BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016336
(391 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AZB8|HARB1_DANRE Putative nuclease HARBI1 OS=Danio rerio GN=harbi1 PE=2 SV=1
Length = 349
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 145/307 (47%), Gaps = 27/307 (8%)
Query: 41 KRINGFQSPLKGLDKFKSVFKISRRTFDYICSLVEEKMVVKTGGFSFTSGKHLSFRDQVA 100
K ++ F D + F R Y+ L+++ ++ +T + +S Q+
Sbjct: 20 KTLDRFDIETVSDDFLLNTFGFPREFIYYLVELLKDSLLRRT-----QRSRAISPDVQIL 74
Query: 101 IALRRLSSGDSLMSIGDSCGLHHSTVSQVTWRFVEAMEQKGLQHLQWP-SETEMAEIKSK 159
AL +SG +GD+ G+ +++S+ +A+ +K + + + E + K +
Sbjct: 75 AALGFYTSGSFQSKMGDAIGISQASMSRCVSNVTKALIEKAPEFIGFTRDEATKQQFKDE 134
Query: 160 FEKIQGLPNCCGVIDTTHILMCLPSSDPTNNLWLDHMKNHSMVLQAIVDPEMRFRDIVTG 219
F +I G+PN GV+D HI + P++D ++ +++ HS+ Q + D T
Sbjct: 135 FYRIAGIPNVTGVVDCAHIAIKAPNADDSS--YVNKKGFHSINCQLVCDARGLLLSAETH 192
Query: 220 WPGKMEDRLIFRSSNFYKLCEEGKRLNGKILELSGGSEIREYIIGDSGYPFLPYLVTPYK 279
WPG + DR +F+ SN KL EE + ++ +++GD+ YP +L+TP +
Sbjct: 193 WPGSLTDRAVFKQSNVAKLFEEQE------------NDDEGWLLGDNRYPLKKWLMTPVQ 240
Query: 280 GQELPELGSEFNRRHSASHLVAQRALARLKDKWKIIQG----VMWRPDKHKLPRIILVCC 335
E P +N H+ +H + R ++ +++ + G + + P+ K II CC
Sbjct: 241 SPESPA-DYRYNLAHTTTHEIVDRTFRAIQTRFRCLDGAKGYLQYSPE--KCSHIIQACC 297
Query: 336 LLHNIVI 342
+LHNI +
Sbjct: 298 VLHNISL 304
>sp|Q8BR93|HARB1_MOUSE Putative nuclease HARBI1 OS=Mus musculus GN=Harbi1 PE=2 SV=1
Length = 349
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 159/351 (45%), Gaps = 43/351 (12%)
Query: 51 KGLDKFK----------SVFKISRRTFDYICSLVEEKMVVKTGGFSFTSGKHLSFRDQVA 100
+ LD+FK S++ R+ ++ L+ + T + +S Q+
Sbjct: 20 RTLDRFKLDDVTDEYLMSMYGFPRQFIYFLVELLGASLSRPT-----QRSRAISPETQIL 74
Query: 101 IALRRLSSGDSLMSIGDSCGLHHSTVSQVTWRFVEAMEQKGLQHLQWP-SETEMAEIKSK 159
AL +SG +GD+ G+ +++S+ EA+ ++ Q + +P E + +K +
Sbjct: 75 AALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALVERASQFIHFPVDEAAVQSLKDE 134
Query: 160 FEKIQGLPNCCGVIDTTHILMCLPSSDPTNNLWLDHMKNHSMVLQAIVDPEMRFRDIVTG 219
F + G+P GV D H+ + P+++ + +++ HS+ + D + T
Sbjct: 135 FYGLAGMPGVIGVADCIHVAIKAPNAEDLS--YVNRKGLHSLNCLVVCDIRGALMTVETS 192
Query: 220 WPGKMEDRLIFRSSNFYKLCEEGKRLNGKILELSGGSEIREYIIGDSGYPFLPYLVTPYK 279
WPG ++D + + S+ E G + +++GDS + +L+TP
Sbjct: 193 WPGSLQDCAVLQRSSLTSQFETGMPKD-------------SWLLGDSSFFLRSWLLTPLP 239
Query: 280 GQELPELGSE--FNRRHSASHLVAQRALARLKDKWKIIQG----VMWRPDKHKLPRIILV 333
+PE +E +NR HSA+H V +R L L +++ + G + + P+ K IIL
Sbjct: 240 ---IPETAAEYRYNRAHSATHSVIERTLQTLCCRFRCLDGSKGALQYSPE--KCSHIILA 294
Query: 334 CCLLHNIVIDL-EDEMQDEIPLLHDHDSGYHQQVCETADMEGEYLRDKLSL 383
CC+LHNI +D D +P D + E+ D+E + +R +L L
Sbjct: 295 CCVLHNISLDHGMDVWSSPVPGPIDQPPEGEDEHMESLDLEADRIRQELIL 345
>sp|B0BN95|HARB1_RAT Putative nuclease HARBI1 OS=Rattus norvegicus GN=Harbi1 PE=2 SV=1
Length = 349
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 144/310 (46%), Gaps = 42/310 (13%)
Query: 51 KGLDKFK----------SVFKISRRTFDYICSLVEEKMVVKTGGFSFTSGKHLSFRDQVA 100
+ LD+FK S++ R+ Y+ L+ + T + +S Q+
Sbjct: 20 RTLDRFKLDDVTDEYLMSMYGFPRQFIYYLVELLGASLSRPT-----QRSRAISPETQIL 74
Query: 101 IALRRLSSGDSLMSIGDSCGLHHSTVSQVTWRFVEAMEQKGLQHLQWPS-ETEMAEIKSK 159
AL +SG +GD+ G+ +++S+ EA+ ++ Q + +P+ E + +K +
Sbjct: 75 AALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALVERASQFIHFPADEAAIQSLKDE 134
Query: 160 FEKIQGLPNCCGVIDTTHILMCLPSSDPTNNLWLDHMKNHSMVLQAIVDPEMRFRDIVTG 219
F + G+P G +D H+ + P+++ + +++ HS+ + D + T
Sbjct: 135 FYGLAGMPGVIGAVDCIHVAIKAPNAEDLS--YVNRKGLHSLNCLVVCDIRGALMTVETS 192
Query: 220 WPGKMEDRLIFRSSNFYKLCEEGKRLNGKILELSGGSEIREYIIGDSGYPFLPYLVTPYK 279
WPG ++D + + S+ E G + +++GDS + +L+TP
Sbjct: 193 WPGSLQDCAVLQQSSLSSQFETGMPKDS-------------WLLGDSSFFLHTWLLTPL- 238
Query: 280 GQELPELGSE--FNRRHSASHLVAQRALARLKDKWKIIQG----VMWRPDKHKLPRIILV 333
+PE +E +NR HSA+H V ++ L L +++ + G + + P+K IIL
Sbjct: 239 --HIPETPAEYRYNRAHSATHSVIEKTLRTLCCRFRCLDGSKGALQYSPEKSS--HIILA 294
Query: 334 CCLLHNIVID 343
CC+LHNI ++
Sbjct: 295 CCVLHNISLE 304
>sp|Q96MB7|HARB1_HUMAN Putative nuclease HARBI1 OS=Homo sapiens GN=HARBI1 PE=1 SV=1
Length = 349
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 144/310 (46%), Gaps = 42/310 (13%)
Query: 51 KGLDKFK----------SVFKISRRTFDYICSLVEEKMVVKTGGFSFTSGKHLSFRDQVA 100
+ LD+FK S++ R+ Y+ L+ + T + +S QV
Sbjct: 20 RTLDRFKLDDVTDEYLMSMYGFPRQFIYYLVELLGANLSRPT-----QRSRAISPETQVL 74
Query: 101 IALRRLSSGDSLMSIGDSCGLHHSTVSQVTWRFVEAMEQKGLQHLQWPS-ETEMAEIKSK 159
AL +SG +GD+ G+ +++S+ EA+ ++ Q +++P+ E + +K +
Sbjct: 75 AALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALVERASQFIRFPADEASIQALKDE 134
Query: 160 FEKIQGLPNCCGVIDTTHILMCLPSSDPTNNLWLDHMKNHSMVLQAIVDPEMRFRDIVTG 219
F + G+P GV+D H+ + P+++ + +++ HS+ + D + T
Sbjct: 135 FYGLAGMPGVMGVVDCIHVAIKAPNAEDLS--YVNRKGLHSLNCLMVCDIRGTLMTVETN 192
Query: 220 WPGKMEDRLIFRSSNFYKLCEEGKRLNGKILELSGGSEIREYIIGDSGYPFLPYLVTPYK 279
WPG ++D + + S+ E G + +++GDS + +L+TP
Sbjct: 193 WPGSLQDCAVLQQSSLSSQFEAGMHKDS-------------WLLGDSSFFLRTWLMTPL- 238
Query: 280 GQELPELGSE--FNRRHSASHLVAQRALARLKDKWKIIQG----VMWRPDKHKLPRIILV 333
+PE +E +N HSA+H V ++ L +++ + G + + P+K IIL
Sbjct: 239 --HIPETPAEYRYNMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSS--HIILA 294
Query: 334 CCLLHNIVID 343
CC+LHNI ++
Sbjct: 295 CCVLHNISLE 304
>sp|Q17QR8|HARB1_BOVIN Putative nuclease HARBI1 OS=Bos taurus GN=HARBI1 PE=2 SV=1
Length = 349
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 143/310 (46%), Gaps = 42/310 (13%)
Query: 51 KGLDKFK----------SVFKISRRTFDYICSLVEEKMVVKTGGFSFTSGKHLSFRDQVA 100
+ LD+FK S++ R+ Y+ L+ + T + +S Q+
Sbjct: 20 RTLDRFKLDDVTDEYLMSMYGFPRQFIYYLVELLGASLSRPT-----QRSRAISPETQIL 74
Query: 101 IALRRLSSGDSLMSIGDSCGLHHSTVSQVTWRFVEAMEQKGLQHLQWPS-ETEMAEIKSK 159
AL +SG +GD+ G+ +++S+ EA+ ++ Q + +P+ E + +K +
Sbjct: 75 AALGFYTSGSFQTRMGDAIGISQASMSRCVANVTEALVERASQFIHFPADEASVQALKDE 134
Query: 160 FEKIQGLPNCCGVIDTTHILMCLPSSDPTNNLWLDHMKNHSMVLQAIVDPEMRFRDIVTG 219
F + G+P GV+D H+ + P+++ + +++ HS+ + D + T
Sbjct: 135 FYGLAGIPGVIGVVDCMHVAIKAPNAEDLS--YVNRKGLHSLNCLMVCDIRGALMTVETS 192
Query: 220 WPGKMEDRLIFRSSNFYKLCEEGKRLNGKILELSGGSEIREYIIGDSGYPFLPYLVTPYK 279
WPG ++D ++ + S+ + G +++GDS + +L+TP
Sbjct: 193 WPGSLQDCVVLQQSSLSS-------------QFEAGMHKESWLLGDSSFFLRTWLMTPL- 238
Query: 280 GQELPELGSE--FNRRHSASHLVAQRALARLKDKWKIIQG----VMWRPDKHKLPRIILV 333
+PE +E +N HSA+H V ++ L +++ + G + + P+K IIL
Sbjct: 239 --HIPETPAEYRYNMAHSATHSVIEKTFRTLCSRFRCLDGSKGALQYSPEKSS--HIILA 294
Query: 334 CCLLHNIVID 343
CC+LHNI ++
Sbjct: 295 CCVLHNISLE 304
>sp|Q5U538|HARB1_XENLA Putative nuclease HARBI1 OS=Xenopus laevis GN=harbi1 PE=2 SV=1
Length = 347
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 130/294 (44%), Gaps = 28/294 (9%)
Query: 54 DKFKSVFKISRRTFDYICSLVEEKMVVKTGGFSFTSGKHLSFRDQVAIALRRLSSGDSLM 113
D + + R DY+ L+ + T + +S Q+ AL +SG
Sbjct: 33 DYLVTTYGFPRPFIDYLVDLLGASLSRPTH-----RSRAISPETQIMAALGFYTSGSFQT 87
Query: 114 SIGDSCGLHHSTVSQVTWRFVEAMEQKGLQHLQWP-SETEMAEIKSKFEKIQGLPNCCGV 172
+GD+ G+ +++S+ EA+ ++ Q + +P E + +K +F + G+P GV
Sbjct: 88 RMGDTIGISQASMSRCVTNVTEALVERASQFISFPRDERSVQGLKDEFYNLAGVPGVLGV 147
Query: 173 IDTTHILMCLPSSDPTNNLWLDHMKNHSMVLQAIVDPEMRFRDIVTGWPGKMEDRLIFRS 232
+D T + + P+S+ + +++ HS+ + D T G M+D +
Sbjct: 148 VDCTQVNIKAPNSEDLS--YVNSRGLHSLNCLLVCDARGSLLWAETSRLGSMQDNAVLHQ 205
Query: 233 SNFYKLCEEGKRLNGKILELSGGSEIREYIIGDSGYPFLPYLVTPYKGQELPELGSEFNR 292
S L E G +++ D+ + P+L+TP + E P +N
Sbjct: 206 SELSGLFETKMHKQG-------------WLLADNAFILRPWLMTPVQIPESPS-DYRYNM 251
Query: 293 RHSASHLVAQRALARLKDKWKIIQG----VMWRPDKHKLPRIILVCCLLHNIVI 342
H+A+H V +R L+ +++ + G + + P+K +I+L CC+LHNI +
Sbjct: 252 AHTATHSVMERTQRSLRLRFRCLDGSRATLQYSPEKSA--QIVLACCILHNIAL 303
>sp|A1WQF4|NTPA_VEREI Non-canonical purine NTP pyrophosphatase OS=Verminephrobacter
eiseniae (strain EF01-2) GN=Veis_4156 PE=3 SV=1
Length = 199
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 264 GDSGYPFLPYLVTPYKGQELPELGSEFNRRHSASHLVAQRALARLKDKW 312
G +G+ F P L+ P G+ EL +E HS AQ+ LA L+++W
Sbjct: 150 GSNGFGFDPVLLLPGLGKTFAELPAEVKNAHSHRGRAAQQMLALLRERW 198
>sp|A1TT41|NTPA_ACIAC Non-canonical purine NTP pyrophosphatase OS=Acidovorax citrulli
(strain AAC00-1) GN=Aave_3578 PE=3 SV=1
Length = 199
Score = 35.0 bits (79), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 264 GDSGYPFLPYLVTPYKGQELPELGSEFNRRHSASHLVAQRALARLKDKW 312
GD G+ F P + P G+ EL E HS AQ+ LA ++++W
Sbjct: 150 GDGGFGFDPVMFIPEFGKTFAELPVEVKNAHSHRGRSAQQMLALMRERW 198
>sp|A7H1P3|MIAA_CAMJD tRNA dimethylallyltransferase OS=Campylobacter jejuni subsp. doylei
(strain ATCC BAA-1458 / RM4099 / 269.97) GN=miaA PE=3
SV=1
Length = 289
Score = 33.1 bits (74), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 235 FYKLCEEGKRLNGKILELSGGSEIREYIIGDSGYPFLPYLVTPYKGQELPELGSEFNRRH 294
FYK + K LN G E +EY+ G+ + L L+T + Q L + FN++
Sbjct: 214 FYKFDHKLKALNS-----IGLKECKEYLDGEISFKDLENLITIHTTQ-LAKRQRTFNKKF 267
Query: 295 SASHLVAQRALARLKDKWKI 314
+ L +ALA L+ K+ I
Sbjct: 268 QSKALEFDKALATLRMKFSI 287
>sp|A5DUL5|MDM34_LODEL Mitochondrial distribution and morphology protein 34
OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS
2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=MDM34
PE=3 SV=1
Length = 632
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 29/149 (19%)
Query: 183 PSSDPTNNLWLDHMKNHSMVLQAIVDPEMRFRDIVTGWPGKMEDRLIFRSSNFYKLCEEG 242
P++ T + H + L+ DPE+ ++ L RSS + L +E
Sbjct: 457 PATKTTPQTQIHHPTPRKLELRVQADPELH---------SEVSTDLHSRSSAHHALYQEF 507
Query: 243 KR------LNGKILELSGGSEIREYIIGDSGY-PFLP---YLVTPYKGQELPELGSEFNR 292
R L K+L GG + G++GY F+P +P K L E N
Sbjct: 508 IRSTQSPSLYDKVLTTCGGVGL-----GNTGYFSFVPQRALSASPIKA-----LNEELNE 557
Query: 293 RHSASHLVAQRALARLKDKWKIIQGVMWR 321
+ S +H+ R RL++K K G M R
Sbjct: 558 KKSMNHMDFNRVSQRLEEKLKQNNGDMLR 586
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,647,695
Number of Sequences: 539616
Number of extensions: 6473156
Number of successful extensions: 14463
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14436
Number of HSP's gapped (non-prelim): 11
length of query: 391
length of database: 191,569,459
effective HSP length: 119
effective length of query: 272
effective length of database: 127,355,155
effective search space: 34640602160
effective search space used: 34640602160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)