 EKEWRTEIPIPRGGPHRACVV-VDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYML-D-DEMKWKVLPSMPKPD 329 (391)
Q Consensus 253 ~~~W~~~~~~p~~~~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-d-~~~~W~~v~~~~~~~ 329 (391)
...|+.+....... ...++. -++.+|+.+.. + .++.. + ...+|+.+...+.+.
T Consensus 193 G~tW~~~~~~~~~~-~~~~~~~~~g~~~~~~~~-G----------------------~~~~s~~D~G~tW~~~~~~~~~~ 248 (327)
T 2xbg_A 193 QTAWEPHNRTTSRR-LHNMGFTPDGRLWMIVNG-G----------------------KIAFSDPDNSENWGELLSPLRRN 248 (327)
T ss_dssp CSSCEEEECCSSSC-EEEEEECTTSCEEEEETT-T----------------------EEEEEETTEEEEECCCBCTTSSC
T ss_pred CCceeECCCCCCCc-cceeEECCCCCEEEEeCC-c----------------------eEEEecCCCCCeeEeccCCcccC
Confidence 57888774322222 223332 35678877642 1 14554 2 367898875321122
Q ss_pred CCceeeEEEE-CCEEEEEcc
Q 016328 330 SHIEFAWVLV-NNSIVIVGG 348 (391)
Q Consensus 330 ~~~~~~~~~~-~~~l~i~GG 348 (391)
...-.+++.. ++.+|++|+
T Consensus 249 ~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 249 SVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp CSCEEEEEESSSSCEEEEES
T ss_pred CcceEEEEecCCCEEEEEeC
Confidence 1111222222 578888876
No 87
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.91 E-value=0.58 Score=42.01 Aligned_cols=23 Identities=26% Similarity=0.210 Sum_probs=15.8
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (391)
++.+++.|+.++ .+..||..+.+
T Consensus 43 ~~~~l~~~~~dg-----~i~vwd~~~~~ 65 (369)
T 3zwl_B 43 EGDLLFSCSKDS-----SASVWYSLNGE 65 (369)
T ss_dssp TSCEEEEEESSS-----CEEEEETTTCC
T ss_pred CCCEEEEEeCCC-----EEEEEeCCCch
Confidence 455666676555 56788887776
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.91 E-value=3.5 Score=37.12 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=28.4
Q ss_pred EEEEc-CcCcEEEcCCCCCCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecCcccc
Q 016328 310 VYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVS 375 (391)
Q Consensus 310 v~~~d-~~~~W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~~ 375 (391)
+|.++ .+.+++.+..++... .....+...+++.+++++..... ..+|.+|+++...
T Consensus 286 v~~~~~~~g~~~~~~~~~~g~-~~~~~~~spdg~~l~~~~~~~~~---------v~v~~~d~~~g~~ 342 (361)
T 3scy_A 286 IFKVDETNGTLTKVGYQLTGI-HPRNFIITPNGKYLLVACRDTNV---------IQIFERDQATGLL 342 (361)
T ss_dssp EEEECTTTCCEEEEEEEECSS-CCCEEEECTTSCEEEEEETTTTE---------EEEEEECTTTCCE
T ss_pred EEEEcCCCCcEEEeeEecCCC-CCceEEECCCCCEEEEEECCCCC---------EEEEEEECCCCcE
Confidence 56665 567777665544311 11122233466655555433221 2577788766653
No 89
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.87 E-value=5.2 Score=39.85 Aligned_cols=64 Identities=16% Similarity=0.018 Sum_probs=35.1
Q ss_pred ceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCC-ceEEC
Q 016328 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK-KWQDL 205 (391)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~-~W~~~ 205 (391)
..++++|+.+.+-..+...... ...-..++. -+++.++++..+... ....++.+|+.+. ..+.+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPK-EKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCT-TCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETTTCCEEEEE
T ss_pred eEEEEEECCCCceEeeccCCCC-ceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECCCCceeeEE
Confidence 5699999988876555322111 122222333 255444444333222 2468999999987 66554
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.75 E-value=1.7 Score=38.40 Aligned_cols=68 Identities=15% Similarity=0.154 Sum_probs=34.2
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCC-CCeeeCC--CCCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEe
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTD-NTWGGRF--DMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLD 196 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~--~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd 196 (391)
+.+|+.+..+ ..+.+||+.+ .+..... ....+.......++.. +..+|+.+.. ...+..||
T Consensus 141 ~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--------~~~i~~~~ 206 (343)
T 1ri6_A 141 RTLWVPALKQ------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--------NSSVDVWE 206 (343)
T ss_dssp SEEEEEEGGG------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--------TTEEEEEE
T ss_pred CEEEEecCCC------CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC--------CCEEEEEE
Confidence 4677765322 3588999887 6665322 1111101111223332 3457777532 35677888
Q ss_pred CC--CCceE
Q 016328 197 TE--TKKWQ 203 (391)
Q Consensus 197 ~~--~~~W~ 203 (391)
.. +.+++
T Consensus 207 ~~~~~g~~~ 215 (343)
T 1ri6_A 207 LKDPHGNIE 215 (343)
T ss_dssp SSCTTSCCE
T ss_pred ecCCCCcEE
Confidence 74 34443
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.73 E-value=1.6 Score=39.82 Aligned_cols=52 Identities=12% Similarity=-0.084 Sum_probs=26.7
Q ss_pred ccccccccccCc------eEEccCCCCC---ccCceEEEE-----CCEE-EEEeccCCCCCCcceeEEEECCC
Q 016328 90 ATFQDLPAPELK------WEKMKAAPVP---RLDGAAIQI-----KNLL-YVFAGYGSIDYVHSHVDIYNFTD 147 (391)
Q Consensus 90 ~~~~~~d~~~~~------W~~~~~~p~~---r~~~~~~~~-----~~~v-yv~GG~~~~~~~~~~~~~yd~~~ 147 (391)
..+..||..+.+ +..+...+.. ..-.++... ++.. ++.|+.+ ..+.+||..+
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~ 157 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------GTTYIWKFHP 157 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT------SCEEEEEEES
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC------CcEEEEeCCc
Confidence 356677776665 5555443311 112223333 3455 7777654 2377777765
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.61 E-value=3.7 Score=37.98 Aligned_cols=95 Identities=9% Similarity=0.078 Sum_probs=51.6
Q ss_pred cccccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEE
Q 016328 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (391)
Q Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~ 166 (391)
...+..+|..+.+...+-.+..+...-.++.+ ++..++.|+.+ ..+.+||..+.+-... +.. ......
T Consensus 124 d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~~~~~--~~~--h~~~v~ 193 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRN--MTS--HSARVG 193 (420)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEE--ECC--CSSCEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCcEEEE--EeC--CCCceE
Confidence 44677778877766554444333222222333 56777777764 3488899887654332 222 111223
Q ss_pred EEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCc
Q 016328 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (391)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (391)
....++.+++.|+.+ ..+..+|.....
T Consensus 194 ~~s~~~~~l~sgs~d--------~~i~~~d~~~~~ 220 (420)
T 4gga_A 194 SLSWNSYILSSGSRS--------GHIHHHDVRVAE 220 (420)
T ss_dssp EEEEETTEEEEEETT--------SEEEEEETTSSS
T ss_pred EEeeCCCEEEEEeCC--------CceeEeeecccc
Confidence 344566677777653 345667765543
No 93
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=93.61 E-value=1 Score=40.38 Aligned_cols=63 Identities=6% Similarity=-0.088 Sum_probs=37.6
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE---eCCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT---DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
++..++.|+.+ ..+.+||..+.+-........ .-.+++. .++.+++.|+.+ ..+..||.
T Consensus 97 ~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~l~~~~~d--------g~i~vwd~ 158 (368)
T 3mmy_A 97 DGSKVFTASCD------KTAKMWDLSSNQAIQIAQHDA----PVKTIHWIKAPNYSCVMTGSWD--------KTLKFWDT 158 (368)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECSS----CEEEEEEEECSSCEEEEEEETT--------SEEEEECS
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCCceeeccccC----ceEEEEEEeCCCCCEEEEccCC--------CcEEEEEC
Confidence 45566666654 358899998887655322221 1223333 366777777753 45778888
Q ss_pred CCCc
Q 016328 198 ETKK 201 (391)
Q Consensus 198 ~~~~ 201 (391)
.+.+
T Consensus 159 ~~~~ 162 (368)
T 3mmy_A 159 RSSN 162 (368)
T ss_dssp SCSS
T ss_pred CCCc
Confidence 7654
No 94
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.59 E-value=0.79 Score=41.10 Aligned_cols=66 Identities=9% Similarity=-0.007 Sum_probs=36.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++++++.|+.+ ..+.+||..+.+-... +... ...-.+++.. +++.++.|+.+ ..+..||..+
T Consensus 43 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~ 105 (369)
T 3zwl_B 43 EGDLLFSCSKD------SSASVWYSLNGERLGT--LDGH-TGTIWSIDVDCFTKYCVTGSAD--------YSIKLWDVSN 105 (369)
T ss_dssp TSCEEEEEESS------SCEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------TEEEEEETTT
T ss_pred CCCEEEEEeCC------CEEEEEeCCCchhhhh--hhhc-CCcEEEEEEcCCCCEEEEEeCC--------CeEEEEECCC
Confidence 45666677654 2488899877654332 2211 1112233333 45666676643 4577889887
Q ss_pred CceE
Q 016328 200 KKWQ 203 (391)
Q Consensus 200 ~~W~ 203 (391)
.+-.
T Consensus 106 ~~~~ 109 (369)
T 3zwl_B 106 GQCV 109 (369)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 6543
No 95
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=93.53 E-value=2 Score=39.07 Aligned_cols=23 Identities=9% Similarity=-0.005 Sum_probs=15.9
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (391)
++.+++.|+.++ .+..||..+..
T Consensus 55 ~~~~l~~~~~dg-----~i~iw~~~~~~ 77 (408)
T 4a11_B 55 EGRYMLSGGSDG-----VIVLYDLENSS 77 (408)
T ss_dssp TCCEEEEEETTS-----CEEEEECCCCS
T ss_pred CCCEEEEEcCCC-----eEEEEECCCCc
Confidence 566777777665 56778887765
No 96
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.52 E-value=3.7 Score=36.24 Aligned_cols=124 Identities=4% Similarity=-0.087 Sum_probs=58.6
Q ss_pred cccccccc-ccCceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCC-------eeeCCCCCCCCC
Q 016328 90 ATFQDLPA-PELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT-------WGGRFDMPREMA 161 (391)
Q Consensus 90 ~~~~~~d~-~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~~~ 161 (391)
..+..+|. .+.+-..+...+....-.++....+..++.|+.+ ..+.+||+.+.. .+.+..+.. .
T Consensus 79 g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~ 150 (342)
T 1yfq_A 79 GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKV--K 150 (342)
T ss_dssp SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSS--C
T ss_pred CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEee--C
Confidence 36777777 6665554443111111122222225556666654 347788876400 222333332 2
Q ss_pred cceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCC-Cc--eEECCCCCCCCCCceEEEE--CCEEEEEccCC
Q 016328 162 HSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTET-KK--WQDLPPLPVPRYAPATQLW--RGRLHVMGGSG 231 (391)
Q Consensus 162 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~-~~--W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~ 231 (391)
..-.+++...+. ++.|+. ...+..||..+ .. ...... +....-.+++.. ++++++.|+.+
T Consensus 151 ~~v~~~~~~~~~-l~~~~~--------d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGMN--------NSQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp CCEEEEEECSSE-EEEEES--------TTEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETT
T ss_pred CceEEEEecCCc-EEEEeC--------CCeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecC
Confidence 233455556666 555543 34678899877 32 221111 111112223333 46777777654
No 97
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.52 E-value=3.4 Score=40.21 Aligned_cols=198 Identities=11% Similarity=0.108 Sum_probs=89.9
Q ss_pred cCEEEEecCCCCcccceeEeeecC--CCCe--eecCCCCCCCCceeeEee----cC-cccccccccccccccccccCceE
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSP--YHNS--IILPNNGPQKGENIGVKT----KK-DVVPKRILPATFQDLPAPELKWE 103 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~--~~~~--~~lp~~~~r~~~g~~~~~----~~-~~~~~~~~~~~~~~~d~~~~~W~ 103 (391)
+.+||+.+. + +.+..||+ .+.+ ..++. .....+++..- .+ ........+..+..+|..+.+-.
T Consensus 190 g~~l~v~~~-d-----~~V~v~D~~~~t~~~~~~i~~--g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~ 261 (543)
T 1nir_A 190 GRYLLVIGR-D-----ARIDMIDLWAKEPTKVAEIKI--GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 261 (543)
T ss_dssp SCEEEEEET-T-----SEEEEEETTSSSCEEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEE
T ss_pred CCEEEEECC-C-----CeEEEEECcCCCCcEEEEEec--CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccc
Confidence 345666653 2 47888998 6766 44443 11112333221 12 22233334456667776665432
Q ss_pred E-ccC--C--------CCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-e
Q 016328 104 K-MKA--A--------PVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-D 170 (391)
Q Consensus 104 ~-~~~--~--------p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~ 170 (391)
+ ++. + |.+|....+..- +..+|+.... ...+.++|..+.+-..+..++. .+.-+.++. -
T Consensus 262 ~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~------~g~i~vvd~~~~~~l~~~~i~~--~~~~~~~~~sp 333 (543)
T 1nir_A 262 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE------TGKVLLVNYKDIDNLTVTSIGA--APFLHDGGWDS 333 (543)
T ss_dssp EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT------TTEEEEEECTTSSSCEEEEEEC--CSSCCCEEECT
T ss_pred eeecccCcccCccccccCCceEEEEECCCCCEEEEEECC------CCeEEEEEecCCCcceeEEecc--CcCccCceECC
Confidence 2 111 1 112222222222 3455555422 2458889887653211111111 122222333 2
Q ss_pred C-CEEEEEeCccCCCCCCCcceeEEEeCCCCceEEC---CCCCCCCCCceEEEE-CCEEEEEccCCCCccCCCccceEee
Q 016328 171 G-RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL---PPLPVPRYAPATQLW-RGRLHVMGGSGENRYTPEVDHWSLA 245 (391)
Q Consensus 171 ~-~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~---~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~ 245 (391)
+ .++|+.+.. .+.+..+|.++.+-... ...|.+-.......- ++.+|+.+...+ ..+..|+.
T Consensus 334 dg~~l~va~~~--------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d----~~V~v~d~- 400 (543)
T 1nir_A 334 SHRYFMTAANN--------SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD----GSISLIGT- 400 (543)
T ss_dssp TSCEEEEEEGG--------GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS----SEEEEEEC-
T ss_pred CCCEEEEEecC--------CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC----ceEEEEEe-
Confidence 3 456665432 46778899998764332 233333222222221 367888764321 23445543
Q ss_pred eecCCcc---cCCceeecCCC
Q 016328 246 VKDGKPL---EKEWRTEIPIP 263 (391)
Q Consensus 246 ~~~~d~~---~~~W~~~~~~p 263 (391)
++. ...|+.+..++
T Consensus 401 ----~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 401 ----DPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp ----CTTTCTTTBTSEEEEEE
T ss_pred ----CCCCCchhcCeEEEEEE
Confidence 231 12387765554
No 98
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.43 E-value=1.1 Score=40.90 Aligned_cols=141 Identities=6% Similarity=-0.109 Sum_probs=64.7
Q ss_pred EEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCC-ceeeEee-c-CcccccccccccccccccccCceEEccCCC
Q 016328 35 FFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKG-ENIGVKT-K-KDVVPKRILPATFQDLPAPELKWEKMKAAP 109 (391)
Q Consensus 35 ~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~-~g~~~~~-~-~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 109 (391)
.+++.|+.++ .+..||..+.+ ..+........ ..+.... . .....+ .....+..+|........+....
T Consensus 87 ~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~ 160 (383)
T 3ei3_B 87 TTVAVGSKGG-----DIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS-SIRGATTLRDFSGSVIQVFAKTD 160 (383)
T ss_dssp TEEEEEEBTS-----CEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE-ETTTEEEEEETTSCEEEEEECCC
T ss_pred CEEEEEcCCC-----eEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE-eCCCEEEEEECCCCceEEEeccC
Confidence 4666676555 57788888766 22221111111 1222211 1 111111 12235566666655444443222
Q ss_pred CCccC-ceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCE-EEEEeCccCCCC
Q 016328 110 VPRLD-GAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRY-IYVVTGQYGPQC 185 (391)
Q Consensus 110 ~~r~~-~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~ 185 (391)
..... .+++.. ++..++.|+.+ ..+.+||+....-..+.... ..-.+++.. ++. +++.|+.+
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~s~~~d---- 226 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHK----AKVTHAEFNPRCDWLMATSSVD---- 226 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSS----SCEEEEEECSSCTTEEEEEETT----
T ss_pred CCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCC----CcEEEEEECCCCCCEEEEEeCC----
Confidence 11111 222222 45666777654 35888998544333322111 112233333 333 77777653
Q ss_pred CCCcceeEEEeCCC
Q 016328 186 RGPTAHTFVLDTET 199 (391)
Q Consensus 186 ~~~~~~~~~yd~~~ 199 (391)
..+..||..+
T Consensus 227 ----~~i~iwd~~~ 236 (383)
T 3ei3_B 227 ----ATVKLWDLRN 236 (383)
T ss_dssp ----SEEEEEEGGG
T ss_pred ----CEEEEEeCCC
Confidence 4567788776
No 99
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.38 E-value=3.1 Score=37.77 Aligned_cols=107 Identities=7% Similarity=-0.052 Sum_probs=54.2
Q ss_pred EECCEEEEEeccCCCCCCcceeEEEECCCCC----eeeCCCCCCCCCcceEEEEE-eC----C---EEEEEeCccCCCCC
Q 016328 119 QIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT----WGGRFDMPREMAHSHLGMVT-DG----R---YIYVVTGQYGPQCR 186 (391)
Q Consensus 119 ~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~p~~~~r~~~~~~~-~~----~---~iyv~GG~~~~~~~ 186 (391)
.+...+++.|+.+ ..+.+||..+.+ +..+..+... ...-.+++. -+ + .+++.|+.+
T Consensus 23 ~~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~g~~~~~l~s~~~d----- 90 (397)
T 1sq9_A 23 SACNSFTVSCSGD------GYLKVWDNKLLDNENPKDKSYSHFVH-KSGLHHVDVLQAIERDAFELCLVATTSFS----- 90 (397)
T ss_dssp EECSSEEEEEETT------SEEEEEESBCCTTCCGGGGEEEEECC-TTCEEEEEEEEEEETTTEEEEEEEEEETT-----
T ss_pred EecCCeEEEEcCC------CEEEEEECCCcccccCCCcceEEecC-CCcEEEEEEecccccCCccccEEEEEcCC-----
Confidence 3344667777654 358888888776 3222222111 111123333 23 5 777777754
Q ss_pred CCcceeEEEeCCCCc------eEECCCCCCC---CCCceEEEE-----CCEE-EEEccCCCCccCCCccceEee
Q 016328 187 GPTAHTFVLDTETKK------WQDLPPLPVP---RYAPATQLW-----RGRL-HVMGGSGENRYTPEVDHWSLA 245 (391)
Q Consensus 187 ~~~~~~~~yd~~~~~------W~~~~~~~~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~~~~~~~~ 245 (391)
..+..||..+.. +..+...+.. ..-.+++.. ++.. ++.|+.++ .+..|++.
T Consensus 91 ---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~ 156 (397)
T 1sq9_A 91 ---GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TTYIWKFH 156 (397)
T ss_dssp ---SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CEEEEEEE
T ss_pred ---CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cEEEEeCC
Confidence 346677777665 6665543211 222233333 4556 77776543 35667653
No 100
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.32 E-value=1.3 Score=39.04 Aligned_cols=23 Identities=4% Similarity=-0.029 Sum_probs=16.5
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (391)
++.+.+.|+.++ .+..||.++..
T Consensus 24 ~~~~l~s~~~dg-----~v~lWd~~~~~ 46 (304)
T 2ynn_A 24 TEPWVLTTLYSG-----RVELWNYETQV 46 (304)
T ss_dssp SSSEEEEEETTS-----EEEEEETTTTE
T ss_pred CCCEEEEEcCCC-----cEEEEECCCCc
Confidence 455666777665 67889988876
No 101
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.28 E-value=1.3 Score=47.75 Aligned_cols=93 Identities=9% Similarity=-0.063 Sum_probs=46.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
++..+++|+.+ ..+.+||..+.+......-.. .........-+++.++.|+.+ ..+..||..+.
T Consensus 972 ~g~~l~~g~~~------g~i~i~d~~~~~~~~~~~~h~--~~v~~l~~s~dg~~l~s~~~d--------g~i~vwd~~~~ 1035 (1249)
T 3sfz_A 972 HLEYVAFGDED------GAIKIIELPNNRVFSSGVGHK--KAVRHIQFTADGKTLISSSED--------SVIQVWNWQTG 1035 (1249)
T ss_dssp TSSEEEEEETT------SCCEEEETTTTSCEEECCCCS--SCCCCEEECSSSSCEEEECSS--------SBEEEEETTTT
T ss_pred CCCEEEEEcCC------CCEEEEEcCCCceeeecccCC--CceEEEEECCCCCEEEEEcCC--------CEEEEEECCCC
Confidence 45566666543 247888988765433211111 111112222356667777653 45778999887
Q ss_pred ceEECCCCCCCCCCceEEEECCEEEEEccCC
Q 016328 201 KWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (391)
Q Consensus 201 ~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 231 (391)
+...+.. ......+++...+..++.|+.+
T Consensus 1036 ~~~~~~~--~~~~v~~~~~~~~~~l~~~~~d 1064 (1249)
T 3sfz_A 1036 DYVFLQA--HQETVKDFRLLQDSRLLSWSFD 1064 (1249)
T ss_dssp EEECCBC--CSSCEEEEEECSSSEEEEEESS
T ss_pred ceEEEec--CCCcEEEEEEcCCCcEEEEECC
Confidence 7654332 1222223333334445555543
No 102
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.27 E-value=4.6 Score=40.86 Aligned_cols=174 Identities=6% Similarity=-0.072 Sum_probs=76.7
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC-cccccccccccccccccccCceEEccCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAP 109 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 109 (391)
++.+.++|+.++ .+..||..+++ ..+... ...-..+.....+ ....+. ....+..+|..+.+.... +.
T Consensus 24 ~~~~la~~~~~g-----~v~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~--~~ 94 (814)
T 3mkq_A 24 TEPWVLTTLYSG-----RVEIWNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVGS-DDFRIRVFNYNTGEKVVD--FE 94 (814)
T ss_dssp SSSEEEEEETTS-----EEEEEETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEEE-TTSEEEEEETTTCCEEEE--EE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCceEEEEecC-CCcEEEEEEeCCCCEEEEEe-CCCeEEEEECCCCcEEEE--Ee
Confidence 455556666444 67889988876 333321 1011111111111 111111 133566777666554321 11
Q ss_pred CCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCC
Q 016328 110 VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQC 185 (391)
Q Consensus 110 ~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~ 185 (391)
.....-....+ ++..++.|+.+ ..+.+||..++ |.....+... ...-.+++.. ++.+++.|+.+
T Consensus 95 ~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~-~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~d---- 162 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENN-WALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLD---- 162 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETT------SEEEEEEGGGT-SEEEEEEECC-SSCEEEEEEETTEEEEEEEEETT----
T ss_pred cCCCCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCC-ceEEEEEcCC-CCcEEEEEEEcCCCCEEEEEeCC----
Confidence 11111122222 44555666543 34888898765 2221111110 1112333443 46677777653
Q ss_pred CCCcceeEEEeCCCCceEECCCCCCCCCCceEEEE---CCEEEEEccCC
Q 016328 186 RGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW---RGRLHVMGGSG 231 (391)
Q Consensus 186 ~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~ 231 (391)
..+..||..+.+-...-..........++.. ++.+++.|+.+
T Consensus 163 ----g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 207 (814)
T 3mkq_A 163 ----RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD 207 (814)
T ss_dssp ----SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT
T ss_pred ----CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC
Confidence 4577888765432111111111222223322 56677777654
No 103
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.12 E-value=1.4 Score=39.23 Aligned_cols=69 Identities=14% Similarity=0.200 Sum_probs=37.4
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-C--CEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G--RYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
+.+++.|+.+ ..+.++|+.+.+|+....+... ...-.+++.. + +.+++.|+.++ .+..||..
T Consensus 71 ~~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYD------RKVIIWREENGTWEKSHEHAGH-DSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYT 135 (316)
T ss_dssp SSCEEEEETT------SCEEEECCSSSCCCEEEEECCC-SSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEEC
T ss_pred CCEEEEEECC------CEEEEEECCCCcceEEEEccCC-CCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecC
Confidence 4566677654 2478889888777654333221 1111233332 2 56777777643 35566766
Q ss_pred CC-ceEEC
Q 016328 199 TK-KWQDL 205 (391)
Q Consensus 199 ~~-~W~~~ 205 (391)
+. .|...
T Consensus 136 ~~~~~~~~ 143 (316)
T 3bg1_A 136 GEGQWEVK 143 (316)
T ss_dssp SSSCEEEC
T ss_pred CCCCccee
Confidence 54 46543
No 104
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.98 E-value=5.3 Score=36.40 Aligned_cols=106 Identities=10% Similarity=0.118 Sum_probs=51.9
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCC------eee-CCCCCCCCCcceEEEEEe-C-CEEEEEeCccCCCCCCCccee
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNT------WGG-RFDMPREMAHSHLGMVTD-G-RYIYVVTGQYGPQCRGPTAHT 192 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~------W~~-~~~~p~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~ 192 (391)
+.+++.|+.+ ..+.+||..+.+ -.. +...... ...-.+++.. + +.+++.|+.+ ..+
T Consensus 126 ~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~d--------g~v 190 (416)
T 2pm9_A 126 DNVLASGGNN------GEIFIWDMNKCTESPSNYTPLTPGQSMSS-VDEVISLAWNQSLAHVFASAGSS--------NFA 190 (416)
T ss_dssp TTBEEEECSS------SCEEBCBTTTTSSCTTTCCCBCCCCSCCS-SCCCCEEEECSSCTTEEEEESSS--------SCE
T ss_pred CCEEEEEcCC------CeEEEEECCCCccccccccccccccccCC-CCCeeEEEeCCCCCcEEEEEcCC--------CCE
Confidence 5677777754 347888888765 111 1111111 1112233333 2 5677777753 347
Q ss_pred EEEeCCCCceEECCCCCC-----CCCCceEEEE-C-CEEEEEccCCCCccCCCccceEe
Q 016328 193 FVLDTETKKWQDLPPLPV-----PRYAPATQLW-R-GRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 193 ~~yd~~~~~W~~~~~~~~-----~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
..||..+.+-...-..+. .....+++.. + ..+++.|+.++. ...+..|++
T Consensus 191 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~ 247 (416)
T 2pm9_A 191 SIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDL 247 (416)
T ss_dssp EEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEET
T ss_pred EEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeC
Confidence 789988765433222221 1112222322 2 357777765431 124666663
No 105
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.87 E-value=3.4 Score=36.20 Aligned_cols=71 Identities=7% Similarity=0.035 Sum_probs=40.3
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe---CCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
+++.++.|+.+ ..+.+||..+++.+.+..+... ...-.+++.. ++.+++.|+.+ ..+..||.
T Consensus 20 ~g~~las~s~D------~~v~iw~~~~~~~~~~~~l~gH-~~~V~~v~~s~~~~g~~l~s~s~D--------~~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSD------KTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCSYD--------GKVMIWKE 84 (297)
T ss_dssp TSSEEEEEETT------SCEEEEEBCSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------TEEEEEEB
T ss_pred CCCEEEEEeCC------CEEEEEecCCCCcEEEEEEccc-cCCeEEEEecCCCcCCEEEEEcCC--------CEEEEEEc
Confidence 45667777764 2477888876554443333321 1112233332 25677777754 45678888
Q ss_pred CCCceEECC
Q 016328 198 ETKKWQDLP 206 (391)
Q Consensus 198 ~~~~W~~~~ 206 (391)
.+.+|..+.
T Consensus 85 ~~~~~~~~~ 93 (297)
T 2pm7_B 85 ENGRWSQIA 93 (297)
T ss_dssp SSSCBCCCE
T ss_pred CCCceEEEE
Confidence 887776543
No 106
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.85 E-value=5.7 Score=39.21 Aligned_cols=76 Identities=8% Similarity=-0.001 Sum_probs=41.9
Q ss_pred ECCE----EEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeE
Q 016328 120 IKNL----LYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTF 193 (391)
Q Consensus 120 ~~~~----vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 193 (391)
.+++ ||+... ...+..+|..+.+ |+.-..-+........+-++.++.||+-.+..... ....+.
T Consensus 116 ~~g~~~~rV~v~t~-------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g---~~g~v~ 185 (599)
T 1w6s_A 116 GDGKTPALILKTQL-------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELG---VRGYLT 185 (599)
T ss_dssp CCSSSCCEEEEECT-------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGT---CCCEEE
T ss_pred cCCcceeEEEEEcC-------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccC---CCCeEE
Confidence 4666 887542 2358899988775 88632111000011223345788888743211111 135789
Q ss_pred EEeCCCCc--eEEC
Q 016328 194 VLDTETKK--WQDL 205 (391)
Q Consensus 194 ~yd~~~~~--W~~~ 205 (391)
.||.++.+ |+.-
T Consensus 186 A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 186 AYDVKTGEQVWRAY 199 (599)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEEc
Confidence 99998765 8754
No 107
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.85 E-value=4.5 Score=35.33 Aligned_cols=53 Identities=13% Similarity=0.251 Sum_probs=27.3
Q ss_pred ccccccccccCceEEccCCCCCccCceEEEE--C--CEEEEEeccCCCCCCcceeEEEECCCC
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--K--NLLYVFAGYGSIDYVHSHVDIYNFTDN 148 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~--~~vyv~GG~~~~~~~~~~~~~yd~~~~ 148 (391)
..+..+|..+.+|..+..+.........+.+ + +.+++.|+.+ ..+.+||+.+.
T Consensus 77 ~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~ 133 (297)
T 2pm7_B 77 GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKEN 133 (297)
T ss_dssp TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSS
T ss_pred CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCC
Confidence 3566677766666544332222222222333 1 4566677654 34777887765
No 108
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.83 E-value=5.8 Score=38.86 Aligned_cols=80 Identities=8% Similarity=0.041 Sum_probs=45.7
Q ss_pred eEEEECCEEEEEeccCCCCCCcceeEEEECCCC--CeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeE
Q 016328 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDN--TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTF 193 (391)
Q Consensus 116 ~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 193 (391)
+.++.+++||+... ...+..+|..+. .|+.-..-+........+-++.++.||+-.+..... ....++
T Consensus 110 ~~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~---~~g~v~ 179 (571)
T 2ad6_A 110 GLAYGAGQIVKKQA-------NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG---VRGAVN 179 (571)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT---CCCEEE
T ss_pred ccEEECCEEEEEeC-------CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccC---CCCEEE
Confidence 34567889998743 235899999877 487632111000011223345689888754321111 135789
Q ss_pred EEeCCCCc--eEEC
Q 016328 194 VLDTETKK--WQDL 205 (391)
Q Consensus 194 ~yd~~~~~--W~~~ 205 (391)
.||+++.+ |+.-
T Consensus 180 a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 180 AFDLKTGELKWRAF 193 (571)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEEc
Confidence 99998754 8653
No 109
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.81 E-value=1.2 Score=45.18 Aligned_cols=93 Identities=5% Similarity=0.048 Sum_probs=46.0
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++..+++|+.+ ..+.+||..+.+....-.... ..-.+++. -++..++.|+.+ ..+..||..+
T Consensus 66 ~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~d--------g~i~vw~~~~ 128 (814)
T 3mkq_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHP---DYIRSIAVHPTKPYVLSGSDD--------LTVKLWNWEN 128 (814)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEECCS---SCEEEEEECSSSSEEEEEETT--------SEEEEEEGGG
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEecCC---CCEEEEEEeCCCCEEEEEcCC--------CEEEEEECCC
Confidence 45666677653 358899998876544211111 11223333 245555666542 4577888876
Q ss_pred CceEECCCCC-CCCCCceEEEE--CCEEEEEccCC
Q 016328 200 KKWQDLPPLP-VPRYAPATQLW--RGRLHVMGGSG 231 (391)
Q Consensus 200 ~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~ 231 (391)
+ |.....+. ....-.+++.. ++.+++.|+.+
T Consensus 129 ~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 129 N-WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp T-SEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred C-ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 5 22222111 11111222333 45677777654
No 110
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.78 E-value=5 Score=35.63 Aligned_cols=65 Identities=9% Similarity=-0.051 Sum_probs=35.6
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeC-CCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
++.+++.|+.+ ..+.+||..+.+-... ..+... ...-.+++. -++..++.|+.+ ..+..||..
T Consensus 127 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~ 191 (366)
T 3k26_A 127 DPNLLLSVSKD------HALRLWNIQTDTLVAIFGGVEGH-RDEVLSADYDLLGEKIMSCGMD--------HSLKLWRIN 191 (366)
T ss_dssp CTTEEEEEETT------SCEEEEETTTTEEEEEECSTTSC-SSCEEEEEECTTSSEEEEEETT--------SCEEEEESC
T ss_pred CCCEEEEEeCC------CeEEEEEeecCeEEEEecccccc-cCceeEEEECCCCCEEEEecCC--------CCEEEEECC
Confidence 45677777764 3488899987754432 111211 112223333 245566677653 346778877
Q ss_pred CC
Q 016328 199 TK 200 (391)
Q Consensus 199 ~~ 200 (391)
+.
T Consensus 192 ~~ 193 (366)
T 3k26_A 192 SK 193 (366)
T ss_dssp SH
T ss_pred CC
Confidence 54
No 111
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.77 E-value=3.8 Score=37.11 Aligned_cols=28 Identities=11% Similarity=-0.001 Sum_probs=17.0
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN 148 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~ 148 (391)
++++++.|+.+........++.|+..+.
T Consensus 53 DG~~las~s~d~~~~wd~~v~~~~~~~~ 80 (357)
T 4g56_B 53 DGALLLAASSLSSRTWGGSIWVFKDPEG 80 (357)
T ss_dssp SSCEEEEEECSSSSSCCEEEEEESSCC-
T ss_pred CCCEEEEEcCCCCccccCeEEEEECCCC
Confidence 6788888776543222345778876554
No 112
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.74 E-value=1.8 Score=38.13 Aligned_cols=99 Identities=14% Similarity=0.135 Sum_probs=47.4
Q ss_pred ccccccccccCceEEccCCCCC----ccCceEEEE--CCEEEEEecc---CCCCC--CcceeEEEECCCCCeeeCCCCCC
Q 016328 90 ATFQDLPAPELKWEKMKAAPVP----RLDGAAIQI--KNLLYVFAGY---GSIDY--VHSHVDIYNFTDNTWGGRFDMPR 158 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~----r~~~~~~~~--~~~vyv~GG~---~~~~~--~~~~~~~yd~~~~~W~~~~~~p~ 158 (391)
..+..+|..+.+-...-..+.+ ..-..++.. ++.+|+.... ..... ....+.+||+.+.+....-..+.
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~ 135 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR 135 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS
T ss_pred CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC
Confidence 3577788776654321111110 012233332 3477776421 10110 12569999998876543222222
Q ss_pred CCCcceEEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceE
Q 016328 159 EMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQ 203 (391)
Q Consensus 159 ~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~ 203 (391)
. ...++. .+..||+.. ..+..||+.+.+-.
T Consensus 136 --~--~~~~~~s~dg~~l~~~~-----------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 136 --Q--ITMLAWARDGSKLYGLG-----------RDLHVMDPEAGTLV 167 (337)
T ss_dssp --S--CCCEEECTTSSCEEEES-----------SSEEEEETTTTEEE
T ss_pred --C--cceeEECCCCCEEEEeC-----------CeEEEEECCCCcEe
Confidence 1 112223 234576661 34788998877543
No 113
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.60 E-value=1.7 Score=42.39 Aligned_cols=145 Identities=6% Similarity=-0.075 Sum_probs=68.9
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC-ccccccccccccccccc--ccCceEEccC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPA--PELKWEKMKA 107 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~--~~~~W~~~~~ 107 (391)
++.+|+.+..++ .+..||..+++ ..++.... .+++...-.+ +...... ...+..||. .+.+ .+..
T Consensus 148 ~~~~~vs~~~d~-----~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~-d~~V~v~D~~~~t~~--~~~~ 217 (543)
T 1nir_A 148 PNLFSVTLRDAG-----QIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGR-DARIDMIDLWAKEPT--KVAE 217 (543)
T ss_dssp GGEEEEEEGGGT-----EEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEET-TSEEEEEETTSSSCE--EEEE
T ss_pred CCEEEEEEcCCC-----eEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECC-CCeEEEEECcCCCCc--EEEE
Confidence 678888876443 67889999887 44442111 2333232222 1111111 146778887 4433 2333
Q ss_pred CCCCccCceEEEE-----CC-EEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCC---------CCCCcceEEEEEe-C
Q 016328 108 APVPRLDGAAIQI-----KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP---------REMAHSHLGMVTD-G 171 (391)
Q Consensus 108 ~p~~r~~~~~~~~-----~~-~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p---------~~~~r~~~~~~~~-~ 171 (391)
++....-..++.- ++ .+|+..-. ...+.++|..+.+-...-+.+ .+.+|....+... +
T Consensus 218 i~~g~~p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~ 291 (543)
T 1nir_A 218 IKIGIEARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 291 (543)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred EecCCCcceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC
Confidence 3322222233332 34 56665422 245778888776533211110 0112322222222 4
Q ss_pred CEEEEEeCccCCCCCCCcceeEEEeCCCCc
Q 016328 172 RYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (391)
Q Consensus 172 ~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (391)
..+|+.... ...++.+|..+.+
T Consensus 292 ~~~~vs~~~--------~g~i~vvd~~~~~ 313 (543)
T 1nir_A 292 PEFIVNVKE--------TGKVLLVNYKDID 313 (543)
T ss_dssp SEEEEEETT--------TTEEEEEECTTSS
T ss_pred CEEEEEECC--------CCeEEEEEecCCC
Confidence 566655421 4678888887643
No 114
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.56 E-value=1.3 Score=39.32 Aligned_cols=104 Identities=9% Similarity=0.015 Sum_probs=52.7
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe---CCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
+++.++.|+.+ ..+.+||+.+++...+..+... ...-.+++.. ++.+++.|+.+ ..+..||+
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~~~~~~~l~s~s~D--------~~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMYGNILASCSYD--------RKVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEEEECC-SSCEEEEEECCGGGSSCEEEEETT--------SCEEEECC
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEEEcCC-CccEEEEEeCCCCCCCEEEEEECC--------CEEEEEEC
Confidence 45667777754 3477888876654333222221 1112233332 25677777754 34677888
Q ss_pred CCCceEECCCCCC-CCCCceEEEE-C--CEEEEEccCCCCccCCCccceEe
Q 016328 198 ETKKWQDLPPLPV-PRYAPATQLW-R--GRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 198 ~~~~W~~~~~~~~-~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
.+.+|+.+..+.. ...-.+++.. + +.+++.|+.++ .+..|++
T Consensus 89 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~ 134 (316)
T 3bg1_A 89 ENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTY 134 (316)
T ss_dssp SSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEE
T ss_pred CCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEec
Confidence 8877654432221 1111222222 2 45677776543 3555553
No 115
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=92.55 E-value=2.1 Score=39.73 Aligned_cols=64 Identities=9% Similarity=0.018 Sum_probs=34.9
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++.+++.|+.+. .+.+||+.+.+-. ..+... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 161 ~~~~l~sgs~D~------~i~iwd~~~~~~~--~~~~~h-~~~V~~v~~~p~~~~l~s~s~D--------~~i~~wd~~~ 223 (410)
T 1vyh_C 161 SGKLLASCSADM------TIKLWDFQGFECI--RTMHGH-DHNVSSVSIMPNGDHIVSASRD--------KTIKMWEVQT 223 (410)
T ss_dssp TSSEEEEEETTS------CCCEEETTSSCEE--ECCCCC-SSCEEEEEECSSSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCcee--EEEcCC-CCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCC
Confidence 456777777653 3667887654432 223221 1112233332 55666777653 4577888877
Q ss_pred Cc
Q 016328 200 KK 201 (391)
Q Consensus 200 ~~ 201 (391)
..
T Consensus 224 ~~ 225 (410)
T 1vyh_C 224 GY 225 (410)
T ss_dssp CC
T ss_pred Cc
Confidence 65
No 116
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.43 E-value=3.3 Score=36.93 Aligned_cols=104 Identities=11% Similarity=0.133 Sum_probs=47.7
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCC-----CeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEE
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN-----TWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFV 194 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~-----~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 194 (391)
++.+++.|+.+. .+.+||.... .++.+..+... ...-.+++. .++++++.|+.++ .+..
T Consensus 69 ~~~~las~s~D~------~v~iw~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~sp~g~~las~s~D~--------~v~i 133 (330)
T 2hes_X 69 HTSLLAAGSFDS------TVSIWAKEESADRTFEMDLLAIIEGH-ENEVKGVAWSNDGYYLATCSRDK--------SVWI 133 (330)
T ss_dssp TSSEEEEEETTS------CEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETTS--------CEEE
T ss_pred CCCEEEEEeCCC------cEEEEEcccCcCccccceeEEEEcCC-CCcEEEEEECCCCCEEEEEeCCC--------EEEE
Confidence 456777777642 3677776432 23322222210 111122333 2567777777543 4567
Q ss_pred EeCCC--CceEECCCCCCCCCCceEEE--ECCEEEEEccCCCCccCCCccceEe
Q 016328 195 LDTET--KKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 195 yd~~~--~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
||... ..++.+..+......-..+. -++.+++.|+.++ .+..|+.
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~-----~i~iW~~ 182 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD-----TVRIWKD 182 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEC
Confidence 77732 34444332221111111222 2566777777643 4666763
No 117
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=92.40 E-value=6.7 Score=36.21 Aligned_cols=210 Identities=18% Similarity=0.173 Sum_probs=112.9
Q ss_pred CceEE--ccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC-----CCCC--CCCcceEEEEEe
Q 016328 100 LKWEK--MKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF-----DMPR--EMAHSHLGMVTD 170 (391)
Q Consensus 100 ~~W~~--~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-----~~p~--~~~r~~~~~~~~ 170 (391)
+.|++ |+..|..-.-|+.+.+++.=|++|=.++.-....--..|-+ +.|..-. ..|. ...-...++-.+
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs--~~~~sp~~~vrr~i~sey~~~AsEPCvkyY 347 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFP--DAFNSPSNYVRRQIPSEYEPDASEPCIKYY 347 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEET--TTTTCTTCCEEEECCGGGCTTEEEEEEEEE
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEec--ccccCCcceeeeechhhhccccccchhhhh
Confidence 45654 45566555679999999888888754433222111122222 2232211 0111 112344677789
Q ss_pred CCEEEEEe-CccCCCCCCCcceeEEEeCCCCceEECC-CCCCCCCCceEEEECCEEEEEccCCC----------CccC--
Q 016328 171 GRYIYVVT-GQYGPQCRGPTAHTFVLDTETKKWQDLP-PLPVPRYAPATQLWRGRLHVMGGSGE----------NRYT-- 236 (391)
Q Consensus 171 ~~~iyv~G-G~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~~~~~iyv~GG~~~----------~~~~-- 236 (391)
++.||+.- |..+.. .-+.+.+-+.....|+.+. +-..-....-.+.+++.||+||-... ++|.
T Consensus 348 dgvLyLtTRgt~~~~---~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY~a~ 424 (670)
T 3ju4_A 348 DGVLYLITRGTRGDR---LGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRYKAS 424 (670)
T ss_dssp TTEEEEEEEESCTTS---CCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCSSCB
T ss_pred CCEEEEEecCcCCCC---CcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCccccccc
Confidence 99999974 333322 2577888888899999875 22233334456789999999985421 1221
Q ss_pred -CCccceEeeeecCCcccCCceeecC------CCCCCcceeE-EEECCEE-EEEeCCCCCCCcCCCCCccccCcCCceec
Q 016328 237 -PEVDHWSLAVKDGKPLEKEWRTEIP------IPRGGPHRAC-VVVDDRL-LVIGGQEGDFMAKPGSPIFKCSRRNEVVY 307 (391)
Q Consensus 237 -~~~~~~~~~~~~~d~~~~~W~~~~~------~p~~~~~~~~-~~~~~~i-~v~GG~~~~~~~~~~~~~~~~~~~~~~~~ 307 (391)
|.+-.-...+.++..+.-+|..+.. ......+.+. |+.++-| |+|||++.-..-.-.+...+.....+..-
T Consensus 425 yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np~s~gdN~~k~~~~~~Ghp 504 (670)
T 3ju4_A 425 YPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNPWTYGDNSAKDPFKSDGHP 504 (670)
T ss_dssp CCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCCCTTTTTTTCCTTSTTCCC
T ss_pred CCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCccccccccccCccccCCCC
Confidence 1111112223444455667876532 2223333444 4556765 56899864433222233333344444556
Q ss_pred CcEEEEc
Q 016328 308 DDVYMLD 314 (391)
Q Consensus 308 ~~v~~~d 314 (391)
.|+|+|.
T Consensus 505 ~dlY~~r 511 (670)
T 3ju4_A 505 SDLYCYK 511 (670)
T ss_dssp CEEEEEE
T ss_pred cceEEEE
Confidence 7888884
No 118
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.38 E-value=6.1 Score=35.68 Aligned_cols=65 Identities=2% Similarity=-0.067 Sum_probs=35.7
Q ss_pred ceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC
Q 016328 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (391)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (391)
..++++|+.+.+-+.+..-+. ...+....- +++.+++....... .....++.+|+.+...+.+..
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~---~~~~~~~sp~dg~~l~~~~~~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ---WLGHPIYRPYDDSTVAFCHEGPHD--LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS---CEEEEEEETTEEEEEEEEECSCTT--TSSCSEEEEETTSCCCEESCC
T ss_pred ceEEEEECCCCceEEeecCCc---cccccEECCCCCCEEEEEEecCCC--CCcceEEEEeCCCCceEEeee
Confidence 569999999887665532221 222222223 45444443322111 114689999998877776654
No 119
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.24 E-value=5.5 Score=34.82 Aligned_cols=65 Identities=11% Similarity=0.125 Sum_probs=33.9
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCC-------CeeeCCCCCCCCCcceEEEEEe-C--CEEEEEeCccCCCCCCCcce
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDN-------TWGGRFDMPREMAHSHLGMVTD-G--RYIYVVTGQYGPQCRGPTAH 191 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~-------~W~~~~~~p~~~~r~~~~~~~~-~--~~iyv~GG~~~~~~~~~~~~ 191 (391)
+.+++.|+.++ .+.+||..+. .|+.+..+... ...-.+++.. + +.+++.|+.+ ..
T Consensus 71 ~~~l~s~~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d--------g~ 135 (351)
T 3f3f_A 71 GRIIASASYDK------TVKLWEEDPDQEECSGRRWNKLCTLNDS-KGSLYSVKFAPAHLGLKLACLGND--------GI 135 (351)
T ss_dssp CSEEEEEETTS------CEEEEEECTTSCTTSSCSEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETT--------CE
T ss_pred CCEEEEEcCCC------eEEEEecCCCcccccccCcceeeeeccc-CCceeEEEEcCCCCCcEEEEecCC--------Cc
Confidence 56777777642 3777777654 33443333221 1112233333 2 5566666643 45
Q ss_pred eEEEeCCCCc
Q 016328 192 TFVLDTETKK 201 (391)
Q Consensus 192 ~~~yd~~~~~ 201 (391)
+..||..+.+
T Consensus 136 v~iwd~~~~~ 145 (351)
T 3f3f_A 136 LRLYDALEPS 145 (351)
T ss_dssp EEEEECSSTT
T ss_pred EEEecCCChH
Confidence 7788876543
No 120
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.03 E-value=3.9 Score=35.74 Aligned_cols=88 Identities=14% Similarity=0.083 Sum_probs=48.1
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
.++++++|..+ ..+.++|.++.+ |+.-..-. ...+.....-+++|++.+ ...+..||+.
T Consensus 4 ~~~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~~---~~~~~~~~~pdG~ilvs~----------~~~V~~~d~~ 64 (276)
T 3no2_A 4 PQHLLVGGSGW------NKIAIINKDTKEIVWEYPLEKG---WECNSVAATKAGEILFSY----------SKGAKMITRD 64 (276)
T ss_dssp CCEEEEECTTC------SEEEEEETTTTEEEEEEECCTT---CCCCEEEECTTSCEEEEC----------BSEEEEECTT
T ss_pred CCcEEEeeCCC------CEEEEEECCCCeEEEEeCCCcc---CCCcCeEECCCCCEEEeC----------CCCEEEECCC
Confidence 35777776543 458889987764 77643211 123344455688888842 2458889983
Q ss_pred CC-ceEECCCCCCCCCCceEE-EECCEEEEEcc
Q 016328 199 TK-KWQDLPPLPVPRYAPATQ-LWRGRLHVMGG 229 (391)
Q Consensus 199 ~~-~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG 229 (391)
.+ .|+.-.+ .....+++. ..++++++...
T Consensus 65 G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 65 GRELWNIAAP--AGCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp SCEEEEEECC--TTCEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCC--CCccccccEECCCCCEEEEec
Confidence 22 3765432 111122333 34666666643
No 121
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.02 E-value=1.1 Score=40.23 Aligned_cols=61 Identities=8% Similarity=-0.008 Sum_probs=35.6
Q ss_pred eeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC
Q 016328 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (391)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (391)
.++.+|..+.+++.+...... .. ...++. -+++||+.+.... ...+..||+.+.+++.+..
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~-~~-p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAAT-QN-PTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEEC-SC-CCCEEECTTCEEEEEEEETT------EEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCCCeEEEeeeeecc-CC-cceEEEccCCeEEEEEecCC------CceEEEEEecCCcEEEeee
Confidence 477788888887764322210 11 112333 3677887753211 3678899998888776654
No 122
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=91.98 E-value=11 Score=37.72 Aligned_cols=98 Identities=18% Similarity=0.284 Sum_probs=59.0
Q ss_pred eEEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCC------CcceEEEEEeCCEEEEEeCccCCCCCC
Q 016328 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREM------AHSHLGMVTDGRYIYVVTGQYGPQCRG 187 (391)
Q Consensus 116 ~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~------~r~~~~~~~~~~~iyv~GG~~~~~~~~ 187 (391)
+-++.++.||+.... ..++.+|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 72 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------- 136 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------- 136 (677)
T ss_dssp CCEEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------
T ss_pred CCEEECCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------
Confidence 346679999998652 458999988764 88754332100 0112345668999998632
Q ss_pred CcceeEEEeCCCCc--eEECCC-C-CC-CCCCceEEEECCEEEEEcc
Q 016328 188 PTAHTFVLDTETKK--WQDLPP-L-PV-PRYAPATQLWRGRLHVMGG 229 (391)
Q Consensus 188 ~~~~~~~yd~~~~~--W~~~~~-~-~~-~r~~~~~~~~~~~iyv~GG 229 (391)
...++.+|.++.+ |+.-.. - +. .....+-++.++++|+..+
T Consensus 137 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~ 182 (677)
T 1kb0_A 137 -DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNG 182 (677)
T ss_dssp -TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCB
T ss_pred -CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEec
Confidence 3568899998765 876432 1 11 1122234467888877543
No 123
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=91.97 E-value=2 Score=39.55 Aligned_cols=96 Identities=9% Similarity=-0.056 Sum_probs=48.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeee-----CCCCCCCCCcceEEEEEe-CC-EEEEEeCccCCCCCCCcceeE
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG-----RFDMPREMAHSHLGMVTD-GR-YIYVVTGQYGPQCRGPTAHTF 193 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~-----~~~~p~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~ 193 (391)
++.+++.|+.+ ..+.+||..++.... +..+... ...-.+++.. ++ .+++.|+.+ ..+.
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~d--------g~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGH-TKRVGIVAWHPTAQNVLLSAGCD--------NVIL 157 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECC-SSCEEEEEECSSBTTEEEEEETT--------SCEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCC-CCeEEEEEECcCCCCEEEEEcCC--------CEEE
Confidence 56777777754 348889988875422 1111111 1112233333 32 577777654 3477
Q ss_pred EEeCCCCceEECCC-CCCCCCCceEEEE-CCEEEEEccCC
Q 016328 194 VLDTETKKWQDLPP-LPVPRYAPATQLW-RGRLHVMGGSG 231 (391)
Q Consensus 194 ~yd~~~~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~GG~~ 231 (391)
.||..+.+....-. ......-.+++.. ++++++.|+.+
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence 89988775432211 1111112222222 56677777654
No 124
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=91.92 E-value=3.2 Score=42.24 Aligned_cols=160 Identities=7% Similarity=0.029 Sum_probs=80.9
Q ss_pred cccccccccCceEEccCCCCCccC-ceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCC-CC-CcceEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLD-GAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR-EM-AHSHLG 166 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~~-~r~~~~ 166 (391)
-+..||+.+.+++.......+... .++... ++.|+|... .-+.+||+.+++|+.....+. +. ...-.+
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 499 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRS 499 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEE
T ss_pred CEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEE
Confidence 466778877777766432111111 222222 467777532 238899999998877543221 00 111122
Q ss_pred EEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC---CCCCCCCceEEE-ECCEEEEEccCCCCccCCCccc
Q 016328 167 MVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP---LPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDH 241 (391)
Q Consensus 167 ~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 241 (391)
++. -++.||+..- ..-+++||+.+++++.... ++... -.+++. .++.|++... .+ .
T Consensus 500 i~~d~~g~lWigt~---------~~Gl~~~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWi~T~-~G------l-- 560 (781)
T 3v9f_A 500 IAQDSEGRFWIGTF---------GGGVGIYTPDMQLVRKFNQYEGFCSNT-INQIYRSSKGQMWLATG-EG------L-- 560 (781)
T ss_dssp EEECTTCCEEEEES---------SSCEEEECTTCCEEEEECTTTTCSCSC-EEEEEECTTSCEEEEET-TE------E--
T ss_pred EEEcCCCCEEEEEc---------CCCEEEEeCCCCeEEEccCCCCCCCCe-eEEEEECCCCCEEEEEC-CC------c--
Confidence 322 3577887531 1347889999998887653 22111 112222 2566776532 11 0
Q ss_pred eEeeeecCCcccCCceeec---CCCCCCcceeEEE-ECCEEEEEe
Q 016328 242 WSLAVKDGKPLEKEWRTEI---PIPRGGPHRACVV-VDDRLLVIG 282 (391)
Q Consensus 242 ~~~~~~~~d~~~~~W~~~~---~~p~~~~~~~~~~-~~~~i~v~G 282 (391)
++.||+++++++... .+|..... +++. -++.|++.+
T Consensus 561 ----v~~~d~~~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 561 ----VCFPSARNFDYQVFQRKEGLPNTHIR-AISEDKNGNIWAST 600 (781)
T ss_dssp ----EEESCTTTCCCEEECGGGTCSCCCCC-EEEECSSSCEEEEC
T ss_pred ----eEEECCCCCcEEEccccCCCCCceEE-EEEECCCCCEEEEc
Confidence 133456666665542 24433322 2222 256777764
No 125
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.89 E-value=7.3 Score=35.54 Aligned_cols=23 Identities=4% Similarity=-0.260 Sum_probs=16.5
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS 60 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~ 60 (391)
++.+++.|+.++ .+..||..+.+
T Consensus 108 ~~~~l~~~~~dg-----~i~iwd~~~~~ 130 (420)
T 3vl1_A 108 QMRRFILGTTEG-----DIKVLDSNFNL 130 (420)
T ss_dssp SSCEEEEEETTS-----CEEEECTTSCE
T ss_pred CCCEEEEEECCC-----CEEEEeCCCcc
Confidence 566677776555 57888888777
No 126
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.80 E-value=0.81 Score=41.01 Aligned_cols=93 Identities=10% Similarity=0.002 Sum_probs=47.3
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
+.+++.|+.+ ..+.+||+.+.+-... +... ...-.+++.. ++.+++.|+.+ ..+..||..+
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~--~~~~-~~~i~~~~~~~~~~~~l~s~~~d--------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKH--YVGH-GNAINELKFHPRDPNLLLSVSKD--------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEE--EESC-CSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTT
T ss_pred CCEEEEecCC------CEEEEEEchhceEeee--ecCC-CCcEEEEEECCCCCCEEEEEeCC--------CeEEEEEeec
Confidence 4677777764 3588899876643221 1110 1112233333 56777777753 3577889887
Q ss_pred CceEEC-CCCCCCCC-CceEEE-ECCEEEEEccCC
Q 016328 200 KKWQDL-PPLPVPRY-APATQL-WRGRLHVMGGSG 231 (391)
Q Consensus 200 ~~W~~~-~~~~~~r~-~~~~~~-~~~~iyv~GG~~ 231 (391)
.+-... ..+..... -.+++. -+++.++.|+.+
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCC
Confidence 653322 11121111 122222 245566777654
No 127
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.77 E-value=2.8 Score=45.02 Aligned_cols=129 Identities=10% Similarity=0.061 Sum_probs=60.5
Q ss_pred cccccccccCceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD 170 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~ 170 (391)
.+..+|..+.+...+.... ..-.++....+..++.|+.+ ..+.+||..+.+-...-..+. ..........
T Consensus 1026 ~i~vwd~~~~~~~~~~~~~--~~v~~~~~~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~--~~v~~~~~s~ 1095 (1249)
T 3sfz_A 1026 VIQVWNWQTGDYVFLQAHQ--ETVKDFRLLQDSRLLSWSFD------GTVKVWNVITGRIERDFTCHQ--GTVLSCAISS 1095 (1249)
T ss_dssp BEEEEETTTTEEECCBCCS--SCEEEEEECSSSEEEEEESS------SEEEEEETTTTCCCEEEECCS--SCCCCEEECS
T ss_pred EEEEEECCCCceEEEecCC--CcEEEEEEcCCCcEEEEECC------CcEEEEECCCCceeEEEcccC--CcEEEEEECC
Confidence 5666776666544322111 11122233333345555543 358889988765332111111 1111222234
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEE--EECCEEEEEccCCCCccCCCccceEe
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQ--LWRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
++++++.|+.++ .+..||..+.+ .+..+......-.++ .-++++++.|+.++ .+..|++
T Consensus 1096 d~~~l~s~s~d~--------~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg-----~i~vwd~ 1156 (1249)
T 3sfz_A 1096 DATKFSSTSADK--------TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNG-----EIRIWNV 1156 (1249)
T ss_dssp SSSSCEEECCSS--------CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTS-----CCCEEES
T ss_pred CCCEEEEEcCCC--------cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCC-----EEEEEEC
Confidence 566777777544 34567776543 222222111111222 23677788877543 3666764
No 128
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.67 E-value=4.1 Score=40.28 Aligned_cols=238 Identities=10% Similarity=-0.052 Sum_probs=108.0
Q ss_pred ccccccccc--c-CceEEccCCCCC--c-cCceEE-EECCEEEEEeccCC----CCCCcceeEEEECCC------CCeee
Q 016328 90 ATFQDLPAP--E-LKWEKMKAAPVP--R-LDGAAI-QIKNLLYVFAGYGS----IDYVHSHVDIYNFTD------NTWGG 152 (391)
Q Consensus 90 ~~~~~~d~~--~-~~W~~~~~~p~~--r-~~~~~~-~~~~~vyv~GG~~~----~~~~~~~~~~yd~~~------~~W~~ 152 (391)
..++.++.. . ..-.++...+.. . .....+ .-+++.+++...+. .......++++|..+ .+-+.
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 356677765 3 455555544311 1 111222 22554444443321 112235699999988 66665
Q ss_pred CC-CCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCC-CCceEECCCCCCC--CCCceEE-EECCEEEEE
Q 016328 153 RF-DMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE-TKKWQDLPPLPVP--RYAPATQ-LWRGRLHVM 227 (391)
Q Consensus 153 ~~-~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~-~~~W~~~~~~~~~--r~~~~~~-~~~~~iyv~ 227 (391)
+. .-+. ........-+++..++...+.........+++.+|.. +.++.....+... ......+ .-++++|+.
T Consensus 182 l~~~~~~---~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 182 LSDDAHR---FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp SSCSCSS---EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEE
T ss_pred EEecCCC---cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEE
Confidence 54 2111 1111112235544444433322111114689999998 5633222222111 1111222 236777766
Q ss_pred ccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCC------c-ceeEEEE-CCEEEEEeCCCCCCCcCCCCCcccc
Q 016328 228 GGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG------P-HRACVVV-DDRLLVIGGQEGDFMAKPGSPIFKC 299 (391)
Q Consensus 228 GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~------~-~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~ 299 (391)
+..++ .... +.+|+.+.+++.+.+..... . ....+.. ++++++.+.. +.
T Consensus 259 ~~~~~-----~~~l-----~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~------------ 315 (662)
T 3azo_A 259 TDRTG-----WWNL-----HRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GA------------ 315 (662)
T ss_dssp ECTTS-----SCEE-----EEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SS------------
T ss_pred ECCCC-----CeEE-----EEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Cc------------
Confidence 54432 1122 23345566776654322111 0 0123333 6777776654 22
Q ss_pred CcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCceeeE-EEECCEEEEEccccCCCCcccceeEecceEEEecCccc
Q 016328 300 SRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAW-VLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 300 ~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~-~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~ 374 (391)
..+|.+| .+.+.+.+.. + ... ...+ ..-++.+++..+.... ..++|.+|+++.+
T Consensus 316 --------~~l~~~d~~~~~~~~l~~-~--~~~-~~~~~s~~~~~~~~~~~~~~~---------~~~i~~~d~~~g~ 371 (662)
T 3azo_A 316 --------AVLGILDPESGELVDAAG-P--WTE-WAATLTVSGTRAVGVAASPRT---------AYEVVELDTVTGR 371 (662)
T ss_dssp --------CEEEEEETTTTEEEECCS-S--CCE-EEEEEEEETTEEEEEEEETTE---------EEEEEEEETTTCC
T ss_pred --------cEEEEEECCCCcEEEecC-C--CCe-EEEEEecCCCEEEEEEcCCCC---------CCEEEEEECCCCc
Confidence 2488888 6666666632 1 111 1222 3345666666554321 1368888865443
No 129
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.27 E-value=9.4 Score=35.56 Aligned_cols=65 Identities=14% Similarity=0.199 Sum_probs=36.3
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCc
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (391)
+++++.|+.+ ..+.+||+.+.+....-.... ...-.+++..++.+++.|+.+ ..+..||..+.+
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h--~~~v~~~~~sd~~~l~s~~~d--------~~v~vwd~~~~~ 273 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFGH--KHFVSSICCGKDYLLLSAGGD--------DKIFAWDWKTGK 273 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCCC--SSCEEEEEECSTTEEEEEESS--------SEEEEEETTTCC
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecCC--CCceEEEEECCCCEEEEEeCC--------CeEEEEECCCCc
Confidence 7778888764 348888887765432101011 111122222267677777643 467788888765
Q ss_pred e
Q 016328 202 W 202 (391)
Q Consensus 202 W 202 (391)
.
T Consensus 274 ~ 274 (450)
T 2vdu_B 274 N 274 (450)
T ss_dssp E
T ss_pred E
Confidence 3
No 130
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.25 E-value=5.1 Score=37.00 Aligned_cols=91 Identities=9% Similarity=0.063 Sum_probs=43.5
Q ss_pred eEeeecCCCCe-eecCC-CCCCCC-ceeeEeecC-cccccccccccccccccccCceEEccCCCCCccCceEEEECCEEE
Q 016328 50 IASNWSPYHNS-IILPN-NGPQKG-ENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLY 125 (391)
Q Consensus 50 ~~~~~d~~~~~-~~lp~-~~~r~~-~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~vy 125 (391)
.+..||..+++ ..+-. ..+... ..++....+ +...+. ....+..+|..+.+- +..+........+...++.++
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs-~Dg~v~iWd~~~~~~--~~~~~~h~~~v~~~s~~~~~l 202 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-SSAEVQLWDVQQQKR--LRNMTSHSARVGSLSWNSYIL 202 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTEE--EEEECCCSSCEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE-CCCeEEEEEcCCCcE--EEEEeCCCCceEEEeeCCCEE
Confidence 68889999887 33222 111111 122222112 222221 233566777665542 222222222333445567777
Q ss_pred EEeccCCCCCCcceeEEEECCCCC
Q 016328 126 VFAGYGSIDYVHSHVDIYNFTDNT 149 (391)
Q Consensus 126 v~GG~~~~~~~~~~~~~yd~~~~~ 149 (391)
+.|+.+ ..+..+|.....
T Consensus 203 ~sgs~d------~~i~~~d~~~~~ 220 (420)
T 4gga_A 203 SSGSRS------GHIHHHDVRVAE 220 (420)
T ss_dssp EEEETT------SEEEEEETTSSS
T ss_pred EEEeCC------CceeEeeecccc
Confidence 777754 346777766543
No 131
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=91.18 E-value=3.3 Score=37.44 Aligned_cols=68 Identities=10% Similarity=-0.042 Sum_probs=35.1
Q ss_pred ECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCC-CCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR-EMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 120 ~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
..+..++.|+.+ ..+.+||+.+++-........ .....-.+++. -+++.++.|+.++ .+..||+
T Consensus 91 s~d~~l~~~s~d------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~--------~i~iwd~ 156 (344)
T 4gqb_B 91 VGERGILVASDS------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI--------CIKVWDL 156 (344)
T ss_dssp ETTTEEEEEETT------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEET
T ss_pred eCCCeEEEEECC------CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC--------eEEEEEC
Confidence 344445566543 348888988765322111100 00111123333 3667777777543 4678898
Q ss_pred CCCc
Q 016328 198 ETKK 201 (391)
Q Consensus 198 ~~~~ 201 (391)
.+.+
T Consensus 157 ~~~~ 160 (344)
T 4gqb_B 157 AQQV 160 (344)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8764
No 132
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=91.13 E-value=3 Score=37.39 Aligned_cols=98 Identities=7% Similarity=0.062 Sum_probs=48.7
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++. ++.|+.+ ..+.+||+.+.+-... +... ...-.+++. .++.+++.|+.++ .+..||..+
T Consensus 154 ~~~-l~s~s~d------~~i~~wd~~~~~~~~~--~~~h-~~~v~~~~~~~~~~~l~sg~~d~--------~v~~wd~~~ 215 (340)
T 1got_B 154 DNQ-IVTSSGD------TTCALWDIETGQQTTT--FTGH-TGDVMSLSLAPDTRLFVSGACDA--------SAKLWDVRE 215 (340)
T ss_dssp TTE-EEEEETT------SCEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTSSEEEEEETTS--------CEEEEETTT
T ss_pred CCc-EEEEECC------CcEEEEECCCCcEEEE--EcCC-CCceEEEEECCCCCEEEEEeCCC--------cEEEEECCC
Confidence 455 4555543 3488899887654332 2111 111223333 3567778887643 466788876
Q ss_pred CceEECCCCCC-CCCCceEEE-ECCEEEEEccCCCCccCCCccceE
Q 016328 200 KKWQDLPPLPV-PRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 200 ~~W~~~~~~~~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
..-... +.. ...-.+++. -++++++.|+.++ .+..|+
T Consensus 216 ~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~d~-----~v~iwd 254 (340)
T 1got_B 216 GMCRQT--FTGHESDINAICFFPNGNAFATGSDDA-----TCRLFD 254 (340)
T ss_dssp CSEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CeeEEE--EcCCcCCEEEEEEcCCCCEEEEEcCCC-----cEEEEE
Confidence 542211 111 111112222 2567777777543 355665
No 133
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=90.98 E-value=2.8 Score=36.90 Aligned_cols=101 Identities=12% Similarity=0.154 Sum_probs=49.8
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
++..++.|+.+ ..+.+||..+.+-...-.... ..........++++++.|+.+ ..+..||..+.
T Consensus 24 ~~~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~s~d--------~~i~vwd~~~~ 87 (304)
T 2ynn_A 24 TEPWVLTTLYS------GRVELWNYETQVEVRSIQVTE--TPVRAGKFIARKNWIIVGSDD--------FRIRVFNYNTG 87 (304)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGTEEEEEETT--------SEEEEEETTTC
T ss_pred CCCEEEEEcCC------CcEEEEECCCCceeEEeeccC--CcEEEEEEeCCCCEEEEECCC--------CEEEEEECCCC
Confidence 45666777654 348888987765332111111 111122223355666777653 45678888776
Q ss_pred ceEECCCCC-CCCCCceEEE-ECCEEEEEccCCCCccCCCccceEe
Q 016328 201 KWQDLPPLP-VPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 201 ~W~~~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
+-.. .+. ....-.+++. -++++++.|+.+. .+..|++
T Consensus 88 ~~~~--~~~~h~~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd~ 126 (304)
T 2ynn_A 88 EKVV--DFEAHPDYIRSIAVHPTKPYVLSGSDDL-----TVKLWNW 126 (304)
T ss_dssp CEEE--EEECCSSCEEEEEECSSSSEEEEEETTS-----CEEEEEG
T ss_pred cEEE--EEeCCCCcEEEEEEcCCCCEEEEECCCC-----eEEEEEC
Confidence 4221 111 1111122222 2456677776543 4666764
No 134
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=90.95 E-value=9 Score=34.79 Aligned_cols=101 Identities=7% Similarity=0.051 Sum_probs=48.7
Q ss_pred EEEEEeccCCCCCCcceeEEEECCCCCeeeCC--CCCCCCCcceEEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 123 LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 123 ~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
..++.|+.+ ..+.+||+.+.+-...- ..+......-.+++. .++.+++.|+.++ .+..||+.
T Consensus 171 ~~l~s~s~D------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~~ 236 (380)
T 3iz6_a 171 TRLITGSGD------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDLR 236 (380)
T ss_dssp SCEEEECTT------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEETT
T ss_pred CEEEEECCC------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEECC
Confidence 445566543 34788998887644321 122111111223333 2667888888654 45678875
Q ss_pred CCc--eEECCCCCCCCCCceEEE-ECCEEEEEccCCCCccCCCccceEe
Q 016328 199 TKK--WQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 199 ~~~--W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
... -..+.. ....-.+++. -+++.++.|+.++ .+..|++
T Consensus 237 ~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D~-----~i~lwd~ 278 (380)
T 3iz6_a 237 ITSRAVRTYHG--HEGDINSVKFFPDGQRFGTGSDDG-----TCRLFDM 278 (380)
T ss_dssp TTCCCCEEECC--CSSCCCEEEECTTSSEEEEECSSS-----CEEEEET
T ss_pred CCCcceEEECC--cCCCeEEEEEecCCCeEEEEcCCC-----eEEEEEC
Confidence 321 111111 1111122222 2566777777643 3566653
No 135
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.82 E-value=1.1 Score=41.83 Aligned_cols=103 Identities=12% Similarity=0.018 Sum_probs=55.6
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
++.+++.|+.++ .+.+||..+.+-...-.+... ...-.+++. .++.+++.|+.++ .+..||.+
T Consensus 131 ~~~~lasGs~dg------~i~lWd~~~~~~~~~~~~~gH-~~~V~~l~f~p~~~~~l~s~s~D~--------~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG------DIMLWNFGIKDKPTFIKGIGA-GGSITGLKFNPLNTNQFYASSMEG--------TTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS------CEEEECSSCCSCCEEECCCSS-SCCCCEEEECSSCTTEEEEECSSS--------CEEEEETT
T ss_pred CCCEEEEEeCCC------EEEEEECCCCCceeEEEccCC-CCCEEEEEEeCCCCCEEEEEeCCC--------EEEEeecc
Confidence 456788887653 488889887764443222211 111223444 3566777777654 46678988
Q ss_pred CCceEECCCCCC-CCCCceEE-EECCEEEEEccCCCCccCCCccceE
Q 016328 199 TKKWQDLPPLPV-PRYAPATQ-LWRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 199 ~~~W~~~~~~~~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
++....+..... .....++. .-++++++.|+.++ .+..|+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd 237 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG-----NVILLN 237 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS-----BEEEEE
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC-----cEeeec
Confidence 776554432221 11122233 34667788887543 345555
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=90.79 E-value=3.5 Score=36.35 Aligned_cols=64 Identities=8% Similarity=-0.007 Sum_probs=41.2
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
.+.+|+....+ ..+.+||+.+++....-..+. . .. .++. .+..+|+.+.. ...++.+|+.
T Consensus 9 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~--~-~~-~~~~s~dg~~l~~~~~~--------~~~i~~~d~~ 70 (331)
T 3u4y_A 9 SNFGIVVEQHL------RRISFFSTDTLEILNQITLGY--D-FV-DTAITSDCSNVVVTSDF--------CQTLVQIETQ 70 (331)
T ss_dssp CCEEEEEEGGG------TEEEEEETTTCCEEEEEECCC--C-EE-EEEECSSSCEEEEEEST--------TCEEEEEECS
T ss_pred CCEEEEEecCC------CeEEEEeCcccceeeeEEccC--C-cc-eEEEcCCCCEEEEEeCC--------CCeEEEEECC
Confidence 46788887643 469999999988866433332 1 12 3333 23468877642 3578999998
Q ss_pred CCce
Q 016328 199 TKKW 202 (391)
Q Consensus 199 ~~~W 202 (391)
+.+-
T Consensus 71 ~~~~ 74 (331)
T 3u4y_A 71 LEPP 74 (331)
T ss_dssp SSSC
T ss_pred CCce
Confidence 8774
No 137
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.69 E-value=6.4 Score=40.02 Aligned_cols=68 Identities=21% Similarity=0.170 Sum_probs=41.3
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++.|++ |.. ..-+.+||+.+++++.......+ ...-.+++.. ++.||+.. ..-+.+||+.+
T Consensus 417 ~g~lWi-gt~------~~Gl~~~~~~~~~~~~~~~~~~~-~~~v~~i~~d~~g~lwigt----------~~Gl~~~~~~~ 478 (781)
T 3v9f_A 417 EGNLWF-GTY------LGNISYYNTRLKKFQIIELEKNE-LLDVRVFYEDKNKKIWIGT----------HAGVFVIDLAS 478 (781)
T ss_dssp TSCEEE-EET------TEEEEEECSSSCEEEECCSTTTC-CCCEEEEEECTTSEEEEEE----------TTEEEEEESSS
T ss_pred CCCEEE-Eec------cCCEEEEcCCCCcEEEeccCCCC-CCeEEEEEECCCCCEEEEE----------CCceEEEeCCC
Confidence 457777 321 13488999999998876532111 1122233333 57888752 24578999999
Q ss_pred CceEECC
Q 016328 200 KKWQDLP 206 (391)
Q Consensus 200 ~~W~~~~ 206 (391)
.+|+...
T Consensus 479 ~~~~~~~ 485 (781)
T 3v9f_A 479 KKVIHHY 485 (781)
T ss_dssp SSCCEEE
T ss_pred CeEEecc
Confidence 8887654
No 138
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.61 E-value=7 Score=35.76 Aligned_cols=82 Identities=9% Similarity=0.029 Sum_probs=44.9
Q ss_pred ceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCce
Q 016328 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPA 216 (391)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~ 216 (391)
..+.+||..+.+......... ...-.+++.. ++.++++|+.+ ..+..||..+.+-... +......-.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~--~~~v~~v~~s~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~--~~~~~~~v~ 180 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDE--STYVASVKWSHDGSFLSVGLGN--------GLVDIYDVESQTKLRT--MAGHQARVG 180 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCT--TCCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCCEEEE--ECCCSSCEE
T ss_pred CeEEEeeCCCCcEeEeeecCC--CCCEEEEEECCCCCEEEEECCC--------CeEEEEECcCCeEEEE--ecCCCCceE
Confidence 358899999887766544332 1222333333 56677777653 3567889887653322 111122223
Q ss_pred EEEECCEEEEEccCC
Q 016328 217 TQLWRGRLHVMGGSG 231 (391)
Q Consensus 217 ~~~~~~~iyv~GG~~ 231 (391)
+...++.+++.|+.+
T Consensus 181 ~~~~~~~~l~~~~~d 195 (401)
T 4aez_A 181 CLSWNRHVLSSGSRS 195 (401)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEEECCCEEEEEcCC
Confidence 334466677777654
No 139
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=90.60 E-value=6.7 Score=35.42 Aligned_cols=94 Identities=10% Similarity=0.008 Sum_probs=52.1
Q ss_pred EEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 123 LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 123 ~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
.+++.|+.+ ..+.+||..+.+....-..... ...-.+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGMGP-GDAITGMKFNQFNTNQLFVSSIR--------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCCST-TCBEEEEEEETTEEEEEEEEETT--------TEEEEEETTSC
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecCCc-CCceeEEEeCCCCCCEEEEEeCC--------CEEEEEECCCC
Confidence 577777764 3488999998877664333211 1222344444 44677777653 45778999876
Q ss_pred ceEECCCCCCC-CCCceEE-EECCEEEEEccCC
Q 016328 201 KWQDLPPLPVP-RYAPATQ-LWRGRLHVMGGSG 231 (391)
Q Consensus 201 ~W~~~~~~~~~-r~~~~~~-~~~~~iyv~GG~~ 231 (391)
....+...... ....+++ .-++++++.|+.+
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 184 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST 184 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC
Confidence 66555432211 1112222 2356677777654
No 140
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=90.28 E-value=13 Score=35.71 Aligned_cols=58 Identities=9% Similarity=-0.103 Sum_probs=30.8
Q ss_pred CEEEEEeCc-cCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEE--CCEEEEEccCCCCccCCCccceE
Q 016328 172 RYIYVVTGQ-YGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 172 ~~iyv~GG~-~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
+.+++.|+. + ..+..||..+.+... ..+......-....+ ++++++.|+.++ .+..|+
T Consensus 456 ~~~l~~~~~~d--------~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg-----~i~iw~ 516 (615)
T 1pgu_A 456 QNYVAVGLEEG--------NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMG-----KILLYD 516 (615)
T ss_dssp SSEEEEEETTT--------SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CCEEEEeecCC--------CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCC-----eEEEee
Confidence 555666653 3 347789988776543 222222222222222 677788877543 355565
No 141
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.27 E-value=1.9 Score=39.22 Aligned_cols=70 Identities=13% Similarity=0.097 Sum_probs=37.7
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCC----------CCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD----------MPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGP 188 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~----------~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 188 (391)
++.+++.|+.+ ..+.+||..+.+...... .+......-.+++.. ++.+++.|+.+
T Consensus 55 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------- 121 (408)
T 4a11_B 55 EGRYMLSGGSD------GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------- 121 (408)
T ss_dssp TCCEEEEEETT------SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-------
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-------
Confidence 56777777764 248888888765433211 000011122233333 45567777643
Q ss_pred cceeEEEeCCCCceEE
Q 016328 189 TAHTFVLDTETKKWQD 204 (391)
Q Consensus 189 ~~~~~~yd~~~~~W~~ 204 (391)
..+..||..+.+-..
T Consensus 122 -~~i~iwd~~~~~~~~ 136 (408)
T 4a11_B 122 -KTLKVWDTNTLQTAD 136 (408)
T ss_dssp -SEEEEEETTTTEEEE
T ss_pred -CeEEEeeCCCCccce
Confidence 457788888765433
No 142
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=89.95 E-value=14 Score=36.72 Aligned_cols=104 Identities=14% Similarity=0.028 Sum_probs=47.1
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CC--EEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR--YIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~--~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
++..++.|+.+ ..+.++|.....=..+..........-.+++.. ++ .+++.|+.+ ..+..||.
T Consensus 483 ~~~~l~s~s~D------~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d--------~~v~vwd~ 548 (694)
T 3dm0_A 483 DNRQIVSASRD------RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD--------KTVKVWNL 548 (694)
T ss_dssp TSSCEEEEETT------SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT--------SCEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC--------CeEEEEEC
Confidence 45666677654 236777765442222211111101111233332 22 456666653 34677888
Q ss_pred CCCceEECCCCCCCCCCceEEE-ECCEEEEEccCCCCccCCCccceEe
Q 016328 198 ETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 198 ~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
.+.+-...-.-... .-.+++. -++++++.|+.++ .+..|++
T Consensus 549 ~~~~~~~~~~~h~~-~v~~v~~spdg~~l~sg~~Dg-----~i~iwd~ 590 (694)
T 3dm0_A 549 SNCKLRSTLAGHTG-YVSTVAVSPDGSLCASGGKDG-----VVLLWDL 590 (694)
T ss_dssp TTCCEEEEECCCSS-CEEEEEECTTSSEEEEEETTS-----BCEEEET
T ss_pred CCCcEEEEEcCCCC-CEEEEEEeCCCCEEEEEeCCC-----eEEEEEC
Confidence 76553321111111 1112222 3567788877643 3566663
No 143
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=89.94 E-value=8.6 Score=32.96 Aligned_cols=170 Identities=10% Similarity=0.038 Sum_probs=80.1
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecCcccccccccccccccccccCceEEccCCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
++.+|+.....+ .+.+||+.... ..+|. ......++.....+...-.......+..+|+ +.+.........
T Consensus 67 ~g~l~v~~~~~~-----~i~~~~~~g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 67 DGEVWFTENAAN-----KIGRITKKGIIKEYTLPN-PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp TSCEEEEETTTT-----EEEEECTTSCEEEEECSS-TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred CCCEEEeCCCCC-----eEEEECCCCcEEEEeCCC-cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 567777754222 57788886332 33332 1111223322211211111111235677887 555443321111
Q ss_pred CccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCC
Q 016328 111 PRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGP 188 (391)
Q Consensus 111 ~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 188 (391)
...-..++.. ++++|+..-. ...+.+||+ +.+..... ++... ....+++.. ++.||+....
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~-~~~~~i~~~~~g~l~v~~~~-------- 202 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQ------NNAIGRITE-SGDITEFK-IPTPA-SGPVGITKGNDDALWFVEII-------- 202 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEE-CSSTT-CCEEEEEECTTSSEEEEETT--------
T ss_pred CCCCceEEEcCCCCEEEEeCC------CCEEEEEcC-CCcEEEee-CCCCC-CcceeEEECCCCCEEEEccC--------
Confidence 1112233333 4688886521 245889999 77766531 22211 122344443 5678887431
Q ss_pred cceeEEEeCCCCceEECCCCCCCCCC-ceEEE-ECCEEEEEc
Q 016328 189 TAHTFVLDTETKKWQDLPPLPVPRYA-PATQL-WRGRLHVMG 228 (391)
Q Consensus 189 ~~~~~~yd~~~~~W~~~~~~~~~r~~-~~~~~-~~~~iyv~G 228 (391)
...+.+||+ +.+..... ++..... .+++. -+++||+..
T Consensus 203 ~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 203 GNKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEE
T ss_pred CceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEec
Confidence 357889999 77766542 1211112 23333 256788874
No 144
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=89.71 E-value=14 Score=37.47 Aligned_cols=59 Identities=7% Similarity=0.115 Sum_probs=36.1
Q ss_pred eeEEEECCCCCeeeCCCCCCCCC-cceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC
Q 016328 139 HVDIYNFTDNTWGGRFDMPREMA-HSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (391)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~p~~~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (391)
-+.+||+.+++++.........+ ..-.++... ++.||+-.. ..+.+||+++.+|+....
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~~~~~~~ 488 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL----------SALVRFNPEQRSFTTIEK 488 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES----------SCEEEEETTTTEEEECCB
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec----------CceeEEeCCCCeEEEccc
Confidence 38899999988877543111011 112233332 567887532 347899999999988753
No 145
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.65 E-value=11 Score=33.59 Aligned_cols=65 Identities=6% Similarity=0.026 Sum_probs=38.1
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++..++.|+.+ ..+.+||+.+.+-........ ...-.+++. -++.+++.|+.+ ..+..||..+
T Consensus 138 ~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~~--~~~i~~~~~~pdg~~lasg~~d--------g~i~iwd~~~ 201 (343)
T 3lrv_A 138 NTEYFIWADNR------GTIGFQSYEDDSQYIVHSAKS--DVEYSSGVLHKDSLLLALYSPD--------GILDVYNLSS 201 (343)
T ss_dssp -CCEEEEEETT------CCEEEEESSSSCEEEEECCCS--SCCCCEEEECTTSCEEEEECTT--------SCEEEEESSC
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEEEEecCC--CCceEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 45667777754 348889998776544322222 111223333 367788888754 3577899887
Q ss_pred Cc
Q 016328 200 KK 201 (391)
Q Consensus 200 ~~ 201 (391)
.+
T Consensus 202 ~~ 203 (343)
T 3lrv_A 202 PD 203 (343)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 146
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.48 E-value=9.9 Score=33.00 Aligned_cols=98 Identities=9% Similarity=0.092 Sum_probs=52.0
Q ss_pred CCEEEEEeccCC-CCCCcceeEEEECCCCCeeeCCCCCC--CCCcceEEEEE-eC-CEEEEEeCccCCCCCCCcceeEEE
Q 016328 121 KNLLYVFAGYGS-IDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLGMVT-DG-RYIYVVTGQYGPQCRGPTAHTFVL 195 (391)
Q Consensus 121 ~~~vyv~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~p~--~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~~~y 195 (391)
++.+|+...... .......+.+||+.++++..+.. +. +......+++. -+ ++||+... ...+.+|
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~---------~~~l~~~ 97 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADM---------RLGLLVV 97 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEET---------TTEEEEE
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEEC---------CCCEEEE
Confidence 567888721100 00012358999998888876532 10 00112234444 35 78998753 1368899
Q ss_pred eCCCCceEEC-CCCCC--C-CCCceEEE-ECCEEEEEcc
Q 016328 196 DTETKKWQDL-PPLPV--P-RYAPATQL-WRGRLHVMGG 229 (391)
Q Consensus 196 d~~~~~W~~~-~~~~~--~-r~~~~~~~-~~~~iyv~GG 229 (391)
|++ .+...+ ..... + ..-..++. -+++||+...
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 135 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP 135 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec
Confidence 998 777665 32211 1 11223333 3677887753
No 147
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=89.40 E-value=9.5 Score=32.70 Aligned_cols=118 Identities=11% Similarity=0.118 Sum_probs=60.8
Q ss_pred ccccccccccCceEEccCCCCCccC-ceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEE
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLD-GAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~ 167 (391)
..+..||+. .+..... ++..... ++++.- ++.+|+.... ...+.+||+. +++.... ++.. .....++
T Consensus 41 ~~v~~~~~~-~~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~------~~~v~~~d~~-g~~~~~~-~~~~-~~~~~~i 109 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFE-VPTPDAKVMCLIVSSLGDIWFTENG------ANKIGKLSKK-GGFTEYP-LPQP-DSGPYGI 109 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETT------TTEEEEECTT-SCEEEEE-CSST-TCCEEEE
T ss_pred CeEEEECCC-CceEEEE-CCCCCCcceeEEECCCCCEEEEecC------CCeEEEECCC-CCeEEec-CCCC-CCCCccc
Confidence 356777877 5555432 2221122 223322 4678887532 2358899988 6665432 2211 1223444
Q ss_pred EEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCC-CCCceEEE-ECCEEEEEc
Q 016328 168 VTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVP-RYAPATQL-WRGRLHVMG 228 (391)
Q Consensus 168 ~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~-r~~~~~~~-~~~~iyv~G 228 (391)
+.. ++.+|+.... ...+.+||+. .+..... ++.. ..-..++. -+++||+..
T Consensus 110 ~~~~~g~l~v~~~~--------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 110 TEGLNGDIWFTQLN--------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp EECSTTCEEEEETT--------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEE
T ss_pred eECCCCCEEEEccC--------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEe
Confidence 443 6789987532 3568889987 5554332 2211 11223333 356788764
No 148
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=89.40 E-value=4.3 Score=35.82 Aligned_cols=93 Identities=11% Similarity=0.058 Sum_probs=47.9
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCC----eeeCCCCCCCCCcceEEEEE-eCCE-EEEEeCccCCCCCCCcceeEE
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT----WGGRFDMPREMAHSHLGMVT-DGRY-IYVVTGQYGPQCRGPTAHTFV 194 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~p~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~~ 194 (391)
++..+++|+.+ ..+.+||..+.+ -...... ...-.+++. -++. +++.|+.+ ..+..
T Consensus 22 ~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d--------g~i~~ 83 (342)
T 1yfq_A 22 SKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRY----KHPLLCCNFIDNTDLQIYVGTVQ--------GEILK 83 (342)
T ss_dssp GGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEEC----SSCEEEEEEEESSSEEEEEEETT--------SCEEE
T ss_pred CCCEEEEEcCC------CeEEEEEeCCCCccccceeeeec----CCceEEEEECCCCCcEEEEEcCC--------CeEEE
Confidence 44556666543 347788877665 3322211 111223333 3566 66777653 45788
Q ss_pred EeC-CCCceEECCCCCCCCCCceEEEECCEEEEEccCC
Q 016328 195 LDT-ETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (391)
Q Consensus 195 yd~-~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 231 (391)
||. .+.+-..+...+....-.+++...+.+++.|+.+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d 121 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT
T ss_pred EEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC
Confidence 998 8877665544212222223333335566666654
No 149
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=89.21 E-value=9.2 Score=33.09 Aligned_cols=11 Identities=18% Similarity=0.271 Sum_probs=9.4
Q ss_pred eEeeecCCCCe
Q 016328 50 IASNWSPYHNS 60 (391)
Q Consensus 50 ~~~~~d~~~~~ 60 (391)
++..||.++++
T Consensus 46 tV~iWd~~tg~ 56 (318)
T 4ggc_A 46 SVYLWSASSGD 56 (318)
T ss_dssp EEEEEETTTCC
T ss_pred EEEEEECCCCC
Confidence 68889999887
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.03 E-value=7.5 Score=34.23 Aligned_cols=153 Identities=8% Similarity=-0.032 Sum_probs=69.5
Q ss_pred ecCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC-cccccccccccccccccccCceEEccCC
Q 016328 32 VADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAA 108 (391)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 108 (391)
.++.+|+.++.++ .+..||+.+++ ..++........+......+ ...........+..+|+.+.+-...-..
T Consensus 9 ~~~~~~v~~~~~~-----~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 9 AGHEYMIVTNYPN-----NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp TTCEEEEEEETTT-----EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred CCCEEEEEeCCCC-----eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 3678888887544 78899999887 33332110011222222111 1111111234677888776654322222
Q ss_pred CC-----CccCceEEEE-CC-EEEEEecc---CCCCC--CcceeEEEECCCCCeee-CCCCCCCCCcceEEEEE-eCCEE
Q 016328 109 PV-----PRLDGAAIQI-KN-LLYVFAGY---GSIDY--VHSHVDIYNFTDNTWGG-RFDMPREMAHSHLGMVT-DGRYI 174 (391)
Q Consensus 109 p~-----~r~~~~~~~~-~~-~vyv~GG~---~~~~~--~~~~~~~yd~~~~~W~~-~~~~p~~~~r~~~~~~~-~~~~i 174 (391)
+. ...-..++.. ++ .+|+.+.. ..... ....+.+||+.+++-.. +...+.+ +...+++. -++++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP--RQVYLMRAADDGSL 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC--SSCCCEEECTTSCE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC--CcccceeECCCCcE
Confidence 21 1111233332 33 66665421 00000 02468999988743221 1111111 11222333 35567
Q ss_pred EEEeCccCCCCCCCcceeEEEeCCCCce
Q 016328 175 YVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (391)
Q Consensus 175 yv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (391)
|+.+ .++.++|+.+.+-
T Consensus 162 ~~~~-----------~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 162 YVAG-----------PDIYKMDVKTGKY 178 (349)
T ss_dssp EEES-----------SSEEEECTTTCCE
T ss_pred EEcc-----------CcEEEEeCCCCce
Confidence 7742 2277888877653
No 151
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.87 E-value=3.5 Score=37.35 Aligned_cols=128 Identities=13% Similarity=0.045 Sum_probs=61.5
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE--CCE-EEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNL-LYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGM 167 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~ 167 (391)
.++.+|..+.+...+.. ........... ++. |+.... .........++.+|..+.+++.+.. ..+ .......
T Consensus 169 ~l~~~d~~~g~~~~~~~--~~~~~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~~-~~~~~~~ 243 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQ--DTAWLGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HAE-GESCTHE 243 (396)
T ss_dssp EEEEEETTTCCEEEEEE--ESSCEEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CCT-TEEEEEE
T ss_pred eEEEEECCCCcEEeecc--CCcccccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cCC-Cccccce
Confidence 46667776666555432 11111222222 243 444432 2221122469999998888877654 211 1111222
Q ss_pred EE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEE-CCEEEEEcc
Q 016328 168 VT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLW-RGRLHVMGG 229 (391)
Q Consensus 168 ~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG 229 (391)
+. -+++.+++....... ....++++|+.+.+.+.+...+. .. .+..- +++++++.+
T Consensus 244 ~~spdg~~l~~~~~~~~~---~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 244 FWIPDGSAMAYVSYFKGQ---TDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp EECTTSSCEEEEEEETTT---CCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEE
T ss_pred EECCCCCEEEEEecCCCC---ccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEec
Confidence 33 244433333322211 12459999999888776654432 11 22233 677666654
No 152
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=88.76 E-value=11 Score=32.42 Aligned_cols=175 Identities=7% Similarity=0.030 Sum_probs=82.6
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEeecCcccccccccccccccccccCceEEccCCCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPVP 111 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 111 (391)
++.+|+.+... -..+..||+.... ..+.........++++...+...-.......+..||+.......+......
T Consensus 88 ~g~l~v~~~~~----~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 88 SGDIIVTERSP----THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHL 163 (286)
T ss_dssp TTEEEEEECGG----GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTC
T ss_pred CCeEEEEcCCC----CCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCcc
Confidence 67888886321 2357888865444 333321111122333322221111111223577788655433333211110
Q ss_pred ccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCc
Q 016328 112 RLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPT 189 (391)
Q Consensus 112 r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 189 (391)
..-.+++.- ++++||.... ...+.+||+..+....+..-.. .....++++ -+++|||.... .
T Consensus 164 ~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~g~--~~~p~~i~~d~~G~l~v~~~~--------~ 227 (286)
T 1q7f_A 164 EFPNGVVVNDKQEIFISDNR------AHCVKVFNYEGQYLRQIGGEGI--TNYPIGVGINSNGEILIADNH--------N 227 (286)
T ss_dssp SSEEEEEECSSSEEEEEEGG------GTEEEEEETTCCEEEEESCTTT--SCSEEEEEECTTCCEEEEECS--------S
T ss_pred CCcEEEEECCCCCEEEEECC------CCEEEEEcCCCCEEEEEccCCc--cCCCcEEEECCCCCEEEEeCC--------C
Confidence 111222222 4689987643 2458999987654444322110 112234444 36789988642 2
Q ss_pred c-eeEEEeCCCCceEECC-CCCCCCCCceEEE-ECCEEEEEc
Q 016328 190 A-HTFVLDTETKKWQDLP-PLPVPRYAPATQL-WRGRLHVMG 228 (391)
Q Consensus 190 ~-~~~~yd~~~~~W~~~~-~~~~~r~~~~~~~-~~~~iyv~G 228 (391)
+ .+.+||+....-..+. ...... -.+++. -+++|||..
T Consensus 228 ~~~i~~~~~~g~~~~~~~~~~~~~~-~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 228 NFNLTIFTQDGQLISALESKVKHAQ-CFDVALMDDGSVVLAS 268 (286)
T ss_dssp SCEEEEECTTSCEEEEEEESSCCSC-EEEEEEETTTEEEEEE
T ss_pred CEEEEEECCCCCEEEEEcccCCCCc-ceeEEECCCCcEEEEC
Confidence 3 7889998765433332 111111 123333 367888884
No 153
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=88.74 E-value=11 Score=32.67 Aligned_cols=171 Identities=9% Similarity=-0.084 Sum_probs=83.2
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecC-cccccccccccccccccccC-ceEEccCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPEL-KWEKMKAA 108 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~-~W~~~~~~ 108 (391)
.+.+++.|..++ .+..||+++++ ..++.......+.+.....+ ...+ ....+..+|+... .|+.-.+
T Consensus 4 ~~~~lv~~~~~~-----~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs---~~~~V~~~d~~G~~~W~~~~~- 74 (276)
T 3no2_A 4 PQHLLVGGSGWN-----KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS---YSKGAKMITRDGRELWNIAAP- 74 (276)
T ss_dssp CCEEEEECTTCS-----EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE---CBSEEEEECTTSCEEEEEECC-
T ss_pred CCcEEEeeCCCC-----EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe---CCCCEEEECCCCCEEEEEcCC-
Confidence 356677776443 67889998888 55554221122333333333 1111 1346788888322 5764331
Q ss_pred CCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCC-eeeC--CCCCCCCCcceEEEEEeCCEEEEEeCccCCC
Q 016328 109 PVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGR--FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQ 184 (391)
Q Consensus 109 p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~--~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~ 184 (391)
.....+++..+ ++++++....+ ...+..+|++.+. |+.- ...+.+...........++.+++....
T Consensus 75 -~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~---- 144 (276)
T 3no2_A 75 -AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA---- 144 (276)
T ss_dssp -TTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT----
T ss_pred -CCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC----
Confidence 11112333333 56666654321 1347788875542 4431 111111111122233446666665431
Q ss_pred CCCCcceeEEEeCCCC-ceEECCCCCCCCCCceEE-EECCEEEEEccC
Q 016328 185 CRGPTAHTFVLDTETK-KWQDLPPLPVPRYAPATQ-LWRGRLHVMGGS 230 (391)
Q Consensus 185 ~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~ 230 (391)
...+.+||++-+ .|+.-.+. ..+++. ..++.++|.+..
T Consensus 145 ----~~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 145 ----TSEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp ----TTEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEEEECBT
T ss_pred ----CCEEEEECCCCCEEEEEECCC----CccceeEcCCCCEEEEeCC
Confidence 356889998733 36654321 122333 346788877653
No 154
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=88.73 E-value=7.8 Score=34.88 Aligned_cols=99 Identities=10% Similarity=0.063 Sum_probs=48.4
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe---CCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
+..++.|+.+ ..+.+||+.+.+-...-.-+. .. -.++... ++.+++.|+.++ .+..||+.
T Consensus 166 ~~~l~t~s~D------~~v~lwd~~~~~~~~~~~~h~--~~-v~~~~~~~~~~g~~l~sgs~Dg--------~v~~wd~~ 228 (354)
T 2pbi_B 166 DMQILTASGD------GTCALWDVESGQLLQSFHGHG--AD-VLCLDLAPSETGNTFVSGGCDK--------KAMVWDMR 228 (354)
T ss_dssp SSEEEEEETT------SEEEEEETTTCCEEEEEECCS--SC-EEEEEECCCSSCCEEEEEETTS--------CEEEEETT
T ss_pred CCEEEEEeCC------CcEEEEeCCCCeEEEEEcCCC--CC-eEEEEEEeCCCCCEEEEEeCCC--------eEEEEECC
Confidence 4445555543 358889988776433111111 11 1122221 356777887643 46788988
Q ss_pred CCceEECCCCCCCCCCceEEE-ECCEEEEEccCCCCccCCCccceE
Q 016328 199 TKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 199 ~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
+.+....-.... ..-.+++. -++.+++.|+.++ .+..|+
T Consensus 229 ~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd 268 (354)
T 2pbi_B 229 SGQCVQAFETHE-SDVNSVRYYPSGDAFASGSDDA-----TCRLYD 268 (354)
T ss_dssp TCCEEEEECCCS-SCEEEEEECTTSSEEEEEETTS-----CEEEEE
T ss_pred CCcEEEEecCCC-CCeEEEEEeCCCCEEEEEeCCC-----eEEEEE
Confidence 766432211111 11112222 2566777777543 355665
No 155
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=88.66 E-value=5.5 Score=35.25 Aligned_cols=62 Identities=13% Similarity=0.089 Sum_probs=32.5
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCCCcceEEEEE-------eCCEEEEEeCccCCCCCCCccee
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVT-------DGRYIYVVTGQYGPQCRGPTAHT 192 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~r~~~~~~~-------~~~~iyv~GG~~~~~~~~~~~~~ 192 (391)
+.+++.|+.+ ..+.+||..+.+ -..+..... .-.++.. .++.+++.|+.+ ..+
T Consensus 80 ~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~s~~~~~l~~~~~d--------~~i 141 (357)
T 3i2n_A 80 QRYLATGDFG------GNLHIWNLEAPEMPVYSVKGHKE----IINAIDGIGGLGIGEGAPEIVTGSRD--------GTV 141 (357)
T ss_dssp TCCEEEEETT------SCEEEECTTSCSSCSEEECCCSS----CEEEEEEESGGGCC-CCCEEEEEETT--------SCE
T ss_pred CceEEEecCC------CeEEEEeCCCCCccEEEEEeccc----ceEEEeeccccccCCCccEEEEEeCC--------CeE
Confidence 3667777654 347888887765 111211111 1112221 245566777653 346
Q ss_pred EEEeCCCCc
Q 016328 193 FVLDTETKK 201 (391)
Q Consensus 193 ~~yd~~~~~ 201 (391)
..||+.+..
T Consensus 142 ~vwd~~~~~ 150 (357)
T 3i2n_A 142 KVWDPRQKD 150 (357)
T ss_dssp EEECTTSCS
T ss_pred EEEeCCCCC
Confidence 788887754
No 156
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.54 E-value=19 Score=35.08 Aligned_cols=100 Identities=17% Similarity=0.255 Sum_probs=58.4
Q ss_pred ceEEEECCEEEEEeccCCCCCCcceeEEEEC-CCC--CeeeCCCCCCCC---C---cceEEEEEeCCEEEEEeCccCCCC
Q 016328 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNF-TDN--TWGGRFDMPREM---A---HSHLGMVTDGRYIYVVTGQYGPQC 185 (391)
Q Consensus 115 ~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~-~~~--~W~~~~~~p~~~---~---r~~~~~~~~~~~iyv~GG~~~~~~ 185 (391)
.+-++.++.||+.... ...++++|. .+. .|+.-...+... . ....+.++.+++||+...
T Consensus 56 ~~P~v~~g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------ 123 (571)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------
T ss_pred cccEEECCEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------
Confidence 3446679999998652 134899998 766 498743322100 0 011245678999998732
Q ss_pred CCCcceeEEEeCCCCc--eEEC-CCCCCC-CCCceEEEECCEEEEEcc
Q 016328 186 RGPTAHTFVLDTETKK--WQDL-PPLPVP-RYAPATQLWRGRLHVMGG 229 (391)
Q Consensus 186 ~~~~~~~~~yd~~~~~--W~~~-~~~~~~-r~~~~~~~~~~~iyv~GG 229 (391)
...++.+|.++.+ |+.- ...+.. ....+-++.++++|+-.+
T Consensus 124 ---dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~ 168 (571)
T 2ad6_A 124 ---NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCS 168 (571)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECB
T ss_pred ---CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEec
Confidence 3568899998764 8753 221111 112233456888887643
No 157
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=88.52 E-value=10 Score=32.65 Aligned_cols=63 Identities=8% Similarity=0.032 Sum_probs=31.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
++..++.|+.+ ..+.+||..... ........ ..........++. ++.|+.+ ..+..||..+.
T Consensus 154 ~~~~l~~~~~d------~~i~i~d~~~~~-~~~~~~~~--~~i~~~~~~~~~~-~~~~~~d--------g~i~i~d~~~~ 215 (313)
T 3odt_A 154 SENKFLTASAD------KTIKLWQNDKVI-KTFSGIHN--DVVRHLAVVDDGH-FISCSND--------GLIKLVDMHTG 215 (313)
T ss_dssp TTTEEEEEETT------SCEEEEETTEEE-EEECSSCS--SCEEEEEEEETTE-EEEEETT--------SEEEEEETTTC
T ss_pred CCCEEEEEECC------CCEEEEecCceE-EEEeccCc--ccEEEEEEcCCCe-EEEccCC--------CeEEEEECCch
Confidence 56666676654 247778833221 11211111 1122223334666 6666543 45788898765
Q ss_pred c
Q 016328 201 K 201 (391)
Q Consensus 201 ~ 201 (391)
+
T Consensus 216 ~ 216 (313)
T 3odt_A 216 D 216 (313)
T ss_dssp C
T ss_pred h
Confidence 4
No 158
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=88.50 E-value=3.8 Score=36.30 Aligned_cols=150 Identities=7% Similarity=-0.112 Sum_probs=70.7
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEeecC--ccccccc--ccccccccccccCceEEc-c
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK--DVVPKRI--LPATFQDLPAPELKWEKM-K 106 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~~~--~~~~~~~--~~~~~~~~d~~~~~W~~~-~ 106 (391)
++.||+.+..++ .+..||+.+++ ..+.........+++....+ +...... ....+..+|+.+.....+ .
T Consensus 55 ~g~l~~~~~~~~-----~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~ 129 (333)
T 2dg1_A 55 QGQLFLLDVFEG-----NIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIE 129 (333)
T ss_dssp TSCEEEEETTTC-----EEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEEC
T ss_pred CCCEEEEECCCC-----EEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc
Confidence 566787765332 67889998877 33321111111222221111 1111000 012577888877665422 2
Q ss_pred CCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CC-EEEEEeCccCC
Q 016328 107 AAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTGQYGP 183 (391)
Q Consensus 107 ~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~-~iyv~GG~~~~ 183 (391)
.......-..++.. ++++|+.............++++|+.+.+...+..- .....+++.. ++ .||+....
T Consensus 130 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~i~~~~dg~~l~v~~~~--- 202 (333)
T 2dg1_A 130 DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN----ISVANGIALSTDEKVLWVTETT--- 202 (333)
T ss_dssp SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE----ESSEEEEEECTTSSEEEEEEGG---
T ss_pred cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC----CCcccceEECCCCCEEEEEeCC---
Confidence 22111111222222 567887653221111234689999887776654211 0112233332 33 58876422
Q ss_pred CCCCCcceeEEEeCCC
Q 016328 184 QCRGPTAHTFVLDTET 199 (391)
Q Consensus 184 ~~~~~~~~~~~yd~~~ 199 (391)
...+++||+.+
T Consensus 203 -----~~~i~~~d~~~ 213 (333)
T 2dg1_A 203 -----ANRLHRIALED 213 (333)
T ss_dssp -----GTEEEEEEECT
T ss_pred -----CCeEEEEEecC
Confidence 35678888754
No 159
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.92 E-value=22 Score=35.45 Aligned_cols=28 Identities=0% Similarity=-0.378 Sum_probs=17.4
Q ss_pred cCEEEEecCC-CCcccceeEeeecCCCCe
Q 016328 33 ADFFWASSSK-FTSSYLNIASNWSPYHNS 60 (391)
Q Consensus 33 ~~~ly~~GG~-~~~~~~~~~~~~d~~~~~ 60 (391)
++...++++. ++......+..||..+++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~ 75 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQ 75 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCC
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCc
Confidence 4444444443 554445578999998877
No 160
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=87.65 E-value=16 Score=33.02 Aligned_cols=64 Identities=6% Similarity=-0.122 Sum_probs=33.6
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++.++++|+.+ ..+.+||.....-..+.... ..-.+++.. ++..++.++.+ ..+..||..+
T Consensus 119 ~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~ 180 (425)
T 1r5m_A 119 DGNSIVTGVEN------GELRLWNKTGALLNVLNFHR----APIVSVKWNKDGTHIISMDVE--------NVTILWNVIS 180 (425)
T ss_dssp TSSEEEEEETT------SCEEEEETTSCEEEEECCCC----SCEEEEEECTTSSEEEEEETT--------CCEEEEETTT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeeccCCC----ccEEEEEECCCCCEEEEEecC--------CeEEEEECCC
Confidence 45667777654 24778884444333332211 112233332 45556666543 3467788876
Q ss_pred Cce
Q 016328 200 KKW 202 (391)
Q Consensus 200 ~~W 202 (391)
.+-
T Consensus 181 ~~~ 183 (425)
T 1r5m_A 181 GTV 183 (425)
T ss_dssp TEE
T ss_pred CcE
Confidence 654
No 161
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=87.51 E-value=16 Score=32.85 Aligned_cols=63 Identities=2% Similarity=-0.128 Sum_probs=35.2
Q ss_pred ceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-e-CCE-EEEEeCccCCCCCCCcceeEEEeCCCCceEECCC
Q 016328 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-D-GRY-IYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (391)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~-~~~-iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (391)
..++++|+.+.+...+...+ ........ - ++. |+.... .... .....++.+|+.+.+++.+..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~----~~~~~~~~sp~dg~~l~~~~~-~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDT----AWLGHPIYRPFDDSTVGFCHE-GPHD--LVDARMWLVNEDGSNVRKIKE 233 (396)
T ss_dssp EEEEEEETTTCCEEEEEEES----SCEEEEEEETTEEEEEEEEEC-SCSS--SCSCCCEEEETTSCCCEESSC
T ss_pred ceEEEEECCCCcEEeeccCC----cccccceECCCCCCEEEEEec-CCCC--CCCceEEEEECCCCceeEeec
Confidence 46899999988876654221 11122222 2 344 444432 1111 112578999998888777754
No 162
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=87.19 E-value=13 Score=32.28 Aligned_cols=215 Identities=8% Similarity=0.047 Sum_probs=100.6
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEeecC-cccccccccccccccccccCceEEccCCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPV 110 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~ 110 (391)
++.||++.... ..+.+||+.++. ..+... ....+++....+ ...+ ....+..||+.+.+++.+...+.
T Consensus 24 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~dG~l~v~---~~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPA-----KKVCRWDSFTKQVQRVTMD--APVSSVALRQSGGYVAT---IGTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTCCEEEEECS--SCEEEEEEBTTSSEEEE---ETTEEEEEETTTTEEEEEEECCT
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEeCC--CceEEEEECCCCCEEEE---ECCeEEEEECCCCcEEEEEecCC
Confidence 46777776533 368899998876 333221 111122222111 1111 12367888988888777654432
Q ss_pred --CccCceEEEE--CCEEEEEeccCCC-----CCCcceeEEEECCCCCeeeC-CCCCCCCCcceEEEEEe--CCEEEEEe
Q 016328 111 --PRLDGAAIQI--KNLLYVFAGYGSI-----DYVHSHVDIYNFTDNTWGGR-FDMPREMAHSHLGMVTD--GRYIYVVT 178 (391)
Q Consensus 111 --~r~~~~~~~~--~~~vyv~GG~~~~-----~~~~~~~~~yd~~~~~W~~~-~~~p~~~~r~~~~~~~~--~~~iyv~G 178 (391)
+........+ ++++|+..-.... ......++++|+.. +...+ ..+.. ..+++.. +..||+..
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~-----pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI-----SNGLDWSLDHKIFYYID 167 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB-----EEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc-----ccceEEcCCCCEEEEec
Confidence 1111222223 5677774321111 11234688888753 33322 11111 2234443 44688875
Q ss_pred CccCCCCCCCcceeEEEeC--CCCceEE---CCCCCCC-CCCceEEE-ECCEEEEEccCCCCccCCCccceEeeeecCCc
Q 016328 179 GQYGPQCRGPTAHTFVLDT--ETKKWQD---LPPLPVP-RYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKP 251 (391)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~--~~~~W~~---~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~ 251 (391)
.. ...+++||. ++.+... +..++.. ..-..+++ -++.||+.....+ . +..+|+
T Consensus 168 ~~--------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~-----~-------v~~~d~ 227 (297)
T 3g4e_A 168 SL--------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG-----R-------VIRLDP 227 (297)
T ss_dssp GG--------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT-----E-------EEEECT
T ss_pred CC--------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC-----E-------EEEEcC
Confidence 32 356778875 4544321 1112111 11122333 3567887742211 1 222346
Q ss_pred ccCCceeecCCCCCCcceeEEEEC----CEEEEEeCCC
Q 016328 252 LEKEWRTEIPIPRGGPHRACVVVD----DRLLVIGGQE 285 (391)
Q Consensus 252 ~~~~W~~~~~~p~~~~~~~~~~~~----~~i~v~GG~~ 285 (391)
++.+....-++|... ..++.++ +.|||.....
T Consensus 228 ~tG~~~~~i~~p~~~--~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 228 VTGKRLQTVKLPVDK--TTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp TTCCEEEEEECSSSB--EEEEEEESGGGCEEEEEEBCT
T ss_pred CCceEEEEEECCCCC--ceEEEEeCCCCCEEEEEcCCc
Confidence 655554444455332 3445553 4788876543
No 163
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=86.45 E-value=12 Score=32.49 Aligned_cols=93 Identities=10% Similarity=0.025 Sum_probs=46.9
Q ss_pred cccccccccCceEEc-cCCCC--Ccc-CceEEEE-CCEEEEEeccCC---------CCCCcceeEEEECCCCCeeeCC-C
Q 016328 91 TFQDLPAPELKWEKM-KAAPV--PRL-DGAAIQI-KNLLYVFAGYGS---------IDYVHSHVDIYNFTDNTWGGRF-D 155 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~-~~~p~--~r~-~~~~~~~-~~~vyv~GG~~~---------~~~~~~~~~~yd~~~~~W~~~~-~ 155 (391)
.+..||+. .+...+ ..... +.. -..++.. ++++|+....+. .......+++||+. .+...+. .
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 57778877 666555 32221 111 1223322 568888764321 11112468899987 5554431 1
Q ss_pred CCCCCCcceEEEEEe-----CC-EEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 156 MPREMAHSHLGMVTD-----GR-YIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 156 ~p~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
+.. ...++.. ++ .||+.... ...+++||+.
T Consensus 171 ~~~-----~~~i~~~~~~d~dg~~l~v~~~~--------~~~i~~~~~~ 206 (314)
T 1pjx_A 171 FQF-----PNGIAVRHMNDGRPYQLIVAETP--------TKKLWSYDIK 206 (314)
T ss_dssp ESS-----EEEEEEEECTTSCEEEEEEEETT--------TTEEEEEEEE
T ss_pred CCC-----cceEEEecccCCCCCEEEEEECC--------CCeEEEEECC
Confidence 111 1233333 33 57777432 3568888875
No 164
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.41 E-value=26 Score=34.38 Aligned_cols=99 Identities=13% Similarity=0.196 Sum_probs=55.9
Q ss_pred ceEEEECCEEEEEeccCCCCCCcceeEEEEC-CCCC--eeeCCCCCCCC---C---cceEEEEE--eCCE----EEEEeC
Q 016328 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNF-TDNT--WGGRFDMPREM---A---HSHLGMVT--DGRY----IYVVTG 179 (391)
Q Consensus 115 ~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~-~~~~--W~~~~~~p~~~---~---r~~~~~~~--~~~~----iyv~GG 179 (391)
.+-++.++.||+.+.. ...++++|. .+.+ |+.-...+... . ....+.++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp SCCEEETTEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred eccEEECCEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 3446679999998752 134899998 6664 88754332100 0 01123455 5777 887532
Q ss_pred ccCCCCCCCcceeEEEeCCCCc--eEECCCCCCC--CCCceEEEECCEEEEEc
Q 016328 180 QYGPQCRGPTAHTFVLDTETKK--WQDLPPLPVP--RYAPATQLWRGRLHVMG 228 (391)
Q Consensus 180 ~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~--r~~~~~~~~~~~iyv~G 228 (391)
...++.+|.++.+ |+.-..-+.. ....+-++.+++||+-.
T Consensus 130 ---------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~ 173 (599)
T 1w6s_A 130 ---------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGS 173 (599)
T ss_dssp ---------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECC
T ss_pred ---------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEe
Confidence 3568899988765 8753211111 11223345788887643
No 165
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=86.34 E-value=4.1 Score=37.37 Aligned_cols=99 Identities=8% Similarity=0.036 Sum_probs=51.2
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
+++.++.|+.+ ..+.+||..+.+-... +... ...-.+++.. ++..++.|+.+ ..+..||..+
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~--~~~h-~~~v~~~~~~p~~~~l~s~s~d--------~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMI--LQGH-EQDIYSLDYFPSGDKLVSGSGD--------RTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEE--ECCC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEE--EccC-CCCEEEEEEcCCCCEEEEecCC--------CcEEEEECCC
Confidence 56677777754 2488899887654332 1111 1112233332 45556666643 4577889887
Q ss_pred CceEECCCCCCCCCCceEEEE--CCEEEEEccCCCCccCCCccceE
Q 016328 200 KKWQDLPPLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 200 ~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
.+....-... ....+++.. ++++++.|+.++ .+..|+
T Consensus 197 ~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd 235 (393)
T 1erj_A 197 GQCSLTLSIE--DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWD 235 (393)
T ss_dssp TEEEEEEECS--SCEEEEEECSTTCCEEEEEETTS-----CEEEEE
T ss_pred CeeEEEEEcC--CCcEEEEEECCCCCEEEEEcCCC-----cEEEEE
Confidence 6543221111 111222222 567788877643 355565
No 166
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=86.27 E-value=4.5 Score=36.28 Aligned_cols=96 Identities=11% Similarity=0.087 Sum_probs=47.0
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCC--CCCceEEE-ECCEEEEEccCCCCccCCCccceEeeee
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVP--RYAPATQL-WRGRLHVMGGSGENRYTPEVDHWSLAVK 247 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~--r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 247 (391)
++++++.||.++ .+..||.++.+|.....+... ..-.+++. -++++++.|+.+. .+..|+.
T Consensus 27 ~g~~las~~~D~--------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-----~v~iw~~--- 90 (345)
T 3fm0_A 27 AGTLLASCGGDR--------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-----TTCIWKK--- 90 (345)
T ss_dssp TSSCEEEEETTS--------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEE---
T ss_pred CCCEEEEEcCCC--------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-----cEEEEEc---
Confidence 667777777543 456778877777543222111 11122222 2567777777643 3556663
Q ss_pred cCCcccCCceeecCCCCCCcceeEEEE--CCEEEEEeCCCC
Q 016328 248 DGKPLEKEWRTEIPIPRGGPHRACVVV--DDRLLVIGGQEG 286 (391)
Q Consensus 248 ~~d~~~~~W~~~~~~p~~~~~~~~~~~--~~~i~v~GG~~~ 286 (391)
.+..+..+..+..-.....++.+ ++++++.|+.++
T Consensus 91 ----~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~ 127 (345)
T 3fm0_A 91 ----NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK 127 (345)
T ss_dssp ----CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred ----cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC
Confidence 23333333222211111123333 567777777653
No 167
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=85.84 E-value=14 Score=30.74 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=31.8
Q ss_pred EEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEE--C----CCCCCCCCCceEEEE--CCEEEEEccC
Q 016328 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD--L----PPLPVPRYAPATQLW--RGRLHVMGGS 230 (391)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~--~----~~~~~~r~~~~~~~~--~~~iyv~GG~ 230 (391)
+++..++++|+|=| ..+|+++.....+.. + +.+|. .--++... ++++|+|=|.
T Consensus 28 Ai~~~~g~~y~Fkg----------~~~wr~~~~~~~~~p~~I~~~wp~Lp~--~iDAa~~~~~~~~iyfFkG~ 88 (207)
T 1pex_A 28 AITSLRGETMIFKD----------RFFWRLHPQQVDAELFLTKSFWPELPN--RIDAAYEHPSHDLIFIFRGR 88 (207)
T ss_dssp EEEEETTEEEEEET----------TEEEEECSSSSCCEEEEHHHHCTTSCS--SCCEEEEETTTTEEEEEETT
T ss_pred EEEeCCCcEEEEEC----------CEEEEEeCCCcCCCceehhHhccCCCC--CccEEEEeccCCcEEEEccC
Confidence 45568999999954 457777765544322 1 23442 22233433 6899999764
No 168
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.26 E-value=17 Score=32.62 Aligned_cols=65 Identities=9% Similarity=0.076 Sum_probs=30.6
Q ss_pred EEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC--C-CCCCCCceEEE-ECCEEEEEccCCCCccCCCccc
Q 016328 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP--L-PVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDH 241 (391)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~--~-~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 241 (391)
+++...+..++.|+.+ ..+..||..+.+-..... + .....-.+++. -++++++.|+.++ .+..
T Consensus 87 ~~~~s~d~~l~~~s~d--------g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~i 153 (344)
T 4gqb_B 87 DLTWVGERGILVASDS--------GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKV 153 (344)
T ss_dssp EEEEETTTEEEEEETT--------SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEE
T ss_pred EEEEeCCCeEEEEECC--------CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEE
Confidence 3444444445566543 356778887654211110 0 01111112222 2667777777643 3666
Q ss_pred eE
Q 016328 242 WS 243 (391)
Q Consensus 242 ~~ 243 (391)
|+
T Consensus 154 wd 155 (344)
T 4gqb_B 154 WD 155 (344)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 169
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=85.21 E-value=32 Score=34.27 Aligned_cols=80 Identities=13% Similarity=0.020 Sum_probs=46.7
Q ss_pred eEEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCC-CCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCccee
Q 016328 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFD-MPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHT 192 (391)
Q Consensus 116 ~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~-~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 192 (391)
+.++.+++||+... ...+..+|..+.+ |+.-.. -+........+.++.++.||+..+..... ....+
T Consensus 123 ~~a~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~---~~g~v 192 (677)
T 1kb0_A 123 GVALWKGKVYVGAW-------DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYG---VRGYI 192 (677)
T ss_dssp CCEEETTEEEEECT-------TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTC---CBCEE
T ss_pred CceEECCEEEEEcC-------CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccC---CCCEE
Confidence 34567889988642 2458999998775 887422 11100111223446788888754321111 14678
Q ss_pred EEEeCCCCc--eEEC
Q 016328 193 FVLDTETKK--WQDL 205 (391)
Q Consensus 193 ~~yd~~~~~--W~~~ 205 (391)
+.||.++.+ |+.-
T Consensus 193 ~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 193 TAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEE
T ss_pred EEEECCCCcEEEEec
Confidence 999998765 8754
No 170
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=85.16 E-value=7.4 Score=39.64 Aligned_cols=94 Identities=9% Similarity=-0.009 Sum_probs=51.7
Q ss_pred cccccccccCceEEccCCCCCcc--C-ceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCC--CCCCC-cc
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRL--D-GAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM--PREMA-HS 163 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~--~-~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~~~-r~ 163 (391)
-+..||+.+.+++.......... . .++... ++.|++... .-+.+||+.+++|+..... +.+.. ..
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTIEKEKDGTPVVSKQ 499 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--------SCEEEEETTTTEEEECCBCTTCCBCCCCC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEccccccccccCCce
Confidence 46678888777766543111111 1 122221 457777542 1388999999999886432 11111 11
Q ss_pred eEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCCce
Q 016328 164 HLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (391)
Q Consensus 164 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (391)
-.++.. -++.||+... .-+.+||+.++++
T Consensus 500 i~~i~~d~~g~lWigt~----------~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 500 ITTLFRDSHKRLWIGGE----------EGLSVFKQEGLDI 529 (795)
T ss_dssp EEEEEECTTCCEEEEES----------SCEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEeC----------CceEEEeCCCCeE
Confidence 122222 3577887532 2378899988887
No 171
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=84.86 E-value=9.3 Score=34.19 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=46.7
Q ss_pred EEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-e-CCEEEEEeCccCCCCCCCcceeEEEeCCCCc
Q 016328 124 LYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-D-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (391)
Q Consensus 124 vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (391)
.+.+|.+.....-.-.++.+|..+.+++.+..... .... .++. - +..||+.+...... ..-.++.+|..+.+
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~--~~p~-~l~~spdg~~l~~~~~~~~~~---~~v~~~~~~~~~g~ 88 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEV--ANPS-YLIPSADGKFVYSVNEFSKDQ---AAVSAFAFDKEKGT 88 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEEC--SCCC-SEEECTTSSEEEEEECCSSTT---CEEEEEEEETTTTE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccC--CCCc-eEEECCCCCEEEEEEccCCCC---CcEEEEEEeCCCCc
Confidence 34456665433222346667888888877544322 1111 2222 2 44577765432111 02344666766677
Q ss_pred eEECCCCCCCCCC-ceEEEECCE-EEEEc
Q 016328 202 WQDLPPLPVPRYA-PATQLWRGR-LHVMG 228 (391)
Q Consensus 202 W~~~~~~~~~r~~-~~~~~~~~~-iyv~G 228 (391)
.+.+...+..... ..++. +++ ||+..
T Consensus 89 ~~~~~~~~~~~~~p~~~~~-dg~~l~~~~ 116 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTT-NGKNIVTAN 116 (361)
T ss_dssp EEEEEEEECSSSCEEEEEE-CSSEEEEEE
T ss_pred EEEeeEeccCCCCcEEEEE-CCCEEEEEE
Confidence 7766544322222 22233 554 66554
No 172
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=84.83 E-value=16 Score=31.70 Aligned_cols=99 Identities=5% Similarity=-0.095 Sum_probs=50.2
Q ss_pred ccccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCC--CCCcceEE
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLG 166 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~~~r~~~~ 166 (391)
..+++||+.+.+-.... .+. .-.+++.. ++++|+.. .+.+.+||+++++++.+...+. +..+....
T Consensus 35 ~~i~~~d~~~~~~~~~~-~~~--~~~~i~~~~dG~l~v~~--------~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di 103 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVT-MDA--PVSSVALRQSGGYVATI--------GTKFCALNWKEQSAVVLATVDNDKKNNRFNDG 103 (297)
T ss_dssp TEEEEEETTTCCEEEEE-CSS--CEEEEEEBTTSSEEEEE--------TTEEEEEETTTTEEEEEEECCTTCSSEEEEEE
T ss_pred CEEEEEECCCCcEEEEe-CCC--ceEEEEECCCCCEEEEE--------CCeEEEEECCCCcEEEEEecCCCCCCCCCCCE
Confidence 36777887766543322 111 11122222 55666653 1358999999998877644322 11222222
Q ss_pred EEEeCCEEEEEeCccCCC---CCCCcceeEEEeCCC
Q 016328 167 MVTDGRYIYVVTGQYGPQ---CRGPTAHTFVLDTET 199 (391)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~---~~~~~~~~~~yd~~~ 199 (391)
.+.-+++||+..-..... .......++++|+..
T Consensus 104 ~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 104 KVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp EECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred EECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 333467888742111100 001246789999864
No 173
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=84.66 E-value=24 Score=35.19 Aligned_cols=174 Identities=11% Similarity=0.050 Sum_probs=80.0
Q ss_pred cccccccccCceEEccCCCCCccCceEEEECC-EEEEEeccCCC-------CCCcceeEEEECCCCCee--eCCCCCC-C
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQIKN-LLYVFAGYGSI-------DYVHSHVDIYNFTDNTWG--GRFDMPR-E 159 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~vyv~GG~~~~-------~~~~~~~~~yd~~~~~W~--~~~~~p~-~ 159 (391)
.++.+|..+.+.... .++..+....+-. ++ .||.. -.+.. ......++++++.+.+=+ .+-..+. .
T Consensus 156 ~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~-~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~ 232 (693)
T 3iuj_A 156 EIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYS-SYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQ 232 (693)
T ss_dssp EEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEE-ESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGG
T ss_pred EEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEE-EecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCC
Confidence 567778777775443 1121112222223 55 44443 33321 012345888888776432 1111111 0
Q ss_pred CCcceEEEE-EeCCE-EEEEeCccCCCCCCCcceeEEEeCCCC--ceEECCCCCCCCCCceEEEECCEEEEEccCCCCcc
Q 016328 160 MAHSHLGMV-TDGRY-IYVVTGQYGPQCRGPTAHTFVLDTETK--KWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRY 235 (391)
Q Consensus 160 ~~r~~~~~~-~~~~~-iyv~GG~~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~ 235 (391)
+.....+. .-+++ |++.... +.. .++++.+|..+. .|+.+.+-..... ......+++||+....+.
T Consensus 233 -~~~~~~~~~SpDg~~l~~~~~~-~~~----~~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~--- 302 (693)
T 3iuj_A 233 -HHRYVGATVTEDDRFLLISAAN-STS----GNRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA--- 302 (693)
T ss_dssp -CCSEEEEEECTTSCEEEEEEES-SSS----CCEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC---
T ss_pred -CeEEEEEEEcCCCCEEEEEEcc-CCC----CcEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC---
Confidence 11122222 23454 4443222 111 368999998765 6776643222211 123456888998865432
Q ss_pred CCCccceEeeeecCC-cccCCceeecCCCCCCcceeEEEECCEEEEEeC
Q 016328 236 TPEVDHWSLAVKDGK-PLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGG 283 (391)
Q Consensus 236 ~~~~~~~~~~~~~~d-~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG 283 (391)
..+.+...+.+ +....|+.+.+-..... .....++.|++..-
T Consensus 303 ----~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 303 ----PNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp ----TTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEE
T ss_pred ----CCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEE
Confidence 11222222222 23346887654333322 44555677666543
No 174
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.29 E-value=24 Score=32.15 Aligned_cols=100 Identities=11% Similarity=0.101 Sum_probs=55.8
Q ss_pred cccccccccCceEEccCC---CCC--c----c-C--ceEEEE----CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC
Q 016328 91 TFQDLPAPELKWEKMKAA---PVP--R----L-D--GAAIQI----KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF 154 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~---p~~--r----~-~--~~~~~~----~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~ 154 (391)
.+++.+....+|+++... +.. + . . .+++.. .+.||+.+- ..-+++.+-...+|+.+.
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECH
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECc
Confidence 355666666789988642 211 1 1 1 122322 467777542 124788887888999874
Q ss_pred CC---CC------------CCCcceEEEEEe---CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC
Q 016328 155 DM---PR------------EMAHSHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP 206 (391)
Q Consensus 155 ~~---p~------------~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~ 206 (391)
.+ |. +.....+++++. .+.||+... ...+++.+....+|+.+.
T Consensus 155 ~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~---------~ggl~~s~DgG~tW~~~~ 215 (394)
T 3b7f_A 155 GFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS---------SGGVFESTDAGTDWKPLN 215 (394)
T ss_dssp HHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE---------TBEEEEESSTTSSCEECC
T ss_pred CccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC---------CCCEEEECCCCCCceECC
Confidence 32 21 001122344443 357887643 134778888889999885
No 175
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=84.18 E-value=21 Score=31.23 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=40.3
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-C-CEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G-RYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
++++|+.++.+ ..+.++|+.+.+....-.++. ......++.. + +.+|+.+.. ...+..||+.
T Consensus 10 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~~~v~~~~--------~~~i~~~d~~ 73 (349)
T 1jmx_B 10 GHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPD--KFGPGTAMMAPDNRTAYVLNNH--------YGDIYGIDLD 73 (349)
T ss_dssp TCEEEEEEETT------TEEEEEETTTTEEEEEEECSS--CCSSCEEEECTTSSEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEeCCC------CeEEEEECCCCcEEEEEecCC--CCCCceeEECCCCCEEEEEeCC--------CCcEEEEeCC
Confidence 56788887653 458999998886554222222 0011233332 3 468887632 3578999998
Q ss_pred CCceE
Q 016328 199 TKKWQ 203 (391)
Q Consensus 199 ~~~W~ 203 (391)
+.+-.
T Consensus 74 t~~~~ 78 (349)
T 1jmx_B 74 TCKNT 78 (349)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 87644
No 176
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=83.85 E-value=22 Score=31.21 Aligned_cols=98 Identities=7% Similarity=0.046 Sum_probs=45.6
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-------CCEEEEEeCccCCCCCCCcceeE
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-------GRYIYVVTGQYGPQCRGPTAHTF 193 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~~~~~~ 193 (391)
++.+++.|+.+. .+.+||.....-..+..-. ..-..+... ++.+++.|+.+ ..+.
T Consensus 118 ~~~~l~s~s~D~------~i~vwd~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~ 179 (319)
T 3frx_A 118 KASMIISGSRDK------TIKVWTIKGQCLATLLGHN----DWVSQVRVVPNEKADDDSVTIISAGND--------KMVK 179 (319)
T ss_dssp TSCEEEEEETTS------CEEEEETTSCEEEEECCCS----SCEEEEEECCC------CCEEEEEETT--------SCEE
T ss_pred CCCEEEEEeCCC------eEEEEECCCCeEEEEeccC----CcEEEEEEccCCCCCCCccEEEEEeCC--------CEEE
Confidence 456777777653 3777887654333221111 111122222 23356666643 3466
Q ss_pred EEeCCCCceEECCCCCCCCC-CceEEE-ECCEEEEEccCCCCccCCCccceE
Q 016328 194 VLDTETKKWQDLPPLPVPRY-APATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 194 ~yd~~~~~W~~~~~~~~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
.||..+.+-.. .+..... -.+++. -++++++.|+.++ .+..|+
T Consensus 180 ~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~~~dg-----~i~iwd 224 (319)
T 3frx_A 180 AWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASAGKDG-----EIMLWN 224 (319)
T ss_dssp EEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEEETTC-----EEEEEE
T ss_pred EEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEE
Confidence 78876654221 1111111 112222 2567777777543 355665
No 177
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=83.27 E-value=35 Score=33.19 Aligned_cols=98 Identities=11% Similarity=-0.030 Sum_probs=47.2
Q ss_pred cccccccccCceEEccCCCCC-ccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVP-RLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~ 169 (391)
.+..+|..+.+....-..... ......+..++..++.++.+ ..+..+|+.+.+-... +... ...-.+++.
T Consensus 262 ~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d------~~i~~~~~~~~~~~~~--~~gh-~~~v~~l~~ 332 (611)
T 1nr0_A 262 TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN------GFINFVNPELGSIDQV--RYGH-NKAITALSS 332 (611)
T ss_dssp EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT------CCEEEEETTTTEEEEE--ECCC-SSCEEEEEE
T ss_pred eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC------CcEEEEeCCCCCcceE--EcCC-CCCEEEEEE
Confidence 566677666554332111111 11122233455666666554 2367788776542221 1110 111123333
Q ss_pred -eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEEC
Q 016328 170 -DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (391)
Q Consensus 170 -~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~ 205 (391)
-+++.++.|+.+ ..+..+|..+.+-...
T Consensus 333 spdg~~l~s~s~D--------~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 333 SADGKTLFSADAE--------GHINSWDISTGISNRV 361 (611)
T ss_dssp CTTSSEEEEEETT--------SCEEEEETTTCCEEEC
T ss_pred eCCCCEEEEEeCC--------CcEEEEECCCCceeee
Confidence 256666777654 3467888887765443
No 178
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=82.96 E-value=27 Score=31.55 Aligned_cols=60 Identities=13% Similarity=0.223 Sum_probs=30.7
Q ss_pred CEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC--CCCCCCCCc--eEEE--ECCEEEEEccCCCCccCCCccceEe
Q 016328 172 RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAP--ATQL--WRGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 172 ~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~--~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
+..++.|+.+ ..+..||..+.+-...- ..+...... ++.. .++.+++.|+.++ .+..|++
T Consensus 170 ~~~l~s~s~D--------~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~ 235 (380)
T 3iz6_a 170 ETRLITGSGD--------QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDL 235 (380)
T ss_dssp SSCEEEECTT--------SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEET
T ss_pred CCEEEEECCC--------CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEEC
Confidence 3445566543 34667888876643221 222222221 1111 2567888887653 4666763
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=82.79 E-value=40 Score=33.51 Aligned_cols=181 Identities=12% Similarity=0.034 Sum_probs=81.0
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCC----------CCcceeEEEECCCCCee--eCCCCC
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSID----------YVHSHVDIYNFTDNTWG--GRFDMP 157 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~----------~~~~~~~~yd~~~~~W~--~~~~~p 157 (391)
.++.+|..+.+..... ++... ..+++.. +++-++++..+... .....++++++.+.+.+ .+...+
T Consensus 152 ~i~v~d~~tg~~~~~~-~~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~ 229 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDV-LERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFP 229 (710)
T ss_dssp EEEEEETTTTEEEEEE-EEEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCT
T ss_pred EEEEEECCCCCCCccc-ccCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccC
Confidence 5677777777655431 11111 1223332 44444444333220 12345889999887643 221211
Q ss_pred CCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC------C--ceEECCCCCCCCCCceEEEECCEEEEEc
Q 016328 158 REMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET------K--KWQDLPPLPVPRYAPATQLWRGRLHVMG 228 (391)
Q Consensus 158 ~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~------~--~W~~~~~~~~~r~~~~~~~~~~~iyv~G 228 (391)
.. ......... -+++..++....+.. ..++++.+|..+ . .++.+..-.... .......++.||+.+
T Consensus 230 ~~-~~~~~~~~~SpDg~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s 304 (710)
T 2xdw_A 230 DE-PKWMGGAELSDDGRYVLLSIREGCD---PVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKT 304 (710)
T ss_dssp TC-TTCEEEEEECTTSCEEEEEEECSSS---SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEE
T ss_pred CC-CeEEEEEEEcCCCCEEEEEEEccCC---CccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEE
Confidence 10 122223333 344433333322211 147899999876 3 577665322222 122334567888886
Q ss_pred cCCCCccCCCccceEeeeecCCc-ccCCceeecCCCCCCcceeEEEE-CCEEEEEeCCC
Q 016328 229 GSGENRYTPEVDHWSLAVKDGKP-LEKEWRTEIPIPRGGPHRACVVV-DDRLLVIGGQE 285 (391)
Q Consensus 229 G~~~~~~~~~~~~~~~~~~~~d~-~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~ 285 (391)
.... ..+.+.+.+.+. ....|+.+.+-.....-..+... ++.+++....+
T Consensus 305 ~~~~-------~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 305 NRHS-------PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp CTTC-------TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred CCCC-------CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 5321 112222222211 11258776443221111233445 67777766543
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=82.66 E-value=25 Score=35.02 Aligned_cols=179 Identities=9% Similarity=0.074 Sum_probs=82.2
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCC-------CCcceeEEEECCCCCee--eCCCCCCCC
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSID-------YVHSHVDIYNFTDNTWG--GRFDMPREM 160 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~-------~~~~~~~~yd~~~~~W~--~~~~~p~~~ 160 (391)
.++.+|..+.+......++.... .+++.. +++.++++..+... .....++++++.+.+-+ .+...+..
T Consensus 148 ~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~- 225 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGD- 225 (695)
T ss_dssp EEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCC-
T ss_pred EEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCC-
Confidence 56777777766531111121111 222222 55656665554321 12345899999887632 22222221
Q ss_pred CcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCc
Q 016328 161 AHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEV 239 (391)
Q Consensus 161 ~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 239 (391)
......... -+++..++...++. ..++++.+|..+..|+.+..-.... ...+..++.+|+....+.
T Consensus 226 ~~~~~~~~~SpDG~~l~~~~~~~~----~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~~------- 292 (695)
T 2bkl_A 226 PTTFLQSDLSRDGKYLFVYILRGW----SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEGA------- 292 (695)
T ss_dssp TTCEEEEEECTTSCCEEEEEEETT----TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTTC-------
T ss_pred CEEEEEEEECCCCCEEEEEEeCCC----CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCCC-------
Confidence 122223333 34554444433321 1568888888777787775322221 222235666665543211
Q ss_pred cceEeeeecCC-cccCCceeecCCC-CCCcceeEEEECCEEEEEeCCC
Q 016328 240 DHWSLAVKDGK-PLEKEWRTEIPIP-RGGPHRACVVVDDRLLVIGGQE 285 (391)
Q Consensus 240 ~~~~~~~~~~d-~~~~~W~~~~~~p-~~~~~~~~~~~~~~i~v~GG~~ 285 (391)
..+.+.+.+.+ .+...|+.+.+.. .... ......++++++....+
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l-~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEIVPEDSSASL-LSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEEECCCSSCEE-EEEEEETTEEEEEEEET
T ss_pred CCCEEEEEeCCCCCccCCeEEecCCCCCeE-EEEEEECCEEEEEEEEC
Confidence 11222222221 1122387764432 2211 23344588888876554
No 181
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.63 E-value=25 Score=31.07 Aligned_cols=21 Identities=19% Similarity=0.218 Sum_probs=13.5
Q ss_pred cCEEEEecCCCCcccceeEeeecCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYH 58 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~ 58 (391)
++.+.+.|+.++ .+..||..+
T Consensus 38 d~~~l~sgs~D~-----~v~iWd~~~ 58 (343)
T 2xzm_R 38 DSPVLISGSRDK-----TVMIWKLYE 58 (343)
T ss_dssp CCCEEEEEETTS-----CEEEEEECS
T ss_pred CCCEEEEEcCCC-----EEEEEECCc
Confidence 566777787666 455666544
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=82.56 E-value=22 Score=30.33 Aligned_cols=93 Identities=10% Similarity=0.049 Sum_probs=48.8
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++++||..... ...+.+||...+.-..+..... .....+++ -+++||+.... ...+.+||+..
T Consensus 88 ~g~l~v~~~~~-----~~~i~~~d~~g~~~~~~~~~~~---~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~~g 151 (286)
T 1q7f_A 88 SGDIIVTERSP-----THQIQIYNQYGQFVRKFGATIL---QHPRGVTVDNKGRIIVVECK--------VMRVIIFDQNG 151 (286)
T ss_dssp TTEEEEEECGG-----GCEEEEECTTSCEEEEECTTTC---SCEEEEEECTTSCEEEEETT--------TTEEEEECTTS
T ss_pred CCeEEEEcCCC-----CCEEEEECCCCcEEEEecCccC---CCceEEEEeCCCCEEEEECC--------CCEEEEEcCCC
Confidence 57899986321 2358889965544333322111 12234444 36789987532 35688999876
Q ss_pred CceEECCCCCCCCCCceEEE-ECCEEEEEcc
Q 016328 200 KKWQDLPPLPVPRYAPATQL-WRGRLHVMGG 229 (391)
Q Consensus 200 ~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG 229 (391)
.....+........-..++. -+++||+...
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 55444321111111122333 3578888754
No 183
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=82.56 E-value=14 Score=36.79 Aligned_cols=58 Identities=7% Similarity=0.056 Sum_probs=33.4
Q ss_pred ceeEEEECCCC---CeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC
Q 016328 138 SHVDIYNFTDN---TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (391)
Q Consensus 138 ~~~~~yd~~~~---~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (391)
..++++|..++ +-..+..... ........-+++.++++. ...++.+|..+.+...+..
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~---~~~~~~~SPDG~~la~~~---------~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEG---FATDAKLSPKGGFVSFIR---------GRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSS---CEEEEEECTTSSEEEEEE---------TTEEEEEETTTTEEEECCC
T ss_pred CcEEEEECCCCCcceEEEcccCCc---ccccccCCCCCCEEEEEe---------CCcEEEEecCCCCEEEecc
Confidence 56999999887 5544433221 111122223555445542 2378999999887776643
No 184
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=82.44 E-value=27 Score=34.20 Aligned_cols=100 Identities=13% Similarity=0.023 Sum_probs=52.4
Q ss_pred CCEEEEEeccCCCCC--CcceeEEEECC-CC---CeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeE
Q 016328 121 KNLLYVFAGYGSIDY--VHSHVDIYNFT-DN---TWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTF 193 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~--~~~~~~~yd~~-~~---~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 193 (391)
+++.+++...+.... ....++++|.. +. +.+.+..-. .......+. -++++|+.+..++ ...++
T Consensus 198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~---~~~~~~~~~spdg~l~~~~~~~~------~~~l~ 268 (662)
T 3azo_A 198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP---EEAIAQAEWAPDGSLIVATDRTG------WWNLH 268 (662)
T ss_dssp TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET---TBCEEEEEECTTSCEEEEECTTS------SCEEE
T ss_pred CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC---CceEcceEECCCCeEEEEECCCC------CeEEE
Confidence 554444444332211 13569999998 56 333332111 112223333 3677777765432 35799
Q ss_pred EEeCCCCceEECCCCCCCC----C---CceEEEE-CCEEEEEcc
Q 016328 194 VLDTETKKWQDLPPLPVPR----Y---APATQLW-RGRLHVMGG 229 (391)
Q Consensus 194 ~yd~~~~~W~~~~~~~~~r----~---~~~~~~~-~~~iyv~GG 229 (391)
++|+.+.+++.+.+..... . ....+.. ++++++.+.
T Consensus 269 ~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 269 RVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp EECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred EEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 9999899998875432211 1 1123333 677776654
No 185
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=81.49 E-value=20 Score=32.58 Aligned_cols=24 Identities=13% Similarity=0.069 Sum_probs=16.3
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCce
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (391)
++++++.|+.+ ..+..||..+.+-
T Consensus 134 dg~~l~s~~~d--------~~i~iwd~~~~~~ 157 (393)
T 1erj_A 134 DGKFLATGAED--------RLIRIWDIENRKI 157 (393)
T ss_dssp TSSEEEEEETT--------SCEEEEETTTTEE
T ss_pred CCCEEEEEcCC--------CeEEEEECCCCcE
Confidence 56777777754 3567889887653
No 186
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=81.06 E-value=21 Score=30.82 Aligned_cols=61 Identities=15% Similarity=0.134 Sum_probs=30.2
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCC--CCceEECCCCCCCCCC-ceEEEE---CCEEEEEccCCCCccCCCccceEe
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTE--TKKWQDLPPLPVPRYA-PATQLW---RGRLHVMGGSGENRYTPEVDHWSL 244 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~ 244 (391)
++.+++.|+.++ .+..||.. ...++.+..+...... .+++.. ++.+++.|+.++ .+..|++
T Consensus 22 ~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSSDQ--------HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEE 88 (351)
T ss_dssp SSSEEEEEETTS--------EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEE
T ss_pred CCCEEEEeeCCC--------eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEec
Confidence 556666776433 45556655 4445544333222222 222222 367777777643 3556664
No 187
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=80.98 E-value=23 Score=32.15 Aligned_cols=24 Identities=4% Similarity=0.025 Sum_probs=16.3
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCce
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (391)
++.+++.|+.+ ..+..||..+...
T Consensus 93 ~~~~l~s~s~d--------g~v~vw~~~~~~~ 116 (402)
T 2aq5_A 93 NDNVIASGSED--------CTVMVWEIPDGGL 116 (402)
T ss_dssp CTTEEEEEETT--------SEEEEEECCTTCC
T ss_pred CCCEEEEEeCC--------CeEEEEEccCCCC
Confidence 56777887753 3577888877643
No 188
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=80.80 E-value=26 Score=30.04 Aligned_cols=57 Identities=5% Similarity=-0.023 Sum_probs=32.3
Q ss_pred cccccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCee
Q 016328 89 PATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG 151 (391)
Q Consensus 89 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~ 151 (391)
...+..+|..+.+..++-.+..+...-.++.+ +++.++.|+.+ ..+.++|..+++-.
T Consensus 44 D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRL 102 (318)
T ss_dssp TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeE
Confidence 34677778877765544333322222222222 55777777764 34888998877543
No 189
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=80.60 E-value=36 Score=31.46 Aligned_cols=95 Identities=6% Similarity=-0.116 Sum_probs=45.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeee--CCCCCCCCCcceEEEEE-eC---CEEEEEeCccCCCCCCCcceeEE
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG--RFDMPREMAHSHLGMVT-DG---RYIYVVTGQYGPQCRGPTAHTFV 194 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~~~~p~~~~r~~~~~~~-~~---~~iyv~GG~~~~~~~~~~~~~~~ 194 (391)
++..+++|+.+ ..++.++..+..... ...+... ...-.+++. -+ +++++.|+.+ ..+..
T Consensus 160 ~~~~l~~~~~~------g~v~~~~~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~~d--------~~i~v 224 (450)
T 2vdu_B 160 DDTTVIIADKF------GDVYSIDINSIPEEKFTQEPILGH-VSMLTDVHLIKDSDGHQFIITSDRD--------EHIKI 224 (450)
T ss_dssp TSSEEEEEETT------SEEEEEETTSCCCSSCCCCCSEEC-SSCEEEEEEEECTTSCEEEEEEETT--------SCEEE
T ss_pred CCCEEEEEeCC------CcEEEEecCCcccccccceeeecc-cCceEEEEEcCCCCCCcEEEEEcCC--------CcEEE
Confidence 45566666542 347888877654432 1112111 111122333 35 7788888754 34677
Q ss_pred EeCCCCceEEC-CCCCCCCCCceEEEECCEEEEEccCC
Q 016328 195 LDTETKKWQDL-PPLPVPRYAPATQLWRGRLHVMGGSG 231 (391)
Q Consensus 195 yd~~~~~W~~~-~~~~~~r~~~~~~~~~~~iyv~GG~~ 231 (391)
||+.+.+.... ..-........+.. ++++++.|+.+
T Consensus 225 wd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d 261 (450)
T 2vdu_B 225 SHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD 261 (450)
T ss_dssp EEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESS
T ss_pred EECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCC
Confidence 88776543221 10011111112223 67777777754
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=79.92 E-value=28 Score=29.88 Aligned_cols=148 Identities=9% Similarity=0.011 Sum_probs=69.3
Q ss_pred CEEEEecCCCCcccceeEeeecCCCCe--eecCCCCCCCCceeeEeecCcccccccccccccccccccCceEEccCCCC-
Q 016328 34 DFFWASSSKFTSSYLNIASNWSPYHNS--IILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPELKWEKMKAAPV- 110 (391)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~- 110 (391)
+.+|+++...+ .+.+||+.++. ...+.. ...+++....+.......-...+..+|+.+.+.+.+.....
T Consensus 40 ~~l~~~~~~~~-----~i~~~~~~~~~~~~~~~~~---~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~ 111 (296)
T 3e5z_A 40 SAVIFSDVRQN-----RTWAWSDDGQLSPEMHPSH---HQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEG 111 (296)
T ss_dssp TEEEEEEGGGT-----EEEEEETTSCEEEEESSCS---SEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETT
T ss_pred CEEEEEeCCCC-----EEEEEECCCCeEEEECCCC---CcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCC
Confidence 34777775333 67889988764 222211 11222222112111111112357788887777765532211
Q ss_pred C---ccCceEEEECCEEEEE----eccC-------CCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEE
Q 016328 111 P---RLDGAAIQIKNLLYVF----AGYG-------SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIY 175 (391)
Q Consensus 111 ~---r~~~~~~~~~~~vyv~----GG~~-------~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iy 175 (391)
. +....+..-++++|+. |... ........+++||+. ++...+..-. ....+++. -+++++
T Consensus 112 ~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 112 KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR----VKPNGLAFLPSGNLL 186 (296)
T ss_dssp EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC----SSEEEEEECTTSCEE
T ss_pred CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC----CCCccEEECCCCCEE
Confidence 1 1111222225688886 4321 011112468999987 5554432111 11223444 355555
Q ss_pred EEeCccCCCCCCCcceeEEEeCC-CCce
Q 016328 176 VVTGQYGPQCRGPTAHTFVLDTE-TKKW 202 (391)
Q Consensus 176 v~GG~~~~~~~~~~~~~~~yd~~-~~~W 202 (391)
+.... ...+++||+. +.+.
T Consensus 187 v~~~~--------~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 187 VSDTG--------DNATHRYCLNARGET 206 (296)
T ss_dssp EEETT--------TTEEEEEEECSSSCE
T ss_pred EEeCC--------CCeEEEEEECCCCcC
Confidence 54321 3578888876 4444
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=79.89 E-value=13 Score=32.65 Aligned_cols=95 Identities=11% Similarity=0.088 Sum_probs=53.0
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++++|+.+..+ ..+.+||+.+++...+...+. ..-.+++. -++++|+....+... ...+++||+++
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~---~~~~~i~~~~dg~l~v~~~~~~~~----~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSHK---ANPAAIKIHKDGRLFVCYLGDFKS----TGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECSS---SSEEEEEECTTSCEEEEECTTSSS----CCEEEEECTTS
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCC---CCcceEEECCCCcEEEEeCCCCCC----CceEEEEeCCC
Confidence 56788876532 358999999988776432111 12234444 367888875432111 35789999998
Q ss_pred CceEE-CCCCCCCCCCceEEE-ECCEEEEEc
Q 016328 200 KKWQD-LPPLPVPRYAPATQL-WRGRLHVMG 228 (391)
Q Consensus 200 ~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~G 228 (391)
...+. +........-..++. -++++|+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 152 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD 152 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEE
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEe
Confidence 87653 222211111122222 256788764
No 192
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=79.74 E-value=51 Score=32.72 Aligned_cols=98 Identities=17% Similarity=0.274 Sum_probs=58.4
Q ss_pred ceEEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCC------CcceEEEEEeCCEEEEEeCccCCCCC
Q 016328 115 GAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREM------AHSHLGMVTDGRYIYVVTGQYGPQCR 186 (391)
Q Consensus 115 ~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~------~r~~~~~~~~~~~iyv~GG~~~~~~~ 186 (391)
.+-++.++.||+.... ..+..+|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 60 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------- 125 (668)
T ss_dssp CCCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------
T ss_pred cCCEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------
Confidence 3346679999998752 358899988764 88743332100 0011235667899987632
Q ss_pred CCcceeEEEeCCCCc--eEECCCCCC--CCCCceEEEECCEEEEEc
Q 016328 187 GPTAHTFVLDTETKK--WQDLPPLPV--PRYAPATQLWRGRLHVMG 228 (391)
Q Consensus 187 ~~~~~~~~yd~~~~~--W~~~~~~~~--~r~~~~~~~~~~~iyv~G 228 (391)
...++.+|.++.+ |+.-..-+. .....+-++.++++|+-.
T Consensus 126 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~ 169 (668)
T 1kv9_A 126 --DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGN 169 (668)
T ss_dssp --TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECC
T ss_pred --CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeC
Confidence 3568899988765 886432111 122233456788887743
No 193
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=79.17 E-value=11 Score=35.77 Aligned_cols=53 Identities=13% Similarity=0.087 Sum_probs=30.1
Q ss_pred EEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEE--C----CCCCCCCCCceEEE--ECCEEEEEccC
Q 016328 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQD--L----PPLPVPRYAPATQL--WRGRLHVMGGS 230 (391)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~--~----~~~~~~r~~~~~~~--~~~~iyv~GG~ 230 (391)
+++..++++|+|=| ...|+++.....+.. + +.+|.. --++.. .++++|+|=|.
T Consensus 267 Ai~~~~ge~y~Fkg----------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~--iDAa~~~~~~g~~~fFKg~ 327 (450)
T 1su3_A 267 AITTIRGEVMFFKD----------RFYMRTNPFYPEVELNFISVFWPQLPNG--LEAAYEFADRDEVRFFKGN 327 (450)
T ss_dssp EEEEETTEEEEEET----------TEEEECCTTSSSCEEEEGGGTCTTSCSS--CCEEEEEGGGTEEEEEETT
T ss_pred eEEecCCeEEEEeC----------CEEEEEcCCCCcccceehhHhccCCCCC--eeEEEEEcCCCeEEEEeCC
Confidence 56678999999965 345666654433321 1 123322 223333 36899999664
No 194
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=78.93 E-value=33 Score=30.03 Aligned_cols=93 Identities=5% Similarity=-0.059 Sum_probs=48.1
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
+.+++.|+.+ ..+.+||..++.......+... ...-.+++.. ++.+++.|+.+ ..+..||..+.
T Consensus 54 g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d--------g~v~iwd~~~~ 118 (368)
T 3mmy_A 54 GNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMH-TGPVLDVCWSDDGSKVFTASCD--------KTAKMWDLSSN 118 (368)
T ss_dssp SEEEEEEETT------SEEEEEEECTTSCEEEEEEEEC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTTT
T ss_pred ceEEEEECCC------CcEEEEEcCCCCceeEEEeccc-cCCEEEEEECcCCCEEEEEcCC--------CcEEEEEcCCC
Confidence 3778887764 3478888876433321112110 1111233332 55666676643 46778998887
Q ss_pred ceEECCCCCCCCCCceEEE---ECCEEEEEccCC
Q 016328 201 KWQDLPPLPVPRYAPATQL---WRGRLHVMGGSG 231 (391)
Q Consensus 201 ~W~~~~~~~~~r~~~~~~~---~~~~iyv~GG~~ 231 (391)
+-..... ....-.++.. -++.+++.|+.+
T Consensus 119 ~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d 150 (368)
T 3mmy_A 119 QAIQIAQ--HDAPVKTIHWIKAPNYSCVMTGSWD 150 (368)
T ss_dssp EEEEEEE--CSSCEEEEEEEECSSCEEEEEEETT
T ss_pred Cceeecc--ccCceEEEEEEeCCCCCEEEEccCC
Confidence 7554322 1111222222 356777777754
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=78.18 E-value=56 Score=32.34 Aligned_cols=236 Identities=10% Similarity=-0.001 Sum_probs=107.2
Q ss_pred cccccccccCceEEccCCCCCccC----ceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcce
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLD----GAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSH 164 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~----~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~ 164 (391)
.+++.+.....|+.+-..+.--.. .....+ +++.+++.-...... ...++++|+.+++......++. ...
T Consensus 95 ~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~-~~~i~v~dl~tg~~~~~~~~~~--~~~- 170 (695)
T 2bkl_A 95 ILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAAD-EAVLHVIDVDSGEWSKVDVIEG--GKY- 170 (695)
T ss_dssp EEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCS-CCEEEEEETTTCCBCSSCCBSC--CTT-
T ss_pred EEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCc-eEEEEEEECCCCCCcCCcccCc--ccc-
Confidence 345555555567666433211111 111122 555555443221111 2469999999988752112222 111
Q ss_pred EEEEE-eCCEEEEEeCccCCCC-----CCCcceeEEEeCCCCce--EECCCCCC-CCCCceEE-EECCEEEEEccCCCCc
Q 016328 165 LGMVT-DGRYIYVVTGQYGPQC-----RGPTAHTFVLDTETKKW--QDLPPLPV-PRYAPATQ-LWRGRLHVMGGSGENR 234 (391)
Q Consensus 165 ~~~~~-~~~~iyv~GG~~~~~~-----~~~~~~~~~yd~~~~~W--~~~~~~~~-~r~~~~~~-~~~~~iyv~GG~~~~~ 234 (391)
..++. -+++.++++..+.... ......+++++..+..- ..+...+. +....... .-+++..++......
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~- 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW- 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-
Confidence 12222 3555555555433210 01145689999987652 22222221 11222222 234554444332210
Q ss_pred cCCCccceEeeeecCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc
Q 016328 235 YTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD 314 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 314 (391)
...+.|.. |..+.+|+.+.+-..... ..+..++.+|+....... ...|+.+|
T Consensus 250 --~~~~l~~~-----~~~~~~~~~l~~~~~~~~--~~~~~~g~l~~~s~~~~~-------------------~~~l~~~d 301 (695)
T 2bkl_A 250 --SENDVYWK-----RPGEKDFRLLVKGVGAKY--EVHAWKDRFYVLTDEGAP-------------------RQRVFEVD 301 (695)
T ss_dssp --TEEEEEEE-----CTTCSSCEEEEECSSCCE--EEEEETTEEEEEECTTCT-------------------TCEEEEEB
T ss_pred --CceEEEEE-----cCCCCceEEeecCCCceE--EEEecCCcEEEEECCCCC-------------------CCEEEEEe
Confidence 12233322 455567776654332222 223356675555432211 23478887
Q ss_pred -CcCc---EEEcCCCCCCCCCceeeEEEECCEEEEEccccCCCCcccceeEecceEEEecC
Q 016328 315 -DEMK---WKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLN 371 (391)
Q Consensus 315 -~~~~---W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~ 371 (391)
.+.. |+.+-+.. +.... ..+...+++|++....+.. ..+|.++++
T Consensus 302 ~~~~~~~~~~~l~~~~-~~~~l-~~~~~~~~~lv~~~~~dg~----------~~l~~~~~~ 350 (695)
T 2bkl_A 302 PAKPARASWKEIVPED-SSASL-LSVSIVGGHLSLEYLKDAT----------SEVRVATLK 350 (695)
T ss_dssp TTBCSGGGCEEEECCC-SSCEE-EEEEEETTEEEEEEEETTE----------EEEEEEETT
T ss_pred CCCCCccCCeEEecCC-CCCeE-EEEEEECCEEEEEEEECCE----------EEEEEEeCC
Confidence 5433 87764321 11111 2234458888887765443 267777764
No 196
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=77.67 E-value=31 Score=32.92 Aligned_cols=91 Identities=9% Similarity=-0.020 Sum_probs=42.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
+++.++.|+.+ ..+.+||...+.-..+..... .-.+++. -++++++.++.+ ..+..||...
T Consensus 396 dg~~l~~~~~d------~~v~~~~~~~~~~~~~~~~~~----~v~~~~~s~d~~~l~~~~~d--------~~v~~w~~~~ 457 (577)
T 2ymu_A 396 DGQTIASASDD------KTVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDDQTIASASDD--------KTVKLWNRNG 457 (577)
T ss_dssp TSSCEEEEETT------SEEEEECTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETT--------SEEEEEETTS
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCEEEEecCCCC----CeEEEEECCCCCEEEEEcCC--------CEEEEEECCC
Confidence 45666666654 247778854433222221111 1122333 356666666543 3466778655
Q ss_pred CceEECCCCCCCCCCceEE-EECCEEEEEccCC
Q 016328 200 KKWQDLPPLPVPRYAPATQ-LWRGRLHVMGGSG 231 (391)
Q Consensus 200 ~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~ 231 (391)
..-..+..-. ..-.+++ .-++++++.|+.+
T Consensus 458 ~~~~~~~~~~--~~v~~~~~spd~~~las~~~d 488 (577)
T 2ymu_A 458 QLLQTLTGHS--SSVRGVAFSPDGQTIASASDD 488 (577)
T ss_dssp CEEEEEECCS--SCEEEEEECTTSCEEEEEETT
T ss_pred CEEEEEcCCC--CCEEEEEEcCCCCEEEEEeCC
Confidence 4333332111 1111222 2366777777643
No 197
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=77.27 E-value=58 Score=32.04 Aligned_cols=18 Identities=17% Similarity=-0.051 Sum_probs=13.7
Q ss_pred cceeEEEeCCCCceEECC
Q 016328 189 TAHTFVLDTETKKWQDLP 206 (391)
Q Consensus 189 ~~~~~~yd~~~~~W~~~~ 206 (391)
...++.+|..+.+-..+.
T Consensus 234 ~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp EEEEEEEETTTTEEEECC
T ss_pred eeEEEEEECCCCceEeec
Confidence 467899999988766554
No 198
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=77.11 E-value=23 Score=34.11 Aligned_cols=98 Identities=11% Similarity=-0.043 Sum_probs=53.7
Q ss_pred cccccccCceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eC
Q 016328 93 QDLPAPELKWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DG 171 (391)
Q Consensus 93 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~ 171 (391)
..||..+.+-+.+...+. ...+..-+++.++++..+..+ ...++++|+.+.+++.+..-+. . ....+. -|
T Consensus 135 ~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~--~~~i~~~d~~~g~~~~l~~~~~--~--~~~~~~SpD 205 (582)
T 3o4h_A 135 ALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGG--RVSLFTSNLSSGGLRVFDSGEG--S--FSSASISPG 205 (582)
T ss_dssp EEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETT--EEEEEEEETTTCCCEEECCSSC--E--EEEEEECTT
T ss_pred eEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCC--CeEEEEEcCCCCCceEeecCCC--c--cccceECCC
Confidence 356776666555543332 112223356555555544322 1349999999999887643322 1 122222 25
Q ss_pred CEEEEEeCccCCCCCCCcceeEEEeCCCCceEEC
Q 016328 172 RYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (391)
Q Consensus 172 ~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~ 205 (391)
++.++.+..++ ...++++|+++.+.+.+
T Consensus 206 G~~l~~~~~~~------~~~i~~~d~~~~~~~~~ 233 (582)
T 3o4h_A 206 MKVTAGLETAR------EARLVTVDPRDGSVEDL 233 (582)
T ss_dssp SCEEEEEECSS------CEEEEEECTTTCCEEEC
T ss_pred CCEEEEccCCC------eeEEEEEcCCCCcEEEc
Confidence 54444433222 36799999999887743
No 199
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=76.30 E-value=70 Score=32.48 Aligned_cols=199 Identities=11% Similarity=0.105 Sum_probs=95.3
Q ss_pred ccccccccCceEEccCCCC-----CccCceEEEEC---CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCC-CCCC---
Q 016328 92 FQDLPAPELKWEKMKAAPV-----PRLDGAAIQIK---NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD-MPRE--- 159 (391)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~-----~r~~~~~~~~~---~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~--- 159 (391)
+++-+-...+|+++...+. .+.-+++++.. +.+|+..|....... ..+++=+-.-.+|+.+.. ++.+
T Consensus 39 v~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~-~~v~~S~DgG~TW~~~~~~~~~~~~~ 117 (789)
T 1sqj_A 39 AYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW-AAFYVSEDRGQSFTIYESPFPMGAND 117 (789)
T ss_dssp EEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC-CEEEEESSTTSEEEEEECSSCCCTTS
T ss_pred EEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc-cEEEEECCCCCcceeccCCcccCccC
Confidence 4444445568999865332 12233444332 478887764221111 334444445568998742 1110
Q ss_pred CCc-ceEEEEEe---CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCC---CCCCceEEEE----CCEEEEEc
Q 016328 160 MAH-SHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPV---PRYAPATQLW----RGRLHVMG 228 (391)
Q Consensus 160 ~~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~---~r~~~~~~~~----~~~iyv~G 228 (391)
..| ....+++. .+.+|+ |.. ...+++=+-.-++|+.+..++. .-.......+ .+.||+..
T Consensus 118 ~~~~~~~~iav~p~~~~~v~~-g~~--------~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 188 (789)
T 1sqj_A 118 MGRNNGERLAVNPFNSNEVWM-GTR--------TEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASA 188 (789)
T ss_dssp TTTTSCCCEEEETTEEEEEEE-ECS--------SSCEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEE
T ss_pred CCccceeEEEEcCCCCCEEEE-Eec--------cCCEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEE
Confidence 012 11234443 356666 331 1335555555678999876441 1122222332 24677754
Q ss_pred cCCCCccCCCccceEeeeecCCcccCCceeecCCCCCC-------c---------ceeEEEE--CCEEEEEeCCCCCCCc
Q 016328 229 GSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGG-------P---------HRACVVV--DDRLLVIGGQEGDFMA 290 (391)
Q Consensus 229 G~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~-------~---------~~~~~~~--~~~i~v~GG~~~~~~~ 290 (391)
... ...|.- ...-.+|+.+..+|... . .+.+++. ++.||+..+......
T Consensus 189 ~~~-------~~v~~S-----~DgG~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~- 255 (789)
T 1sqj_A 189 TAP-------QGMYVT-----HDGGVSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPW- 255 (789)
T ss_dssp SST-------TCEEEE-----SSTTSSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSS-
T ss_pred cCC-------CeEEEE-----cCCCcCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCCCCC-
Confidence 321 111211 13456788776555432 0 0222222 788888743211000
Q ss_pred CCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCC
Q 016328 291 KPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMP 326 (391)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~ 326 (391)
......+|+.+ ...+|+.+.+.+
T Consensus 256 -------------~g~~g~l~~S~DgG~tW~~~~~~~ 279 (789)
T 1sqj_A 256 -------------GVTFGEVWRQNRTSGAWDDITPRV 279 (789)
T ss_dssp -------------CCCCCCEEEEETTTCCEEECCCCT
T ss_pred -------------CCCCceEEEEeCCCCceEECcCCC
Confidence 00122478776 788999997644
No 200
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=76.28 E-value=26 Score=34.85 Aligned_cols=79 Identities=11% Similarity=0.063 Sum_probs=46.0
Q ss_pred EEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEE
Q 016328 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFV 194 (391)
Q Consensus 117 ~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 194 (391)
.++.+++||+... ...+..+|..+.+ |+.-..-+........+-++.++.+|+..+..... ....++.
T Consensus 113 ~~~~~~~v~v~~~-------dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~---~~g~v~a 182 (668)
T 1kv9_A 113 VALWGDKVYVGTL-------DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYG---VRGFVSA 182 (668)
T ss_dssp CEEEBTEEEEECT-------TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTC---CBCEEEE
T ss_pred eEEECCEEEEEcC-------CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcC---CCCEEEE
Confidence 3556889888642 2358999998775 88743211110112223456788888743221111 1467899
Q ss_pred EeCCCCc--eEEC
Q 016328 195 LDTETKK--WQDL 205 (391)
Q Consensus 195 yd~~~~~--W~~~ 205 (391)
||+++.+ |+.-
T Consensus 183 ~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 183 YDADTGKLAWRFY 195 (668)
T ss_dssp EETTTCCEEEEEE
T ss_pred EECCCCcEEEEec
Confidence 9998765 8753
No 201
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=75.90 E-value=34 Score=34.21 Aligned_cols=79 Identities=13% Similarity=0.055 Sum_probs=46.2
Q ss_pred EEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCC-CCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeE
Q 016328 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFD-MPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTF 193 (391)
Q Consensus 117 ~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~-~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 193 (391)
.++.+++||+... ...+..+|..+.+ |+.-.. -+........+-++.++.+|+-.+..... ....++
T Consensus 117 ~~~~~g~v~v~~~-------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~---~~g~v~ 186 (689)
T 1yiq_A 117 VAVWKGKVYVGVL-------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFG---VRGYVT 186 (689)
T ss_dssp CEEETTEEEEECT-------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTC---CBCEEE
T ss_pred cEEECCEEEEEcc-------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccC---CCCEEE
Confidence 4567889888642 2458999998775 887432 11100111223456789888743221111 146789
Q ss_pred EEeCCCCc--eEEC
Q 016328 194 VLDTETKK--WQDL 205 (391)
Q Consensus 194 ~yd~~~~~--W~~~ 205 (391)
.||++|.+ |+.-
T Consensus 187 a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 187 AYDAETGKEAWRFY 200 (689)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEec
Confidence 99998875 8753
No 202
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=75.76 E-value=71 Score=32.27 Aligned_cols=111 Identities=14% Similarity=0.164 Sum_probs=54.4
Q ss_pred ccccccccCceEEccC-C-----CC---CccCceEEEE----CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCC-CC
Q 016328 92 FQDLPAPELKWEKMKA-A-----PV---PRLDGAAIQI----KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFD-MP 157 (391)
Q Consensus 92 ~~~~d~~~~~W~~~~~-~-----p~---~r~~~~~~~~----~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p 157 (391)
+++-.-...+|+++.. + +. .........+ .+.+|+..|.-........+++=+-.-.+|+++.. .+
T Consensus 45 v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~ 124 (763)
T 3a0f_A 45 TYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVP 124 (763)
T ss_dssp EEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSC
T ss_pred EEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCCCCCceeccCCcc
Confidence 3444445568998865 3 21 1222222333 25889876631111111224443334568998742 11
Q ss_pred CC---CCcce-EEEEEe---CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCC
Q 016328 158 RE---MAHSH-LGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVP 211 (391)
Q Consensus 158 ~~---~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 211 (391)
.+ ..|.. ..+++. .+.+|+.+- ...+++=+-.-.+|+.+..++..
T Consensus 125 ~~~~~~g~~~~~~l~v~p~~~~~v~a~~~---------~~~l~~S~DgG~TW~~~~~~~~~ 176 (763)
T 3a0f_A 125 MGANDMGRNGGERLAVNPHWTDELWFGSR---------TQGLWRSTDRAQTWSRMNQLPDS 176 (763)
T ss_dssp CCTTSTTTTSBCCEEECTTSTTCEEEECS---------SSCEEEESSTTSSCEECTTSCCC
T ss_pred cCccccCccccceEEECCCCCCEEEEEeC---------CCcEEEECCCCcCccccccCccc
Confidence 10 11211 234443 367887531 13455545556799999876643
No 203
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=75.75 E-value=13 Score=32.29 Aligned_cols=107 Identities=10% Similarity=0.112 Sum_probs=49.6
Q ss_pred cccccccccCceEEccCCCCCc-cCceEEEE-CC-EEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCC--CcceE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPR-LDGAAIQI-KN-LLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREM--AHSHL 165 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r-~~~~~~~~-~~-~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~--~r~~~ 165 (391)
.+..+|..+.+-...-.++... .-+.++.- ++ .+|+.+.. ...+.++|+.+.+-...-..+.+. .....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 5667777665433222222210 11223322 33 78887643 245899999887654321121100 00111
Q ss_pred EEEEe--CCEEEEEeCccCCCCCC---CcceeEEEeCCCCceE
Q 016328 166 GMVTD--GRYIYVVTGQYGPQCRG---PTAHTFVLDTETKKWQ 203 (391)
Q Consensus 166 ~~~~~--~~~iyv~GG~~~~~~~~---~~~~~~~yd~~~~~W~ 203 (391)
.++.. ++.||+.....+..... ....+.+||+.+.+..
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 23332 44777764211000000 1367899999877643
No 204
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=75.52 E-value=62 Score=31.42 Aligned_cols=26 Identities=8% Similarity=0.116 Sum_probs=17.2
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeee
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG 152 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 152 (391)
+++.++.|+.++ .+.++|..+.+-..
T Consensus 335 dg~~l~s~s~D~------~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 335 DGKTLFSADAEG------HINSWDISTGISNR 360 (611)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCC------cEEEEECCCCceee
Confidence 456666676542 47888988776544
No 205
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=75.46 E-value=42 Score=29.54 Aligned_cols=67 Identities=7% Similarity=-0.002 Sum_probs=33.2
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCe-----eeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEE
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTW-----GGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFV 194 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W-----~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 194 (391)
++.+++.|+.+. .+.+||..+..- .....+... ...-.+++. -++.+++.|+.+ ..+..
T Consensus 38 d~~~l~sgs~D~------~v~iWd~~~~~~~~~~~~~~~~l~~h-~~~V~~~~~~~~~~~l~s~s~D--------~~v~l 102 (343)
T 2xzm_R 38 DSPVLISGSRDK------TVMIWKLYEEEQNGYFGIPHKALTGH-NHFVSDLALSQENCFAISSSWD--------KTLRL 102 (343)
T ss_dssp CCCEEEEEETTS------CEEEEEECSSCCSSBSEEEEEEECCC-SSCEEEEEECSSTTEEEEEETT--------SEEEE
T ss_pred CCCEEEEEcCCC------EEEEEECCcCCcccccccccchhccC-CCceEEEEECCCCCEEEEEcCC--------CcEEE
Confidence 456777777652 366677654321 011111110 111122333 245666677653 45778
Q ss_pred EeCCCCce
Q 016328 195 LDTETKKW 202 (391)
Q Consensus 195 yd~~~~~W 202 (391)
||..+.+.
T Consensus 103 wd~~~~~~ 110 (343)
T 2xzm_R 103 WDLRTGTT 110 (343)
T ss_dssp EETTSSCE
T ss_pred EECCCCcE
Confidence 88877653
No 206
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=74.65 E-value=35 Score=33.80 Aligned_cols=65 Identities=11% Similarity=0.077 Sum_probs=33.1
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCC--eee-CCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGG-RFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~-~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
..+++.|+.+ ..+.+||+.++. +.. ...+... ...-.+++. .++++++.|+.+ ..+..||.
T Consensus 395 ~~~l~s~s~D------~~i~~W~~~~~~~~~~~~~~~~~~h-~~~v~~v~~s~~g~~l~sgs~D--------g~v~vwd~ 459 (694)
T 3dm0_A 395 ADIIVSASRD------KSIILWKLTKDDKAYGVAQRRLTGH-SHFVEDVVLSSDGQFALSGSWD--------GELRLWDL 459 (694)
T ss_dssp CSEEEEEETT------SEEEEEECCCSTTCSCEEEEEEECC-SSCEEEEEECTTSSEEEEEETT--------SEEEEEET
T ss_pred CCEEEEEeCC------CcEEEEEccCCCcccccccceecCC-CCcEEEEEECCCCCEEEEEeCC--------CcEEEEEC
Confidence 3577777764 347778776542 111 0011110 111122333 356777777754 45778888
Q ss_pred CCCc
Q 016328 198 ETKK 201 (391)
Q Consensus 198 ~~~~ 201 (391)
.+.+
T Consensus 460 ~~~~ 463 (694)
T 3dm0_A 460 AAGV 463 (694)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 7654
No 207
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=74.46 E-value=42 Score=29.01 Aligned_cols=95 Identities=11% Similarity=-0.037 Sum_probs=43.7
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCCeee---CCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG---RFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~---~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
+++++.||.+. .+.++|+.+.+-.. ...+... ...-.+++. .++++++.|+.++ .+..++.
T Consensus 51 ~~~l~S~s~D~------~i~vWd~~~~~~~~~~~~~~l~~h-~~~V~~~~~s~dg~~l~s~~~d~--------~i~~~~~ 115 (340)
T 4aow_A 51 PDMILSASRDK------TIIMWKLTRDETNYGIPQRALRGH-SHFVSDVVISSDGQFALSGSWDG--------TLRLWDL 115 (340)
T ss_dssp TTEEEEEETTS------CEEEEEECCSSSCSEEEEEEECCC-SSCEEEEEECTTSSEEEEEETTS--------EEEEEET
T ss_pred CCEEEEEcCCC------eEEEEECCCCCcccceeeEEEeCC-CCCEEEEEECCCCCEEEEEcccc--------cceEEee
Confidence 46777887653 36677766543221 1111110 111122222 3566777776543 4566777
Q ss_pred CCCceEECCCCCCCCCCceEEEECCEEEEEccCC
Q 016328 198 ETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (391)
Q Consensus 198 ~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 231 (391)
........................+..++.|+.+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 149 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD 149 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred cccceeeeecCCCCceeEEEEeecCccceeecCC
Confidence 6665443322222221112222344555666543
No 208
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=74.37 E-value=37 Score=30.94 Aligned_cols=27 Identities=11% Similarity=0.160 Sum_probs=19.7
Q ss_pred EEE-CCEEEEEccccCCCCcccceeEecceEEEecCcccccc
Q 016328 337 VLV-NNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLVSAF 377 (391)
Q Consensus 337 ~~~-~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 377 (391)
... ++++|+|=|. ..|+||..+.+..+
T Consensus 328 ~~~~~g~~YfFkg~--------------~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 328 FYSKNKYYYFFQGS--------------NQFEYDFLLQRITK 355 (365)
T ss_dssp EEETTTEEEEEETT--------------EEEEEETTTTEEEE
T ss_pred eEecCCcEEEEeCC--------------EEEEEECCccEEec
Confidence 444 8899998773 58899987776444
No 209
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=74.36 E-value=66 Score=31.23 Aligned_cols=81 Identities=16% Similarity=0.116 Sum_probs=43.7
Q ss_pred ceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCCCCceE---EC-CCCCCC
Q 016328 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQ---DL-PPLPVP 211 (391)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~---~~-~~~~~~ 211 (391)
..+++.|..+.....+..++. .+..|..... +.++|+.... .+.+..+|.++.+=. .+ ...|.|
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~--~~~~~d~~~~pdgr~~~va~~~--------sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISA--ERFLHDGGLDGSHRYFITAANA--------RNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEEC--CSSEEEEEECTTSCEEEEEEGG--------GTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred CeEEEEecCCCccceeeeeec--cccccCceECCCCCEEEEEeCC--------CCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 458888887765544444433 3444444442 3456665321 577889999987633 22 334444
Q ss_pred CCCceEEEE-CCEEEEEc
Q 016328 212 RYAPATQLW-RGRLHVMG 228 (391)
Q Consensus 212 r~~~~~~~~-~~~iyv~G 228 (391)
..+.....- .+.+|+.+
T Consensus 390 g~g~~~~~p~~g~v~~t~ 407 (567)
T 1qks_A 390 GRGANFVHPTFGPVWATS 407 (567)
T ss_dssp TTCEEEEETTTEEEEEEE
T ss_pred ccceeeECCCCCcEEEeC
Confidence 333332222 35677765
No 210
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=73.48 E-value=29 Score=34.71 Aligned_cols=97 Identities=15% Similarity=0.179 Sum_probs=57.8
Q ss_pred eEEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCC------CcceEEEEEeCCEEEEEeCccCCCCCC
Q 016328 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREM------AHSHLGMVTDGRYIYVVTGQYGPQCRG 187 (391)
Q Consensus 116 ~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~------~r~~~~~~~~~~~iyv~GG~~~~~~~~ 187 (391)
+-++.++.||+.... ..+..+|..+.+ |+.-...+... .....+.++.+++||+...
T Consensus 65 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------- 129 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------- 129 (689)
T ss_dssp CCEEETTEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------
T ss_pred cCEEECCEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------
Confidence 345679999997642 358999988764 88743332100 0011235678899988642
Q ss_pred CcceeEEEeCCCCc--eEECCC-CCC--CCCCceEEEECCEEEEEc
Q 016328 188 PTAHTFVLDTETKK--WQDLPP-LPV--PRYAPATQLWRGRLHVMG 228 (391)
Q Consensus 188 ~~~~~~~yd~~~~~--W~~~~~-~~~--~r~~~~~~~~~~~iyv~G 228 (391)
...++.+|.+|.+ |+.-.. -+. .....+-++.++.+|+-.
T Consensus 130 -dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~ 174 (689)
T 1yiq_A 130 -DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGN 174 (689)
T ss_dssp -TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECC
T ss_pred -CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEe
Confidence 3568899988765 876442 111 112223456788887743
No 211
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=71.71 E-value=24 Score=32.53 Aligned_cols=20 Identities=15% Similarity=0.227 Sum_probs=12.9
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCC
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTD 147 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~ 147 (391)
+.+++.|+.++ .+.+||..+
T Consensus 141 ~~~lat~~~dg------~V~vwd~~~ 160 (430)
T 2xyi_A 141 ACVIATKTPSS------DVLVFDYTK 160 (430)
T ss_dssp EEEEEEECSSS------CEEEEEGGG
T ss_pred CcEEEEECCCC------cEEEEECCC
Confidence 46777776542 478888765
No 212
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=71.65 E-value=67 Score=30.29 Aligned_cols=48 Identities=19% Similarity=0.342 Sum_probs=33.4
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEEC--CCCCCCCCCceEEEECCEEEEEccCC
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL--PPLPVPRYAPATQLWRGRLHVMGGSG 231 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~r~~~~~~~~~~~iyv~GG~~ 231 (391)
++++|+|-| +..|+||..+++...- +.+| . .-++...++++|+|=|..
T Consensus 158 ~~~~yfFkG----------~~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~~ 207 (460)
T 1qhu_A 158 DEGILFFQG----------NRKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGNQ 207 (460)
T ss_dssp SSEEEEEET----------TEEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETTE
T ss_pred CCeEEEEec----------ccEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECCE
Confidence 678898866 5679999988765432 2232 2 345666789999998864
No 213
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=71.59 E-value=45 Score=28.81 Aligned_cols=81 Identities=16% Similarity=0.207 Sum_probs=40.7
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCC-CeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCC-
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN-TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTE- 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~- 198 (391)
++.||+.. .+ +.+||+..+ .|+... +.+ .. ...++.++.||+... ...+++||+.
T Consensus 70 ~g~l~v~t--------~~-l~~~d~~g~~~~~~~~--~~~-~~--~~~~~~~~~l~v~t~---------~~~l~~~d~~g 126 (330)
T 3hxj_A 70 DGTIYFGS--------DK-VYAINPDGTEKWRFDT--KKA-IV--SDFTIFEDILYVTSM---------DGHLYAINTDG 126 (330)
T ss_dssp TTEECCSS--------CE-EEEECCCGGGGGGSCC----------CCEEEETTEEEEECT---------TSEEEEECTTS
T ss_pred CCcEEEec--------Cc-EEEECCCCcEEEEEEC--CCC-cc--cCceEECCEEEEEec---------CCEEEEEcCCC
Confidence 56777632 12 888987433 355421 111 11 122334888887531 2468889987
Q ss_pred CCceEECCCCCCCCCCceEEEE-CCEEEEE
Q 016328 199 TKKWQDLPPLPVPRYAPATQLW-RGRLHVM 227 (391)
Q Consensus 199 ~~~W~~~~~~~~~r~~~~~~~~-~~~iyv~ 227 (391)
...|+...+.+ . ..+.+.. ++.||+.
T Consensus 127 ~~~~~~~~~~~--~-~~~~~~~~~g~l~vg 153 (330)
T 3hxj_A 127 TEKWRFKTKKA--I-YATPIVSEDGTIYVG 153 (330)
T ss_dssp CEEEEEECSSC--C-CSCCEECTTSCEEEE
T ss_pred CEEEEEcCCCc--e-eeeeEEcCCCEEEEE
Confidence 34576543222 1 1222333 6677764
No 214
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=71.45 E-value=53 Score=28.83 Aligned_cols=168 Identities=11% Similarity=0.042 Sum_probs=81.1
Q ss_pred eeEeeecCCCCe-e-ecCCCCCCCCceeeEeecCcccccccccccccccccccC--ceEEccCC------CCCccCc-eE
Q 016328 49 NIASNWSPYHNS-I-ILPNNGPQKGENIGVKTKKDVVPKRILPATFQDLPAPEL--KWEKMKAA------PVPRLDG-AA 117 (391)
Q Consensus 49 ~~~~~~d~~~~~-~-~lp~~~~r~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~------p~~r~~~-~~ 117 (391)
+.+..||+.+++ . ......-....++++...+...-.......+..||+... .-..+... ....... .+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 368889998777 2 222111122234444322211111122345777776554 11222211 1111122 33
Q ss_pred EEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCC-------CCCCCcceEEEEEe-C-CEEEEEeCccCCCCC
Q 016328 118 IQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDM-------PREMAHSHLGMVTD-G-RYIYVVTGQYGPQCR 186 (391)
Q Consensus 118 ~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-------p~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~ 186 (391)
++. ++.|||..+.. ...+.+||+....-..+... +..+ ....++++. + +.|||....
T Consensus 149 a~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~-~~p~gia~d~~~g~l~v~d~~------ 216 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQF-SVPHSLALVPHLDQLCVADRE------ 216 (329)
T ss_dssp EECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEE-SCEEEEEEETTTTEEEEEETT------
T ss_pred EEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCccc-CCCcEEEEECCCCEEEEEECC------
Confidence 333 57899997521 24588999655433333211 1111 123455554 4 899998642
Q ss_pred CCcceeEEEeCCCCceEEC-CCCCCCCCCceEEEECCEEEEEccC
Q 016328 187 GPTAHTFVLDTETKKWQDL-PPLPVPRYAPATQLWRGRLHVMGGS 230 (391)
Q Consensus 187 ~~~~~~~~yd~~~~~W~~~-~~~~~~r~~~~~~~~~~~iyv~GG~ 230 (391)
...+.+||+++.+.... ..........+++...+.+|+..|.
T Consensus 217 --~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 217 --NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp --TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred --CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence 46789999986655432 2111222222344445777777664
No 215
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=71.38 E-value=46 Score=28.10 Aligned_cols=178 Identities=9% Similarity=-0.005 Sum_probs=88.3
Q ss_pred HHhhee--cCEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEee-cCcccccccccccccccccccCce
Q 016328 27 LGFALV--ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKT-KKDVVPKRILPATFQDLPAPELKW 102 (391)
Q Consensus 27 ~~~~~~--~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~-~~~~~~~~~~~~~~~~~d~~~~~W 102 (391)
|+.++- ++.||+.-... +.+.++|+.... ..+.........++++-. ++...-.......+..+++....-
T Consensus 39 ~gi~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDISE-----PSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEETTTTEEEEEETTT-----TEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred EEEEEecCCCEEEEEECCC-----CEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 455553 57888886422 367888887765 222221112223444432 121111112233566666654332
Q ss_pred EEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEe
Q 016328 103 EKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVT 178 (391)
Q Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~G 178 (391)
+.+......+. ..+++- +++||+.-... ....+++++++...-+.+..... ....++++. +++||+.-
T Consensus 114 ~~~~~~~~~~P-~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~~---~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 114 RVLFDTGLVNP-RGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDNL---GLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp EEEECSSCSSE-EEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECTTC---SCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCc-cEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEECCC---CCCcEEEEcCCCCEEEEEE
Confidence 22221111111 233333 57999975321 12458888887654333321111 123345553 57999984
Q ss_pred CccCCCCCCCcceeEEEeCCCCceEEC-CCCCCCCCCceEEEECCEEEEEc
Q 016328 179 GQYGPQCRGPTAHTFVLDTETKKWQDL-PPLPVPRYAPATQLWRGRLHVMG 228 (391)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~r~~~~~~~~~~~iyv~G 228 (391)
-. .+.+.++|+....-..+ ..+..| ..++..++.||+.-
T Consensus 186 ~~--------~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~ 225 (267)
T 1npe_A 186 AG--------THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTD 225 (267)
T ss_dssp TT--------TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEE
T ss_pred CC--------CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEE
Confidence 31 46789999976432222 222223 34566688999974
No 216
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=70.66 E-value=73 Score=30.16 Aligned_cols=63 Identities=8% Similarity=-0.017 Sum_probs=32.0
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~ 199 (391)
++..++.++.++ .+.++|.....-..+..... .-.+++. .+++.++.|+.+ ..+..||...
T Consensus 314 ~~~~l~t~~~d~------~i~~w~~~~~~~~~~~~~~~----~v~~~~~s~~g~~l~~~~~d--------g~v~~~~~~~ 375 (577)
T 2ymu_A 314 DGQTIASASDDK------TVKLWNRNGQHLQTLTGHSS----SVWGVAFSPDGQTIASASDD--------KTVKLWNRNG 375 (577)
T ss_dssp TSSEEEEEETTS------CEEEEETTSCEEEEECCCSS----CEEEEEECTTSSEEEEEETT--------SEEEEEETTC
T ss_pred CCCEEEEEeCCC------eEEEEeCCCCeeEEEeCCCC----CEEEEEECCCCCEEEEEeCC--------CEEEEEcCCC
Confidence 455666666432 36677876654444322211 1223333 356666776643 3456777654
Q ss_pred Cc
Q 016328 200 KK 201 (391)
Q Consensus 200 ~~ 201 (391)
..
T Consensus 376 ~~ 377 (577)
T 2ymu_A 376 QL 377 (577)
T ss_dssp CE
T ss_pred CE
Confidence 43
No 217
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=70.07 E-value=26 Score=30.72 Aligned_cols=58 Identities=7% Similarity=0.063 Sum_probs=29.7
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCceE-ECCCCCCCCCCceEEE-ECCEEEEEccCCCCccCCCccceE
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQ-DLPPLPVPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
++..++.|+.+ ..+..||..+.+-. .+.. ....-.++.. -++.+++.|+.+. .+..|+
T Consensus 76 dg~~l~s~s~D--------~~v~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D~-----~i~vwd 135 (319)
T 3frx_A 76 DGAYALSASWD--------KTLRLWDVATGETYQRFVG--HKSDVMSVDIDKKASMIISGSRDK-----TIKVWT 135 (319)
T ss_dssp TSSEEEEEETT--------SEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSCEEEEEETTS-----CEEEEE
T ss_pred CCCEEEEEeCC--------CEEEEEECCCCCeeEEEcc--CCCcEEEEEEcCCCCEEEEEeCCC-----eEEEEE
Confidence 56667777653 45778898876522 1111 0111111222 2566777777643 355665
No 218
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=69.95 E-value=65 Score=29.48 Aligned_cols=64 Identities=8% Similarity=0.066 Sum_probs=34.2
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCC-eeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
++.+++.|+.+ ..+.+||+.+.. .+.+..+... ...-.+++.. +..+++.|+.+ ..+..||.
T Consensus 243 ~~~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~~l~tg~~d--------g~v~vwd~ 307 (430)
T 2xyi_A 243 HESLFGSVADD------QKLMIWDTRNNNTSKPSHTVDAH-TAEVNCLSFNPYSEFILATGSAD--------KTVALWDL 307 (430)
T ss_dssp CTTEEEEEETT------SEEEEEETTCSCSSSCSEEEECC-SSCEEEEEECSSCTTEEEEEETT--------SEEEEEET
T ss_pred CCCEEEEEeCC------CeEEEEECCCCCCCcceeEeecC-CCCeEEEEeCCCCCCEEEEEeCC--------CeEEEEeC
Confidence 45677777653 458899998653 1211111110 1111233332 33578888753 45778888
Q ss_pred CC
Q 016328 198 ET 199 (391)
Q Consensus 198 ~~ 199 (391)
.+
T Consensus 308 ~~ 309 (430)
T 2xyi_A 308 RN 309 (430)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 219
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=69.01 E-value=58 Score=28.38 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=43.9
Q ss_pred eEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCC--CCCcceEEEEEe--CCEEEEEeCccCCCC----
Q 016328 116 AAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR--EMAHSHLGMVTD--GRYIYVVTGQYGPQC---- 185 (391)
Q Consensus 116 ~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~~~r~~~~~~~~--~~~iyv~GG~~~~~~---- 185 (391)
+++.. ++.|||.-.. ..+.+||+.+++.+.+..... +. .....+++. ++.||+.-.......
T Consensus 84 gi~~~~~~g~l~v~d~~-------~~i~~~d~~~g~~~~~~~~~~~~~~-~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~ 155 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDCY-------YHLSVVGSEGGHATQLATSVDGVPF-KWLYAVTVDQRTGIVYFTDVSTLYDDRGVQ 155 (322)
T ss_dssp EEEEETTTTEEEEEETT-------TEEEEECTTCEECEEEESEETTEEC-SCEEEEEECTTTCCEEEEESCSSCCTTCHH
T ss_pred eEEEcCCCCcEEEEECC-------CCEEEEeCCCCEEEEecccCCCCcc-cccceEEEecCCCEEEEECCcccccccccc
Confidence 44444 5789987432 237888988766555432111 11 122344443 578998742211000
Q ss_pred -----CCCcceeEEEeCCCCceEEC
Q 016328 186 -----RGPTAHTFVLDTETKKWQDL 205 (391)
Q Consensus 186 -----~~~~~~~~~yd~~~~~W~~~ 205 (391)
......+++||+.+.+.+.+
T Consensus 156 ~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 156 QIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp HHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred eehcccCCCceEEEEeCCCCEEEEe
Confidence 01135799999988776543
No 220
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=68.86 E-value=95 Score=30.74 Aligned_cols=86 Identities=13% Similarity=0.069 Sum_probs=49.6
Q ss_pred cceeEEEECCC------C--CeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCC---ceEEC
Q 016328 137 HSHVDIYNFTD------N--TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK---KWQDL 205 (391)
Q Consensus 137 ~~~~~~yd~~~------~--~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~---~W~~~ 205 (391)
.+.++++|..+ . .++.+..-.. . ........++.||+.+..++ ....++.+|+.+. .|+.+
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~--~-~~~~~s~dg~~l~~~s~~~~-----~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFE--G-EYDYVTNEGTVFTFKTNRHS-----PNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSS--S-CEEEEEEETTEEEEEECTTC-----TTCEEEEEETTSCCGGGCEEE
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCC--c-EEEEEeccCCEEEEEECCCC-----CCCEEEEEeCCCCCcccceec
Confidence 35689999876 4 5776643222 1 12234456788888875432 1467899998875 48876
Q ss_pred CCCCCCCCCceEEEE-CCEEEEEccC
Q 016328 206 PPLPVPRYAPATQLW-RGRLHVMGGS 230 (391)
Q Consensus 206 ~~~~~~r~~~~~~~~-~~~iyv~GG~ 230 (391)
-+-........+... ++.|++....
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEE
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEE
Confidence 432221122233445 6777776543
No 221
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=68.21 E-value=18 Score=35.27 Aligned_cols=59 Identities=14% Similarity=0.123 Sum_probs=35.2
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
++.+||.... .+.+.++|..+++-.. .++.+ ...|.+++. +..+|+.+. ...+..||+.
T Consensus 166 ~~~~~V~~~~------~~~V~viD~~t~~v~~--~i~~g--~~p~~v~~SpDGr~lyv~~~---------dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRD------AGQIALIDGSTYEIKT--VLDTG--YAVHISRLSASGRYLFVIGR---------DGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETT------TTEEEEEETTTCCEEE--EEECS--SCEEEEEECTTSCEEEEEET---------TSEEEEEETT
T ss_pred CceEEEEeCC------CCeEEEEECCCCeEEE--EEeCC--CCccceEECCCCCEEEEEcC---------CCeEEEEECC
Confidence 4577877643 3469999998875443 22221 122344442 457887642 3568999995
No 222
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=66.85 E-value=54 Score=27.14 Aligned_cols=94 Identities=12% Similarity=0.158 Sum_probs=48.9
Q ss_pred eEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeee--C----CCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCCCC
Q 016328 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG--R----FDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCRGP 188 (391)
Q Consensus 116 ~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~----~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 188 (391)
+++.+++.+|+|=|. .+|+++.....+.. + +.||. ....+.... ++++|+|=|
T Consensus 28 Ai~~~~g~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~---~iDAa~~~~~~~~iyfFkG--------- 87 (207)
T 1pex_A 28 AITSLRGETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPN---RIDAAYEHPSHDLIFIFRG--------- 87 (207)
T ss_dssp EEEEETTEEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCS---SCCEEEEETTTTEEEEEET---------
T ss_pred EEEeCCCcEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCC---CccEEEEeccCCcEEEEcc---------
Confidence 345578999999763 36677654433321 1 23433 222222222 689999965
Q ss_pred cceeEEEeCCCCc---eEECCCCCCCC---CCceEEEE--CCEEEEEccC
Q 016328 189 TAHTFVLDTETKK---WQDLPPLPVPR---YAPATQLW--RGRLHVMGGS 230 (391)
Q Consensus 189 ~~~~~~yd~~~~~---W~~~~~~~~~r---~~~~~~~~--~~~iyv~GG~ 230 (391)
+.+|+|+..+-. =+.+..+-.|. .--++... ++++|+|-|.
T Consensus 88 -~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~ 136 (207)
T 1pex_A 88 -RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN 136 (207)
T ss_dssp -TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT
T ss_pred -CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC
Confidence 556777643211 12233222221 22233333 4899999774
No 223
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=66.59 E-value=1.1e+02 Score=30.56 Aligned_cols=113 Identities=15% Similarity=0.063 Sum_probs=55.2
Q ss_pred ccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCC----CCeeeC--CCCCCCCCcc
Q 016328 92 FQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTD----NTWGGR--FDMPREMAHS 163 (391)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~--~~~p~~~~r~ 163 (391)
+..++........+.. ..+.-++++.. ++.||+.--. ...+.++++.+ ..-..+ ..+.. +
T Consensus 388 I~~id~~~~~~~~~~~--~~~~p~gla~d~~~~~Ly~sD~~------~~~I~~~~~~g~~~~~~~~~~i~~~~~~--P-- 455 (699)
T 1n7d_A 388 VRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQA--P-- 455 (699)
T ss_dssp -CEECTTSCCEECCSC--CCTTCCCCEEETTTTEEEECCTT------TTSBEEEESCCCCC-CCCCCBCCSCC----C--
T ss_pred eEEEeCCCCcceeeec--cCcceEEEccccccCeEEEEecC------CCeEEEEecCCCCCCcceEEEEeCCCCC--c--
Confidence 3444554444443321 12222344433 5688886322 23588888875 111111 11222 1
Q ss_pred eEEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC--CCCCCCCCceEEE--ECCEEEEEc
Q 016328 164 HLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (391)
Q Consensus 164 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~G 228 (391)
.++++ .+++||+.-.. ...++++|+....-+.+. .+..|+ .+++ .++.||+.-
T Consensus 456 -~glavD~~~g~LY~tD~~--------~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td 514 (699)
T 1n7d_A 456 -DGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTD 514 (699)
T ss_dssp -CCEECCCSSSBCEECCTT--------TSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECC
T ss_pred -ceEEEEeeCCcEEEEecc--------CCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcc
Confidence 23333 47889986321 456889998876544442 233333 2333 367788764
No 224
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=64.80 E-value=57 Score=26.67 Aligned_cols=53 Identities=13% Similarity=0.253 Sum_probs=31.6
Q ss_pred EEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCC--CceEE--C----CCCCCCCCCceEEEE--CCEEEEEccC
Q 016328 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTET--KKWQD--L----PPLPVPRYAPATQLW--RGRLHVMGGS 230 (391)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~--~~W~~--~----~~~~~~r~~~~~~~~--~~~iyv~GG~ 230 (391)
+++..++++|+|=| ..+|+++... ..... + +.+|.. --|+... ++++|+|-|.
T Consensus 11 Ai~~~~g~~yfFkg----------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~--IDAa~~~~~~~~~yfFkG~ 73 (195)
T 1itv_A 11 AIAEIGNQLYLFKD----------GKYWRFSEGRGSRPQGPFLIADKWPALPRK--LDSVFEEPLSKKLFFFSGR 73 (195)
T ss_dssp EEEEETTEEEEEET----------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS--CSEEEECTTTCCEEEEETT
T ss_pred EEEEeCCEEEEEEC----------CEEEEEECCccccCCCcEEhhhccCCCCCC--ccEEEEECCCCeEEEEeCC
Confidence 45667999999954 5678887755 22221 1 234432 2334443 6789999774
No 225
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=64.74 E-value=86 Score=28.74 Aligned_cols=147 Identities=10% Similarity=-0.032 Sum_probs=72.2
Q ss_pred ecCEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEeecC-cccccccccc-cccccccccCc-eEEccC
Q 016328 32 VADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK-DVVPKRILPA-TFQDLPAPELK-WEKMKA 107 (391)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~-~~~~~d~~~~~-W~~~~~ 107 (391)
-++.||+....+ +.+.+||+.+++ ..+.... .... ++....+ .......... .++.+++.+.. ...+..
T Consensus 140 ~~g~lyv~d~~~-----~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~ 212 (409)
T 3hrp_A 140 GNNTVLAYQRDD-----PRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQ 212 (409)
T ss_dssp STTEEEEEETTT-----TEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEE
T ss_pred CCCCEEEEecCC-----CcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeee
Confidence 367889887532 368899999877 3333211 1111 1111111 0011111111 56777766542 223311
Q ss_pred CC--CCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCC-CCCcce-E-EEEEe--CCEEEEEe
Q 016328 108 AP--VPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPR-EMAHSH-L-GMVTD--GRYIYVVT 178 (391)
Q Consensus 108 ~p--~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~~~r~~-~-~~~~~--~~~iyv~G 178 (391)
++ ....-+.+++. ++.||+.-. ...+++||+.+.....+...+. +..... . .+++. ++.||+..
T Consensus 213 ~~~~~~~~p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 213 LGSTFSGKIGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CCTTSCSCCCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred ccchhcCCcEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 11 11112333333 578999421 2359999998877554411111 001111 1 44444 68999984
Q ss_pred CccCCCCCCCcceeEEEeCCCC
Q 016328 179 GQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 179 G~~~~~~~~~~~~~~~yd~~~~ 200 (391)
.. ...+++||+...
T Consensus 286 ~~--------~~~I~~~~~~g~ 299 (409)
T 3hrp_A 286 QN--------LSSVYKITPDGE 299 (409)
T ss_dssp TT--------TTEEEEECTTCC
T ss_pred CC--------CCEEEEEecCCC
Confidence 21 467899998765
No 226
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=64.46 E-value=92 Score=29.75 Aligned_cols=197 Identities=11% Similarity=0.020 Sum_probs=88.8
Q ss_pred EEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 118 IQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 118 ~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
...+++.+++++..+ ..+.+|+..+.+-+.+...+. ......+...+++......++.. ....++..++
T Consensus 29 ~~~DG~~la~~s~~~-----g~~~lw~~~~g~~~~lt~~~~---~~~~~~~~spd~~l~~~~~~~g~---~~~~l~~~~~ 97 (582)
T 3o4h_A 29 GVVDGDKLLVVGFSE-----GSVNAYLYDGGETVKLNREPI---NSVLDPHYGVGRVILVRDVSKGA---EQHALFKVNT 97 (582)
T ss_dssp EEETTTEEEEEEEET-----TEEEEEEEETTEEEECCSSCC---SEECEECTTCSEEEEEEECSTTS---CCEEEEEEET
T ss_pred cCCCCCeEEEEEccC-----CceeEEEEcCCCcEeeecccc---cccccccCCCCeEEEEeccCCCC---cceEEEEEec
Confidence 345666566655421 124555555555555433221 11122222233555444321111 1456788887
Q ss_pred --CCCceEECCCCCCCCCCceEEEEC-CEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCcceeEEEE
Q 016328 198 --ETKKWQDLPPLPVPRYAPATQLWR-GRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVV 274 (391)
Q Consensus 198 --~~~~W~~~~~~~~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~ 274 (391)
....- .+...+..+ ..+...+ +.++++.+..+. ...|+ .++.+-+.+...+. . ..+..-
T Consensus 98 ~~~g~~~-~l~~~~~~~--~~~~s~dg~~~~~~s~~~~~-----~~l~d-------~~~g~~~~l~~~~~--~-~~~~sp 159 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVKPMR--ILSGVDTGEAVVFTGATEDR-----VALYA-------LDGGGLRELARLPG--F-GFVSDI 159 (582)
T ss_dssp TSTTCCE-ECTTSCSBE--EEEEEECSSCEEEEEECSSC-----EEEEE-------EETTEEEEEEEESS--C-EEEEEE
T ss_pred cCCCccc-cccCCCCce--eeeeCCCCCeEEEEecCCCC-----ceEEE-------ccCCcEEEeecCCC--c-eEEECC
Confidence 44332 333322222 2233334 345555443321 22554 33444444433232 1 123345
Q ss_pred CCEEEEEeCCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCceeeEEEECCEEEEEccccCCC
Q 016328 275 DDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKH 353 (391)
Q Consensus 275 ~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~ 353 (391)
+++.+++++..... ..+++.+| .+.+++.+..-+. .........||+.++.+..++.
T Consensus 160 DG~~la~~~~~~~~------------------~~~i~~~d~~~g~~~~l~~~~~---~~~~~~~SpDG~~l~~~~~~~~- 217 (582)
T 3o4h_A 160 RGDLIAGLGFFGGG------------------RVSLFTSNLSSGGLRVFDSGEG---SFSSASISPGMKVTAGLETARE- 217 (582)
T ss_dssp ETTEEEEEEEEETT------------------EEEEEEEETTTCCCEEECCSSC---EEEEEEECTTSCEEEEEECSSC-
T ss_pred CCCEEEEEEEcCCC------------------CeEEEEEcCCCCCceEeecCCC---ccccceECCCCCEEEEccCCCe-
Confidence 66666665543211 12488888 7777777643221 1112223456766553332221
Q ss_pred CcccceeEecceEEEecCccc
Q 016328 354 PTTKKMVLVGEIFQFNLNTLV 374 (391)
Q Consensus 354 ~~~~~~~~~~~v~~~d~~~~~ 374 (391)
..++.+|+++..
T Consensus 218 ---------~~i~~~d~~~~~ 229 (582)
T 3o4h_A 218 ---------ARLVTVDPRDGS 229 (582)
T ss_dssp ---------EEEEEECTTTCC
T ss_pred ---------eEEEEEcCCCCc
Confidence 268888886655
No 227
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=63.56 E-value=73 Score=27.56 Aligned_cols=94 Identities=9% Similarity=-0.041 Sum_probs=51.8
Q ss_pred ccccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEE
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMV 168 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~ 168 (391)
..++++|+... .......+ ..-+.++.. ++++||....... ..+.++|+.+.+.+.+..++. .+.....+
T Consensus 53 ~~I~~~d~~g~-~~~~~~~~--~~p~gia~~~dG~l~vad~~~~~----~~v~~~d~~~g~~~~~~~~~~--~~~~~g~~ 123 (306)
T 2p4o_A 53 GEIVSITPDGN-QQIHATVE--GKVSGLAFTSNGDLVATGWNADS----IPVVSLVKSDGTVETLLTLPD--AIFLNGIT 123 (306)
T ss_dssp TEEEEECTTCC-EEEEEECS--SEEEEEEECTTSCEEEEEECTTS----CEEEEEECTTSCEEEEEECTT--CSCEEEEE
T ss_pred CeEEEECCCCc-eEEEEeCC--CCceeEEEcCCCcEEEEeccCCc----ceEEEEcCCCCeEEEEEeCCC--ccccCccc
Confidence 46777777653 22222222 122333332 5678887532111 237889988888877655543 34444444
Q ss_pred E-eCCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 169 T-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 169 ~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
. .++.+|+.-- ....++++|+.+.
T Consensus 124 ~~~~~~~~v~d~--------~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 124 PLSDTQYLTADS--------YRGAIWLIDVVQP 148 (306)
T ss_dssp ESSSSEEEEEET--------TTTEEEEEETTTT
T ss_pred ccCCCcEEEEEC--------CCCeEEEEeCCCC
Confidence 3 3567787631 1357899998764
No 228
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=63.35 E-value=17 Score=32.69 Aligned_cols=111 Identities=12% Similarity=0.026 Sum_probs=52.8
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT 169 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~ 169 (391)
.++.+|..+.+-+.+...+. +..+....- +++.+++............++.+|..+...+.+..... .......+.
T Consensus 169 ~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~--~~~~~~~~~ 245 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAE--GESCTHEFW 245 (388)
T ss_dssp EEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCT--TEEEEEEEE
T ss_pred eEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCC--CcccccceE
Confidence 46666766655444432111 111222222 44444443332222223469999998877776644321 111112222
Q ss_pred -eCCE-EEEEeCccCCCCCCCcceeEEEeCCCCceEECCCC
Q 016328 170 -DGRY-IYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPL 208 (391)
Q Consensus 170 -~~~~-iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~ 208 (391)
-+++ |+......+.. ...++++|+++.+-+.+..+
T Consensus 246 spdg~~l~~~~~~~~~~----~~~l~~~d~~~g~~~~l~~~ 282 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSP----DRFIYSADPETLENRQLTSM 282 (388)
T ss_dssp CTTSSCEEEEEEETTCC----CEEEEEECTTTCCEEEEEEE
T ss_pred CCCCCEEEEEecCCCCC----cceEEEEecCCCceEEEEcC
Confidence 2444 54433222211 23599999999886665443
No 229
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=62.85 E-value=1.3e+02 Score=30.16 Aligned_cols=226 Identities=15% Similarity=0.182 Sum_probs=109.6
Q ss_pred cccccccccCceEEccCCCCCc----cCceEEEEC----CEEEEEeccCCCCC-C-cceeEEEECCCCCeeeCCC-CCCC
Q 016328 91 TFQDLPAPELKWEKMKAAPVPR----LDGAAIQIK----NLLYVFAGYGSIDY-V-HSHVDIYNFTDNTWGGRFD-MPRE 159 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~----~~vyv~GG~~~~~~-~-~~~~~~yd~~~~~W~~~~~-~p~~ 159 (391)
.+++.+-...+|+++.+.+..+ .....+.++ +.||+..|...... . ...+++=.-.-++|+.+.. .+.+
T Consensus 46 gv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~ 125 (737)
T 2cn3_A 46 GAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMG 125 (737)
T ss_dssp CEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCC
T ss_pred cEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccC
Confidence 4666666677999986643221 122233333 58998876321111 0 1224443444568998642 1110
Q ss_pred --C-Cc-ceEEEEEe---CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCC--------------CCceEE
Q 016328 160 --M-AH-SHLGMVTD---GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPR--------------YAPATQ 218 (391)
Q Consensus 160 --~-~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r--------------~~~~~~ 218 (391)
. .+ ..+.+++. .+.||+.. ..+ ..+++=+-.-.+|+.+..+|... .+....
T Consensus 126 ~~~~g~~~~~~l~~~p~~~~~v~~g~-~~g-------~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v 197 (737)
T 2cn3_A 126 GNMPGRSMGERLAIDPNDNRILYLGT-RCG-------NGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWV 197 (737)
T ss_dssp TTSTTTTSCCCEEECSSCTTCEEEEC-STT-------CCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEE
T ss_pred CCcCcccccceEEECCCCCCEEEEee-ccC-------CcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEEEE
Confidence 0 11 11334442 25677642 111 23454444567899987665321 011122
Q ss_pred EEC----------CEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCcceeEEEE-CCEEEEEeCCCCC
Q 016328 219 LWR----------GRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVV-DDRLLVIGGQEGD 287 (391)
Q Consensus 219 ~~~----------~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~-~~~i~v~GG~~~~ 287 (391)
.++ +.||+.-... ....|.- .....+|+.+..+|.....+..+.. ++.+|+..+....
T Consensus 198 ~~dp~~~~~~~~~~~v~~~~~~~------~~~v~~S-----~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g 266 (737)
T 2cn3_A 198 VFDKSSSTPGNPTKTIYVGVADK------NESIYRS-----TDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCG 266 (737)
T ss_dssp EECGGGSCTTSCCSCEEEEESCS------SCCEEEE-----SSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCC
T ss_pred EcCCCCcccCCCCCEEEEEecCC------CccEEEE-----cCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCC
Confidence 231 2566642111 0112221 2346789998877765443333332 7788886543210
Q ss_pred CCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCC--CCCceeeEEEE----CCEEEEEcc
Q 016328 288 FMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKP--DSHIEFAWVLV----NNSIVIVGG 348 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~--~~~~~~~~~~~----~~~l~i~GG 348 (391)
.. .. .-...+|+.+ ...+|+.+.+.|.. ..+...+.+.+ .+.||+.+.
T Consensus 267 ~y--------~~-----~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~ 321 (737)
T 2cn3_A 267 PY--------DG-----NGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSM 321 (737)
T ss_dssp SS--------CC-----SCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEE
T ss_pred cc--------cc-----ccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEec
Confidence 00 00 0123488888 88999999876542 12222322333 257887764
No 230
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=62.62 E-value=88 Score=31.31 Aligned_cols=117 Identities=16% Similarity=0.134 Sum_probs=58.6
Q ss_pred ccccccccCceEEccCCCCC-ccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC--CCCCCCCcceEE
Q 016328 92 FQDLPAPELKWEKMKAAPVP-RLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLG 166 (391)
Q Consensus 92 ~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~r~~~~ 166 (391)
+.+||+.+++++....-... .....+... ++.|++.. . .-+.+||+.+++++... .+|. ..-.+
T Consensus 495 l~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~-------~Gl~~~~~~~~~~~~~~~~gl~~---~~i~~ 563 (758)
T 3ott_A 495 IDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H-------GGVMRINPKDESQQSISFGSFSN---NEILS 563 (758)
T ss_dssp EEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T-------TEEEEECC--CCCCBCCCCC------CCEEE
T ss_pred cEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c-------CceEEEecCCCceEEecccCCCc---cceEE
Confidence 44566666666554211111 111112222 45777643 1 13889999998887653 3333 22344
Q ss_pred EEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEE-ECCEEEEEccCC
Q 016328 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL-WRGRLHVMGGSG 231 (391)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~ 231 (391)
+...++.||+.. .+-+.+|||++.+.+... ++......++.. .++.|| |||..
T Consensus 564 i~~~~g~lWi~t----------~~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~l~-fG~~~ 617 (758)
T 3ott_A 564 MTCVKNSIWVST----------TNGLWIIDRKTMDARQQN-MTNKRFTSLLFDPKEDCVY-LGGAD 617 (758)
T ss_dssp EEEETTEEEEEE----------SSCEEEEETTTCCEEEC---CCCCCSEEEEETTTTEEE-EECBS
T ss_pred EEECCCCEEEEC----------CCCeEEEcCCCceeEEec-CCCCceeeeEEECCCCcEE-EecCC
Confidence 455688998864 244789999998877643 332222222222 256665 55544
No 231
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=61.84 E-value=40 Score=31.04 Aligned_cols=101 Identities=11% Similarity=0.039 Sum_probs=54.2
Q ss_pred ccccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCC---CCCcceeEEEECCCCCeeeCCCCCC------
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSI---DYVHSHVDIYNFTDNTWGGRFDMPR------ 158 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~---~~~~~~~~~yd~~~~~W~~~~~~p~------ 158 (391)
+.+..+|..+.+ .+..++....-+ ++.- +..+||..-.... +...+.+.++|+.+.+-..--+++.
T Consensus 59 ~~V~ViD~~t~~--v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 59 TQQFVIDGEAGR--VIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp EEEEEEETTTTE--EEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred CEEEEEECCCCe--EEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 478888887664 333344333334 4333 4479997532110 0113569999999887443111111
Q ss_pred -CCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCc
Q 016328 159 -EMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK 201 (391)
Q Consensus 159 -~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~ 201 (391)
..+ ....+...+.++||.... ..+.+...|..+.+
T Consensus 136 g~~P-~~~a~spDGk~lyVan~~-------~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 136 GTYP-WMTSLTPDGKTLLFYQFS-------PAPAVGVVDLEGKA 171 (386)
T ss_dssp SCCG-GGEEECTTSSEEEEEECS-------SSCEEEEEETTTTE
T ss_pred CCCC-ceEEEcCCCCEEEEEEcC-------CCCeEEEEECCCCc
Confidence 011 122333346688987321 13678899998875
No 232
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=60.78 E-value=83 Score=27.22 Aligned_cols=145 Identities=9% Similarity=0.085 Sum_probs=72.8
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEeecC--cccccccccccccccccccCceEEccCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK--DVVPKRILPATFQDLPAPELKWEKMKAAP 109 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~~~--~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 109 (391)
++.||+.-... ..+.+||+.... ..+.. +....+++....+ +......-...++.+|+.+.+.+.+..++
T Consensus 42 ~g~lyv~d~~~-----~~I~~~d~~g~~~~~~~~--~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~ 114 (306)
T 2p4o_A 42 DGTIFVTNHEV-----GEIVSITPDGNQQIHATV--EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP 114 (306)
T ss_dssp TSCEEEEETTT-----TEEEEECTTCCEEEEEEC--SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCCEEEEeCCC-----CeEEEECCCCceEEEEeC--CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC
Confidence 56788875322 367889988765 22221 1122333332222 11110000113667777777777666555
Q ss_pred CCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCC---CeeeCCC----CC-CCCCcceEEEEEeCCEEEEEeCc
Q 016328 110 VPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDN---TWGGRFD----MP-REMAHSHLGMVTDGRYIYVVTGQ 180 (391)
Q Consensus 110 ~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~----~p-~~~~r~~~~~~~~~~~iyv~GG~ 180 (391)
..+.....+.. ++.+|+.--. ...++++|+.+. .|...+. .+ ... ....++...++.||+.--
T Consensus 115 ~~~~~~g~~~~~~~~~~v~d~~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~-~~pngis~dg~~lyv~d~- 186 (306)
T 2p4o_A 115 DAIFLNGITPLSDTQYLTADSY------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVF-PAANGLKRFGNFLYVSNT- 186 (306)
T ss_dssp TCSCEEEEEESSSSEEEEEETT------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCS-CSEEEEEEETTEEEEEET-
T ss_pred CccccCcccccCCCcEEEEECC------CCeEEEEeCCCCcEeEEEECCccccccccCCC-CcCCCcCcCCCEEEEEeC-
Confidence 44443344333 4567775321 236899998764 2311110 11 111 122234445678998732
Q ss_pred cCCCCCCCcceeEEEeCCC
Q 016328 181 YGPQCRGPTAHTFVLDTET 199 (391)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~ 199 (391)
..+.+++||+..
T Consensus 187 -------~~~~I~~~~~~~ 198 (306)
T 2p4o_A 187 -------EKMLLLRIPVDS 198 (306)
T ss_dssp -------TTTEEEEEEBCT
T ss_pred -------CCCEEEEEEeCC
Confidence 146789999875
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=60.15 E-value=76 Score=26.63 Aligned_cols=90 Identities=14% Similarity=0.056 Sum_probs=50.1
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
+++||+.-.. ...+.+||+.+..-+.+..... ...+.+++. ++.||+.-.. ...+.++|+.
T Consensus 47 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~---~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~ 109 (267)
T 1npe_A 47 DKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDL---GSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMD 109 (267)
T ss_dssp TTEEEEEETT------TTEEEEEESSSCCCEEEECTTC---CCEEEEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEECC------CCEEEEEecCCCCcEEEEECCC---CCccEEEEEecCCeEEEEECC--------CCEEEEEEcC
Confidence 5689987532 2468999998765333221111 122445553 6799998532 4678899987
Q ss_pred CCceEECCCCCCCCCCceEEEE--CCEEEEEc
Q 016328 199 TKKWQDLPPLPVPRYAPATQLW--RGRLHVMG 228 (391)
Q Consensus 199 ~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~G 228 (391)
...-+.+.+....+ -..+++. +++||+..
T Consensus 110 g~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~ 140 (267)
T 1npe_A 110 GTQRRVLFDTGLVN-PRGIVTDPVRGNLYWTD 140 (267)
T ss_dssp SCSCEEEECSSCSS-EEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCCCC-ccEEEEeeCCCEEEEEE
Confidence 65433332111111 1233333 68899985
No 234
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=58.94 E-value=1.3e+02 Score=29.89 Aligned_cols=118 Identities=9% Similarity=0.081 Sum_probs=62.6
Q ss_pred ccccccccccCceEEccC--CCCCccCceEEE--ECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC--CCCCCCCcc
Q 016328 90 ATFQDLPAPELKWEKMKA--APVPRLDGAAIQ--IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHS 163 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~--~p~~r~~~~~~~--~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~r~ 163 (391)
..+.++++....-+.+.. +..|+ .+++ .++.||+.-- . . ...++++++....-+.+. .+.. +
T Consensus 475 ~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~-~-~---~~~I~~~~~dG~~~~~l~~~~l~~--P-- 542 (699)
T 1n7d_A 475 GTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDW-G-T---PAKIKKGGLNGVDIYSLVTENIQW--P-- 542 (699)
T ss_dssp SCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCC-S-S---SCCEEBCCSSSCCCCEESCSSCSS--C--
T ss_pred CeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEccc-C-C---CCeEEEEeCCCCCeeEEEeCCCCC--c--
Confidence 356677766544333322 22332 2232 2567887541 1 0 135888887654433322 2222 2
Q ss_pred eEEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCC-CCCCCceEEEECCEEEEEc
Q 016328 164 HLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQLWRGRLHVMG 228 (391)
Q Consensus 164 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~~~~~iyv~G 228 (391)
.++++ .+++||+.-.. ...++++|+....-+.+.... ....-.++++..+.||+.-
T Consensus 543 -nGlavd~~~~~LY~aD~~--------~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd 601 (699)
T 1n7d_A 543 -NGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 601 (699)
T ss_dssp -CCEEECTTTCCEEEEETT--------TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEEC
T ss_pred -cEEEEeccCCEEEEEecC--------CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEe
Confidence 23444 46889998421 467899998765444433221 1223345677888999985
No 235
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=58.92 E-value=92 Score=27.18 Aligned_cols=228 Identities=11% Similarity=0.010 Sum_probs=106.6
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE-CCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCC------CCCCC
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI-KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDM------PREMA 161 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~------p~~~~ 161 (391)
.+..+|+.+.+.........-..-+.+++- ++++||.... ...+.+||+..+. -..+... ... -
T Consensus 70 ~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~-~ 142 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNH-F 142 (329)
T ss_dssp CEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT------TTEEEEECTTCSSCCSEEESBTTBCCCSTTC-C
T ss_pred cEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC------CCEEEEEeCCCCeEEEEEecccCCCCCCccc-c
Confidence 567777765554322110000011223322 5679987643 2458899987652 2222110 111 1
Q ss_pred cceEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCC-------CCCCC-CceEEEE-C-CEEEEEcc
Q 016328 162 HSHLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPL-------PVPRY-APATQLW-R-GRLHVMGG 229 (391)
Q Consensus 162 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-------~~~r~-~~~~~~~-~-~~iyv~GG 229 (391)
.....+++. ++.|||..+.. ...+.+||+....-..+... +.... -+.+++. + +.|||...
T Consensus 143 ~~P~~ia~~~~~g~lyv~d~~~-------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 143 CQPTDVAVEPSTGAVFVSDGYC-------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp SSEEEEEECTTTCCEEEEECSS-------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred CCCcEEEEeCCCCeEEEEeCCC-------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 123455554 68999997521 36788999765544433211 11111 2234443 3 79999864
Q ss_pred CCCCccCCCccceEeeeecCCcccCCceeecCCC-CCCcceeEEEECCEEEEEeCCCCCCCcCCCCCccccCcCCceecC
Q 016328 230 SGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIP-RGGPHRACVVVDDRLLVIGGQEGDFMAKPGSPIFKCSRRNEVVYD 308 (391)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (391)
.. ..+.+|+ +.+.+....-..+ ......+.+...+.+|...|..--.. ....
T Consensus 216 ~~-----~~I~~~~-------~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~---------------~~~~ 268 (329)
T 3fvz_A 216 EN-----GRIQCFK-------TDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGD---------------QEPV 268 (329)
T ss_dssp TT-----TEEEEEE-------TTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTC---------------SCCC
T ss_pred CC-----CEEEEEE-------CCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEecc---------------CCCc
Confidence 32 2244443 4434443322111 11112233444577777766421100 0123
Q ss_pred cEEEEc-CcCcEEE-cCCCCCCCCCceeeEEE-ECCEEEEEccccCCCCcccceeEecceEEEecCc
Q 016328 309 DVYMLD-DEMKWKV-LPSMPKPDSHIEFAWVL-VNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNT 372 (391)
Q Consensus 309 ~v~~~d-~~~~W~~-v~~~~~~~~~~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~ 372 (391)
.++.+| .+.+... +.+.+.. .....++++ .++.|||....+. .|+.|+++.
T Consensus 269 ~v~~~~~~~g~~~~~~~~~~~~-~~~p~~ia~~~dG~lyvad~~~~------------~I~~~~~~~ 322 (329)
T 3fvz_A 269 QGFVMNFSSGEIIDVFKPVRKH-FDMPHDIVASEDGTVYIGDAHTN------------TVWKFTLTE 322 (329)
T ss_dssp CEEEEETTTCCEEEEECCSSSC-CSSEEEEEECTTSEEEEEESSSC------------CEEEEEEEE
T ss_pred EEEEEEcCCCeEEEEEcCCCCc-cCCeeEEEECCCCCEEEEECCCC------------EEEEEeCCc
Confidence 577777 5554433 2221111 112233333 4678888765432 577777643
No 236
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=58.32 E-value=1.4e+02 Score=29.00 Aligned_cols=74 Identities=23% Similarity=0.387 Sum_probs=47.1
Q ss_pred eEEEECCEEEEEeccCCCCCCcceeEEEECCCCC--eeeCCCCCCCCC----cceEEEEEeCCEEEEEeCccCCCCCCCc
Q 016328 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT--WGGRFDMPREMA----HSHLGMVTDGRYIYVVTGQYGPQCRGPT 189 (391)
Q Consensus 116 ~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~~~----r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 189 (391)
+.++.++.||+.... ..+.++|..+.+ |+.-...+.... ....+.++.+++||+... .
T Consensus 63 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------d 126 (582)
T 1flg_A 63 QAIVSDGVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------D 126 (582)
T ss_dssp CCEEETTEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------T
T ss_pred ccEEECCEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------C
Confidence 346679999998753 238899988764 887433322100 011234578999988532 3
Q ss_pred ceeEEEeCCCCc--eEEC
Q 016328 190 AHTFVLDTETKK--WQDL 205 (391)
Q Consensus 190 ~~~~~yd~~~~~--W~~~ 205 (391)
..++.+|.++.+ |+.-
T Consensus 127 g~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 127 ASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TEEEEEESSSCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeec
Confidence 568899998765 8753
No 237
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=57.74 E-value=97 Score=27.06 Aligned_cols=152 Identities=8% Similarity=0.026 Sum_probs=66.5
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCC-CCCCCCceeeEeecC-cccccccccccccccccccCceEEccCCC
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPN-NGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAP 109 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~-~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p 109 (391)
++.+++.|+.++ .+..||..+.+ ..+.. .....-..+.....+ ....+ .....+..||..+.+-.. ..+.
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg-~~dg~i~iwd~~~~~~~~-~~~~ 210 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY-SPDGILDVYNLSSPDQAS-SRFP 210 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE-CTTSCEEEEESSCTTSCC-EECC
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCCCCc-cEEe
Confidence 456667777665 57788888877 33222 111111122221111 11111 123356677776654220 1111
Q ss_pred C-CccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCee-eCCCCCCC-CCcceEEEEEe-CCEEEEEeCc-cC
Q 016328 110 V-PRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG-GRFDMPRE-MAHSHLGMVTD-GRYIYVVTGQ-YG 182 (391)
Q Consensus 110 ~-~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~-~~r~~~~~~~~-~~~iyv~GG~-~~ 182 (391)
. ....-..+.+ ++..++.|+ ++ .+.+||+.+.+-. .+..+..+ ..-...+++.. ++++++.|+. ++
T Consensus 211 ~~h~~~v~~l~fs~~g~~l~s~~-~~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~ 283 (343)
T 3lrv_A 211 VDEEAKIKEVKFADNGYWMVVEC-DQ------TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN 283 (343)
T ss_dssp CCTTSCEEEEEECTTSSEEEEEE-SS------BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT
T ss_pred ccCCCCEEEEEEeCCCCEEEEEe-CC------eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCC
Confidence 1 1111122222 455666665 32 4889998775421 12221110 00001123332 4555555432 22
Q ss_pred CCCCCCcceeEEEeCCCCceEE
Q 016328 183 PQCRGPTAHTFVLDTETKKWQD 204 (391)
Q Consensus 183 ~~~~~~~~~~~~yd~~~~~W~~ 204 (391)
.-.+|.|+...+.|+.
T Consensus 284 ------~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 284 ------SLTIYKFDKKTKNWTK 299 (343)
T ss_dssp ------EEEEEEECTTTCSEEE
T ss_pred ------cEEEEEEcccccceEe
Confidence 2345556667778987
No 238
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=56.91 E-value=1e+02 Score=26.98 Aligned_cols=171 Identities=9% Similarity=0.048 Sum_probs=85.0
Q ss_pred cCEEEEecCCCCcccceeEeeecCCC----Ce--eecCCCCCCCCceeeEe-ecCcccccccccccccccccccCceEEc
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYH----NS--IILPNNGPQKGENIGVK-TKKDVVPKRILPATFQDLPAPELKWEKM 105 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~----~~--~~lp~~~~r~~~g~~~~-~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 105 (391)
++.||+.-... ..+.++|+.. .. ..++. ......++++- ..+...-.+.....+..+++....-..+
T Consensus 41 ~~~ly~~D~~~-----~~I~~~~~~g~~~~~~~~~~~~~-~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~ 114 (316)
T 1ijq_A 41 SNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL 114 (316)
T ss_dssp TTEEEEEETTT-----TEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE
T ss_pred CCEEEEEECCC-----CcEEEEECCCCCCCcccEEEEeC-CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEE
Confidence 57888886532 3678888876 22 22222 11222455543 1221111111223566666654432222
Q ss_pred c--CCCCCccCceEEE--ECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe--CCEEEEEeC
Q 016328 106 K--AAPVPRLDGAAIQ--IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD--GRYIYVVTG 179 (391)
Q Consensus 106 ~--~~p~~r~~~~~~~--~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~--~~~iyv~GG 179 (391)
. .+..|+ .+++ .++.||+..-.. ...+++++++...-+.+..... ....++++. +++||+.-.
T Consensus 115 ~~~~~~~P~---~iavdp~~g~ly~~d~~~-----~~~I~~~~~dG~~~~~~~~~~~---~~P~gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 115 FRENGSKPR---AIVVDPVHGFMYWTDWGT-----PAKIKKGGLNGVDIYSLVTENI---QWPNGITLDLLSGRLYWVDS 183 (316)
T ss_dssp EECTTCCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCCEEEEECSSC---SCEEEEEEETTTTEEEEEET
T ss_pred EECCCCCcc---eEEeCCCCCEEEEEccCC-----CCeEEEEcCCCCCeEEEEECCC---CCceEEEEeccCCEEEEEEC
Confidence 2 222332 3333 367999875211 2468999987654433321111 122355554 789999842
Q ss_pred ccCCCCCCCcceeEEEeCCCCceEECCCC-CCCCCCceEEEECCEEEEEc
Q 016328 180 QYGPQCRGPTAHTFVLDTETKKWQDLPPL-PVPRYAPATQLWRGRLHVMG 228 (391)
Q Consensus 180 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~~~~~iyv~G 228 (391)
. ...++++|+....-+.+... .....-.++++.++.||+.-
T Consensus 184 ~--------~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d 225 (316)
T 1ijq_A 184 K--------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 225 (316)
T ss_dssp T--------TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred C--------CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEE
Confidence 1 46899999876443333211 11122246667789999885
No 239
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=56.90 E-value=91 Score=26.48 Aligned_cols=87 Identities=7% Similarity=-0.000 Sum_probs=50.9
Q ss_pred CEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 122 NLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 122 ~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
+.+|+++..+ ..+.+||+.++ .+.... +. ....+++. -++++|+.... ...+.+||+.+.
T Consensus 40 ~~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~~---~~~~~l~~~~dg~l~v~~~~--------~~~i~~~d~~~g 100 (296)
T 3e5z_A 40 SAVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-PS---HHQNGHCLNKQGHLIACSHG--------LRRLERQREPGG 100 (296)
T ss_dssp TEEEEEEGGG------TEEEEEETTSC-EEEEES-SC---SSEEEEEECTTCCEEEEETT--------TTEEEEECSTTC
T ss_pred CEEEEEeCCC------CEEEEEECCCC-eEEEEC-CC---CCcceeeECCCCcEEEEecC--------CCeEEEEcCCCC
Confidence 3588887542 35899999987 555432 21 12234444 36788877431 356899999888
Q ss_pred ceEECCCCC----CCCCCceEEEECCEEEEE
Q 016328 201 KWQDLPPLP----VPRYAPATQLWRGRLHVM 227 (391)
Q Consensus 201 ~W~~~~~~~----~~r~~~~~~~~~~~iyv~ 227 (391)
+.+.+.... ..+....+..-+++||+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 877653211 112222333346788886
No 240
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=55.99 E-value=1.5e+02 Score=29.13 Aligned_cols=65 Identities=3% Similarity=-0.283 Sum_probs=32.9
Q ss_pred cccccccccCceEEccCCCCCc--cCceEE-EECCEEEEEeccCCCC---CCcceeEEEECCCCCeeeCCC
Q 016328 91 TFQDLPAPELKWEKMKAAPVPR--LDGAAI-QIKNLLYVFAGYGSID---YVHSHVDIYNFTDNTWGGRFD 155 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r--~~~~~~-~~~~~vyv~GG~~~~~---~~~~~~~~yd~~~~~W~~~~~ 155 (391)
.+..+|..+.+-..+-...... .-.+.+ .-+++.++++..+... .....++++|..+.+-+.+..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 108 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP 108 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC
Confidence 5667777776544432221110 012222 2255555555443221 123579999999887655543
No 241
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=55.99 E-value=97 Score=29.09 Aligned_cols=59 Identities=14% Similarity=0.101 Sum_probs=33.8
Q ss_pred eEEEECCEEEEEeccCCCCCCcceeEEEECCC---------CCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCC
Q 016328 116 AAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTD---------NTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQC 185 (391)
Q Consensus 116 ~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~---------~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~ 185 (391)
+++.+++.+|+|-|. ..|+++... ..|..+ |. ....+... .++++|+|=|
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~L---P~---~iDAa~~~~~~g~~~fFKg------ 326 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQL---PN---GLEAAYEFADRDEVRFFKG------ 326 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTS---CS---SCCEEEEEGGGTEEEEEET------
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCCcccceehhHhccCC---CC---CeeEEEEEcCCCeEEEEeC------
Confidence 456689999999873 245554433 334433 32 11222222 3789999954
Q ss_pred CCCcceeEEEeCC
Q 016328 186 RGPTAHTFVLDTE 198 (391)
Q Consensus 186 ~~~~~~~~~yd~~ 198 (391)
+.+|+|+..
T Consensus 327 ----~~~W~~~~~ 335 (450)
T 1su3_A 327 ----NKYWAVQGQ 335 (450)
T ss_dssp ----TEEEEEETT
T ss_pred ----CEEEEecCC
Confidence 467777743
No 242
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=55.16 E-value=1.2e+02 Score=27.41 Aligned_cols=161 Identities=11% Similarity=0.006 Sum_probs=80.7
Q ss_pred cccccccccccCceEEccC--CCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC--CCCCCCCcce
Q 016328 89 PATFQDLPAPELKWEKMKA--APVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSH 164 (391)
Q Consensus 89 ~~~~~~~d~~~~~W~~~~~--~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~r~~ 164 (391)
...+.++++.....+.+.. +..| .+.++...++.||+.-.. ...+++++++...-+.+. .+.. .
T Consensus 137 ~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~-----P 204 (386)
T 3v65_B 137 LDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEK-----P 204 (386)
T ss_dssp TTEEEEEETTSCCEEEEECSSCSCC-CCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSC-----E
T ss_pred CCcEEEEecCCCCcEEEEeCCCCCc-cEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCC-----C
Confidence 3456677776655444322 2222 122222237899997532 245888888765433322 2222 2
Q ss_pred EEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC--CCCCCCCCceEEE--ECCEEEEEccCCCCccCCC
Q 016328 165 LGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMGGSGENRYTPE 238 (391)
Q Consensus 165 ~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~ 238 (391)
.++++. ++.||+.--. ....++++++....-+.+. .+..| .++++ .+++||+.-... ..
T Consensus 205 ~giavdp~~g~ly~td~~-------~~~~I~r~~~dG~~~~~~~~~~~~~P---nGlavd~~~~~lY~aD~~~-----~~ 269 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDWG-------NTPRIEASSMDGSGRRIIADTHLFWP---NGLTIDYAGRRMYWVDAKH-----HV 269 (386)
T ss_dssp EEEEEETTTTEEEEEECS-------SSCEEEEEETTSCSCEEEECSSCSCE---EEEEEEGGGTEEEEEETTT-----TE
T ss_pred cEEEEEcCCCeEEEeccC-------CCCEEEEEeCCCCCcEEEEECCCCCe---eeEEEeCCCCEEEEEECCC-----CE
Confidence 344554 7899987321 1367999999865443332 22212 23444 378899984321 12
Q ss_pred ccceEeeeecCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCC
Q 016328 239 VDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQ 284 (391)
Q Consensus 239 ~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~ 284 (391)
+..+ ++| ...-+.+.... ..+..++++.++.||+..-.
T Consensus 270 I~~~-----d~d--G~~~~~~~~~~-~~~P~giav~~~~ly~td~~ 307 (386)
T 3v65_B 270 IERA-----NLD--GSHRKAVISQG-LPHPFAITVFEDSLYWTDWH 307 (386)
T ss_dssp EEEE-----CTT--SCSCEEEECSS-CSSEEEEEEETTEEEEEETT
T ss_pred EEEE-----eCC--CCeeEEEEECC-CCCceEEEEECCEEEEeeCC
Confidence 2222 222 11111121111 11234666789999998643
No 243
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=55.13 E-value=1.7e+02 Score=29.20 Aligned_cols=83 Identities=18% Similarity=0.281 Sum_probs=49.5
Q ss_pred CCCCeeeCCCCCCCCCcceEEEEEe-CCEEEEEeCccCCCCC-CCcceeEEEeCCCCceEECCCCCCC----CCCceEEE
Q 016328 146 TDNTWGGRFDMPREMAHSHLGMVTD-GRYIYVVTGQYGPQCR-GPTAHTFVLDTETKKWQDLPPLPVP----RYAPATQL 219 (391)
Q Consensus 146 ~~~~W~~~~~~p~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~-~~~~~~~~yd~~~~~W~~~~~~~~~----r~~~~~~~ 219 (391)
.-.+|+.+..+|. ....+.++.. ++.+|+..+-...... .....+++++-...+|+.+.+.|.. +.+.+...
T Consensus 230 gG~tW~~~~~~p~--~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~ 307 (737)
T 2cn3_A 230 GGVTWKAVPGQPK--GLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLA 307 (737)
T ss_dssp TTSCCEECTTCCC--SSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEE
T ss_pred CCCceEECCCCCC--cccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEE
Confidence 3568999887665 2222333333 7889987543211000 0246799999999999999876542 33333333
Q ss_pred E----CCEEEEEccC
Q 016328 220 W----RGRLHVMGGS 230 (391)
Q Consensus 220 ~----~~~iyv~GG~ 230 (391)
+ .+.||+.+..
T Consensus 308 v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 308 VDRQNPDIIMVTSMN 322 (737)
T ss_dssp ECTTCTTCEEEEEEC
T ss_pred EcCCCCCEEEEEecc
Confidence 3 2568887653
No 244
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=55.11 E-value=1.2e+02 Score=28.26 Aligned_cols=135 Identities=15% Similarity=0.176 Sum_probs=71.4
Q ss_pred CCCCceEE--CCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCcccCCcee-ec-CCCCCCcceeEE
Q 016328 197 TETKKWQD--LPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRT-EI-PIPRGGPHRACV 272 (391)
Q Consensus 197 ~~~~~W~~--~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~-~~p~~~~~~~~~ 272 (391)
...+.|+. ++..|..-..|+.+.+++.=|++|=..++-....+..+-+ -..|+.....-++ ++ ...+.-.-.+.-
T Consensus 267 F~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yf-s~~~~sp~~~vrr~i~sey~~~AsEPCvk 345 (670)
T 3ju4_A 267 FHKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYF-PDAFNSPSNYVRRQIPSEYEPDASEPCIK 345 (670)
T ss_dssp STTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEE-TTTTTCTTCCEEEECCGGGCTTEEEEEEE
T ss_pred eccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEe-cccccCCcceeeeechhhhccccccchhh
Confidence 34566754 4566666777999999988889985544321111111111 0011111111112 22 233333334555
Q ss_pred EECCEEEEEe-CCCCCCCcCCCCCccccCcCCceecCcEEEEc-CcCcEEEcCCCCCCCCCceeeEEEECCEEEEEcccc
Q 016328 273 VVDDRLLVIG-GQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTT 350 (391)
Q Consensus 273 ~~~~~i~v~G-G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~~~~~~~l~i~GG~~ 350 (391)
.+++.||+.- |..+.. +-..+.+-+ ....|+.+. .|....+...-.+.+++.||+||-..
T Consensus 346 yYdgvLyLtTRgt~~~~-----------------~GS~L~rs~d~Gq~w~slr-fp~nvHhtnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 346 YYDGVLYLITRGTRGDR-----------------LGSSLHRSRDIGQTWESLR-FPHNVHHTTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp EETTEEEEEEEESCTTS-----------------CCCEEEEESSTTSSCEEEE-CTTCCCSSCCCEEEETTEEEEEEECS
T ss_pred hhCCEEEEEecCcCCCC-----------------CcceeeeecccCCchhhee-ccccccccCCCcceeCCEEEEEeccc
Confidence 7899999984 333221 112355555 677898873 33332222233478999999997643
No 245
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=52.11 E-value=1.3e+02 Score=26.76 Aligned_cols=130 Identities=6% Similarity=-0.023 Sum_probs=61.0
Q ss_pred eeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC--CCCCC-CCCc
Q 016328 139 HVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVP-RYAP 215 (391)
Q Consensus 139 ~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~-r~~~ 215 (391)
.+.+++..+.+-...................-++..++.++.++.. ...+..+|.......... .+... ..-.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 198 SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK----GIVLTKISIKSGNTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC----CEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc----eeEEeecccccceecceeeeeecCCCCCeE
Confidence 3566666665543322221110111112223578888887765533 245667777666554332 11111 1111
Q ss_pred eEE-EECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCc-ceeEEEE--CCEEEEEeCCCC
Q 016328 216 ATQ-LWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGP-HRACVVV--DDRLLVIGGQEG 286 (391)
Q Consensus 216 ~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~-~~~~~~~--~~~i~v~GG~~~ 286 (391)
+++ .-++++++.|+.+. .+..|+. ++ .+.+..+..+.. ...++.+ ++++++-|+.++
T Consensus 274 ~~~~Spdg~~lasgs~D~-----~V~iwd~-------~~--~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 274 SMDVDMKGELAVLASNDN-----SIALVKL-------KD--LSMSKIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEECTTSCEEEEEETTS-----CEEEEET-------TT--TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred eEEECCCCCceEEEcCCC-----EEEEEEC-------CC--CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 222 23778888887643 4666763 22 223322222111 1123333 678888887653
No 246
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=51.63 E-value=74 Score=27.88 Aligned_cols=141 Identities=4% Similarity=-0.092 Sum_probs=67.7
Q ss_pred CEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEeecC-cccccccccccccccccccCceEEccCCCCC
Q 016328 34 DFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKTKK-DVVPKRILPATFQDLPAPELKWEKMKAAPVP 111 (391)
Q Consensus 34 ~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 111 (391)
+.+|+++... ..+.+||+.+++ ..+... ....++.....+ ..... ...++.+|+.+.+.+.+...+..
T Consensus 61 ~~l~~~d~~~-----~~i~~~d~~~~~~~~~~~~--~~v~~i~~~~dg~l~v~~---~~gl~~~d~~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILE-----RELHELHLASGRKTVHALP--FMGSALAKISDSKQLIAS---DDGLFLRDTATGVLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGG-----TEEEEEETTTTEEEEEECS--SCEEEEEEEETTEEEEEE---TTEEEEEETTTCCEEEEECSSTT
T ss_pred CEEEEEECCC-----CEEEEEECCCCcEEEEECC--CcceEEEEeCCCeEEEEE---CCCEEEEECCCCcEEEEeeCCCC
Confidence 5777776432 368899998877 333221 111222222222 11111 12477888888887766443221
Q ss_pred c--cCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-CC-EEEEEeCccCCCC
Q 016328 112 R--LDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-GR-YIYVVTGQYGPQC 185 (391)
Q Consensus 112 r--~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~ 185 (391)
. .......+ ++++|+.............+++|| +.+.+.+.. . .....+++.. ++ .||+....
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~---~-~~~~~~i~~s~dg~~lyv~~~~----- 199 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA---D-ISIPNSICFSPDGTTGYFVDTK----- 199 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE---E-ESSEEEEEECTTSCEEEEEETT-----
T ss_pred CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC---C-CcccCCeEEcCCCCEEEEEECC-----
Confidence 1 11112222 567777432211112234688888 455544321 0 0111233333 34 67876421
Q ss_pred CCCcceeEEEeCC
Q 016328 186 RGPTAHTFVLDTE 198 (391)
Q Consensus 186 ~~~~~~~~~yd~~ 198 (391)
...+++||..
T Consensus 200 ---~~~I~~~d~~ 209 (326)
T 2ghs_A 200 ---VNRLMRVPLD 209 (326)
T ss_dssp ---TCEEEEEEBC
T ss_pred ---CCEEEEEEcc
Confidence 3578888875
No 247
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=51.30 E-value=1.4e+02 Score=27.15 Aligned_cols=123 Identities=9% Similarity=0.011 Sum_probs=58.8
Q ss_pred cccccccccCceEEccCC-CCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCC-eeeCCCCCCCCCcceEEEE
Q 016328 91 TFQDLPAPELKWEKMKAA-PVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNT-WGGRFDMPREMAHSHLGMV 168 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~~~r~~~~~~ 168 (391)
.+..+|+.++.-..+... ..++ .+...-++.||+...... ..++++|+.++. ...+..++.+.....++++
T Consensus 153 ~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~-----~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~ia 225 (409)
T 3hrp_A 153 RVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGT-----HTVYVYMKASGWAPTRIGQLGSTFSGKIGAVA 225 (409)
T ss_dssp EEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTT-----CEEEEEEGGGTTCEEEEEECCTTSCSCCCBCE
T ss_pred cEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCC-----ceEEEEEcCCCceeEEeeeccchhcCCcEEEE
Confidence 556667665543333221 1111 111111346776643211 158899987543 2233111110011122344
Q ss_pred Ee--CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC---CCCCCCCC-c-eEEEE--CCEEEEEcc
Q 016328 169 TD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP---PLPVPRYA-P-ATQLW--RGRLHVMGG 229 (391)
Q Consensus 169 ~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~r~~-~-~~~~~--~~~iyv~GG 229 (391)
+. ++.||+... ...+++||+.+.....+. ........ . .++.. ++.||+...
T Consensus 226 v~p~~g~lyv~d~---------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 226 LDETEEWLYFVDS---------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp ECTTSSEEEEECT---------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET
T ss_pred EeCCCCeEEEEEC---------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC
Confidence 43 689999421 247899999987755541 11111222 1 44444 588998853
No 248
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=49.63 E-value=1.2e+02 Score=25.87 Aligned_cols=110 Identities=14% Similarity=0.191 Sum_probs=53.5
Q ss_pred ccccccccC-ceEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECC-CCCeeeCCCCCCCCCcceEEEEE
Q 016328 92 FQDLPAPEL-KWEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFT-DNTWGGRFDMPREMAHSHLGMVT 169 (391)
Q Consensus 92 ~~~~d~~~~-~W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~p~~~~r~~~~~~~ 169 (391)
+++||+... .|+... +.. .....+..++.||+... ...+.+||+. ...|+.....+. ..+.+.
T Consensus 80 l~~~d~~g~~~~~~~~--~~~-~~~~~~~~~~~l~v~t~-------~~~l~~~d~~g~~~~~~~~~~~~-----~~~~~~ 144 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDT--KKA-IVSDFTIFEDILYVTSM-------DGHLYAINTDGTEKWRFKTKKAI-----YATPIV 144 (330)
T ss_dssp EEEECCCGGGGGGSCC--------CCEEEETTEEEEECT-------TSEEEEECTTSCEEEEEECSSCC-----CSCCEE
T ss_pred EEEECCCCcEEEEEEC--CCC-cccCceEECCEEEEEec-------CCEEEEEcCCCCEEEEEcCCCce-----eeeeEE
Confidence 677776432 453321 111 11223334888887532 1348889987 335765322111 112233
Q ss_pred e-CCEEEEEeCccCCCCCCCcceeEEEeCCCC-ceEECCCCCCCCCCceEEE-ECCEEEEEc
Q 016328 170 D-GRYIYVVTGQYGPQCRGPTAHTFVLDTETK-KWQDLPPLPVPRYAPATQL-WRGRLHVMG 228 (391)
Q Consensus 170 ~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~r~~~~~~~-~~~~iyv~G 228 (391)
. ++.||+.. . ...+++||+... .|+...+ ... ..+.+. .++.||+..
T Consensus 145 ~~~g~l~vgt-~--------~~~l~~~d~~g~~~~~~~~~--~~~-~~~~~~d~~g~l~v~t 194 (330)
T 3hxj_A 145 SEDGTIYVGS-N--------DNYLYAINPDGTEKWRFKTN--DAI-TSAASIGKDGTIYFGS 194 (330)
T ss_dssp CTTSCEEEEC-T--------TSEEEEECTTSCEEEEEECS--SCC-CSCCEECTTCCEEEES
T ss_pred cCCCEEEEEc-C--------CCEEEEECCCCCEeEEEecC--CCc-eeeeEEcCCCEEEEEe
Confidence 3 67777742 1 256888998722 3655322 222 122333 467777654
No 249
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=49.12 E-value=2.1e+02 Score=28.38 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=63.1
Q ss_pred ceeEEEECCCCCee--eCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCC--c-eEECCCCCCC
Q 016328 138 SHVDIYNFTDNTWG--GRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETK--K-WQDLPPLPVP 211 (391)
Q Consensus 138 ~~~~~yd~~~~~W~--~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~--~-W~~~~~~~~~ 211 (391)
..+++++..+.+-+ .+-..+.. +........ -+++..++...++.. ..++++.+|..+. . |+.+.+-...
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~-~~~~~~~~~SpDG~~l~~~~~~~~~---~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPEL-PKRGHGASVSSDGRWVVITSSEGTD---PVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEECTTC---SCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CEEEEEECCCCchhCEEEeccCCC-CeEEEEEEECCCCCEEEEEEEccCC---CcceEEEEECCCCCCcccEEecCCCCc
Confidence 45888888776522 12111211 112223333 355433333322211 1578999999876 6 8777543322
Q ss_pred CCCceEEEECCEEEEEccCCCCccCCCccceEeeeecCCccc--CCceeecCCCCCCcceeEEEECCEEEEEeCCC
Q 016328 212 RYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLE--KEWRTEIPIPRGGPHRACVVVDDRLLVIGGQE 285 (391)
Q Consensus 212 r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~--~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~~ 285 (391)
... .+...++.||+..-... ..+.+.+. |..+ ..|+.+.+-..... ......++++++....+
T Consensus 319 ~~~-~~~~dg~~l~~~s~~~~-------~~~~l~~~--d~~~~~~~~~~l~~~~~~~l-~~~~~~~~~lv~~~~~d 383 (741)
T 1yr2_A 319 QWD-FVDGVGDQLWFVSGDGA-------PLKKIVRV--DLSGSTPRFDTVVPESKDNL-ESVGIAGNRLFASYIHD 383 (741)
T ss_dssp CEE-EEEEETTEEEEEECTTC-------TTCEEEEE--ECSSSSCEEEEEECCCSSEE-EEEEEEBTEEEEEEEET
T ss_pred eEE-EEeccCCEEEEEECCCC-------CCCEEEEE--eCCCCccccEEEecCCCCeE-EEEEEECCEEEEEEEEC
Confidence 222 22345777777753321 11222222 2333 46877654332221 13344578887776544
No 250
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=48.83 E-value=4.3 Score=37.15 Aligned_cols=51 Identities=8% Similarity=0.034 Sum_probs=25.4
Q ss_pred EEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCc--eEECCCCCCCCCCceEEEECCEEEEEccC
Q 016328 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKK--WQDLPPLPVPRYAPATQLWRGRLHVMGGS 230 (391)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~ 230 (391)
.++.++.||+.+. ...++++|.++.+ |+.-. .. ...+.++.++++|+.++.
T Consensus 5 P~v~~~~v~~gs~---------dg~v~a~d~~tG~~~W~~~~--~~--~~s~p~~~~g~~~v~~s~ 57 (369)
T 2hz6_A 5 VTLPETLLFVSTL---------DGSLHAVSKRTGSIKWTLKE--DP--VLQVPTHVEEPAFLPDPN 57 (369)
T ss_dssp ---CTTEEEEEET---------TSEEEEEETTTCCEEEEEEC--CC--SCCCC-----CCEEECTT
T ss_pred CeeeCCEEEEEcC---------CCEEEEEECCCCCEEEEecC--CC--ceecceEcCCCEEEEeCC
Confidence 3456777777542 2468889987654 87543 11 112234456778887643
No 251
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=48.51 E-value=60 Score=28.14 Aligned_cols=57 Identities=12% Similarity=0.085 Sum_probs=30.3
Q ss_pred eEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEccCC
Q 016328 164 HLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSG 231 (391)
Q Consensus 164 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~ 231 (391)
.|++++.++++|.+|-........+... ......+ ..-..|++++-++++|..|-..
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg~p~~~-------~~~v~~i----~~G~~hs~al~~G~v~~wG~n~ 207 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTTVPAEA-------QSGVDDV----AGGIFHSLALKDGKVIAWGDNR 207 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTSCCGGG-------GSSEEEE----EECSSEEEEEETTEEEEEECCT
T ss_pred CEEEEEECCEEEEecCCCCCCCCCceec-------CCCeEEE----EecCCEEEEEECCeEEEEECCC
Confidence 4566666999999986433221100000 1111211 1223455666789999998543
No 252
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=47.93 E-value=2.4e+02 Score=28.64 Aligned_cols=86 Identities=17% Similarity=0.096 Sum_probs=48.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCC----Ceee-CC-CCCCCCCcceEEEEE--eCCEEEEEeCccCCCCCCCccee
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN----TWGG-RF-DMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHT 192 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~----~W~~-~~-~~p~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~ 192 (391)
+++||++-.. ...+.++++... ..+. +. .+..| .++++ .+++||+.-.. ...+
T Consensus 435 ~~~lY~sD~~------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P-----~GLAvD~~~~~LY~tD~~--------~~~I 495 (791)
T 3m0c_C 435 SNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQAP-----DGLAVDWIHSNIYWTDSV--------LGTV 495 (791)
T ss_dssp TTEEEEEETT------TTEEEEEEC--------CEEEECSSCSCC-----CEEEEETTTTEEEEEETT--------TTEE
T ss_pred CCeeEEeecc------ceeEEEEeccCCCCCcceeEEEecCCCCc-----ceeeeeecCCcEEEEecC--------CCeE
Confidence 5789987542 235777887652 2233 22 23321 23444 47899998421 4678
Q ss_pred EEEeCCCCceEECC--CCCCCCCCceEEE--ECCEEEEEc
Q 016328 193 FVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (391)
Q Consensus 193 ~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~G 228 (391)
+++++....-+.+. .+..|+ ++++ .++.||+.-
T Consensus 496 ~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD 532 (791)
T 3m0c_C 496 SVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 532 (791)
T ss_dssp EEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEE
T ss_pred EEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEec
Confidence 99999876655542 333333 3444 368899884
No 253
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=44.13 E-value=92 Score=26.91 Aligned_cols=17 Identities=6% Similarity=0.020 Sum_probs=11.8
Q ss_pred eEEEEEeCCEEEEEeCc
Q 016328 164 HLGMVTDGRYIYVVTGQ 180 (391)
Q Consensus 164 ~~~~~~~~~~iyv~GG~ 180 (391)
.|++++-++++|.+|-.
T Consensus 73 ~hs~~l~~G~v~~wG~n 89 (282)
T 3qhy_B 73 YHSLALKDGEVIAWGGN 89 (282)
T ss_dssp SEEEEEETTEEEEEECC
T ss_pred CEEEEEECCEEEEeeCC
Confidence 35555568899999854
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=44.03 E-value=1.7e+02 Score=25.92 Aligned_cols=172 Identities=9% Similarity=0.002 Sum_probs=85.7
Q ss_pred ecCEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCceeeEee-cCcccccccccccccccccccCceEEcc--C
Q 016328 32 VADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGENIGVKT-KKDVVPKRILPATFQDLPAPELKWEKMK--A 107 (391)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g~~~~~-~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~ 107 (391)
.++.||+.--. ...+.++++.... ..+.........|+++-- .+...-.+.....+.++++....-+.+. .
T Consensus 83 ~~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~ 157 (349)
T 3v64_C 83 RRELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS 157 (349)
T ss_dssp TTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT
T ss_pred cccEEEEEecc-----CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC
Confidence 35677776432 2357778877665 333221112223444431 2211111112234556665543322221 2
Q ss_pred CCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE--eCCEEEEEeCccCC
Q 016328 108 APVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT--DGRYIYVVTGQYGP 183 (391)
Q Consensus 108 ~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~--~~~~iyv~GG~~~~ 183 (391)
+..|+ ++++- ++.||+.--.. ...+++++++...-+.+..-.. ....++++ .+++||+.-.
T Consensus 158 l~~P~---~iavdp~~g~ly~td~~~-----~~~I~r~~~dG~~~~~~~~~~~---~~PnGla~d~~~~~lY~aD~---- 222 (349)
T 3v64_C 158 LEKPR---AIALHPMEGTIYWTDWGN-----TPRIEASSMDGSGRRIIADTHL---FWPNGLTIDYAGRRMYWVDA---- 222 (349)
T ss_dssp CSCEE---EEEEETTTTEEEEEECSS-----SCEEEEEETTSCSCEESCCSSC---SCEEEEEEETTTTEEEEEET----
T ss_pred CCCcc---eEEEecCcCeEEEeccCC-----CCEEEEEeCCCCCcEEEEECCC---CCcceEEEeCCCCEEEEEEC----
Confidence 22332 23333 67899874211 2469999988655444322111 12235555 4789999832
Q ss_pred CCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEECCEEEEEc
Q 016328 184 QCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWRGRLHVMG 228 (391)
Q Consensus 184 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~G 228 (391)
....++++|+....-+.+..... ..-.++++.++.||+.-
T Consensus 223 ----~~~~I~~~~~dG~~~~~~~~~~~-~~P~giav~~~~ly~td 262 (349)
T 3v64_C 223 ----KHHVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTD 262 (349)
T ss_dssp ----TTTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTEEEEEE
T ss_pred ----CCCEEEEEeCCCCceEEEEeCCC-CCceEEEEECCEEEEec
Confidence 14678999987643332221111 12245666889999985
No 255
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=43.90 E-value=2.5e+02 Score=27.67 Aligned_cols=81 Identities=15% Similarity=0.172 Sum_probs=48.0
Q ss_pred ceeEEEECCCC--CeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCC---ceEECCCCCCCC
Q 016328 138 SHVDIYNFTDN--TWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK---KWQDLPPLPVPR 212 (391)
Q Consensus 138 ~~~~~yd~~~~--~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~r 212 (391)
+.++.+|..+. +|..+..-.. . ....+...+++||+....++ ....++.+|+.+. .|+.+-+-....
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~--~-~~~~~~~~g~~l~~~t~~~~-----~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 330 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLD--A-DVSLVDNKGSTLYLLTNRDA-----PNRRLVTVDAANPGPAHWRDLIPERQQV 330 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSS--S-CEEEEEEETTEEEEEECTTC-----TTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred cEEEEEECCCCCCceEEEeCCCC--c-eEEEEeccCCEEEEEECCCC-----CCCEEEEEeCCCCCccccEEEecCCCCE
Confidence 56899998766 6777643222 1 12224556889999876533 1467889998763 488754322222
Q ss_pred CCceEEEECCEEEEEc
Q 016328 213 YAPATQLWRGRLHVMG 228 (391)
Q Consensus 213 ~~~~~~~~~~~iyv~G 228 (391)
. .....++.|++..
T Consensus 331 -~-~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 331 -L-TVHSGSGYLFAEY 344 (693)
T ss_dssp -E-EEEEETTEEEEEE
T ss_pred -E-EEEEECCEEEEEE
Confidence 2 4445666665553
No 256
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=43.64 E-value=1.4e+02 Score=24.81 Aligned_cols=58 Identities=17% Similarity=0.268 Sum_probs=32.7
Q ss_pred ECCEEEEEeccCCCCCCcceeEEEECCCCCeee--C----CCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeE
Q 016328 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGG--R----FDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTF 193 (391)
Q Consensus 120 ~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~--~----~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 193 (391)
.++++|+|=|. ..|+++.....+.. + +.||. .-.. +...++++|+|=| +.+|
T Consensus 27 ~~g~~yfFkg~--------~~Wr~~~~~~~~~p~~Is~~wpgLP~---~IDA-A~~~~~~~yfFkG----------~~yw 84 (219)
T 1hxn_A 27 NHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQGPS---TVDA-AFSWEDKLYLIQD----------TKVY 84 (219)
T ss_dssp TTSCEEEEETT--------EEEESSSSSCTTCCEEGGGTCTTSCS---SCSE-EEEETTEEEEEET----------TEEE
T ss_pred CCCcEEEEeCC--------EEEEEcCCCCCCCceEhhhhccCCCC---CccE-EEEECCcEEEecC----------CEEE
Confidence 47889999773 35665543322111 1 12332 1222 3334899999955 5688
Q ss_pred EEeCCC
Q 016328 194 VLDTET 199 (391)
Q Consensus 194 ~yd~~~ 199 (391)
+|+..+
T Consensus 85 ~~~~~~ 90 (219)
T 1hxn_A 85 VFLTKG 90 (219)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 898753
No 257
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=41.91 E-value=1.5e+02 Score=25.26 Aligned_cols=55 Identities=7% Similarity=-0.056 Sum_probs=30.8
Q ss_pred ceeEEEECCCCCeeeCCCCCCCCCcceEEEEEe-C-CEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTD-G-RYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
..+++||+.+++.+.+. .. . ...+++.. + ..||+........ ....+++||...+
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~--~-~p~gl~~spdg~~lyv~~~~~~~~---~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DL--D-HPNGLAFSPDEQTLYVSQTPEQGH---GSVEITAFAWRDG 225 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EE--S-SEEEEEECTTSSEEEEEECCC------CCCEEEEEEEETT
T ss_pred CeEEEEcCCCCcEEEEe--cC--C-CCcceEEcCCCCEEEEEecCCcCC---CCCEEEEEEecCC
Confidence 56999999888887754 21 1 12234443 3 3588874321100 0256888887654
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=41.33 E-value=2e+02 Score=25.91 Aligned_cols=116 Identities=12% Similarity=0.038 Sum_probs=61.3
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC--CCCCCCCcceEE
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLG 166 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~r~~~~ 166 (391)
.+..+++.....+.+.+ ....-.+++.. ++.||+.--. ...++++++.....+.+. .+.. + ...+
T Consensus 97 ~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~--p-~gla 165 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVT------LDRILRANLNGSNVEEVVSTGLES--P-GGLA 165 (386)
T ss_dssp CEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEETTSCCEEEEECSSCSC--C-CCEE
T ss_pred cceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCC------CCcEEEEecCCCCcEEEEeCCCCC--c-cEEE
Confidence 34455555554444322 11112233332 5789987421 246899999887665542 2222 1 1223
Q ss_pred EEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC--CCCCCCCCceEEEE--CCEEEEEc
Q 016328 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQLW--RGRLHVMG 228 (391)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~G 228 (391)
+...++.||+.-.. ...+++++++...-+.+. .+..|+ .+++. ++.||+.-
T Consensus 166 vd~~~g~lY~~d~~--------~~~I~~~~~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td 220 (386)
T 3v65_B 166 VDWVHDKLYWTDSG--------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTD 220 (386)
T ss_dssp EETTTTEEEEEETT--------TTEEEECBTTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEE
T ss_pred EEeCCCeEEEEcCC--------CCeEEEEeCCCCceEEeecCCCCCCc---EEEEEcCCCeEEEec
Confidence 32347899998432 457888888765433332 233332 33443 67888874
No 259
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=41.24 E-value=1.2e+02 Score=28.00 Aligned_cols=49 Identities=10% Similarity=0.098 Sum_probs=29.0
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEEEC-CEEEEEcc
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQLWR-GRLHVMGG 229 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~-~~iyv~GG 229 (391)
++.||+.-- ...+.++|+++++.+.+.+ ...+..+-++..+ +.||+...
T Consensus 149 ~g~Lyv~d~---------~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 149 HNHLYLVGE---------QHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITND 198 (430)
T ss_dssp EEEEEEEEB---------TEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEEC
T ss_pred CCeEEEEeC---------CCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeC
Confidence 578999832 1678899999988776643 1111111122223 45998864
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=40.71 E-value=1.5e+02 Score=25.57 Aligned_cols=72 Identities=11% Similarity=0.007 Sum_probs=36.5
Q ss_pred CCEEEEEeccCCCC----CCcceeEEEECCCCCeeeCCCCCCCC-CcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEE
Q 016328 121 KNLLYVFAGYGSID----YVHSHVDIYNFTDNTWGGRFDMPREM-AHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVL 195 (391)
Q Consensus 121 ~~~vyv~GG~~~~~----~~~~~~~~yd~~~~~W~~~~~~p~~~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~y 195 (391)
++.|||........ .....+.+||++.+.-..+. .+... .....+++..+++|||..-. .+.+.+|
T Consensus 239 ~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~-~~~g~~~~~~~~~~~~~g~L~v~~~~--------~~~i~~~ 309 (322)
T 2fp8_A 239 DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP-LPPPFAGEHFEQIQEHDGLLYIGTLF--------HGSVGIL 309 (322)
T ss_dssp TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE-CCTTTTTSCCCEEEEETTEEEEECSS--------CSEEEEE
T ss_pred CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE-CCCCCccccceEEEEeCCEEEEeecC--------CCceEEE
Confidence 45788875431000 01245889998755443332 12110 11223445578999987432 4678888
Q ss_pred eCCCCc
Q 016328 196 DTETKK 201 (391)
Q Consensus 196 d~~~~~ 201 (391)
++..+.
T Consensus 310 ~~~~~~ 315 (322)
T 2fp8_A 310 VYDKKG 315 (322)
T ss_dssp EC----
T ss_pred eccccc
Confidence 876543
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=36.13 E-value=2.3e+02 Score=25.07 Aligned_cols=160 Identities=10% Similarity=0.032 Sum_probs=81.3
Q ss_pred ccccccccccCceEEccC--CCCCccCceEEE--ECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC--CCCCCCCcc
Q 016328 90 ATFQDLPAPELKWEKMKA--APVPRLDGAAIQ--IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHS 163 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~--~p~~r~~~~~~~--~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~r~ 163 (391)
..+.++++....-+.+.. +..| .++++ .++.||+.-.. .+.+++++++...-+.+. .+.. +
T Consensus 95 ~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~l~~--P-- 161 (349)
T 3v64_C 95 DRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEK--P-- 161 (349)
T ss_dssp TEEEEEETTSCSCEEEECSSCSCC---CEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECTTCSC--E--
T ss_pred CceEEEecCCCCceEEEeCCCCCc---cEEEEecCCCeEEEEcCC------CCeEEEEcCCCCceEEEEeCCCCC--c--
Confidence 356666666554443321 2222 23333 36899997532 246899998766433332 2222 2
Q ss_pred eEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCceEEE--ECCEEEEEccCCCCccCCCc
Q 016328 164 HLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEV 239 (391)
Q Consensus 164 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 239 (391)
.++++. ++.||+.--.. ...++++++....-+.+..-... .-.++++ .+++||+.-... ..+
T Consensus 162 -~~iavdp~~g~ly~td~~~-------~~~I~r~~~dG~~~~~~~~~~~~-~PnGla~d~~~~~lY~aD~~~-----~~I 227 (349)
T 3v64_C 162 -RAIALHPMEGTIYWTDWGN-------TPRIEASSMDGSGRRIIADTHLF-WPNGLTIDYAGRRMYWVDAKH-----HVI 227 (349)
T ss_dssp -EEEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEESCCSSCS-CEEEEEEETTTTEEEEEETTT-----TEE
T ss_pred -ceEEEecCcCeEEEeccCC-------CCEEEEEeCCCCCcEEEEECCCC-CcceEEEeCCCCEEEEEECCC-----CEE
Confidence 344554 78999884211 36799999987654444321111 1123444 378899984321 122
Q ss_pred cceEeeeecCCcccCCceeecCCCCCCcceeEEEECCEEEEEeCC
Q 016328 240 DHWSLAVKDGKPLEKEWRTEIPIPRGGPHRACVVVDDRLLVIGGQ 284 (391)
Q Consensus 240 ~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~~~~~~~i~v~GG~ 284 (391)
..++ +|- ..-+.+.... ..+..+.++.++.||+....
T Consensus 228 ~~~~-----~dG--~~~~~~~~~~-~~~P~giav~~~~ly~td~~ 264 (349)
T 3v64_C 228 ERAN-----LDG--SHRKAVISQG-LPHPFAITVFEDSLYWTDWH 264 (349)
T ss_dssp EEEE-----TTS--CSCEEEECSS-CSSEEEEEEETTEEEEEETT
T ss_pred EEEe-----CCC--CceEEEEeCC-CCCceEEEEECCEEEEecCC
Confidence 2222 221 1111221111 12234666789999998654
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=34.95 E-value=2.5e+02 Score=25.11 Aligned_cols=154 Identities=10% Similarity=0.097 Sum_probs=71.6
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-e--ec--CCCCCCCC-ceeeEeecC-cccccccccccccccccccCce--E
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-I--IL--PNNGPQKG-ENIGVKTKK-DVVPKRILPATFQDLPAPELKW--E 103 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~--~l--p~~~~r~~-~g~~~~~~~-~~~~~~~~~~~~~~~d~~~~~W--~ 103 (391)
++.+||.+.+. +..+.+++|.-.. . -+ |....+.+ .|.+..-.+ ...-... ...+++||..+... .
T Consensus 147 ~GnaYVt~s~~----~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v 221 (334)
T 2p9w_A 147 DGNSYVAFALG----MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPE 221 (334)
T ss_dssp TSCEEEEEEES----SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCE
T ss_pred CCCEEEeCCCC----CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceee
Confidence 57888876532 0368889997654 2 11 22223333 344443233 1111122 45677888764332 1
Q ss_pred Ecc--CCCCCccCce---EEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC---CCCCCC-CcceEEEEE----e
Q 016328 104 KMK--AAPVPRLDGA---AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF---DMPREM-AHSHLGMVT----D 170 (391)
Q Consensus 104 ~~~--~~p~~r~~~~---~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~~-~r~~~~~~~----~ 170 (391)
++. .....-.+.. ..-.++++.++.-.. +.+..+-...+ |+... ..|.+. .+...+.++ .
T Consensus 222 ~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~------~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~ 294 (334)
T 2p9w_A 222 PVKINGDFGTLSGTEKIVTVPVGNESVLVGARA------PYAISFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQGS 294 (334)
T ss_dssp ECEESSCCCCCTTEEEEEEEEETTEEEEEEEET------TEEEEEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEETT
T ss_pred cccccCCcccccCcccccccccCCEEEEEEcCC------CCEEEEECCCC-cceeEEeeeecCccccCceeEEEEecccc
Confidence 111 0000001111 223588885554321 22444444444 98742 233321 233334444 5
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
+++||+..++.........++.-.+|+.
T Consensus 295 ~~~iYvv~~~f~~~~~g~r~~f~~~di~ 322 (334)
T 2p9w_A 295 EQGLYAVSAFFDNGAHGGRSDYPLYKLD 322 (334)
T ss_dssp EEEEEEEECCGGGTTTSCCCCEEEEECC
T ss_pred CCeEEEEeeecCCcccCCcceeechhhh
Confidence 7899999876543322223445555553
No 263
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=34.85 E-value=2.4e+02 Score=24.90 Aligned_cols=82 Identities=7% Similarity=-0.103 Sum_probs=41.0
Q ss_pred ceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCC--CC
Q 016328 138 SHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPR--YA 214 (391)
Q Consensus 138 ~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r--~~ 214 (391)
..+.++|+.+.+-........ .-.+++. -++++++.++. ..+.+++..+..-.......... ..
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~----~V~~v~fspdg~~l~s~s~---------~~~~~~~~~~~~~~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRG----EVKDLHFSTDGKVVAYITG---------SSLEVISTVTGSCIARKTDFDKNWSLS 223 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSS----CCCEEEECTTSSEEEEECS---------SCEEEEETTTCCEEEEECCCCTTEEEE
T ss_pred CEEEEeECCCCcEEEEeCCCC----ceEEEEEccCCceEEeccc---------eeEEEEEeccCcceeeeecCCCCCCEE
Confidence 347889988776544221111 1123333 35666666542 34567777766544322221111 11
Q ss_pred ceEEEECCEEEEEccCCC
Q 016328 215 PATQLWRGRLHVMGGSGE 232 (391)
Q Consensus 215 ~~~~~~~~~iyv~GG~~~ 232 (391)
..+..-+++.++.++.+.
T Consensus 224 ~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKK 241 (365)
T ss_dssp EEEEEETTEEEEEEEESS
T ss_pred EEEEcCCCCEEEEEecCC
Confidence 222345788888876543
No 264
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=34.36 E-value=1.9e+02 Score=23.48 Aligned_cols=92 Identities=12% Similarity=0.142 Sum_probs=49.5
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCe-eeCC--CCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTW-GGRF--DMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDT 197 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W-~~~~--~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~ 197 (391)
++++|+|-| +..|+|+..+-.- +.+. .+|.....-..++...++++|+|-| +..++||.
T Consensus 64 ~~~~yfFkG--------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg----------~~ywr~d~ 125 (195)
T 1itv_A 64 SKKLFFFSG--------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG----------RRLWRFDV 125 (195)
T ss_dssp TCCEEEEET--------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET----------TEEEEEET
T ss_pred CCeEEEEeC--------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC----------CEEEEEeC
Confidence 567888877 2366676432110 0111 1222111233333334689999965 56799998
Q ss_pred CCCceEE-----CC-CC-CCCCCCceEEEECCEEEEEccC
Q 016328 198 ETKKWQD-----LP-PL-PVPRYAPATQLWRGRLHVMGGS 230 (391)
Q Consensus 198 ~~~~W~~-----~~-~~-~~~r~~~~~~~~~~~iyv~GG~ 230 (391)
.+++-.. +. .. ..|....++...++.+|.|-|.
T Consensus 126 ~~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 126 KAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp TTTEECGGGCEEHHHHSTTSCSSCSEEEEETTEEEEEETT
T ss_pred CcccccCCCccChhhcCCCCCCCCCEEEEeCCeEEEEeCC
Confidence 7754211 11 11 1223345666678999999774
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=33.72 E-value=3.2e+02 Score=26.34 Aligned_cols=54 Identities=11% Similarity=0.153 Sum_probs=28.6
Q ss_pred eEEEECCEEEEEccCCCCccCCCccceEeeeecCCc--ccCCceeecCCCCCC------cceeEEEECCEEEEEe
Q 016328 216 ATQLWRGRLHVMGGSGENRYTPEVDHWSLAVKDGKP--LEKEWRTEIPIPRGG------PHRACVVVDDRLLVIG 282 (391)
Q Consensus 216 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~~------~~~~~~~~~~~i~v~G 282 (391)
+-++.+++||+..... . ++++|. -+..|+.....+... ...+.++.+++||+..
T Consensus 63 ~P~v~~g~vyv~~~~~------~-------v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t 124 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS------R-------LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT 124 (582)
T ss_dssp CCEEETTEEEEEETTT------E-------EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE
T ss_pred ccEEECCEEEEEcCCC------C-------EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe
Confidence 3457899999986531 1 222233 344587654332210 0123456788888853
No 266
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=32.60 E-value=2.9e+02 Score=27.30 Aligned_cols=102 Identities=7% Similarity=0.047 Sum_probs=58.7
Q ss_pred cccccccccC--c-eEEccCCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCC--CCeeeCCCCCCCCCcceE
Q 016328 91 TFQDLPAPEL--K-WEKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTD--NTWGGRFDMPREMAHSHL 165 (391)
Q Consensus 91 ~~~~~d~~~~--~-W~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~p~~~~r~~~ 165 (391)
.++.+|..+. . |..+........ ..+...++.||+....+.. ...++.+|..+ ..|+.+-+-.. . .-.
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~~~dg~~l~~~s~~~~~---~~~l~~~d~~~~~~~~~~l~~~~~--~-~l~ 367 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLKAQW-DFVDGVGDQLWFVSGDGAP---LKKIVRVDLSGSTPRFDTVVPESK--D-NLE 367 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSSSCE-EEEEEETTEEEEEECTTCT---TCEEEEEECSSSSCEEEEEECCCS--S-EEE
T ss_pred eEEEEECCCCCCcccEEecCCCCceE-EEEeccCCEEEEEECCCCC---CCEEEEEeCCCCccccEEEecCCC--C-eEE
Confidence 5666776655 5 776643222211 1122356788877654322 24589999887 57888643222 1 122
Q ss_pred EEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEEC
Q 016328 166 GMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDL 205 (391)
Q Consensus 166 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~ 205 (391)
.+...+++|++....++ ...++.+|+....-+.+
T Consensus 368 ~~~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 368 SVGIAGNRLFASYIHDA------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEEBTEEEEEEEETT------EEEEEEEETTSCEEEEC
T ss_pred EEEEECCEEEEEEEECC------EEEEEEEeCCCCceeec
Confidence 34555888888765544 56788999765544443
No 267
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=31.77 E-value=1.8e+02 Score=26.51 Aligned_cols=17 Identities=24% Similarity=0.174 Sum_probs=11.8
Q ss_pred CceEEE-ECCEEEEEccC
Q 016328 214 APATQL-WRGRLHVMGGS 230 (391)
Q Consensus 214 ~~~~~~-~~~~iyv~GG~ 230 (391)
.|++++ -++++|..|-.
T Consensus 287 ~hs~alt~~G~v~~wG~n 304 (406)
T 4d9s_A 287 RHTMALTSDGKLYGWGWN 304 (406)
T ss_dssp SEEEEEETTSCEEEEECC
T ss_pred CEEEEEcCCCeEEEeeCC
Confidence 456665 46789999843
No 268
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=31.26 E-value=2.6e+02 Score=24.32 Aligned_cols=78 Identities=8% Similarity=0.065 Sum_probs=47.0
Q ss_pred EeCCEEEEEeCccCCCCCCCcceeEEEeC-CCCceEECCCCCCCCCCceEEEECCEEEEEccCCCCccCCCccceEeeee
Q 016328 169 TDGRYIYVVTGQYGPQCRGPTAHTFVLDT-ETKKWQDLPPLPVPRYAPATQLWRGRLHVMGGSGENRYTPEVDHWSLAVK 247 (391)
Q Consensus 169 ~~~~~iyv~GG~~~~~~~~~~~~~~~yd~-~~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~ 247 (391)
.++++.+|+|-...... ...+.+..|.- ..++|+.++.+...-.-+=.+-+++++ |+||.......+..-.|....|
T Consensus 38 ~~~Gk~~I~GRVE~Rd~-se~S~V~fFeet~~d~w~~v~~~~~~LqDPF~t~I~gEl-i~GGveV~~~~~~~l~wrt~FY 115 (315)
T 2b4w_A 38 SYKGKTHIYGRVEKRDI-WAASHVRLFEETGKDEFTAVPELSWELEDPYIAKINNEM-IFGGTRVRKNGNAILSYYGYFY 115 (315)
T ss_dssp EETTEEEEEEEEECTTC-SSCCEEEEEEEEETTEEEECTTCCBSCEEEEEEEETTEE-EEEEEEEC-----CCCEEEEEE
T ss_pred eECCEEEEEeeeecCCC-ccccEEEEEEEcCCCceEECCCCEEEecCccEEEECCEE-EeeeEEEEeCCCCeeEEEEEEE
Confidence 57888888886644331 12577888876 889999998844444555566788885 5777643322333344444444
Q ss_pred c
Q 016328 248 D 248 (391)
Q Consensus 248 ~ 248 (391)
.
T Consensus 116 r 116 (315)
T 2b4w_A 116 R 116 (315)
T ss_dssp E
T ss_pred c
Confidence 4
No 269
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=31.22 E-value=1.4e+02 Score=25.87 Aligned_cols=103 Identities=14% Similarity=0.102 Sum_probs=50.3
Q ss_pred cccccccccCce-EEccCCCCCccCceEEEECCEEEEEeccCCCCC--C-cceeEEEECCCCCeeeCCCCCCCCCcceEE
Q 016328 91 TFQDLPAPELKW-EKMKAAPVPRLDGAAIQIKNLLYVFAGYGSIDY--V-HSHVDIYNFTDNTWGGRFDMPREMAHSHLG 166 (391)
Q Consensus 91 ~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~~~~vyv~GG~~~~~~--~-~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~ 166 (391)
.++.+|..+.+. ..+.. + .........+.+++.+..+.... . ...++.+| +.+++.+..- . ....
T Consensus 153 ~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~-~----~~~~ 221 (347)
T 2gop_A 153 TFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK-V----SFYA 221 (347)
T ss_dssp EEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE-E----SEEE
T ss_pred eEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccC-c----ceee
Confidence 567777777665 45544 2 22333333333555443332211 1 34688888 6666665321 1 1122
Q ss_pred EEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCC
Q 016328 167 MVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPP 207 (391)
Q Consensus 167 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 207 (391)
. .-+++.+++.+............++.+| +.+++.+..
T Consensus 222 ~-spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 222 V-DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp E-EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESST
T ss_pred E-CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccc
Confidence 2 4455434443332211111246789999 666776643
No 270
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=31.16 E-value=4e+02 Score=26.36 Aligned_cols=138 Identities=7% Similarity=-0.044 Sum_probs=67.2
Q ss_pred cCEEEEecCCCCcccceeEeeecCCCCe-eecCCCCCCCCce-eeEeecC--cccccccccccccccccccCceEEcc--
Q 016328 33 ADFFWASSSKFTSSYLNIASNWSPYHNS-IILPNNGPQKGEN-IGVKTKK--DVVPKRILPATFQDLPAPELKWEKMK-- 106 (391)
Q Consensus 33 ~~~ly~~GG~~~~~~~~~~~~~d~~~~~-~~lp~~~~r~~~g-~~~~~~~--~~~~~~~~~~~~~~~d~~~~~W~~~~-- 106 (391)
++.||++||... -+.+||+.+++ ..+.......... ..++... ..-.+. ..-+.+||+.+++++...
T Consensus 482 ~g~lWi~~~t~~-----Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt--~~Gl~~~~~~~~~~~~~~~~ 554 (758)
T 3ott_A 482 EGNVWVLLYNNK-----GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF--HGGVMRINPKDESQQSISFG 554 (758)
T ss_dssp TSCEEEEETTCS-----SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE--TTEEEEECC--CCCCBCCCC
T ss_pred CCCEEEEccCCC-----CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe--cCceEEEecCCCceEEeccc
Confidence 467888655332 36789999888 5443211110111 1111111 000011 124778888888776552
Q ss_pred CCCCCccCceEEEECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCC
Q 016328 107 AAPVPRLDGAAIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQC 185 (391)
Q Consensus 107 ~~p~~r~~~~~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~ 185 (391)
.+|. ..-.++..-++.|++... +-+.+||+.+.+..... ++. .....++.. -++.|| |||.
T Consensus 555 gl~~-~~i~~i~~~~g~lWi~t~--------~Gl~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~G~l~-fG~~----- 616 (758)
T 3ott_A 555 SFSN-NEILSMTCVKNSIWVSTT--------NGLWIIDRKTMDARQQN-MTN--KRFTSLLFDPKEDCVY-LGGA----- 616 (758)
T ss_dssp C----CCEEEEEEETTEEEEEES--------SCEEEEETTTCCEEEC---CC--CCCSEEEEETTTTEEE-EECB-----
T ss_pred CCCc-cceEEEEECCCCEEEECC--------CCeEEEcCCCceeEEec-CCC--CceeeeEEECCCCcEE-EecC-----
Confidence 2332 112333344678888652 23889999998877643 332 122222222 267776 5663
Q ss_pred CCCcceeEEEeCCC
Q 016328 186 RGPTAHTFVLDTET 199 (391)
Q Consensus 186 ~~~~~~~~~yd~~~ 199 (391)
+-+..|||+.
T Consensus 617 ----~Gl~~f~p~~ 626 (758)
T 3ott_A 617 ----DGFGISHSNL 626 (758)
T ss_dssp ----SEEEEEEC--
T ss_pred ----CceEEEChhh
Confidence 4567899974
No 271
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=30.78 E-value=2.4e+02 Score=24.39 Aligned_cols=67 Identities=9% Similarity=-0.008 Sum_probs=42.0
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEEeCCEEEEEeCccCCCCCCCcceeEEEeCCCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTAHTFVLDTETK 200 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~ 200 (391)
++.+|+++-.. ..+++||+.+++..... ++. .....+..-++++|+... ..+++||+++.
T Consensus 60 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~---~v~~i~~~~dg~l~v~~~----------~gl~~~d~~~g 119 (326)
T 2ghs_A 60 SGTAWWFNILE------RELHELHLASGRKTVHA-LPF---MGSALAKISDSKQLIASD----------DGLFLRDTATG 119 (326)
T ss_dssp TTEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS---CEEEEEEEETTEEEEEET----------TEEEEEETTTC
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEE-CCC---cceEEEEeCCCeEEEEEC----------CCEEEEECCCC
Confidence 36788886432 35899999987655432 222 122222335788887631 34899999988
Q ss_pred ceEECCC
Q 016328 201 KWQDLPP 207 (391)
Q Consensus 201 ~W~~~~~ 207 (391)
+.+.+..
T Consensus 120 ~~~~~~~ 126 (326)
T 2ghs_A 120 VLTLHAE 126 (326)
T ss_dssp CEEEEEC
T ss_pred cEEEEee
Confidence 8876643
No 272
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=30.18 E-value=3.5e+02 Score=25.39 Aligned_cols=70 Identities=16% Similarity=0.129 Sum_probs=39.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCC----CeeeCC---CC--CCCCCcceEEEEEeCCEEEEE--eCccCCCCCCCc
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDN----TWGGRF---DM--PREMAHSHLGMVTDGRYIYVV--TGQYGPQCRGPT 189 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~----~W~~~~---~~--p~~~~r~~~~~~~~~~~iyv~--GG~~~~~~~~~~ 189 (391)
+.++||-|.. .+.++++|..++ +-.+.- .+ +....+.++..+.-++ |||. |+.++.. .
T Consensus 95 r~~l~v~~l~------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~----~ 163 (462)
T 2ece_A 95 RRFLIVPGLR------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEG----P 163 (462)
T ss_dssp SCEEEEEBTT------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCS----C
T ss_pred CCEEEEccCC------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCC----C
Confidence 3467776654 256999998876 222111 01 1111344445555667 8884 3322322 5
Q ss_pred ceeEEEeCCCCc
Q 016328 190 AHTFVLDTETKK 201 (391)
Q Consensus 190 ~~~~~yd~~~~~ 201 (391)
..+..+|.+|.+
T Consensus 164 g~v~vlD~~T~~ 175 (462)
T 2ece_A 164 GGILMLDHYSFE 175 (462)
T ss_dssp CEEEEECTTTCC
T ss_pred CeEEEEECCCCe
Confidence 789999999765
No 273
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=29.90 E-value=3e+02 Score=24.57 Aligned_cols=57 Identities=4% Similarity=-0.132 Sum_probs=31.5
Q ss_pred cCcEEEEc-CcCcEEEcCCCCCCCCCceeeEEEECCE-EEEEccccCCCCcccceeEecceEEEecCccc-ccc
Q 016328 307 YDDVYMLD-DEMKWKVLPSMPKPDSHIEFAWVLVNNS-IVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLV-SAF 377 (391)
Q Consensus 307 ~~~v~~~d-~~~~W~~v~~~~~~~~~~~~~~~~~~~~-l~i~GG~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~ 377 (391)
.++|+.+| .+ .+.+..++.+..-.+. .+..+++ ++++..... +++..+|.++++ ...
T Consensus 297 ~~~V~VID~~t--~~vv~~i~~g~~p~~i-~~s~Dg~~~l~v~~~~~-----------~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 297 AKEVTSVTGLV--GQTSSQISLGHDVDAI-SVAQDGGPDLYALSAGT-----------EVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCeEEEEECCC--CEEEEEEECCCCcCeE-EECCCCCeEEEEEcCCC-----------CeEEEEECCCCCEEee
Confidence 35689997 44 3444444443322222 2445565 544443321 279999999888 444
No 274
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=29.48 E-value=3.4e+02 Score=25.04 Aligned_cols=110 Identities=7% Similarity=-0.058 Sum_probs=57.7
Q ss_pred ecCEEEEecCCCCcccceeEeeecCCCCe--eecCC-CCCCCCceeeEeecC---ccccc-------ccccccccccccc
Q 016328 32 VADFFWASSSKFTSSYLNIASNWSPYHNS--IILPN-NGPQKGENIGVKTKK---DVVPK-------RILPATFQDLPAP 98 (391)
Q Consensus 32 ~~~~ly~~GG~~~~~~~~~~~~~d~~~~~--~~lp~-~~~r~~~g~~~~~~~---~~~~~-------~~~~~~~~~~d~~ 98 (391)
-.+.+|+.-....... +.+..+|+.+++ ..++- ..| ++...-.+ |+... ..-.+.+..+|+.
T Consensus 83 ~~~~vyV~n~~~~~~~-~~VsVID~~t~~vv~~I~vG~~P----gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 83 DARRVYIQDPAHFAAI-TQQFVIDGSTGRILGMTDGGFLP----HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CTTEEEEEECTTTCSS-EEEEEEETTTTEEEEEEEECSSC----EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCEEEEECCCcCCCC-CeEEEEECCCCEEEEEEECCCCC----ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 3467888865322212 799999999998 44443 222 33332222 11110 0123468889998
Q ss_pred cCceEEccCCC-CCcc-----CceEEE--ECCEEEEEeccCCCCCCcceeEEEECCCCCee
Q 016328 99 ELKWEKMKAAP-VPRL-----DGAAIQ--IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG 151 (391)
Q Consensus 99 ~~~W~~~~~~p-~~r~-----~~~~~~--~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~ 151 (391)
+.+-..--+++ .+|. -+.+++ -+.++||..-. ..+.+.++|+.+++=.
T Consensus 158 t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-----~~~~VsVID~~t~kvv 213 (426)
T 3c75_H 158 TFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-----PAPAVGVVDLEGKTFD 213 (426)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-----SSCEEEEEETTTTEEE
T ss_pred CCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-----CCCeEEEEECCCCeEE
Confidence 87543211122 1121 122232 24588887421 1356999999887643
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=29.14 E-value=2.8e+02 Score=23.96 Aligned_cols=114 Identities=16% Similarity=0.081 Sum_probs=59.0
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCC----CCeeeC--CCCCCCCCc
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTD----NTWGGR--FDMPREMAH 162 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~----~~W~~~--~~~p~~~~r 162 (391)
.+..+|..+.....+- +.-..-++++.. +++||+.--. ...+.++|+.+ ..-+.+ ..+.. +
T Consensus 11 ~I~~i~~~~~~~~~~~--~~~~~p~g~~~d~~~~~ly~~D~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~~--p- 79 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQA--P- 79 (316)
T ss_dssp SEEEEETTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETT------TTEEEEEEC--------CEEEECSSCSC--C-
T ss_pred eEEEEECCCcceEehh--cCCCceEEEEEEeCCCEEEEEECC------CCcEEEEECCCCCCCcccEEEEeCCCCC--c-
Confidence 3455566655554432 111222344433 5689998642 24588999876 222222 12222 1
Q ss_pred ceEEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC--CCCCCCCCceEEE--ECCEEEEEc
Q 016328 163 SHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (391)
Q Consensus 163 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~G 228 (391)
.++++ .++.||+.-.. ...++++|+....-+.+. .+..|+ .+++ .++.||+..
T Consensus 80 --~glavd~~~~~ly~~d~~--------~~~I~~~~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d 138 (316)
T 1ijq_A 80 --DGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 138 (316)
T ss_dssp --CEEEEETTTTEEEEEETT--------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEE
T ss_pred --CEEEEeecCCeEEEEECC--------CCEEEEEeCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEc
Confidence 34444 47899998421 467889998765433332 233332 3344 378899875
No 276
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=28.73 E-value=4.5e+02 Score=26.26 Aligned_cols=107 Identities=10% Similarity=0.149 Sum_probs=57.7
Q ss_pred cccCceEEccCCCCCcc---CceEEEE----CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCCCC----------
Q 016328 97 APELKWEKMKAAPVPRL---DGAAIQI----KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMPRE---------- 159 (391)
Q Consensus 97 ~~~~~W~~~~~~p~~r~---~~~~~~~----~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---------- 159 (391)
-...+|+++..++..+. +.....+ .+.||+.....+ .+++=+-.-.+|+.+...|..
T Consensus 162 DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g------~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~ 235 (763)
T 3a0f_A 162 DRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG------GLWVTWDGGANWSQVGGQPTQWSDWTKSIVA 235 (763)
T ss_dssp STTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT------CEEEESSSSSSCEECTTCCCSCCHHHHHHHH
T ss_pred CCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC------eEEEECCCCCCccccCCCccccccccccccc
Confidence 34468999887664322 2222333 246777653211 233333335689998755521
Q ss_pred --------CCcceEEEEEe-CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCC
Q 016328 160 --------MAHSHLGMVTD-GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP 209 (391)
Q Consensus 160 --------~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~ 209 (391)
.....+.+++. ++.+|+...............+++.+-...+|+.+.+.+
T Consensus 236 p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~ 294 (763)
T 3a0f_A 236 ASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSR 294 (763)
T ss_dssp HHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTS
T ss_pred cccccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCC
Confidence 11222333332 678888742110000011467899999999999987654
No 277
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=28.19 E-value=4.8e+02 Score=26.36 Aligned_cols=133 Identities=12% Similarity=0.040 Sum_probs=71.1
Q ss_pred ECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC--CCCCCCCcceEEEEE--eCCEEEEEeCccCCCCCCCcceeEEE
Q 016328 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVL 195 (391)
Q Consensus 120 ~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~y 195 (391)
++++||+.-.. ...|+++++....-+.+. .+.. + .++++ .++.||+.--. ....++++
T Consensus 481 ~~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~~l~~--P---~gIaVDp~~g~LYwtD~g-------~~~~I~~~ 542 (791)
T 3m0c_C 481 IHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSK--P---RAIVVDPVHGFMYWTDWG-------TPAKIKKG 542 (791)
T ss_dssp TTTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCC--E---EEEEEETTTTEEEEEECS-------SSCEEEEE
T ss_pred cCCcEEEEecC------CCeEEEEeCCCCeEEEEEeCCCCC--c---ceEEEecCCCCEEEecCC-------CCCeEEEE
Confidence 36799997432 346999999876655442 2322 2 34555 46899998410 13678999
Q ss_pred eCCCCceEECC--CCCCCCCCceEEE--ECCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCcceeE
Q 016328 196 DTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRAC 271 (391)
Q Consensus 196 d~~~~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~ 271 (391)
++....-+.+. .+..| .++++ .+++||+.-.. ...++.++ +|- ......+.....-.+.++.
T Consensus 543 ~~dG~~~~~lv~~~l~~P---~GLavD~~~~~LYwaD~~-----~~~I~~~d-----~dG-~~~~~v~~~~~~l~~P~gl 608 (791)
T 3m0c_C 543 GLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSID-----VNG-GNRKTILEDEKRLAHPFSL 608 (791)
T ss_dssp ETTSCCEEEEECSSCSCE---EEEEEETTTTEEEEEETT-----TTEEEEEE-----TTS-CSCEEEEECTTTTSSEEEE
T ss_pred ecCCCceEEEEeCCCCCc---eEEEEecCCCeEEEEeCC-----CCcEEEEe-----cCC-CceEEEecCCCccCCCCEE
Confidence 98766544432 22222 23343 37899998422 12233222 111 1122222211111234477
Q ss_pred EEECCEEEEEeCC
Q 016328 272 VVVDDRLLVIGGQ 284 (391)
Q Consensus 272 ~~~~~~i~v~GG~ 284 (391)
++.+++||+.-..
T Consensus 609 av~~~~lYwtD~~ 621 (791)
T 3m0c_C 609 AVFEDKVFWTDII 621 (791)
T ss_dssp EEETTEEEEEETT
T ss_pred EEeCCEEEEEECC
Confidence 7889999998754
No 278
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=27.91 E-value=2.6e+02 Score=23.20 Aligned_cols=114 Identities=11% Similarity=0.123 Sum_probs=60.1
Q ss_pred cCceEEccCCCCCccCceEEE--ECCEEEEEeccCCCCCCcceeEEEECCCC----Ceee--------CCCCCCCCCcce
Q 016328 99 ELKWEKMKAAPVPRLDGAAIQ--IKNLLYVFAGYGSIDYVHSHVDIYNFTDN----TWGG--------RFDMPREMAHSH 164 (391)
Q Consensus 99 ~~~W~~~~~~p~~r~~~~~~~--~~~~vyv~GG~~~~~~~~~~~~~yd~~~~----~W~~--------~~~~p~~~~r~~ 164 (391)
+..|..|+..+......-++. .++++|+|-| +..|+||..++ .... .+.+|...-...
T Consensus 46 ~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg--------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~ 117 (225)
T 3oyo_A 46 SSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG--------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDS 117 (225)
T ss_dssp HHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET--------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSC
T ss_pred hhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC--------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccc
Confidence 346766654333223333333 4789999987 34788865322 1111 112221000002
Q ss_pred EEEEE---eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC-----CCC------CCCCCceEEE--ECCEEEEEc
Q 016328 165 LGMVT---DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP-----PLP------VPRYAPATQL--WRGRLHVMG 228 (391)
Q Consensus 165 ~~~~~---~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~-----~~~------~~r~~~~~~~--~~~~iyv~G 228 (391)
.-+|. .++++|+|-| +..|+||..+++...-| ..| .+..--++.. .++++|+|=
T Consensus 118 IDAA~~~~~~gk~yfFkG----------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFk 187 (225)
T 3oyo_A 118 IDSAFRSTKGKEVYLFKG----------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFK 187 (225)
T ss_dssp CCEEEECSSTTEEEEEET----------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEE
T ss_pred cceEEEECCCCcEEEEeC----------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEE
Confidence 22332 3689999965 56899997776654311 122 1333445555 378999997
Q ss_pred cC
Q 016328 229 GS 230 (391)
Q Consensus 229 G~ 230 (391)
|.
T Consensus 188 G~ 189 (225)
T 3oyo_A 188 GQ 189 (225)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 279
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=27.35 E-value=1.1e+02 Score=28.15 Aligned_cols=71 Identities=8% Similarity=0.135 Sum_probs=41.9
Q ss_pred CCEEEEEeccC---CCCCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCC--EEEEEeCccCCCCCCCcceeEE
Q 016328 121 KNLLYVFAGYG---SIDYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGR--YIYVVTGQYGPQCRGPTAHTFV 194 (391)
Q Consensus 121 ~~~vyv~GG~~---~~~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~~~~ 194 (391)
++++||.-+.. ......++++++|..+.+-..- ++.+ ....++++ -++ .||+.-+. .+++..
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~--i~vg--~~~~~lavs~D~~~~ly~tn~~--------~~~VsV 358 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK--FEMG--HEIDSINVSQDEKPLLYALSTG--------DKTLYI 358 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE--EEEE--EEECEEEECSSSSCEEEEEETT--------TTEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE--EECC--CCcceEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 56999974322 1122346799999988765442 2221 12223444 343 57776432 477899
Q ss_pred EeCCCCceE
Q 016328 195 LDTETKKWQ 203 (391)
Q Consensus 195 yd~~~~~W~ 203 (391)
||..+.+-.
T Consensus 359 iD~~t~k~~ 367 (386)
T 3sjl_D 359 HDAESGEEL 367 (386)
T ss_dssp EETTTCCEE
T ss_pred EECCCCcEE
Confidence 999987743
No 280
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=27.31 E-value=3.6e+02 Score=24.64 Aligned_cols=94 Identities=9% Similarity=-0.033 Sum_probs=48.9
Q ss_pred ccccccccccCceEEccCCCCCccCceEEEE---CCEEEEEeccCCCCCCcceeEEEECCCCCee---eCCCCCCCCCcc
Q 016328 90 ATFQDLPAPELKWEKMKAAPVPRLDGAAIQI---KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWG---GRFDMPREMAHS 163 (391)
Q Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~---~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~---~~~~~p~~~~r~ 163 (391)
..+..+|+..+..+.+.. .. .......+ ++.||+....... ....+..++.. ..|. .++.+..
T Consensus 159 ~~I~~id~~~~~v~~~~~-~~--~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~~-g~~~~~~~l~~~~~----- 227 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS-GL--SKVRTICWTHEADSMIITNDQNNN--DRPNNYILTRE-SGFKVITELTKGQN----- 227 (430)
T ss_dssp EEEEEEETTTTEEEEEEC-CC--SCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEGG-GTSCSEEEEEECSS-----
T ss_pred CcEEEEECCCCEEEEEec-CC--CCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeCC-CceeeeeeeccCCC-----
Confidence 356677776666555433 11 11222222 3458988643321 12236666654 3343 2322322
Q ss_pred eEEEEEe--CCEEEEEeCccCCCCCCCcceeEEEeCCCCce
Q 016328 164 HLGMVTD--GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKW 202 (391)
Q Consensus 164 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W 202 (391)
.+.+++. ++.||+.--. ...+++||+.+..-
T Consensus 228 p~giavdp~~g~lyv~d~~--------~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWN--------AGQVFRYDFTTQET 260 (430)
T ss_dssp CCCEEECTTTCCEEEEETT--------TTEEEEEETTTTEE
T ss_pred ceEEEEeCCCCEEEEEECC--------CCEEEEEECCCCcE
Confidence 2344443 6789987321 46799999987765
No 281
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=26.96 E-value=2.7e+02 Score=22.99 Aligned_cols=15 Identities=13% Similarity=0.251 Sum_probs=11.8
Q ss_pred eEEEECCEEEEEccC
Q 016328 216 ATQLWRGRLHVMGGS 230 (391)
Q Consensus 216 ~~~~~~~~iyv~GG~ 230 (391)
|++..++++|+|=|.
T Consensus 35 Ai~~~~g~~~fFkg~ 49 (218)
T 1gen_A 35 GIAQIRGEIFFFKDR 49 (218)
T ss_dssp EEEEETTEEEEEETT
T ss_pred EEEeCCCcEEEEECC
Confidence 556689999999774
No 282
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=26.73 E-value=2.2e+02 Score=25.51 Aligned_cols=69 Identities=10% Similarity=0.094 Sum_probs=37.4
Q ss_pred CCEEEEEeccCCC---CCCcceeEEEECCCCCeeeCCCCCCCCCcceEEEEE-eCC--EEEEEeCccCCCCCCCcceeEE
Q 016328 121 KNLLYVFAGYGSI---DYVHSHVDIYNFTDNTWGGRFDMPREMAHSHLGMVT-DGR--YIYVVTGQYGPQCRGPTAHTFV 194 (391)
Q Consensus 121 ~~~vyv~GG~~~~---~~~~~~~~~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~~~~ 194 (391)
++++||....... ....++++++|..+.+=.. .++.+ .....+++ -++ .+|+.... .+++..
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~--~i~~g--~~p~~i~~s~Dg~~~l~v~~~~--------~~~V~V 345 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS--QISLG--HDVDAISVAQDGGPDLYALSAG--------TEVLHI 345 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEE--EEECC--CCcCeEEECCCCCeEEEEEcCC--------CCeEEE
Confidence 4689997542111 1124579999998765422 22332 11223333 344 45654321 477899
Q ss_pred EeCCCCc
Q 016328 195 LDTETKK 201 (391)
Q Consensus 195 yd~~~~~ 201 (391)
+|..+.+
T Consensus 346 iD~~t~~ 352 (373)
T 2mad_H 346 YDAGAGD 352 (373)
T ss_pred EECCCCC
Confidence 9988755
No 283
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=25.93 E-value=1.3e+02 Score=25.18 Aligned_cols=91 Identities=10% Similarity=0.095 Sum_probs=49.8
Q ss_pred EECCEEEEEeccCCCCCCcceeEEEE--CC-------------CCCeeeCCCC--CCCCCcceEEEEE-eCCEEEEEeCc
Q 016328 119 QIKNLLYVFAGYGSIDYVHSHVDIYN--FT-------------DNTWGGRFDM--PREMAHSHLGMVT-DGRYIYVVTGQ 180 (391)
Q Consensus 119 ~~~~~vyv~GG~~~~~~~~~~~~~yd--~~-------------~~~W~~~~~~--p~~~~r~~~~~~~-~~~~iyv~GG~ 180 (391)
..++++|+|-|. .+|+|+ +. +..|..++.. |. .-..+... .++++|+|-|
T Consensus 70 ~~~g~~~fFKg~--------~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~---~IDAA~~~~~~~k~yfFkG- 137 (227)
T 3lp9_A 70 TENNEAFIFYEN--------FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFES---GIDAAYRSTRGKEVYLFKG- 137 (227)
T ss_dssp CSTTEEEEEETT--------EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTT---CCSEEEECSSTTEEEEEET-
T ss_pred CCCCEEEEEeCC--------EEEEEeCCCCccccccccCceEHhhhcCCCCCccCCC---cccEEEEECCCCEEEEEEC-
Confidence 357899999873 477777 21 1224443211 22 22223222 2689999965
Q ss_pred cCCCCCCCcceeEEEeCCCCceEE-----CC-CCCC------CCCCceEEE--ECCEEEEEccC
Q 016328 181 YGPQCRGPTAHTFVLDTETKKWQD-----LP-PLPV------PRYAPATQL--WRGRLHVMGGS 230 (391)
Q Consensus 181 ~~~~~~~~~~~~~~yd~~~~~W~~-----~~-~~~~------~r~~~~~~~--~~~~iyv~GG~ 230 (391)
+..|+||..+++-.. +. .+|. +..--++.. .++++|+|=|.
T Consensus 138 ---------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~ 192 (227)
T 3lp9_A 138 ---------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD 192 (227)
T ss_dssp ---------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT
T ss_pred ---------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC
Confidence 568999987653211 11 1221 123334444 36899999764
No 284
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=25.55 E-value=2.8e+02 Score=22.82 Aligned_cols=92 Identities=15% Similarity=0.212 Sum_probs=48.9
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCC--e-eeCCC--CCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEE
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNT--W-GGRFD--MPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFV 194 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~--W-~~~~~--~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~ 194 (391)
++++|+|-| +..|+||-.+-. + +.+.. +|....+-..+... .++++|+|-| +..++
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG----------~~ywr 148 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG----------DKFWR 148 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET----------TEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC----------CEEEE
Confidence 579999977 348888842110 0 01111 22211122222221 3689999965 56899
Q ss_pred EeCCCCceEEC-----C-C-CCCCCCCceEEEEC--CEEEEEccC
Q 016328 195 LDTETKKWQDL-----P-P-LPVPRYAPATQLWR--GRLHVMGGS 230 (391)
Q Consensus 195 yd~~~~~W~~~-----~-~-~~~~r~~~~~~~~~--~~iyv~GG~ 230 (391)
||..+++-..- . . +..|....++...+ +++|+|=|.
T Consensus 149 ~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 149 YNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp EETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEETT
T ss_pred EECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEECC
Confidence 99877642211 1 0 11233344555554 899999664
No 285
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=25.27 E-value=2.2e+02 Score=29.58 Aligned_cols=81 Identities=15% Similarity=0.021 Sum_probs=43.8
Q ss_pred ceeE-EEECCCCCeeeCCCCCCCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCCCCCCCc
Q 016328 138 SHVD-IYNFTDNTWGGRFDMPREMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLPVPRYAP 215 (391)
Q Consensus 138 ~~~~-~yd~~~~~W~~~~~~p~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 215 (391)
..++ +||..+.+-..+. .. ......++. -+++.++++.. ...++.+|+.+.+-..+..-.......
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~~--~~~~~~~~~SpDG~~la~~~~--------~~~v~~~d~~tg~~~~~~~~~~~~v~~ 425 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--EN--LGNVFAMGVDRNGKFAVVAND--------RFEIMTVDLETGKPTVIERSREAMITD 425 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--CC--CCSEEEEEECTTSSEEEEEET--------TSEEEEEETTTCCEEEEEECSSSCCCC
T ss_pred CceEEEEECCCCCceEec--CC--ccceeeeEECCCCCEEEEECC--------CCeEEEEECCCCceEEeccCCCCCccc
Confidence 3588 8999888766654 22 112223333 35555555542 247889999988766553222222222
Q ss_pred eEEEECCEEEEEccC
Q 016328 216 ATQLWRGRLHVMGGS 230 (391)
Q Consensus 216 ~~~~~~~~iyv~GG~ 230 (391)
.+..-+++.+++++.
T Consensus 426 ~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 426 FTISDNSRFIAYGFP 440 (1045)
T ss_dssp EEECTTSCEEEEEEE
T ss_pred eEECCCCCeEEEEec
Confidence 233346665566543
No 286
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=24.56 E-value=3.7e+02 Score=23.89 Aligned_cols=60 Identities=10% Similarity=0.163 Sum_probs=31.4
Q ss_pred CCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECCCCC-CCCCCceEEE-ECCEEEEEccCCCCccCCCccceE
Q 016328 171 GRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLPPLP-VPRYAPATQL-WRGRLHVMGGSGENRYTPEVDHWS 243 (391)
Q Consensus 171 ~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 243 (391)
++.+++.|+.+ ..+..||+.+.+-...-..+ ....-.+++. -++++++.|+.++ .+..|+
T Consensus 181 ~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd 242 (437)
T 3gre_A 181 EKSLLVALTNL--------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWD 242 (437)
T ss_dssp SCEEEEEEETT--------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEE
T ss_pred CCCEEEEEeCC--------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEE
Confidence 46777777653 46788998876532211111 1111112222 2567777777653 355665
No 287
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=24.54 E-value=2.9e+02 Score=25.04 Aligned_cols=26 Identities=15% Similarity=0.111 Sum_probs=15.0
Q ss_pred ceehhHHHHHHHHhhee-cCEEEEecC
Q 016328 16 ARVVLSIFVMILGFALV-ADFFWASSS 41 (391)
Q Consensus 16 ~~~~~~~~~~~~~~~~~-~~~ly~~GG 41 (391)
.+++--.|-..|.+++. ++.+|..|-
T Consensus 16 ~~v~~ia~G~~hs~al~~~g~v~~wG~ 42 (406)
T 4d9s_A 16 RKVLIISAGASHSVALLSGDIVCSWGR 42 (406)
T ss_dssp CCEEEEEECSSEEEEEETTTEEEEEEC
T ss_pred cceEEEecCCCeEEEEEeCCEEEEEeC
Confidence 34433344556666665 667777774
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=22.90 E-value=4.2e+02 Score=23.87 Aligned_cols=132 Identities=12% Similarity=0.038 Sum_probs=69.7
Q ss_pred ECCEEEEEeccCCCCCCcceeEEEECCCCCeeeCC--CCCCCCCcceEEEEE--eCCEEEEEeCccCCCCCCCcceeEEE
Q 016328 120 IKNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRF--DMPREMAHSHLGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVL 195 (391)
Q Consensus 120 ~~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~y 195 (391)
+++.||++-.. ...++++|++...-+.+. .+.. + .++++ .++.||+.--. ....++++
T Consensus 169 ~~~~lY~~d~~------~~~I~~~~~~g~~~~~l~~~~~~~--P---~~iavdp~~g~ly~td~~-------~~~~I~~~ 230 (400)
T 3p5b_L 169 IHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSK--P---RAIVVDPVHGFMYWTDWG-------TPAKIKKG 230 (400)
T ss_dssp TTTEEEEEETT------TTEEEEECTTTCSEEEEEECSSCC--E---EEEEEETTTTEEEEEECS-------SSCCEEEE
T ss_pred cCCceEEEECC------CCeEEEEeCCCCceEEEEeCCCCC--c---ceEEEecccCeEEEEeCC-------CCCEEEEE
Confidence 37899998532 246889998876654432 2222 2 34555 47899987411 02568899
Q ss_pred eCCCCceEEC-C-CCCCCCCCceEEEE--CCEEEEEccCCCCccCCCccceEeeeecCCcccCCceeecCCCCCCcceeE
Q 016328 196 DTETKKWQDL-P-PLPVPRYAPATQLW--RGRLHVMGGSGENRYTPEVDHWSLAVKDGKPLEKEWRTEIPIPRGGPHRAC 271 (391)
Q Consensus 196 d~~~~~W~~~-~-~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~~~~~~~ 271 (391)
++....=+.+ . .+..| .++++- +++||+.-.. ...+..++ +|- ......+.....-.+..+.
T Consensus 231 ~~dG~~~~~~~~~~l~~P---~glavd~~~~~lY~aD~~-----~~~I~~~d-----~dG-~~~~~~~~~~~~l~~P~gl 296 (400)
T 3p5b_L 231 GLNGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSID-----VNG-GNRKTILEDEKRLAHPFSL 296 (400)
T ss_dssp ETTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEETT-----TTEEEEEE-----TTS-CCCEEEEECSSTTSSEEEE
T ss_pred eCCCCccEEEEECCCCce---EEEEEEeCCCEEEEEECC-----CCEEEEEe-----CCC-CccEEEEeCCCCCCCCEEE
Confidence 9876543332 1 22222 234443 6889998422 11233222 221 1222222211112234477
Q ss_pred EEECCEEEEEeC
Q 016328 272 VVVDDRLLVIGG 283 (391)
Q Consensus 272 ~~~~~~i~v~GG 283 (391)
++.++.||+.--
T Consensus 297 ~v~~~~lywtd~ 308 (400)
T 3p5b_L 297 AVFEDKVFWTDI 308 (400)
T ss_dssp EEETTEEEEEES
T ss_pred EEeCCEEEEecC
Confidence 788999999874
No 289
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=21.89 E-value=3.4e+02 Score=22.41 Aligned_cols=94 Identities=15% Similarity=0.217 Sum_probs=49.3
Q ss_pred EEEECCEEEEEeccCCCCCCcceeEEEECCCC-Cee-----eCC---CCCCCCCcceEEEEE---eCCEEEEEeCccCCC
Q 016328 117 AIQIKNLLYVFAGYGSIDYVHSHVDIYNFTDN-TWG-----GRF---DMPREMAHSHLGMVT---DGRYIYVVTGQYGPQ 184 (391)
Q Consensus 117 ~~~~~~~vyv~GG~~~~~~~~~~~~~yd~~~~-~W~-----~~~---~~p~~~~r~~~~~~~---~~~~iyv~GG~~~~~ 184 (391)
+...++++|+|-| +..|+|+..++ +=. .+. .+|........-+|+ .++++|+|-|
T Consensus 68 A~~~~~~~yfFkG--------~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG----- 134 (219)
T 1hxn_A 68 AFSWEDKLYLIQD--------TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG----- 134 (219)
T ss_dssp EEEETTEEEEEET--------TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-----
T ss_pred EEEECCcEEEecC--------CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-----
Confidence 3345899999976 34888886531 111 011 122210011122333 2579999965
Q ss_pred CCCCcceeEEEeCCCC---ceEECCCCCCCCCCceEEE------------ECCEEEEEccC
Q 016328 185 CRGPTAHTFVLDTETK---KWQDLPPLPVPRYAPATQL------------WRGRLHVMGGS 230 (391)
Q Consensus 185 ~~~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~------------~~~~iyv~GG~ 230 (391)
+..|+||..+. .|...+-+ +..-.++.. .++.+|+|=|.
T Consensus 135 -----~~ywr~d~~~~P~~i~~~~~g~--p~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg~ 188 (219)
T 1hxn_A 135 -----RRLWWLDLKSGAQATWTELPWP--HEKVDGALCMEKPLGPNSCSTSGPNLYLIHGP 188 (219)
T ss_dssp -----TEEEEEEGGGGGGCCCEEECCS--CSCCSEEEEESSCSSSCCSCSSSCEEEEEETT
T ss_pred -----CEEEEEeCCCCceEhhhcCCCC--CCCcCEEEEccccccccceeccCCeEEEEECC
Confidence 56789997542 34433322 222233333 34679998764
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=20.94 E-value=4.6e+02 Score=23.59 Aligned_cols=116 Identities=14% Similarity=0.039 Sum_probs=59.0
Q ss_pred cccccccccCceEEccCCCCCccCceEEEE--CCEEEEEeccCCCCCCcceeEEEECCCC----CeeeCCCCCCCCCcce
Q 016328 91 TFQDLPAPELKWEKMKAAPVPRLDGAAIQI--KNLLYVFAGYGSIDYVHSHVDIYNFTDN----TWGGRFDMPREMAHSH 164 (391)
Q Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~vyv~GG~~~~~~~~~~~~~yd~~~~----~W~~~~~~p~~~~r~~ 164 (391)
.+..++.....++.+.+ ..+.-.+++.. ++.||+.--. ...+.++++... ..+.+..-.. ...
T Consensus 93 ~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~------~~~I~~~~~~g~~~~~~~~~~~~~~~---~~p 161 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDI---QAP 161 (400)
T ss_dssp EEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETT------TTEEEEEEC------CCCEEEECSSC---SCE
T ss_pred eeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecC------CCeEEEEEcccCCCCCcceEEEeCCC---CCc
Confidence 34445555555544321 11222333333 5789987432 245888888752 2222211111 122
Q ss_pred EEEEE--eCCEEEEEeCccCCCCCCCcceeEEEeCCCCceEECC--CCCCCCCCceEEE--ECCEEEEEc
Q 016328 165 LGMVT--DGRYIYVVTGQYGPQCRGPTAHTFVLDTETKKWQDLP--PLPVPRYAPATQL--WRGRLHVMG 228 (391)
Q Consensus 165 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~G 228 (391)
.++++ .++.||+.-.. ...++++|++...-+.+. .+..|+ .+++ .++.||+.-
T Consensus 162 ~glavD~~~~~lY~~d~~--------~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td 220 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTD 220 (400)
T ss_dssp EEEEEETTTTEEEEEETT--------TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEE
T ss_pred ccEEEEecCCceEEEECC--------CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEe
Confidence 34454 47899998432 467889999877655442 333332 3344 368899874
No 291
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=20.11 E-value=4.6e+02 Score=23.26 Aligned_cols=66 Identities=11% Similarity=0.013 Sum_probs=37.4
Q ss_pred CCEEEEEeccCCCCCCcceeEEEECCCCCeeeCCCCC-CCCCcceEEEEE-eCCEEEEEeCccCCCCCCCcceeEEEeCC
Q 016328 121 KNLLYVFAGYGSIDYVHSHVDIYNFTDNTWGGRFDMP-REMAHSHLGMVT-DGRYIYVVTGQYGPQCRGPTAHTFVLDTE 198 (391)
Q Consensus 121 ~~~vyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~yd~~ 198 (391)
++.+++.|+.+ ..+.+||+.+.+-...-..+ . ...-.+++. -++.+++.|+.+ ..+..||..
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~ 244 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPR--HGAVSSICIDEECCVLILGTTR--------GIIDIWDIR 244 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGG--GCCEEEEEECTTSCEEEEEETT--------SCEEEEETT
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCC--CCceEEEEECCCCCEEEEEcCC--------CeEEEEEcC
Confidence 46777777764 35889999876543321111 1 111223333 256777777754 346788988
Q ss_pred CCce
Q 016328 199 TKKW 202 (391)
Q Consensus 199 ~~~W 202 (391)
+.+.
T Consensus 245 ~~~~ 248 (437)
T 3gre_A 245 FNVL 248 (437)
T ss_dssp TTEE
T ss_pred CccE
Confidence 7543
Done!