BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016330
(391 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol
pdb|1CGK|A Chain A, Chalcone Synthase From Alfalfa Complexed With Naringenin
Length = 389
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/389 (77%), Positives = 336/389 (86%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa
pdb|1D6F|A Chain A, Chalcone Synthase C164a Mutant
Length = 389
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/389 (77%), Positives = 335/389 (86%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
pdb|1CHW|B Chain B, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
Length = 389
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/389 (77%), Positives = 335/389 (86%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGSFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa
Length = 389
Score = 639 bits (1649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 302/389 (77%), Positives = 335/389 (86%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant
Length = 389
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/389 (77%), Positives = 334/389 (85%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAID HLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDAHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A
Length = 388
Score = 637 bits (1644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/387 (77%), Positives = 334/387 (86%)
Query: 3 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDK 62
+V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMCDK
Sbjct: 2 SVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDK 61
Query: 63 SMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKS 122
SMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKS
Sbjct: 62 SMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKS 121
Query: 123 KITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 182
KITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAENNK
Sbjct: 122 KITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNK 181
Query: 183 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVST 242
GARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V T
Sbjct: 182 GARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWT 241
Query: 243 SQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIA 302
+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFWIA
Sbjct: 242 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 301
Query: 303 HPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTG 362
HPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + TTG
Sbjct: 302 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 361
Query: 363 EGLDWGVLFGFGPGLTVETVVLHSVPI 389
EGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 362 EGLEWGVLFGFGPGLTIETVVLRSVAI 388
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant
Length = 389
Score = 636 bits (1640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/389 (77%), Positives = 334/389 (85%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQAL P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALSGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f)
pdb|1I8B|B Chain B, Chalcone Synthase (g256f)
Length = 389
Score = 636 bits (1640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/389 (77%), Positives = 334/389 (85%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAID HLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDFHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1I88|A Chain A, Chalcone Synthase (G256v)
pdb|1I88|B Chain B, Chalcone Synthase (G256v)
Length = 389
Score = 636 bits (1640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/389 (77%), Positives = 334/389 (85%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAID HLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1I89|A Chain A, Chalcone Synthase (G256l)
pdb|1I89|B Chain B, Chalcone Synthase (G256l)
Length = 389
Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/389 (77%), Positives = 334/389 (85%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQP
Sbjct: 61 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAEN
Sbjct: 121 KSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 181 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAID HLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 241 WTAQTIAPDSEGAIDLHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 301 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant)
pdb|1D6I|B Chain B, Chalcone Synthase (H303q Mutant)
Length = 388
Score = 635 bits (1637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/387 (77%), Positives = 333/387 (86%)
Query: 3 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDK 62
+V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMCDK
Sbjct: 2 SVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDK 61
Query: 63 SMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKS 122
SMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKS
Sbjct: 62 SMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKS 121
Query: 123 KITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 182
KITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAENNK
Sbjct: 122 KITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNK 181
Query: 183 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVST 242
GARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V T
Sbjct: 182 GARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWT 241
Query: 243 SQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIA 302
+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFWIA
Sbjct: 242 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 301
Query: 303 HPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTG 362
PGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + TTG
Sbjct: 302 QPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTG 361
Query: 363 EGLDWGVLFGFGPGLTVETVVLHSVPI 389
EGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 362 EGLEWGVLFGFGPGLTIETVVLRSVAI 388
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa)
Length = 387
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/387 (77%), Positives = 333/387 (86%)
Query: 3 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDK 62
+V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMCDK
Sbjct: 1 SVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDK 60
Query: 63 SMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKS 122
SMIK+RYMYLTEEILKENPN+C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKS
Sbjct: 61 SMIKRRYMYLTEEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKS 120
Query: 123 KITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 182
KITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQG FAGGTVLRLAKDLAENNK
Sbjct: 121 KITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNK 180
Query: 183 GARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVST 242
GARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V T
Sbjct: 181 GARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWT 240
Query: 243 SQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIA 302
+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+GISD+NSIFWIA
Sbjct: 241 AQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIA 300
Query: 303 HPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTG 362
HPGGPAILDQV ATR+VLSEYG MSSACVLFILDEMRKKS + TTG
Sbjct: 301 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGAMSSACVLFILDEMRKKSTQNGLKTTG 360
Query: 363 EGLDWGVLFGFGPGLTVETVVLHSVPI 389
EGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 361 EGLEWGVLFGFGPGLTIETVVLRSVAI 387
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein
Length = 979
Score = 605 bits (1559), Expect = e-173, Method: Compositional matrix adjust.
Identities = 282/389 (72%), Positives = 327/389 (84%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
MA+V+E RNAQRA GPAT+LAIGTATP H V Q+DY DYYF++TKSEHMT LK+KF R+C
Sbjct: 588 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRIC 647
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIKKRY++LTEE+L+E+PN+ AYMAPSL+ RQ+I+ EVPKLGKEAA KA+KEWGQP
Sbjct: 648 DKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQP 707
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHL+FCTTSGV+MPGADY+L L+GL PSV+R M+Y QGC+AGGTVLR AKDLAEN
Sbjct: 708 KSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN 767
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
N GARVLVVCSEIT VTFRGP++ LDSLVGQALF PD S+ERPL+QLV
Sbjct: 768 NAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLV 827
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
S +QT +P+S GAI G+LREVGLTFHL +VP LIS+N+EK L++AF P+GISDWNS+FW
Sbjct: 828 SAAQTFIPNSAGAIAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFW 887
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILD V ATR VLSEYGNMSSACVLFILDEMRKKS + +AT
Sbjct: 888 IAHPGGPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGERAT 947
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGLDWGVLFGFGPGLT+ETVVLHS+P+
Sbjct: 948 TGEGLDWGVLFGFGPGLTIETVVLHSIPM 976
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0V|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0W|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
Length = 393
Score = 605 bits (1559), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/389 (73%), Positives = 325/389 (83%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMC
Sbjct: 5 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMC 64
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
DKSMIK+RYMYLTEEILKENPN+C YMAPSLDARQ ++ +EVP+LGKEAA KAIKEWGQP
Sbjct: 65 DKSMIKRRYMYLTEEILKENPNVCEYMAPSLDARQAMLAMEVPRLGKEAAVKAIKEWGQP 124
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KSKITHLI C+T+ D+PGADYQLTKL+GLRP VKR ++Q GCFAGGTVLRLAKDLAEN
Sbjct: 125 KSKITHLIVCSTTTPDLPGADYQLTKLLGLRPYVKRVGVFQHGCFAGGTVLRLAKDLAEN 184
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQALF P +E+P++++V
Sbjct: 185 NKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMV 244
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
T+QTI PDS+GAIDGHLRE GLTFHL VP ++SKNI K+L EAF P+GISD+NSIFW
Sbjct: 245 WTAQTIAPDSEGAIDGHLREAGLTFHLKGAVPDIVSKNITKALVEAFEPLGISDYNSIFW 304
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGGPAILDQV ATR+VLSEYGNMSSACVLFILDEMRKKS + T
Sbjct: 305 IAHPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKT 364
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct: 365 TGEGLEWGVLFGFGPGLTIETVVLRSVAI 393
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea
pdb|1Z1F|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea (Resveratrol-Bound Form)
Length = 390
Score = 563 bits (1451), Expect = e-161, Method: Compositional matrix adjust.
Identities = 268/389 (68%), Positives = 313/389 (80%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M +V IR QRA+GPATVLAIGTA P + V+Q+ Y DYYFR+T SEHMT+LK+KF+R+C
Sbjct: 2 MVSVSGIRKVQRAEGPATVLAIGTANPPNCVDQSTYADYYFRVTNSEHMTDLKKKFQRIC 61
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
+++ IK R+MYLTEEILKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP
Sbjct: 62 ERTQIKNRHMYLTEEILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQP 121
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
SKITHLIFCTTSGV +PG DY+L L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAEN
Sbjct: 122 MSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAEN 181
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
NK ARVL+VCSE T+VTFRGP++T +DSLVGQALF P VE PL+++V
Sbjct: 182 NKDARVLIVCSENTSVTFRGPSETDMDSLVGQALFADGAAAIIIGSDPVPEVENPLFEIV 241
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
ST Q ++P+S GAI G LREVGLTF+L K VP +IS+NI +LS+AF P+GISD+NSIFW
Sbjct: 242 STDQQLVPNSHGAIGGLLREVGLTFYLNKSVPDIISQNINDALSKAFDPLGISDYNSIFW 301
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
IAHPGG AILDQV ATR VLS YGNMSSACV FI+D MRKKS E T
Sbjct: 302 IAHPGGRAILDQVEEKVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMRKKSLEAGLKT 361
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TGEGLDWGVLFGFGPGLT+ETVVL S+ I
Sbjct: 362 TGEGLDWGVLFGFGPGLTIETVVLRSMAI 390
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1QLV|B Chain B, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1EE0|A Chain A, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
pdb|1EE0|B Chain B, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
Length = 402
Score = 550 bits (1416), Expect = e-157, Method: Compositional matrix adjust.
Identities = 260/388 (67%), Positives = 309/388 (79%)
Query: 4 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKS 63
V+ IR A RA G AT+LAIGTATP + V QADY DYYFR+TKSEHM +LKEKFKR+C+K+
Sbjct: 9 VEVIREAGRAQGLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKT 68
Query: 64 MIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSK 123
IKKRY+ LTE+ L+ENP MC +MAPSL+ARQD+VV VP LGKEAA KAI EWG PKSK
Sbjct: 69 AIKKRYLALTEDYLQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSK 128
Query: 124 ITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKG 183
ITHLIFCTT+GVDMPGADYQL KL+GL PSVKR+M+YQQG AGGTVLRLAKDLAENNKG
Sbjct: 129 ITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGXAAGGTVLRLAKDLAENNKG 188
Query: 184 ARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTS 243
+RVL+VCSEITA+ F GP + HLDSLV QALF P +VERP++++VST
Sbjct: 189 SRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVERPIFEIVSTD 248
Query: 244 QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAH 303
QTILPD++ A+ HLRE GLTF L +DVP +++KNIE + +A +P+GI+DWNS+FW+ H
Sbjct: 249 QTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVH 308
Query: 304 PGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGE 363
PGG AILDQV A+R VLSEYGN+ SACVLFI+DE+RK+S E K+TTGE
Sbjct: 309 PGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGE 368
Query: 364 GLDWGVLFGFGPGLTVETVVLHSVPIKA 391
GLD GVLFGFGPG+TVETVVL SV + A
Sbjct: 369 GLDCGVLFGFGPGMTVETVVLRSVRVTA 396
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F)
pdb|3A5S|B Chain B, Benzalacetone Synthase (I207lL208F)
Length = 387
Score = 535 bits (1378), Expect = e-152, Method: Compositional matrix adjust.
Identities = 250/373 (67%), Positives = 297/373 (79%)
Query: 17 ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEI 76
ATV+AIGTA P + QAD+PD+YFR+T S+H+ LK+KFKR+C+ S I+KRY+++TEEI
Sbjct: 13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 77 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVD 136
LKENPN+ AY A SL+ R + V V +LGKEAA KAIKEWGQPKSKITHLI C +GVD
Sbjct: 73 LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 137 MPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAV 196
MPGADYQLTKL+ L PSVKRFM Y GC+AGGTVLRLAKD+AENNKGARVL+VCSE+T
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 197 TFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDG 256
FRGP++THLDS++GQALF PD +VERP+++LVST+QTI+P+S GAI+G
Sbjct: 193 CFRGPSETHLDSMIGQALFGDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIEG 252
Query: 257 HLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXX 316
HL E GL+FHL K VP LIS NI+ LS+AF P+ ISDWNS+FWIAHPGGPAILDQV
Sbjct: 253 HLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTAK 312
Query: 317 XXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPG 376
TRQVL +YGNMSSA V FI+DEMRKKS E +ATTGEGL+WGVLFGFGPG
Sbjct: 313 VGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGPG 372
Query: 377 LTVETVVLHSVPI 389
+TVETVVL SVP+
Sbjct: 373 ITVETVVLRSVPV 385
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5Q|B Chain B, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5R|A Chain A, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
pdb|3A5R|B Chain B, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
Length = 387
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/373 (66%), Positives = 296/373 (79%)
Query: 17 ATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEI 76
ATV+AIGTA P + QAD+PD+YFR+T S+H+ LK+KFKR+C+ S I+KRY+++TEEI
Sbjct: 13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 77 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVD 136
LKENPN+ AY A SL+ R + V V +LGKEAA KAIKEWGQPKSKITHLI C +GVD
Sbjct: 73 LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 137 MPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAV 196
MPGADYQLTKL+ L PSVKRFM Y GC+AGGTVLRLAKD+AENNKGARVL+VCSE+T
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 197 TFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDG 256
FRGP++THLDS++GQA+ PD +VERP+++LVST+QTI+P+S GAI+G
Sbjct: 193 CFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVERPIFELVSTAQTIVPESHGAIEG 252
Query: 257 HLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXX 316
HL E GL+FHL K VP LIS NI+ LS+AF P+ ISDWNS+FWIAHPGGPAILDQV
Sbjct: 253 HLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTAK 312
Query: 317 XXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPG 376
TRQVL +YGNMSSA V FI+DEMRKKS E +ATTGEGL+WGVLFGFGPG
Sbjct: 313 VGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGPG 372
Query: 377 LTVETVVLHSVPI 389
+TVETVVL SVP+
Sbjct: 373 ITVETVVLRSVPV 385
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|E Chain E, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|F Chain F, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
Length = 397
Score = 509 bits (1312), Expect = e-145, Method: Compositional matrix adjust.
Identities = 242/385 (62%), Positives = 301/385 (78%), Gaps = 1/385 (0%)
Query: 7 IRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIK 66
R QRADG A++LAIGTA P ++V+Q+ YPD+YFRIT +EH TELK+KFKR+C++S IK
Sbjct: 13 FRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIK 72
Query: 67 KRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKIT 125
+RYMYLTEEILK+NP++CA++ PSLDARQ ++ +EVP+L KEAA KAI+EWGQ KS IT
Sbjct: 73 QRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT 132
Query: 126 HLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGAR 185
HLIFC+T+ D+PGAD+++ KL+GL PSVKR ++Q GCFAGGTVLR+AKDLAENN+GAR
Sbjct: 133 HLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGAR 192
Query: 186 VLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQT 245
VLV+CSE TAVTFRGP++THLDSLVGQALF P VE+ +++V T+QT
Sbjct: 193 VLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQT 252
Query: 246 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPG 305
++P+S+GAI G +REVGLTF L VP LIS NIE + EAF+ ISDWN +FW+ HPG
Sbjct: 253 VVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPG 312
Query: 306 GPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGL 365
G AILD+V TR V+SEYGNMSSACV FILD+ RK S + +TTGEGL
Sbjct: 313 GRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGL 372
Query: 366 DWGVLFGFGPGLTVETVVLHSVPIK 390
+ GVLFGFGPGLT+ETVVL SVPI+
Sbjct: 373 EMGVLFGFGPGLTIETVVLKSVPIQ 397
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XET|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
Length = 413
Score = 509 bits (1311), Expect = e-145, Method: Compositional matrix adjust.
Identities = 242/385 (62%), Positives = 301/385 (78%), Gaps = 1/385 (0%)
Query: 7 IRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIK 66
R QRADG A++LAIGTA P ++V+Q+ YPD+YFRIT +EH TELK+KFKR+C++S IK
Sbjct: 29 FRKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIK 88
Query: 67 KRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKIT 125
+RYMYLTEEILK+NP++CA++ PSLDARQ ++ +EVP+L KEAA KAI+EWGQ KS IT
Sbjct: 89 QRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT 148
Query: 126 HLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGAR 185
HLIFC+T+ D+PGAD+++ KL+GL PSVKR ++Q GCFAGGTVLR+AKDLAENN+GAR
Sbjct: 149 HLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGAR 208
Query: 186 VLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQT 245
VLV+CSE TAVTFRGP++THLDSLVGQALF P VE+ +++V T+QT
Sbjct: 209 VLVICSETTAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACFEIVWTAQT 268
Query: 246 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPG 305
++P+S+GAI G +REVGLTF L VP LIS NIE + EAF+ ISDWN +FW+ HPG
Sbjct: 269 VVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPG 328
Query: 306 GPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGL 365
G AILD+V TR V+SEYGNMSSACV FILD+ RK S + +TTGEGL
Sbjct: 329 GRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGL 388
Query: 366 DWGVLFGFGPGLTVETVVLHSVPIK 390
+ GVLFGFGPGLT+ETVVL SVPI+
Sbjct: 389 EMGVLFGFGPGLTIETVVLKSVPIQ 413
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWJ|B Chain B, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWK|A Chain A, Crystal Structure Of The Polyketide Synthase 1 From
Huperzia Serrata
Length = 402
Score = 491 bits (1264), Expect = e-139, Method: Compositional matrix adjust.
Identities = 231/378 (61%), Positives = 284/378 (75%)
Query: 12 RADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMY 71
+ DGPAT+LAIGT+ P + Q+ YPD++F +T TELK+KF+R+CDKS IKKR+ +
Sbjct: 25 KPDGPATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFH 84
Query: 72 LTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCT 131
LT+EIL++NP++C + SLD RQDI V+EVPKL KEAA AIK+WGQPKSKITHL+F T
Sbjct: 85 LTDEILRKNPSICKFKEASLDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFAT 144
Query: 132 TSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCS 191
TSGVDMPGAD+QL KL+GLRP+VKR M+YQQG +AG TVLR+AKDLAENNKGARVLV CS
Sbjct: 145 TSGVDMPGADFQLAKLLGLRPTVKRVMLYQQGXYAGATVLRVAKDLAENNKGARVLVACS 204
Query: 192 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSD 251
E+TAVTFR P++THLD LVG ALF P E+PL+++ + +LPDSD
Sbjct: 205 EVTAVTFRAPSETHLDGLVGSALFGDGAAALIVGSDPVPQEEKPLFEIHWAGEAVLPDSD 264
Query: 252 GAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILD 311
GAI+GHLRE GL FHLLKDVPGLISKNI+K L+E V +N +FW HPGGPAILD
Sbjct: 265 GAINGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDMFWAVHPGGPAILD 324
Query: 312 QVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLF 371
Q+ A+R VL+ YGNMSSA VLF+LD++RK S E TTGEG +WG +
Sbjct: 325 QIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEELHLPTTGEGFEWGFVI 384
Query: 372 GFGPGLTVETVVLHSVPI 389
GFGPGLTVET++L S+ I
Sbjct: 385 GFGPGLTVETLLLRSINI 402
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
pdb|2P0U|B Chain B, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
Length = 413
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 222/379 (58%), Positives = 277/379 (73%)
Query: 12 RADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMY 71
+A GPATVLA+G A PA+ QA YPD++F IT S LK KF+R+CDKS IKKR+ Y
Sbjct: 30 QAVGPATVLAMGKAVPANVFEQATYPDFFFNITNSNDKPALKAKFQRICDKSGIKKRHFY 89
Query: 72 LTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCT 131
L ++IL+ NP MC YM SL+ RQ+I V +VPKL KEA+ AIKEWG+PKS+ITH++ T
Sbjct: 90 LDQKILESNPAMCTYMETSLNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMAT 149
Query: 132 TSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCS 191
TSGV+MPGA+ KL+GLRP+V+R MMYQQG FAG TVLR+AKDLAENN GARVL +CS
Sbjct: 150 TSGVNMPGAELATAKLLGLRPNVRRVMMYQQGXFAGATVLRVAKDLAENNAGARVLAICS 209
Query: 192 EITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSD 251
E+TAVTFR P++TH+D LVG ALF P +ERP+Y++ + +LP+SD
Sbjct: 210 EVTAVTFRAPSETHIDGLVGSALFGDGAAAVIVGSDPRPGIERPIYEMHWAGEMVLPESD 269
Query: 252 GAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILD 311
GAIDGHL E GL FHLLKDVPGLI+KNI L + VG S WN +FW HPGGPAILD
Sbjct: 270 GAIDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNELFWAVHPGGPAILD 329
Query: 312 QVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLF 371
QV A+R +LS+YGNMSSA VLF+LD +R++S E K+T GEG +WG L
Sbjct: 330 QVEAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLESNKSTFGEGSEWGFLI 389
Query: 372 GFGPGLTVETVVLHSVPIK 390
GFGPGLTVET++L ++P++
Sbjct: 390 GFGPGLTVETLLLRALPLQ 408
>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|B Chain B, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|C Chain C, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|D Chain D, Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 206/389 (52%), Positives = 278/389 (71%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
MA + +R QRA GPAT++AIGTATP + Q+ +PD+YFR+T S+ ELK+KF+RMC
Sbjct: 1 MANLHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
+K+M+KKRY++LTEEILKE P +C+Y S D RQDIVV E+P+L KEAA KAIKEWG+P
Sbjct: 61 EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KS+ITHL+FC+ SG+DMPGADY+L L+GL +V R M+Y Q C G +LR+AKDLAEN
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
N+GARVLVV EIT ++FRGP + ++L GQA F P +E+P+Y++
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADPLEGIEKPIYEIA 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
+ Q + +S GA+ GHLR G TF+ L +P +I+ N+ +SL A AP+G+ +WN +FW
Sbjct: 241 AAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
+AHPG AI+D + R V +EYGNM SA V F++DE+RK+SA E ++T
Sbjct: 301 VAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRST 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TG+GL WGVL GFGPGL++ETVVL S+P+
Sbjct: 361 TGDGLQWGVLLGFGPGLSIETVVLRSMPL 389
>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|B Chain B, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|C Chain C, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|D Chain D, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 460 bits (1184), Expect = e-130, Method: Compositional matrix adjust.
Identities = 205/389 (52%), Positives = 277/389 (71%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
MA + +R QRA GPAT++AIGTATP + Q+ +PD+YFR+T S+ ELK+KF+RMC
Sbjct: 1 MANLHALRREQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMC 60
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
+K+M+KKRY++LTEEILKE P +C+Y S D RQDIVV E+P+L KEAA KAIKEWG+P
Sbjct: 61 EKTMVKKRYLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRP 120
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KS+ITHL+FC+ SG+DMPGADY+L L+GL +V R M+Y Q C G +LR+AKDLAEN
Sbjct: 121 KSEITHLVFCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAEN 180
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
N+GARVLVV EIT ++FRGP + ++L QA F P +E+P+Y++
Sbjct: 181 NRGARVLVVACEITVLSFRGPNEGDFEALAFQAGFGDGAGAVVVGADPLEGIEKPIYEIA 240
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFW 300
+ Q + +S GA+ GHLR G TF+ L +P +I+ N+ +SL A AP+G+ +WN +FW
Sbjct: 241 AAMQETVAESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFW 300
Query: 301 IAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKAT 360
+AHPG AI+D + R V +EYGNM SA V F++DE+RK+SA E ++T
Sbjct: 301 VAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRST 360
Query: 361 TGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
TG+GL WGVL GFGPGL++ETVVL S+P+
Sbjct: 361 TGDGLQWGVLLGFGPGLSIETVVLRSMPL 389
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A
pdb|2D3M|B Chain B, Pentaketide Chromone Synthase Complexed With Coenzyme A
Length = 406
Score = 444 bits (1143), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/392 (55%), Positives = 272/392 (69%), Gaps = 3/392 (0%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M VQ IR AQ+ADG ATV+AIGTA P H Q Y D YFR T SEH ELK+KF +C
Sbjct: 14 MEDVQGIRKAQKADGTATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHIC 73
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
K+MI KRY EE LK+ PN+ +Y PSL+ RQDI V VP LG EAA KAI+EWG+P
Sbjct: 74 KKTMIGKRYFNYDEEFLKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRP 133
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KS+ITHL+FCT+ GVDMP AD+Q KL+GL +V ++ +Y QG +AGGTV+R AKDLAEN
Sbjct: 134 KSEITHLVFCTSCGVDMPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAEN 193
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
N+GARVLVVC+E+T + R P +THLD+ +G +LF P VE+P++++V
Sbjct: 194 NRGARVLVVCAELTIMMLRAPNETHLDNAIGISLFGDGAAALIIGSDPIIGVEKPMFEIV 253
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGIS---DWNS 297
T QT++P+++ I HLRE G+ F+L K P IS N+E L + F VGI+ DWNS
Sbjct: 254 CTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNS 313
Query: 298 IFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEA 357
+FWI HPGG AILDQV A R VL +YGNM SA V +ILDEMR+KSA +
Sbjct: 314 LFWIPHPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKG 373
Query: 358 KATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
T GEGL+WGVL GFGPG+TVET++LHS+P+
Sbjct: 374 LETYGEGLEWGVLLGFGPGITVETILLHSLPL 405
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D51|B Chain B, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D52|A Chain A, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
pdb|2D52|B Chain B, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
Length = 406
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/392 (55%), Positives = 272/392 (69%), Gaps = 3/392 (0%)
Query: 1 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
M VQ IR AQ+ADG ATV+AIGTA P H Q Y D YFR T SEH ELK+KF +C
Sbjct: 14 MEDVQGIRKAQKADGTATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHIC 73
Query: 61 DKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQP 120
K+MI KRY EE LK+ PN+ +Y PSL+ RQDI V VP LG EAA KAI+EWG+P
Sbjct: 74 KKTMIGKRYFNYDEEFLKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRP 133
Query: 121 KSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAEN 180
KS+ITHL+FCT+ GVDMP AD+Q KL+GL +V ++ +Y QG +AGGTV+R AKDLAEN
Sbjct: 134 KSEITHLVFCTSCGVDMPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAEN 193
Query: 181 NKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLV 240
N+GARVLVVC+E+T + R P +THLD+ +G +LF P VE+P++++V
Sbjct: 194 NRGARVLVVCAELTIMGLRAPNETHLDNAIGISLFGDGAAALIIGSDPIIGVEKPMFEIV 253
Query: 241 STSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGIS---DWNS 297
T QT++P+++ I HLRE G+ F+L K P IS N+E L + F VGI+ DWNS
Sbjct: 254 CTKQTVIPNTEDVIHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNS 313
Query: 298 IFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEA 357
+FWI HPGG AILDQV A R VL +YGNM SA V +ILDEMR+KSA +
Sbjct: 314 LFWIPHPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKG 373
Query: 358 KATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 389
T GEGL+WGVL GFGPG+TVET++LHS+P+
Sbjct: 374 LETYGEGLEWGVLLGFGPGITVETILLHSLPL 405
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|B Chain B, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|C Chain C, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|D Chain D, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
Length = 416
Score = 350 bits (898), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 185/385 (48%), Positives = 250/385 (64%), Gaps = 7/385 (1%)
Query: 6 EIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMI 65
E+R +QRADG A VLAIGTA P + V Q + PD+YFR+T S+H+T LK+KFKR+C + +
Sbjct: 30 EMRRSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGV 89
Query: 66 KKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKIT 125
++RY++ TEE+L +P APSLDAR DI VP+L EAA KAI EWG+P + IT
Sbjct: 90 QRRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT 149
Query: 126 HLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGAR 185
HL+ T SG +PG D++L L+GLRPSV+R M++ GCFAG LRLAKDLAEN++GAR
Sbjct: 150 HLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGAR 209
Query: 186 VLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQT 245
VLVV +E+T + F GP + +L+ Q LF D VERPL+++VS +QT
Sbjct: 210 VLVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADAD-DVERPLFEIVSAAQT 268
Query: 246 ILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAF----APVGISDWNSIFWI 301
I+P+SD A++ E L L + VPGLI N+E+ L + F G WN +FW
Sbjct: 269 IIPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWA 328
Query: 302 AHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATT 361
HPG I+DQV A+R+VLS+YGNMS A V+F LDE+R++ E A A
Sbjct: 329 VHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAAAA-- 386
Query: 362 GEGLDWGVLFGFGPGLTVETVVLHS 386
GE + GV+ FGPG+TV+ ++LH+
Sbjct: 387 GEWPELGVMMAFGPGMTVDAMLLHA 411
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
pdb|3OIT|B Chain B, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
Length = 387
Score = 348 bits (893), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 184/384 (47%), Positives = 249/384 (64%), Gaps = 7/384 (1%)
Query: 7 IRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIK 66
+R +QRADG A VLAIGTA P + V Q + PD+YFR+T S+H+T LK+KFKR+C + ++
Sbjct: 1 MRRSQRADGLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQ 60
Query: 67 KRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITH 126
+RY++ TEE+L +P APSLDAR DI VP+L EAA KAI EWG+P + ITH
Sbjct: 61 RRYLHHTEEMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITH 120
Query: 127 LIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARV 186
L+ T SG +PG D++L L+GLRPSV+R M++ GCFAG LRLAKDLAEN++GARV
Sbjct: 121 LVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARV 180
Query: 187 LVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTI 246
LVV +E+T + F GP + +L+ Q LF D VERPL+++VS +QTI
Sbjct: 181 LVVAAELTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADAD-DVERPLFEIVSAAQTI 239
Query: 247 LPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAF----APVGISDWNSIFWIA 302
+P+SD A++ E L L + VPGLI N+E+ L + F G WN +FW
Sbjct: 240 IPESDHALNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAV 299
Query: 303 HPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTG 362
HPG I+DQV A+R+VLS+YGNMS A V+F LDE+R++ E A A G
Sbjct: 300 HPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAAAA--G 357
Query: 363 EGLDWGVLFGFGPGLTVETVVLHS 386
E + GV+ FGPG+TV+ ++LH+
Sbjct: 358 EWPELGVMMAFGPGMTVDAMLLHA 381
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
pdb|2H84|B Chain B, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
Length = 374
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 174/385 (45%), Gaps = 21/385 (5%)
Query: 8 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKK 67
R + +++ + VL IG + P ++Q D + E EK KR+ ++S IK
Sbjct: 5 RLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKT 62
Query: 68 RYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHL 127
R++ + + EN ++ D V VP L ++A +A+K+WG K ITH+
Sbjct: 63 RHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHI 120
Query: 128 IFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVL 187
+ T++G+ +P +++L L+GL V+R + GC AG + LR A LA+ + R+L
Sbjct: 121 VSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRIL 180
Query: 188 VVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTIL 247
VVC+E+ ++ F D +V ++F P E PLY+++ +
Sbjct: 181 VVCTEVCSLHFSNTDGG--DQMVASSIFADGSAAYIIGCNPRIE-ETPLYEVMCSINRSF 237
Query: 248 PDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIF-----WIA 302
P+++ A+ L + G L +P +I IE + + +I ++
Sbjct: 238 PNTENAMVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLI 297
Query: 303 HPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTG 362
H GG +IL + T V YGNMSSA V+F++D RK +
Sbjct: 298 HTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHARKSKSLPT----- 352
Query: 363 EGLDWGVLFGFGPGLTVETVVLHSV 387
+ + FGPGL E L +V
Sbjct: 353 ----YSISLAFGPGLAFEGCFLKNV 373
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|C Chain C, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|D Chain D, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
Length = 393
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 169/387 (43%), Gaps = 30/387 (7%)
Query: 5 QEIRNAQRADGPATVLAI----GTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
E+ AQ P T +A+ T TP VNQ+D D R+ + +E+ R+
Sbjct: 17 HEVGLAQLPPAPPTTVAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVY 73
Query: 61 DKSMIKKRYMYLTE-----EILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIK 115
KS I R M + ++ + P ++ R + L + + +A+
Sbjct: 74 QKSRITTRRMAVDPLDAKFDVFRREP-------ATIRDRMHLFYEHAVPLAVDVSKRALA 126
Query: 116 EWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAK 175
++I L+ T++G PG D + K +GL PS+ R ++ GC A L A
Sbjct: 127 GLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTAT 186
Query: 176 DLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXXXXXXXXPDTSVERP 235
+ + + LVVC E+ +V D ++ +V +LF P
Sbjct: 187 NYVRAHPAMKALVVCIELCSVNAVFADD--INDVVIHSLFGDGCAALVIGASQVQEKLEP 244
Query: 236 LYQLVSTSQTILPDS--DGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGIS 293
+V +S + L D+ DG + G + G+T L +++PG I + ++E G+
Sbjct: 245 GKVVVRSSFSQLLDNTEDGIVLG-VNHNGITCELSENLPGYIFSGVAPVVTEMLWDNGLQ 303
Query: 294 DWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKS 353
+ W HPGGP I++Q + VL+ +GNM S ++F+L+ M ++
Sbjct: 304 ISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMVQQ- 362
Query: 354 AEEAKATTGEGLDWGVLFGFGPGLTVE 380
AE AKA + GV F FGPG+TVE
Sbjct: 363 AESAKA-----ISTGVAFAFGPGVTVE 384
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|B Chain B, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|C Chain C, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|D Chain D, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
Length = 393
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 165/390 (42%), Gaps = 36/390 (9%)
Query: 5 QEIRNAQRADGPATVLAI----GTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60
E+ AQ P T +A+ T TP VNQ+D D R+ + +E+ R+
Sbjct: 17 HEVGLAQLPPAPPTTVAVIEGLATGTPRRVVNQSDAAD---RVAELFLDPGQRERIPRVY 73
Query: 61 DKSMIKKRYMYLTE-----EILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIK 115
KS I R M + ++ + P ++ R + L + + +A+
Sbjct: 74 QKSRITTRRMAVDPLDAKFDVFRREP-------ATIRDRMHLFYEHAVPLAVDVSKRALA 126
Query: 116 EWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAK 175
++I L+ T++G PG D + K +GL PS+ R ++ GC A L A
Sbjct: 127 GLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTAT 186
Query: 176 DLAENNKGARVLVVCSE---ITAVTFRGPADTHLDSLVGQ--ALFXXXXXXXXXXXXPDT 230
+ + + LVVC E + AV D + SL G A P
Sbjct: 187 NYVRAHPAMKALVVCIELFSVNAVFADDINDVVIHSLFGDGCAALVIGASQVQEKLEPGK 246
Query: 231 SVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPV 290
V R S SQ + DG + G + G+T L +++PG I + ++E
Sbjct: 247 VVVRS-----SFSQLLDNTEDGIVLG-VNHNGITCELSENLPGYIFSGVAPVVTEMLWDN 300
Query: 291 GISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMR 350
G+ + W HPGGP I++Q + VL+ +GNM S ++F+L+ M
Sbjct: 301 GLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLETMV 360
Query: 351 KKSAEEAKATTGEGLDWGVLFGFGPGLTVE 380
++ AE AKA + GV F FGPG+TVE
Sbjct: 361 QQ-AESAKA-----ISTGVAFAFGPGVTVE 384
>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|B Chain B, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|C Chain C, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|D Chain D, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
Length = 379
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 17/311 (5%)
Query: 89 PSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLI 148
P++ ++ + + L EA+ KA+ E ++ITH++ T + PG D+ + K +
Sbjct: 68 PTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKEL 127
Query: 149 GLRPSVKRFMMYQQGCFAGGTVLRLAKDLA----ENNKGARVLVVCSEITAVTFRGPADT 204
GL +++ +++ G G LR A +L K AR+LV+ E++ R ++
Sbjct: 128 GLSDRLEKVLLHGIGXSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRSELES 187
Query: 205 HLDSL----VGQALFXXXXXXXXXXXXPDTSVERP-LYQLVSTSQTILPDSDGAIDGHLR 259
+D+L +G ALF + +P +Y L+ ++PDS+ + G +
Sbjct: 188 -IDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSEHDLGGDVD 246
Query: 260 EVGLTFHLLKDVPGLISKNIEKSLSEAFA------PVGISDWNSIFWIAHPGGPAILDQV 313
+G L VP L +++ + ++ + P W HPGG IL
Sbjct: 247 PMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPGGATILSGA 306
Query: 314 XXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGF 373
A+ +GN SSA + +L+ +R+K +A A G+ ++ V F
Sbjct: 307 ESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDM-DALAPGGKVKEYVVGCAF 365
Query: 374 GPGLTVETVVL 384
GPG+ VE +L
Sbjct: 366 GPGINVEMCML 376
>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
pdb|3E1H|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
Length = 465
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 138/311 (44%), Gaps = 17/311 (5%)
Query: 89 PSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLI 148
P++ ++ + + L EA+ KA+ E ++ITH++ T + PG D+ + K +
Sbjct: 97 PTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKEL 156
Query: 149 GLRPSVKRFMMYQQGCFAGGTVLRLAKDLA----ENNKGARVLVVCSEITAVTFRGPADT 204
GL +++ +++ GC G LR A +L K AR+LV+ E++ R ++
Sbjct: 157 GLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRSELES 216
Query: 205 HLDSL----VGQALFXXXXXXXXXXXXPDTSVERP-LYQLVSTSQTILPDSDGAIDGHLR 259
+D+L +G ALF + +P +Y L+ ++PDS+ + +
Sbjct: 217 -IDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSEHDLGFDVD 275
Query: 260 EVGLTFHLLKDVPGLISKNIEKSLSEAFA------PVGISDWNSIFWIAHPGGPAILDQV 313
+G L VP L +++ + ++ + P W HPGG IL
Sbjct: 276 PMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPGGATILSGA 335
Query: 314 XXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGF 373
A+ +GN SSA + +L+ +R+K +A A G+ ++ V F
Sbjct: 336 ESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDM-DALAPGGKVKEYVVGCAF 394
Query: 374 GPGLTVETVVL 384
GPG+ VE +L
Sbjct: 395 GPGINVEMCML 405
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
pdb|1U0M|B Chain B, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
Length = 382
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 119/292 (40%), Gaps = 14/292 (4%)
Query: 89 PSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLI 148
P + R + E +A+ + + I +I+ + +G MP L +
Sbjct: 71 PGFEDRNKVYEREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEM 130
Query: 149 GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDS 208
G + ++ + Q GC AGG + A D A L+V E ++ ++ P D + S
Sbjct: 131 GFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCSLCYQ-PTDLGVGS 189
Query: 209 LVGQALFXXXXXXXXXXXXPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLL 268
L+ LF T V +L ++P ++ I ++ G F L
Sbjct: 190 LLCNGLFGDGIAAAVVRGRGGTGV-----RLERNGSYLIPKTEDWIMYDVKATGFHFLLD 244
Query: 269 KDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATR 328
K VP + + + +L E G + F+I H GGP ILD + +R
Sbjct: 245 KRVPATM-EPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSR 303
Query: 329 QVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVE 380
L+EYGN++SA VL L + + E A G+L GFGPG+T E
Sbjct: 304 ATLTEYGNIASAVVLDALRRLFDEGGVEEGAR-------GLLAGFGPGITAE 348
>pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUO|B Chain B, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUT|A Chain A, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|B Chain B, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|C Chain C, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|D Chain D, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
Length = 379
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 137/311 (44%), Gaps = 17/311 (5%)
Query: 89 PSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLI 148
P++ ++ + + L EA+ KA+ E ++ITH++ T + PG D+ + K +
Sbjct: 68 PTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKEL 127
Query: 149 GLRPSVKRFMMYQQGCFAGGTVLRLAKDLA----ENNKGARVLVVCSEITAVTFRGPADT 204
GL +++ +++ G G LR A +L K AR+LV+ E++ R ++
Sbjct: 128 GLSDRLEKVLLHGIGXSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRSELES 187
Query: 205 HLDSL----VGQALFXXXXXXXXXXXXPDTSVERP-LYQLVSTSQTILPDSDGAIDGHLR 259
+D+L +G ALF + +P +Y L+ ++PDS+ + +
Sbjct: 188 -IDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDSEHDLGFDVD 246
Query: 260 EVGLTFHLLKDVPGLISKNIEKSLSEAFA------PVGISDWNSIFWIAHPGGPAILDQV 313
+G L VP L +++ + ++ + P W HPGG IL
Sbjct: 247 PMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHPGGATILSGA 306
Query: 314 XXXXXXXXXXXXATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGF 373
A+ +GN SSA + +L+ +R+K +A A G+ ++ V F
Sbjct: 307 ESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDM-DALAPGGKVKEYVVGCAF 365
Query: 374 GPGLTVETVVL 384
GPG+ VE +L
Sbjct: 366 GPGINVEMCML 376
>pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A
Type Iii Polyketide Synthase
Length = 413
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 115/287 (40%), Gaps = 29/287 (10%)
Query: 102 VPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQ 161
V G+ AA A++ G + + LI ++ +PG D L + LR Q
Sbjct: 137 VQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPATQ 196
Query: 162 QGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFXXXXXX 221
C AG L LA DL + VLVV SE + T++ PAD L+SL+ + LF
Sbjct: 197 WACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQ-PADDTLESLIVRLLFADTAVA 255
Query: 222 XXXXXXPDTSVERP--LYQLVSTSQTILPDSDGAIDGHLREVGLT-FHLLKDVPGLISKN 278
P RP + +L + LP G D H E H + D G +
Sbjct: 256 AVVTGRP-----RPESVLRLDAAWHHTLP---GTRDLHRLETRADGTHFVMDRRG--PRA 305
Query: 279 IEKSLSEAFAPVGI------SDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXXATRQVLS 332
++++++ + + + S W+ +AHPGG +L+ + + S
Sbjct: 306 VQETVTAMWEWLRVRYEDDPSSWHPDVLLAHPGGTRVLEYMEQTMPDEWPSGLLSYSRDS 365
Query: 333 -EYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLT 378
GN A V IL + A +A TG VL+ PGLT
Sbjct: 366 YTSGNRGGAAVFDIL-----RRAHDAGQKTGSR---AVLYAAAPGLT 404
>pdb|3SQZ|A Chain A, Crystal Structure Of Hmg_coa Synthase Complexed With Coa
Length = 389
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 118 GQPKSKITHLIFCTTSGVDMP--GADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAK 175
+ K KI +I T S VD GA Y + L+G++P + F M + C++ L AK
Sbjct: 65 AEDKEKIDMVILATESSVDQSKAGAVY-VHSLLGIQPFARSFEMKEAXCYSATAALNYAK 123
Query: 176 DLAENNKGARVLVVCSEITAVTFRGPADT 204
E + RVLV+ S+I P ++
Sbjct: 124 LHVEKHPDTRVLVLASDIAKYGIGTPGES 152
>pdb|3LEH|A Chain A, The Crystal Structure Of Smu.943c From Streptococcus
Mutans Ua159
Length = 425
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 119 QPKSKITHLIFCTTSGVDMP--GADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKD 176
+ K KI +I T S VD GA Y + L+G++P + F M ++ C++ L AK
Sbjct: 100 EDKEKIDMVILATESSVDQSKAGAVY-VHSLLGIQPFARSFEM-KEACYSATAALNYAKL 157
Query: 177 LAENNKGARVLVVCSEITAVTFRGPADT 204
E + RVLV+ S+I P ++
Sbjct: 158 HVEKHPDTRVLVLASDIAKYGIGTPGES 185
>pdb|1XPL|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPL|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-coa
Synthase With Acetoacetyl-coa And Acetylated Cysteine
pdb|1XPM|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
pdb|1XPM|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg-Coa And Acetoacetyl-Coa And Acetylated
Cysteine
Length = 390
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 94 RQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY-QLTKLIGLRP 152
QDIV +G AA I + + K KI +I T S VD A Q+ L+G++P
Sbjct: 47 NQDIV-----SMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQP 99
Query: 153 SVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192
+ F M + C+A ++LAKD +VLV+ ++
Sbjct: 100 FARCFEMKEAXCYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XPK|A Chain A, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
pdb|1XPK|D Chain D, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 94 RQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY-QLTKLIGLRP 152
QDIV +G AA I + + K KI +I T S VD A Q+ L+G++P
Sbjct: 47 NQDIV-----SMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQP 99
Query: 153 SVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192
+ F M + C+A ++LAKD +VLV+ ++
Sbjct: 100 FARCFEMKEAXCYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1XPK|C Chain C, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 94 RQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY-QLTKLIGLRP 152
QDIV +G AA I + + K KI +I T S VD A Q+ L+G++P
Sbjct: 48 NQDIV-----SMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQP 100
Query: 153 SVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192
+ F M ++ C+A ++LAKD +VLV+ ++
Sbjct: 101 FARCFEM-KEACYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|2HDB|A Chain A, Hmg-coa Synthase From Enterococcus Faecalis. Mutation
Alanine 110 To Glycine
pdb|2HDB|B Chain B, Hmg-coa Synthase From Enterococcus Faecalis. Mutation
Alanine 110 To Glycine
Length = 383
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 119 QPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDL 177
+ K I +I T S +D A L +L+G++P + F + ++GC+ L+LAK+
Sbjct: 66 EDKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEI-KEGCYGATAGLQLAKNH 124
Query: 178 AENNKGARVLVVCSEI 193
+ +VLVV ++I
Sbjct: 125 VALHPDKKVLVVAADI 140
>pdb|1X9E|A Chain A, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis
pdb|1X9E|B Chain B, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis
Length = 383
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 119 QPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDL 177
+ K I +I T S +D A L +L+G++P + F + ++ C+ L+LAK+
Sbjct: 66 EDKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEI-KEACYGATAGLQLAKNH 124
Query: 178 AENNKGARVLVVCSEI 193
+ +VLVV ++I
Sbjct: 125 VALHPDKKVLVVAADI 140
>pdb|3V4X|A Chain A, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|B Chain B, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|C Chain C, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
pdb|3V4X|D Chain D, The Biochemical And Structural Basis For Inhibition Of
Enterococcus Faecalis Hmg-Coa Synthase, Mvas, By
Hymeglusin
Length = 388
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 119 QPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDL 177
+ K I +I T S +D A L +L+G++P + F + ++ C+ L+LAK+
Sbjct: 71 EDKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEI-KEACYGATAGLQLAKNH 129
Query: 178 AENNKGARVLVVCSEI 193
+ +VLVV ++I
Sbjct: 130 VALHPDKKVLVVAADI 145
>pdb|1TVZ|A Chain A, Crystal Structure Of 3-hydroxy-3-methylglutaryl-coenzyme A
Synthase From Staphylococcus Aureus
pdb|1TXT|A Chain A, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|B Chain B, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|C Chain C, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
pdb|1TXT|D Chain D, Staphylococcus Aureus 3-hydroxy-3-methylglutaryl-coa
Synthase
Length = 388
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 94 RQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY-QLTKLIGLRP 152
QDIV +G AA I + + K KI +I T S VD A Q+ L+G++P
Sbjct: 48 NQDIV-----SMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQP 100
Query: 153 SVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192
+ F M ++ +A ++LAKD +VLV+ ++
Sbjct: 101 FARCFEM-KEAXYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|3LED|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Iii From Rhodopseudomonas Palustris Cga009
pdb|3LED|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Iii From Rhodopseudomonas Palustris Cga009
Length = 392
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 16 PATVLAIGTATPAHSVNQADYPDYY------------FRITKSEHMTELKEKFKRMCDK- 62
PA + A G TP SV+ A+ + + RI E + L+ +K
Sbjct: 24 PAVIAATGLYTPPDSVSNAELVEAFNTYVANFNAANKARIEAGE-IEPLQPSSSEFIEKA 82
Query: 63 SMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKS 122
S IK RY+ I+ +P++ + P + ++ E AA +AI+ WG+P+
Sbjct: 83 SGIKSRYVVAKPGIV--DPDVXRPIIPERSNDELSILAEX---AVTAAEQAIERWGKPRE 137
Query: 123 KITH-LIFCTTSGVDMPGADYQLTKLIGL 150
+I L C+ P ++ +GL
Sbjct: 138 RIGAVLCACSNXQRAYPAXAIEVQNALGL 166
>pdb|1XPK|B Chain B, Crystal Structure Of Staphylococcus Aureus Hmg-Coa
Synthase With Hmg- Coa And With Acetoacetyl-Coa And
Acetylated Cysteine
Length = 388
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 94 RQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADY-QLTKLIGLRP 152
QDIV +G AA I + + K KI +I T S VD A Q+ L+G++P
Sbjct: 48 NQDIV-----SMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQP 100
Query: 153 SVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE 192
+ F M ++ +A ++LAKD +VLV+ ++
Sbjct: 101 FARCFEM-KEAXYAATPAIQLAKDYLATRPNEKVLVIATD 139
>pdb|1YSL|B Chain B, Crystal Structure Of Hmg-Coa Synthase From Enterococcus
Faecalis With Acetoacetyl-Coa Ligand
Length = 384
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 119 QPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTV-LRLAKD 176
+ K I +I T S +D A L +L+G++P + F + ++ C G T L+LAK+
Sbjct: 66 EDKEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEI-KEACXYGATAGLQLAKN 124
Query: 177 LAENNKGARVLVVCSEI 193
+ +VLVV ++I
Sbjct: 125 HVALHPDKKVLVVAADI 141
>pdb|1MZS|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii With
Bound Dichlorobenzyloxy-Indole-Carboxylic Acid Inhibitor
Length = 317
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 102 VPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLR 151
V +G EAAT+AI+ G K +I ++ TTS P A Q+ ++G++
Sbjct: 51 VSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK 101
>pdb|1HN9|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii
pdb|1HN9|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii
pdb|1HND|A Chain A, Crystal Structure Of Beta-ketoacyl-acp Synthase Iii-coa
Complex
pdb|1HNJ|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii +
Malonyl-Coa
pdb|1HNK|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii, Apo
Tetragonal Form
pdb|2EFT|A Chain A, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A (High
Concentration (1.7mm) Soak)
pdb|2EFT|B Chain B, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A (High
Concentration (1.7mm) Soak)
pdb|2GYO|A Chain A, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A
pdb|2GYO|B Chain B, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A
Length = 317
Score = 32.3 bits (72), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 102 VPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLR 151
V +G EAAT+AI+ G K +I ++ TTS P A Q+ ++G++
Sbjct: 51 VSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK 101
>pdb|3IL9|A Chain A, Structure Of E. Coli Fabh
pdb|3IL9|B Chain B, Structure Of E. Coli Fabh
Length = 340
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 102 VPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLR 151
V +G EAAT+AI+ G K +I ++ TTS P A Q+ ++G++
Sbjct: 74 VSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK 124
>pdb|2GE9|A Chain A, Solution Structures Of The Sh2 Domain Of Bruton's Tyrosine
Kinase
Length = 125
Score = 31.2 bits (69), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 97 IVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKR 156
+V + K GK + K G P+ I H + C+T P + Y L + L ++
Sbjct: 36 FIVRDSSKAGKYTVSVFAKSTGDPQGVIRHYVVCST-----PQSQYYLAEK-HLFSTIPE 89
Query: 157 FMMYQQGCFAGGTVLRLAKDLAENNKGA 184
+ Y Q A G + RL +++ NK A
Sbjct: 90 LINYHQHNSA-GLISRLKYPVSQQNKNA 116
>pdb|1HNH|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii +
Degraded Form Of Acetyl-Coa
Length = 317
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 102 VPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLR 151
V G EAAT+AI+ G K +I ++ TTS P A Q+ +G++
Sbjct: 51 VSTXGFEAATRAIEXAGIEKDQIGLIVVATTSATHAFPSAACQIQSXLGIK 101
>pdb|1EBL|A Chain A, The 1.8 A Crystal Structure And Active Site Architecture
Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii
(Fabh) From Escherichia Coli
pdb|1EBL|B Chain B, The 1.8 A Crystal Structure And Active Site Architecture
Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii
(Fabh) From Escherichia Coli
Length = 317
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 102 VPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVD-MPGADYQLTKLIGLR 151
V G EAAT+AI+ G K +I ++ TTS P A Q+ +G++
Sbjct: 51 VSTXGFEAATRAIEXAGIEKDQIGLIVVATTSATHAFPSAACQIQSXLGIK 101
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Fbp, Pg, Mn2+ And K+
pdb|1A3W|B Chain B, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Fbp, Pg, Mn2+ And K+
pdb|1A3X|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Pg, Mn2+ And K+
pdb|1A3X|B Chain B, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Pg, Mn2+ And K+
Length = 500
Score = 28.1 bits (61), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 38/198 (19%)
Query: 7 IRNAQRAD----GPATVLAIGTATP----AHSVNQADYPDYYFRITKSEHMT-ELKEKFK 57
I NA++++ G +A+ T P + N DYP I + M +K+
Sbjct: 64 IDNARKSEELYPGRPLAIALDTKGPEIRTGTTTNDVDYP-----IPPNHEMIFTTDDKYA 118
Query: 58 RMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEW 117
+ CD ++ Y +T+ I + Y+ + + Q + VV+ K +K
Sbjct: 119 KACDDKIMYVDYKNITKVI---SAGRIIYVDDGVLSFQVLEVVD---------DKTLKVK 166
Query: 118 GQPKSKITHLIFCTTSGVDMPGADYQLTKLI-----GLRPSVKR--FMMYQQGCFAGGTV 170
KI C+ GV++PG D L L LR VK M++ V
Sbjct: 167 ALNAGKI-----CSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDV 221
Query: 171 LRLAKDLAENNKGARVLV 188
L + + L E K +++V
Sbjct: 222 LTIREVLGEQGKDVKIIV 239
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,919,185
Number of Sequences: 62578
Number of extensions: 410445
Number of successful extensions: 1058
Number of sequences better than 100.0: 59
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 982
Number of HSP's gapped (non-prelim): 60
length of query: 391
length of database: 14,973,337
effective HSP length: 101
effective length of query: 290
effective length of database: 8,652,959
effective search space: 2509358110
effective search space used: 2509358110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)