Your job contains 1 sequence.
>016331
MPASPSFHSDTRKWKRRKREPRKQLNKLDEDDVVEDEDEEQDNNETDNHNNNSNADHRDN
GDDFQHATAPDPASNETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAAYLAGDA
SGRSSAVALENISFGQLQALSVVPADSAALDPERSDTSCVITPPQIMEGKGVVKRFGSRV
HVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIV
SDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA
LKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNYCSQPIPAVYY
QSQKEVDGRFSPLTFVYLFICLFLSSVYLPA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016331
(391 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2036942 - symbol:SWI3C "SWITCH/sucrose nonferm... 980 1.0e-98 1
CGD|CAL0002007 - symbol:orf19.4488 species:5476 "Candida ... 192 5.9e-12 1
DICTYBASE|DDB_G0277033 - symbol:swi3 "SWIRM domain-contai... 189 1.7e-11 1
UNIPROTKB|G5EF87 - symbol:swsn-1 "SWI3-like protein" spec... 181 7.8e-11 1
WB|WBGene00004203 - symbol:swsn-1 species:6239 "Caenorhab... 181 7.8e-11 1
UNIPROTKB|F1PVA9 - symbol:SMARCC2 "Uncharacterized protei... 182 9.4e-11 1
UNIPROTKB|F1N4N6 - symbol:SMARCC2 "Uncharacterized protei... 182 9.4e-11 1
UNIPROTKB|F1SM00 - symbol:LOC100621845 "Uncharacterized p... 182 1.0e-10 1
UNIPROTKB|I3LRY4 - symbol:I3LRY4 "Uncharacterized protein... 182 1.1e-10 1
MGI|MGI:1915344 - symbol:Smarcc2 "SWI/SNF related, matrix... 182 1.1e-10 1
UNIPROTKB|Q8TAQ2 - symbol:SMARCC2 "SWI/SNF complex subuni... 182 1.1e-10 1
UNIPROTKB|F8VXC8 - symbol:SMARCC2 "SWI/SNF complex subuni... 182 1.1e-10 1
UNIPROTKB|F1P1A8 - symbol:F1P1A8 "Uncharacterized protein... 181 1.1e-10 1
RGD|1597704 - symbol:Smarcc2 "SWI/SNF related, matrix ass... 181 1.3e-10 1
SGD|S000003712 - symbol:SWI3 "Subunit of the SWI/SNF chro... 179 1.4e-10 1
ZFIN|ZDB-GENE-080514-3 - symbol:smarcc1a "SWI/SNF related... 180 1.6e-10 1
MGI|MGI:1203524 - symbol:Smarcc1 "SWI/SNF related, matrix... 179 2.1e-10 1
UNIPROTKB|E2REF0 - symbol:SMARCC1 "Uncharacterized protei... 178 2.7e-10 1
UNIPROTKB|G3N0H4 - symbol:SMARCC1 "Uncharacterized protei... 177 2.8e-10 1
UNIPROTKB|F1MYU1 - symbol:SMARCC1 "Uncharacterized protei... 177 2.9e-10 1
ZFIN|ZDB-GENE-060503-273 - symbol:smarcc1b "SWI/SNF relat... 177 2.9e-10 1
UNIPROTKB|I3LJ29 - symbol:SMARCC1 "Uncharacterized protei... 172 4.3e-10 1
UNIPROTKB|F1SLI6 - symbol:LOC100626030 "Uncharacterized p... 172 1.1e-09 1
RGD|1304850 - symbol:Smarcc1 "SWI/SNF related, matrix ass... 172 1.2e-09 1
UNIPROTKB|Q92922 - symbol:SMARCC1 "SWI/SNF complex subuni... 172 1.3e-09 1
POMBASE|SPAC23H3.10 - symbol:ssr2 "SWI/SNF and RSC comple... 167 1.4e-09 1
POMBASE|SPAC17G6.10 - symbol:ssr1 "SWI/SNF and RSC comple... 155 1.6e-09 2
ASPGD|ASPL0000005061 - symbol:AN6705 species:162425 "Emer... 167 2.4e-09 1
TAIR|locus:2051028 - symbol:SWI3B "switch subunit 3" spec... 164 2.8e-09 1
FB|FBgn0002783 - symbol:mor "moira" species:7227 "Drosoph... 167 5.1e-09 1
UNIPROTKB|G4MV88 - symbol:MGG_01720 "Transcription regula... 159 2.0e-08 1
TAIR|locus:2043263 - symbol:SWI3A "SWITCH/sucrose nonferm... 151 9.4e-08 1
SGD|S000001933 - symbol:RSC8 "Component of the RSC chroma... 142 1.1e-06 1
CGD|CAL0003837 - symbol:orf19.7234 species:5476 "Candida ... 127 5.1e-05 1
>TAIR|locus:2036942 [details] [associations]
symbol:SWI3C "SWITCH/sucrose nonfermenting 3C"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
HSSP:P32591 eggNOG:COG5259 EMBL:AC007727 KO:K11649 EMBL:AY091026
EMBL:AY117245 IPI:IPI00532467 PIR:D86350 RefSeq:NP_173589.1
UniGene:At.41645 ProteinModelPortal:Q9XI07 SMR:Q9XI07 IntAct:Q9XI07
STRING:Q9XI07 PaxDb:Q9XI07 PRIDE:Q9XI07 EnsemblPlants:AT1G21700.1
GeneID:838774 KEGG:ath:AT1G21700 TAIR:At1g21700
HOGENOM:HOG000243996 InParanoid:Q9XI07 OMA:VAASCAH PhylomeDB:Q9XI07
ProtClustDB:CLSN2679743 Genevestigator:Q9XI07 Uniprot:Q9XI07
Length = 807
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 202/314 (64%), Positives = 233/314 (74%)
Query: 62 DDFQH--ATAPDPASNETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAAYLAGD 119
D+ Q PDP EV+ D G+RI +FP V+RVV RPH SVM +VA E A L G+
Sbjct: 54 DELQQNGGATPDPGLGIGEVVEDSGSRISDFPAVVKRVVIRPHASVMAVVAAERAGLIGE 113
Query: 120 ASGRSSAVALENISFGQLQALSVVPADSAALDPERSDTSC---VITPPQIMEGKGVVKRF 176
G+ S ALENISFGQLQALS VPADS LD ERSD S VI+PP IM+G+GVVKRF
Sbjct: 114 TRGQGSLPALENISFGQLQALSTVPADS--LDLERSDGSSSAYVISPPPIMDGEGVVKRF 171
Query: 177 GSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEK 236
G VHVLPMHSDWF+P+TV RLERQVVP FFSGKSP+HTPE YME RN IV+KY++NPEK
Sbjct: 172 GDLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEK 231
Query: 237 RLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEPWNRGSYLREDSNGEVS 295
L +SDCQGLVDGV ED R+FRFL+HWGIINYCA QS P P S +RED+NGEV+
Sbjct: 232 TLTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVN 291
Query: 296 VPSDALKSIDSLIKFDKPKCSLKVADVYSS--SCGGADFFDLDNTIRERLSENHCNYCSQ 353
VPS AL SIDSLIKFDKP C K +VYSS S G D DLD IRE L ++HCN+CS+
Sbjct: 292 VPSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDG-DSPDLDIRIREHLCDSHCNHCSR 350
Query: 354 PIPAVYYQSQKEVD 367
P+P VY+QSQK+ D
Sbjct: 351 PLPTVYFQSQKKGD 364
>CGD|CAL0002007 [details] [associations]
symbol:orf19.4488 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0044109 "cellular alcohol
catabolic process" evidence=IEA] [GO:0031496 "positive regulation
of mating type switching" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0005987 "sucrose catabolic
process" evidence=IEA] [GO:0000436 "carbon catabolite activation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
CGD:CAL0002007 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AACQ01000141 KO:K11772
RefSeq:XP_712915.1 ProteinModelPortal:Q59TH7 SMR:Q59TH7
STRING:Q59TH7 GeneID:3645438 KEGG:cal:CaO19.4488 Uniprot:Q59TH7
Length = 971
Score = 192 (72.6 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 46/134 (34%), Positives = 74/134 (55%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
V+P ++ WF+ +H++E++ +P FF P +P+ Y+ RN ++ Y NP + L ++
Sbjct: 421 VIPSYASWFNMKKIHKIEKESLPEFFDSIHPSKSPKLYVNYRNFMINSYRLNPNEFLTLT 480
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA 300
C+ LV V L R+ RFLN WG+INY Q +P G L + NG+ S+ D
Sbjct: 481 SCRRNLVGDVGT--LMRVHRFLNKWGLINYQVRPQF-KP---GYALEKMPNGQ-SM--DL 531
Query: 301 LKSIDSLIKFDKPK 314
+ D +KFD P+
Sbjct: 532 PYTGDYHVKFDTPR 545
>DICTYBASE|DDB_G0277033 [details] [associations]
symbol:swi3 "SWIRM domain-containing protein Swi3"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 InterPro:IPR001357 dictyBase:DDB_G0277033
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000019 SUPFAM:SSF52113 eggNOG:COG5259
KO:K11649 RefSeq:XP_642866.1 ProteinModelPortal:Q550R6 SMR:Q550R6
PRIDE:Q550R6 EnsemblProtists:DDB0219999 GeneID:8620732
KEGG:ddi:DDB_G0277033 InParanoid:Q550R6 OMA:QTTIDMP
ProtClustDB:CLSZ2430855 Uniprot:Q550R6
Length = 1223
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 41/123 (33%), Positives = 64/123 (52%)
Query: 149 ALDPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFS 208
+L + + T+ PQ K V + S + P WF + +H +E+ +P FF+
Sbjct: 611 SLPQQPTTTTTTSVQPQPQPPKNVTLQ--SSFTIPPSQCTWFKMERIHEVEKNQLPEFFT 668
Query: 209 GKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQ-GLVDGVSPEDLTRIFRFLNHWGI 267
GKSP TPE Y E R+ ++ Y+ NP + L ++ + LV V + R+ FL HWG+
Sbjct: 669 GKSPSKTPEVYKEYRDFMINTYLQNPYQYLTLTAIRRNLVGDVC--SILRVHSFLEHWGL 726
Query: 268 INY 270
INY
Sbjct: 727 INY 729
>UNIPROTKB|G5EF87 [details] [associations]
symbol:swsn-1 "SWI3-like protein" species:6239
"Caenorhabditis elegans" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0040018
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 GeneTree:ENSGT00390000018166 EMBL:AF230279
PIR:T26449 RefSeq:NP_001256906.1 UniGene:Cel.7072 SMR:G5EF87
IntAct:G5EF87 EnsemblMetazoa:Y113G7B.23 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 WormBase:Y113G7B.23a
OMA:HFDELEQ NextBio:908892 Uniprot:G5EF87
Length = 789
Score = 181 (68.8 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 119 DASGRSSAVALENISFG-QLQALSVVPADSAALDPERSDTSCVITPPQIMEGKGVVKRFG 177
D RS A + G + A P D + PQ+ EG V+++
Sbjct: 23 DDDSRSGAAVKVEVPKGKEKDAEFSAPKGQKLTDLDEEGVQSTKEAPQLAEGN-VIEQ-- 79
Query: 178 SRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKR 237
+ V+P ++ WF + +H++E++ +P FF+GK+ TP+ Y+ RN +V Y NP +
Sbjct: 80 THYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEY 139
Query: 238 LIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ + C+ + G + R+ FL WG++NY
Sbjct: 140 VSATACRRNLAG-DVCSIVRLHSFLEQWGLLNY 171
>WB|WBGene00004203 [details] [associations]
symbol:swsn-1 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IGI;IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0046662 "regulation of oviposition" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003677
GO:GO:0040018 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 UniGene:Cel.7072 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 RefSeq:NP_001256907.1
ProteinModelPortal:H8ESF3 SMR:H8ESF3 WormBase:Y113G7B.23c
Uniprot:H8ESF3
Length = 792
Score = 181 (68.8 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 119 DASGRSSAVALENISFG-QLQALSVVPADSAALDPERSDTSCVITPPQIMEGKGVVKRFG 177
D RS A + G + A P D + PQ+ EG V+++
Sbjct: 23 DDDSRSGAAVKVEVPKGKEKDAEFSAPKGQKLTDLDEEGVQSTKEAPQLAEGN-VIEQ-- 79
Query: 178 SRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKR 237
+ V+P ++ WF + +H++E++ +P FF+GK+ TP+ Y+ RN +V Y NP +
Sbjct: 80 THYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRNFMVDTYRLNPFEY 139
Query: 238 LIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ + C+ + G + R+ FL WG++NY
Sbjct: 140 VSATACRRNLAG-DVCSIVRLHSFLEQWGLLNY 171
>UNIPROTKB|F1PVA9 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:AAEX03006920 Ensembl:ENSCAFT00000000173
Uniprot:F1PVA9
Length = 1092
Score = 182 (69.1 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 418 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 477
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 478 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 515
>UNIPROTKB|F1N4N6 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
SMART:SM00717 InterPro:IPR001357 GO:GO:0017053 GO:GO:0045892
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GeneTree:ENSGT00390000018166 OMA:QYIQAEP EMBL:DAAA02013534
IPI:IPI00712028 Ensembl:ENSBTAT00000019562 Uniprot:F1N4N6
Length = 1094
Score = 182 (69.1 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 389 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 448
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 449 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 486
>UNIPROTKB|F1SM00 [details] [associations]
symbol:LOC100621845 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CU498845 Ensembl:ENSSSCT00000000410 OMA:AWFDYNX Uniprot:F1SM00
Length = 1167
Score = 182 (69.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 437 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 496
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 497 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 534
>UNIPROTKB|I3LRY4 [details] [associations]
symbol:I3LRY4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:CU694915 Ensembl:ENSSSCT00000032096 Uniprot:I3LRY4
Length = 1212
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 391 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 450
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 451 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 488
>MGI|MGI:1915344 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1915344 GO:GO:0017053 GO:GO:0045892 GO:GO:0045893
GO:GO:0007399 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649
GeneTree:ENSGT00390000018166 OrthoDB:EOG4JHCF5 CTD:6601
ChiTaRS:SMARCC2 EMBL:BC058720 EMBL:BC062102 IPI:IPI00381019
IPI:IPI00459742 RefSeq:NP_001107568.1 RefSeq:NP_001107569.1
RefSeq:NP_937803.1 UniGene:Mm.417338 ProteinModelPortal:Q6PDG5
SMR:Q6PDG5 DIP:DIP-48884N IntAct:Q6PDG5 STRING:Q6PDG5
PhosphoSite:Q6PDG5 PaxDb:Q6PDG5 PRIDE:Q6PDG5
Ensembl:ENSMUST00000026433 Ensembl:ENSMUST00000105235 GeneID:68094
KEGG:mmu:68094 UCSC:uc007hmw.2 UCSC:uc007hmx.2 InParanoid:Q6PDG5
OMA:QYIQAEP NextBio:326404 Bgee:Q6PDG5 Genevestigator:Q6PDG5
GermOnline:ENSMUSG00000025369 Uniprot:Q6PDG5
Length = 1213
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 485 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 522
>UNIPROTKB|Q8TAQ2 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0017053
"transcriptional repressor complex" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0045892 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0003713 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 UniGene:Hs.632717 EMBL:AC073896 HOGENOM:HOG000047736
HOVERGEN:HBG054849 KO:K11649 EMBL:U66616 EMBL:BT009924
EMBL:AB209006 EMBL:BC009067 EMBL:BC013045 EMBL:BC026222
IPI:IPI00150057 IPI:IPI00216047 IPI:IPI00793163
RefSeq:NP_001123892.1 RefSeq:NP_003066.2 RefSeq:NP_620706.1
UniGene:Hs.236030 ProteinModelPortal:Q8TAQ2 SMR:Q8TAQ2
DIP:DIP-27611N IntAct:Q8TAQ2 MINT:MINT-1151033 STRING:Q8TAQ2
PhosphoSite:Q8TAQ2 DMDM:57012959 PaxDb:Q8TAQ2 PeptideAtlas:Q8TAQ2
PRIDE:Q8TAQ2 DNASU:6601 Ensembl:ENST00000267064
Ensembl:ENST00000347471 Ensembl:ENST00000394023 GeneID:6601
KEGG:hsa:6601 UCSC:uc001ska.3 UCSC:uc001skb.3 CTD:6601
GeneCards:GC12M056555 HGNC:HGNC:11105 HPA:CAB004321 HPA:HPA021213
MIM:601734 neXtProt:NX_Q8TAQ2 PharmGKB:PA35955 InParanoid:Q8TAQ2
PhylomeDB:Q8TAQ2 ChiTaRS:SMARCC2 GenomeRNAi:6601 NextBio:25677
ArrayExpress:Q8TAQ2 Bgee:Q8TAQ2 CleanEx:HS_SMARCC2
Genevestigator:Q8TAQ2 GermOnline:ENSG00000139613 Uniprot:Q8TAQ2
Length = 1214
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 485 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 522
>UNIPROTKB|F8VXC8 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 EMBL:AC073896 HGNC:HGNC:11105
ChiTaRS:SMARCC2 OMA:QYIQAEP IPI:IPI01021606
ProteinModelPortal:F8VXC8 SMR:F8VXC8 PRIDE:F8VXC8
Ensembl:ENST00000550164 ArrayExpress:F8VXC8 Bgee:F8VXC8
Uniprot:F8VXC8
Length = 1245
Score = 182 (69.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 485 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 522
>UNIPROTKB|F1P1A8 [details] [associations]
symbol:F1P1A8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778
"WINAC complex" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 OMA:YKKYVHA GeneTree:ENSGT00390000018166
EMBL:AADN02000062 EMBL:AADN02000057 EMBL:AADN02000058
EMBL:AADN02000059 EMBL:AADN02000060 EMBL:AADN02000061
IPI:IPI00575887 Ensembl:ENSGALT00000008096 Uniprot:F1P1A8
Length = 1035
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S I P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 360 DPNKGDQSRSIDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 413
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG+INY
Sbjct: 414 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLINY 472
>RGD|1597704 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
RGD:1597704 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 IPI:IPI00393081 RefSeq:XP_001055673.1
ProteinModelPortal:D4A510 PhosphoSite:D4A510
Ensembl:ENSRNOT00000028244 GeneID:685179 KEGG:rno:685179
UCSC:RGD:1597704 NextBio:729140 ArrayExpress:D4A510 Uniprot:D4A510
Length = 1135
Score = 181 (68.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF ++VH +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 425 IVPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 484
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ L V + R+ FL WG+INY +S P P
Sbjct: 485 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAESRPTP 522
>SGD|S000003712 [details] [associations]
symbol:SWI3 "Subunit of the SWI/SNF chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0003682
"chromatin binding" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IEA;IMP;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000436 "carbon
catabolite activation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0031496
"positive regulation of mating type switching" evidence=IMP]
[GO:0042393 "histone binding" evidence=IPI] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 SGD:S000003712 EMBL:BK006943
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0005987 GO:GO:0043044
GO:GO:0000436 EMBL:X56792 eggNOG:COG5259 OrthoDB:EOG4PZNGG
GeneTree:ENSGT00390000018166 GO:GO:0044109 GO:GO:0031496
EMBL:M84390 EMBL:Z49451 PIR:S26706 RefSeq:NP_012359.1 PDB:2FQ3
PDBsum:2FQ3 ProteinModelPortal:P32591 SMR:P32591 DIP:DIP-2471N
IntAct:P32591 MINT:MINT-563159 STRING:P32591 PaxDb:P32591
PeptideAtlas:P32591 EnsemblFungi:YJL176C GeneID:853264
KEGG:sce:YJL176C CYGD:YJL176c HOGENOM:HOG000142068 KO:K11772
OMA:ERISENC EvolutionaryTrace:P32591 NextBio:973526
Genevestigator:P32591 GermOnline:YJL176C Uniprot:P32591
Length = 825
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
V+P +S WF+ + +H +E Q +P FF+ + P TPE YM RN +V Y NP + V+
Sbjct: 306 VIPSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVT 365
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ V G + L R+ +FL WG+INY
Sbjct: 366 TARRNVSGDAAA-LFRLHKFLTKWGLINY 393
>ZFIN|ZDB-GENE-080514-3 [details] [associations]
symbol:smarcc1a "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily c, member 1a"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-080514-3 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 EMBL:CR391962 IPI:IPI00972152
RefSeq:XP_003200294.1 UniGene:Dr.76866 PRIDE:F1Q9K1
Ensembl:ENSDART00000109259 GeneID:403020 KEGG:dre:403020 CTD:403020
NextBio:20816825 ArrayExpress:F1Q9K1 Bgee:F1Q9K1 Uniprot:F1Q9K1
Length = 1089
Score = 180 (68.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 33/99 (33%), Positives = 58/99 (58%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF +++H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 445 IIPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 504
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
C+ + G + R+ FL WG++NY +S P P
Sbjct: 505 SCRRNLTG-DVCAVMRVHAFLEQWGLVNYQVDAESRPLP 542
>MGI|MGI:1203524 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10090 "Mus musculus" [GO:0001741 "XY body" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006323 "DNA packaging" evidence=TAS] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1203524 GO:GO:0008286 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0006323 GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 CTD:6599
HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649 OMA:YKKYVHA
EMBL:U85614 EMBL:BC052423 EMBL:BC053064 IPI:IPI00125662
IPI:IPI00515361 PIR:T30967 RefSeq:NP_033237.2 UniGene:Mm.85410
ProteinModelPortal:P97496 SMR:P97496 DIP:DIP-39986N IntAct:P97496
MINT:MINT-4084777 STRING:P97496 PhosphoSite:P97496 PaxDb:P97496
PRIDE:P97496 Ensembl:ENSMUST00000088716 Ensembl:ENSMUST00000111969
GeneID:20588 KEGG:mmu:20588 UCSC:uc009rto.1 UCSC:uc009rtp.1
GeneTree:ENSGT00390000018166 InParanoid:P97496 OrthoDB:EOG4JHCF5
NextBio:298891 Bgee:P97496 Genevestigator:P97496
GermOnline:ENSMUSG00000032481 Uniprot:P97496
Length = 1104
Score = 179 (68.1 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 424 DPSKGDPSRSVDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 477
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG++NY
Sbjct: 478 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLVNY 536
>UNIPROTKB|E2REF0 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0008286
GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 CTD:6599 KO:K11649 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:AAEX03012237 EMBL:AAEX03012238
RefSeq:XP_533845.2 ProteinModelPortal:E2REF0
Ensembl:ENSCAFT00000020868 GeneID:476640 KEGG:cfa:476640
NextBio:20852260 Uniprot:E2REF0
Length = 1107
Score = 178 (67.7 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 425 DPSKGDQSRSLDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 478
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG++NY
Sbjct: 479 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLVNY 537
>UNIPROTKB|G3N0H4 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:DAAA02054442 Ensembl:ENSBTAT00000065210 Uniprot:G3N0H4
Length = 925
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 361 DPGKGDQSRSVDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 414
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG++NY
Sbjct: 415 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLVNY 473
>UNIPROTKB|F1MYU1 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006337 "nucleosome
disassembly" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0071564 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:DAAA02054442 IPI:IPI01002084
Ensembl:ENSBTAT00000044741 Uniprot:F1MYU1
Length = 952
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 151 DPERSDTSCVITPPQIMEGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLERQVVPHFFSGK 210
DP + D S + P G+ V + + ++P ++ WF + +H +ER+ +P FF+GK
Sbjct: 361 DPGKGDQSRSVDP-----GEDNVTEQTNHI-IIPSYASWFDYNCIHVIERRALPEFFNGK 414
Query: 211 SPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
+ TPE Y+ RN ++ Y NP++ L + C+ + G + R+ FL WG++NY
Sbjct: 415 NKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTG-DVCAVMRVHAFLEQWGLVNY 473
>ZFIN|ZDB-GENE-060503-273 [details] [associations]
symbol:smarcc1b "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily c,
member 1b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-060503-273 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CR626876 EMBL:CR626877 IPI:IPI00972005
Ensembl:ENSDART00000085619 Bgee:E7FAW0 Uniprot:E7FAW0
Length = 961
Score = 177 (67.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 36/100 (36%), Positives = 57/100 (57%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLI-V 240
++P ++ WF + +H++ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L
Sbjct: 426 IVPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 485
Query: 241 SDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQS-PEP 279
S + L V L R+ FL WG+INY +S P P
Sbjct: 486 SSRRNLTGDVCA--LIRVHSFLEQWGLINYQVDAESRPLP 523
>UNIPROTKB|I3LJ29 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 Ensembl:ENSSSCT00000029308 OMA:EWNISEN
Uniprot:I3LJ29
Length = 532
Score = 172 (65.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 341 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 400
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ + G + R+ FL WG++NY
Sbjct: 401 ACRRNLTG-DVCAVMRVHAFLEQWGLVNY 428
>UNIPROTKB|F1SLI6 [details] [associations]
symbol:LOC100626030 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 EMBL:CU633694 EMBL:CU929897
Ensembl:ENSSSCT00000012417 Uniprot:F1SLI6
Length = 1024
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 452 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 511
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ + G + R+ FL WG++NY
Sbjct: 512 ACRRNLTG-DVCAVMRVHAFLEQWGLVNY 539
>RGD|1304850 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10116 "Rattus norvegicus" [GO:0001741 "XY body"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0008286 "insulin receptor signaling
pathway" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0071778
"WINAC complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 RGD:1304850
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 IPI:IPI00764046
Ensembl:ENSRNOT00000028250 ArrayExpress:D4A4J7 Uniprot:D4A4J7
Length = 1086
Score = 172 (65.6 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 449 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 508
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ + G + R+ FL WG++NY
Sbjct: 509 ACRRNLTG-DVCAVMRVHAFLEQWGLVNY 536
>UNIPROTKB|Q92922 [details] [associations]
symbol:SMARCC1 "SWI/SNF complex subunit SMARCC1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF
complex" evidence=ISS] [GO:0071778 "WINAC complex" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0006337 "nucleosome disassembly"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0003713 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884 PROSITE:PS51293
Pathway_Interaction_DB:ar_tf_pathway SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 EMBL:U66615
EMBL:BC039843 EMBL:BC065253 EMBL:BC113465 EMBL:BC117213
IPI:IPI00234252 RefSeq:NP_003065.3 UniGene:Hs.476179 PDB:2YUS
PDBsum:2YUS ProteinModelPortal:Q92922 SMR:Q92922 DIP:DIP-27545N
DIP:DIP-33044N IntAct:Q92922 MINT:MINT-1137868 STRING:Q92922
PhosphoSite:Q92922 DMDM:209572723 PaxDb:Q92922 PRIDE:Q92922
DNASU:6599 Ensembl:ENST00000254480 GeneID:6599 KEGG:hsa:6599
UCSC:uc003crq.2 CTD:6599 GeneCards:GC03M047626 H-InvDB:HIX0030795
HGNC:HGNC:11104 HPA:CAB011576 HPA:CAB016336 HPA:HPA024352
HPA:HPA026853 MIM:601732 neXtProt:NX_Q92922 PharmGKB:PA35954
HOGENOM:HOG000047736 HOVERGEN:HBG054849 InParanoid:Q92922 KO:K11649
OMA:YKKYVHA OrthoDB:EOG4V9TSW PhylomeDB:Q92922 ChiTaRS:SMARCC1
EvolutionaryTrace:Q92922 GenomeRNAi:6599 NextBio:25671
ArrayExpress:Q92922 Bgee:Q92922 CleanEx:HS_SMARCC1
Genevestigator:Q92922 GermOnline:ENSG00000173473 Uniprot:Q92922
Length = 1105
Score = 172 (65.6 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF + +H +ER+ +P FF+GK+ TPE Y+ RN ++ Y NP++ L +
Sbjct: 450 IIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTST 509
Query: 242 DCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ + G + R+ FL WG++NY
Sbjct: 510 ACRRNLTG-DVCAVMRVHAFLEQWGLVNY 537
>POMBASE|SPAC23H3.10 [details] [associations]
symbol:ssr2 "SWI/SNF and RSC complex subunit Ssr2"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IC] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0016586 "RSC complex" evidence=IDA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS01357 PROSITE:PS50135
PROSITE:PS50934 SMART:SM00291 SMART:SM00717 PomBase:SPAC23H3.10
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000790 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016586 eggNOG:COG5259
OrthoDB:EOG4PZNGG KO:K11649 EMBL:D89227 PIR:T38303 PIR:T43061
RefSeq:NP_593800.1 ProteinModelPortal:O14470 SMR:O14470
DIP:DIP-48383N STRING:O14470 EnsemblFungi:SPAC23H3.10.1
GeneID:2541851 KEGG:spo:SPAC23H3.10 OMA:TEYLTIT NextBio:20802939
Uniprot:O14470
Length = 503
Score = 167 (63.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 33/90 (36%), Positives = 51/90 (56%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P ++ WF +H +ER+ P FF+GKSP TP Y + R+ ++ Y P + L V+
Sbjct: 19 IVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVT 78
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ LV V + R+ FL WG+INY
Sbjct: 79 ACRRNLVGDVCA--IIRVHAFLEQWGLINY 106
>POMBASE|SPAC17G6.10 [details] [associations]
symbol:ssr1 "SWI/SNF and RSC complex subunit Ssr1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0016586 "RSC complex" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=NAS] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 PomBase:SPAC17G6.10 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000122
GO:GO:0000790 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0016586 HSSP:P32591 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 PIR:T37842 RefSeq:NP_594257.1 ProteinModelPortal:O13788
DIP:DIP-48380N STRING:O13788 EnsemblFungi:SPAC17G6.10.1
GeneID:2542400 KEGG:spo:SPAC17G6.10 OMA:LCARCYV NextBio:20803459
Uniprot:O13788
Length = 527
Score = 155 (59.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 58/206 (28%), Positives = 92/206 (44%)
Query: 143 VPADSAALDPERSDTSCVI-TPPQIM-EGKGVVKRFGSRVHVLPMHSDWFSPDTVHRLER 200
VP DSA P D S T P++ E K + +V V P + WF VH +E+
Sbjct: 16 VP-DSA--QPMELDVSKKEDTEPEVRDEAKEFLLSQLPQVEV-PEWAQWFDFSKVHEIEK 71
Query: 201 QVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVSDCQ-GLVDGVSPEDLTRIF 259
+ P FF GK+ TPE Y E R+ +++ + N + L + C+ L V + R+
Sbjct: 72 KQNPEFFDGKNTSKTPEVYKEYRDFMISTFRLNSKVYLTFTACRRNLAGDVCA--VLRVH 129
Query: 260 RFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDALKSIDSLIKFDKPKCSL-- 317
RFL WG+INY + P R S + S + +D + + L+ P S+
Sbjct: 130 RFLEQWGLINY-----NVNPDTRPSKIGPPSTSHFQILADTPRGLVPLLP--PPSSSIPR 182
Query: 318 -KVADVYSSSCGGADFFD--LDNTIR 340
K + S + +D LD+ ++
Sbjct: 183 SKAVTIEDPSIVRTNIYDPSLDDVLK 208
Score = 54 (24.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 336 DNTIRERLSENHCNYCSQPIPAVYYQSQ 363
+N I + S HC C YYQSQ
Sbjct: 225 ENNIDQSDSPQHCYCCGNKFNESYYQSQ 252
>ASPGD|ASPL0000005061 [details] [associations]
symbol:AN6705 species:162425 "Emericella nidulans"
[GO:0016586 "RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015616 "DNA translocase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:BN001301 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACD01000112 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 RefSeq:XP_664309.1 ProteinModelPortal:Q5AYC5
STRING:Q5AYC5 EnsemblFungi:CADANIAT00007492 GeneID:2870489
KEGG:ani:AN6705.2 HOGENOM:HOG000180903 OMA:SKTPAVY Uniprot:Q5AYC5
Length = 681
Score = 167 (63.8 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 178 SRVH--VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPE 235
S+ H +LP +S WF T+H +E++ + FF+G++ TP Y + R+ ++ Y NP
Sbjct: 100 SQTHAIILPSYSTWFDMHTIHPIEKKALAEFFNGRNRSKTPAVYKDYRDFMINTYRLNPI 159
Query: 236 KRLIVSDCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEV 294
+ L V+ C+ L V + R+ FL WG+INY +P R S + G
Sbjct: 160 EYLTVTACRRNLAGDVCA--IMRVHSFLEQWGLINY-----QVDPQTRPSNIGPPFTGHF 212
Query: 295 SVPSDALKSIDSLIK----FDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNY 350
V +D + + F KP L + ++S + DL+ IR + ++
Sbjct: 213 RVIADTPRGLQPFQPGPNHFVKPGKPLAATE-RAASATPTNKADLNLEIRRNIYDDKGK- 270
Query: 351 CSQPIPAVYYQSQKEVDGRFS 371
+ PAV + +K+ +G S
Sbjct: 271 --EVTPAVEAK-EKQANGESS 288
>TAIR|locus:2051028 [details] [associations]
symbol:SWI3B "switch subunit 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0040029 "regulation
of gene expression, epigenetic" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0007275 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 EMBL:AC002332 HSSP:P32591
eggNOG:COG5259 KO:K11649 OMA:LCARCYV EMBL:BT004085 EMBL:BT005094
IPI:IPI00525437 PIR:F84747 RefSeq:NP_180919.2 UniGene:At.43725
ProteinModelPortal:Q84JG2 SMR:Q84JG2 IntAct:Q84JG2 STRING:Q84JG2
PaxDb:Q84JG2 PRIDE:Q84JG2 EnsemblPlants:AT2G33610.1 GeneID:817927
KEGG:ath:AT2G33610 TAIR:At2g33610 HOGENOM:HOG000238867
InParanoid:Q84JG2 PhylomeDB:Q84JG2 ProtClustDB:CLSN2680010
Genevestigator:Q84JG2 Uniprot:Q84JG2
Length = 469
Score = 164 (62.8 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 180 VHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLI 239
+HV P +S WFS ++ E + +P FF +S P+ Y+ RN I+ +Y D+ +++
Sbjct: 48 IHV-PSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKIS 106
Query: 240 VSDCQG-LVDGVSPEDLTRIFRFLNHWGIINY-CAAVQSPEPWNRGSYLREDSNGEVSVP 297
+D + LV V + R+F FL+ WG+INY +A P W + + S P
Sbjct: 107 FTDVRRTLVSDVV--SIRRVFDFLDSWGLINYNSSASAKPLKWEEKE-AGKSAGDAASEP 163
Query: 298 SDALKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENH 347
+ +K K C+ A + S +C D +DL R + N+
Sbjct: 164 ATTVKETA------KRNCNGCKA-ICSIACFACDKYDLTLCARCYVRSNY 206
>FB|FBgn0002783 [details] [associations]
symbol:mor "moira" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=NAS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS;IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0035060
"brahma complex" evidence=IDA;NAS;TAS] [GO:0003713 "transcription
coactivator activity" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0008586 "imaginal
disc-derived wing vein morphogenesis" evidence=IMP] [GO:0007474
"imaginal disc-derived wing vein specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357 EMBL:AE014297
GO:GO:0045893 GO:GO:0022008 GO:GO:0003677 GO:GO:0008586
GO:GO:0007474 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0007480 SUPFAM:SSF52113 GO:GO:0045749
GO:GO:0043044 GO:GO:0008587 GO:GO:0035060 KO:K11649
GeneTree:ENSGT00390000018166 OMA:QYIQAEP FlyBase:FBgn0002783
EMBL:AF071502 EMBL:BT031130 PIR:T13153 RefSeq:NP_524373.1
UniGene:Dm.2417 SMR:Q9VF03 DIP:DIP-38882N IntAct:Q9VF03
MINT:MINT-6541278 STRING:Q9VF03 EnsemblMetazoa:FBtr0083238
GeneID:41942 KEGG:dme:Dmel_CG18740 UCSC:CG18740-RA CTD:41942
InParanoid:Q9VF03 GenomeRNAi:41942 NextBio:826387 Uniprot:Q9VF03
Length = 1209
Score = 167 (63.8 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
++P +S WF +++H +E++ +P FF+ K+ TPE YM RN ++ Y NP + L +
Sbjct: 451 IVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTST 510
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINY 270
C+ L V + R+ FL WG+INY
Sbjct: 511 ACRRNLAGDVCA--IMRVHAFLEQWGLINY 538
>UNIPROTKB|G4MV88 [details] [associations]
symbol:MGG_01720 "Transcription regulatory protein SWI3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:CM001232 KO:K11649 RefSeq:XP_003714717.1
ProteinModelPortal:G4MV88 EnsemblFungi:MGG_01720T0 GeneID:2679776
KEGG:mgr:MGG_01720 Uniprot:G4MV88
Length = 704
Score = 159 (61.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 33/100 (33%), Positives = 55/100 (55%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIVS 241
VLP ++ WF + ++ +E++ +P FF+ ++ TP Y + R+ ++ Y NP + L V+
Sbjct: 138 VLPSYTVWFDMNAINNIEKKALPEFFNSRNRSKTPAVYKDYRDFMINTYRLNPAEYLTVT 197
Query: 242 DCQ-GLVDGVSPEDLTRIFRFLNHWGIINYCA-AVQSPEP 279
C+ L V + R+ FL WG+INY A Q P P
Sbjct: 198 ACRRNLAGDVCA--IMRVHAFLEQWGLINYQVDAEQRPAP 235
>TAIR|locus:2043263 [details] [associations]
symbol:SWI3A "SWITCH/sucrose nonfermenting 3A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0016514 "SWI/SNF complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
EMBL:AC002535 HSSP:P32591 eggNOG:COG5259 KO:K11649 EMBL:AY062794
EMBL:AY081570 IPI:IPI00529579 PIR:T00422 RefSeq:NP_850476.1
UniGene:At.27229 ProteinModelPortal:Q8W475 SMR:Q8W475 IntAct:Q8W475
STRING:Q8W475 PaxDb:Q8W475 PRIDE:Q8W475 EnsemblPlants:AT2G47620.1
GeneID:819375 KEGG:ath:AT2G47620 TAIR:At2g47620
HOGENOM:HOG000083881 InParanoid:Q8W475 OMA:SCPKEIF PhylomeDB:Q8W475
ProtClustDB:CLSN2680302 Genevestigator:Q8W475 Uniprot:Q8W475
Length = 512
Score = 151 (58.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 44/193 (22%), Positives = 95/193 (49%)
Query: 180 VHVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLI 239
++ +P S WF D +H +ER+ FF+ S TP+ Y E R+ I+ K+ ++ +RL
Sbjct: 12 LYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDTCRRLT 71
Query: 240 VSDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNR--GSYLREDSNGEVSVP 297
+ + + G L ++F FL WG+IN+ ++++ + + + + + + V
Sbjct: 72 FTSVRKFLVG-DVNLLQKVFLFLEKWGLINFSSSLKKNDHLLSVDNAKIEQGTPAGIRVT 130
Query: 298 S--DALKSIDS--LIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNYCSQ 353
+ ++L+ I + L++ ++ + +KV + S S +D D+ + C +C +
Sbjct: 131 ATPNSLRPITAPPLVE-ERVETGIKVPPLTSYSDVFSDLKKPDHVLV-------CAHCGE 182
Query: 354 PIPAVYYQSQKEV 366
+ +YQ K +
Sbjct: 183 RCDSPFYQHNKGI 195
>SGD|S000001933 [details] [associations]
symbol:RSC8 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP;IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 SGD:S000001933 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0000082 GO:GO:0008270 EMBL:D50617 EMBL:BK006940
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 GO:GO:0006303 eggNOG:COG5259 EMBL:AY692841 PIR:S56292
RefSeq:NP_116695.3 RefSeq:NP_116697.3 ProteinModelPortal:P43609
SMR:P43609 DIP:DIP-1478N IntAct:P43609 MINT:MINT-401637
STRING:P43609 PaxDb:P43609 PeptideAtlas:P43609 EnsemblFungi:YFR037C
GeneID:850598 GeneID:850600 KEGG:sce:YFR037C KEGG:sce:YFR039C
CYGD:YFR037c HOGENOM:HOG000246692 KO:K11762 OMA:PYEYLTI
OrthoDB:EOG4PZNGG NextBio:966460 Genevestigator:P43609
GermOnline:YFR037C Uniprot:P43609
Length = 557
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 33/109 (30%), Positives = 56/109 (51%)
Query: 165 QIMEGKGVVKRF-GSRVH--VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYME 221
Q +E K + RF + H ++P + WF +H +E++ P FF+ S TP+ Y +
Sbjct: 63 QKLEEKAL--RFLAKQTHPVIIPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKD 120
Query: 222 CRNHIVAKYMDNPEKRLIVSDCQGLVDGVSPEDLTRIFRFLNHWGIINY 270
RN I+ Y +P + L ++ + V + + +I FL WG+INY
Sbjct: 121 TRNFIINTYRLSPYEYLTITAVRRNV-AMDVASIVKIHAFLEKWGLINY 168
>CGD|CAL0003837 [details] [associations]
symbol:orf19.7234 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0015616 "DNA
translocase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 CGD:CAL0003837 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACQ01000092 eggNOG:COG5259 KO:K11762
RefSeq:XP_715034.1 ProteinModelPortal:Q59ZV7 STRING:Q59ZV7
GeneID:3643306 KEGG:cal:CaO19.7234 Uniprot:Q59ZV7
Length = 561
Score = 127 (49.8 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 47/201 (23%), Positives = 84/201 (41%)
Query: 182 VLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDH-TPEKYMECRNHIVAKYMDNPEKRLIV 240
++P + WF +H +E++ +P FF + + + Y R+ IV + NP++ L +
Sbjct: 64 IVPSFAKWFDLSKIHDIEKKSLPDFFVEDGSGYKSSQDYKYIRDFIVNTFRLNPKEYLTI 123
Query: 241 SDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA 300
+ + + G ++ RI +FL WG+INY +P + S L G + DA
Sbjct: 124 TAVRRNLSG-DVTNIIRIHQFLEQWGLINY-----QIDPKTKSSVLGPQYTGHFQITLDA 177
Query: 301 LKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNYCSQPIPAVYY 360
+ L+ F L A S+ D DL+N EN + VY
Sbjct: 178 PQG---LVPFVPENAELTKAT--PSNVTKTD--DLNNENIPTAKENELPLNLEIRRNVYA 230
Query: 361 QSQKEVDGRFSPLTFVYLFIC 381
+K+ + + + + IC
Sbjct: 231 TGEKKTNYKTNNIVHYSCSIC 251
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 391 344 0.00097 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 613 (65 KB)
Total size of DFA: 251 KB (2134 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.42u 0.11s 28.53t Elapsed: 00:00:01
Total cpu time: 28.42u 0.11s 28.53t Elapsed: 00:00:01
Start: Sat May 11 01:02:17 2013 End: Sat May 11 01:02:18 2013