Query 016338
Match_columns 391
No_of_seqs 367 out of 1094
Neff 10.9
Searched_HMMs 46136
Date Fri Mar 29 05:57:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016338.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016338hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1E-42 2.2E-47 305.2 36.8 357 3-390 34-391 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 5.9E-44 1.3E-48 308.4 27.0 378 1-387 48-436 (448)
3 KOG2532 Permease of the major 100.0 4.9E-42 1.1E-46 313.8 33.2 381 9-389 65-451 (466)
4 PRK03545 putative arabinose tr 100.0 6.2E-41 1.3E-45 307.6 38.3 354 3-388 30-383 (390)
5 TIGR00903 2A0129 major facilit 100.0 9.6E-41 2.1E-45 301.5 37.3 353 1-383 10-363 (368)
6 PRK09556 uhpT sugar phosphate 100.0 2E-41 4.3E-46 317.6 32.2 375 2-385 49-449 (467)
7 TIGR00893 2A0114 d-galactonate 100.0 2.8E-40 6E-45 304.2 37.3 378 2-383 14-397 (399)
8 TIGR00894 2A0114euk Na(+)-depe 100.0 1.9E-40 4E-45 311.4 35.3 378 11-388 70-453 (465)
9 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.7E-40 3.6E-45 306.0 33.7 363 2-375 28-411 (412)
10 PRK11663 regulatory protein Uh 100.0 3.3E-40 7.1E-45 306.4 35.4 376 2-388 43-427 (434)
11 PRK09705 cynX putative cyanate 100.0 1.4E-39 3.1E-44 298.3 36.5 354 1-388 28-384 (393)
12 PRK11551 putative 3-hydroxyphe 100.0 3.5E-38 7.5E-43 291.3 34.9 358 2-385 35-396 (406)
13 PRK10091 MFS transport protein 100.0 5.3E-38 1.1E-42 287.2 35.4 356 2-390 23-381 (382)
14 PRK10213 nepI ribonucleoside t 100.0 1.7E-37 3.6E-42 284.3 38.6 345 3-379 41-385 (394)
15 TIGR00890 2A0111 Oxalate/Forma 100.0 3.5E-38 7.7E-43 288.3 33.9 350 2-378 23-375 (377)
16 PRK11273 glpT sn-glycerol-3-ph 100.0 2.3E-37 5.1E-42 288.8 36.8 380 2-389 49-439 (452)
17 PRK03699 putative transporter; 100.0 1.9E-37 4.1E-42 284.7 34.9 354 2-386 27-381 (394)
18 PLN00028 nitrate transmembrane 100.0 5.9E-37 1.3E-41 287.1 36.2 370 2-386 56-434 (476)
19 TIGR00881 2A0104 phosphoglycer 100.0 3.7E-38 8.1E-43 288.4 27.2 356 2-366 15-378 (379)
20 COG2223 NarK Nitrate/nitrite t 100.0 1.1E-37 2.3E-42 270.3 27.9 360 2-388 34-404 (417)
21 PRK10406 alpha-ketoglutarate t 100.0 1.2E-36 2.6E-41 282.5 35.8 357 2-388 42-427 (432)
22 PRK14995 methyl viologen resis 100.0 9E-37 2E-41 287.7 34.9 345 2-358 26-412 (495)
23 TIGR00899 2A0120 sugar efflux 100.0 1.9E-36 4.1E-41 276.8 35.7 352 3-384 18-373 (375)
24 TIGR00897 2A0118 polyol permea 100.0 7.5E-36 1.6E-40 274.7 38.3 359 4-385 35-401 (402)
25 PRK10642 proline/glycine betai 100.0 5.8E-36 1.3E-40 282.0 37.9 368 2-386 36-431 (490)
26 PRK15402 multidrug efflux syst 100.0 2.1E-35 4.6E-40 272.5 40.2 340 2-366 33-377 (406)
27 TIGR00900 2A0121 H+ Antiporter 100.0 4.3E-36 9.3E-41 273.3 34.6 338 3-361 20-365 (365)
28 TIGR00712 glpT glycerol-3-phos 100.0 2.2E-36 4.7E-41 281.4 32.5 377 4-390 49-438 (438)
29 TIGR00710 efflux_Bcr_CflA drug 100.0 2.2E-35 4.8E-40 270.8 38.5 332 2-359 25-361 (385)
30 TIGR00892 2A0113 monocarboxyla 100.0 2E-36 4.2E-41 282.2 31.9 368 2-380 39-416 (455)
31 PRK12307 putative sialic acid 100.0 7.7E-36 1.7E-40 277.4 35.8 346 2-366 38-389 (426)
32 TIGR00891 2A0112 putative sial 100.0 2.2E-36 4.7E-41 279.3 31.8 356 2-369 32-400 (405)
33 PRK11102 bicyclomycin/multidru 100.0 6.4E-35 1.4E-39 266.9 39.9 361 2-389 11-376 (377)
34 PRK15034 nitrate/nitrite trans 100.0 1.8E-35 3.9E-40 268.8 34.7 354 2-388 54-457 (462)
35 TIGR01299 synapt_SV2 synaptic 100.0 1.5E-35 3.2E-40 284.7 35.3 370 2-385 187-734 (742)
36 PRK15403 multidrug efflux syst 100.0 1.6E-34 3.5E-39 266.1 38.7 350 2-373 36-385 (413)
37 PF07690 MFS_1: Major Facilita 100.0 1.8E-36 3.8E-41 274.6 25.1 332 2-350 16-352 (352)
38 TIGR00711 efflux_EmrB drug res 100.0 1.9E-35 4.1E-40 279.5 32.7 347 2-359 22-410 (485)
39 PRK05122 major facilitator sup 100.0 1E-34 2.3E-39 267.4 35.5 351 3-390 36-394 (399)
40 PRK03633 putative MFS family t 100.0 2E-34 4.3E-39 263.6 36.5 347 2-386 26-373 (381)
41 PRK09952 shikimate transporter 100.0 2E-34 4.3E-39 267.8 36.9 358 8-389 49-437 (438)
42 PRK10504 putative transporter; 100.0 3.2E-34 6.9E-39 269.8 37.9 348 2-361 30-417 (471)
43 PRK10133 L-fucose transporter; 100.0 2.5E-34 5.4E-39 266.2 36.1 356 2-382 46-430 (438)
44 PRK11646 multidrug resistance 100.0 2.2E-34 4.8E-39 264.3 35.0 351 7-388 36-391 (400)
45 PRK10077 xylE D-xylose transpo 100.0 1.7E-34 3.7E-39 272.4 35.0 373 2-386 32-458 (479)
46 PRK11043 putative transporter; 100.0 7.2E-34 1.6E-38 262.0 37.8 335 2-366 26-363 (401)
47 TIGR00896 CynX cyanate transpo 100.0 2.3E-34 5E-39 260.9 32.7 331 1-364 19-353 (355)
48 PRK12382 putative transporter; 100.0 5.1E-34 1.1E-38 262.2 35.3 347 3-386 36-390 (392)
49 PRK10489 enterobactin exporter 100.0 2.6E-34 5.6E-39 266.2 33.4 357 2-383 37-398 (417)
50 TIGR00898 2A0119 cation transp 100.0 2.1E-34 4.5E-39 273.5 32.2 362 3-386 110-496 (505)
51 TIGR00886 2A0108 nitrite extru 100.0 1.3E-34 2.7E-39 263.9 29.2 330 2-345 21-365 (366)
52 PRK09874 drug efflux system pr 100.0 6.9E-34 1.5E-38 262.9 34.4 356 2-386 34-399 (408)
53 PRK10473 multidrug efflux syst 100.0 1.8E-33 3.9E-38 258.5 36.9 336 3-372 24-361 (392)
54 TIGR00879 SP MFS transporter, 100.0 1.2E-34 2.7E-39 273.4 29.8 373 2-386 48-471 (481)
55 PRK15075 citrate-proton sympor 100.0 5.6E-34 1.2E-38 264.8 33.6 333 2-361 35-396 (434)
56 PRK11652 emrD multidrug resist 100.0 4.8E-33 1E-37 255.9 39.0 332 2-360 28-361 (394)
57 PRK11195 lysophospholipid tran 100.0 7.7E-34 1.7E-38 260.1 33.5 354 4-385 25-380 (393)
58 PRK15011 sugar efflux transpor 100.0 4.3E-33 9.4E-38 255.7 37.6 350 3-385 36-391 (393)
59 TIGR00902 2A0127 phenyl propri 100.0 4.2E-33 9.2E-38 254.7 36.4 345 3-380 25-374 (382)
60 TIGR00885 fucP L-fucose:H+ sym 100.0 4.7E-33 1E-37 255.5 35.7 347 2-377 23-404 (410)
61 PRK03893 putative sialic acid 100.0 9.1E-34 2E-38 268.6 31.2 360 2-376 40-444 (496)
62 cd06174 MFS The Major Facilita 100.0 4.9E-33 1.1E-37 251.8 34.4 330 2-383 19-350 (352)
63 TIGR00887 2A0109 phosphate:H+ 100.0 4.1E-33 8.9E-38 263.6 33.6 369 3-384 37-488 (502)
64 PRK11128 putative 3-phenylprop 100.0 2E-32 4.4E-37 250.4 35.9 346 2-380 24-374 (382)
65 PRK10054 putative transporter; 100.0 5.5E-33 1.2E-37 254.6 32.0 346 6-382 32-381 (395)
66 TIGR00895 2A0115 benzoate tran 100.0 1.9E-33 4.1E-38 259.0 28.3 343 2-356 37-397 (398)
67 KOG2504 Monocarboxylate transp 100.0 7.8E-33 1.7E-37 256.4 27.9 373 2-385 66-476 (509)
68 PRK11010 ampG muropeptide tran 100.0 2.9E-31 6.4E-36 249.1 38.6 358 3-386 33-404 (491)
69 TIGR00883 2A0106 metabolite-pr 100.0 3.3E-32 7.1E-37 250.4 30.9 347 3-374 14-390 (394)
70 COG2807 CynX Cyanate permease 100.0 3.4E-31 7.4E-36 224.9 32.4 355 1-388 31-388 (395)
71 KOG1330 Sugar transporter/spin 100.0 6.3E-34 1.4E-38 248.7 13.9 353 4-364 55-417 (493)
72 PRK09528 lacY galactoside perm 100.0 1.7E-31 3.6E-36 247.5 28.7 360 7-388 36-406 (420)
73 KOG2533 Permease of the major 100.0 9E-32 1.9E-36 246.8 26.3 350 8-367 72-438 (495)
74 PRK11902 ampG muropeptide tran 100.0 9.6E-30 2.1E-34 234.3 39.5 356 3-387 20-392 (402)
75 TIGR00882 2A0105 oligosacchari 100.0 3.9E-30 8.5E-35 236.6 32.7 358 3-382 23-392 (396)
76 TIGR00889 2A0110 nucleoside tr 100.0 5.7E-30 1.2E-34 236.0 33.7 355 2-388 23-405 (418)
77 TIGR00901 2A0125 AmpG-related 100.0 6.1E-30 1.3E-34 232.1 32.5 317 2-343 8-355 (356)
78 COG0738 FucP Fucose permease [ 100.0 1.2E-29 2.5E-34 218.9 31.6 356 2-385 33-409 (422)
79 KOG3764 Vesicular amine transp 100.0 3.2E-31 7E-36 226.9 20.4 349 10-386 99-455 (464)
80 PRK06814 acylglycerophosphoeth 100.0 8.4E-30 1.8E-34 263.7 32.3 340 17-378 52-415 (1140)
81 PF05977 MFS_3: Transmembrane 100.0 1.3E-28 2.8E-33 229.5 34.7 359 4-385 32-394 (524)
82 TIGR00805 oat sodium-independe 100.0 1.9E-30 4.2E-35 248.8 22.1 265 2-266 53-397 (633)
83 PRK08633 2-acyl-glycerophospho 100.0 3.5E-29 7.5E-34 259.9 33.1 354 5-375 33-400 (1146)
84 KOG0569 Permease of the major 100.0 3.2E-28 7E-33 220.4 33.5 356 19-387 62-456 (485)
85 TIGR00924 yjdL_sub1_fam amino 100.0 2.8E-28 6E-33 227.9 33.7 379 4-387 32-470 (475)
86 TIGR02718 sider_RhtX_FptX side 100.0 1.7E-27 3.8E-32 218.6 37.4 350 3-380 22-386 (390)
87 KOG2615 Permease of the major 100.0 2.4E-29 5.1E-34 214.2 21.8 351 15-377 66-432 (451)
88 TIGR00792 gph sugar (Glycoside 100.0 4.1E-28 8.9E-33 226.4 30.4 333 4-361 22-382 (437)
89 PRK10207 dipeptide/tripeptide 100.0 7.1E-27 1.5E-31 218.5 31.8 371 4-383 37-474 (489)
90 KOG0253 Synaptic vesicle trans 100.0 4.7E-27 1E-31 199.0 24.7 368 3-387 99-521 (528)
91 TIGR00806 rfc RFC reduced fola 100.0 5.8E-26 1.3E-30 202.9 29.0 367 2-379 46-442 (511)
92 KOG0254 Predicted transporter 99.9 9.5E-26 2.1E-30 213.5 26.6 348 17-379 89-476 (513)
93 PF06609 TRI12: Fungal trichot 99.9 5.4E-25 1.2E-29 204.6 30.3 344 3-358 65-466 (599)
94 PF03825 Nuc_H_symport: Nucleo 99.9 5.8E-24 1.3E-28 192.9 35.3 361 3-390 23-400 (400)
95 PTZ00207 hypothetical protein; 99.9 1.1E-24 2.4E-29 203.8 31.5 384 2-389 47-556 (591)
96 KOG0255 Synaptic vesicle trans 99.9 1.9E-24 4.2E-29 205.7 33.8 330 10-358 111-467 (521)
97 TIGR01301 GPH_sucrose GPH fami 99.9 6E-23 1.3E-27 188.4 33.9 370 3-388 25-474 (477)
98 PF11700 ATG22: Vacuole efflux 99.9 2.8E-22 6.1E-27 185.2 36.7 357 17-388 70-471 (477)
99 KOG0252 Inorganic phosphate tr 99.9 4.2E-25 9.1E-30 192.9 16.2 361 14-386 81-499 (538)
100 PRK09584 tppB putative tripept 99.9 3.2E-23 6.9E-28 195.0 30.3 371 5-383 45-477 (500)
101 PF01306 LacY_symp: LacY proto 99.9 2.6E-23 5.5E-28 185.1 27.8 363 4-388 29-403 (412)
102 TIGR01272 gluP glucose/galacto 99.9 2.2E-23 4.8E-28 184.0 27.4 278 69-373 7-303 (310)
103 PRK09669 putative symporter Ya 99.9 1.1E-22 2.4E-27 189.7 33.0 331 5-361 33-390 (444)
104 PF00083 Sugar_tr: Sugar (and 99.9 4.7E-30 1E-34 240.4 -18.2 354 17-386 46-437 (451)
105 KOG4686 Predicted sugar transp 99.9 4.6E-25 9.9E-30 180.6 9.3 362 4-388 66-446 (459)
106 TIGR00788 fbt folate/biopterin 99.9 9.2E-23 2E-27 190.3 23.3 343 3-361 47-415 (468)
107 PRK09848 glucuronide transport 99.9 6.4E-21 1.4E-25 178.2 32.9 331 5-361 32-390 (448)
108 PRK15462 dipeptide/tripeptide 99.9 1.3E-20 2.9E-25 173.8 33.0 367 5-377 32-469 (493)
109 PF13347 MFS_2: MFS/sugar tran 99.9 9.6E-22 2.1E-26 182.6 25.6 333 4-361 24-386 (428)
110 PRK10429 melibiose:sodium symp 99.9 8.1E-21 1.8E-25 178.4 30.4 336 5-361 30-395 (473)
111 COG2270 Permeases of the major 99.9 2.7E-20 5.8E-25 162.4 26.6 354 17-388 58-432 (438)
112 PRK11462 putative transporter; 99.9 5.6E-18 1.2E-22 158.1 36.6 329 5-361 33-389 (460)
113 PF03209 PUCC: PUCC protein; 99.9 9.1E-18 2E-22 147.1 33.0 360 7-388 5-401 (403)
114 KOG2563 Permease of the major 99.8 8.1E-19 1.8E-23 154.0 24.4 363 3-385 66-450 (480)
115 COG2211 MelB Na+/melibiose sym 99.8 1.2E-17 2.6E-22 150.5 31.4 333 8-361 39-398 (467)
116 PF03137 OATP: Organic Anion T 99.8 2.2E-22 4.8E-27 188.5 -0.5 356 2-360 23-515 (539)
117 KOG3626 Organic anion transpor 99.8 6.7E-19 1.5E-23 165.1 20.0 265 2-266 117-459 (735)
118 COG3104 PTR2 Dipeptide/tripept 99.8 5.5E-17 1.2E-21 145.0 27.4 379 5-384 45-486 (498)
119 KOG2325 Predicted transporter/ 99.7 1.8E-16 4E-21 143.2 19.4 362 11-387 65-477 (488)
120 KOG2816 Predicted transporter 99.7 2.5E-16 5.4E-21 144.3 20.4 316 27-359 72-392 (463)
121 PF03092 BT1: BT1 family; Int 99.7 3.1E-15 6.7E-20 138.0 21.5 376 3-388 11-416 (433)
122 TIGR00880 2_A_01_02 Multidrug 99.7 2.1E-16 4.6E-21 123.0 11.5 137 23-161 4-140 (141)
123 PF05631 DUF791: Protein of un 99.7 6.9E-14 1.5E-18 121.0 26.4 239 5-262 57-304 (354)
124 TIGR00889 2A0110 nucleoside tr 99.6 7.2E-15 1.6E-19 135.8 17.7 158 6-163 232-406 (418)
125 PRK05122 major facilitator sup 99.6 4.2E-14 9.1E-19 130.4 16.5 155 5-163 239-393 (399)
126 PRK10642 proline/glycine betai 99.6 1.7E-13 3.7E-18 129.5 19.7 161 5-166 273-436 (490)
127 PRK10489 enterobactin exporter 99.6 6.4E-14 1.4E-18 130.0 15.6 161 4-166 245-406 (417)
128 PRK09528 lacY galactoside perm 99.6 4.5E-14 9.9E-19 131.0 14.2 149 13-163 258-407 (420)
129 PRK10054 putative transporter; 99.6 2.7E-13 5.8E-18 124.6 18.3 173 199-382 6-179 (395)
130 TIGR00890 2A0111 Oxalate/Forma 99.5 9.7E-14 2.1E-18 126.8 14.5 147 5-151 228-374 (377)
131 PRK03893 putative sialic acid 99.5 1.1E-13 2.5E-18 131.4 14.5 146 4-149 297-443 (496)
132 PRK15011 sugar efflux transpor 99.5 3.8E-13 8.3E-18 123.7 17.2 151 5-158 239-390 (393)
133 cd06174 MFS The Major Facilita 99.5 3.1E-13 6.6E-18 122.2 16.1 151 4-156 197-349 (352)
134 TIGR01299 synapt_SV2 synaptic 99.5 2.9E-13 6.2E-18 131.4 16.6 141 19-163 597-737 (742)
135 PRK09874 drug efflux system pr 99.5 2.6E-13 5.6E-18 125.6 15.0 155 5-161 242-400 (408)
136 PRK12382 putative transporter; 99.5 4.8E-13 1E-17 123.1 16.5 151 5-159 239-389 (392)
137 PRK11551 putative 3-hydroxyphe 99.5 4.9E-13 1.1E-17 123.7 16.5 151 5-157 243-394 (406)
138 PRK09556 uhpT sugar phosphate 99.5 3.2E-13 7E-18 127.0 15.3 152 5-156 281-446 (467)
139 PRK11663 regulatory protein Uh 99.5 5.2E-13 1.1E-17 124.4 16.4 169 201-380 24-193 (434)
140 TIGR00924 yjdL_sub1_fam amino 99.5 1.6E-12 3.5E-17 122.0 19.2 175 201-385 11-192 (475)
141 PRK03633 putative MFS family t 99.5 1.2E-12 2.7E-17 119.8 18.1 149 4-157 222-370 (381)
142 PF01770 Folate_carrier: Reduc 99.5 1E-10 2.2E-15 104.4 28.9 334 5-349 27-392 (412)
143 PRK09584 tppB putative tripept 99.5 3.7E-12 7.9E-17 120.3 20.8 178 194-381 14-197 (500)
144 PRK15462 dipeptide/tripeptide 99.5 1.9E-12 4.1E-17 120.0 18.4 175 200-384 9-188 (493)
145 PRK11646 multidrug resistance 99.5 2.5E-12 5.5E-17 118.4 19.1 170 203-383 13-183 (400)
146 TIGR00892 2A0113 monocarboxyla 99.5 1.6E-13 3.4E-18 128.5 11.1 147 5-153 264-415 (455)
147 PRK03545 putative arabinose tr 99.5 1.6E-12 3.5E-17 119.5 17.5 152 6-160 230-381 (390)
148 TIGR00899 2A0120 sugar efflux 99.5 1.7E-12 3.7E-17 118.6 17.3 147 8-157 226-372 (375)
149 COG2271 UhpC Sugar phosphate p 99.5 5.3E-13 1.1E-17 117.0 12.5 179 200-389 29-210 (448)
150 TIGR00879 SP MFS transporter, 99.5 9.5E-13 2.1E-17 124.3 15.2 160 4-163 306-474 (481)
151 TIGR00902 2A0127 phenyl propri 99.5 2.4E-12 5.1E-17 118.0 17.0 147 4-154 227-374 (382)
152 PRK10504 putative transporter; 99.5 5.5E-12 1.2E-16 119.0 19.3 174 200-384 10-184 (471)
153 PRK10077 xylE D-xylose transpo 99.5 1.6E-12 3.4E-17 123.0 15.4 160 5-164 294-462 (479)
154 TIGR00900 2A0121 H+ Antiporter 99.4 4.7E-12 1E-16 115.2 17.3 170 204-384 3-178 (365)
155 PRK09705 cynX putative cyanate 99.4 6.4E-12 1.4E-16 115.5 17.6 158 5-165 228-387 (393)
156 PRK10091 MFS transport protein 99.4 1.1E-11 2.4E-16 113.6 18.3 171 200-381 3-174 (382)
157 PF07690 MFS_1: Major Facilita 99.4 9.1E-12 2E-16 112.7 17.7 165 206-380 2-167 (352)
158 TIGR00710 efflux_Bcr_CflA drug 99.4 6.9E-12 1.5E-16 115.1 17.0 168 206-384 11-179 (385)
159 PRK11010 ampG muropeptide tran 99.4 8.9E-11 1.9E-15 110.8 24.1 153 6-158 247-402 (491)
160 PRK10213 nepI ribonucleoside t 99.4 3E-11 6.4E-16 111.1 20.4 156 215-381 35-191 (394)
161 PRK10207 dipeptide/tripeptide 99.4 2E-11 4.2E-16 114.8 19.2 175 200-384 14-193 (489)
162 TIGR02332 HpaX 4-hydroxyphenyl 99.4 2.9E-11 6.2E-16 111.9 19.5 169 205-384 13-188 (412)
163 PRK03699 putative transporter; 99.4 4.4E-11 9.6E-16 110.1 20.4 173 201-383 8-181 (394)
164 TIGR00711 efflux_EmrB drug res 99.4 2.2E-11 4.9E-16 115.3 17.9 171 203-384 5-176 (485)
165 COG2814 AraJ Arabinose efflux 99.4 4.9E-11 1.1E-15 105.9 18.2 176 200-386 13-189 (394)
166 PLN00028 nitrate transmembrane 99.4 4.7E-11 1E-15 112.4 19.0 163 211-385 47-219 (476)
167 TIGR00883 2A0106 metabolite-pr 99.4 8.8E-12 1.9E-16 114.6 13.8 145 5-149 242-391 (394)
168 PRK11043 putative transporter; 99.4 5.5E-11 1.2E-15 109.8 19.1 172 205-386 8-182 (401)
169 PRK10473 multidrug efflux syst 99.4 6.3E-11 1.4E-15 109.0 19.2 168 205-383 8-176 (392)
170 PRK14995 methyl viologen resis 99.4 9.6E-11 2.1E-15 111.0 20.4 173 202-385 8-182 (495)
171 TIGR00895 2A0115 benzoate tran 99.4 1.9E-11 4.2E-16 112.5 15.4 162 209-381 26-188 (398)
172 PF05977 MFS_3: Transmembrane 99.4 3.5E-11 7.6E-16 113.0 17.1 151 4-156 240-391 (524)
173 TIGR00903 2A0129 major facilit 99.4 6.3E-11 1.4E-15 107.5 17.9 163 213-386 4-166 (368)
174 TIGR00886 2A0108 nitrite extru 99.3 6.9E-11 1.5E-15 107.7 18.1 148 201-358 2-151 (366)
175 TIGR00891 2A0112 putative sial 99.3 1.1E-10 2.3E-15 107.9 19.3 170 202-381 14-185 (405)
176 PRK15034 nitrate/nitrite trans 99.3 5.3E-11 1.2E-15 109.3 16.8 178 199-386 33-233 (462)
177 PRK11273 glpT sn-glycerol-3-ph 99.3 2.9E-11 6.3E-16 113.3 15.2 155 4-158 275-434 (452)
178 PRK11128 putative 3-phenylprop 99.3 7.9E-11 1.7E-15 108.0 17.0 145 5-153 228-373 (382)
179 TIGR00893 2A0114 d-galactonate 99.3 3.5E-11 7.5E-16 110.6 14.7 159 215-384 9-168 (399)
180 TIGR00897 2A0118 polyol permea 99.3 2.2E-10 4.7E-15 105.8 19.8 162 199-371 12-179 (402)
181 PRK09952 shikimate transporter 99.3 1.4E-10 3E-15 108.2 18.2 153 8-161 277-434 (438)
182 PRK11102 bicyclomycin/multidru 99.3 7.5E-11 1.6E-15 107.9 16.1 157 216-383 7-164 (377)
183 TIGR00769 AAA ADP/ATP carrier 99.3 4E-08 8.7E-13 90.6 33.3 254 6-265 27-332 (472)
184 PRK15402 multidrug efflux syst 99.3 1.6E-10 3.6E-15 106.8 18.1 158 215-383 28-186 (406)
185 TIGR00712 glpT glycerol-3-phos 99.3 9.3E-11 2E-15 109.5 16.5 174 199-383 26-204 (438)
186 PRK11195 lysophospholipid tran 99.3 1.2E-10 2.6E-15 107.0 16.9 171 199-384 2-173 (393)
187 PRK11652 emrD multidrug resist 99.3 2.1E-10 4.5E-15 105.7 18.5 166 205-381 13-179 (394)
188 TIGR00882 2A0105 oligosacchari 99.3 1.3E-10 2.9E-15 107.0 17.0 173 199-383 1-181 (396)
189 KOG3762 Predicted transporter 99.3 2.5E-10 5.3E-15 103.1 17.5 181 194-385 365-547 (618)
190 KOG3098 Uncharacterized conser 99.3 6.3E-09 1.4E-13 94.6 26.3 314 23-356 56-411 (461)
191 PF06813 Nodulin-like: Nodulin 99.3 1.6E-09 3.4E-14 91.2 20.6 159 2-163 22-185 (250)
192 TIGR02718 sider_RhtX_FptX side 99.3 2.4E-10 5.2E-15 105.1 16.9 150 5-154 231-386 (390)
193 PRK15403 multidrug efflux syst 99.3 4.4E-10 9.5E-15 104.0 18.7 155 218-383 34-189 (413)
194 PRK15075 citrate-proton sympor 99.3 1.9E-10 4.1E-15 107.3 16.4 134 5-138 261-398 (434)
195 PRK12307 putative sialic acid 99.3 2.9E-10 6.2E-15 105.9 17.6 162 202-374 20-182 (426)
196 PF11700 ATG22: Vacuole efflux 99.3 3E-10 6.4E-15 105.7 17.2 152 7-158 307-467 (477)
197 TIGR00881 2A0104 phosphoglycer 99.3 5E-11 1.1E-15 108.9 12.0 165 209-384 4-170 (379)
198 TIGR00926 2A1704 Peptide:H+ sy 99.2 2.9E-08 6.3E-13 95.7 28.7 155 4-158 10-181 (654)
199 TIGR00887 2A0109 phosphate:H+ 99.2 3E-10 6.4E-15 108.0 15.0 159 5-164 311-493 (502)
200 TIGR00806 rfc RFC reduced fola 99.2 1.3E-09 2.9E-14 98.7 17.5 160 219-389 44-207 (511)
201 PRK10406 alpha-ketoglutarate t 99.2 1E-09 2.3E-14 102.2 17.5 152 5-157 266-422 (432)
202 TIGR00885 fucP L-fucose:H+ sym 99.2 3E-09 6.5E-14 98.2 20.2 170 202-381 5-203 (410)
203 PRK10133 L-fucose transporter; 99.2 3.9E-09 8.5E-14 98.3 20.8 147 201-357 27-177 (438)
204 TIGR00792 gph sugar (Glycoside 99.2 2.8E-10 6.1E-15 106.3 12.8 123 15-138 255-384 (437)
205 TIGR00896 CynX cyanate transpo 99.2 9.6E-10 2.1E-14 99.8 15.5 149 219-378 19-168 (355)
206 COG2270 Permeases of the major 99.2 6.5E-10 1.4E-14 98.0 13.6 145 9-155 280-425 (438)
207 PF06963 FPN1: Ferroportin1 (F 99.2 4.6E-08 9.9E-13 89.1 25.9 328 19-353 40-412 (432)
208 PRK11902 ampG muropeptide tran 99.2 3E-09 6.5E-14 98.2 18.7 168 206-384 5-181 (402)
209 TIGR00880 2_A_01_02 Multidrug 99.2 7.3E-10 1.6E-14 85.8 12.1 135 242-386 4-139 (141)
210 COG2223 NarK Nitrate/nitrite t 99.1 2.9E-09 6.4E-14 93.9 15.9 176 200-386 14-194 (417)
211 TIGR00898 2A0119 cation transp 99.1 1.7E-09 3.6E-14 103.1 15.6 140 21-163 359-498 (505)
212 PRK06814 acylglycerophosphoeth 99.1 5.5E-09 1.2E-13 109.3 19.8 183 194-385 5-195 (1140)
213 PF01306 LacY_symp: LacY proto 99.1 2.5E-09 5.4E-14 96.2 14.3 149 15-165 257-406 (412)
214 PF02487 CLN3: CLN3 protein; 99.1 1.4E-07 3.1E-12 84.4 25.1 318 20-356 62-394 (402)
215 COG3104 PTR2 Dipeptide/tripept 99.1 3.6E-09 7.8E-14 95.5 14.3 184 195-387 15-208 (498)
216 KOG2504 Monocarboxylate transp 99.1 1.4E-09 3.1E-14 101.8 12.0 155 3-159 319-476 (509)
217 KOG0569 Permease of the major 99.1 9.6E-09 2.1E-13 94.3 17.0 161 6-167 294-462 (485)
218 KOG1330 Sugar transporter/spin 99.1 1.1E-10 2.5E-15 103.6 4.2 177 203-389 36-213 (493)
219 PRK09848 glucuronide transport 99.1 3E-09 6.5E-14 99.7 13.9 128 10-137 257-391 (448)
220 TIGR01301 GPH_sucrose GPH fami 99.1 8.6E-09 1.9E-13 95.5 16.4 179 201-388 5-221 (477)
221 TIGR01272 gluP glucose/galacto 99.0 6E-09 1.3E-13 92.3 14.7 129 12-145 173-301 (310)
222 KOG3764 Vesicular amine transp 99.0 9.5E-10 2.1E-14 95.9 9.2 147 231-387 101-249 (464)
223 TIGR00901 2A0125 AmpG-related 99.0 1.2E-08 2.5E-13 92.7 16.7 161 218-384 6-177 (356)
224 PF03825 Nuc_H_symport: Nucleo 99.0 1.4E-08 3.1E-13 92.6 17.0 155 6-161 231-397 (400)
225 PTZ00207 hypothetical protein; 99.0 3.1E-08 6.7E-13 93.9 18.9 159 215-386 42-206 (591)
226 TIGR00894 2A0114euk Na(+)-depe 99.0 5E-09 1.1E-13 98.8 13.5 146 230-385 70-219 (465)
227 KOG0637 Sucrose transporter an 99.0 2.2E-09 4.7E-14 95.4 10.0 360 4-373 54-484 (498)
228 PRK08633 2-acyl-glycerophospho 99.0 1.9E-08 4.1E-13 105.5 18.7 156 195-359 4-165 (1146)
229 COG0477 ProP Permeases of the 99.0 1.8E-08 3.8E-13 89.2 15.8 148 4-151 24-177 (338)
230 TIGR00788 fbt folate/biopterin 99.0 7.4E-09 1.6E-13 97.1 13.2 127 10-136 281-415 (468)
231 KOG4332 Predicted sugar transp 99.0 4.4E-08 9.5E-13 81.0 15.6 346 8-380 63-426 (454)
232 PF06609 TRI12: Fungal trichot 99.0 7E-08 1.5E-12 91.1 19.1 174 198-384 38-216 (599)
233 TIGR00805 oat sodium-independe 99.0 5E-09 1.1E-13 101.5 11.6 160 217-385 49-281 (633)
234 COG2807 CynX Cyanate permease 98.9 4.3E-08 9.2E-13 84.9 14.7 154 5-161 231-387 (395)
235 KOG3810 Micronutrient transpor 98.9 8.4E-08 1.8E-12 82.2 15.1 364 11-388 35-424 (433)
236 KOG4686 Predicted sugar transp 98.9 2.6E-08 5.6E-13 83.1 11.3 143 7-153 290-437 (459)
237 KOG2615 Permease of the major 98.9 1.9E-08 4.2E-13 87.4 10.5 132 233-374 65-200 (451)
238 KOG3762 Predicted transporter 98.8 1.6E-08 3.4E-13 91.7 9.1 146 9-156 398-544 (618)
239 PRK09669 putative symporter Ya 98.8 6.6E-08 1.4E-12 90.5 13.5 173 206-382 15-201 (444)
240 PRK11462 putative transporter; 98.8 2.1E-07 4.7E-12 87.2 16.5 174 205-383 14-202 (460)
241 PRK10429 melibiose:sodium symp 98.8 1.9E-07 4E-12 88.2 15.1 170 205-382 11-198 (473)
242 COG0738 FucP Fucose permease [ 98.8 1.3E-06 2.8E-11 77.0 18.5 165 212-385 24-210 (422)
243 KOG3574 Acetyl-CoA transporter 98.7 3.6E-06 7.9E-11 73.4 20.1 338 4-360 52-432 (510)
244 KOG0253 Synaptic vesicle trans 98.7 5.1E-08 1.1E-12 84.4 7.9 131 27-163 391-523 (528)
245 PF06779 DUF1228: Protein of u 98.7 7.8E-08 1.7E-12 65.5 6.8 73 1-75 11-83 (85)
246 PF13347 MFS_2: MFS/sugar tran 98.7 1.1E-07 2.3E-12 88.7 10.1 171 209-387 10-200 (428)
247 COG2211 MelB Na+/melibiose sym 98.7 8.1E-07 1.7E-11 81.1 14.5 125 13-137 268-399 (467)
248 KOG2532 Permease of the major 98.6 5E-07 1.1E-11 83.9 13.3 150 229-388 66-219 (466)
249 PF03219 TLC: TLC ATP/ADP tran 98.6 0.0004 8.7E-09 64.9 29.7 247 15-266 56-349 (491)
250 PF05978 UNC-93: Ion channel r 98.5 2.2E-06 4.8E-11 66.7 12.3 108 21-131 41-148 (156)
251 KOG0254 Predicted transporter 98.5 6E-06 1.3E-10 78.8 17.5 136 237-383 90-228 (513)
252 PF06813 Nodulin-like: Nodulin 98.5 5.5E-06 1.2E-10 69.9 14.5 160 215-386 17-183 (250)
253 PF13000 Acatn: Acetyl-coenzym 98.5 0.00014 3.1E-09 66.3 23.0 349 4-359 22-467 (544)
254 KOG2533 Permease of the major 98.4 2.6E-06 5.6E-11 79.4 12.1 146 229-384 74-226 (495)
255 PF03209 PUCC: PUCC protein; 98.4 1.8E-05 4E-10 70.5 16.2 148 9-156 236-395 (403)
256 KOG0255 Synaptic vesicle trans 98.3 7.3E-06 1.6E-10 78.5 13.1 140 231-383 113-253 (521)
257 KOG1237 H+/oligopeptide sympor 98.3 0.00014 3E-09 69.3 21.0 154 3-156 59-242 (571)
258 PF00854 PTR2: POT family; In 98.3 1.3E-05 2.7E-10 73.3 13.3 111 48-158 2-122 (372)
259 PF12832 MFS_1_like: MFS_1 lik 98.3 1E-05 2.3E-10 54.7 8.6 62 204-266 4-65 (77)
260 PF12832 MFS_1_like: MFS_1 lik 98.2 5.2E-06 1.1E-10 56.2 6.3 55 3-57 21-75 (77)
261 PF00083 Sugar_tr: Sugar (and 98.2 1.8E-08 3.9E-13 94.6 -8.6 157 6-165 277-442 (451)
262 TIGR00926 2A1704 Peptide:H+ sy 98.1 0.00015 3.2E-09 70.4 16.7 164 215-386 2-183 (654)
263 KOG0252 Inorganic phosphate tr 98.1 8.2E-06 1.8E-10 73.2 6.4 128 32-165 363-503 (538)
264 PF07672 MFS_Mycoplasma: Mycop 98.0 0.00034 7.3E-09 58.5 14.2 101 104-213 2-107 (267)
265 PF05631 DUF791: Protein of un 98.0 0.0032 6.9E-08 55.6 20.9 151 226-387 60-218 (354)
266 COG3202 ATP/ADP translocase [E 97.9 0.016 3.4E-07 53.3 32.4 246 15-264 59-350 (509)
267 TIGR00939 2a57 Equilibrative N 97.9 0.0027 5.9E-08 58.9 19.9 52 71-127 105-156 (437)
268 PF03092 BT1: BT1 family; Int 97.8 0.00033 7.3E-09 65.1 13.2 159 222-386 11-176 (433)
269 KOG2816 Predicted transporter 97.8 0.00074 1.6E-08 62.8 14.6 130 246-388 72-202 (463)
270 KOG2325 Predicted transporter/ 97.8 0.00044 9.6E-09 63.7 12.3 179 202-388 36-232 (488)
271 KOG3880 Predicted small molecu 97.7 0.00091 2E-08 57.1 12.2 319 20-356 65-401 (409)
272 KOG2563 Permease of the major 97.5 0.0022 4.8E-08 57.9 12.9 151 226-387 70-237 (480)
273 PRK03612 spermidine synthase; 97.5 0.011 2.3E-07 56.3 18.0 174 206-385 20-198 (521)
274 PF01770 Folate_carrier: Reduc 97.4 0.011 2.5E-07 53.6 15.9 161 219-389 22-186 (412)
275 KOG1479 Nucleoside transporter 97.3 0.02 4.3E-07 51.6 15.8 273 71-355 116-400 (406)
276 PF05978 UNC-93: Ion channel r 97.1 0.075 1.6E-06 41.5 15.6 107 241-357 42-149 (156)
277 PF06779 DUF1228: Protein of u 97.0 0.0062 1.3E-07 41.7 7.9 78 213-300 5-82 (85)
278 PRK03612 spermidine synthase; 96.9 0.033 7.2E-07 53.1 14.5 140 10-151 43-189 (521)
279 TIGR00769 AAA ADP/ATP carrier 96.8 0.14 3.1E-06 47.9 17.6 148 201-357 8-189 (472)
280 COG0477 ProP Permeases of the 96.6 0.2 4.3E-06 43.7 16.8 136 214-359 16-158 (338)
281 PF06963 FPN1: Ferroportin1 (F 96.3 0.88 1.9E-05 42.2 19.1 177 201-380 3-195 (432)
282 KOG3626 Organic anion transpor 96.2 0.06 1.3E-06 52.4 11.3 181 200-389 96-347 (735)
283 PF02487 CLN3: CLN3 protein; 96.1 0.06 1.3E-06 48.9 10.3 115 16-132 280-395 (402)
284 KOG0637 Sucrose transporter an 96.1 0.0074 1.6E-07 54.7 4.5 151 201-356 33-202 (498)
285 KOG3098 Uncharacterized conser 95.9 0.15 3.3E-06 47.2 12.0 104 26-130 288-410 (461)
286 KOG1479 Nucleoside transporter 95.2 2.3 5E-05 38.8 16.6 183 200-387 18-206 (406)
287 PF03137 OATP: Organic Anion T 95.2 0.0039 8.4E-08 59.5 -1.0 165 214-387 16-252 (539)
288 KOG3097 Predicted membrane pro 95.1 1.4 3E-05 38.7 14.0 98 28-128 69-181 (390)
289 PF00854 PTR2: POT family; In 95.0 0.3 6.6E-06 44.6 10.8 86 300-386 35-124 (372)
290 PF01733 Nucleoside_tran: Nucl 94.4 0.01 2.3E-07 52.6 -0.2 55 299-353 249-304 (309)
291 KOG3574 Acetyl-CoA transporter 93.2 3.2 7E-05 37.5 12.7 179 200-389 31-240 (510)
292 PF07857 DUF1632: CEO family ( 93.1 1.6 3.4E-05 37.1 10.5 38 206-243 184-225 (254)
293 KOG4332 Predicted sugar transp 93.0 1.3 2.8E-05 37.8 9.6 136 19-154 284-426 (454)
294 KOG2601 Iron transporter [Inor 90.4 7.1 0.00015 35.3 11.7 124 27-150 73-217 (503)
295 KOG1237 H+/oligopeptide sympor 90.3 14 0.00031 35.8 14.9 170 205-383 42-243 (571)
296 KOG4830 Predicted sugar transp 88.5 0.17 3.8E-06 42.5 0.6 62 192-253 193-254 (412)
297 KOG2601 Iron transporter [Inor 86.3 15 0.00033 33.2 11.1 174 200-376 27-217 (503)
298 KOG3880 Predicted small molecu 79.0 11 0.00024 33.2 7.3 65 67-131 337-401 (409)
299 TIGR00939 2a57 Equilibrative N 77.1 65 0.0014 30.2 14.0 81 305-385 113-196 (437)
300 PF02990 EMP70: Endomembrane p 76.8 39 0.00084 32.6 11.3 31 233-263 290-320 (521)
301 KOG3810 Micronutrient transpor 72.4 13 0.00027 33.4 6.1 95 20-116 274-370 (433)
302 PF06912 DUF1275: Protein of u 72.3 54 0.0012 27.0 15.4 48 99-147 153-200 (209)
303 PF02990 EMP70: Endomembrane p 70.9 33 0.00071 33.1 9.2 35 235-269 296-330 (521)
304 PF03219 TLC: TLC ATP/ADP tran 68.0 1.2E+02 0.0025 29.1 23.7 34 232-265 172-205 (491)
305 COG5336 Uncharacterized protei 66.8 19 0.00041 25.8 4.9 34 20-53 45-79 (116)
306 COG5336 Uncharacterized protei 62.7 33 0.00072 24.6 5.5 48 329-376 38-86 (116)
307 PF03596 Cad: Cadmium resistan 56.8 64 0.0014 26.2 7.1 30 125-154 43-72 (191)
308 PRK13629 threonine/serine tran 55.8 1.8E+02 0.0039 27.3 15.9 44 103-151 19-62 (443)
309 PF13000 Acatn: Acetyl-coenzym 55.1 1.8E+02 0.0039 27.9 10.4 63 76-138 409-471 (544)
310 COG4262 Predicted spermidine s 54.8 1.7E+02 0.0036 26.6 10.8 87 13-99 39-132 (508)
311 PF01733 Nucleoside_tran: Nucl 54.7 4.9 0.00011 35.6 0.5 108 22-129 187-305 (309)
312 KOG3097 Predicted membrane pro 48.4 2.1E+02 0.0045 25.8 9.4 60 200-266 29-88 (390)
313 PF02694 UPF0060: Uncharacteri 48.0 57 0.0012 23.4 4.8 50 15-64 52-101 (107)
314 COG1457 CodB Purine-cytosine p 47.5 2.5E+02 0.0054 26.4 20.5 146 98-265 11-157 (442)
315 PF03616 Glt_symporter: Sodium 47.3 2.3E+02 0.0049 26.0 17.3 22 246-267 250-271 (368)
316 COG4769 Predicted membrane pro 46.9 27 0.00058 27.3 3.3 52 25-84 81-132 (181)
317 PF11299 DUF3100: Protein of u 43.0 21 0.00045 29.8 2.3 54 76-130 175-228 (241)
318 PF07760 DUF1616: Protein of u 42.4 2.4E+02 0.0051 24.8 10.0 88 75-164 22-113 (287)
319 PRK02237 hypothetical protein; 42.3 95 0.0021 22.4 5.2 48 17-64 56-103 (109)
320 KOG1277 Endosomal membrane pro 41.6 50 0.0011 30.6 4.6 27 240-266 327-357 (593)
321 PF11947 DUF3464: Protein of u 41.5 98 0.0021 24.1 5.6 82 39-123 56-145 (153)
322 TIGR00836 amt ammonium transpo 40.8 2.2E+02 0.0047 26.5 8.8 51 78-128 281-331 (403)
323 PRK10263 DNA translocase FtsK; 40.6 5.1E+02 0.011 28.4 12.0 36 343-379 141-176 (1355)
324 TIGR03644 marine_trans_1 proba 40.3 2.2E+02 0.0047 26.5 8.7 48 80-128 297-344 (404)
325 PF12805 FUSC-like: FUSC-like 39.5 2.3E+02 0.0049 24.8 8.5 24 141-164 78-101 (284)
326 PF10183 ESSS: ESSS subunit of 39.4 44 0.00095 24.1 3.3 31 133-163 55-85 (105)
327 PF01925 TauE: Sulfite exporte 39.0 2.3E+02 0.005 23.7 11.0 33 118-150 70-102 (240)
328 PF07672 MFS_Mycoplasma: Mycop 38.7 2.6E+02 0.0056 24.2 9.5 66 20-86 144-218 (267)
329 PF03706 UPF0104: Uncharacteri 38.3 2.6E+02 0.0057 24.1 15.5 57 7-63 16-73 (294)
330 PF00909 Ammonium_transp: Ammo 36.8 1.8E+02 0.0039 26.9 7.8 52 77-128 275-326 (399)
331 PF11368 DUF3169: Protein of u 34.0 3E+02 0.0064 23.5 9.9 22 107-128 9-30 (248)
332 PF04226 Transgly_assoc: Trans 33.8 1.1E+02 0.0023 18.4 4.4 35 122-156 5-43 (48)
333 COG4262 Predicted spermidine s 33.4 3.8E+02 0.0082 24.5 14.6 131 225-361 32-168 (508)
334 PF02667 SCFA_trans: Short cha 32.7 2.7E+02 0.006 26.2 8.0 18 190-207 241-258 (453)
335 TIGR01666 YCCS hypothetical me 32.5 5E+02 0.011 26.3 10.3 54 34-88 40-97 (704)
336 COG2962 RarD Predicted permeas 32.2 3.5E+02 0.0075 23.7 11.2 33 192-224 61-93 (293)
337 PF03741 TerC: Integral membra 32.2 2.7E+02 0.0059 22.5 17.4 59 87-147 11-69 (183)
338 KOG1278 Endosomal membrane pro 31.9 32 0.0007 32.7 2.0 33 232-264 355-387 (628)
339 COG1268 BioY Uncharacterized c 30.4 1.8E+02 0.004 23.5 5.8 23 24-46 89-111 (184)
340 PRK10720 uracil transporter; P 30.3 4.6E+02 0.0099 24.6 9.3 19 44-62 299-317 (428)
341 PRK15049 L-asparagine permease 30.2 5E+02 0.011 24.9 10.8 20 136-155 446-465 (499)
342 TIGR01667 YCCS_YHJK integral m 29.2 6.2E+02 0.013 25.7 10.7 55 33-88 39-97 (701)
343 PF02632 BioY: BioY family; I 28.8 1.4E+02 0.0031 23.1 4.8 25 24-48 60-84 (148)
344 PF11151 DUF2929: Protein of u 28.4 1.6E+02 0.0034 18.5 4.9 40 117-156 11-50 (57)
345 PF06783 UPF0239: Uncharacteri 28.3 1.7E+02 0.0038 20.0 4.4 20 138-157 23-42 (85)
346 PRK10666 ammonium transporter; 28.3 5.1E+02 0.011 24.4 9.3 50 79-128 306-355 (428)
347 PF04024 PspC: PspC domain; I 26.7 1.5E+02 0.0033 18.8 3.9 33 131-163 20-60 (61)
348 PF05255 UPF0220: Uncharacteri 26.4 3.3E+02 0.0072 21.6 9.1 57 100-156 14-76 (166)
349 KOG2881 Predicted membrane pro 26.2 4.3E+02 0.0093 22.8 10.9 13 138-150 130-142 (294)
350 PF06645 SPC12: Microsomal sig 26.1 1.8E+02 0.004 19.5 4.4 37 112-151 12-48 (76)
351 PF07099 DUF1361: Protein of u 24.9 3.5E+02 0.0077 21.4 7.4 37 3-39 40-83 (168)
352 PF02694 UPF0060: Uncharacteri 24.5 1.2E+02 0.0026 21.8 3.4 31 236-266 54-84 (107)
353 COG3162 Predicted membrane pro 24.2 2.7E+02 0.0058 19.8 5.8 39 192-230 14-54 (102)
354 PF01810 LysE: LysE type trans 24.1 3.8E+02 0.0081 21.5 15.9 18 248-265 145-162 (191)
355 COG1811 Uncharacterized membra 24.1 3.7E+02 0.008 22.4 6.4 56 248-312 15-70 (228)
356 COG3619 Predicted membrane pro 22.5 4.7E+02 0.01 22.0 17.4 121 16-136 54-196 (226)
357 PF15061 DUF4538: Domain of un 22.4 1.7E+02 0.0036 18.5 3.3 24 136-159 4-27 (58)
358 PF09527 ATPase_gene1: Putativ 22.2 2E+02 0.0043 17.6 5.5 34 25-58 8-42 (55)
359 TIGR02978 phageshock_pspC phag 22.0 2.4E+02 0.0052 21.0 4.7 35 131-165 20-64 (121)
360 PF02554 CstA: Carbon starvati 21.9 6.2E+02 0.014 23.2 14.9 40 98-142 47-87 (376)
361 PF13386 DsbD_2: Cytochrome C 21.7 4.4E+02 0.0096 21.4 17.6 35 232-266 146-180 (199)
362 PF00909 Ammonium_transp: Ammo 21.7 6.5E+02 0.014 23.3 12.4 30 104-133 107-136 (399)
363 PRK02237 hypothetical protein; 20.8 2.1E+02 0.0046 20.7 4.0 31 236-266 56-86 (109)
364 PF07456 Hpre_diP_synt_I: Hept 20.7 3.1E+02 0.0067 21.3 5.2 50 24-81 68-117 (148)
365 COG1284 Uncharacterized conser 20.1 3.6E+02 0.0079 23.7 6.2 44 75-119 117-165 (289)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-42 Score=305.19 Aligned_cols=357 Identities=22% Similarity=0.263 Sum_probs=300.8
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
.++|++.+|+|+|..+.|+..|.|.+++.+++|+...+.||+.||++++..+.++.++++++ ++++||+.++++|++.
T Consensus 34 gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~--alAp~f~~Ll~aR~~~ 111 (394)
T COG2814 34 GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS--ALAPSFAVLLLARALA 111 (394)
T ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999 4559999999999999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccC
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
|+..|.+++...++..|..|++||++++++...+.+++.++|.+++.++.+.+|||.+|++.+.++++..+..+..+|
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-- 189 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-- 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999998888888888
Q ss_pred CCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHh
Q 016338 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (391)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (391)
|++.++..+. +..+..+.+|+|+.+...+..++...+.+..++|+.+++++..|+|++..++..
T Consensus 190 ~~~~~~~~~~----------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~L 253 (394)
T COG2814 190 PSEISGSLPG----------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVL 253 (394)
T ss_pred CccCCCCCCc----------------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHH
Confidence 2221111111 112346889999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC-chhHHHHHHHHHHHhhhhcccchhh
Q 016338 243 AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLL 321 (391)
Q Consensus 243 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (391)
..+++++.+|..+.|++.|| +.+ ..+.....+..+.+..+.... +.+.......+..+...........
T Consensus 254 l~~Gv~~~~Gn~~gGrl~dr-~~~---------~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~ 323 (394)
T COG2814 254 LAFGIAGFIGNLLGGRLADR-GPR---------RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQT 323 (394)
T ss_pred HHHHHHHHHHHHHHhhhccc-cch---------hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHH
Confidence 99999999999999999999 532 333344444444444444433 3434444444433333333334444
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCccc
Q 016338 322 NIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGERV 390 (391)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (391)
...+..||.+..+.+++....++|..+|..++|.+.|+.| +....+..+...+++.++.+...+.+|+
T Consensus 324 ~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 324 RLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 4555667999999999999999999999999999999987 9999999999999998888776665543
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.9e-44 Score=308.42 Aligned_cols=378 Identities=20% Similarity=0.227 Sum_probs=314.2
Q ss_pred CccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
++.+.|.+.+|.++|.+|+|.+.+.+.+.|.++.++.|.++||.++|+.+..++++.++..++.++. ++.+.+.+..+
T Consensus 48 F~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs--~s~~~~~~l~~ 125 (448)
T COG2271 48 FNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS--PSLFLFAVLWV 125 (448)
T ss_pred HhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh--hHHHHHHHHHH
Confidence 3578899999999999999999999999999999999999999999999999999999999999655 89999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHH--HHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT--PIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~--~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
++|..+|..+|.+...+..|+|+||||+..++++++-++|..+.|++. +.+..+.+||..|++.++++++..+..++.
T Consensus 126 lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 126 LNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 888888999999999999999999999999
Q ss_pred cccCCCCCCCCChhHHHHHHcCCCcccccC-----CCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCC
Q 016338 159 VTNDPCNSPFVSKSELRLIQAGKSDSVKKR-----NPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNV 233 (391)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 233 (391)
.+|+|++..-.+.+|.+....+..++++++ .+.-.+.+++||.+|.+++..++.+..-+++..|.|.|+.|+.|+
T Consensus 206 ~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~ 285 (448)
T COG2271 206 LRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGF 285 (448)
T ss_pred hCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC
Confidence 999998876544444322211111111111 122346788999999999999999999999999999999999999
Q ss_pred CcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCch--hHHHHHHHHHHHh
Q 016338 234 NLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP--AVAAVLITIALSL 311 (391)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 311 (391)
|..+++...+.+-.++++|.++.|+++||+-+.+ |.....+.+++..+++..+...++. ....++..+.++.
T Consensus 286 s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgr------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~ 359 (448)
T COG2271 286 SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGR------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFL 359 (448)
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccc------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986432 5556666666677777777666644 3333333333322
Q ss_pred hhhcccchhhhhhhccc-cchhHHHHHHHHHHHH-HHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccC
Q 016338 312 SSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 312 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
........-....|+.| +..|++.|+...++++ |.+.+....|++.|.+| |...|.+..+..+++.+++....+.
T Consensus 360 IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 360 IYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred HhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHHHHHHHHHHHHHHhh
Confidence 22222233345668888 7899999999999999 99999999999999988 8888888888888887777665543
No 3
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-42 Score=313.81 Aligned_cols=381 Identities=34% Similarity=0.674 Sum_probs=347.0
Q ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhc
Q 016338 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (391)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~ 88 (391)
..++++|++|.+++.+.++.|+.+++++.|+++||+|.|+++..+.++.++++++.+++...+++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 45789999999999999999999999999999999999999999999999999999999888888889999999999999
Q ss_pred hhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh-cCchhHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 016338 89 AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSP 167 (391)
Q Consensus 89 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (391)
.+|+...+.++|.|++||++..++..++..+|.+++.+++|++.+. +||+++|++.++.+++..++++.+..|+|++++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred CCChhHHHHHHcCCCcccccC-CCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHH
Q 016338 168 FVSKSELRLIQAGKSDSVKKR-NPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPW 246 (391)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 246 (391)
..+++|++..++++.+++.++ .+.+++++++++.+|.+.+..++.....+.+..|.|.|+++.+|+|..+.|++.+++.
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~ 304 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPF 304 (466)
T ss_pred CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHH
Confidence 999999988877766554433 6779999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCc--hhHHHHHHHHHHHhhhhcccchhhhhh
Q 016338 247 GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS--PAVAAVLITIALSLSSFSQAGYLLNIQ 324 (391)
Q Consensus 247 ~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (391)
+.+.+..+++|.++||+.+|+......||..-.++..+.++.++.+.+.+. .+...+++.+..+..+...+..+....
T Consensus 305 l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~ 384 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQ 384 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhh
Confidence 999999999999999998876666777899999999999999999888764 334556666667777777788888888
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHHHHhhHhhc--cccchhHHHHHHHHHHHHHHHHHHHhccCcc
Q 016338 325 EIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQ--WLGSFQAFLTVTAGLYFVTTIFWNLYSTGER 389 (391)
Q Consensus 325 ~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
+..|++.+..+|+.+....+.++++|.+.|.+.. ...+|+..|.+.+++.+++.+.+.++.+.++
T Consensus 385 ~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~ 451 (466)
T KOG2532|consen 385 DIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEP 451 (466)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcc
Confidence 8899999999999999999999999999999983 2345999999999999999998888765543
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=6.2e-41 Score=307.60 Aligned_cols=354 Identities=16% Similarity=0.124 Sum_probs=284.9
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
+++|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+..+..++++.+++ ++|++.+++.|+++
T Consensus 30 ~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~~~ 107 (390)
T PRK03545 30 GLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSAL--AWNFTVLLISRIGI 107 (390)
T ss_pred cchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999854 49999999999999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccC
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
|++.+...+...+++.|++|+|||++++++.+.+.++|..++|++++.+.++.|||+.|++.+++.++..+......||+
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~ 187 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLL 187 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999888999999999999999999999999999999999999999999999999999999988877766666555654
Q ss_pred CCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHh
Q 016338 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (391)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (391)
|++++ + ..++.++.+|+|.++......++.........++.+.++++..|+|+.+++.+.
T Consensus 188 ~~~~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~ 247 (390)
T PRK03545 188 PSEHS----G----------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLL 247 (390)
T ss_pred CCCCc----c----------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHH
Confidence 33211 0 112356788999888776666666666666778888898888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhh
Q 016338 243 AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLN 322 (391)
Q Consensus 243 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (391)
....++.++++++.+++.||.++| ....................++.+.......+.+.......+.....
T Consensus 248 ~~~~~~~~~g~~~~g~l~dr~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 318 (390)
T PRK03545 248 LLFGGAGIIGSVLFSRLGNRHPSG---------FLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVK 318 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhccchh---------HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 999999999999999999998743 22222222222222222333344433333333333333334445566
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 323 IQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
..+..|+++++++|+.+...++|..+||.+.|.+.|+.| ++..+...+.+.+++.+......|++
T Consensus 319 ~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
T PRK03545 319 VLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSILIFRRF 383 (390)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHHcccc
Confidence 667788899999999999999999999999999999998 89999999998888888777666543
No 5
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=9.6e-41 Score=301.45 Aligned_cols=353 Identities=14% Similarity=0.073 Sum_probs=267.4
Q ss_pred CccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
+++.+|.+++|+|+|++|.|++.+.+.+++.+++++.|+++||+|||+++.........+.... ...+|++.+++.|+
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~R~ 87 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL--LDPFNYEWLLACQL 87 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999999987765555544443322 22379999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
++|++.+. .+.....++|++|+|+|++++++.+.+..+|..+++++++.+.+++|||+.|.+.++++++..++.++..|
T Consensus 88 l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp 166 (368)
T TIGR00903 88 LAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALP 166 (368)
T ss_pred HHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999986 46666777999999999999999999999999999999999999999999999999998888887888888
Q ss_pred cCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhH
Q 016338 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 240 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 240 (391)
|+|+++++..+.+ +..+++++++|||.+|...+..++....++.+.+|+|+|+++ .|++.+ .+.
T Consensus 167 ~~p~~~~~~~~~~--------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~ 230 (368)
T TIGR00903 167 ALPFQAAEGFGFK--------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGD 230 (368)
T ss_pred CCCCCCCCCcchH--------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHH
Confidence 8776542211000 001246789999999999999999999999999999999987 678864 555
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchh
Q 016338 241 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 320 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (391)
......+.+.++ .+++.||..||+. |+..........++........++......+..+..++.....+..+
T Consensus 231 ~~~l~~~~g~~g---~~~~~d~~~r~~~-----r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 302 (368)
T TIGR00903 231 AVALAILAGLIG---VAVIPDRVARAGL-----RSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIM 302 (368)
T ss_pred HHHHHHHHHHHH---HHHhhHHhhhhhh-----HHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHH
Confidence 555555544444 5788888875531 12222222233333333333333333333333434344444445566
Q ss_pred hhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 016338 321 LNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 321 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
.+..|..| +.|+++.|+.+..+++++..+|.+.+.+.. | ....|.+.+...+++.+..++
T Consensus 303 ~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i~~~~~~~ 363 (368)
T TIGR00903 303 DWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEAYFTFLAILITIAFAIALL 363 (368)
T ss_pred HHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHHHHHh
Confidence 78888888 799999999999999999999999998874 4 667777778777777776653
No 6
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2e-41 Score=317.57 Aligned_cols=375 Identities=15% Similarity=0.132 Sum_probs=281.1
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh---hccchHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA---ATHSTASLLAV 78 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a---~~~~~~~~~~~ 78 (391)
++..|.+.+|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+..++. .++|++.+++.
T Consensus 49 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (467)
T PRK09556 49 KAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIAL 128 (467)
T ss_pred hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999888887777665432 35899999999
Q ss_pred HHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc---CchhHHHHHHHHHHHHHHHH
Q 016338 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI---GISGPFILFSSLGLLWLSTW 155 (391)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~---gwr~~f~~~~~~~~~~~~~~ 155 (391)
|+++|++.+...|...++++||+|+++||+++|+.+.+.++|.++++.+..++.+.. +||..|.+.+++.++..++.
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~ 208 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIG 208 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987776653 69999999888888877777
Q ss_pred hhccccCCCCCCCCChhHHHHHH--cCCCcccccC-C-Ccc-HHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 016338 156 TSKVTNDPCNSPFVSKSELRLIQ--AGKSDSVKKR-N-PPS-LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV 230 (391)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (391)
++..+|+|++++..++++....+ ++.+++++++ . .+. .++.+|+|.+|...+..++.+..+.+...|.|.|+++.
T Consensus 209 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~ 288 (467)
T PRK09556 209 LRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQE 288 (467)
T ss_pred HHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 77777776654332222210000 0000000000 1 111 23378999999999999998888888999999999988
Q ss_pred hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHH-HHHHH
Q 016338 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVL-ITIAL 309 (391)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 309 (391)
+|+|..+++.......++..+++++.|+++||+++| +.....................++.....+. +.++.
T Consensus 289 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 361 (467)
T PRK09556 289 LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR-------RALVACIALALIIFTLGVYQHATSEYMYLASLFALGF 361 (467)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------chHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 999999999999989999999999999999999876 2222211111112112222232333333222 22222
Q ss_pred Hhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHH-HHHHHHHHhhHhhc------------cccchhHHHHHHHHHHH
Q 016338 310 SLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQ------------WLGSFQAFLTVTAGLYF 375 (391)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~i~~~~~g~l~~------------~~g~~~~~~~~~~~~~~ 375 (391)
...+.. ........|..| +++|++.|+.+..+++ |.+++|.+.|.+.| ..| |+..|.+..++.+
T Consensus 362 ~~~~~~-~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~-~~~~f~~~~~~~~ 439 (467)
T PRK09556 362 LVFGPQ-LLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG-WAGTFAALDIAAI 439 (467)
T ss_pred HHhhHH-HHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC-hHHHHHHHHHHHH
Confidence 221111 112244457777 7999999999999997 77999999999999 456 8999999888888
Q ss_pred HHHHHHHHhc
Q 016338 376 VTTIFWNLYS 385 (391)
Q Consensus 376 ~~~~~~~~~~ 385 (391)
++.+..+..+
T Consensus 440 ~~~~~~~~~~ 449 (467)
T PRK09556 440 GCICLMAIVA 449 (467)
T ss_pred HHHHHHHHHH
Confidence 8877766553
No 7
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2.8e-40 Score=304.20 Aligned_cols=378 Identities=26% Similarity=0.448 Sum_probs=297.1
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
+...|.+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++..+.++ ++|++.+++.|++
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 91 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAF--AGAYVSLYILRVL 91 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHH--HcCHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999998854 4899999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+....++.|++|+|+|++++++.+...++|..+++.+++.+.+..+||+.|.+.+++.++..+......||
T Consensus 92 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (399)
T TIGR00893 92 LGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPD 171 (399)
T ss_pred HHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecC
Confidence 99999999999999999999999999999999999999999999999999999999999999998888877777767777
Q ss_pred CCCCCCCCChhHHHHHHcC-----CCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc
Q 016338 162 DPCNSPFVSKSELRLIQAG-----KSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 236 (391)
+|++++..++++++...+. ++++++++...+.++.+|+|+++...+..++..........+.|.|+++.+|.++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (399)
T TIGR00893 172 PPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSIL 251 (399)
T ss_pred CCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHH
Confidence 6654433322222211111 11112223345678889999999999999999999999999999999998999999
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcc
Q 016338 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQ 316 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (391)
+.+.+.....+...+++++.+++.||+++|+...... ......+..............++.+.......+.....+ ..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 329 (399)
T TIGR00893 252 EAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFA-RKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AG 329 (399)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHH-HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hh
Confidence 9999999999999999999999999999863111111 111111211122222222222233333333333333333 55
Q ss_pred cchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 016338 317 AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 317 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
+....+..|..| ++|+++.|+.+...++|..++|.+.|.+.|..|++...+.+.++..+++.+..+.
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 330 AIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 667777778777 8999999999999999999999999999999887888888888887777666543
No 8
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.9e-40 Score=311.38 Aligned_cols=378 Identities=26% Similarity=0.470 Sum_probs=298.9
Q ss_pred HhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchh
Q 016338 11 KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAM 90 (391)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~ 90 (391)
|+++|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++..++++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 78999999999999999999999999999999999999999999999999888755545678899999999999999999
Q ss_pred hhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-CchhHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 016338 91 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 169 (391)
Q Consensus 91 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (391)
+....++.|++|+++|++++++...+..+|..+++++++.+.+.. |||+.|++.+++.++..+..+...+|+|+++++.
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~ 229 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCI 229 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCC
Confidence 999999999999999999999999999999999999999999884 9999999999998888877777778877665544
Q ss_pred ChhHHHHHHcCCCc-ccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHH
Q 016338 170 SKSELRLIQAGKSD-SVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGT 248 (391)
Q Consensus 170 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (391)
+++|++..++..++ +++++.+.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|.+..+.++..+...++
T Consensus 230 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~ 309 (465)
T TIGR00894 230 SKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLF 309 (465)
T ss_pred CHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHH
Confidence 44444333222111 11222344689999999999999999999999999999999999998999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHhHhhHHHHHHhhc-CCchhHHHHHHHHHHHhhhhcccchhhhhhhc
Q 016338 249 MAVSGYMAGKASDSLIKAGYSLTL-VRKIMQSIGFIGPGVSLLCLNY-AKSPAVAAVLITIALSLSSFSQAGYLLNIQEI 326 (391)
Q Consensus 249 ~~~~~~~~g~l~dr~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (391)
..++.++.|+++||.++|+..... .++.....+..+..+..+.... ..+.........+.....+...+.......+.
T Consensus 310 ~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 389 (465)
T TIGR00894 310 AWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDL 389 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhc
Confidence 999999999999999876543222 2223333332222222222222 22333333334444444444444455566788
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHhhHhhccc--cchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 327 APDCAGFLHGIANSAGTLAAIISTIGTGYFVQWL--GSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 327 ~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
.|+.+|.+.|+.+..+.+++.++|.+.|.+.|.. +++...|.+.++..+++.++.....+.+
T Consensus 390 ~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~ 453 (465)
T TIGR00894 390 APRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAE 453 (465)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecce
Confidence 8899999999999999999999999999988753 4588889999888888888777665544
No 9
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.7e-40 Score=305.99 Aligned_cols=363 Identities=16% Similarity=0.218 Sum_probs=273.6
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
+...|.+++|+|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.++..++.+++++ ++|++.+++.|++
T Consensus 28 ~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l 105 (412)
T TIGR02332 28 GFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMF--ATGPESLYLLRIL 105 (412)
T ss_pred HHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999954 5999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh------hcCchhHHHHHHHHHHHHHHHH
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS------TIGISGPFILFSSLGLLWLSTW 155 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~------~~gwr~~f~~~~~~~~~~~~~~ 155 (391)
+|++.+...+....++.|++|+|+|++++++++...++|..+++.+++++.+ ..|||+.|.+.+++.++..++.
T Consensus 106 ~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 106 VGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred HHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998864 3699999999998888877777
Q ss_pred hhccccCCCCCCCCChhHHHHHHc----CC---Ccccc--cCC----CccHHHhhcCCchHHHHHHHHHHHHHHHHHHHh
Q 016338 156 TSKVTNDPCNSPFVSKSELRLIQA----GK---SDSVK--KRN----PPSLRHLLSKLPSWTVIIANITNNWGYFVLLSW 222 (391)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (391)
+++.||+|++.+..++++++..++ +. +++++ +++ ...++++ ++|.+|...+..++....++.+.+|
T Consensus 186 ~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (412)
T TIGR02332 186 WFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAINIW 264 (412)
T ss_pred hhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888887644222222211110 10 00000 011 1123333 4688888888888888889999999
Q ss_pred hHHHHHhh-hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHH
Q 016338 223 MPIYFNTV-FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVA 301 (391)
Q Consensus 223 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (391)
+|.++++. .|.+..+++.......++..++.++.|+++||+++| +.... .........+......++....
T Consensus 265 ~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r-------~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 336 (412)
T TIGR02332 265 TPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKER-------KHHTA-LPYLFAAAGWLLASATDHNLIQ 336 (412)
T ss_pred HHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCcc-------HHHHH-HHHHHHHHHHHHHHhcCCHHHH
Confidence 99999883 467888889999999999999999999999999865 32221 2222222222222222222222
Q ss_pred HHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHH
Q 016338 302 AVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYF 375 (391)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~ 375 (391)
....++.........+.......|..| ++|+++.|+.+...++|++++|.+.|.+.|..|+|+..+.+.++..+
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~~ 411 (412)
T TIGR02332 337 LLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALLV 411 (412)
T ss_pred HHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHHh
Confidence 221221111111112223333455555 89999999999999999999999999999998889988887766543
No 10
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=3.3e-40 Score=306.45 Aligned_cols=376 Identities=15% Similarity=0.184 Sum_probs=281.1
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|.+.+++|.|.++.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++.++ ++|++.+++.|++
T Consensus 43 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l 120 (434)
T PRK11663 43 NAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGF--SSSLWAFALLWVL 120 (434)
T ss_pred HHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999998855 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.|...+...+++.|++|+|+|++++++.+...++|..+++.+.+.+.+.+|||+.|++.+++.++..+...+..||
T Consensus 121 ~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 121 NAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999998999999999999999999999999999999999999999999999999999999888877665555556677
Q ss_pred CCCCCCCCChhH--HHHHHcCCCcccccCCCcc-H-HHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcch
Q 016338 162 DPCNSPFVSKSE--LRLIQAGKSDSVKKRNPPS-L-RHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (391)
Q Consensus 162 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (391)
+|++.+..+.++ .+..+...+.++++.+.++ + +..+++|.+|...+..+.....+..+.+|+|.|+++.+|++..+
T Consensus 201 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 280 (434)
T PRK11663 201 KPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT 280 (434)
T ss_pred CHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence 665332111110 0000000000001111111 1 23667899999888888888888888899999998878999999
Q ss_pred hhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH---HHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhh
Q 016338 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI---MQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSF 314 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (391)
++...+...+++.+++++.|++.||+.+++ |+. ....+.......+..... .+...... ..+..+....
T Consensus 281 a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~------r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~g~~~~ 352 (434)
T PRK11663 281 ANSAVSMFELGGFIGALVAGWGSDKLFNGN------RGPMNLIFAAGILLSVGSLWLMPF-ASYVMQAA-CFFTIGFFVF 352 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHhccCC------ccHHHHHHHHHHHHHHHHHHHccc-ccHHHHHH-HHHHHHHHHh
Confidence 999999999999999999999999994331 111 112222222222222222 22222211 1222222111
Q ss_pred c-ccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 315 S-QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 315 ~-~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
. .........|..| ++++++.|+.+...++|++++|.+.|.+.|+.| +...|...+++.+++.+..+...|++
T Consensus 353 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 353 GPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTGFFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred hHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1 1122344567666 899999999999999999999999999999998 99999999888888777666554443
No 11
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.4e-39 Score=298.26 Aligned_cols=354 Identities=14% Similarity=0.135 Sum_probs=272.6
Q ss_pred CccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
+++.+|++++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++ ++|++.+++.|+
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~--a~~~~~ll~~r~ 105 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMREL--YPQSALLLSSAL 105 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHH--CcchHHHHHHHH
Confidence 368899999999999999999999999999999999999999999999999999999999999954 599999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-CchhHHHHHHHHHHHHHHHHhhcc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKV 159 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 159 (391)
++|++.+...+....++.|++| |+|+++++.++.+...|..+++.+++.+.++. +||+.+...++..++..+..+...
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999997 88999999999999999999999999988875 899988776665544433333222
Q ss_pred ccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhh
Q 016338 160 TNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 239 (391)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 239 (391)
+++|+++++ ++ .+.++.+++|+.|...+..++....+....+|.|.|+++ +|.++.+++
T Consensus 185 ~~~~~~~~~----------------~~----~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag 243 (393)
T PRK09705 185 AREVASSHK----------------TT----TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSG 243 (393)
T ss_pred cCCCccccC----------------CC----cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhh
Confidence 222211100 00 012345677888888777777788888899999999988 799999999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccch
Q 016338 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGY 319 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (391)
...+...+++++++++.+++.||.++| .....+.....+........+.........+.+.+.. ...+..
T Consensus 244 ~~~~~~~i~~i~g~~~~g~l~~r~~~~---------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~g~g~g-~~~~~~ 313 (393)
T PRK09705 244 SLLALMTLGQAAGALLMPAMARHQDRR---------KLLMLALVLQLVGFCGFIWLPLQLPVLWAMVCGLGLG-GAFPLC 313 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccch---------HHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHhcc-chHHHH
Confidence 999999999999999999999999864 3333344444444333222122111122222222222 222333
Q ss_pred h-hhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 320 L-LNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 320 ~-~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
. ....+..| +++++..|+.+...++++.++|.+.|++.|+.|++...+.+..++.++..+....+.+++
T Consensus 314 ~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 314 LLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3 33344444 689999999999999999999999999999999888888888888777777666555443
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=3.5e-38 Score=291.27 Aligned_cols=358 Identities=20% Similarity=0.206 Sum_probs=275.7
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++..|.+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+..+..++.+++++ +++++.+++.|++
T Consensus 35 ~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 112 (406)
T PRK11551 35 GVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQ--AWDFPSLLVARLL 112 (406)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHH--hccHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999998888744 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.+++.+.+..+||+.|++.++..++..+......||
T Consensus 113 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (406)
T PRK11551 113 TGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPE 192 (406)
T ss_pred HHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999888888999999999887777666666666777
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhc---CCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchh
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLS---KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 238 (391)
+|++++++++++. ++...++.++ ++..+......+......+....|.|.++++ .|+++.+.
T Consensus 193 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~ 257 (406)
T PRK11551 193 SRAFAQAAGAGKQ--------------RAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQA 257 (406)
T ss_pred ChhHHhccCcchh--------------hhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhh
Confidence 6543221110000 0001112222 2233444444555556667778899999988 79999999
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccc
Q 016338 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 318 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (391)
+.......++.++++++.|++.||+++| ..+..+.+...+........++.+.......+.+.......+.
T Consensus 258 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 328 (406)
T PRK11551 258 GLVQIAFNIGGALGSLLIGALMDRLRPR---------RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSV 328 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHH---------HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999999999864 3333344444444444444444444333333333333334455
Q ss_pred hhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 319 YLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 319 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
......|..| ++|+++.|+.+...+++..++|.+.|.+.|+.+++...+.......+++.++.+...
T Consensus 329 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 329 LYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666777766 899999999999999999999999999999877677777777777777666655443
No 13
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=5.3e-38 Score=287.20 Aligned_cols=356 Identities=17% Similarity=0.170 Sum_probs=269.8
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|.+++|+|.|.++.|+..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++++ ++|++.+++.|++
T Consensus 23 ~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~r~l 100 (382)
T PRK10091 23 MGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTL--SSSYLMLAIGRLV 100 (382)
T ss_pred HhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+....++.|++|+++|++++++...+..+|..+++++++.+.+..|||+.|.+.+++.++..+..++..||
T Consensus 101 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~ 180 (382)
T PRK10091 101 SGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPD 180 (382)
T ss_pred HHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999988888899999999999999999999999999999999999999999999999999998877766666666676
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
.+++++. +. ++..+.+|+++.|......++.....+...++.+.++++..|.++.+.+.+
T Consensus 181 ~~~~~~~---~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~ 240 (382)
T PRK10091 181 IRDEAKG---GL-----------------REQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFI 240 (382)
T ss_pred CCccccc---CH-----------------HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 5432110 00 011245677777776665555555555666777888888789999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhh-cCCchhHHHHH-HHHHHHhhhhcccch
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN-YAKSPAVAAVL-ITIALSLSSFSQAGY 319 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~ 319 (391)
.+...++..+++++.+++.||+++| .....+.....+..+... ..++.+..... .+...+..+...+..
T Consensus 241 ~~~~~~~~~ig~~~~g~l~~r~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 311 (382)
T PRK10091 241 MMLVGLGMVLGNLLSGRLSGRYSPL---------RIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQ 311 (382)
T ss_pred HHHHHHHHHHHhHHHheeccccCch---------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999999999999999999864 333344444444443332 22333332222 222222222222222
Q ss_pred hhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCccc
Q 016338 320 LLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGERV 390 (391)
Q Consensus 320 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (391)
....++..+ +.++.+ ..+...++|..++|.+.|.+.|..++|+..+...++..++.........++|++
T Consensus 312 ~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (382)
T PRK10091 312 ILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQ 381 (382)
T ss_pred HHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 233444444 445544 346778899999999999999976669999998877777776666555554443
No 14
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.7e-37 Score=284.35 Aligned_cols=345 Identities=17% Similarity=0.172 Sum_probs=268.8
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
+.+|++.+|+|.|+++.++..+.+.++..+++++.|+++||+|||+.+..+..+.+++.+++++ ++|++.+++.|+++
T Consensus 41 ~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~ 118 (394)
T PRK10213 41 SLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSF--ANSFSLLLIGRACL 118 (394)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHH--HChHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999998854 49999999999999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccC
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
|++.+...+...+++.|++|+|+|++++++.....++|..++|++++.+.+.+|||+.|++.+++.++..+......||+
T Consensus 119 G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 119 GLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998877776555544445554
Q ss_pred CCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHh
Q 016338 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (391)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (391)
++++++ ..++.++.+|+|.++...+..++.........++.++++.+++|+++.+.+...
T Consensus 199 ~~~~~~--------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~ 258 (394)
T PRK10213 199 PGEPSH--------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVL 258 (394)
T ss_pred Cccccc--------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHH
Confidence 321110 011345778899998877766666666666677764444455799999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhh
Q 016338 243 AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLN 322 (391)
Q Consensus 243 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (391)
...+++..++..+.+++.||.+ ++...............+....++.+......++.+...+...+.....
T Consensus 259 ~~~~~~~iig~~~~~~l~~r~~---------~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~ 329 (394)
T PRK10213 259 LSFGIASFVGTSLSSFILKRSV---------KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTW 329 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccc---------hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 9999999999999999999854 2233333333233323333333344444444444444445556666666
Q ss_pred hhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHH
Q 016338 323 IQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTI 379 (391)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (391)
.++..|+++++..+......++|..+||.+.|.+.|..| +...+...+...++..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 330 ITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHHHHHH
Confidence 666667777788888888889999999999999999988 77777776665554443
No 15
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=3.5e-38 Score=288.29 Aligned_cols=350 Identities=18% Similarity=0.208 Sum_probs=275.4
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|.+.+|+|+|+++.+++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++++ ++|++.+++.|++
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 100 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI--ADSLAALYLTYGL 100 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+.....+.|++| |+|+++.++...+.++|..+++++.+.+.+..|||+.|++.+++.++..+..++..+|
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 179 (377)
T TIGR00890 101 ASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGY 179 (377)
T ss_pred HhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheec
Confidence 999999888888889999996 7899999999999999998887777777788899999999999888877776666655
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
+|+++++++++ .+++..+.++.+|+|+++......+...........+.+.|.++ +|.+..+.+..
T Consensus 180 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 245 (377)
T TIGR00890 180 PPGQLIKTNIE-------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLA 245 (377)
T ss_pred CchhccccCcc-------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 44322111000 00111245678899999888777777766666667777778766 78888888999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCch--hHHHHHHHHHHHhhhhcccch
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP--AVAAVLITIALSLSSFSQAGY 319 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 319 (391)
.+...++..+++++.|++.||+++| ..+..+.....+........++. ........+.....+...+..
T Consensus 246 ~~~~~~~~~~~~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 316 (377)
T TIGR00890 246 VSISSIFNGGGRPFLGALSDKIGRQ---------KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLF 316 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh---------hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhcc
Confidence 9999999999999999999999854 33444555555555444433322 222222222233333334445
Q ss_pred hhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHH
Q 016338 320 LLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTT 378 (391)
Q Consensus 320 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 378 (391)
.....|..| ++|+++.|+.+....+|..++|.+.|.+.|+.| ++..+.+.+++.+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 317 PSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHhc
Confidence 566677666 899999999999999999999999999999988 8888888887776654
No 16
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.3e-37 Score=288.84 Aligned_cols=380 Identities=19% Similarity=0.246 Sum_probs=271.1
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhh--ccchHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--THSTASLLAVR 79 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~--~~~~~~~~~~r 79 (391)
++.+|.+.++ |.|+++.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+.+++.. +++++.+++.|
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLL 127 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHH
Confidence 3567888888 99999999999999999999999999999999999999999999999988875531 24788889999
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHH-HHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNV-VGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~-~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
++.|++.+...+.....+.|++|+|+|++++++++.+.++|.. .+|+++..+....|||+.|++.+++.++..++..++
T Consensus 128 ~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 128 FLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAM 207 (452)
T ss_pred HHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888999999999999999999999999874 455544444444599999999988888776777777
Q ss_pred cccCCCCCCCCChhHHHHHHcCC-Ccc-cccCCCcc--HHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCC
Q 016338 159 VTNDPCNSPFVSKSELRLIQAGK-SDS-VKKRNPPS--LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN 234 (391)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 234 (391)
.||+|++....++++.+...++. +++ +++.+..+ .+.++|+|.+|...+..++.+...+....|+|.|++++.|++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s 287 (452)
T PRK11273 208 MRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFA 287 (452)
T ss_pred ccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 77776543222111111000000 000 01111111 134678999999888888888888888999999999988999
Q ss_pred cchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHH--hhcCCchhHHHHHHHHHHHhh
Q 016338 235 LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLC--LNYAKSPAVAAVLITIALSLS 312 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 312 (391)
..+++.......++..++.++.|+++||+++++ |+...........+.... .....+...........+...
T Consensus 288 ~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 361 (452)
T PRK11273 288 LDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGN------RGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLI 361 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC------cchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHH
Confidence 999998888888999999999999999995431 111111111222222222 212222222222211111111
Q ss_pred hhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHH-HHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCcc
Q 016338 313 SFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAII-STIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGER 389 (391)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i-~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
............|..| +.+|+++|+.+...++|+.+ +|.+.|.+.|+.| ++..|.+.++..+++.+....+.+.++
T Consensus 362 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~~ 439 (452)
T PRK11273 362 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGEK 439 (452)
T ss_pred HhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1111122334456666 89999999999999998765 7999999999998 999998888888888777665554443
No 17
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.9e-37 Score=284.73 Aligned_cols=354 Identities=17% Similarity=0.152 Sum_probs=271.2
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|++.+|+|+|+++.+++.+.+.+++.+++++.|++.||+|||+.+..+..+.+++.+++++ +++++.+++.|++
T Consensus 27 g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~~l 104 (394)
T PRK03699 27 GMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMF--SHSLALFSIAMFV 104 (394)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH--cchHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999998854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh-hcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
+|++.+...+...+++.|++|+|+|+++++..+....+|..++|.+.+.+.+ ..|||+.|.+.+++.++..++.++ +
T Consensus 105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~ 182 (394)
T PRK03699 105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLF--S 182 (394)
T ss_pred HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHh--c
Confidence 9999998888899999999999999999999999999999999999887764 579999999988877765554433 2
Q ss_pred cCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhH
Q 016338 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 240 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 240 (391)
+.|+.+++++++ +++.. ++ ..+|.++...+..++....++.+..|.|.|+++++|+|+.+++.
T Consensus 183 ~~p~~~~~~~~~------------~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~ 245 (394)
T PRK03699 183 EFPALGKHAPKA------------DKPVA----KE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGN 245 (394)
T ss_pred CCccccccCccc------------cCccc----cc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhH
Confidence 222211110000 00000 11 12456777777777777778888999999998889999999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchh
Q 016338 241 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 320 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (391)
+.+...++..+++++.+++.||+++| + .+........+....+...++........+..+...+...+...
T Consensus 246 ~~~~~~~~~~ig~~~~g~l~dr~~~~-------~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~ 316 (394)
T PRK03699 246 LVSNFWMAYMVGMWIFSFIVRFFDLQ-------R--ILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTII 316 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchh-------h--HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999865 2 22233333333344443444443333333333333334445555
Q ss_pred hhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 321 LNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
....+..|+++++..|..+...++|..++|.+.|++.|..| +...++...++.+++.++.....+
T Consensus 317 ~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 317 TLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHHHHH
Confidence 56667777777888899999999999999999999999988 778887777777777665554443
No 18
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=5.9e-37 Score=287.13 Aligned_cols=370 Identities=17% Similarity=0.117 Sum_probs=273.5
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|.+.+|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++.++ +++++.+++.|++
T Consensus 56 ~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~--~~s~~~l~~~r~l 133 (476)
T PLN00028 56 APLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSL--VSSATGFIAVRFF 133 (476)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH--hcCHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999888854 4899999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh---------hcCchhHHHHHHHHHHHHH
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---------TIGISGPFILFSSLGLLWL 152 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~---------~~gwr~~f~~~~~~~~~~~ 152 (391)
.|++.+.. +....+++|++|+++|++++++.....++|..+++.+.+.+.+ ..|||+.|++.+++.++..
T Consensus 134 ~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~ 212 (476)
T PLN00028 134 IGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMG 212 (476)
T ss_pred HHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHH
Confidence 99998865 4456788999999999999999988888888887776655432 2589999999999888777
Q ss_pred HHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhC
Q 016338 153 STWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 232 (391)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 232 (391)
+..++..++.|+++. ++.+ ++. +.++++....+++.++++++|...+..+..........++.|.|+.+.+|
T Consensus 213 l~~~~~~~~~p~~~~--~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 284 (476)
T PLN00028 213 ILVLTLGQDLPDGNY--RELK----KSG--TMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFG 284 (476)
T ss_pred HHHHHHcCcCCCCch--hhHH----hcC--ccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcC
Confidence 766666555443221 0100 000 00111112345677889999888887777777777788899999988889
Q ss_pred CCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhh
Q 016338 233 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 312 (391)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (391)
+++.+++.+.+...+++.+++++.|+++||+++|.... .|+........+.++....+...++........++.....
T Consensus 285 ~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~--~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~ 362 (476)
T PLN00028 285 LSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMR--GRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFV 362 (476)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcc--hhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998763211 1334444444444444444444444333333333333333
Q ss_pred hhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 313 SFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
....+.......+..|+++|+..|+.+..+++|+.++|.+.+ .+..++|...|.+.+++.+++.++.++.+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~ 434 (476)
T PLN00028 363 QAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTETGISLMGVMIIACTLPVAFIHF 434 (476)
T ss_pred HHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhhHHHHHHHHHHHHHHHHHheec
Confidence 333344555666778899999999998877777777777654 222345889999999888888888776653
No 19
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=3.7e-38 Score=288.36 Aligned_cols=356 Identities=19% Similarity=0.226 Sum_probs=270.5
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++..|.+.+++|.|.++.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++.+++ ++++.+++.|++
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 92 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS--TSLWVMAALWAL 92 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh--hhHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999998544 899999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHh-hHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGL-LLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~-~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
.|++.+...+...+++.|++|+|+|++++++.+....+|..+++ .+++.+.+..+||+.|++.+++.++..+..+...|
T Consensus 93 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (379)
T TIGR00881 93 NGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLR 172 (379)
T ss_pred HHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeC
Confidence 99999999999999999999999999999999999999999999 57777778889999999998888877777777777
Q ss_pred cCCCCCCCCChhHHHHHH--cCC--CcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc
Q 016338 161 NDPCNSPFVSKSELRLIQ--AGK--SDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 236 (391)
|+|++++..++++.+..+ +.. ++++.+..+...++.+|+|.++...+..+...........+.|.|+++.+|.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 252 (379)
T TIGR00881 173 DSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE 252 (379)
T ss_pred CCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 766543221111110000 000 0011111223456788999999999888888888889999999999998899999
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc--CCchhHHHHHHHHHHHhhhh
Q 016338 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSF 314 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 314 (391)
+.+.......++..+++++.+++.||..+++ +.................... ..+...........+.....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 326 (379)
T TIGR00881 253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGR------RGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYG 326 (379)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHcCCc------chHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999975441 222222222222222222222 12222222222222222222
Q ss_pred cccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHH
Q 016338 315 SQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAF 366 (391)
Q Consensus 315 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~ 366 (391)
..+.......|..| ++|+++.|+.+...++|+.++|.+.|.+.|+.| ++..
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~ 378 (379)
T TIGR00881 327 PQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WAGA 378 (379)
T ss_pred hhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-cccc
Confidence 22333455666666 899999999999999999999999999999987 6543
No 20
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=270.31 Aligned_cols=360 Identities=19% Similarity=0.237 Sum_probs=307.2
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhc-cchHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT-HSTASLLAVRA 80 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~r~ 80 (391)
+++.+.+.+|+|+|++|.+++.++..+...+..++.|.+.||+|.|++...+.++..+-.+..+++.. ++++++++.+.
T Consensus 34 s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl 113 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL 113 (417)
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 56778899999999999999999999999999999999999999999999999999999998876632 45569999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC---chhHHHHHHHHHHHHHHHHhh
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG---ISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~ 157 (391)
+.|++.+ .+......+++|||+|++|.++|+.. ..|+|..+...+++.+....+ ||....+..+..++..+..++
T Consensus 114 l~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 114 LLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred HHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999865 45889999999999999999999999 999999999999999999999 999999999999998888888
Q ss_pred ccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcch
Q 016338 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (391)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (391)
...|.|+.++..++.+. ..++.+.++|+.|.+.+.++..+..+.++..++|.|+++++|.++.+
T Consensus 192 ~~~d~p~~r~~~~~~~~----------------~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~ 255 (417)
T COG2223 192 GMNDVPEHRASVKPQLP----------------AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVT 255 (417)
T ss_pred HhCCChhhhccccccch----------------hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhh
Confidence 88888775322111110 25678889999999999999999999999999999999999999999
Q ss_pred hhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC-------CchhHHHHHHHHHHH
Q 016338 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-------KSPAVAAVLITIALS 310 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 310 (391)
++.+.......+.+.++++|+++||+|.+ | .+...+..+.++....... .+.......++....
T Consensus 256 Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-------r--v~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~ 326 (417)
T COG2223 256 AGLIAFLFPLIGALARPLGGWLSDRIGGR-------R--VTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFV 326 (417)
T ss_pred HHHHHHHHHHHHHHHHhccchhhhhccch-------h--HHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999965 3 3333444444444444332 233444444555666
Q ss_pred hhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 311 LSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
+.+..+...+..+...+|++.|.+.|+...++.+|++.-|...|...|..|++...|++...+.+++.+..+...+++
T Consensus 327 ~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 327 FAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 677788888999999999999999999999999999999999999999999999999999999999998776655443
No 21
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.2e-36 Score=282.52 Aligned_cols=357 Identities=17% Similarity=0.132 Sum_probs=251.9
Q ss_pred ccchhhHHHHhC---CChhhHHHHHHHH---HHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchH--
Q 016338 2 SVAVVPLAAKFG---WSSSFLGIVQSSF---LWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA-- 73 (391)
Q Consensus 2 ~~~~~~i~~~~~---~s~~~~g~~~s~~---~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~-- 73 (391)
+...|.+.+|++ .+..+.+...+.+ .++..+++++.|+++||+|||+++..+..++++++++++++ +++.
T Consensus 42 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~ 119 (432)
T PRK10406 42 SFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACL--PGYETI 119 (432)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhc--CCchhH
Confidence 456788899985 5555554544444 44555999999999999999999999999999999999554 7664
Q ss_pred ------HHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH--------hhcCchh
Q 016338 74 ------SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISG 139 (391)
Q Consensus 74 ------~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~--------~~~gwr~ 139 (391)
.+++.|+++|++.|...+...++++|++|+|+|+++.++.+.+...|..+++.+...+. +.+|||+
T Consensus 120 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~ 199 (432)
T PRK10406 120 GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRI 199 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 68899999999999999999999999999999999999999888888888887765543 2579999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHH-HHHHHHH
Q 016338 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANIT-NNWGYFV 218 (391)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 218 (391)
+|++.+++.++... .....||+|+++ .+. +++..++++++|+|+.+...+...+ ....++.
T Consensus 200 ~F~i~~~~~ll~~~-~~~~~~e~~~~~-------~~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 261 (432)
T PRK10406 200 PFALGAVLAVVALW-LRRQLDETSQQE-------TRA----------LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYT 261 (432)
T ss_pred HHHHHHHHHHHHHH-HHhcCCCCchHH-------Hhh----------hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99998777665433 233344443211 000 0012257888899888776665544 3667788
Q ss_pred HHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHH---HH-hhc
Q 016338 219 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSL---LC-LNY 294 (391)
Q Consensus 219 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~ 294 (391)
+.+|.|.|+++.+|.+..+.+.......+...+++++.|+++||++|| + .. ........+.. .. ...
T Consensus 262 ~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr-------~-~~-~~~~~~~~~~~~~~~~~~~~ 332 (432)
T PRK10406 262 FTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR-------T-SM-LCFGSLAALFTVPILSALQN 332 (432)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-------H-HH-HHHHHHHHHHHHHHHHHHHc
Confidence 889999999888899988888888888888888899999999999975 2 22 22222221111 11 111
Q ss_pred CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHH-HHHHHHHHhhHhhccccchhHHHHHHHH
Q 016338 295 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQWLGSFQAFLTVTAG 372 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~i~~~~~g~l~~~~g~~~~~~~~~~~ 372 (391)
.++.........+..+..+...+....+..|.+| +.|+++.|+.+..++. .+...|.+.+.+ +..|++...+...++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~ 411 (432)
T PRK10406 333 VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTL 411 (432)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHH
Confidence 2223322222222323333333445667788887 7999999999988775 345577777744 666767777777777
Q ss_pred HHHHHHHHHHHhccCc
Q 016338 373 LYFVTTIFWNLYSTGE 388 (391)
Q Consensus 373 ~~~~~~~~~~~~~~~~ 388 (391)
..+++.+..++.+++.
T Consensus 412 ~~~i~~~~~~~l~~~~ 427 (432)
T PRK10406 412 MAVVAFLVSLMLHRKG 427 (432)
T ss_pred HHHHHHHHHHHhhhcc
Confidence 7777766666555443
No 22
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=9e-37 Score=287.66 Aligned_cols=345 Identities=17% Similarity=0.125 Sum_probs=268.5
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
+..+|++.+|+|.|.++.+|+.+.+.+++..++++.|+++||+|||+++..+..+..++++++++ ++|++.++++|++
T Consensus 26 ~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~--a~~~~~li~~r~l 103 (495)
T PRK14995 26 HVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAF--SPTASWLIATRAL 103 (495)
T ss_pred HHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999955 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhc-CccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
+|+|.+...+.....+.+++ |+|+|++++++......+|..+||.+++.+.++.|||+.|++...+.++..++..+..|
T Consensus 104 ~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~ 183 (495)
T PRK14995 104 LAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVP 183 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999998888888887776 67899999999999999999999999999999999999999988888877777777777
Q ss_pred cCCCCCCCCChhHHH------------HHHcCCC-------------------------cccccCCCccHHHhhcCCchH
Q 016338 161 NDPCNSPFVSKSELR------------LIQAGKS-------------------------DSVKKRNPPSLRHLLSKLPSW 203 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~------------~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~ 203 (391)
|+++++++..+.... ..++... +.+.+++. -..+++|+|.++
T Consensus 184 ~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~-~~~~lf~~~~~~ 262 (495)
T PRK14995 184 RQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPM-IDMRLFTHRIIL 262 (495)
T ss_pred CCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC-cCHHHhCCcccH
Confidence 765433221110000 0000000 00111111 124788999998
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhH
Q 016338 204 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 283 (391)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 283 (391)
...+..++......+...+.|.|+++.+|+|+.+++....+..++..++.++.|++.||+++| ..+..+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~---------~~~~~g~~ 333 (495)
T PRK14995 263 SGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR---------LVATGGMA 333 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch---------HHHHHHHH
Confidence 888888888888888889999999999999999999999999999999999999999999954 34445555
Q ss_pred hhHHHHHHhh---cCCchhHHHHHHHHHHHhhhhcccchhhhhhh-ccccchhHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 016338 284 GPGVSLLCLN---YAKSPAVAAVLITIALSLSSFSQAGYLLNIQE-IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQ 358 (391)
Q Consensus 284 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 358 (391)
...++...+. ..++.+.......+.+...+...+.......+ .++++++.+.++.+..+++|+.+|+.+.|.+.+
T Consensus 334 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 334 LSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544443332 22233333333333333334444444444444 445899999999999999999999999998864
No 23
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.9e-36 Score=276.85 Aligned_cols=352 Identities=16% Similarity=0.080 Sum_probs=268.6
Q ss_pred cchhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHH-HHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 3 VAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAW-GVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 3 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
|.+|. +++++|.|+++.|++.+.+.+...+.+++.|+++||+||||.+.. +..+..++.+++ +.++|++.+++.|+
T Consensus 18 ~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~ 95 (375)
T TIGR00899 18 PTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF--AWNRNYFLLLVLGV 95 (375)
T ss_pred hHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH--HhcchHHHHHHHHH
Confidence 45565 578999999999999999999999999999999999999887654 555556666777 44599999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhH--HHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASA--IGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~--~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
+.|.+.+...|...++..|+.|+++|++. .+......++|..++|.+++.+.+..|||+.|++.++..++..+..++.
T Consensus 96 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~ 175 (375)
T TIGR00899 96 LLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLF 175 (375)
T ss_pred HHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888888888999999887777654 6788888999999999999999999999999999998887777776666
Q ss_pred cccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchh
Q 016338 159 VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (391)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 238 (391)
.||+|+++++.+ ...+.++.+++|+++......+...........+.|.|+++++|.++.+.
T Consensus 176 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 237 (375)
T TIGR00899 176 LPSYPRGAPGAL------------------TRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLA 237 (375)
T ss_pred CCCcccCccccc------------------CcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHH
Confidence 777654322110 01123446677877776666666555566667788999988899999999
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccc
Q 016338 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 318 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (391)
+...........++.++.|++.||+++| ..+..+.....+........++.+.......+.+...+...+.
T Consensus 238 g~~~~~~~~~~~~~~~~~g~l~~r~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 308 (375)
T TIGR00899 238 GLMMGTAAGLEIPFMLLAGYLIKRFGKR---------RLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGI 308 (375)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcch---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888777777888889999999999965 2233333333333333333334443333333333334444555
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 319 YLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
...+..|..|++++++.++.+...++|..++|.+.|.+.|..| ++..+.+.+++.+++.++....
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 309 GMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHhee
Confidence 6677788888888899999999999999999999999999988 8999999888888887776554
No 24
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=7.5e-36 Score=274.75 Aligned_cols=359 Identities=15% Similarity=0.132 Sum_probs=265.4
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhh-hh-ccchHHHHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AA-THSTASLLAVRAF 81 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-a~-~~~~~~~~~~r~l 81 (391)
.+|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+||||++..+..+.+++.+++.+ .. .++++.+++.|++
T Consensus 35 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 114 (402)
T TIGR00897 35 WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGI 114 (402)
T ss_pred hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHH
Confidence 456777899999999999999999999999999999999999999999999999888765421 22 3578888999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhH-HHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGN-VVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~-~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
.|++.+...+...+.+.|++|+|+|++++|+.+...++|. .++|.+++.+.+.+||+..++.......+..++..+..+
T Consensus 115 ~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 115 RGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999988878888889999999999999999999999997 689999999888889766655444333333333344444
Q ss_pred cCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhH
Q 016338 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 240 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 240 (391)
|.+++++++++++ .++..+++++++|+|+++...+..++.....+...++.|.|+++ +|+++.+.+.
T Consensus 195 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~ 261 (402)
T TIGR00897 195 DIFTPQHMQTREK------------FSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQ 261 (402)
T ss_pred CCCCcccccCCcc------------hhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHH
Confidence 4322111100000 00112246678999999988888888888888899999999977 8999999998
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHH---HHHhh--cCCchhHHHHHHHHHHHhhhhc
Q 016338 241 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS---LLCLN--YAKSPAVAAVLITIALSLSSFS 315 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 315 (391)
......+++.++++..|++.||+++| +.. ...+.+...+. +.... ..++.+......++.+...+..
T Consensus 262 ~~~~~~~~~~ig~~~~g~l~dr~~~~-------~~~-~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 333 (402)
T TIGR00897 262 IWGTFFFTNIVFNVIFGIVGDKLGWM-------NTV-RWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGY 333 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcch-------hHH-HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999865 222 12222222221 11111 1123333322222222222222
Q ss_pred ccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 316 QAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
.+ ......+..|++|+++.|+.+...++++.++|.+.|.+.|..| +...+++.+++.+++.++..+.|
T Consensus 334 ~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 334 VP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 3445567888999999999999999999999999999999988 88888888888888777766554
No 25
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5.8e-36 Score=282.01 Aligned_cols=368 Identities=17% Similarity=0.142 Sum_probs=251.3
Q ss_pred ccchhhHHHHhCCChhh-HHH-----HHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHH-
Q 016338 2 SVAVVPLAAKFGWSSSF-LGI-----VQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTAS- 74 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~-~g~-----~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~- 74 (391)
+...|.+.++++.+.++ .++ ..++..+++.+++++.|+++||+|||+++.++.+++++++++++++ +|++.
T Consensus 36 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~--~~~~~~ 113 (490)
T PRK10642 36 GFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLI--PSYATI 113 (490)
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhc--ccHHHH
Confidence 45678889998654322 122 2577889999999999999999999999999999999999999554 88864
Q ss_pred -------HHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH--------hhcCchh
Q 016338 75 -------LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISG 139 (391)
Q Consensus 75 -------~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~--------~~~gwr~ 139 (391)
+++.|+++|++.|...+...++++|++|+|+||++.++.+.+..+|..+++.+...+. +.+|||+
T Consensus 114 g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~ 193 (490)
T PRK10642 114 GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRI 193 (490)
T ss_pred HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHH
Confidence 8899999999999999999999999999999999999999998899888887665543 2579999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcC-CchHH-HHHHHHHHHHHHH
Q 016338 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSK-LPSWT-VIIANITNNWGYF 217 (391)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~ 217 (391)
.|++.+++.++ .+......||+|+..+..++.+ +...+...++++.++++++++ ++.+. .....++....++
T Consensus 194 ~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (490)
T PRK10642 194 PFFIALPLGII-GLYLRHALEETPAFQQHVDKLE-----QGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYY 267 (490)
T ss_pred HHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhh-----hhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99997765554 3334456677665321110000 000000011123356666653 23222 2233344566778
Q ss_pred HHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhH-HHH--HHhhc
Q 016338 218 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPG-VSL--LCLNY 294 (391)
Q Consensus 218 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~ 294 (391)
....|.|.|+++.+|++..+.+.......++..++.++.|+++||+||| ..+..+.+... ... +....
T Consensus 268 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr---------~~~~~~~~~~~~~~~~~~~~~~ 338 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR---------PFVILGSVALFVLAIPAFILIN 338 (490)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999887899988888777778888999999999999999965 23333332211 111 11222
Q ss_pred CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHH
Q 016338 295 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 373 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 373 (391)
.++........++.....+...........+..| +.|+++.|..+.....++.++|.+.+++.+..+++...+....+.
T Consensus 339 ~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~ 418 (490)
T PRK10642 339 SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVV 418 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHH
Confidence 2233333222222222223333444555667777 899999998777777888999999999988766455555555555
Q ss_pred HHHHHHHHHHhcc
Q 016338 374 YFVTTIFWNLYST 386 (391)
Q Consensus 374 ~~~~~~~~~~~~~ 386 (391)
.+++.+..++.+.
T Consensus 419 ~~i~~~~~~~~pe 431 (490)
T PRK10642 419 AVIGLITGVTMKE 431 (490)
T ss_pred HHHHHHHHHHhcc
Confidence 5555555555443
No 26
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2.1e-35 Score=272.49 Aligned_cols=340 Identities=12% Similarity=0.079 Sum_probs=264.3
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
.+.+|.+.+|+|.|+++.++..+.+.+++.+++++.|+++||+|||+++..+..+..++.++.++ +++++.+++.|++
T Consensus 33 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l 110 (406)
T PRK15402 33 QPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILL--AQSIEQFTLLRFL 110 (406)
T ss_pred hcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH--HccHHHHHHHHHH
Confidence 36788899999999999999999999999999999999999999999999999999999888844 4899999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+|++.+...+...+.+.|++|+++|.+..++......+|..++|.+++.+.++.+||+.|++.+++.++..+..++..||
T Consensus 111 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 190 (406)
T PRK15402 111 QGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPE 190 (406)
T ss_pred HHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999988889999999999999999999999998999999999999999998999999999888887776666556666
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
++++++++.+ . ++..++++++++||+++...+..++..........+.|.++++.+|.++.+.+..
T Consensus 191 ~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~ 256 (406)
T PRK15402 191 TAGRVGEKLS--L------------KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLL 256 (406)
T ss_pred CCcccccccc--H------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHH
Confidence 5432211100 0 0112246788999999988887777776666777788999888889999998888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc-----CCchhHHHHHHHHHHHhhhhcc
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY-----AKSPAVAAVLITIALSLSSFSQ 316 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 316 (391)
.....++..++.++.+++.||+++| ..+..+.+...++...... ..+.........+.....+...
T Consensus 257 ~~~~~~~~~~g~~~~g~l~~r~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 327 (406)
T PRK15402 257 QVPVFGALIAGNLTLARLTSRRPLR---------SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLAN 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHh
Confidence 7777788899999999999999864 3333444444333333221 1223333333333333333334
Q ss_pred cchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHH
Q 016338 317 AGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAF 366 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~ 366 (391)
+..........|+++|+..+..+....++..+++.+.+.+.+..+.+...
T Consensus 328 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 377 (406)
T PRK15402 328 AGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFN 377 (406)
T ss_pred hhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHH
Confidence 44444444455689999999999999999999999999999987744433
No 27
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=4.3e-36 Score=273.35 Aligned_cols=338 Identities=16% Similarity=0.124 Sum_probs=267.2
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhcc-----chHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH-----STASLLA 77 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~-----~~~~~~~ 77 (391)
+.+|.+.+|++.|+.+.+++.+.+.++..+++++.|+++||+|||+++..+..+..++.++.++. + +++.+++
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 97 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV--ALLGGLNIWQVYV 97 (365)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH--HHcCCCcHHHHHH
Confidence 56788899999999999999999999999999999999999999999999999988888877544 5 9999999
Q ss_pred HHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhh
Q 016338 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 157 (391)
.|++.|++.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+.+..|||+.|++.++..++..+..+.
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 177 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVS 177 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999887766665544443
Q ss_pred ccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHH-HhhHHHHHhhhCCCcc
Q 016338 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL-SWMPIYFNTVFNVNLK 236 (391)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~ 236 (391)
..+++++++++.+.+++ . .++..+.+++.+|+|.++...+..+.......... .+.|.|.++.+|.++.
T Consensus 178 ~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (365)
T TIGR00900 178 VRIPELAASEIQALSNA-V---------LRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGST 247 (365)
T ss_pred cccccCCCccccccchh-H---------HHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchH
Confidence 33222221111110100 0 00112246778899999888888887777777766 8889999887899999
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCc-hhHHHHHHHHHHHhhhhc
Q 016338 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS-PAVAAVLITIALSLSSFS 315 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 315 (391)
+.+.......++..++.++.+++.||.+++ .....+....++........++ .+...+..++.+...+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 318 (365)
T TIGR00900 248 HYGWVLAAFGLGALLGALLLGLLGRYFKRM---------ALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPI 318 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchh---------HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999854 3444445555555555544443 444444444444444555
Q ss_pred ccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 316 QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 316 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
.+.......|..| ++|+++.|+.+...+++..++|.+.|.+.|+.|
T Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 319 NVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6666777777666 899999999999999999999999999998764
No 28
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.2e-36 Score=281.36 Aligned_cols=377 Identities=19% Similarity=0.263 Sum_probs=272.3
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhh--ccchHHHHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--THSTASLLAVRAF 81 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~--~~~~~~~~~~r~l 81 (391)
..|.+++ +|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.++.++.. .++++.+.+.|++
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 127 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFL 127 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Confidence 4566665 699999999999999999999999999999999999999999999999888764331 2567788899999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH-hhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML-STIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
.|++.+...+.....+.|++|+|+|++++++.+...++|..+++.+.+... +..+||..|++.+++.++..+..++..|
T Consensus 128 ~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 128 NGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999988989999999999999999999999999999999988876544 4579999999999888887766677777
Q ss_pred cCCCCCCCCChhHHHH-HHcCCCcccccC--CCcc-HHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc
Q 016338 161 NDPCNSPFVSKSELRL-IQAGKSDSVKKR--NPPS-LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 236 (391)
|+|++++..+.++.+. .+++..++++++ .++. .+.++|+|.+|...+..++.+...+...++.|.|+++..|+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 287 (438)
T TIGR00712 208 DTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALD 287 (438)
T ss_pred CCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChh
Confidence 7665422111111000 000000000000 0111 23478899999988888888888888889999999998899999
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH-HhHhhHHHHHHhhc--CCchhHHHHHHHHHHHhhh
Q 016338 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI-GFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSS 313 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 313 (391)
++++...+..+.+++++++.|++.||++++ ++..... ......+....+.. ..+.+..... .+..+...
T Consensus 288 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 359 (438)
T TIGR00712 288 KSSWAYFLYEYAGIPGTLLCGWMSDKVFKG-------NRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMIC-MIVIGFLI 359 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccC-------cccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH-HHHHHHHH
Confidence 999999999999999999999999999654 2222111 11111111111111 1222222221 11111111
Q ss_pred hcc-cchhhhhhhccc-cchhHHHHHHHHHHHHHH-HHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCccc
Q 016338 314 FSQ-AGYLLNIQEIAP-DCAGFLHGIANSAGTLAA-IISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGERV 390 (391)
Q Consensus 314 ~~~-~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~-~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (391)
... ........|..| ++|+++.|+.+...+.++ .++|.+.|.+.|+.| +...+.+..+..+++.+..+...+++|+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 360 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 111 111234556666 799999999999988875 689999999999988 9999988888888888887777777663
No 29
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=2.2e-35 Score=270.80 Aligned_cols=332 Identities=17% Similarity=0.179 Sum_probs=260.8
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
.+..|.+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++.++ +++++.+++.|++
T Consensus 25 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 102 (385)
T TIGR00710 25 LPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL--SNNIETLLVLRFV 102 (385)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH--HccHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999998844 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+...+++.|++|+|+|++++++.+....+|..+++.+++.+.++.+||+.|.+.++..++..+..++..||
T Consensus 103 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (385)
T TIGR00710 103 QAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPE 182 (385)
T ss_pred HHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888887776666666666
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
+++++++.++++ ..++.++.+|+|+++...+..............+.|.++++.+|.++.+.+.+
T Consensus 183 ~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 247 (385)
T TIGR00710 183 TLPYEARIQIST---------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLL 247 (385)
T ss_pred CCCCcccCCHHH---------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHH
Confidence 544332211110 11245778899999988887777777788888899999998899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc---CC-chh-HHHHHHHHHHHhhhhcc
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY---AK-SPA-VAAVLITIALSLSSFSQ 316 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~-~~~~~~~~~~~~~~~~~ 316 (391)
.....++..+++++.+++.||+++| +.. ..+.....+....... .. +.. .......+.+...+...
T Consensus 248 ~~~~~~~~~~~~~~~g~l~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (385)
T TIGR00710 248 FALNIIAMIFGGFLNGRFIKKWGAK-------SLL--RMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMIS 318 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHH-------HHH--HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999865 222 2233333322222211 11 122 22222233333334444
Q ss_pred cchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 016338 317 AGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 359 (391)
+.......|..|++++++.++.+.....++.+.+.+.+.+.+.
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 319 SIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred HHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 5555666677788899999999999887666777677755444
No 30
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=2e-36 Score=282.20 Aligned_cols=368 Identities=16% Similarity=0.125 Sum_probs=274.4
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHH-HHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLA-VRA 80 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~r~ 80 (391)
+..+|++.+++|.|.++.+++.+.+.++..++.++.|+++||+|||++++.+.++..++.++++++ ++++.+++ .|+
T Consensus 39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~ 116 (455)
T TIGR00892 39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFS--SNVIELYLTAGF 116 (455)
T ss_pred hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHh--hhHHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999999999999999988554 88888865 579
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
++|++.+...+...+++.|+++ ++|+++.++.+.+..+|..++|++++.+.+.+|||+.|++.+++.++..+..++..+
T Consensus 117 l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 117 ITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999998877778888999996 889999999999999999999999999999999999999999887766555444444
Q ss_pred cCCCCCCCCChhHHHHHHcCCCcc----cccCCCcc--HHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCC
Q 016338 161 NDPCNSPFVSKSELRLIQAGKSDS----VKKRNPPS--LRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN 234 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 234 (391)
+.+.++...++++....++...++ ...+...+ ..+++++|+++......++..........++|.|.++ .|++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s 274 (455)
T TIGR00892 196 VGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVD 274 (455)
T ss_pred CCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCC
Confidence 322211100000000000000000 00000011 1257889999988888888888888888899999987 7999
Q ss_pred cchhhHHhhhHHHHHHHHHHHHHHHHHHHH--hhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhh
Q 016338 235 LKQAAWFSAVPWGTMAVSGYMAGKASDSLI--KAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 312 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (391)
+.+++.+.++.+++.++++++.+++.||.. ++ ++..+..+....++..+.....++.+...+..++.+...
T Consensus 275 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-------~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~ 347 (455)
T TIGR00892 275 EYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-------VQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSF 347 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-------HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999742 22 333333333333333333334444444444333333344
Q ss_pred hhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHH
Q 016338 313 SFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (391)
+...+.......|..| ++++++.|+.+...++|..++|.+.|.+.|..|++...|.+.++..+++.+.
T Consensus 348 g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 348 GSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred chHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHH
Confidence 4445555666666655 7899999999999999999999999999998876888888888777766553
No 31
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=7.7e-36 Score=277.40 Aligned_cols=346 Identities=15% Similarity=0.164 Sum_probs=250.6
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++..|.+++|+|+|+.+.+++.+.+.+++.+++++.|+++||+|||+++.++..+.+++.+++++ +++++.+++.|++
T Consensus 38 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l 115 (426)
T PRK12307 38 FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGL--ASGVIMLTLSRFI 115 (426)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999998854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+|++.+...+....++.|++|+|+|+++.++...+.++|.++++.+.+.+.+..+||+.|++.....++ .+......||
T Consensus 116 ~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~ 194 (426)
T PRK12307 116 VGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPE 194 (426)
T ss_pred HHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCC
Confidence 999999999999999999999999999999999999999999999999998889999999885433322 2221212233
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHH---HHHHHHHHHHHhhHHHHHhhhCCCcchh
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANI---TNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 238 (391)
+++.++ ++.+ .+++.+++..+....++++++|+|.++....... ...........++|.|+++ .|.++.+.
T Consensus 195 ~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 268 (426)
T PRK12307 195 SKEWEE----AKLS-GKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVV 268 (426)
T ss_pred ChHHHH----hhhh-ccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHH
Confidence 221100 0000 0000000011111235678888888765443322 2223334467789999988 69999999
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc-CCchhHHHHHHHHHHHhh-hhcc
Q 016338 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY-AKSPAVAAVLITIALSLS-SFSQ 316 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~ 316 (391)
+...+...++..+++++.|++.||+++| .....+.+...+....... ..+.........++.... ....
T Consensus 269 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (426)
T PRK12307 269 SNLMTAAAFGTVLGNIVWGLCADRIGLK---------KTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVG 339 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHh
Confidence 9998999999999999999999999864 3333444444333332222 222222222222222221 1122
Q ss_pred cchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHH
Q 016338 317 AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAF 366 (391)
Q Consensus 317 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~ 366 (391)
+.......|..| ++|+++.|+.+...++++.++|.+.|++.|+.| +...
T Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~~ 389 (426)
T PRK12307 340 GLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGAA 389 (426)
T ss_pred HHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHHH
Confidence 334455667777 789999999999999999999999999999988 5543
No 32
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.2e-36 Score=279.29 Aligned_cols=356 Identities=15% Similarity=0.156 Sum_probs=255.1
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++..|++++|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++++ +++++.+++.|++
T Consensus 32 ~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l 109 (405)
T TIGR00891 32 ALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGF--APGYITMFIARLV 109 (405)
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999998854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC--chhHHHHHHHHHHHHHHHHhhcc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG--ISGPFILFSSLGLLWLSTWTSKV 159 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~ 159 (391)
.|++.+...+...+++.|++|+|+|+++.++.+.+..+|..+++.+++.+.+..+ ||+.|.+.++..++.. ......
T Consensus 110 ~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~ 188 (405)
T TIGR00891 110 IGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNI 188 (405)
T ss_pred HHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhC
Confidence 9999999999999999999999999999999999999999999999999988776 9999988665554443 334445
Q ss_pred ccCCCCCCCCChhH--HHHHHcC-CCcccccCCC----ccHHHhhcCC--chHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 016338 160 TNDPCNSPFVSKSE--LRLIQAG-KSDSVKKRNP----PSLRHLLSKL--PSWTVIIANITNNWGYFVLLSWMPIYFNTV 230 (391)
Q Consensus 160 ~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (391)
||+++.+++.++++ .+..++. .+++..+... ...++..+++ .+...................+.|.|++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (405)
T TIGR00891 189 PEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD 268 (405)
T ss_pred CCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 66543221111100 0000000 0000000000 0111111111 122233333444455556678899999988
Q ss_pred hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHH-HHHHhhcCCchhHHHHHHHHHH
Q 016338 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV-SLLCLNYAKSPAVAAVLITIAL 309 (391)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 309 (391)
+|+++.+.+.+.+...++..+++++.+++.||+++| ..+..+...... ........++.+.......+..
T Consensus 269 ~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (405)
T TIGR00891 269 LGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR---------KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQ 339 (405)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch---------hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 999999999999999999999999999999999865 222333333222 2222222333333333323333
Q ss_pred Hhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHH
Q 016338 310 SLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTV 369 (391)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~ 369 (391)
.......+.......|..| ++|++++|+.+...+++..++|.+.|.+.|+.|+|+..+..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 3333334455566677766 89999999999999999999999999999998877766554
No 33
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=6.4e-35 Score=266.92 Aligned_cols=361 Identities=15% Similarity=0.154 Sum_probs=268.9
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
.|.+|.+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+..+.+++..++++ +++++.+++.|++
T Consensus 11 ~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~l 88 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL--AQTIDQLIYMRFL 88 (377)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH--HccHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+...+++.|++|+|+|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+...+..||
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999888887776666666666
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
+++++++.+.+. ++..+++++.+++|+++...+..++..........+.|.++.+.+|.++++.+..
T Consensus 169 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~ 235 (377)
T PRK11102 169 TLPKERRQPFHL-------------RTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYY 235 (377)
T ss_pred cCcccccCCCCh-------------HHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHH
Confidence 543322111100 0011245678889988887777777777777778888888888889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHh---hHHHHHHhhcCC-chhHHHHHHHHHHHhhhhccc
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG---PGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQA 317 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 317 (391)
.....++..+++++.+++.||+++| .....+... ..+........+ +.+.............+....
T Consensus 236 ~~~~~~~~~~~~~~~g~l~~r~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T PRK11102 236 FALNIVFLFVMTIINSRFVRRVGAL---------NMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISS 306 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHH---------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 9999999999999999999999965 222333322 222222222212 222222222222233333334
Q ss_pred chhhhhhhccccchhHHHHHHHHHHH-HHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCcc
Q 016338 318 GYLLNIQEIAPDCAGFLHGIANSAGT-LAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGER 389 (391)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~-~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
.......|..|++++++.++.+.... ++..+++.+.+. .+. + +...+...+++.+.+.+..++..|+++
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~-~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (377)
T PRK11102 307 NAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLA-PFT-S-AWPMVWSMAFCSILSILFYLYASRPKK 376 (377)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHhc-cCC-C-hHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 44455677778999999999887754 456666655432 222 2 334444555555566555565555544
No 34
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.8e-35 Score=268.79 Aligned_cols=354 Identities=15% Similarity=0.134 Sum_probs=270.2
Q ss_pred ccchhhHHH-HhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh---hccchHHHHH
Q 016338 2 SVAVVPLAA-KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA---ATHSTASLLA 77 (391)
Q Consensus 2 ~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a---~~~~~~~~~~ 77 (391)
+++.+.+.+ |+|+|.+|.+++.+++.+++.+.+++.|++.||+|+|+++.++.++.++..++.+++ ..++++.+++
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli 133 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV 133 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence 566777766 899999999999999999999999999999999999999999999999999988554 2379999999
Q ss_pred HHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH-----h-------------hcCchh
Q 016338 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML-----S-------------TIGISG 139 (391)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~-----~-------------~~gwr~ 139 (391)
.|++.|++ +..++.....+++|+|+|+||+++|+.....++|..+++.+.+.+. + ..+||.
T Consensus 134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~ 212 (462)
T PRK15034 134 IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN 212 (462)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHH
Confidence 99999998 6688999999999999999999999998777788877766665433 2 234788
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHH
Q 016338 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVL 219 (391)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (391)
...+..++.++..++.++..+|.++++. ..++.++.+|+|+.|..++.+++.+..+.++
T Consensus 213 ~~~~~~~~~iv~~i~~~~~~~~~~~~~~---------------------~~~~~~~vlk~~~~Wllslly~~tFG~fvg~ 271 (462)
T PRK15034 213 AAWIWVPLLAIATIAAWSGMNDIASSRA---------------------SIADQLPVLQRLHLWLLSLLYLATFGSFIGF 271 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccc---------------------CHHHHHHHhCCCchhHHHHHHHHHHHHHHHH
Confidence 8888888877777777766555442110 1124578999999999999999999999999
Q ss_pred HHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHH----HhhcC
Q 016338 220 LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL----CLNYA 295 (391)
Q Consensus 220 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 295 (391)
..++|.|.++.+ +............+...+.++++|+++||+|++ .++..+.+.+.+... .+...
T Consensus 272 s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~---------~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 272 SAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGV---------RVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch---------HHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999998854 333333333445677889999999999999964 333333333333221 11111
Q ss_pred --CchhHHHHHHHHHHHhhhhcccchhhhhhhcccc----------------------chhHHHHHHHHHHHHHHHHHHH
Q 016338 296 --KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPD----------------------CAGFLHGIANSAGTLAAIISTI 351 (391)
Q Consensus 296 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~g~~~~~~~~g~~i~~~ 351 (391)
.+.+.....++..+...+..+...+-.+.+.+|+ +.|.+.|+....+.+|+++-|.
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~ 420 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ 420 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 1223333333333444555666666566555553 6789999999999999999999
Q ss_pred HhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 352 GTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 352 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
+.|...+..|++...++...+.++++.++.+.+..|+
T Consensus 421 ~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 421 AFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999988877654443
No 35
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.5e-35 Score=284.66 Aligned_cols=370 Identities=13% Similarity=0.126 Sum_probs=275.3
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
+.++|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+.+++++++.+++.+++++ +++++.++++|++
T Consensus 187 s~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~af--a~s~~~llv~R~l 264 (742)
T TIGR01299 187 GFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSF--VQGYGFFLFCRLL 264 (742)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999998854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh-------------cCchhHHHHHHHHH
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-------------IGISGPFILFSSLG 148 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~-------------~gwr~~f~~~~~~~ 148 (391)
.|++.+...+...+++.|++|+++|++.+++...+..+|.++++.++..+... .+||+.+++.++..
T Consensus 265 ~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ 344 (742)
T TIGR01299 265 SGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPC 344 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888776543 35899888877665
Q ss_pred HHHHHHHhhccccCCCCCCCCChhH--HH-----------------------HHHcCCCcc-----cccCC---------
Q 016338 149 LLWLSTWTSKVTNDPCNSPFVSKSE--LR-----------------------LIQAGKSDS-----VKKRN--------- 189 (391)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------------------~~~~~~~~~-----~~~~~--------- 189 (391)
++. ++..+++||+|+......+.+ .+ ..+.....+ +++..
T Consensus 345 ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (742)
T TIGR01299 345 VFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVR 423 (742)
T ss_pred HHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhh
Confidence 544 455667899886421110000 00 000000000 00000
Q ss_pred --------CccHHHhhcCC---chHHHHHHHHHHHHHHHHHHHhhHHHHHhh----h-----------------CCCc--
Q 016338 190 --------PPSLRHLLSKL---PSWTVIIANITNNWGYFVLLSWMPIYFNTV----F-----------------NVNL-- 235 (391)
Q Consensus 190 --------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------g~~~-- 235 (391)
..+++++++.+ +.+.+.+.+++..+.++++..|+|.++++. + +++.
T Consensus 424 ~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (742)
T TIGR01299 424 ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLEN 503 (742)
T ss_pred hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhh
Confidence 01234444432 346677788888999999999999876541 0 0000
Q ss_pred --------------------------------------------------------------------------------
Q 016338 236 -------------------------------------------------------------------------------- 235 (391)
Q Consensus 236 -------------------------------------------------------------------------------- 235 (391)
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 583 (742)
T TIGR01299 504 QIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGC 583 (742)
T ss_pred hhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCcc
Confidence
Q ss_pred -----------chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHH
Q 016338 236 -----------KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVL 304 (391)
Q Consensus 236 -----------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (391)
........+..++.+++.++.|+++||+|| |.++..+.++.+++.+++...++....++.
T Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GR---------r~~l~~~~~lsai~~ll~~~~~s~~~ll~~ 654 (742)
T TIGR01299 584 PIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGR---------LRMLAGSMVLSCISCFFLSFGNSESAMIAL 654 (742)
T ss_pred CccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------HHHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 001233455668889999999999999995 455667777777777766666555554444
Q ss_pred HHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 016338 305 ITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
.++..++.....+....++.|..| +.|++++|+.+...++|++++|.+.+.+.+. + ...++.+.+++.+++.++...
T Consensus 655 ~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~-~~~pf~i~a~~lll~~ll~~~ 732 (742)
T TIGR01299 655 LCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-T-KAAPILFASAALACGGLLALK 732 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHHHHHh
Confidence 444444445556677888899888 8999999999999999999999999998875 3 566777777777777776665
Q ss_pred hc
Q 016338 384 YS 385 (391)
Q Consensus 384 ~~ 385 (391)
++
T Consensus 733 LP 734 (742)
T TIGR01299 733 LP 734 (742)
T ss_pred CC
Confidence 54
No 36
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.6e-34 Score=266.12 Aligned_cols=350 Identities=13% Similarity=0.066 Sum_probs=257.1
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
.|.+|.+.+++|.|.++.++..+++.+++.+++++.|+++||+|||+++..+.+++.++.+++++ ++|++.++++|++
T Consensus 36 ~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~--a~~~~~l~~~r~l 113 (413)
T PRK15403 36 QPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLF--TTSMTQFLIARFI 113 (413)
T ss_pred ccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHH--cCCHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999854 5999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.++.|||+.|++.++..++..+..++..||
T Consensus 114 ~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~ 193 (413)
T PRK15403 114 QGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPE 193 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998877777788899999999999999999999999999999999999998999999999998888776665556676
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
+++++++. .+. ++..+++++++|||+++...+...+.......+..+.|.++++.+|.++.+.++.
T Consensus 194 ~~~~~~~~-~~~-------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~ 259 (413)
T PRK15403 194 TVKRGAVP-FSA-------------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWT 259 (413)
T ss_pred CccccCCC-CCh-------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHH
Confidence 54322111 000 0012356788999999998888888888888888899999999889999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhh
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLL 321 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (391)
......+..++..+.+++.+|..+++... ........+.......... ..++.........+.....+...+....
T Consensus 260 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~--~~~~~~~ig~~l~~~~~~~--~~~~~~~~~~~~~l~~~G~~~~~p~~~~ 335 (413)
T PRK15403 260 QVPVFGAVIVANAIVARFVKDPTEPRFIW--RAVPIQLVGLALLIVGNLL--WPHVWLWSVLGTSLYAFGIGLIFPTLFR 335 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCchhHHH--HHHHHHHHHHHHHHHHHHH--ccccHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 87777777777777777654433221000 0001112222222111111 1222222222323233333333343333
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHH
Q 016338 322 NIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 373 (391)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 373 (391)
......+..+|++.++.+.....+...++...+++.++ + ....+....++
T Consensus 336 ~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~-~~~~~~~~~~~ 385 (413)
T PRK15403 336 FTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-G-GRLPFHLLAVV 385 (413)
T ss_pred HHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-C-CchHHHHHHHH
Confidence 22222234589999999999999999999999998887 3 34444444433
No 37
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.8e-36 Score=274.57 Aligned_cols=332 Identities=27% Similarity=0.402 Sum_probs=257.2
Q ss_pred ccchh-hHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 2 SVAVV-PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 2 ~~~~~-~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
.+.+| .+.+|+|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++..++ +|.+.+++.|+
T Consensus 16 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 93 (352)
T PF07690_consen 16 SPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--SNFWLLLIARF 93 (352)
T ss_dssp HHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH--CCHHHHHHHHH
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh--hhHHHHhhhcc
Confidence 35677 7899999999999999999999999999999999999999999999999999996666433 77789999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
+.|++.+...+...+++.|++|+|+|++++++.+...++|..++|.+++.+.+..+||+.|++.+++.++..++...+.+
T Consensus 94 l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~ 173 (352)
T PF07690_consen 94 LLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLP 173 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC-
T ss_pred ccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhh
Confidence 99999999999999999999999999999999999999999999999999998999999999999999888775445555
Q ss_pred cCCCCCCCCChhHHHHHHcCCCcccccCCCc-cHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCC-cchh
Q 016338 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPP-SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN-LKQA 238 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~ 238 (391)
+++++++..++++++ ++++++.. .++++.++|.+|......+...........+.|.|+++.+|.+ ..+.
T Consensus 174 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 245 (352)
T PF07690_consen 174 EPPPPRERESPKESE--------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQA 245 (352)
T ss_dssp --STTTT--SSTTTT----------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHH
T ss_pred hcccccccccccccc--------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHH
Confidence 544443332222210 00111222 3677888888886666666666788889999999988889999 7899
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH-HHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhccc
Q 016338 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ-SIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQA 317 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (391)
+.......+...+++++.+++.||++++ +.... ..........+......++.........+.+...+...+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 318 (352)
T PF07690_consen 246 GLLFSIFGIVGIIGSLLAGRLSDRFGRR-------RRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFP 318 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCH-------HHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999865 33322 222222222222222223334444444444445666677
Q ss_pred chhhhhhhccc-cchhHHHHHHHHHHHHHHHHHH
Q 016338 318 GYLLNIQEIAP-DCAGFLHGIANSAGTLAAIIST 350 (391)
Q Consensus 318 ~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~ 350 (391)
.......+..| ++++++.|+.+...++++.++|
T Consensus 319 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 319 ILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 78888888777 8999999999999999999987
No 38
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=1.9e-35 Score=279.46 Aligned_cols=347 Identities=15% Similarity=0.122 Sum_probs=269.8
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|.+.+|+|.|.++.+++.+.+.++..++.++.|+++||+|||+.+.++..+..++.+++++ ++|++.+++.|++
T Consensus 22 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~ 99 (485)
T TIGR00711 22 NVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV--APNLELMIIFRVI 99 (485)
T ss_pred HHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC--cCCHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999954 5999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+|++.+...+...+++.|++|+|+|++++++......+|..++|.+++++.++.+||+.|++.+.+.++..+...+..||
T Consensus 100 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~ 179 (485)
T TIGR00711 100 QGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPR 179 (485)
T ss_pred HHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999888887766666666666
Q ss_pred CCCCCCCCChhHH------------HHHHcCCCcc-------------------------cccCCCccHHHhhcCCchHH
Q 016338 162 DPCNSPFVSKSEL------------RLIQAGKSDS-------------------------VKKRNPPSLRHLLSKLPSWT 204 (391)
Q Consensus 162 ~~~~~~~~~~~~~------------~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~ 204 (391)
+++++++..+... ...++..+++ .+++++....+.+|+|+++.
T Consensus 180 ~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (485)
T TIGR00711 180 DKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTI 259 (485)
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHH
Confidence 4433221111000 0000000000 00111112246789999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHh
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 284 (391)
..+..++.....+....+.|.|+++.+|+++.+++.......++..++.++.|++.||+++| .....+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~~~~g~~~ 330 (485)
T TIGR00711 260 GCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR---------KLVTIGLIL 330 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH---------HHHHHHHHH
Confidence 88888888888888999999999998999999999999999999999999999999999854 344555555
Q ss_pred hHHHHHHhh--cCC--chhHHHHHHHHHHHhhhhcc-cchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 016338 285 PGVSLLCLN--YAK--SPAVAAVLITIALSLSSFSQ-AGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 285 ~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 359 (391)
..++...+. ..+ +.+.......+.+...+... +.......+.++++++++.|+.+..+.+|+.+++.+.+.+.++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 331 YAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555444 112 22223333333333333333 3333334445558999999999999999999999999998874
No 39
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1e-34 Score=267.42 Aligned_cols=351 Identities=18% Similarity=0.135 Sum_probs=255.8
Q ss_pred cchhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh-hc-----cchHHH
Q 016338 3 VAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-AT-----HSTASL 75 (391)
Q Consensus 3 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a-~~-----~~~~~~ 75 (391)
+.+|. +.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+.+.+. .. .+++.+
T Consensus 36 ~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (399)
T PRK05122 36 AVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLL 115 (399)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHH
Confidence 45665 678999999999999999999999999999999999999999999999888776665332 11 256788
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTW 155 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 155 (391)
++.|+++|++.+...+...+++.|+.|+|+|++++++.+....+|..+|+.+++.+.+..|||..+.+.++..++..+..
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 195 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA 195 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888766655433322
Q ss_pred hhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCc
Q 016338 156 TSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL 235 (391)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 235 (391)
...|+++++ + + + +.+.++.+| +.+.......+....+.....+.|.|+++ .|.
T Consensus 196 -~~~~~~~~~---~-~-~----------------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 248 (399)
T PRK05122 196 -RPRPAVPPV---K-G-E----------------RLPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW-- 248 (399)
T ss_pred -hcCCCCCCC---C-c-c----------------chhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--
Confidence 212221111 0 0 0 012233333 22222333334445566677888888876 465
Q ss_pred chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhc
Q 016338 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFS 315 (391)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (391)
.+.+.......++.+++++..+++.||+++| ..+..+.....+........++.+......++.+...+..
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~ 319 (399)
T PRK05122 249 DGAALALTLFGVAFVGARLLFGNLINRLGGL---------RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLV 319 (399)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHH
Confidence 3456666777888899999999999999854 3344444555555555444455444443333333333333
Q ss_pred ccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCccc
Q 016338 316 QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGERV 390 (391)
Q Consensus 316 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (391)
.+.......+..| ++|+++.|+.+...++|..++|.+.|.+.|+.| ++..+.+.+++.+++.+.....+++++|
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (399)
T PRK05122 320 FPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYRRAPR 394 (399)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 4444444445444 899999999999999999999999999999988 9999999888888888777766555543
No 40
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=2e-34 Score=263.61 Aligned_cols=347 Identities=13% Similarity=0.088 Sum_probs=256.7
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|.+.+|+|.|.+++|++.+.+.+++.+++++.|+++||+|||+.+..+..+.+++..++++ ++|++.+++.|++
T Consensus 26 ~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l 103 (381)
T PRK03633 26 NTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGL--MVGFWSWLAWRFV 103 (381)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999999999999999999998854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+|++.+...+...+.+.|..++++|+++++..+...++|..+|+.+++.+.+...|+..+.. +..........+. +.
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~--~~ 180 (381)
T PRK03633 104 AGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVT-GLVLAAILPLLFT--RI 180 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHH-HHHHHHHHHHHHh--cc
Confidence 99999998888888888999999999999999999999999999999998775444333332 2222211111111 11
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
+++++++ ++..+.++.+|+|.++......+.....+.....++|.|+++ .|.++.+.+..
T Consensus 181 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~ 240 (381)
T PRK03633 181 LNQQAEN-------------------HDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFW 240 (381)
T ss_pred cCCCCCC-------------------CCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 1111000 011245677888888866555555555666677889999987 69999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhh
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLL 321 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (391)
.+...++.+++++..|++.||+++| ..+..+.....++..... ..........+++.. .....+....
T Consensus 241 ~~~~~~~~~~~~~~~g~l~dr~~~~---------~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l~g~~-~~~~~p~~~~ 308 (381)
T PRK03633 241 MALLVSAGILGQWPIGRLADRFGRL---------LVLRVQVFVVILGSIAML--SQAAMAPALFILGAA-GFTLYPVAMA 308 (381)
T ss_pred HHHHHHHHHHHHhhhHHHHHHcCcH---------HHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHH-HHhHHHHHHH
Confidence 8888999999999999999999864 333334444444333322 112222222222222 2233455555
Q ss_pred hhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 322 NIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 322 ~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
...|..| ++++...+..+...++|..++|.+.|.+.|+.| +...|.+.+.+.++..+..+..+|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~~~~ 373 (381)
T PRK03633 309 WACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLLRKAG 373 (381)
T ss_pred HHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHhccC
Confidence 5556555 677888888888899999999999999999988 888888888887777665554433
No 41
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2e-34 Score=267.78 Aligned_cols=358 Identities=15% Similarity=0.120 Sum_probs=250.2
Q ss_pred HHHHh--CCChhhHHHHH-----HHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchH-------
Q 016338 8 LAAKF--GWSSSFLGIVQ-----SSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA------- 73 (391)
Q Consensus 8 i~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~------- 73 (391)
+.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++..+..++++++++++++ +|++
T Consensus 49 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 125 (438)
T PRK09952 49 FNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLL--PSFSTIGWWAP 125 (438)
T ss_pred HHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcC--CcHHHHHHHHH
Confidence 45555 66666 45554 34556778999999999999999999999999999999999554 8876
Q ss_pred -HHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh--------hcCchhHHHHH
Q 016338 74 -SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS--------TIGISGPFILF 144 (391)
Q Consensus 74 -~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~--------~~gwr~~f~~~ 144 (391)
.+++.|+++|++.|..++....++.|++|+|+|++..+..+.+..+|..++..+...+.. .+|||.+|++.
T Consensus 126 ~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~ 205 (438)
T PRK09952 126 VLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFS 205 (438)
T ss_pred HHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHH
Confidence 588899999999999999999999999999999999999999999999998877766542 57999999988
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHH-HHHHHHHHHHHHHHhh
Q 016338 145 SSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVII-ANITNNWGYFVLLSWM 223 (391)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 223 (391)
+++.++. +......||+|+..+. ++ +. + +++++....+.++|+|+.+.... ..++.....+....|.
T Consensus 206 ~~~~l~~-~~l~~~~~es~~~~~~-----~~---~~-~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (438)
T PRK09952 206 IVLVLIA-LWVRNGMEESAEFEQQ-----QH---EQ-A--AAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFA 273 (438)
T ss_pred HHHHHHH-HHHHHhCCCChhHHHH-----Hh---hc-c--cccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765443 2223334444421100 00 00 0 00111112334667777766544 4455566777788999
Q ss_pred HHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHH--hh-cCCc-hh
Q 016338 224 PIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLC--LN-YAKS-PA 299 (391)
Q Consensus 224 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~-~~ 299 (391)
|.|+++.+|++...........++...++.++.|+++||++|| + ....+.+...+.... .. ...+ ..
T Consensus 274 ~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (438)
T PRK09952 274 LNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-------R--VYITGALIGTLSAFPFFMALEAQSIFW 344 (438)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-------H--HHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 9999888898887655555566777888889999999999975 2 222333322222211 11 1222 22
Q ss_pred HHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHH-HHHHHHHHHhhHhhccc-cchhHHHHHHHHHHHH
Q 016338 300 VAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGT-LAAIISTIGTGYFVQWL-GSFQAFLTVTAGLYFV 376 (391)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~-~g~~i~~~~~g~l~~~~-g~~~~~~~~~~~~~~~ 376 (391)
......++.....+...+....+..|..| +.|+++.|+.+.... +++.++|.+.+++.|.. |+|...+....++.++
T Consensus 345 ~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i 424 (438)
T PRK09952 345 IVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLI 424 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 22223333333344445556778888888 899999999766654 79999999999999865 3477888888888888
Q ss_pred HHHHHHHhccCcc
Q 016338 377 TTIFWNLYSTGER 389 (391)
Q Consensus 377 ~~~~~~~~~~~~~ 389 (391)
+.+..+..++++|
T Consensus 425 ~~v~~~~~~~~~~ 437 (438)
T PRK09952 425 SAMTALLMKDNQR 437 (438)
T ss_pred HHHHHHHcccccc
Confidence 8777776655444
No 42
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=3.2e-34 Score=269.82 Aligned_cols=348 Identities=13% Similarity=0.103 Sum_probs=264.3
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|.+.+|+|.|+.+.+++.+.+.++..++.++.|+++||+|||+++..+..+.+++.+++++ +++++.+++.|++
T Consensus 30 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l 107 (471)
T PRK10504 30 NTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCAL--SGTLNELLLARVL 107 (471)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH--hCCHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999998888744 5899999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+|++.+...+...+++.|++|+++|+++.++.....++|..++|.+++.+.++.|||+.|.+......+..+......|+
T Consensus 108 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 108 QGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred HHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999887777666666555555
Q ss_pred CCCCCCCCChhHHHH-----------HHcCCC-------------------------cccccCCCccHHHhhcCCchHHH
Q 016338 162 DPCNSPFVSKSELRL-----------IQAGKS-------------------------DSVKKRNPPSLRHLLSKLPSWTV 205 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~-----------~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~ 205 (391)
.+.++++.+...... .++.+. +.+.+++..+ .+++|||+++..
T Consensus 188 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~ 266 (471)
T PRK10504 188 YTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFS-LKLFRTRTFSLG 266 (471)
T ss_pred ccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccC-HHHhcccchHHH
Confidence 443322211110000 000000 0011111222 358899999998
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhh
Q 016338 206 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 285 (391)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
....++..........+.|.|+++.+|.++.++++......++..++.++.+++.||+++| ..+..+....
T Consensus 267 l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~---------~~~~~~~~~~ 337 (471)
T PRK10504 267 LAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR---------RVLVATTLGL 337 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch---------HHHHHHHHHH
Confidence 8888888888777778899999987899999999999888888888889999999999854 3334444444
Q ss_pred HHHHHHhhcC--Cc-hhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 286 GVSLLCLNYA--KS-PAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 286 ~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
.+....+... .+ .+.......+.+...+...+.......+..| ++++.++|+.+....+|..+++.+.|.+.+..|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 338 ALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4433333222 12 2222222222223333334444455555555 899999999999999999999999999988776
No 43
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=2.5e-34 Score=266.19 Aligned_cols=356 Identities=13% Similarity=0.092 Sum_probs=264.4
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhh-hhccchHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AATHSTASLLAVRA 80 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-a~~~~~~~~~~~r~ 80 (391)
++..|++++++|+|+++.|+..+.+.+++.+++++.|+++||+|||+++..+..+++++.+++.. +.+++++.+++.|+
T Consensus 46 ~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~ 125 (438)
T PRK10133 46 DILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF 125 (438)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999987531 34689999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh------------------h--------
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS------------------T-------- 134 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~------------------~-------- 134 (391)
++|+|.+...+..+.++.|+.|+++|++.++..+....+|..+++.+++.+.. .
T Consensus 126 l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~ 205 (438)
T PRK10133 126 IIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLV 205 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHH
Confidence 99999999999999999998877777778999999999999999999876541 0
Q ss_pred cCchhHHHHHH-HHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHH
Q 016338 135 IGISGPFILFS-SLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNN 213 (391)
Q Consensus 135 ~gwr~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (391)
.+||++|+... +..++..+......||.+++++. + +++++..++.++++|+|.++...+..++..
T Consensus 206 ~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~---~-----------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~ 271 (438)
T PRK10133 206 LSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS---D-----------AKQGSFSASLSRLARIRHWRWAVLAQFCYV 271 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc---c-----------ccccchhhhHHHHHhCchHHHHHHHHHHHH
Confidence 25666776433 33333333323333332211100 0 001111234578899999988877778888
Q ss_pred HHHHHHHHhhHHHH-HhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHh
Q 016338 214 WGYFVLLSWMPIYF-NTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (391)
Q Consensus 214 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
..+.....|.+.|+ ++.+|+++.+++.......++..++++..+++.||+++| ..+..+..+....+...
T Consensus 272 ~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~---------~~l~~~~~~~~~~~~~~ 342 (438)
T PRK10133 272 GAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH---------KVLAAYALIAMALCLIS 342 (438)
T ss_pred HHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH---------HHHHHHHHHHHHHHHHH
Confidence 88888888999885 566899999999999999999999999999999999964 23333333333333333
Q ss_pred hcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHH
Q 016338 293 NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAG 372 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~ 372 (391)
...++.. ....+.+.+...+...|..++...+..|++.+++.++.. ....|+.++|++.|.+.|..|+.+..|++...
T Consensus 343 ~~~~~~~-~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~ 420 (438)
T PRK10133 343 AFAGGHV-GLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPAL 420 (438)
T ss_pred HHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 3333322 233444455556667777787777777877888888886 45578999999999999988645677766555
Q ss_pred HHHHHHHHHH
Q 016338 373 LYFVTTIFWN 382 (391)
Q Consensus 373 ~~~~~~~~~~ 382 (391)
+.+.......
T Consensus 421 ~~~~~~~~~~ 430 (438)
T PRK10133 421 CFAVIFIFAR 430 (438)
T ss_pred HHHHHHHHHH
Confidence 5555544433
No 44
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=2.2e-34 Score=264.30 Aligned_cols=351 Identities=15% Similarity=0.131 Sum_probs=262.1
Q ss_pred hHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhh
Q 016338 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAE 86 (391)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~ 86 (391)
.+++++|+|+.++|++.+...+...+.+++.|+++||+|||+++..+..+..++.+++++ +++++.+++.|+++|++.
T Consensus 36 ~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~~~ 113 (400)
T PRK11646 36 RFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAI--AHEPWLLWLSCILSGLGG 113 (400)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999998854 489999999999999999
Q ss_pred hchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCCCCC
Q 016338 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNS 166 (391)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (391)
+...+...+++.|++|+|+|++++++.+...++|..+||.+++.+. .+|||+.|++.++..++..+......||.++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 192 (400)
T PRK11646 114 TLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLST 192 (400)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 8888999999999999999999999999999999999999999998 689999999988877766555455555422110
Q ss_pred CCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHH
Q 016338 167 PFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPW 246 (391)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 246 (391)
. ++ +...++++.+++|+++...+..+...........+.|.|+++.. .++.+.+.+.+...
T Consensus 193 ~---~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~g~l~~~~~ 253 (400)
T PRK11646 193 V---RT---------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIA-GSPSAVKWMYAIEA 253 (400)
T ss_pred c---ch---------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhc-CCchHHHHHHHHHH
Confidence 0 00 01124677889998887666655555444455678899998854 47778888877777
Q ss_pred HHHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhh
Q 016338 247 GTMAVSGYMAGKASDS-LIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE 325 (391)
Q Consensus 247 ~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (391)
+....+....+++.|| .+.+ + .+..+....++....+...++.+.......+.........+.......+
T Consensus 254 ~~~~~~~~~~~~~~~~r~~~~-------~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~ 324 (400)
T PRK11646 254 CLSLTLLYPIARWSEKRFRLE-------H--RLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSAS 324 (400)
T ss_pred HHHHHHHHHHHHHHHHhcchh-------H--HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHh
Confidence 7666666555666654 3322 2 2334444555555555444544443333333333334455666677777
Q ss_pred ccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccc---hhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 326 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS---FQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 326 ~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
..| ++||+++|+.+....+|..++|.+.|.+.|+.++ ....+...+...+++.+......|++
T Consensus 325 ~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (400)
T PRK11646 325 LADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALYWQFSQK 391 (400)
T ss_pred cCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 666 8999999999999999999999999999998542 45666666666666665555444443
No 45
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.7e-34 Score=272.44 Aligned_cols=373 Identities=17% Similarity=0.193 Sum_probs=250.2
Q ss_pred ccchhhHHHHh--------CCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhh-----
Q 016338 2 SVAVVPLAAKF--------GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA----- 68 (391)
Q Consensus 2 ~~~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~----- 68 (391)
++..|.+++++ +.++++.+++.+++.++..++++++|+++||+|||+++.++..+..++.++++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~ 111 (479)
T PRK10077 32 SGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS 111 (479)
T ss_pred hHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 45567777777 88999999999999999999999999999999999999999999998888775420
Q ss_pred -----ccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH--------hhc
Q 016338 69 -----THSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STI 135 (391)
Q Consensus 69 -----~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~--------~~~ 135 (391)
.++++.+++.|+++|++.|...+...++++|++|+|+|++++++.+.+..+|..+++.++..+. +..
T Consensus 112 ~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 191 (479)
T PRK10077 112 IGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTD 191 (479)
T ss_pred ccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccC
Confidence 1235678899999999999999999999999999999999999999999999999988776553 356
Q ss_pred CchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCC-hhHH-HHHHcCCCcccccCCCccHHHhhc-----CCchHH----
Q 016338 136 GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS-KSEL-RLIQAGKSDSVKKRNPPSLRHLLS-----KLPSWT---- 204 (391)
Q Consensus 136 gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---- 204 (391)
|||+.|++.++..++..+. .++.||+|++...++ +++. +..++....++.++...+.++.++ .+..+.
T Consensus 192 gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (479)
T PRK10077 192 GWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVG 270 (479)
T ss_pred ChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHH
Confidence 9999999988877776544 456788775321111 1111 111110000000000011111111 111110
Q ss_pred -H----HHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 205 -V----IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 205 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
. ....+...........+.|.+.++ .|.+...........++...++.++.+++.||+++| ..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r---------~~~i 340 (479)
T PRK10077 271 VIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK---------PLQI 340 (479)
T ss_pred HHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh---------HHHH
Confidence 0 011111122233444566777666 788887777777778888999999999999999954 4445
Q ss_pred HHhHhhHHHHHHhhc---CCchh-HHHH-HHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 016338 280 IGFIGPGVSLLCLNY---AKSPA-VAAV-LITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT 353 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~---~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~ 353 (391)
.+..+..++...+.. .+... .... ......+......+.......|..| ++|+++.|+.+...+++..+++.+.
T Consensus 341 ~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~ 420 (479)
T PRK10077 341 IGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTF 420 (479)
T ss_pred HhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555555554444321 12221 1111 2222222222234566788888877 8999999999999999999998777
Q ss_pred hHhh------ccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 354 GYFV------QWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 354 g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
+.+. |..+ +...+.+.++..+++.++.+.+.+
T Consensus 421 p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 421 PMMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred HHHHhccchhhhcc-CccHHHHHHHHHHHHHHHHHhccc
Confidence 6554 4566 566677777666666665554443
No 46
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=7.2e-34 Score=261.96 Aligned_cols=335 Identities=15% Similarity=0.138 Sum_probs=256.4
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
.|.+|++++|+|.|+++.++..+++.++..++++++|+++||+|||+.+..+..+..++.+++. .+++++.+++.|++
T Consensus 26 ~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~l 103 (401)
T PRK11043 26 LPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGML--WVESAAQLLVLRFV 103 (401)
T ss_pred HhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHH--HhcCHHHHHHHHHH
Confidence 3667889999999999999999999999999999999999999999999999999999988884 45999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+..|||+.|++.++..++..+..+...|+
T Consensus 104 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 104 QAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99998888888889999999999999999999999999999999999999999999999999888887766655544333
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
++++ ++ ++ ++.++++.+|+|+++...+........+.....+.|.++++ .|+++.+.+..
T Consensus 184 ~~~~-~~--~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~ 243 (401)
T PRK11043 184 KKAR-KQ--SQ----------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLS 243 (401)
T ss_pred CCcc-cc--ch----------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHH
Confidence 2211 10 00 11256788889988876666666666677778889998877 79999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHhHhhHHHHHHhh--cCCchhHHHHHHHHHHHhhhhcccc
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI-MQSIGFIGPGVSLLCLN--YAKSPAVAAVLITIALSLSSFSQAG 318 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (391)
.....++..++++..+++.||+++| +.. ................. ..++.........+.....+...+.
T Consensus 244 ~~~~~~~~~~g~~~~~~l~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (401)
T PRK11043 244 YVPQTIAFLVGGYGCRAALQKWGGE-------QLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPI 316 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHH-------HHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHH
Confidence 8887888899999999999999865 211 11112222222222221 1223333333333333444444555
Q ss_pred hhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHH
Q 016338 319 YLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAF 366 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~ 366 (391)
......+..|++++++.|+.+.....++..++.+.|.+.|... ....
T Consensus 317 ~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~-~~~~ 363 (401)
T PRK11043 317 VVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALISTPL-LTTG 363 (401)
T ss_pred HHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCCCh-hHHH
Confidence 5555556668889999999999999999999999999988643 4443
No 47
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=2.3e-34 Score=260.89 Aligned_cols=331 Identities=16% Similarity=0.140 Sum_probs=251.1
Q ss_pred CccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
+++.+|.+++|+|.|+++.+++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+.+ . +++.+.+++.|+
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~--~~~~~~l~~~~~ 95 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S--APGTALLFAGTA 95 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H--hccHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999999999999998888877765 3 388899999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc--CchhHHHHHHHHHHHHHHHHhhc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI--GISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
+.|++.+...+.....+.|++| ++|++++++.+...++|..+++.+++.+.+.. +||+.|...++..++.... .
T Consensus 96 ~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~---~ 171 (355)
T TIGR00896 96 LIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA---W 171 (355)
T ss_pred HHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH---H
Confidence 9999999888888889999996 78999999999999999999999998887765 3999988877655443222 2
Q ss_pred cccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchh
Q 016338 159 VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (391)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 238 (391)
.|+.++++++++ +......++.+|+|.++...+..++....+.....++|.|+++ .|.++.+.
T Consensus 172 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~ 234 (355)
T TIGR00896 172 IPQVRRRVAANQ----------------TTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATA 234 (355)
T ss_pred hhhhccccCCCC----------------CCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHH
Confidence 233322111000 0011234567889998887777777778888888999999987 69999999
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccc
Q 016338 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 318 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (391)
+...+...++.+++++..|++.||+++| | ..+..+.....++.......++........+.+ ...+...+.
T Consensus 235 g~~~~~~~~~~i~~~~~~g~l~dr~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g-~~~g~~~~~ 305 (355)
T TIGR00896 235 GSLLALMQLAQAASALLIPALARRVKDQ-------R-GIVAVLAVLQLVGLCGLLFAPMHGLWAWALVLG-LGQGGAFPL 305 (355)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhccc-------h-HHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HhhhhHhHH
Confidence 9999999999999999999999999653 2 333344444444444333333222222222333 333333344
Q ss_pred hhhhhh-hccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchh
Q 016338 319 YLLNIQ-EIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQ 364 (391)
Q Consensus 319 ~~~~~~-~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~ 364 (391)
...... +..+ ++++...++.+..++++..++|.+.|.+.|+.|+|.
T Consensus 306 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 306 ALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 333333 3443 677999999999999999999999999999988664
No 48
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=5.1e-34 Score=262.15 Aligned_cols=347 Identities=16% Similarity=0.155 Sum_probs=248.2
Q ss_pred cchhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhh---hh---hccchHHH
Q 016338 3 VAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTP---WA---ATHSTASL 75 (391)
Q Consensus 3 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~---~a---~~~~~~~~ 75 (391)
|.+|. +.+|+|.|++++|++.+.+.+++.+++++.|+++||+||||++..+.+...++.+... .. ..++++.+
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 115 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALL 115 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHH
Confidence 45664 6789999999999999999999999999999999999999999999887776654321 11 13578999
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTW 155 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 155 (391)
++.|+++|++.+...+...+++.|++|+|+|++++++.+.+.+.|..++|++++.+.+..|||..+.+..+..++....
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~- 194 (392)
T PRK12382 116 VVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF- 194 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-
Confidence 9999999999998888899999999999999999999999999999999999999999999998877655544333222
Q ss_pred hhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCc
Q 016338 156 TSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL 235 (391)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 235 (391)
....||.+++++ + +.+.++..| .++...+...+..........+.|.|+++ .|.+
T Consensus 195 ~~~~~~~~~~~~---~------------------~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~- 249 (392)
T PRK12382 195 NGTVRKVPAHAG---E------------------RPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA- 249 (392)
T ss_pred HHhccCCCCCcc---c------------------CchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc-
Confidence 111222111100 0 001122221 12222222333344555667888888877 4655
Q ss_pred chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhc
Q 016338 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFS 315 (391)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (391)
+.+.......++..++++..|++.||+++|+ .+..+.....+........++.+.......+.+...+..
T Consensus 250 -~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 319 (392)
T PRK12382 250 -MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK---------VAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLI 319 (392)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe---------ehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhH
Confidence 3455566677788899999999999999652 223344444444444444444444443333333333334
Q ss_pred ccchhhhhhhcc-ccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 316 QAGYLLNIQEIA-PDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 316 ~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
.+.......+.. |++|+++.|+.+...++|..++|.+.|.+.|+.| ++..+.+.+.+.+++.+..+...|
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 320 FPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTILSFR 390 (392)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHhhcc
Confidence 444445545544 4899999999999999999999999999999988 999999999888888877765544
No 49
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.6e-34 Score=266.16 Aligned_cols=357 Identities=14% Similarity=0.099 Sum_probs=267.2
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhh---hhccchHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW---AATHSTASLLAV 78 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~---a~~~~~~~~~~~ 78 (391)
.+.+|.+.+|++.|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+..+. ..+++++.+++.
T Consensus 37 ~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 116 (417)
T PRK10489 37 GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLL 116 (417)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHH
Confidence 35678888999999999999999999999999999999999999999999988887777665432 224788999999
Q ss_pred HHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
|+++|++.+...+...+++.|+.|+++|+++.++.+...++|..+||.+++.+.+..+||+.|.+.++..++..+... .
T Consensus 117 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ 195 (417)
T PRK10489 117 GLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-R 195 (417)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-h
Confidence 999999998888889999999999999999999999999999999999999999989999999988777666555443 4
Q ss_pred cccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchh
Q 016338 159 VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (391)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 238 (391)
.||+++++++.++ +. ++..+.++..+++|.++...+..++... ......+.|.|.++.+|.++.+.
T Consensus 196 l~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~ 261 (417)
T PRK10489 196 LPALPPPPQPREH-PL------------RSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQI 261 (417)
T ss_pred CCCCCCCCccccc-ch------------HHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHh
Confidence 4554332211100 00 0011235667788877665555444332 45677889999999889999999
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccc
Q 016338 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 318 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (391)
+.+.+...++..++.++.+++.||.++ +..+..+.....+....+...++........++.+...+...+.
T Consensus 262 g~~~~~~~~g~~ig~~~~~~l~~~~~~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 332 (417)
T PRK10489 262 GLLYAAVPLGAALGALTSGWLAHSARP---------GLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLL 332 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCc---------chHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998543 23344455555555555555555444333333333334444455
Q ss_pred hhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHH-HHHHHHH
Q 016338 319 YLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFV-TTIFWNL 383 (391)
Q Consensus 319 ~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~-~~~~~~~ 383 (391)
.....++..| +.|++++|+.+...++|..++|.+.|.+.|..| +...+...+.+..+ +.+....
T Consensus 333 ~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 333 QYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHh
Confidence 5667777777 789999999999999999999999999999988 55555555544444 4444443
No 50
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.1e-34 Score=273.49 Aligned_cols=362 Identities=16% Similarity=0.125 Sum_probs=263.0
Q ss_pred cchhhHHHHhCCC---hhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHH
Q 016338 3 VAVVPLAAKFGWS---SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVR 79 (391)
Q Consensus 3 ~~~~~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r 79 (391)
+..|.+.+|+|++ +.+.++..+++.++..+++++.|+++||+|||+++.++.++..++.++.+ +++|++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTA--FSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHH--HcccHHHHHHHH
Confidence 5678899999999 89999999999999999999999999999999999999999999999884 459999999999
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcc
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 159 (391)
++.|++.+...+....++.|++|+++|+++.++.+.+..+|.++++.++..+.+ ||+.+++.+++.++..+.. ++.
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999988876654 9999999998877766655 567
Q ss_pred ccCCCCCCCCC--hhHHHHH----H-cC------------CCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHH
Q 016338 160 TNDPCNSPFVS--KSELRLI----Q-AG------------KSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL 220 (391)
Q Consensus 160 ~~~~~~~~~~~--~~~~~~~----~-~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (391)
||+|+....+. ++..+.. + ++ .++.++++++.+.++++|+|+++...+......+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 88775321111 1100000 0 00 0000111223477889999988877666655544443333
Q ss_pred HhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCch--
Q 016338 221 SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP-- 298 (391)
Q Consensus 221 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (391)
...+.+..+ .+.+.. ......++..+++.++.+++.||+||| ..+..+.+..+++.+.+...++.
T Consensus 344 ~~~~~~~~~-~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr---------~~~~~~~~~~~~~~l~~~~~~~~~~ 410 (505)
T TIGR00898 344 YGLVLDLGN-LGGNIY---LDLFISGLVELPAKLITLLLIDRLGRR---------YTMAASLLLAGVALLLLLFVPVDLY 410 (505)
T ss_pred HHHhccccc-cCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCH---------HHHHHHHHHHHHHHHHHHHcCCCch
Confidence 333333333 454432 333445667888999999999999954 44455555555555544443332
Q ss_pred hHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHH
Q 016338 299 AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVT 377 (391)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 377 (391)
+......++..+......+..+.+..|..| +.|+++.|+.+....+|++++|.+.+ +. ..+ ....+.+.++..+++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~-~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 411 FLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKW-LFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHH-HhhHHHHHHHHHHHH
Confidence 333344444444445555667788889888 78999999999999999999999999 43 344 556666677666666
Q ss_pred HHHHHHhcc
Q 016338 378 TIFWNLYST 386 (391)
Q Consensus 378 ~~~~~~~~~ 386 (391)
.+...+++.
T Consensus 488 ~~~~~~lpe 496 (505)
T TIGR00898 488 GILTLFLPE 496 (505)
T ss_pred HHHHHcCcC
Confidence 666555543
No 51
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=1.3e-34 Score=263.93 Aligned_cols=330 Identities=21% Similarity=0.262 Sum_probs=248.7
Q ss_pred ccchhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhcc-chHHHHHHH
Q 016338 2 SVAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH-STASLLAVR 79 (391)
Q Consensus 2 ~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~~r 79 (391)
++.+|. +++++|+|+.+.+++.+.+.+++.+++++.|+++||+|||+.+.++.++..++.++++++ + +++.+++.|
T Consensus 21 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~ 98 (366)
T TIGR00886 21 SPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLA--VQSYSVLLLLR 98 (366)
T ss_pred HHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHH
Confidence 567885 999999999999999999999999999999999999999999999999999999998554 8 999999999
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh----------hcCchhHH-HHHHHHH
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS----------TIGISGPF-ILFSSLG 148 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~----------~~gwr~~f-~~~~~~~ 148 (391)
+++|++.+. .+...+++.|++|+|+|++++++.....++|..+++.+++.+.+ ..+||+.| ...+++.
T Consensus 99 ~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 177 (366)
T TIGR00886 99 LFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGIL 177 (366)
T ss_pred HHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHH
Confidence 999999664 46678999999999999999999998888998888888877665 24899999 4446555
Q ss_pred HHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 016338 149 LLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFN 228 (391)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (391)
.+..++.....+|+|++++++++.+. ++ ...+.+++..++.++.+++|+++...+..++..........+.|.|++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (366)
T TIGR00886 178 LLPALLIFFVGADTPPGKPATGKLSF---KG-ARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFK 253 (366)
T ss_pred HHHHHHHHHhcccCCcccccchhccc---cc-ccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555665543221111100 00 000011111225677889999998888888888888888999999999
Q ss_pred hhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC--chhHHHHHHH
Q 016338 229 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLIT 306 (391)
Q Consensus 229 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 306 (391)
+.+|.++.+++.+.....+.+.+++++.|++.||+++| +...............+.....+ +.........
T Consensus 254 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (366)
T TIGR00886 254 DQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-------RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFV 326 (366)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-------hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHH
Confidence 98999999999998888999999999999999999976 43333333333333333333332 3333333444
Q ss_pred HHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHH
Q 016338 307 IALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLA 345 (391)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g 345 (391)
......+...........+..|+++|+++|+.+..+++|
T Consensus 327 ~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 327 ALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 444445555666777778888999999999999988876
No 52
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=6.9e-34 Score=262.88 Aligned_cols=356 Identities=15% Similarity=0.133 Sum_probs=264.5
Q ss_pred ccchhhHHHHhCCChhh-----HHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHH
Q 016338 2 SVAVVPLAAKFGWSSSF-----LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLL 76 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 76 (391)
.+.+|.+.+|+|.+..+ .|++.+++.++..+++++.|+++||+|||+.+..+..+..++.++++ .+++++.++
T Consensus 34 ~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 111 (408)
T PRK09874 34 MPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMG--LAQNIWQFL 111 (408)
T ss_pred hhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHH--HHhhHHHHH
Confidence 46789999999998654 48999999999999999999999999999999999999999888874 458999999
Q ss_pred HHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
+.|++.|++.+ ..+....++.|+.|+++|+++.++......+|..++|.+++.+.+..+||+.|.+.+++.++..+...
T Consensus 112 ~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (408)
T PRK09874 112 ILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTL 190 (408)
T ss_pred HHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 45778889999999999999999999999999999999999999999999999999888877766666
Q ss_pred hccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHH-HHHHHHHHHHHHHHHhhHHHHHhhhCCCc
Q 016338 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVI-IANITNNWGYFVLLSWMPIYFNTVFNVNL 235 (391)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 235 (391)
+..||+++++++.++.+ .++..+.+++|+++... ...............+.|.|.++..+...
T Consensus 191 ~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (408)
T PRK09874 191 FCIRENFQPVSKKEMLH----------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVS 254 (408)
T ss_pred HHhccCcccccchhhhH----------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 66666543221110000 01234456777765533 33344444555566778888887433222
Q ss_pred c---hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhh
Q 016338 236 K---QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 312 (391)
Q Consensus 236 ~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (391)
. ..+.+.....++..++.+..|++.||+++| ..+..+.....+........++.+.......+.+...
T Consensus 255 ~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 325 (408)
T PRK09874 255 NIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE---------KILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAAD 325 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---------hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 1 235555666778888899999999999864 3333444444444444444444444444434444444
Q ss_pred hhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 313 SFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
+...+.......+..| +++++.++..+....+|..++|.+.|.+.|..| ++..|...+++.+++.+......+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 326 GALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555 789999999999999999999999999999988 999999998888888776655433
No 53
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.8e-33 Score=258.52 Aligned_cols=336 Identities=16% Similarity=0.148 Sum_probs=248.5
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
+.+|.+.+|+|.|+++.++..+.+.++..+++++.|+++||+|||+.+..+..+..++..++.+ +++++.+++.|+++
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~--~~~~~~~~~~~~l~ 101 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSL--AETSSLFLAGRFLQ 101 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHH--hCcHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999988844 48999999999999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccC
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
|++.+...+...+++.|++|+|+|+++.++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+......||+
T Consensus 102 g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 181 (392)
T PRK10473 102 GIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKET 181 (392)
T ss_pred HhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999988999999999999999999999999999999999999999988889999999999888887777666666665
Q ss_pred CCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHh
Q 016338 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (391)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (391)
++++++.++ +..+..++.+|+|+++...+...+.......+..+.|.++++.+|+++.+.+...
T Consensus 182 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 245 (392)
T PRK10473 182 RPARAPAAS----------------SKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIM 245 (392)
T ss_pred CCcccCCcc----------------chHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHH
Confidence 433211100 0112345677888877766655555555556667788888888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHH-HHHHHHhhhhcccchhh
Q 016338 243 AVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVL-ITIALSLSSFSQAGYLL 321 (391)
Q Consensus 243 ~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 321 (391)
....+..++++++.+++.||+++| .....+.....+........++....... .....+... ..+ ..
T Consensus 246 ~~~~~~~i~~~~~~~~l~~r~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~--~~ 313 (392)
T PRK10473 246 ALTAGVSMTVSFSTPFALGIFKPR---------TLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSV-GFG--VA 313 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhH--HH
Confidence 999999999999999999999864 33444444444444443333333222222 222222211 111 12
Q ss_pred hhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHH
Q 016338 322 NIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAG 372 (391)
Q Consensus 322 ~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~ 372 (391)
...+..| ++|+ |.......++..+++.+.+.+.+..| +.......+.
T Consensus 314 ~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g-~~~~~~~~~~ 361 (392)
T PRK10473 314 MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG-ISAWNMLIGI 361 (392)
T ss_pred HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHH
Confidence 3334444 3332 44445556777888888888888777 4443333333
No 54
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.2e-34 Score=273.39 Aligned_cols=373 Identities=19% Similarity=0.178 Sum_probs=261.6
Q ss_pred ccchhhHHHHhCCC--------hhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh-hccch
Q 016338 2 SVAVVPLAAKFGWS--------SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-ATHST 72 (391)
Q Consensus 2 ~~~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a-~~~~~ 72 (391)
++.+|.+.++++.+ ..+.+++.+++.++..+++++.|+++||+|||+++.++.++..++.+++.+. ...++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV 127 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 45677788888777 8999999999999999999999999999999999999999999999888443 22456
Q ss_pred HHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHH---HHHHhhcCchhHHHHHHHHHH
Q 016338 73 ASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT---PIMLSTIGISGPFILFSSLGL 149 (391)
Q Consensus 73 ~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~---~~l~~~~gwr~~f~~~~~~~~ 149 (391)
+.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..+++.++ ....+..+||+.|.+.++..+
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~ 207 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAG 207 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999998 666677899999999665555
Q ss_pred HHHHHHhhccccCCCCCC--CCChhHHHHHHc---CCCcc----------------cccCCCccHHHhhcC------Cch
Q 016338 150 LWLSTWTSKVTNDPCNSP--FVSKSELRLIQA---GKSDS----------------VKKRNPPSLRHLLSK------LPS 202 (391)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~----------------~~~~~~~~~~~~~~~------~~~ 202 (391)
+.. ...++.||+|+... +..++..+..++ ..+++ +.+.....+++.++. +.+
T Consensus 208 ~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (481)
T TIGR00879 208 LLF-LGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLF 286 (481)
T ss_pred HHH-HHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHH
Confidence 444 34455677653211 111111111000 00000 000001112233332 222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHh
Q 016338 203 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGF 282 (391)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 282 (391)
+...+..+...........+.|.+.++ .|++..+.+.......++..++.++.+++.||+++| .....+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---------~~~~~~~ 356 (481)
T TIGR00879 287 LGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR---------PLLLIGA 356 (481)
T ss_pred HHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch---------HHHHHHH
Confidence 233333333333344455667777666 799998888888899999999999999999999964 3333344
Q ss_pred HhhHHHHHHhh-----cCC------chhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHH
Q 016338 283 IGPGVSLLCLN-----YAK------SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIIST 350 (391)
Q Consensus 283 ~~~~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~ 350 (391)
....++...+. ..+ .........+...+......+.......|..| ++|+++.|+.+...+++++++|
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~ 436 (481)
T TIGR00879 357 AGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVG 436 (481)
T ss_pred HHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433332 111 11222223333333333344556667688777 7999999999999999999999
Q ss_pred HHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 351 IGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 351 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
.+.+.+.++.| +...|++.+++.+++.+...+..+
T Consensus 437 ~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 437 FLFPTMLESIG-VGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHhcC-ccceehhHHHHHHHHHHHHheecc
Confidence 99999999887 888888888887777776655443
No 55
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=5.6e-34 Score=264.85 Aligned_cols=333 Identities=13% Similarity=0.105 Sum_probs=228.7
Q ss_pred ccchhhHHHHhCCChhhHHHHH-HHHH-----HHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchH--
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQ-SSFL-----WGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA-- 73 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~-s~~~-----~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~-- 73 (391)
++..|.+.+|++.++.+.+... +... ++..+++++.|+++||+|||+.+..+..+..++.++++++ ++++
T Consensus 35 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~--~~~~~~ 112 (434)
T PRK15075 35 GFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFV--PGYATI 112 (434)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhC--CcHHHH
Confidence 5678999999999888765443 3322 2234688999999999999999999999999999999554 8876
Q ss_pred ------HHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH--------hhcCchh
Q 016338 74 ------SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISG 139 (391)
Q Consensus 74 ------~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~--------~~~gwr~ 139 (391)
.+++.|+++|++.+...+....++.|++|+|+|++++++.+...++|..+++.+++.+. +.+|||+
T Consensus 113 ~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~ 192 (434)
T PRK15075 113 GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRI 192 (434)
T ss_pred HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHH
Confidence 46899999999999999999999999999999999999999999999888888887763 4689999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHH-HHHHHHHHHHHHH
Q 016338 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTV-IIANITNNWGYFV 218 (391)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 218 (391)
+|++......+ ... .++.+++.+ +...+ ++ +++.++.+++..++++.+.. ....+.....++.
T Consensus 193 ~f~~~~~~~~~-~~~----~~~~~~e~~---~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
T PRK15075 193 PFLIGCLIVPF-IFL----IRRSLEETE---EFLAR---KH-----RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYL 256 (434)
T ss_pred HHHHHHHHHHH-HHH----HHHhcCCCH---HHHHh---hh-----ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99975443222 111 122211110 00000 00 00111224445556555443 3334445566777
Q ss_pred HHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHH-HHH---Hhhc
Q 016338 219 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV-SLL---CLNY 294 (391)
Q Consensus 219 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~ 294 (391)
...|.|.|+++.+|++..+.++......+++.++.++.|++.||+++| + .. ..+...... ... ....
T Consensus 257 ~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r-------~-~~-~~~~~~~~~~~~~~~~~~~~ 327 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR-------P-VL-IAFTVLAILTAYPALSWLVA 327 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-------H-HH-HHHHHHHHHHHHHHHHHHHc
Confidence 889999999998899999988888888899999999999999999975 2 22 222222111 111 1112
Q ss_pred CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHH-HHHHHHHHhhHhhcccc
Q 016338 295 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTL-AAIISTIGTGYFVQWLG 361 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~i~~~~~g~l~~~~g 361 (391)
.++.........+.....+...+....+..|..| +.|+++.|+.+..... ++.++|.+.|.+.|+.|
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 328 APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 2222222222222222333344445566777777 8999999997666654 58889999999999887
No 56
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=4.8e-33 Score=255.91 Aligned_cols=332 Identities=16% Similarity=0.152 Sum_probs=259.1
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
.|.+|.+.+|+|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+..+..++.++.. .+++++.+++.|++
T Consensus 28 ~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~ 105 (394)
T PRK11652 28 VPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVAL--FAHSLTVLIAASAI 105 (394)
T ss_pred hccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH--HHccHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999999999998884 45999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+....+..|.+++++|+++.+..+.+..++..++|.+++.+.+..|||+.|++.++..++..+...+..||
T Consensus 106 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 185 (394)
T PRK11652 106 QGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPE 185 (394)
T ss_pred HHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999888888888999999999999999999999999999999999999998999999999888777666555556666
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
++++++++ ++ ...++++.+|+|+++...+..+........+..+.+.++++.+|.++.+.+..
T Consensus 186 ~~~~~~~~--~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 248 (394)
T PRK11652 186 TRPADARR--TR---------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSIL 248 (394)
T ss_pred cCccccch--hH---------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHH
Confidence 54332111 00 11256778889988877666666666666667788889998889999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc--CCchhHHHHHHHHHHHhhhhcccch
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITIALSLSSFSQAGY 319 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (391)
.....++..++..+.+++.||.++ +............+....... ..+.+.......+.....+...+..
T Consensus 249 ~~~~~~~~~~g~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 320 (394)
T PRK11652 249 FILPIPAAFFGAWFAGRPNKRFST--------LMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLA 320 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 888778888888888888888873 222222222222222222221 1233333333444444445556667
Q ss_pred hhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccc
Q 016338 320 LLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 360 (391)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 360 (391)
.....+..|++++++.++.+....+|..+++.+.+.+.+..
T Consensus 321 ~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 321 TSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 77777888889999999999999999999999999887663
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=7.7e-34 Score=260.09 Aligned_cols=354 Identities=16% Similarity=0.119 Sum_probs=259.0
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G 83 (391)
..+.+.+|++.++.+.+++.+.+.+++.+.+++.|+++||+|||+++.++..+..++.+.+.++ ++. ++.|+++|
T Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~--~~~---~~~r~l~G 99 (393)
T PRK11195 25 AAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFG--IHP---LLAYGLVG 99 (393)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHH--HHH---HHHHHHHH
Confidence 3556788999999999999999999999999999999999999999999999999888877443 443 78899999
Q ss_pred hhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCC
Q 016338 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (391)
++.+...|...+++.|++|+|+|++++++.+....+|..+||.+++.+.+. .|+..+.+.+...++.. +..+..||++
T Consensus 100 ~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~-~~~~~l~~~~ 177 (393)
T PRK11195 100 IGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAA-LFNLFIPRLG 177 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHhcCCCCc
Confidence 999999999999999999999999999999999999999999999999885 48877777665544433 3345566655
Q ss_pred CCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhh
Q 016338 164 CNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSA 243 (391)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 243 (391)
+++++.++++.+..++ .....++++++|.+........+............|.|+++.+|.++.+.|.+..
T Consensus 178 ~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~ 248 (393)
T PRK11195 178 ARRPGQSWNPIALLRD---------FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQA 248 (393)
T ss_pred ccccccCCCHHHHHHH---------HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHH
Confidence 4322211111110000 0113467788888776655555555566666777888998889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhh
Q 016338 244 VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNI 323 (391)
Q Consensus 244 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (391)
...++..++.+..+++.||.+++ ..+..+.. .+.....+...++.+.......+.+...+...+...+..
T Consensus 249 ~~~~g~i~g~~~~~~l~~~~~~~---------~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~ 318 (393)
T PRK11195 249 VVAIGIAVGAGAAARLVTLETVL---------RVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALL 318 (393)
T ss_pred HHHHHHHHHHHHHHHHhcCCccc---------chHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 99999999999999999987643 22233332 223333333333444333333333334444445556666
Q ss_pred hhcccc-c-hhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 324 QEIAPD-C-AGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 324 ~~~~~~-~-~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
++..|+ . +|++.++.+..++++..++..+.+.+ +..| .+..+.+.....+++..+...++
T Consensus 319 q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 319 QHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 777764 3 69999999999999999999999965 5666 67777776666666665554444
No 58
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=4.3e-33 Score=255.65 Aligned_cols=350 Identities=15% Similarity=0.093 Sum_probs=244.7
Q ss_pred cchhh-HHHHhCCChhhHHHHHHHHHH-HHHHHHHhhhhhhhhcCchHHH-HHHHHHHHHHHhhhhhhhccchHHHHHHH
Q 016338 3 VAVVP-LAAKFGWSSSFLGIVQSSFLW-GYIFSSVIGGALVDKYGGKKVL-AWGVALWSLSTLLTPWAATHSTASLLAVR 79 (391)
Q Consensus 3 ~~~~~-i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~r 79 (391)
|.+|. +.+|+|.|++++|++.+...+ ++.++.++.++ +||+||||.+ ..+.+..+++..+. +++++++.+++.+
T Consensus 36 p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~ 112 (393)
T PRK15011 36 PTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLF--AWNRNYFVLLFVG 112 (393)
T ss_pred HHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHH--HHhhHHHHHHHHH
Confidence 33444 678999999999999877655 55555555555 9999999875 45556666666666 4458888876665
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCccch--hhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhh
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPSHER--ASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~r--g~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 157 (391)
.+.|...+...|...+++.|+.++++| +...++.+.+.++|.+++|++++.+.+++|||..|++.++..++..+..+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 113 VFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 555444456778888888988876655 345578889999999999999999999999999999999888877777777
Q ss_pred ccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcC-CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc
Q 016338 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSK-LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (391)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 236 (391)
..||.++++++.++ + .+ ..+ ++ +..+...............+..+.|.|+++++|+++.
T Consensus 193 ~~~~~~~~~~~~~~-~---------~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~ 252 (393)
T PRK15011 193 FLPSMRKELPLATG-T---------LE-------APR---RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEK 252 (393)
T ss_pred hcCccCCCCccccc-c---------cc-------ccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 77776543221100 0 00 000 12 2233333333444455556667899999888999999
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcc
Q 016338 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQ 316 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (391)
+.+.+.....+..+++.++.|+++||+++| + ....+..............++.+.......+.....+...
T Consensus 253 ~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~ 323 (393)
T PRK15011 253 LAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-------F--LMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILG 323 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999888877778888999999999999965 2 2223333333222222233344433333333333333333
Q ss_pred cchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 317 AGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
+.......|..|++++++.++.+...++|..++|.+.|.+.|+.| ++..+.+..++.+++.+..+..+
T Consensus 324 ~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 324 GIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhc
Confidence 344566678888889999999999999999999999999999888 88898888888888777766553
No 59
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=4.2e-33 Score=254.73 Aligned_cols=345 Identities=11% Similarity=0.049 Sum_probs=267.9
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHH----HHHHHHHHHHHhhhhhhhccchHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVL----AWGVALWSLSTLLTPWAATHSTASLLAV 78 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~----~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 78 (391)
|.+|.+.+|+|.|.+++|++.+.+.+...++++++|+++||+|||+.. ..+..+..+ ..+ ..+++++.+++.
T Consensus 25 p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~--~~~~~~~~l~~~ 100 (382)
T TIGR00902 25 PFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFS--AGAHNAWLLFIA 100 (382)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHH--HhhhhHHHHHHH
Confidence 678899999999999999999999999999999999999999985433 222222222 122 245899999999
Q ss_pred HHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
|+++|.+.+...|...++..|+ +|+|++++|......++|.+++|++++.+.+++|||..|.+.+....+. +.....
T Consensus 101 ~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~-~~~~~~ 177 (382)
T TIGR00902 101 IGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFM-LIGFLI 177 (382)
T ss_pred HHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHH-HHHHHc
Confidence 9999999988889988887765 4789999999999999999999999999999999999998876553332 233333
Q ss_pred cccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchh
Q 016338 159 VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQA 238 (391)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 238 (391)
.|+.++++++ + + ++++..++.++++|||+++...+..++.......+.++.|.|+++ .|.++.+.
T Consensus 178 ~~~~~~~~~~--~-~-----------~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~ 242 (382)
T TIGR00902 178 KPTIPPKDAI--P-E-----------DESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASAT 242 (382)
T ss_pred CCCCCCCccc--c-c-----------cccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHH
Confidence 3332221110 0 0 001122356889999999999998898888999999999999988 89999999
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccc
Q 016338 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG 318 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (391)
+.+.....+..++.....+++.||+++ +..+..+.+...+........++.+......++-....+...+.
T Consensus 243 g~l~~~~~~~~i~~~~~~~~l~~r~g~---------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~ 313 (382)
T TIGR00902 243 GLLWGIGVLAEIIIFAFSNKLFQNCSA---------RDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA 313 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhCCH---------HHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888999999999999999984 45566788888888777777777776666666655555666666
Q ss_pred hhhhhhhccccchhHHHHHHHH-HHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHH
Q 016338 319 YLLNIQEIAPDCAGFLHGIANS-AGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~-~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (391)
...+.++.+++++++++++++. ...+|..++|.+.|.+.|+.| + ..|...+.+.+++.++
T Consensus 314 ~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 314 AMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence 7777777744788999999874 567899999999999999987 5 5566666666666544
No 60
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=4.7e-33 Score=255.47 Aligned_cols=347 Identities=12% Similarity=0.067 Sum_probs=258.8
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh-hccchHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-ATHSTASLLAVRA 80 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~~r~ 80 (391)
++++|.+++++|.|+++.|++.+.+.+++.+++++.|++.||+|||+++..+..+.+++.++...+ ..++++.+++.|+
T Consensus 23 ~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~ 102 (410)
T TIGR00885 23 NPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLF 102 (410)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999886332 2468999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh--------------------------h
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS--------------------------T 134 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~--------------------------~ 134 (391)
+.|+|.|...+..+.++.+..|+|+|++.+++.+...++|..++|.+++.+.. .
T Consensus 103 l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (410)
T TIGR00885 103 ILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL 182 (410)
T ss_pred HHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999987742 2
Q ss_pred cCchhHHHHHHHHHHHHHHHHhhc-cccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHH
Q 016338 135 IGISGPFILFSSLGLLWLSTWTSK-VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNN 213 (391)
Q Consensus 135 ~gwr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (391)
.+||++|.+.+++.++..+...+. .||.+++ +++ +.+...+.++++|+|+++...+..+++.
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~-----~~~------------~~~~~~~~~~~~~~~~~~~~~l~~f~yv 245 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNHS-----DAK------------QISFSASLSRLARIRHYREGVIAQFFYV 245 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-----ccc------------cccchhhHHHHHhChhHHHHHHHHHHHH
Confidence 469999999888777655444322 2221110 000 0011124567889999999888888888
Q ss_pred HHHHHHHHhhHHHHHhhh-CCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHh
Q 016338 214 WGYFVLLSWMPIYFNTVF-NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (391)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
..+....++++.|.++.. +.+...++...+.......+|+++.+++.||+++| +.+........+...+.
T Consensus 246 g~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~---------~~l~i~~~~~~~~~ll~ 316 (410)
T TIGR00885 246 GVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH---------KVLMAYAIIGMALCLGS 316 (410)
T ss_pred HHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH---------HHHHHHHHHHHHHHHHH
Confidence 888888899999997632 34444455566666678899999999999999853 33444455555555555
Q ss_pred hcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccccchhH-HHHHHHHHHHHHHHHHHHHhhHhhccc-----cchhHH
Q 016338 293 NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGF-LHGIANSAGTLAAIISTIGTGYFVQWL-----GSFQAF 366 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~g~~i~~~~~g~l~~~~-----g~~~~~ 366 (391)
...++..........+ ++.+..+|..++...+..+++..+ +.++.... +|+.+.|++.|.+.|.. |+++..
T Consensus 317 ~~~~~~~~~~~l~~~g-lf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~ 393 (410)
T TIGR00885 317 IFAGGHVGLYCLTLCS-AFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTS 393 (410)
T ss_pred HHcCChHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchH
Confidence 4544444433444444 444444477777776666644443 44444433 99999999999999964 347777
Q ss_pred HHHHHHHHHHH
Q 016338 367 LTVTAGLYFVT 377 (391)
Q Consensus 367 ~~~~~~~~~~~ 377 (391)
|.+-..+.+..
T Consensus 394 ~~~~~~~~~~~ 404 (410)
T TIGR00885 394 FILPLLCFAVI 404 (410)
T ss_pred HHHHHHHHHHH
Confidence 77655554443
No 61
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=9.1e-34 Score=268.63 Aligned_cols=360 Identities=15% Similarity=0.130 Sum_probs=246.5
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++.+|.+.+|+|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++.+++.++.++ ++|++.+++.|++
T Consensus 40 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l 117 (496)
T PRK03893 40 TLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGF--APGYWTLFIARLV 117 (496)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999998854 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+....++.|++|+|+|++++++.....++|..+++.+.+.+.+.++||+.|.+..+.. +..+......||
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~-~~~~~~~~~~p~ 196 (496)
T PRK03893 118 IGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI-IFALWLRKNLPE 196 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH-HHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999999999999999998754433 333333333444
Q ss_pred CCCCCCCCC-hhH-HHHHHcCCCcccccCCCccH---------HHhh----------------------------c--C-
Q 016338 162 DPCNSPFVS-KSE-LRLIQAGKSDSVKKRNPPSL---------RHLL----------------------------S--K- 199 (391)
Q Consensus 162 ~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~----------------------------~--~- 199 (391)
+++.+++.+ +++ .+..+.... ++++..... ...+ + +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (496)
T PRK03893 197 AEDWKEKHAGKAPVRTMVDILYR--GEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRW 274 (496)
T ss_pred chhhhhhccccccchhHHHHHhc--chhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccch
Confidence 332111100 000 000000000 000000000 0000 0 0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
+.........+...........++|.|+++.+|+++.+++.+.+...++..+++++.|++.||+++| ....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~---------~~~~ 345 (496)
T PRK03893 275 PTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR---------KAYV 345 (496)
T ss_pred hHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch---------HHHH
Confidence 0000001111111111123457899999877999999999999999999999999999999999864 2333
Q ss_pred HHhHhhHHHHHHhhcC-Cch-hHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 016338 280 IGFIGPGVSLLCLNYA-KSP-AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 356 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l 356 (391)
.+.....+..+..... ... +..........+......+.......+..| ++|++++|+.+....+|+.++|.+.|.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l 425 (496)
T PRK03893 346 CSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALI 425 (496)
T ss_pred HHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHH
Confidence 3333333333222222 222 222222222222222233445556677766 7999999999999999999999999999
Q ss_pred hccccchhHHHHHHHHHHHH
Q 016338 357 VQWLGSFQAFLTVTAGLYFV 376 (391)
Q Consensus 357 ~~~~g~~~~~~~~~~~~~~~ 376 (391)
.|+.| +...+...+....+
T Consensus 426 ~~~~g-~~~~~~~~~~~~~~ 444 (496)
T PRK03893 426 AQRLD-LGTALASLSFSLTF 444 (496)
T ss_pred hccCC-hHHHHHHHHHHHHH
Confidence 99988 77666555444433
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=4.9e-33 Score=251.78 Aligned_cols=330 Identities=28% Similarity=0.451 Sum_probs=289.1
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++..|.+.+++|.|+++.+++.+...++..+++++.|+++||+|||+.+..+..+..++.+...+ +++++.+++.|++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 96 (352)
T cd06174 19 SPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAF--ASSLWLLLVGRFL 96 (352)
T ss_pred HhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHH--hccHHHHHHHHHH
Confidence 46788899999999999999999999999999999999999999999999999999999998844 4999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+...+++.|++|+|+|++.+++.+...++|..+++.+++.+.+..+||+.+.+.++..++..+...+..
T Consensus 97 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 174 (352)
T cd06174 97 LGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-- 174 (352)
T ss_pred HHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999999999999999999999999999999999999999999998888777666554331
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHH
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWF 241 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (391)
|+++...+..+...........+.|.+.++..|.+..+.+..
T Consensus 175 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (352)
T cd06174 175 --------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLL 216 (352)
T ss_pred --------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 467777888888888999999999999999779999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchh
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI-MQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 320 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (391)
.....++..++.++.+++.||.++| . .+..+.....+........++.+.......+.....+...+...
T Consensus 217 ~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352)
T cd06174 217 LSLFGLGGILGALLGGLLSDRLGRR---------RLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALL 287 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHH
Confidence 9999999999999999999999954 3 55566666777666666666666666666666666666777788
Q ss_pred hhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 016338 321 LNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 321 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
....|..| ++|++.+|+.+...+++..++|.+.|.+.|..+ ++..+.+.+++.+++.+....
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 288 TLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHHhee
Confidence 88888877 899999999999999999999999999999877 889999988888887776543
No 63
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=4.1e-33 Score=263.61 Aligned_cols=369 Identities=17% Similarity=0.144 Sum_probs=248.5
Q ss_pred cchhhHHHHh-----CCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccc------
Q 016338 3 VAVVPLAAKF-----GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS------ 71 (391)
Q Consensus 3 ~~~~~i~~~~-----~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~------ 71 (391)
..+|.+.+++ +.++.+.+++.+.+.+++.+++++.|+++||+|||+.+.++.++..++.++++++ ++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~--~~~~~~~~ 114 (502)
T TIGR00887 37 LVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLS--PGSSPKSV 114 (502)
T ss_pred HHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc--cCcccchH
Confidence 4456666542 3456678999999999999999999999999999999999999999999888544 44
Q ss_pred hHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh------------------
Q 016338 72 TASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS------------------ 133 (391)
Q Consensus 72 ~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~------------------ 133 (391)
++.+++.|+++|++.|...+....++.|++|+|+|++++++.+....+|..+++.++..+..
T Consensus 115 ~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (502)
T TIGR00887 115 MATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGS 194 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccc
Confidence 78899999999999999999999999999999999999999999999999999988876532
Q ss_pred -----hcCchhHHHHHHHHHHHHHHHHhhccccCCCCC---CCCChhHHHHHH---c-C-C-C-cc------cccCCCcc
Q 016338 134 -----TIGISGPFILFSSLGLLWLSTWTSKVTNDPCNS---PFVSKSELRLIQ---A-G-K-S-DS------VKKRNPPS 192 (391)
Q Consensus 134 -----~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~-~-~-~-~~------~~~~~~~~ 192 (391)
.++||+.+.+.++.+++..+ ..++.||+|+.. ++.+++..+... + + . + ++ +++....+
T Consensus 195 ~~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
T TIGR00887 195 CVPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKAS 273 (502)
T ss_pred ccchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhh
Confidence 24799999887776665444 456789998741 111111111000 0 0 0 0 00 00111135
Q ss_pred HHHhhcC---CchHH----HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhH------------HhhhHHHHHHHHH
Q 016338 193 LRHLLSK---LPSWT----VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW------------FSAVPWGTMAVSG 253 (391)
Q Consensus 193 ~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------~~~~~~~~~~~~~ 253 (391)
+++++++ ++.+. .....+.....+++...+.|.++++ .|++..+.+. ......++.+++.
T Consensus 274 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~ 352 (502)
T TIGR00887 274 WSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGY 352 (502)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677653 22211 1223344445666777788999976 6887543221 1223344666788
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC---chhHHHHHHHHHH-Hhhhhcccchhhhhhhccc-
Q 016338 254 YMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK---SPAVAAVLITIAL-SLSSFSQAGYLLNIQEIAP- 328 (391)
Q Consensus 254 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 328 (391)
++.+++.||+||| ..+..+..++.++...+.... +........++.. .......+....+..|.+|
T Consensus 353 ~~~~~l~dr~gRR---------~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~ 423 (502)
T TIGR00887 353 WVTVFLVDIIGRK---------PIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPT 423 (502)
T ss_pred HHHHHHhhhhcch---------hHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCch
Confidence 8999999999964 333444444444333332211 1111112222222 2222234455667789888
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc---------chhHHHHHHHHHHHHHHHHHHHh
Q 016338 329 DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG---------SFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 329 ~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g---------~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
+.|+++.|+.+...+++++++|.+.+.+.|..+ ++...+.+.+++.+++.+..++.
T Consensus 424 ~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~l 488 (502)
T TIGR00887 424 RYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLI 488 (502)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEe
Confidence 899999999999999999999999999988531 14556777777777766655433
No 64
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=2e-32 Score=250.35 Aligned_cols=346 Identities=13% Similarity=0.061 Sum_probs=258.8
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCch----HHHHHHHHHHHHHHhhhhhhhccchHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGK----KVLAWGVALWSLSTLLTPWAATHSTASLLA 77 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 77 (391)
.|.+|.+.+|+|.|.+++|++.+++.++..+++++.|+++||+||| +.+.+...+.. .... ..+++++.+++
T Consensus 24 ~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~l~i 99 (382)
T PRK11128 24 LPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFA--VAFW--FGAHSFWLLFV 99 (382)
T ss_pred hhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHH--HHHH--HhcccHHHHHH
Confidence 4678889999999999999999999999999999999999999994 33333222221 1222 23588999999
Q ss_pred HHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhh
Q 016338 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 157 (391)
.|++.|++.+...|...+++.++ +|+|+++.+......++|..+||++++++.+++|||..|++.++..++..+. ..
T Consensus 100 ~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~-~~ 176 (382)
T PRK11128 100 AIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLG-QL 176 (382)
T ss_pred HHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHH-HH
Confidence 99999999988889888888877 4678899999999999999999999999999999999999877655544333 33
Q ss_pred ccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcch
Q 016338 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (391)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (391)
..||++++++ +++ ++++...++++++|+|+++...+..++.........++.|.|+++ .|.++.+
T Consensus 177 ~~~~~~~~~~----~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~ 241 (382)
T PRK11128 177 LRPTIMPQGE----SRQ----------QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSAST 241 (382)
T ss_pred ccCCCCCccc----ccc----------ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhH
Confidence 3343221110 000 011123467899999999998888887777777788899999977 7999999
Q ss_pred hhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhccc
Q 016338 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQA 317 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (391)
.+.+.+...+...+...+.+++.||+++| ..+..+.+..++........++.+......++.+...+...+
T Consensus 242 ~g~~~~~~~~~~~~~~~~~g~l~~r~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 312 (382)
T PRK11128 242 IGYLWSLGVVAEVLIFAFSNRLFRRWSAR---------DLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHL 312 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHH---------HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888999999999999854 445566666666666666666666555554444444455556
Q ss_pred chhhhhhhccccchhHHHHHHHHH-HHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHH
Q 016338 318 GYLLNIQEIAPDCAGFLHGIANSA-GTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~-~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (391)
....+..+..++++++..+..+.. ...|..++|.+.|.+.|+.| . ..+...+++.+++.+.
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~~ 374 (382)
T PRK11128 313 AAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALFI 374 (382)
T ss_pred HHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHHH
Confidence 666667777677778999988744 56677999999999999988 4 4555566555555443
No 65
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=5.5e-33 Score=254.63 Aligned_cols=346 Identities=15% Similarity=0.110 Sum_probs=258.1
Q ss_pred hhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhh
Q 016338 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (391)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g 85 (391)
+.+++++|+|.+++|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.++.++ +++++.+++.|.+.|.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~ 109 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL--VNNVTLVVLFFALINCA 109 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999999999999999888888744 48999999999999988
Q ss_pred hhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCCCC
Q 016338 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCN 165 (391)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (391)
.+...+...++..|..|+++|++++++.....++|..++|.+++.+.+ .+||.+|.+.++..++..+...+..||++++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 188 (395)
T PRK10054 110 YSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA 188 (395)
T ss_pred HHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 888888899999999999999999999999999999999999998875 7999999998877777655555545443322
Q ss_pred CCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhh--hCCCcchhhHHhh
Q 016338 166 SPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV--FNVNLKQAAWFSA 243 (391)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~ 243 (391)
+++ +++ +..+.++.+|||+++...+..++..........+.+.|..+. .+.+....+....
T Consensus 189 ~~~--~~~---------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 251 (395)
T PRK10054 189 IAT--ETG---------------SVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLP 251 (395)
T ss_pred ccc--chh---------------hhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHH
Confidence 110 000 001236778899998888887777777666667777777543 3455566677777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC-CchhHHHHHHHHHHHhhhhcccchhhh
Q 016338 244 VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITIALSLSSFSQAGYLLN 322 (391)
Q Consensus 244 ~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (391)
...+.....+...+++.||.++| ..+..+.....+....+... ++.+...+.............+.....
T Consensus 252 ~~~~~~~~~~~~~g~~~~~~~~~---------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~ 322 (395)
T PRK10054 252 VNAAMVVSLQYSVGRRLNAANIR---------PLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYML 322 (395)
T ss_pred hhhhheeeehhHHHHHHccCCch---------hHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 77676677778888999998753 34445555555554444332 333333333333333334444556666
Q ss_pred hhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHH
Q 016338 323 IQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWN 382 (391)
Q Consensus 323 ~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 382 (391)
..+..| +.+++..+..+ ...+|..+||.+.|.+.|+.| +...+.+.+.+..+..++..
T Consensus 323 ~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 323 IDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHHHHHHH
Confidence 777666 78899988655 677899999999999999998 77788777666666655554
No 66
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=1.9e-33 Score=258.98 Aligned_cols=343 Identities=24% Similarity=0.287 Sum_probs=254.7
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
++..|.+.+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+.+..+..+..++.++.. .+++++.+++.|++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 114 (398)
T TIGR00895 37 GFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCA--LATNVTQLLILRFL 114 (398)
T ss_pred HhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHH--HccchHHHHHHHHH
Confidence 3567889999999999999999999999999999999999999999999999999999888884 44999999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..|||+.|++.+++..+..+......||
T Consensus 115 ~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (398)
T TIGR00895 115 AGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPE 194 (398)
T ss_pred HhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999877777666666666777
Q ss_pred CCCCCCCCChhH-HH---HHHcC--CC----cccc---cCCCcc-HHHhhcC---CchHHHHHHHHHHHHHHHHHHHhhH
Q 016338 162 DPCNSPFVSKSE-LR---LIQAG--KS----DSVK---KRNPPS-LRHLLSK---LPSWTVIIANITNNWGYFVLLSWMP 224 (391)
Q Consensus 162 ~~~~~~~~~~~~-~~---~~~~~--~~----~~~~---~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (391)
+++...++++++ .+ ....+ .+ .+++ ++..++ .+..+++ +..+...+..++..........+.|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (398)
T TIGR00895 195 SIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP 274 (398)
T ss_pred CChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 654221111111 00 00000 00 0000 111111 2223332 2334444555566667777778888
Q ss_pred HHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHH
Q 016338 225 IYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVL 304 (391)
Q Consensus 225 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (391)
.+. ++.|.++.+.+.......++..+++++.+++.||+++| ....................++.......
T Consensus 275 ~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (398)
T TIGR00895 275 KLM-VELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR---------VTALLLLLGAVFAVLVGSTLFSPTLLLLL 344 (398)
T ss_pred HHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH---------HHHHHHHHHHHHHHHHHHHhhCHHHHHHH
Confidence 554 44899999999999999999999999999999999853 22222222222222222223344444444
Q ss_pred HHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 016338 305 ITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 356 (391)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l 356 (391)
.++.+...+...+.......|..| ++|+++.|+.+...++|..++|.+.|.+
T Consensus 345 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 345 GAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 444444455556667777888777 8999999999999999999999999976
No 67
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.8e-33 Score=256.44 Aligned_cols=373 Identities=18% Similarity=0.220 Sum_probs=312.7
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHH-HHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLA-VRA 80 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~r~ 80 (391)
+.+.++++++++-+.++++|+.++....+.+..|+.+.+.||+|.|.+.+.|.++..+|.++.++ +++.|++++ .-+
T Consensus 66 Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF--~~~i~~l~lt~gv 143 (509)
T KOG2504|consen 66 GLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSF--ATSLWQLYLTFGV 143 (509)
T ss_pred hhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHH--HhhHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999955 499988765 568
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
+.|+|.+..+.....++..|| +|||+.+.|+...+.++|..+-|.+...+.+..|||+.+++.+.+.+-..+......|
T Consensus 144 i~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 144 IGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCC
Confidence 889999999999999999999 5999999999999999999999999999999999999999999998877777777766
Q ss_pred cCCCCCCC-----------------------------CCh---hHHHHHHcCCCcccccCCCccH----HHhhcCCchHH
Q 016338 161 NDPCNSPF-----------------------------VSK---SELRLIQAGKSDSVKKRNPPSL----RHLLSKLPSWT 204 (391)
Q Consensus 161 ~~~~~~~~-----------------------------~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 204 (391)
..++..+. ..+ .+....++..++.+....+... .+++|+|.++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~ 302 (509)
T KOG2504|consen 223 LSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLL 302 (509)
T ss_pred CCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHH
Confidence 33332111 000 0000000000000100111222 58899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHh
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 284 (391)
+.+...+...++.....++|.|.++ .|++..+++.+.++.++..++++++.|++.|+...+ ++.+..++.+.
T Consensus 303 ~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~-------~~~~~~~~ll~ 374 (509)
T KOG2504|consen 303 LALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR-------ALVLFLLTLLI 374 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc-------hHHHHHHHHHH
Confidence 9999999999999999999999997 899999999999999999999999999999998855 66777888888
Q ss_pred hHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccch
Q 016338 285 PGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSF 363 (391)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 363 (391)
.++..+.....++.+......++.+...+...........|..+ ++-..+.|+...+..++..++|++.|.+.|..|+|
T Consensus 375 ~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y 454 (509)
T KOG2504|consen 375 AGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY 454 (509)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCe
Confidence 88888888888888777777777666666666666667777777 89999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 016338 364 QAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
...|...+.+.+++..++++.+
T Consensus 455 ~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 455 DHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999998877665
No 68
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=2.9e-31 Score=249.12 Aligned_cols=358 Identities=13% Similarity=0.150 Sum_probs=264.2
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc-----CchHH-HHHHHHHHHHHHhhhhhhh-ccchHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-----GGKKV-LAWGVALWSLSTLLTPWAA-THSTASL 75 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~~~~~~~~~a~-~~~~~~~ 75 (391)
..+|...++.|.|.+++|.+ +.....+ ++++++|+++||+ ||||. +..+.+..+++....++.. .++++.+
T Consensus 33 ~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l 110 (491)
T PRK11010 33 GTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWL 110 (491)
T ss_pred HHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHH
Confidence 45788888899999999997 4444444 5899999999999 99985 6677777777776664432 2578889
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh-hcCchhHHHHHHHHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-TIGISGPFILFSSLGLLWLST 154 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~-~~gwr~~f~~~~~~~~~~~~~ 154 (391)
.+.+++.|++.+...+...+++.|++|+|||+++.++...+..+|.++++.++..+.+ ..|||..|++.+++.++..+.
T Consensus 111 ~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 111 AALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988 579999999999887776555
Q ss_pred HhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCC
Q 016338 155 WTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN 234 (391)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 234 (391)
.+. .||+++++++ +++. +++...++++.+++|+.|...+..+...........+.+.|+.+++|+|
T Consensus 191 ~~~-~~e~~~~~~~-~~~~------------~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s 256 (491)
T PRK11010 191 TLL-APEPTDTIPV-PKTL------------EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFD 256 (491)
T ss_pred HHh-cCCCcccccc-ccch------------hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 443 5665432111 0000 0001235677888888887776666666677777788888987778999
Q ss_pred cchhhHHhh-hHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHH---HHHHhhcC-CchhHHHHHHHHHH
Q 016338 235 LKQAAWFSA-VPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV---SLLCLNYA-KSPAVAAVLITIAL 309 (391)
Q Consensus 235 ~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~ 309 (391)
+.+.+.... ...++.+++.++.|++.||+++| | .. ..+.....+ ........ ++.........+..
T Consensus 257 ~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-------~-~l-~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~ 327 (491)
T PRK11010 257 AGEVGLVNKTLGLLATIVGALYGGILMQRLSLF-------R-AL-MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFEN 327 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-------H-HH-HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 999999874 55678999999999999999964 2 22 222222222 11222222 23322222233322
Q ss_pred Hhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 310 SLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
...+...+...+...+..+ +.+++..|+.+....+|..+++.+.|.+.|..| |+..|.+..++.+.+.+.....++
T Consensus 328 ~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 328 LCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2233333445666666666 688999999999999999999999999999988 999999999999998887776653
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=3.3e-32 Score=250.35 Aligned_cols=347 Identities=16% Similarity=0.160 Sum_probs=247.7
Q ss_pred cchhhHHHHhC--CChhhHHHHHHH-----HHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchH--
Q 016338 3 VAVVPLAAKFG--WSSSFLGIVQSS-----FLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA-- 73 (391)
Q Consensus 3 ~~~~~i~~~~~--~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~-- 73 (391)
+..+.+.+++. .++++.+...+. ..++..+++++.|+++||+|||+++..+.++..++.++++++ ++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--~~~~~~ 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLL--PSYATI 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhC--CChhhh
Confidence 34556666653 455666665543 333445688999999999999999999999999999998554 7764
Q ss_pred ------HHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH--------hhcCchh
Q 016338 74 ------SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML--------STIGISG 139 (391)
Q Consensus 74 ------~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~--------~~~gwr~ 139 (391)
.+++.|+++|++.+...+...+++.|++|+|+|++..+..+.+..+|..+++.++..+. +.++||+
T Consensus 92 ~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~ 171 (394)
T TIGR00883 92 GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRI 171 (394)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHH
Confidence 47899999999999999999999999999999999999999999999999998877654 3578999
Q ss_pred HHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCc--hHHHHHHHHHHHHHHH
Q 016338 140 PFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLP--SWTVIIANITNNWGYF 217 (391)
Q Consensus 140 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 217 (391)
.|.+.+++.++.... ....||+++++++ + + ++++...+.++.+++++ ++......+.......
T Consensus 172 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----~----~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T TIGR00883 172 PFLVSAVLVLIGLYL-RRNLEETPVFEKA-----Q----E-----KHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFY 236 (394)
T ss_pred HHHHHHHHHHHHHHH-HHhcCCChhHHHH-----H----h-----ccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 999877666554333 2233443321110 0 0 01112335677777766 7777777777777888
Q ss_pred HHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHH--HH-Hhhc
Q 016338 218 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS--LL-CLNY 294 (391)
Q Consensus 218 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~ 294 (391)
....+.|.|+++++|.++.+.+.......+...+++++.|++.||+++| + .....+....... .. ....
T Consensus 237 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-------~-~~~~~~~~~~~~~~~~~~~~~~ 308 (394)
T TIGR00883 237 LITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR-------P-VLIIFTVLAALLAVPLLMALLD 308 (394)
T ss_pred HHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-------H-HHHHHHHHHHHHHHHHHHHHhc
Confidence 8889999999887899999999999999999999999999999999965 2 2222222222222 11 1112
Q ss_pred CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHH-HHHHHHHHHHHHHhhHhhccccchhHHHHHHHH
Q 016338 295 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIAN-SAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAG 372 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~-~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~ 372 (391)
.++.+......+......+...+.......|..| ++|+++.++.+ ....+|..++|.+.|.+.|+.|.+...++....
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 309 SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 2333333333444444444556667778888777 78999999854 445678889999999999998855555555544
Q ss_pred HH
Q 016338 373 LY 374 (391)
Q Consensus 373 ~~ 374 (391)
..
T Consensus 389 ~~ 390 (394)
T TIGR00883 389 LA 390 (394)
T ss_pred HH
Confidence 43
No 70
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-31 Score=224.89 Aligned_cols=355 Identities=16% Similarity=0.169 Sum_probs=287.5
Q ss_pred CccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
++|+++++++|+|.|.++.|.++++..++..+.+++..+++.|+|.++.+..++++.++|.++-.. .+.+.++.+-.
T Consensus 31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~---~~~~~L~~gt~ 107 (395)
T COG2807 31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSL---GGLPLLFLGTL 107 (395)
T ss_pred hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhc---ccHHHHHHHHH
Confidence 478999999999999999999999999999999999999999999999999999999999999843 47788899999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-CchhHHHHHHHHHHHHHHHHhhcc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKV 159 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 159 (391)
+.|.|.+...+..++++.+.|| |+-+..+|+++...++|..+++.+...+.++. |||.....-+.++++..+.++...
T Consensus 108 l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~ 186 (395)
T COG2807 108 LAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA 186 (395)
T ss_pred HHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999996 88999999999999999999999999998887 799999999999888777765432
Q ss_pred ccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhh
Q 016338 160 TNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 239 (391)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 239 (391)
.+++ .. ..+.+..+..+++|+|.-|.+.+.+.++...++....|+|.++.| .|+|++++|
T Consensus 187 -~r~~-~~-----------------~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG 246 (395)
T COG2807 187 -LREQ-AA-----------------SIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAG 246 (395)
T ss_pred -cccc-cc-----------------ccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhh
Confidence 1110 00 011122234578999999999999999999999999999999999 799999999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccch
Q 016338 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGY 319 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (391)
.+.+...+...+..+....+.+|..++ +.........+.++.+-+.+.+.........+++.+..+.+ +..
T Consensus 247 ~llsl~~l~~~~~~ll~P~la~R~~n~--------r~~~~~~~~~~l~G~~G~~~~P~~~~~lw~~llG~G~G~~F-~la 317 (395)
T COG2807 247 SLLSLMQLAQLPTALLIPLLARRSKNQ--------RPLVVLALLLMLVGLVGLLLAPGQLPILWALLLGLGQGGAF-PLA 317 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccc--------chHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhCccchHH-HHH
Confidence 999999999999999999999996654 33434444445555544444443332222344444443333 333
Q ss_pred hhhhh--hccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 320 LLNIQ--EIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 320 ~~~~~--~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
..... ...|++.++-+|+.+.++++-...||.+.|++.|..|+|...+.......++..+.-+...|.+
T Consensus 318 L~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~~ 388 (395)
T COG2807 318 LTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRNR 388 (395)
T ss_pred HHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchhH
Confidence 33333 3444788999999999999999999999999999999999999888888877777766655543
No 71
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.3e-34 Score=248.71 Aligned_cols=353 Identities=18% Similarity=0.184 Sum_probs=269.0
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G 83 (391)
..+++++.+|+++++.|++.+.+.+.+++++|+.|+++|||+||+++.+|..++.++.+++++. +.||++++.|.+.|
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs--~~Fwq~~l~R~~vG 132 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS--NHFWQVLLCRGFVG 132 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH--HHHHHHHHHHHHhc
Confidence 5678999999999999999999999999999999999999999999999999999999999554 99999999999999
Q ss_pred hhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC-chhHHHHHHHHHHHHHHHHhhccccC
Q 016338 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
+|.+...|..+++++|.+|.++|++++++++.....|..+|.+.+..+.+..+ |||.|+..++++++..++.+++.+|+
T Consensus 133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999999999999999999999999999988766 99999999999999999999998887
Q ss_pred CCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhh---hCCCcchhh
Q 016338 163 PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV---FNVNLKQAA 239 (391)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~ 239 (391)
++..+++.+.+.+ ......+..++.+...|+|.+....+.+....+....+..|.|.+.... .|.+..+..
T Consensus 213 ~rga~~~~~~~~~------~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ 286 (493)
T KOG1330|consen 213 ERGARDEVDGENK------MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATL 286 (493)
T ss_pred ccccccccccCCc------CCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccch
Confidence 7643322111110 0112233455677788888888888888888888888888888766543 355666666
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhhccch--hHHHHHHHHHHhHhhHHHHHHhhcCC--chhHHHHHHHHHHHhhhhc
Q 016338 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSL--TLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFS 315 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 315 (391)
.+..+...++.+|.+.+|.++||+.++.+.. ..........+.......+.+..... +.+..+++++++.......
T Consensus 287 ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~ 366 (493)
T KOG1330|consen 287 IFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFN 366 (493)
T ss_pred hhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 7778888899999999999999976542211 11111222223333333333333222 2334444455555555555
Q ss_pred ccchhhhhhhc-cccchhHHHHHHHHHHHH-HHHHHHHHhhHhhccccchh
Q 016338 316 QAGYLLNIQEI-APDCAGFLHGIANSAGTL-AAIISTIGTGYFVQWLGSFQ 364 (391)
Q Consensus 316 ~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~-g~~i~~~~~g~l~~~~g~~~ 364 (391)
+....-+..++ +|++|.+++++...+..+ |.+-+|++.|.+.|+.-++.
T Consensus 367 ~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 367 WATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred cccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 55555555554 459999999999888876 55666669999998753344
No 72
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=1.7e-31 Score=247.54 Aligned_cols=360 Identities=16% Similarity=0.100 Sum_probs=240.9
Q ss_pred hHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhh-hhccc-----hHHHHHHHH
Q 016338 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AATHS-----TASLLAVRA 80 (391)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-a~~~~-----~~~~~~~r~ 80 (391)
.+.+|+|+|..++|++.+.+.++..+++++.|+++||+|||+++.++..+.+++...... ..++. .....+.++
T Consensus 36 ~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (420)
T PRK09528 36 WLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGI 115 (420)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355669999999999999999999999999999999999999998876665544332211 11111 111222333
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
..|.+.....+....+..+ . ++++++.++......++|..++|++++.+.+ .+|+.+|++.+++.++..+..+...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 116 YLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred HhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccc
Confidence 3343333333333333322 2 3556788899999999999999999998876 58999999988887776666655555
Q ss_pred cCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhh---CCCcch
Q 016338 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---NVNLKQ 237 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~ 237 (391)
|++++++.. +++. +++++...++.++.+|||+++...+........+.....+.|.|+.+.. +.+..+
T Consensus 193 ~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (420)
T PRK09528 193 DAPSTAKVA-NALG--------ANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRV 263 (420)
T ss_pred cccchhhhc-cchh--------cccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHH
Confidence 543321110 0000 0011122234567889998877666665555556666667788776643 456667
Q ss_pred hhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhccc
Q 016338 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQA 317 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (391)
.+.+.+...+...++.++.|++.||+++| ..+..+..+..+........++.+.......+.....+...+
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~---------~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAK---------NALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcc---------hhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888999999999999999965 334444555555555555566666544444443333333334
Q ss_pred chhhhhhhccc-cchhHHHHH-HHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 318 GYLLNIQEIAP-DCAGFLHGI-ANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 318 ~~~~~~~~~~~-~~~~~~~g~-~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
....+..+..| +.+++..+. .+....+|..++|.+.|++.|..| ++..|...+++.++..++.....+++
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44455566555 778877665 677788999999999999999988 89999988887776666555544433
No 73
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-32 Score=246.80 Aligned_cols=350 Identities=21% Similarity=0.188 Sum_probs=266.0
Q ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhh
Q 016338 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEG 87 (391)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~ 87 (391)
+.+|.+....+.+.+.+++.+++++++++++.+.||++..+.+....+++++-.++... .+|++.+++.|++.|+.++
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~--~~s~~~~ialr~llGl~es 149 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAA--VHSFPGLIALRFLLGLFES 149 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHhc
Confidence 45888899999999999999999999999999999999999999998888888877744 4999999999999999999
Q ss_pred chhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH------hhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 88 VAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML------STIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~------~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
..+|....+++.|+.++||++.++++.+..++|.++|.+++..+. ...||||.|++.++++++..++.++++|+
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 999999999999999999999999999999999999999998863 35689999999999999999999999999
Q ss_pred CCCCCCCCChhHHH----HHH-cCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc
Q 016338 162 DPCNSPFVSKSELR----LIQ-AGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (391)
Q Consensus 162 ~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 236 (391)
.|++.+..+++|+. ..+ +.....+++.++..+++.+++|..|...+..++.....+++.+|+|.|+++..|+|..
T Consensus 230 ~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~ 309 (495)
T KOG2533|consen 230 NPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSEL 309 (495)
T ss_pred ChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChH
Confidence 99977655555532 122 2222223335667889999999999999999999999999999999999996679999
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHH--hhccchhHHHHHHH-HHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhh
Q 016338 237 QAAWFSAVPWGTMAVSGYMAGKASDSLI--KAGYSLTLVRKIMQ-SIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSS 313 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (391)
++..+..+..++++++.+++|+++||.+ .+ ++... ....+...++...+...+.........+.+.....
T Consensus 310 ~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~-------~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~ 382 (495)
T KOG2533|consen 310 QANLLSTPYDVGGIVGLILAGYLSDRLKTIFA-------RRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLI 382 (495)
T ss_pred HhccccchHHhhhHHHHHHHHHHHHHHhhhHH-------HHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhH
Confidence 9999999999999999999999999953 11 33333 33333344443444444333333333333333333
Q ss_pred hcccchhhhhhhc-cc-cchhHHHHHHHHHHHHHHHHHHHHhh-HhhccccchhHHH
Q 016338 314 FSQAGYLLNIQEI-AP-DCAGFLHGIANSAGTLAAIISTIGTG-YFVQWLGSFQAFL 367 (391)
Q Consensus 314 ~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~g~~i~~~~~g-~l~~~~g~~~~~~ 367 (391)
...+......++. .+ .++-+..+........++.++|.+.- ....+++ +...+
T Consensus 383 ~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~-~~~~f 438 (495)
T KOG2533|consen 383 ATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYG-WGAVF 438 (495)
T ss_pred HHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchh-hhhHH
Confidence 3334444444443 33 34445555555555555555554443 3344444 44444
No 74
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=9.6e-30 Score=234.31 Aligned_cols=356 Identities=13% Similarity=0.076 Sum_probs=251.6
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc-----CchH-HHHHHHHHHHHHHhhhhhhh-ccchHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-----GGKK-VLAWGVALWSLSTLLTPWAA-THSTASL 75 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~~~~~~~~~~~~~a~-~~~~~~~ 75 (391)
..+|.+.+|.|.|.+|+|++..+... .+.++++|+++||+ |||| .+.++..+.+++..+.++.. .++++.+
T Consensus 20 ~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l 97 (402)
T PRK11902 20 GTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPL 97 (402)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHH
Confidence 46788889999999999999777776 58999999999999 8876 78888888877777764442 2457778
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh-cCchhHHHHHHHHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLST 154 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~ 154 (391)
.+..++.+...+...+...+++.|+.|+|||+++.++...+.++|..+++.+++.+.+. .|||..|++.+++.++..+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 98 AGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999999999999999999999998885 59999999988887665554
Q ss_pred HhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCC
Q 016338 155 WTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN 234 (391)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 234 (391)
. +..||+++++++. ++..+ +..+++++++|||.++...+..++..........+.+.++.+++|++
T Consensus 178 ~-~~~~e~~~~~~~~-~~~~~------------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~ 243 (402)
T PRK11902 178 T-LWAPEPEVPARPP-RSLGE------------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFS 243 (402)
T ss_pred H-HhcCCCccccccc-chhHH------------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC
Confidence 3 4455543322111 11000 11235778999999988777766666554444455566777778999
Q ss_pred cchhhHHhhhHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHH---HHHHhhcC-CchhHHHHHHHHHH
Q 016338 235 LKQAAWFSAVPW-GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV---SLLCLNYA-KSPAVAAVLITIAL 309 (391)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~ 309 (391)
+++.+.+....+ ++.+++.++.+++.||+++| +. +..+.....+ ........ ++.+.......+..
T Consensus 244 ~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-------~~--l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (402)
T PRK11902 244 AGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-------RS--LMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIEN 314 (402)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-------HH--HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 999999876654 46888999999999999965 32 2222222222 22222232 23333333322211
Q ss_pred Hh----hhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 310 SL----SSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 310 ~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
.. ............++..| ++..+..+....++...++.+.|.+.|+.| +...|...+.+.+++.++.+..+
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 315 LCGGMGTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 22233334444444444 444566666777888777889999999999 89999999888888877765554
Q ss_pred cC
Q 016338 386 TG 387 (391)
Q Consensus 386 ~~ 387 (391)
++
T Consensus 391 ~~ 392 (402)
T PRK11902 391 GT 392 (402)
T ss_pred hh
Confidence 43
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=100.00 E-value=3.9e-30 Score=236.59 Aligned_cols=358 Identities=15% Similarity=0.078 Sum_probs=252.3
Q ss_pred cchhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhh-hhhc-----cchHHH
Q 016338 3 VAVVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTP-WAAT-----HSTASL 75 (391)
Q Consensus 3 ~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~-~a~~-----~~~~~~ 75 (391)
|.+|. +.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+.+..+....+++..... +..+ +.+...
T Consensus 23 ~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (396)
T TIGR00882 23 PFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGA 102 (396)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34554 4567899999999999999999999999999999999999999887766655443221 1111 223445
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTW 155 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 155 (391)
.+.|++.|++.+...+....+..|.. +++++.++......++|..++|.+++.+.+ .+||.+|++.+.+.++..+..
T Consensus 103 ~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~ 179 (396)
T TIGR00882 103 IVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLL 179 (396)
T ss_pred HHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHH
Confidence 67788999988888888887777753 344567788888899999999999998765 699999999988888776665
Q ss_pred hhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhh---C
Q 016338 156 TSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---N 232 (391)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g 232 (391)
+...||+|++++. +++ .+.++++++.++.++.+|||+++...+..+.....+.....+.|.|+++.+ +
T Consensus 180 ~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 250 (396)
T TIGR00882 180 MFAKPKAPSSATV--ANA-------LGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQ 250 (396)
T ss_pred HHhCCCCchhhhh--hcc-------cccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 5555544332110 000 000111222346789999999988777777766666677778888888754 4
Q ss_pred CCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhh
Q 016338 233 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 312 (391)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (391)
.+....+...+...+...++....+++.||+++| ..+..+..+.++........++.+......++.....
T Consensus 251 ~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~---------~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~ 321 (396)
T TIGR00882 251 QGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK---------NALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEV 321 (396)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------hhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence 4556678888888888899999999999999964 3444555555555555455555555444433333332
Q ss_pred hhcccchhhhhhhccc-cchhHHHHH-HHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHH
Q 016338 313 SFSQAGYLLNIQEIAP-DCAGFLHGI-ANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWN 382 (391)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~g~-~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 382 (391)
.........+.++..| +.+++..+. .+....+|+.++|.+.|++.|..| ++..|.+.+++.++..+...
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 322 PFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHHHH
Confidence 2222223334444444 666776665 678899999999999999999988 99999998888777766543
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=100.00 E-value=5.7e-30 Score=236.04 Aligned_cols=355 Identities=11% Similarity=0.055 Sum_probs=249.2
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCc-hHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGG-KKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
+++.+.+.+++|.|.+|+|++.+.+.++..++++++|+++||+|| |+++.++.++..++..+.. +.++++.+.+.|+
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 100 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA--QVTTPAGMFPVLL 100 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH--HhcCHHHHHHHHH
Confidence 455667788899999999999999999999999999999999965 7788888888888877774 4489999999999
Q ss_pred HHHhhhhchhhhHHHHhhhh--------cCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHH
Q 016338 81 FFGLAEGVAMPAMSTLTSRW--------FPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL 152 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~--------~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 152 (391)
+.|++.+...+...++..++ .....|.+..| .+|.+++|.+++.+....+|+ +|++.+++.++..
T Consensus 101 l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~ 173 (418)
T TIGR00889 101 ANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLG 173 (418)
T ss_pred HHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHH
Confidence 99998877777666554222 22223444444 478899999988874333454 4666666666655
Q ss_pred HHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhC
Q 016338 153 STWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 232 (391)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 232 (391)
+. .+..||+|+++++.+++.. +....+.++++|+|+++...+..++..........+.|.|+++ .|
T Consensus 174 ~~-~~~~~e~~~~~~~~~~~~~------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 239 (418)
T TIGR00889 174 VF-ALTLPDIPVAKSTAKMSIK------------VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FG 239 (418)
T ss_pred HH-HhcCCCCCCCccccccCHH------------HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hc
Confidence 44 4456666532211111000 0011234678899998888888887777666777888888877 56
Q ss_pred CCc--------chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC-ch---hH
Q 016338 233 VNL--------KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-SP---AV 300 (391)
Q Consensus 233 ~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~ 300 (391)
.++ ...+...+...+..+++.+..|++.||+++| ..+..+.+...+....+.... +. +.
T Consensus 240 ~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r---------~~l~~~~~~~~v~~~l~~~~~~~~~~~~~ 310 (418)
T TIGR00889 240 RNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK---------KVMLLSLVAWALRFGFFAYGDPEYFGYAL 310 (418)
T ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHcCcchhhHHH
Confidence 543 5568888888899999999999999999953 455566666666554444322 11 22
Q ss_pred HHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHH-HHHHHHHHHHHHHhhHhhccccc-----hhHHHHHHHHH
Q 016338 301 AAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIAN-SAGTLAAIISTIGTGYFVQWLGS-----FQAFLTVTAGL 373 (391)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~-~~~~~g~~i~~~~~g~l~~~~g~-----~~~~~~~~~~~ 373 (391)
.....++.+...+...+....+..|..| ++|++++|+.+ ....+|..++|.+.|.+.|+.|+ |+..|.+.+++
T Consensus 311 l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~ 390 (418)
T TIGR00889 311 LFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGY 390 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHH
Confidence 2222333333334445555667777777 89999999997 56789999999999999998652 78888888777
Q ss_pred HHHHHHHHHHhccCc
Q 016338 374 YFVTTIFWNLYSTGE 388 (391)
Q Consensus 374 ~~~~~~~~~~~~~~~ 388 (391)
.+++.++..++.+++
T Consensus 391 ~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 391 IAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHhCCc
Confidence 777766666555443
No 77
>TIGR00901 2A0125 AmpG-related permease.
Probab=100.00 E-value=6.1e-30 Score=232.11 Aligned_cols=317 Identities=10% Similarity=0.054 Sum_probs=233.8
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc-----CchHH-HHHHHHHHHHHHhhhhhhhc-cchHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-----GGKKV-LAWGVALWSLSTLLTPWAAT-HSTAS 74 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~~~~~~~~~a~~-~~~~~ 74 (391)
++.+|.+.+|+|+|.+|+|+..+. .+...+ .+++|+++||+ ||||. ++.+..+.++.....++... .+.+.
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 567899999999999999999766 555555 99999999998 89886 56677777777666644311 45566
Q ss_pred HHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC--------chhHHHHHHH
Q 016338 75 LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG--------ISGPFILFSS 146 (391)
Q Consensus 75 ~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g--------wr~~f~~~~~ 146 (391)
+....++.+.+.+...+...+++.|++|+|+|+++.++...+.++|.++++.+++.+.+..+ ||..|++.++
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai 165 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTAL 165 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHH
Confidence 77778888888888899999999999999999999999999999999999999999988888 9999999988
Q ss_pred HHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCc---hHHHHHHHHHHHHHHHHHHHhh
Q 016338 147 LGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLP---SWTVIIANITNNWGYFVLLSWM 223 (391)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 223 (391)
..++..+..++..||++++++. ++++.+. ...++++++++|. ++...+..++....+.....+.
T Consensus 166 ~~l~~~~~~~~~~~e~~~~~~~-~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (356)
T TIGR00901 166 LILPGLLVTLFLAKEPQEDASV-PKPLTQA------------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLT 232 (356)
T ss_pred HHHHHHHHHHHhccCCCccccc-chhHHHH------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8777665555555664332111 1111100 1125677778776 7777777777788888888999
Q ss_pred HHHHHhhhCCCcchhhHHhhhHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC-------
Q 016338 224 PIYFNTVFNVNLKQAAWFSAVPW-GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA------- 295 (391)
Q Consensus 224 ~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 295 (391)
|.|+++ +|+++++.+......+ +...++.++.+++.||+++| + .+..+.++.++........
T Consensus 233 ~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~-------~--~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 233 TLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL-------Y--ALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-------H--HHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 999998 8999999998877665 57788999999999999964 2 2333334443333322211
Q ss_pred ----CchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHH
Q 016338 296 ----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGT 343 (391)
Q Consensus 296 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 343 (391)
++.+......++.....+...+...++..+..| ++||+.+|+.+...+
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 222333334444455556677777888888766 899999999887764
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-29 Score=218.86 Aligned_cols=356 Identities=15% Similarity=0.164 Sum_probs=277.0
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhh-hhhccchHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTP-WAATHSTASLLAVRA 80 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~-~a~~~~~~~~~~~r~ 80 (391)
.+++|++++.|++|..|.+.+...++.+|.+.+++.|.+.+|+|+|+.+++++.++++++.+.. .+...++..++++-+
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lF 112 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALF 112 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999872 123478999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh-------------------cCchhHH
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-------------------IGISGPF 141 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~-------------------~gwr~~f 141 (391)
+.|.|.+....+.+.++....|+++..+.+++.+...++|..++|++++.+..+ -.||.+|
T Consensus 113 ila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 113 ILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred HHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence 999999999999999999999998999999999999999999999999987662 2488889
Q ss_pred HHHHHHHHHHHHHHhhcc-ccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHH
Q 016338 142 ILFSSLGLLWLSTWTSKV-TNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL 220 (391)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (391)
...+....+..+...... |+.++.+++. .+.+.....+++|+|+++...+..+++-..+....
T Consensus 193 l~~~~~lvll~v~~~~~k~p~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~g 256 (422)
T COG0738 193 LILAGLLVLLAVLILLSKLPDLQVAAPSL----------------GASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIG 256 (422)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCcccccc----------------cccccchHHHHHhChHHHHHHHHHHHHHhHHHHHH
Confidence 888877766655544332 2222221110 00111156889999999999999999999999999
Q ss_pred HhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhH
Q 016338 221 SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAV 300 (391)
Q Consensus 221 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (391)
+|++.|+.+..|.++.++....+..+.+.++|++++.++.+|+... +.+.+..+...+.+......++...
T Consensus 257 sfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~---------k~Laf~a~~~ill~~~~~l~~g~v~ 327 (422)
T COG0738 257 SFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE---------KYLAFYALIAILLLLAVALIGGVVA 327 (422)
T ss_pred HHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH---------HHHHHHHHHHHHHHHHHHHhcChHH
Confidence 9999999998899999999999999999999999999999999853 3334444444444444444455333
Q ss_pred HHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHH
Q 016338 301 AAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (391)
+....+.+.+.+..+|..++...+..|++...+.+ .-.+..+|+++-|++.|++.|+.| ....+......+.+-++.
T Consensus 328 -~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~-~l~maivGGAiiP~l~G~i~d~~g-~~~~~~~~pllc~lyV~~ 404 (422)
T COG0738 328 -LYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSG-LLVMAIVGGAIIPPLQGVIADMFG-IQLTFLIVPLLCYLYVLF 404 (422)
T ss_pred -HHHHHHHHHHhHHHHHHHHHHHHhccCccccccce-eeeeheecchHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHH
Confidence 34444455566677777887777777755555444 444566899999999999999998 445444444444444444
Q ss_pred HHHhc
Q 016338 381 WNLYS 385 (391)
Q Consensus 381 ~~~~~ 385 (391)
+.+..
T Consensus 405 ~~~~~ 409 (422)
T COG0738 405 FALIG 409 (422)
T ss_pred HHHHh
Confidence 44433
No 79
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=3.2e-31 Score=226.85 Aligned_cols=349 Identities=20% Similarity=0.184 Sum_probs=277.6
Q ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhch
Q 016338 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (391)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~ 89 (391)
++.+-+++++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|.......+++.++ .+++++++++|.+||+|.+..
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf--g~sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF--GNSYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH--cchhHHHHHHHHHhhhhHHHH
Confidence 345667889999999999999999999999999999999999999999999999955 499999999999999999999
Q ss_pred hhhHHHHhhhhcCccc-hhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCCCCCCC
Q 016338 90 MPAMSTLTSRWFPSHE-RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF 168 (391)
Q Consensus 90 ~~~~~~~i~~~~~~~~-rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (391)
..+..++++|.+|+++ |++++|+.-.+.++|..+||++||.+.+..|.+.+|.+.+++.++-..+.++..+++..+++.
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~ 256 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDS 256 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCccc
Confidence 9999999999998764 799999999999999999999999999999999999999999999888877776654433321
Q ss_pred CChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHH
Q 016338 169 VSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGT 248 (391)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (391)
..+..++++++++|.++.........+.........++.+..+.+..+.-+.|+.+....+.
T Consensus 257 ------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~ 318 (464)
T KOG3764|consen 257 ------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLS 318 (464)
T ss_pred ------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccc
Confidence 11223688999999999988888888777777788888888887775565899999899999
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHH---HHHHHHhhhhcccchhhhhhh
Q 016338 249 MAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVL---ITIALSLSSFSQAGYLLNIQE 325 (391)
Q Consensus 249 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 325 (391)
..++..+.|.+.||+++. |......+.+..+.........++....++- ..+++............+..|
T Consensus 319 y~ig~~lfg~la~k~~~~-------~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd 391 (464)
T KOG3764|consen 319 YAIGTNLFGKLADKYPHL-------RWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVD 391 (464)
T ss_pred hhccCchHHHHHHhcCch-------hHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcc
Confidence 999999999999999965 5445555555555555555555554433332 222222222111122222222
Q ss_pred -cccc---chhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 326 -IAPD---CAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 326 -~~~~---~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
...+ ..|..+++......+|.++||.++|.+.+..| +.+...+.+...++-.-++..++.
T Consensus 392 ~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 392 PRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred hhhccccceeeeHHHHHHHHHHHhhhccccccchheeehh-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223 67899999999999999999999999999999 888888888777776655555443
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.98 E-value=8.4e-30 Score=263.67 Aligned_cols=340 Identities=15% Similarity=0.101 Sum_probs=245.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHH---HHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhH
Q 016338 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVA---LWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAM 93 (391)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~---~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~ 93 (391)
...++..+++.+.+.++++++|+++||+|||+++..... ......+.. ...++++++++.|+++|++.+...|+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~--~~~~s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYG--FHLNSVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHhhchHH
Confidence 457888999999999999999999999999997644222 222222222 223899999999999999999999999
Q ss_pred HHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhH
Q 016338 94 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSE 173 (391)
Q Consensus 94 ~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (391)
.+++.|++|+++|++++++.+++.++|.++||++++++.+..+|++.|....+..++. ++..+..|+++.+++..+.+.
T Consensus 130 ~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 208 (1140)
T PRK06814 130 YSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTGNAAPDLKIDR 208 (1140)
T ss_pred HHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCCCCCCCCeecc
Confidence 9999999999999999999999999999999999999999999999995444444443 334444555433221111000
Q ss_pred HHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHH
Q 016338 174 LRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSG 253 (391)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 253 (391)
. .. +.....++.+.++|.++...+..+..++....+..++|.|+++.+|.++...+.+.+...++.+++.
T Consensus 209 ~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 278 (1140)
T PRK06814 209 N-II---------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS 278 (1140)
T ss_pred c-hH---------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 0 00 0011256788899999999988888888888888999999999899999999999999999999999
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc--------------------CCchhHHHHHHHHHHHhhh
Q 016338 254 YMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--------------------AKSPAVAAVLITIALSLSS 313 (391)
Q Consensus 254 ~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~ 313 (391)
++.|++.||..+++. +..+.++.++..+.+.. ..+.+...+..++.+.+.+
T Consensus 279 ~~~g~l~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 349 (1140)
T PRK06814 279 FLASKLSEGRITLLY---------VPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGG 349 (1140)
T ss_pred HHHHHHhCCceeeee---------ehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHH
Confidence 999999987665421 11111121111111111 1333444444444444445
Q ss_pred hcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHH
Q 016338 314 FSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTT 378 (391)
Q Consensus 314 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 378 (391)
...+...+..++..| +.+|+++|..+....++..+++.+.|.+.+...++...+.+.+.+.++..
T Consensus 350 ~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 350 LYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred HhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 555556677777666 89999999999999999999999999998654446666555554433333
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=1.3e-28 Score=229.47 Aligned_cols=359 Identities=15% Similarity=0.167 Sum_probs=281.5
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh---hccchHHHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA---ATHSTASLLAVRA 80 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a---~~~~~~~~~~~r~ 80 (391)
.++-+..+..-|+..++++.+...+...+.++++|.++||++|||+++.+.++..+..+..++. -..+.+.+++.-+
T Consensus 32 a~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~f 111 (524)
T PF05977_consen 32 ALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTF 111 (524)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence 3455666777889999999999999999999999999999999999999998876655544322 1247788999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
+.|++.+...|+.++++.|..|+|+..++.++.+...++...+||.++|.+...+|-.+.|.+.++..++.........+
T Consensus 112 l~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 112 LLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999999999999999999999899889999887765554444444433
Q ss_pred cCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhH
Q 016338 161 NDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAW 240 (391)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 240 (391)
+.++++ ..+++-.+ .-...++.+.++|.+....+..++.++....+...+|.+.++.+|.++...|+
T Consensus 192 ~~~~~~-~~~e~~~~------------~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGl 258 (524)
T PF05977_consen 192 PPPPSS-LPRERFFS------------ALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGL 258 (524)
T ss_pred cccccc-cchhhhhh------------hHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHH
Confidence 322211 11111111 11224555666777776666666666666677788999999999999999999
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchh
Q 016338 241 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 320 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (391)
+.+..+++.++|.++.+++.+|++++ .++..+.+..++..+.+...++.+......++.+...........
T Consensus 259 l~a~~gvGai~Gal~~~~l~~~~~~~---------~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~ 329 (524)
T PF05977_consen 259 LLAAFGVGAILGALLLPRLRRRLSSR---------RLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLN 329 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCcc---------hhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998887743 344566677777777788877777766666666655555666666
Q ss_pred hhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 321 LNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 321 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
+..++..| +.||++++++++....+..+|..+.|.+.|..| ....+.+.++..+++.++....+
T Consensus 330 t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~~~~~ 394 (524)
T PF05977_consen 330 TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIALRFP 394 (524)
T ss_pred HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777777 899999999999999999999999999999998 77788877777777766665443
No 82
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=1.9e-30 Score=248.81 Aligned_cols=265 Identities=16% Similarity=0.214 Sum_probs=214.3
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhh-------------
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA------------- 68 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~------------- 68 (391)
++.+|+++++|+++.++.|++.+.+.+++.++.++.++++||+|||+.+.++.++.+++++++++..
T Consensus 53 ~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 53 NSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred HhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 5678999999999999999999999999999999999999999999999999999999999985541
Q ss_pred ------------------------------------ccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHH
Q 016338 69 ------------------------------------THSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGI 112 (391)
Q Consensus 69 ------------------------------------~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~ 112 (391)
...+..++++|+++|+|.+..++...+++.|++|+++|++++++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 00255678999999999999999999999999999999999999
Q ss_pred HHhhhhhhHHHHhhHHHHHHhhc----------------------CchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCC
Q 016338 113 CMGGFHLGNVVGLLLTPIMLSTI----------------------GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 170 (391)
Q Consensus 113 ~~~~~~lg~~~g~~~~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (391)
.+....+|..+|+++++++.+.+ +||..|++.+++.++..+..+.+.++.|++.++.+
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~ 292 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVN 292 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccc
Confidence 99999999999999999987642 27778999888888877666555544443321111
Q ss_pred -h-hHHHHHHcCCCcc------cccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHh
Q 016338 171 -K-SELRLIQAGKSDS------VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFS 242 (391)
Q Consensus 171 -~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 242 (391)
+ ++.+..++..++. ..++....++++++||.++...+..++.....+++.+|+|.|+++++|+++.+++++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~ 372 (633)
T TIGR00805 293 VDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLI 372 (633)
T ss_pred hhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHh
Confidence 1 1100000000000 0011123567899999999999999999999999999999999999999999999998
Q ss_pred hhHHH-HHHHHHHHHHHHHHHHHhh
Q 016338 243 AVPWG-TMAVSGYMAGKASDSLIKA 266 (391)
Q Consensus 243 ~~~~~-~~~~~~~~~g~l~dr~~~~ 266 (391)
....+ +.+++.++.|++.||++.+
T Consensus 373 ~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 373 GVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred hhhhhhHHHHHHhhhhheeeeeccc
Confidence 87766 5688999999999999855
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=3.5e-29 Score=259.93 Aligned_cols=354 Identities=19% Similarity=0.123 Sum_probs=254.9
Q ss_pred hhhHHHHhCCCh--hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh-hccchHHHHHHHHH
Q 016338 5 VVPLAAKFGWSS--SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-ATHSTASLLAVRAF 81 (391)
Q Consensus 5 ~~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~~r~l 81 (391)
.+.+.++++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++..+..++..+. .+++++.+++.|++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 112 (1146)
T PRK08633 33 QNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFL 112 (1146)
T ss_pred HHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 445666676654 447999999999999999999999999999999999987766665554322 34789999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh--------c-CchhHHHHHHHHHHHHH
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--------I-GISGPFILFSSLGLLWL 152 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~--------~-gwr~~f~~~~~~~~~~~ 152 (391)
+|++.+...+...+++.|++|+++|++++++.+.+.++|.++|+.+++++.+. + +|++.+.+..+...+..
T Consensus 113 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1146)
T PRK08633 113 LGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLG 192 (1146)
T ss_pred HHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999876 2 34555544444444333
Q ss_pred HHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhC
Q 016338 153 STWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFN 232 (391)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 232 (391)
++..+..||.++......+++. ....+.....++.++++|.++...+..++..........++|.|+++.+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 264 (1146)
T PRK08633 193 LIFAYRLPKVPAAAPEVFDKKK--------YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLG 264 (1146)
T ss_pred HHHHhcCcCCCCCCcccccccc--------cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC
Confidence 4444445665543322110000 00001112346678888988888877777777777888899999999899
Q ss_pred CCcc-hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHh
Q 016338 233 VNLK-QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSL 311 (391)
Q Consensus 233 ~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (391)
.+.. ..+++.+...++.+++.++.+++.||.+++ ..+.++.++.+++.+.+....+.+...+..++.+..
T Consensus 265 ~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 335 (1146)
T PRK08633 265 LDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL---------GLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFS 335 (1146)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc---------cchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 9998 899999999999999999999999998854 233344445555555554444444444444444444
Q ss_pred hhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHH
Q 016338 312 SSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYF 375 (391)
Q Consensus 312 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~ 375 (391)
.+...+....+..+..| +.||+++|+.+.+.+++..+++.+.+.+......+...+.+.+.+.+
T Consensus 336 ~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 336 AGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 45555556677777666 89999999999999999988888777665421123444444444433
No 84
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=3.2e-28 Score=220.42 Aligned_cols=356 Identities=17% Similarity=0.131 Sum_probs=259.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh-hccchHHHHHHHHHHHhhhhchhhhHHHHh
Q 016338 19 LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA-ATHSTASLLAVRAFFGLAEGVAMPAMSTLT 97 (391)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i 97 (391)
.+.+.+++.+|.++|++..+.++||+|||..+.+..++..++.++..++ ..+++++++++|++.|+..|......+.++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5778999999999999999999999999999999999988888876554 358899999999999999999999999999
Q ss_pred hhhcCccchhhHHHHHHhhhhhhHHHHhhHHH--HHHhhcCchhHHHHHHHHHHHHHHHHhhccccCCCCCCC--CChhH
Q 016338 98 SRWFPSHERASAIGICMGGFHLGNVVGLLLTP--IMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPF--VSKSE 173 (391)
Q Consensus 98 ~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 173 (391)
.|..|.+.||..-...+.+..+|..++..++. .+.+.-.|++.+....+++++..+. ..+.||+|+..-. +++++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~-l~~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL-LPFLPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCCCcchHHHHcCCHHH
Confidence 99999999999999999999999999977763 3334556999999888877776555 4567999974211 11111
Q ss_pred H-HH-----------------HHcCCCcccccCCCccHHHhhcCCchHHHHHH-----HHHHHHHHHHHHHhhHHHHHhh
Q 016338 174 L-RL-----------------IQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIA-----NITNNWGYFVLLSWMPIYFNTV 230 (391)
Q Consensus 174 ~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 230 (391)
. +. .++.++++.++++..+++++++||..+.-... ......+......|...++++
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~- 299 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT- 299 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-
Confidence 0 00 01111111222356678999998766553222 222333445555666667777
Q ss_pred hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC-----Cc-hhHH---
Q 016338 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-----KS-PAVA--- 301 (391)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~--- 301 (391)
.|++..++-+.....++...+..+++.++.||.||| .++..+..++.+..+.+... .. .+..
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR---------pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~ 370 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR---------PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLC 370 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 799999999999999999999999999999999954 55556666655555444321 11 2222
Q ss_pred HHH-HHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHH
Q 016338 302 AVL-ITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTI 379 (391)
Q Consensus 302 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (391)
+.. +.....+.....|..+.+.+|+.| +.|+.+++.......+..++-......+.+..|+ ..|....+.+++..+
T Consensus 371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i 448 (485)
T KOG0569|consen 371 IAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLI 448 (485)
T ss_pred HHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHH
Confidence 122 222222333345667778889888 8999999999999999999999999999999994 566666666666666
Q ss_pred HHHHhccC
Q 016338 380 FWNLYSTG 387 (391)
Q Consensus 380 ~~~~~~~~ 387 (391)
..+..-++
T Consensus 449 ~~~~~lPE 456 (485)
T KOG0569|consen 449 YLYRYLPE 456 (485)
T ss_pred HHHHhCcc
Confidence 55554443
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=2.8e-28 Score=227.92 Aligned_cols=379 Identities=12% Similarity=0.083 Sum_probs=261.7
Q ss_pred chhhH-HHH--hCCChhhHHHHHHHHHHHHHHHHHhhhhhhhh-cCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHH
Q 016338 4 AVVPL-AAK--FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVR 79 (391)
Q Consensus 4 ~~~~i-~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r 79 (391)
.+|.+ .++ +|.|..+.+++.+.+.+++.++++++|+++|| +|||+++.++..+.+++.++.++ +++++.+.++|
T Consensus 32 ~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~--~~~~~~~~~~~ 109 (475)
T TIGR00924 32 ILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAM--SIYPDLIFYGL 109 (475)
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHh--cccHhHHHHHH
Confidence 45555 444 89999999999999999999999999999999 89999999999999999998854 47888899999
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCccc---hhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPSHE---RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~---rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
.+.|+|.|...+...++++|++|+++ |++++++.+...++|..+||.+++++.++.|||+.|.+.++..++..+...
T Consensus 110 ~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 110 GTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998754 888999999999999999999999999999999999997765544433332
Q ss_pred hccc---cCCCCCCCCChhHHHHHH------------------cCCCcc------------------cccCCCccHHHhh
Q 016338 157 SKVT---NDPCNSPFVSKSELRLIQ------------------AGKSDS------------------VKKRNPPSLRHLL 197 (391)
Q Consensus 157 ~~~~---~~~~~~~~~~~~~~~~~~------------------~~~~~~------------------~~~~~~~~~~~~~ 197 (391)
...+ +.|+++++.++++++... ...... +.+++..+..+..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (475)
T TIGR00924 190 AGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARN 269 (475)
T ss_pred HcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHh
Confidence 2221 222111111111110000 000000 0000001111111
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcch----hhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 016338 198 SKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ----AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLV 273 (391)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 273 (391)
|.+.+..+.+...+.+..+....+.++.+.++..+.+... .+.+.+...+..++.+++..++..|..+|+......
T Consensus 270 ~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~ 349 (475)
T TIGR00924 270 KMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTP 349 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcH
Confidence 2223444555566666777777777888877754444222 667778888888888777766666776653221111
Q ss_pred HHHHHHHHhHhhHHHHHHhhc---------CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHH
Q 016338 274 RKIMQSIGFIGPGVSLLCLNY---------AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGT 343 (391)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~ 343 (391)
.| +.++.++.+++...... ..+.++......+.........|.......+..| +.||+.+|+......
T Consensus 350 ~k--~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~ 427 (475)
T TIGR00924 350 LK--FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQA 427 (475)
T ss_pred HH--HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 11 24555555555444431 2355666666666666677777888888888777 799999999999999
Q ss_pred HHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccC
Q 016338 344 LAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 344 ~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
+|..+++.+.....+..+ +...+...+...++..++.++..+.
T Consensus 428 ~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 428 MGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988877665 6667777776666666655554443
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.97 E-value=1.7e-27 Score=218.59 Aligned_cols=350 Identities=13% Similarity=0.071 Sum_probs=248.3
Q ss_pred cchhhHHHHhCCChhhHHHH--HHHHHHHHHHHHHhhhh-hhhhcCchHHHHHHHHHH-HHHHhhhh-hhhccc-hHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIV--QSSFLWGYIFSSVIGGA-LVDKYGGKKVLAWGVALW-SLSTLLTP-WAATHS-TASLL 76 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~g~-l~dr~Grr~~~~~~~~~~-~~~~~~~~-~a~~~~-~~~~~ 76 (391)
|.+|.+.+|.|.|.+++|.+ .+.+.....+.+|+.+. ..||+||||..++...+. .......+ +...++ ..+++
T Consensus 22 p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (390)
T TIGR02718 22 DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV 101 (390)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 67899999999999999997 46778888888888855 799999999875555332 21122221 112222 33444
Q ss_pred HHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
..-.+..+..+...+...++..|..++|+++...+....+..+|..+|+...+++.+++|||.+|++.+++.++..+..+
T Consensus 102 ~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~ 181 (390)
T TIGR02718 102 GLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVL 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 55566667777788888888899998888899999999999999999999999999999999999999988877666655
Q ss_pred hccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc
Q 016338 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (391)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 236 (391)
+..||++++++. ++ +...+.++.+|+|.++......++..........+.+.|++| .|++++
T Consensus 182 ~~~~~~~~~~~~-~~----------------~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~ 243 (390)
T TIGR02718 182 WLKDRAVASPEA-PL----------------ARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLE 243 (390)
T ss_pred HcCCCCcCcccc-ch----------------hhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHH
Confidence 554443321110 00 011246788999999888888888888888888899999988 799999
Q ss_pred hhhHHhhhHHH-HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHH-HHHHh--hc---CCchhHHHHHHHHHH
Q 016338 237 QAAWFSAVPWG-TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV-SLLCL--NY---AKSPAVAAVLITIAL 309 (391)
Q Consensus 237 ~~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~---~~~~~~~~~~~~~~~ 309 (391)
+.+........ ...++.++.|++.||+++| | .+..+...... ..... .. .++.........+..
T Consensus 244 ~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-------~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (390)
T TIGR02718 244 WIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-------R--TFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGS 314 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-------H--HHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHH
Confidence 99998887764 6667789999999999965 2 22223322211 11111 11 122222222333333
Q ss_pred Hhhhhcccchhhh-hhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHH
Q 016338 310 SLSSFSQAGYLLN-IQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 310 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (391)
...+...+..... .+...+ +++++.+++.+...++|..++|.+.|.+.|+.| ++..|...+++.+++.+.
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 315 LITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHH
Confidence 3334444444444 344555 789999999999999999999999999999988 888888887777666543
No 87
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.97 E-value=2.4e-29 Score=214.20 Aligned_cols=351 Identities=19% Similarity=0.124 Sum_probs=247.1
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHH
Q 016338 15 SSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMS 94 (391)
Q Consensus 15 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~ 94 (391)
+....|.+.+.+++.+.+.++.+|.++||+|||+++++++...++...+. +.+.||..++.+|++.|+.-|.. ....
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~--~~S~~F~afv~aR~l~Gi~kgnl-~v~r 142 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLW--ALSRNFAAFVLARFLGGIFKGNL-SVIR 142 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhhhccCch-HHHH
Confidence 34558999999999999999999999999999999999999999998888 55699977777799999998876 6789
Q ss_pred HHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh---hcCchhHHHHHHH----HHHHHHHHHhhccccCCCCCC
Q 016338 95 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---TIGISGPFILFSS----LGLLWLSTWTSKVTNDPCNSP 167 (391)
Q Consensus 95 ~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~---~~gwr~~f~~~~~----~~~~~~~~~~~~~~~~~~~~~ 167 (391)
++++|..++|+|+++++.....+++|.++||.+|+++.+ ..| +.+|..... ....-.....+++||+-+.++
T Consensus 143 AiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk 221 (451)
T KOG2615|consen 143 AIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRK 221 (451)
T ss_pred HHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchh
Confidence 999999999999999999999999999999999999987 223 222332222 222212333445677644433
Q ss_pred CCChhH-HHHHHcCCCcccccCCCccHHHhhcCCchH-------HHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhh
Q 016338 168 FVSKSE-LRLIQAGKSDSVKKRNPPSLRHLLSKLPSW-------TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAA 239 (391)
Q Consensus 168 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 239 (391)
++++.. .++..+.+ .+..+......-..+||+... ...+-.+.+...+..+.++.+.+..+.+|+++.+.|
T Consensus 222 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 222 RNDEHSTLQEAADDR-LALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred hcccccchhhhhhhh-hhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 331111 11111100 000000011112334444322 233444555555555555555555677999999999
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccch
Q 016338 240 WFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGY 319 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (391)
.+.+..++.+.+.+.......||.+.. .+..+......+.-....+...+.+........+..+......+..
T Consensus 301 ~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~L 373 (451)
T KOG2615|consen 301 KVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCL 373 (451)
T ss_pred eeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHH
Confidence 999998888888888777777776532 3345556666666666677776767666666666667777777888
Q ss_pred hhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHH
Q 016338 320 LLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVT 377 (391)
Q Consensus 320 ~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 377 (391)
+.......| ++||+..|+..+.+.++.++||.+.|.+..+...-+..+..-+.+.+..
T Consensus 374 t~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 374 TSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 888888888 8999999999999999999999999998876543444444444444444
No 88
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.97 E-value=4.1e-28 Score=226.38 Aligned_cols=333 Identities=14% Similarity=0.118 Sum_probs=243.0
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhh----cCchH-HHHHHHHHHHHHHhhhhhhhccc------h
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGGKK-VLAWGVALWSLSTLLTPWAATHS------T 72 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~~~~~~~~~a~~~~------~ 72 (391)
..+.+.+++|+|+.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+. ++ .
T Consensus 22 l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~--~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTT--PDFSATGKL 99 (437)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhC--CCCCcchHH
Confidence 3456778899999999999999999999999999999998 67754 6777888888777776333 32 4
Q ss_pred HHHHHHHHHHHhhhhchhhhHHHHhhhhc-CccchhhHHHHHHhhhhhhHHHHhhHHHHHHh-------hcCchhHHHHH
Q 016338 73 ASLLAVRAFFGLAEGVAMPAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILF 144 (391)
Q Consensus 73 ~~~~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~-------~~gwr~~f~~~ 144 (391)
..+++.+++.+++.+...+...++..|.. ++|||++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~ 179 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVL 179 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHH
Confidence 56677888899988888788888889887 56889999999999999998887776655543 45899999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhH
Q 016338 145 SSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMP 224 (391)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (391)
+++.++..+..++..||++++++.. + +++.+..+.++++++||.++...+..++..........+.+
T Consensus 180 ~~l~~~~~~~~~~~~~e~~~~~~~~-~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (437)
T TIGR00792 180 ALIGVVSLIICFFGTKERYSEIPKN-I------------EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQV 246 (437)
T ss_pred HHHHHHHHHHHHcCCEecCCCCCcc-c------------ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhh
Confidence 9998887777777777755321110 0 00011223567888999999888888888777777766777
Q ss_pred HHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC-chhHHHH
Q 016338 225 IYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-SPAVAAV 303 (391)
Q Consensus 225 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 303 (391)
.|.++.++ ++.+.+.+.....++.+++.++.+++.||+++| .....+..+..+........+ +.+...+
T Consensus 247 ~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T TIGR00792 247 YYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK---------ILFAGGILLMVLGYLIFFFAGSNLPLILV 316 (437)
T ss_pred eeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHcchhHHHHHH
Confidence 77766555 455667777777889999999999999999954 333445544444444443332 3333333
Q ss_pred HHHHHHHhhhhcccchhhhhhhcc--------ccchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 304 LITIALSLSSFSQAGYLLNIQEIA--------PDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
..++.+...+...+...+...|.. ++.+|.+.|+.+....+|..+++.+.|.+.|..|
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 317 LIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334444444444555556655543 3567999999999999999999999999998766
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=7.1e-27 Score=218.48 Aligned_cols=371 Identities=15% Similarity=0.137 Sum_probs=239.0
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhh-cCchHHHHHHHHHHHHHHhhhhhhhccchHH-HHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWAATHSTAS-LLAVRAF 81 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~r~l 81 (391)
+...+++++|.+.++.+++.+.+.....+..+++|+++|| +||||++.++.+++.++.+.++++ ++... ++++|.+
T Consensus 37 l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~--~~~~~ll~~~~~l 114 (489)
T PRK10207 37 LAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS--LLKPDLIFIALGT 114 (489)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh--ccchhHHHHHHHH
Confidence 4456788999999999999999998888999999999999 999999999999999999998554 55443 5589999
Q ss_pred HHhhhhchhhhHHHHhhhhcCcc--chhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcc
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 159 (391)
+|+|.|...|...+++.|.+|++ +|+++++++..+.++|..+||.+++++.++.|||+.|++.++ ..+..++.+...
T Consensus 115 ~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~ 193 (489)
T PRK10207 115 IAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFAC 193 (489)
T ss_pred HHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHc
Confidence 99999999999999999999877 457899999999999999999999999999999999998654 333333333222
Q ss_pred ccCCCCC---C-CCChhHHHHH----------------HcCCCc-----------------ccccCCCccHHHhhcCCch
Q 016338 160 TNDPCNS---P-FVSKSELRLI----------------QAGKSD-----------------SVKKRNPPSLRHLLSKLPS 202 (391)
Q Consensus 160 ~~~~~~~---~-~~~~~~~~~~----------------~~~~~~-----------------~~~~~~~~~~~~~~~~~~~ 202 (391)
++..++. + +.+.+..... .+.... .++++. .+.+|+|.+
T Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~----~~~~r~r~~ 269 (489)
T PRK10207 194 RGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKL----DKTGRNKMF 269 (489)
T ss_pred chhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHH
Confidence 3221111 1 1001100000 000000 000000 145566655
Q ss_pred HHHHHH--HHHHHHHHHHHHHhhHHHHHhhhCCCc----chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 016338 203 WTVIIA--NITNNWGYFVLLSWMPIYFNTVFNVNL----KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI 276 (391)
Q Consensus 203 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 276 (391)
....+. .......+....+.++.+.++..+.+. .....+.....+..++..++.+++.||+++|+.......|.
T Consensus 270 ~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~ 349 (489)
T PRK10207 270 VAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKF 349 (489)
T ss_pred HHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHH
Confidence 443322 444555566666777888875333321 12233444455666677888899999999875322222232
Q ss_pred HHHHHhHhhHHHHHH-------hhcC---CchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHH
Q 016338 277 MQSIGFIGPGVSLLC-------LNYA---KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLA 345 (391)
Q Consensus 277 ~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g 345 (391)
. .++++.++++.. .... .+.++.....++......+..+.......+..| +.++.++|+.+....+|
T Consensus 350 ~--~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig 427 (489)
T PRK10207 350 T--LGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAA 427 (489)
T ss_pred H--HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 2 333333333321 1111 123444444444444555555555555555445 89999999999999999
Q ss_pred HHHHHHHhhHhhc---------cccchhHHHHHHHHHHHHHHHHHHH
Q 016338 346 AIISTIGTGYFVQ---------WLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 346 ~~i~~~~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
+.++..+...... ..+.+...|...+...+++.++++.
T Consensus 428 ~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~ 474 (489)
T PRK10207 428 FLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMAL 474 (489)
T ss_pred HHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888865531 0112556666666666555555444
No 90
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=4.7e-27 Score=199.02 Aligned_cols=368 Identities=17% Similarity=0.125 Sum_probs=271.2
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
.+.|.+.+.+|.+..|..++......+..+++..+|..+|++|||+.+....+...+...+. ..++|+..+++.|.+.
T Consensus 99 ~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is--~~spnf~~L~~f~~l~ 176 (528)
T KOG0253|consen 99 LILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVIS--GASPNFASLCVFRALW 176 (528)
T ss_pred HHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhh--cCCCCeehhhHHHHHH
Confidence 35677888899999999999999999999999999999999999999999999999999998 4569999999999999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccC
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
|+|.|+ .|...++-.|..|..+|...+-+. ..+.+|.+....+.-.+..++||||.....+.+..+.+.. .+++||+
T Consensus 177 ~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f-~~w~~ES 253 (528)
T KOG0253|consen 177 GFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF-LVWVYES 253 (528)
T ss_pred hccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH-HhhcccC
Confidence 999999 799999999999999998887666 9999999999999999999999999988888655555444 5567898
Q ss_pred CCCCCCCChhHHH--H------------------------HHcC------CCcccccCCCccHHHhhcC---CchHHHHH
Q 016338 163 PCNSPFVSKSELR--L------------------------IQAG------KSDSVKKRNPPSLRHLLSK---LPSWTVII 207 (391)
Q Consensus 163 ~~~~~~~~~~~~~--~------------------------~~~~------~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 207 (391)
|+-.-...++++. . .+++ ...+..++...+..+++.. ++......
T Consensus 254 pRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~ 333 (528)
T KOG0253|consen 254 PRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWR 333 (528)
T ss_pred cchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHH
Confidence 8732111110000 0 0000 0000112223344444432 23344455
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhh-------------------CCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 016338 208 ANITNNWGYFVLLSWMPIYFNTVF-------------------NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGY 268 (391)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 268 (391)
.++...+.+++..-......+.+. ..+...--.=..+.......|.++.+++.||+|
T Consensus 334 iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlG---- 409 (528)
T KOG0253|consen 334 IWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLG---- 409 (528)
T ss_pred HHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhc----
Confidence 566666666666555554444321 011111111233456778899999999999999
Q ss_pred chhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHH
Q 016338 269 SLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAI 347 (391)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ 347 (391)
||..+..+++.++++.+.+....+......+.+..-.+....+...+.+..|++| ..|+++.|....+.++|++
T Consensus 410 -----RKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI 484 (528)
T KOG0253|consen 410 -----RKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGI 484 (528)
T ss_pred -----chhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhh
Confidence 6688888999999988888777777666677777777777788889999999999 8999999999999999999
Q ss_pred HHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccC
Q 016338 348 ISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 348 i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
+.|.+. ...+. . ...+..+.+.+++++.+...+++.+
T Consensus 485 ~~p~iA-~~~e~-s-~sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 485 FSPVIA-MRAEL-S-TSLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hhhHHH-HHhcc-c-eeehHHHHHHHHHHHHHHheeeeec
Confidence 999998 44443 2 4455566666666666666655543
No 91
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=5.8e-26 Score=202.91 Aligned_cols=367 Identities=14% Similarity=0.062 Sum_probs=259.7
Q ss_pred ccchhhHHHHhCCChhh-HHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSF-LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
+.+.|.+.+|+|+|++| .|.+.++++.+|++++++.|.++||+|.|+++.++.+.+++..++.+++ +++..+.+.|+
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa--~Sl~~L~i~R~ 123 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG--TSVWHMQLMEV 123 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 45778999999999999 9999999999999999999999999999999999999999999999665 89999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHH--HHHHHHHHHHHhhc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILF--SSLGLLWLSTWTSK 158 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~--~~~~~~~~~~~~~~ 158 (391)
+.|++.|... ....++.+|+|+++|+++.++..++..+|.+++++++++ ...+|||+-+.+. +..+....+++-++
T Consensus 124 llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~ 201 (511)
T TIGR00806 124 FYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALF 201 (511)
T ss_pred HHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998 999999999999999999999999999999999999999 5578999854442 23333444455556
Q ss_pred cccCCCCCCCCChh-----HHHHHHcCCCccc--c----c--------CCCccHHHhhcCCchHHHHHHHHHHHHHHHHH
Q 016338 159 VTNDPCNSPFVSKS-----ELRLIQAGKSDSV--K----K--------RNPPSLRHLLSKLPSWTVIIANITNNWGYFVL 219 (391)
Q Consensus 159 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (391)
+|..++..-.++++ ...+.++..+++. + + .-..++++..+||.+....+-+.+...+++-+
T Consensus 202 LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv 281 (511)
T TIGR00806 202 LKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLI 281 (511)
T ss_pred CCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHH
Confidence 66443321000000 0000000000000 0 0 01124456678899998888888888888888
Q ss_pred HHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchh
Q 016338 220 LSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA 299 (391)
Q Consensus 220 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (391)
.+|.-...++..+-...-.|..-++..+.+++..+..|++-.+..+. ....+.+..++.+..++++...++.+
T Consensus 282 ~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~~t~~Iw 354 (511)
T TIGR00806 282 TYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMSQSHDIW 354 (511)
T ss_pred HHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhhcccchH
Confidence 88887777664332222455666666777888888888886555432 34555666666666677888888888
Q ss_pred HHHHHHHHHHHhhhhcccchhhhhh-hccccchhHHHHHHHHHHHHHHHHHHHHh----hHhhc---cccchhHHHHHHH
Q 016338 300 VAAVLITIALSLSSFSQAGYLLNIQ-EIAPDCAGFLHGIANSAGTLAAIISTIGT----GYFVQ---WLGSFQAFLTVTA 371 (391)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~g~~i~~~~~----g~l~~---~~g~~~~~~~~~~ 371 (391)
...+..++......+..+.....+. ++..+..|...|+++.+..+-..+-..+. |.=.| .+--|...|.+.+
T Consensus 355 ~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~ 434 (511)
T TIGR00806 355 VLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLS 434 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHH
Confidence 8877776666665555555444444 44446779999998888777666655444 22112 1212445566666
Q ss_pred HHHHHHHH
Q 016338 372 GLYFVTTI 379 (391)
Q Consensus 372 ~~~~~~~~ 379 (391)
.+.++..+
T Consensus 435 ~i~~~~~~ 442 (511)
T TIGR00806 435 IICFFGAG 442 (511)
T ss_pred HHHHHHHH
Confidence 55555544
No 92
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=9.5e-26 Score=213.53 Aligned_cols=348 Identities=17% Similarity=0.144 Sum_probs=244.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHH
Q 016338 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTL 96 (391)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~ 96 (391)
++.+|+.+...++..+++++.|+++|++|||+.+.++.+.+.++.+++++ ++|+++++++|+++|+|.|......+.+
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~--a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIAL--APSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 35599999999999999999999999999999999999999999999954 4999999999999999999999999999
Q ss_pred hhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh-cCchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChh-HH
Q 016338 97 TSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKS-EL 174 (391)
Q Consensus 97 i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 174 (391)
++|..|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. ..+.||+|+..-+..+. +.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a 245 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA 245 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH
Confidence 99999999999999999999999999996555544332 48999999988888888777 77889998743221111 10
Q ss_pred -HH---HHc-CCCc---------------ccccCCCccHHHhhc----CCchHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 016338 175 -RL---IQA-GKSD---------------SVKKRNPPSLRHLLS----KLPSWTVIIANITNNWGYFVLLSWMPIYFNTV 230 (391)
Q Consensus 175 -~~---~~~-~~~~---------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (391)
+. ... ..++ .........++++++ ++.+....+..+.+..+......|.+.++++
T Consensus 246 ~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~- 324 (513)
T KOG0254|consen 246 KRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS- 324 (513)
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-
Confidence 00 000 0000 000011112344443 2223344455555555556666788888777
Q ss_pred hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC----C--------ch
Q 016338 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA----K--------SP 298 (391)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--------~~ 298 (391)
.|.+... .......++...++..+..++.||+| ||..+..+...+.++..++... . ..
T Consensus 325 ~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~g---------Rr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (513)
T KOG0254|consen 325 AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFG---------RRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAG 394 (513)
T ss_pred cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhc---------cHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchh
Confidence 4665433 44555667778888888899999998 5566677777777766655421 0 11
Q ss_pred hHHHH-HHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHH
Q 016338 299 AVAAV-LITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFV 376 (391)
Q Consensus 299 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 376 (391)
+..+. ..+....+.....+..+.+..|.+| +.|+++.++..........+-......+.+..+ ....|........+
T Consensus 395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~-~~~~f~~f~~~~~~ 473 (513)
T KOG0254|consen 395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG-IGGTFGYFGGICLL 473 (513)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchHHHHHHHHHH
Confidence 22222 2333333344445556678899999 899999999999999988877777777766644 23444444444444
Q ss_pred HHH
Q 016338 377 TTI 379 (391)
Q Consensus 377 ~~~ 379 (391)
...
T Consensus 474 ~~~ 476 (513)
T KOG0254|consen 474 SLI 476 (513)
T ss_pred HHH
Confidence 444
No 93
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.95 E-value=5.4e-25 Score=204.56 Aligned_cols=344 Identities=14% Similarity=0.122 Sum_probs=243.8
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
..++.+.+|+|- .....|+.+.+.++.+++.++.|+++|.+|||..++.+.++..+|.+++ +.++|...++.+..+.
T Consensus 65 ~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~--atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 65 SILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVC--ATAQNMNTFIAGMVLY 141 (599)
T ss_pred HHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHh--hcCCcHHHHHHHHHHH
Confidence 456889999985 4788999999999999999999999999999999999999999999999 5569999999999999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccC
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
|+|.|... .....++|..|.|.|+...++.....-.....++.++..+..+.+|||.|++..++..+.++..+++..++
T Consensus 142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99987764 45666899999999998888777666666667777877777677999999999888776555544433322
Q ss_pred CCC--CCCC-C-hhHHHHHH--------------------cCC-Ccc-----------------------c---ccCCCc
Q 016338 163 PCN--SPFV-S-KSELRLIQ--------------------AGK-SDS-----------------------V---KKRNPP 191 (391)
Q Consensus 163 ~~~--~~~~-~-~~~~~~~~--------------------~~~-~~~-----------------------~---~~~~~~ 191 (391)
+++ +.++ + +++.++.+ ... ..+ | ..+.+.
T Consensus 221 ~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl 300 (599)
T PF06609_consen 221 PRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPL 300 (599)
T ss_pred chhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCc
Confidence 221 1111 1 11111111 000 000 1 111222
Q ss_pred cHHHhhcCC-chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc---hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 016338 192 SLRHLLSKL-PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK---QAAWFSAVPWGTMAVSGYMAGKASDSLIKAG 267 (391)
Q Consensus 192 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 267 (391)
-..+++|++ .+....+..++....++....+.|+.....++-++. ..++.....+.+..++.++.|.+..++++
T Consensus 301 ~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~-- 378 (599)
T PF06609_consen 301 FPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRH-- 378 (599)
T ss_pred CCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccc--
Confidence 345788874 566666777788888888889999988887777653 56777788888888999999999988875
Q ss_pred cchhHHHHHHHHHHhHhhHHHHHHhh--cCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHH
Q 016338 268 YSLTLVRKIMQSIGFIGPGVSLLCLN--YAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTL 344 (391)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 344 (391)
.|..+.++.+.+..+.-++. ..++....+...++.....+..........+...| ++-+++.|+..+++.+
T Consensus 379 ------~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~ 452 (599)
T PF06609_consen 379 ------IKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSI 452 (599)
T ss_pred ------hhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHH
Confidence 44555555555554333332 22333333344444444444333344444455555 8999999999999999
Q ss_pred HHHHHHHHhhHhhc
Q 016338 345 AAIISTIGTGYFVQ 358 (391)
Q Consensus 345 g~~i~~~~~g~l~~ 358 (391)
|+.++..+...+..
T Consensus 453 GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 453 GGSIGYAIYNAIFT 466 (599)
T ss_pred hhHHHHHHHHHHHH
Confidence 99999998877654
No 94
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.95 E-value=5.8e-24 Score=192.87 Aligned_cols=361 Identities=18% Similarity=0.167 Sum_probs=261.9
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcC-chHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG-GKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
|.+|..-++.|.|.+|+|.+.+...+...++++++|.++||++ +||.+.+..++.++..... ...++++.++..-++
T Consensus 23 p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~--~~~~~f~~~~~~~~l 100 (400)
T PF03825_consen 23 PYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL--AFSSSFWWLFVIMLL 100 (400)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH--HHhccHHHHHHHHHH
Confidence 4566778888999999999999999999999999999999986 5677777777776665555 445889888888888
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhH-HHHHHhhcCc---hhHHHHHHHHHHHHHHHHhh
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLL-TPIMLSTIGI---SGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~-~~~l~~~~gw---r~~f~~~~~~~~~~~~~~~~ 157 (391)
..+......|...++..+... ++++-.|-.....++|..++... +..+.+..++ ...+++.+..+++......
T Consensus 101 ~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l- 177 (400)
T PF03825_consen 101 FSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFAL- 177 (400)
T ss_pred HHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH-
Confidence 888888888888898888874 55666777788888888887654 2333333332 3456666655554444333
Q ss_pred ccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcch
Q 016338 158 KVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (391)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (391)
.+|+.|.+++.+++. ++....+..+++|||++....+..++.........++.+.|+++..|.+...
T Consensus 178 ~lp~~~~~~~~~~~~-------------~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~ 244 (400)
T PF03825_consen 178 FLPKTPPKRSAKESV-------------KKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST 244 (400)
T ss_pred hCCCCccccccCCCc-------------ccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 346655222111110 1112224468999999999999999999999999999999999954478788
Q ss_pred hhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC-CchhHHHHHHHH----HHHhh
Q 016338 238 AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-KSPAVAAVLITI----ALSLS 312 (391)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~ 312 (391)
.+.+.++..+..++.-...+++.+|+| .+.++.++.+..++-..++... ++.+.......+ -+...
T Consensus 245 ~g~~~~l~~~aEi~~f~~~~~~~~r~g---------~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf 315 (400)
T PF03825_consen 245 IGILWALGVVAEIPFFFFSGRFLKRFG---------IKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTF 315 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---------HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHH
Confidence 888888877888888889999999998 4567778888888888777766 444433333332 23333
Q ss_pred hhcccchhhhhhhccc-cchhHHHHHHHHHH-HHHHHHHHHHhhHhhccccc-----hhHHHHHHHHHHHHHHHHHHHhc
Q 016338 313 SFSQAGYLLNIQEIAP-DCAGFLHGIANSAG-TLAAIISTIGTGYFVQWLGS-----FQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~-~~g~~i~~~~~g~l~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
+........++++..| +.|++++++++... .+|..+|..++|++.|+.|. +...+.+.+++.++..+++.+..
T Consensus 316 ~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~f 395 (400)
T PF03825_consen 316 GLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILF 395 (400)
T ss_pred HHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4455666677777666 89999999988864 68999999999999998772 33456666666666666777666
Q ss_pred cCccc
Q 016338 386 TGERV 390 (391)
Q Consensus 386 ~~~~~ 390 (391)
|++++
T Consensus 396 k~~~~ 400 (400)
T PF03825_consen 396 KPKHN 400 (400)
T ss_pred cCCCC
Confidence 66653
No 95
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=1.1e-24 Score=203.75 Aligned_cols=384 Identities=14% Similarity=0.065 Sum_probs=277.5
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhc----cchHHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT----HSTASLLA 77 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~----~~~~~~~~ 77 (391)
+...|++++++|+|.+|++++.++. ......+++.|++.||+|||+++.++.+++.++.++++++.. ++++.+++
T Consensus 47 sv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l 125 (591)
T PTZ00207 47 NLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSV 125 (591)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHH
Confidence 4567889999999999999999874 445677889999999999999999999999999999966422 68999999
Q ss_pred HHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhh
Q 016338 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 157 (391)
.|++.|+|.+...+.....+.+|+| ++||++.|+.....++|.++.+.+...+.+ .+|+..|++.+++.++..++.+.
T Consensus 126 ~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 126 YNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998999999999996 889999999999999999864444443333 46888999999998887777777
Q ss_pred ccccCCCCCC-----CCChhHHH--------------------------------------------------------H
Q 016338 158 KVTNDPCNSP-----FVSKSELR--------------------------------------------------------L 176 (391)
Q Consensus 158 ~~~~~~~~~~-----~~~~~~~~--------------------------------------------------------~ 176 (391)
+.+++|.... +.+++++. .
T Consensus 204 ~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~ 283 (591)
T PTZ00207 204 FMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTV 283 (591)
T ss_pred heeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 7666543211 01111111 0
Q ss_pred H------H--------------cCCCc----------------cc-------c---cCCCccHHHhhcCCchHHHHHHHH
Q 016338 177 I------Q--------------AGKSD----------------SV-------K---KRNPPSLRHLLSKLPSWTVIIANI 210 (391)
Q Consensus 177 ~------~--------------~~~~~----------------~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~ 210 (391)
. . ++.++ +. + .+...++++.+++..+|.+.+.++
T Consensus 284 ~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~ 363 (591)
T PTZ00207 284 IVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIF 363 (591)
T ss_pred HHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHH
Confidence 0 0 00000 00 0 000125677788889999999999
Q ss_pred HHHHHHHHHHHhhHHHHHhhhCCCcch--hhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHH
Q 016338 211 TNNWGYFVLLSWMPIYFNTVFNVNLKQ--AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 288 (391)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (391)
+.........+-+.+..+..-|.+.+. ...+.+..++.+.+|++..|.+.....+|+..+...|...+.+..+ +.+.
T Consensus 364 cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~ 442 (591)
T PTZ00207 364 CCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIIT 442 (591)
T ss_pred HhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHH
Confidence 988888888888888888832763333 3337788899999999999999855544432211224444445554 4444
Q ss_pred HHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHH-HHHhhHhhcccc------
Q 016338 289 LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIIS-TIGTGYFVQWLG------ 361 (391)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~-~~~~g~l~~~~g------ 361 (391)
.+++...-....+.+..++.+...+..++......+|++.++-|+-+-+.....-+|..+- -.+.|.++|+-.
T Consensus 443 ~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~ 522 (591)
T PTZ00207 443 MLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQD 522 (591)
T ss_pred HHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4444333232455666667777778888888899999888999998888888888888776 578888987522
Q ss_pred ------chhHHHHHHHHHHHHHHHHHHHhccCcc
Q 016338 362 ------SFQAFLTVTAGLYFVTTIFWNLYSTGER 389 (391)
Q Consensus 362 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
-+...|.+.++.++.+.+....+..|.|
T Consensus 523 ~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 523 VCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred eeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 2677888888888888887666554433
No 96
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.95 E-value=1.9e-24 Score=205.69 Aligned_cols=330 Identities=15% Similarity=0.104 Sum_probs=240.1
Q ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhch
Q 016338 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (391)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~ 89 (391)
++++.+.....+..+++.+|..+|++++|+++||+|||+++++++++..++.++. ++++|++.+++.|++.|++.+..
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~--a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT--AFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH--HHhCcHHHHHHHHHHHHhhccch
Confidence 4556678889999999999999999999999999999999999999999999999 55599999999999999999999
Q ss_pred hhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCCCCCCCC
Q 016338 90 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFV 169 (391)
Q Consensus 90 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (391)
......++.|++++|+|+.+..+ ......+..+++..++++.+ +||+.+++..++..+..+. ++..||+|+.....
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHc
Confidence 99999999999999999999999 77777788888888888877 8999999999998877666 66667888753322
Q ss_pred ChhH--HHHHHc-------CCCc--------------ccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHH
Q 016338 170 SKSE--LRLIQA-------GKSD--------------SVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIY 226 (391)
Q Consensus 170 ~~~~--~~~~~~-------~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (391)
.+.+ .+..++ .... ....+++..+.++++.|++....+......+.......-++..
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~ 344 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLN 344 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhh
Confidence 2111 010000 0000 0011122456777887765555444444443333222222222
Q ss_pred HHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchh---HHHH
Q 016338 227 FNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPA---VAAV 303 (391)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 303 (391)
... +|.+. .......+..........+...||.| |+.....+.....++.+......... ...+
T Consensus 345 ~~~-lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~g---------R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (521)
T KOG0255|consen 345 VSG-LGGNI---YLNFTLSGLVELPAYFRNGLLLPEFG---------RRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWI 411 (521)
T ss_pred hhh-cCchH---HHHHHHHHHHHhhHHHHHHHHHHHhC---------cHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Confidence 222 34433 22333334466677777789999997 55666677777777766665544322 4566
Q ss_pred HHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 016338 304 LITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 358 (391)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 358 (391)
...++.+.........+.+..|..| ..|+.+.+..+....++++++|.+.-....
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 412 LPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6666666666666667888999999 799999999999999999999998866555
No 97
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.94 E-value=6e-23 Score=188.45 Aligned_cols=370 Identities=14% Similarity=0.132 Sum_probs=249.3
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhh----hcCchHHHHHH-HHHHHHHHhhhhhhhccchH----
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD----KYGGKKVLAWG-VALWSLSTLLTPWAATHSTA---- 73 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~~~~~-~~~~~~~~~~~~~a~~~~~~---- 73 (391)
+.++.+.+++|.+..+.+++..+..+...+.+|+.|.++| |+||||.++++ .....++..+.+++ ++..
T Consensus 25 ~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~--~~~~~~~~ 102 (477)
T TIGR01301 25 SLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA--ADIGHLFG 102 (477)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC--chhhhhcc
Confidence 3456678899999999999999999999999999999999 59999988775 55556666666443 4432
Q ss_pred -------------HHHHHHHHHHhhhhchhhhHHHHhhhhcCccch--hhHHHHHHhhhhhhHHHHhhHHHHH--Hhhc-
Q 016338 74 -------------SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHER--ASAIGICMGGFHLGNVVGLLLTPIM--LSTI- 135 (391)
Q Consensus 74 -------------~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r--g~~~~~~~~~~~lg~~~g~~~~~~l--~~~~- 135 (391)
.++++-.+..++.....+...++++|..|+++| +.+.++.+...++|..+|+.++++. .+.+
T Consensus 103 ~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~ 182 (477)
T TIGR01301 103 DNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFP 182 (477)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 223333444557777888899999999998765 6899999999999999999999875 2222
Q ss_pred ------------CchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcC----
Q 016338 136 ------------GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSK---- 199 (391)
Q Consensus 136 ------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 199 (391)
+.|..|++.++..++..+...+..+|.|..+++..+++ +.+++++++....+++++++
T Consensus 183 ~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~m 256 (477)
T TIGR01301 183 FTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS------EAAPPSKHGEEAFFGELFGAFKYL 256 (477)
T ss_pred cccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh------hcccccccchhhhHHHHHHHHHHC
Confidence 56889999888888888888888888764322111100 00011111111233444332
Q ss_pred -CchHHHHHHHHHHHHHHHHHHHhhHHHHHh-hhCCCcc------hh---h-HHhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 016338 200 -LPSWTVIIANITNNWGYFVLLSWMPIYFNT-VFNVNLK------QA---A-WFSAVPWGTMAVSGYMAGKASDSLIKAG 267 (391)
Q Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~------~~---~-~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 267 (391)
|..+.+++..++.+++++.+..|.+.|..+ .++.++. +. | +-.....+...+.+++..++.+|+|+|
T Consensus 257 P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~- 335 (477)
T TIGR01301 257 PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG- 335 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 578899999999999999999999999874 4554321 11 2 223344445556666777778887742
Q ss_pred cchhHHHHHHHHHHhHhhHHHHHHhhcCCc---------------------hhHHHHHHHHHHHhhhhcccchhhhhhhc
Q 016338 268 YSLTLVRKIMQSIGFIGPGVSLLCLNYAKS---------------------PAVAAVLITIALSLSSFSQAGYLLNIQEI 326 (391)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (391)
|.....+.++.++++....+.++ .+.....+...+..........++.+.+.
T Consensus 336 -------k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~ 408 (477)
T TIGR01301 336 -------KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIR 408 (477)
T ss_pred -------hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHH
Confidence 23333443344433333321110 13333334444444455556666776665
Q ss_pred cc---cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc-chhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 327 AP---DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG-SFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 327 ~~---~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
.+ +..|..+|+.|.+..+.+.+.....|.+.+..| +....+.+.++..+++.++.+..-++.
T Consensus 409 ~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~ 474 (477)
T TIGR01301 409 SSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRP 474 (477)
T ss_pred ccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCC
Confidence 55 456999999999999999999999999777666 456678888888888877766554443
No 98
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.93 E-value=2.8e-22 Score=185.23 Aligned_cols=357 Identities=17% Similarity=0.090 Sum_probs=270.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHH-HHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHH
Q 016338 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAW-GVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMST 95 (391)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~ 95 (391)
+..++..++..+..++..|+.|.++|+-|+||.++. ...+..+.+.+..+...++++...+.-++.-++.+......++
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346788999999999999999999999988765544 4455555666664443345555566666667788888889999
Q ss_pred HhhhhcCccch--------------------------hhHHHHHHhhhhhhHHHHhhHHHHHHhh--------cCchhHH
Q 016338 96 LTSRWFPSHER--------------------------ASAIGICMGGFHLGNVVGLLLTPIMLST--------IGISGPF 141 (391)
Q Consensus 96 ~i~~~~~~~~r--------------------------g~~~~~~~~~~~lg~~~g~~~~~~l~~~--------~gwr~~f 141 (391)
++.|..+++++ ++..+.-.....+|..+.-.+.-.+... .+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999998888 8998888888888888877766554321 2358889
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCCChhHH-HHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHH
Q 016338 142 ILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSEL-RLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL 220 (391)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (391)
.+.++.-++..+..+++.||.|+.++..+..+. .. .-++..+.++++.|+|......+.+++..-+...+.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~--------g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~ 301 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRF--------GFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTII 301 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHH--------HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 999999889899999999988763222111110 00 001122356777788999999999999999999999
Q ss_pred HhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhh-HHHHHHhh------
Q 016338 221 SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP-GVSLLCLN------ 293 (391)
Q Consensus 221 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------ 293 (391)
.....|.++++|++..+...+.....+.+++|.++.|++.||+|.| ++..+..+.... .+....+.
T Consensus 302 ~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k-------~~~~l~~~l~~~~~i~~~g~~G~~~~~ 374 (477)
T PF11700_consen 302 SFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPK-------TKRTLLISLILWIIIPLYGLFGFWPSF 374 (477)
T ss_pred HHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------hhHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999999976 334444443333 22222221
Q ss_pred -cCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHH
Q 016338 294 -YAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTA 371 (391)
Q Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~ 371 (391)
..++.+..+++.++.+.+.+...+..-++..++.| ++.+..+|+++......+.+||.+.|.+.|..|+.+..+....
T Consensus 375 ~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~ 454 (477)
T PF11700_consen 375 FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLL 454 (477)
T ss_pred cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 13455566666666666666666666666677666 7889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCc
Q 016338 372 GLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 372 ~~~~~~~~~~~~~~~~~ 388 (391)
++.+++.++....+.++
T Consensus 455 ~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 455 VLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHHHHhhccchh
Confidence 99999998887766544
No 99
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=4.2e-25 Score=192.86 Aligned_cols=361 Identities=19% Similarity=0.209 Sum_probs=258.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhcc-----chHHHHHHHHHHHhhhhc
Q 016338 14 WSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH-----STASLLAVRAFFGLAEGV 88 (391)
Q Consensus 14 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~-----~~~~~~~~r~l~G~g~~~ 88 (391)
.++...+.+..+..+|..+||++.|++.||+|||+++...+++..++++++++...+ -++++.+.|++.|+|.|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 345667899999999999999999999999999999999999999999987554322 257889999999999999
Q ss_pred hhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh---------------cCchhHHHHHHHHHHHHHH
Q 016338 89 AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST---------------IGISGPFILFSSLGLLWLS 153 (391)
Q Consensus 89 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~---------------~gwr~~f~~~~~~~~~~~~ 153 (391)
-+|.+.+..+|...+++||...+...+..+.|...|.+++-.+..- .=||..+.+.+++++....
T Consensus 161 DYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly 240 (538)
T KOG0252|consen 161 DYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY 240 (538)
T ss_pred CCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988887665431 1299999997777766544
Q ss_pred HHhhccccCCCCCCCCChh-------HHHHHHc-----CCCcccccCCC---ccHHHhhcC---CchHHHHHHHHHHHHH
Q 016338 154 TWTSKVTNDPCNSPFVSKS-------ELRLIQA-----GKSDSVKKRNP---PSLRHLLSK---LPSWTVIIANITNNWG 215 (391)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~ 215 (391)
. ....||+++-+...+++ .++..+. +..++..+.+. ..+...+.. +.....+..++..-.+
T Consensus 241 ~-Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDia 319 (538)
T KOG0252|consen 241 F-RLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIA 319 (538)
T ss_pred h-hhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3 44567765422100000 0000000 00000111111 112222222 4455667778888888
Q ss_pred HHHHHHhhHHHHHhhhCCCcchhhH--------HhhhHH-HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhH
Q 016338 216 YFVLLSWMPIYFNTVFNVNLKQAAW--------FSAVPW-GTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPG 286 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~-~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~ 286 (391)
++....+....++. .|+.+.+..+ ...+.. ...++|-.+...++|++| |+++.+.++.++.
T Consensus 320 fy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG---------Rk~iq~~GF~~~~ 389 (538)
T KOG0252|consen 320 FYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG---------RKYIQLMGFFIMT 389 (538)
T ss_pred hhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh---------hHHHHHhhHHHHH
Confidence 88888888888876 5665544433 111111 122235556667899999 6788888999999
Q ss_pred HHHHHhhcCCc----hhHHHHHHHHHHHhhhhc-ccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc--
Q 016338 287 VSLLCLNYAKS----PAVAAVLITIALSLSSFS-QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ-- 358 (391)
Q Consensus 287 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~-- 358 (391)
+..+.+....+ .....++..+..++..+. ......+..|.+| +.|++..|+....+-.|++++.....++.+
T Consensus 390 i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~ 469 (538)
T KOG0252|consen 390 IFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN 469 (538)
T ss_pred HHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc
Confidence 88888776544 233334444444444433 4446677889999 899999999999999999999999999999
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 359 ---WLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 359 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
..| ....+++.+.+..++.+..+++..
T Consensus 470 yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pE 499 (538)
T KOG0252|consen 470 YPPNIG-VRNVFIILAGCMLLGILFTLLIPE 499 (538)
T ss_pred CCcccc-chHHHHHHHHHHHHhHheeEEeec
Confidence 666 889999999999999988877763
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.93 E-value=3.2e-23 Score=194.98 Aligned_cols=371 Identities=17% Similarity=0.141 Sum_probs=226.1
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhh-cCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G 83 (391)
.+.+++++|.|.++.+++.+.+........+++|+++|| +|||+.+.++.++..++..+++++ .++.+.+.++|+++|
T Consensus 45 ~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~-~~~~~~l~~~~~l~g 123 (500)
T PRK09584 45 AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS-GHDAGIVYMGMATIA 123 (500)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHH
Confidence 345678999999999999988887767777899999999 599999999999999998888543 235667778999999
Q ss_pred hhhhchhhhHHHHhhhhcCccc--hhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHH---HHHhhc
Q 016338 84 LAEGVAMPAMSTLTSRWFPSHE--RASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL---STWTSK 158 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~--rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~---~~~~~~ 158 (391)
+|.|...+...+++.|++|+++ |+.++++++.+.++|..+||.+++++.++.|||+.|.+.++..++.. +.....
T Consensus 124 ig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~ 203 (500)
T PRK09584 124 VGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRW 203 (500)
T ss_pred HhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999988999999999998653 45688999999999999999999999999999999999775444432 222333
Q ss_pred cccCCCCCCCCChhHHHHH---------------HcCCCccccc--------------CCCccHHHhhcCCchHHHHHHH
Q 016338 159 VTNDPCNSPFVSKSELRLI---------------QAGKSDSVKK--------------RNPPSLRHLLSKLPSWTVIIAN 209 (391)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~ 209 (391)
.+|.+++.+..+.+..... .....+..++ ......++..|+ +.+.. +..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~ 281 (500)
T PRK09584 204 VKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAARR-KMIVA-FIL 281 (500)
T ss_pred hccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHH-HHHHH-HHH
Confidence 3333211111000000000 0000000000 000000111122 22222 222
Q ss_pred HHHHHHHHHHHHhhHHHHHh--hhCCCc------chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 016338 210 ITNNWGYFVLLSWMPIYFNT--VFNVNL------KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 281 (391)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~--~~g~~~------~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 281 (391)
+.....++......|.++.. ..+.+. ...+.+.+...+..++..++..++-+|.++|.. ....+.++
T Consensus 282 ~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~-----~~~~~~~G 356 (500)
T PRK09584 282 MLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLP-----MPHKFAIG 356 (500)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCC-----cHHHHHHH
Confidence 23344444555555555443 111221 225566666776777777777676666655421 22334456
Q ss_pred hHhhHHHHHHhhcCC---------chhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHH
Q 016338 282 FIGPGVSLLCLNYAK---------SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTI 351 (391)
Q Consensus 282 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~ 351 (391)
+++.+++...+.... +.++......+.........|.......+..| +.||+++|.......+|..++..
T Consensus 357 ~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~ 436 (500)
T PRK09584 357 MVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGY 436 (500)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666655543221 13344444555555566667777777777766 89999999777666666666655
Q ss_pred HhhHhhc---------cccchhHHHHHHHHHHHHHHHHHHH
Q 016338 352 GTGYFVQ---------WLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 352 ~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
+.+.... ..+.+...|...++..++..++.+.
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 437 VANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5542211 1122667777777665544443333
No 101
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.93 E-value=2.6e-23 Score=185.14 Aligned_cols=363 Identities=15% Similarity=0.126 Sum_probs=245.0
Q ss_pred chhhHH-HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHH--HHHH-hhhhhh--hccchH-HHH
Q 016338 4 AVVPLA-AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALW--SLST-LLTPWA--ATHSTA-SLL 76 (391)
Q Consensus 4 ~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~--~~~~-~~~~~a--~~~~~~-~~~ 76 (391)
..|... ++.|+|.+|+|.+.++..+...+.+|+.|.++||.|.||-++...... ..+. +...+. ...|++ ..+
T Consensus 29 F~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~i 108 (412)
T PF01306_consen 29 FFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAI 108 (412)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHH
T ss_pred HHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444 458999999999999999999999999999999999777655443322 1122 221111 112322 223
Q ss_pred HHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
++-+..|+......|..-+++.++. ++.+.-.|-.....++|.+++..++|.+.+. +-+..|++....+++..++..
T Consensus 109 ig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~ 185 (412)
T PF01306_consen 109 IGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLL 185 (412)
T ss_dssp HTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHH
Confidence 3333344444445566666665554 5567778888999999999999999998863 446678877766666666656
Q ss_pred hccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhh---CC
Q 016338 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVF---NV 233 (391)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~ 233 (391)
...|+.+++.+..+.++ +++++.+.++..+++|+|++|.+.+........+..+....|.|.++.+ +.
T Consensus 186 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~ 256 (412)
T PF01306_consen 186 LLKPDVPPQAEVADALG---------AKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQ 256 (412)
T ss_dssp SS---SSSSS-SSTTSS---------S------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHH
T ss_pred HcCCcCchhhhhhcccc---------cCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 66555444322111110 0011112235678999999999999888888888888888888887633 23
Q ss_pred CcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhh
Q 016338 234 NLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSS 313 (391)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (391)
+.+..|++.+.-.+..++...+.+++.+|+|. |..+.++..++.+-....+..++++.....-.+-..-..
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~---------k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~ 327 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGA---------KNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFP 327 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---------HHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcCh---------HhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHH
Confidence 44567888888888899999999999999994 466667777888888888888998887777666666666
Q ss_pred hcccchhhhhhhccc-cchhHHHHHH-HHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 314 FSQAGYLLNIQEIAP-DCAGFLHGIA-NSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 314 ~~~~~~~~~~~~~~~-~~~~~~~g~~-~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
.......-+.++..| +..++...+. +...+++..+.+.+.|.++|+.| ++..+++.+.+.+...++..+.-+++
T Consensus 328 l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 328 LLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 667777778888777 6778888885 67788999999999999999999 88777777776666555554444433
No 102
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.93 E-value=2.2e-23 Score=183.99 Aligned_cols=278 Identities=11% Similarity=0.056 Sum_probs=205.2
Q ss_pred ccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh--------------
Q 016338 69 THSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-------------- 134 (391)
Q Consensus 69 ~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~-------------- 134 (391)
.++|+.++++-++.|.|.+...+..+.++++..|+|++.+.+++.+...++|..++|.+++.+...
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANA 86 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhH
Confidence 488999999999999999999999999999999999999999999999999999999999987731
Q ss_pred --cCchhHHHHHHHHHHHHHHHHhhc-cccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHH
Q 016338 135 --IGISGPFILFSSLGLLWLSTWTSK-VTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANIT 211 (391)
Q Consensus 135 --~gwr~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (391)
.+|+++|++.+.+..+..+...+. .||.++++ ++++ + ++ +..+.++.+|+|.++...+..++
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~---~~~~----~------~~--~~~~~~~~~~~~~~~l~~~~~f~ 151 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEAD---VARV----S------SG--DTTQKTSAFQFTHLVLGALGIFV 151 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccc---cccc----c------cc--cccchhhHHhhHHHHHHHHHHHH
Confidence 479999997777655554443332 23321111 0000 0 00 00122356788899988888888
Q ss_pred HHHHHHHHHHhhHHHHHhh--hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHH
Q 016338 212 NNWGYFVLLSWMPIYFNTV--FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSL 289 (391)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (391)
+...+.+...|.+.|+++. +|+++++++...+....+.++|+++.+++.||+++| | .+..+..+..+..
T Consensus 152 yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~-------~--~l~~~~~l~~~~~ 222 (310)
T TIGR01272 152 YVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQG-------R--YLAFNAFLAVLLS 222 (310)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-------H--HHHHHHHHHHHHH
Confidence 8889999999999999864 689999999999999999999999999999999964 2 2334444444444
Q ss_pred HHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHH
Q 016338 290 LCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTV 369 (391)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~ 369 (391)
.+....++..... ...+.+.+.+...|...+...+..|++.+++.++. ....+|+.+.|.+.|.+.|..| .+..+++
T Consensus 223 ~l~~~~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~~~a~~v 299 (310)
T TIGR01272 223 IGAALTHGYVAMW-FVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-IQLAFAL 299 (310)
T ss_pred HHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-chHHHHH
Confidence 3333333333222 33344455566667767777676776677777775 5778999999999999999988 7777764
Q ss_pred HHHH
Q 016338 370 TAGL 373 (391)
Q Consensus 370 ~~~~ 373 (391)
...+
T Consensus 300 ~~~~ 303 (310)
T TIGR01272 300 PVPC 303 (310)
T ss_pred HHHH
Confidence 4443
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.93 E-value=1.1e-22 Score=189.71 Aligned_cols=331 Identities=13% Similarity=0.076 Sum_probs=222.6
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhh----cCch-HHHHHHHHHHHHHHhhhhhhh----ccchHHH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGGK-KVLAWGVALWSLSTLLTPWAA----THSTASL 75 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~~~~~~~~~~~~a~----~~~~~~~ 75 (391)
.+.+.+++|+|..++|.+.++..+..++..|+.|.++|| +||| +.++.+....+++..+.-... ......+
T Consensus 33 ~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~ 112 (444)
T PRK09669 33 AYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYA 112 (444)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 455778899999999999999999999999999999998 7775 556667777766665542221 1124556
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhc-CccchhhHHHHHHhhhhhhHHHHhhHHHHHHh-------hcCchhHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILFSSL 147 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~-------~~gwr~~f~~~~~~ 147 (391)
++..++.+.+......+..++.+|+. ++++|++..+.......+|..+++.+...+.. ..+|+..+.+.+++
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii 192 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLL 192 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 66677777777777777889999988 55889999898888888888888765544433 34688888888888
Q ss_pred HHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHH
Q 016338 148 GLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYF 227 (391)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (391)
..+..+..++..+|+++++++ ++++..+++++++|||.++......++............+.|.
T Consensus 193 ~~v~~~~~~~~~~e~~~~~~~----------------~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~ 256 (444)
T PRK09669 193 GVVLFFCCFFMTKERYTPEVD----------------NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYV 256 (444)
T ss_pred HHHHHHHHhCCeEEecCCCCc----------------CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheee
Confidence 877766666666654322110 0111223678889999998887777766666655555444444
Q ss_pred HhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHH-HHHHhhc-CCchhHHHHHH
Q 016338 228 NTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV-SLLCLNY-AKSPAVAAVLI 305 (391)
Q Consensus 228 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~ 305 (391)
+...+ +++..+.+.....+..+++.++.+++.||+++| + ....+.....+ ....... .++.+...+..
T Consensus 257 ~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (444)
T PRK09669 257 NYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-------R--AFKWTIVAFVILSALIFFIPPSNVWLIFALN 326 (444)
T ss_pred eeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------H--HHHHHHHHHHHHHHHHHHhCcchHHHHHHHH
Confidence 44333 333444455555677788889999999999865 2 22223332222 2212222 23344344444
Q ss_pred HHHHHhhhhcccchhhhhhhccc--------cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 306 TIALSLSSFSQAGYLLNIQEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
++.+...+...+...+...|..+ +..|..+|..+....+|..+++.+.|.+.|..|
T Consensus 327 ~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 327 ILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44444445555666777766543 234678899999999999999999999998776
No 104
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.93 E-value=4.7e-30 Score=240.35 Aligned_cols=354 Identities=18% Similarity=0.170 Sum_probs=240.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhcc---chHHHHHHHHHHHhhhhchhhhH
Q 016338 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH---STASLLAVRAFFGLAEGVAMPAM 93 (391)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~---~~~~~~~~r~l~G~g~~~~~~~~ 93 (391)
.+.++..+...++..+|+++.|.++||+|||+.+..+.++..++.++.++ ++ |++.+.++|++.|++.|...+..
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAF--APSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence 45789999999999999999999999999999999999999999999944 48 99999999999999999999999
Q ss_pred HHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc---CchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCC
Q 016338 94 STLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI---GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVS 170 (391)
Q Consensus 94 ~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (391)
..++.|..|+|+|++...+.+....+|..++..++..+.+.. +||..+.+.++++++..+. ..+.||+|+....++
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~-~~~~pESP~wL~~~~ 202 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLL-RFFLPESPRWLLSKG 202 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccceecccc
Confidence 999999999999999999999999999999988876654433 4999999988888765554 467899987532221
Q ss_pred hhHH--HHHHc--------CCCcc------cccCCCccHHHhhcCCc----hHHHHHHHHHH-HHHHHHHHHhhHHHHHh
Q 016338 171 KSEL--RLIQA--------GKSDS------VKKRNPPSLRHLLSKLP----SWTVIIANITN-NWGYFVLLSWMPIYFNT 229 (391)
Q Consensus 171 ~~~~--~~~~~--------~~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 229 (391)
+.++ +..++ ++.++ +.++.+..++++++++. ........... .........+.|..+++
T Consensus 203 ~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~ 282 (451)
T PF00083_consen 203 RDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN 282 (451)
T ss_pred cccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc
Confidence 1110 00000 00000 11111134566666643 22222222222 22333444555655555
Q ss_pred hhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhh-----cCCc----hhH
Q 016338 230 VFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN-----YAKS----PAV 300 (391)
Q Consensus 230 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~ 300 (391)
.+.+.. -.......+...++.+....+.||+||| .....+...+.++...+. ..++ ...
T Consensus 283 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr---------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (451)
T PF00083_consen 283 -AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRR---------KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSIL 350 (451)
T ss_pred -cccccc--cccccccccccccccccccccccccccc---------cccccccccccccccccccccccccccccccccc
Confidence 566665 2223344455667777888999999954 444455555555544442 1122 122
Q ss_pred HHHHHHHH-HHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHH
Q 016338 301 AAVLITIA-LSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTT 378 (391)
Q Consensus 301 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 378 (391)
......+. ..+.....+....+..|.+| +.|+++.|+....++++++++|.+...+.+..+ ....+.+.+++.++..
T Consensus 351 ~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~-~~~~~~i~~~~~~i~~ 429 (451)
T PF00083_consen 351 SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG-GWGVFLIFAGVCLIAI 429 (451)
T ss_pred cceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccchhhHHHHHHHH
Confidence 22222222 22232344556678899999 899999999999999999999999999998876 4455555555555555
Q ss_pred HHHHHhcc
Q 016338 379 IFWNLYST 386 (391)
Q Consensus 379 ~~~~~~~~ 386 (391)
+...++.+
T Consensus 430 i~~~~~lp 437 (451)
T PF00083_consen 430 IFVYFFLP 437 (451)
T ss_pred hheeEEEe
Confidence 55444433
No 105
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4.6e-25 Score=180.64 Aligned_cols=362 Identities=17% Similarity=0.233 Sum_probs=248.4
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhh-cCchHHHHHHHHHHHHHHhhhhhh-hccchHHHHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWSLSTLLTPWA-ATHSTASLLAVRAF 81 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~~r~l 81 (391)
+..++.+|.+++.++..++.++|++...+..++.|++.|| +|-|..-.+-+....+|.++.+.. .++.+|++..+|++
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~ 145 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFL 145 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhhee
Confidence 3456677888888999999999999999999999999996 588877777777777777776322 35899999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchh---------HHHHHHHHHHHHH
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISG---------PFILFSSLGLLWL 152 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~---------~f~~~~~~~~~~~ 152 (391)
.|+|.....++.++++..|+..||.+.++|+..+...+|..+--.+.+++.+..+--. .....+...+...
T Consensus 146 FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~s 225 (459)
T KOG4686|consen 146 FGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQS 225 (459)
T ss_pred eccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 9999998889999999999999999999999999999999998888888877543110 1122222222222
Q ss_pred HHHhhccccCCCCCCCCChhHHHH-HHcCCCcccccCCCccHHHhh-cCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 016338 153 STWTSKVTNDPCNSPFVSKSELRL-IQAGKSDSVKKRNPPSLRHLL-SKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV 230 (391)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (391)
+.+....--..+ +.|... .++....+ + ..+.+.. -.|.+|.+....++++...+.+...-|.++++.
T Consensus 226 lical~lg~~D~------rAerilh~e~g~~Ge-~----pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~r 294 (459)
T KOG4686|consen 226 LICALSLGLSDD------RAERILHLEEGFLGE-E----PKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKR 294 (459)
T ss_pred HHHHHHhhhhhh------HHHHHHhhhcCcccC-C----cccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHh
Confidence 222111100000 001000 01110000 0 0111111 147899999999999999999999999999999
Q ss_pred hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhH-hhHHHHHHhhcC-CchhHHHHHHHHH
Q 016338 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI-GPGVSLLCLNYA-KSPAVAAVLITIA 308 (391)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~ 308 (391)
+|+|+..++.+.+.......+..++.|.++||+|++ .....+.. ....+-..+.++ -+++.......+.
T Consensus 295 fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n---------~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 295 FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN---------LWWVASACILTLLGHSGLFFTFLSPYTSMTFLGLS 365 (459)
T ss_pred hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce---------ehhHHHHHHHHHHHhhhHHhhhccHHHHHHHHhhh
Confidence 999999999999999999999999999999999965 22222222 222221222221 1233222222221
Q ss_pred HHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhH---HHHHHHHHHHHHHHHHHHh
Q 016338 309 LSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQA---FLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~ 384 (391)
........+..+..+.| ++.|+++|.++.+.++|-.+.|.+.|.+.|..|+|.. .|...+.+.+.+..+.+.+
T Consensus 366 ---ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 366 ---YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred ---HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 12222224445555666 6889999999999999999999999999998876543 4555666666666666665
Q ss_pred ccCc
Q 016338 385 STGE 388 (391)
Q Consensus 385 ~~~~ 388 (391)
.|++
T Consensus 443 N~kq 446 (459)
T KOG4686|consen 443 NKKQ 446 (459)
T ss_pred eccc
Confidence 5544
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.91 E-value=9.2e-23 Score=190.32 Aligned_cols=343 Identities=14% Similarity=0.032 Sum_probs=226.6
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcC-----chHHHHHHHHHHH-HHHhhhhhhhccchHHH-
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG-----GKKVLAWGVALWS-LSTLLTPWAATHSTASL- 75 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~~~-~~~~~~~~a~~~~~~~~- 75 (391)
...|.+.+++|+|+++++...+...+...+-.+ +|+++||++ ||+.++++.++.. +..... +..++....
T Consensus 47 ~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l--~~~~~~~~~~ 123 (468)
T TIGR00788 47 PLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLL--PGKVSSAKVA 123 (468)
T ss_pred hhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhc--ccccchHHHH
Confidence 355667888999999999999999999998555 999999998 7778888877663 333333 333554444
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHH---HHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAI---GICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWL 152 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~---~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~ 152 (391)
.+..++.+++.+...+...++..|..+ |++.... +......++|..+++.+++.+.+.++||..|++.+.+.++..
T Consensus 124 ~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~ 202 (468)
T TIGR00788 124 AAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQL 202 (468)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHH
Confidence 458899999999999999999999998 5554433 333344558999999999999999999999999988887764
Q ss_pred HHHhhccccCCC-CCCCCChhHH---HHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHH-HHHHHHHHHHhhHHHH
Q 016338 153 STWTSKVTNDPC-NSPFVSKSEL---RLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANIT-NNWGYFVLLSWMPIYF 227 (391)
Q Consensus 153 ~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 227 (391)
+. ..+.+|++. ..++.++++. .....+. .+..++...+.++.+++|.++...+..++ ..........+. .+.
T Consensus 203 ~~-~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~ 279 (468)
T TIGR00788 203 FV-SNLSKERRAFVRPRIGTYLEMNMALLTLGV-LANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CAT 279 (468)
T ss_pred HH-HHhcccccccccccccccchhhhhhhhhhH-HHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEE
Confidence 43 444566431 1111101000 0000000 00001112245666788888876665555 222211111111 133
Q ss_pred HhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc----------CCc
Q 016338 228 NTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY----------AKS 297 (391)
Q Consensus 228 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 297 (391)
++..|+++.+.|......+++.+++....+++.+|++. +..+..+.+...+....... .++
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~---------r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~ 350 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPY---------RLLFGVTTLLYTLSSLFDLILVKRWNLAFGISD 350 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCH---------HHHHHHHHHHHHHHHhCceeeeeccccccCCCC
Confidence 34589999999999999999999999999999888874 34555555555554432210 022
Q ss_pred hhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 298 PAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
.+.......+.....+........++.+..| +++|+.+++.+++.++|..+++.++|.+.++.|
T Consensus 351 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 351 EVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred eeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2222233333334444445555666666666 899999999999999999999999999998876
No 107
>PRK09848 glucuronide transporter; Provisional
Probab=99.91 E-value=6.4e-21 Score=178.19 Aligned_cols=331 Identities=14% Similarity=0.050 Sum_probs=210.8
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc----CchHHH-HHHHHHHHHHHhhhhhh---hcc--chHH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY----GGKKVL-AWGVALWSLSTLLTPWA---ATH--STAS 74 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~~-~~~~~~~~~~~~~~~~a---~~~--~~~~ 74 (391)
.+.+++++|++..++|.+.+...+..++..++.|+++||. ||||.. .++.+...+...+.-.. .++ ....
T Consensus 32 ~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (448)
T PRK09848 32 LSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVY 111 (448)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHH
Confidence 3456777899999999999999999999999999999996 777644 55555444444332111 111 2233
Q ss_pred HHHHHHHHHhhhhchhhhHHHHhhhhcC-ccchhhHHHHHHhhhh-----hhHHHHhhHHHHHHhhc--CchhHHHHHHH
Q 016338 75 LLAVRAFFGLAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFH-----LGNVVGLLLTPIMLSTI--GISGPFILFSS 146 (391)
Q Consensus 75 ~~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~-----lg~~~g~~~~~~l~~~~--gwr~~f~~~~~ 146 (391)
.++.-.+.+++.+...+...++..|..+ +++|.+..+....+.+ ++..++|.+.+...+.. +|.....+.++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v 191 (448)
T PRK09848 112 AYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAI 191 (448)
T ss_pred HHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHH
Confidence 4555667788888888777787777664 4678887766654433 44555555554321111 12111123333
Q ss_pred HHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHH
Q 016338 147 LGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIY 226 (391)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (391)
+..+..+......||+++++.++ +...+.+++++|||.++...+..++............|.|
T Consensus 192 ~~~~~~~~~~~~~~e~~~~~~~~-----------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~ 254 (448)
T PRK09848 192 AGMVLYFICFKSTRENVVRIVAQ-----------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFY 254 (448)
T ss_pred HHHHHHHHHHcCcEeccCCCccC-----------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheee
Confidence 44444444444445543221110 0112246789999999999888888888888888888888
Q ss_pred HHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC--chhHHHHH
Q 016338 227 FNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVL 304 (391)
Q Consensus 227 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 304 (391)
+++.+|.++...++......++..++.++.+++.||+++| ..+..+..+..++...+...+ +.+.....
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~---------~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK---------NTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---------HHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 8888888776665555554567788899999999999854 334445555444444433322 23333332
Q ss_pred HHHHHHhhhhcccchhhhhhhccc--------cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 305 ITIALSLSSFSQAGYLLNIQEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
..+.....+...+...+...|..| +++|..+|+.+....+|..+++.+.+.+.+..|
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333333334444555556555544 245999999999999999999999999887655
No 108
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.90 E-value=1.3e-20 Score=173.79 Aligned_cols=367 Identities=12% Similarity=0.073 Sum_probs=223.9
Q ss_pred hhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc-CchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 5 VVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 5 ~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
+|. +.+++|.++.+.+.+.+.+.....++.+++|+++||+ ||||++.++.++..++.++.+.. ..+...+.+...+.
T Consensus 32 L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~-~~~~~~~~l~l~li 110 (493)
T PRK15462 32 LILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS-EIHPSFLYLSLAII 110 (493)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh-hcchhHHHHHHHHH
Confidence 344 4667899999999999999999999999999999999 99999999999999998776332 11223344444455
Q ss_pred HhhhhchhhhHHHHhhhhcCcc--chhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
++|.|...+...++++|.+|++ +|..++++.....++|..++|.+.+++.+..|||+.|.+.++..++..+..+...+
T Consensus 111 ~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~ 190 (493)
T PRK15462 111 VCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNR 190 (493)
T ss_pred HHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhh
Confidence 5666777677789999999875 69999999999999999999999999999999999999876544443333322221
Q ss_pred cCCCC---CCCCChhHHHH----------------HHcCC-Cccc-------------------ccCCCccHHHhhcCC-
Q 016338 161 NDPCN---SPFVSKSELRL----------------IQAGK-SDSV-------------------KKRNPPSLRHLLSKL- 200 (391)
Q Consensus 161 ~~~~~---~~~~~~~~~~~----------------~~~~~-~~~~-------------------~~~~~~~~~~~~~~~- 200 (391)
..++. +++..++++.. ..... .++. .+++ .+ +.-|+|
T Consensus 191 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~er~r~ 267 (493)
T PRK15462 191 HFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKA-EN--QKQRKEL 267 (493)
T ss_pred hhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC--HHHHhhH
Confidence 11110 01110000000 00000 0000 0000 00 111222
Q ss_pred -chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCC----cchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 016338 201 -PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN----LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRK 275 (391)
Q Consensus 201 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~ 275 (391)
.+..+.+.....+..+....+-+..|.++..+.+ +.......+...+..++..++.+++-.|..+|+.......|
T Consensus 268 ~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~K 347 (493)
T PRK15462 268 GLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGK 347 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHH
Confidence 1223333444444455555556666666542221 12355666777777888888888887777543222222233
Q ss_pred HHHHHHhHhhHHHHHHhhc-----C----CchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHH-HH
Q 016338 276 IMQSIGFIGPGVSLLCLNY-----A----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAG-TL 344 (391)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~-~~ 344 (391)
.. ++++.++++...+.. . .+.++.+....+......+..|.-.+...+..| +.+|..+|...... .+
T Consensus 348 fa--~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~ 425 (493)
T PRK15462 348 FA--LGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAI 425 (493)
T ss_pred HH--HHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 33 444444444433311 1 234445555555566667778888888888888 79999999986533 46
Q ss_pred HHHHHHHHhhHhhcc-----------ccchhHHHHHHHHHHHHH
Q 016338 345 AAIISTIGTGYFVQW-----------LGSFQAFLTVTAGLYFVT 377 (391)
Q Consensus 345 g~~i~~~~~g~l~~~-----------~g~~~~~~~~~~~~~~~~ 377 (391)
|..++..+.+...+. ...|...|...+...++.
T Consensus 426 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 426 ANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 666666655554311 112555666666555444
No 109
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.90 E-value=9.6e-22 Score=182.57 Aligned_cols=333 Identities=17% Similarity=0.182 Sum_probs=253.2
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhh----hcCchH-HHHHHHHHHHHHHhhhhhhhcc-------c
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD----KYGGKK-VLAWGVALWSLSTLLTPWAATH-------S 71 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~-~~~~~~~~~~~~~~~~~~a~~~-------~ 71 (391)
..+.+.+.+|+++..+|.+..+..+..++..|+.|.++| |+|||| .++++....+++..+.... .+ .
T Consensus 24 ~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~-~p~~~~~~~~ 102 (428)
T PF13347_consen 24 LLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSP-PPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcc-ccchhhhhhH
Confidence 345667778999999999999999999999999999999 899766 5567778888877776322 02 2
Q ss_pred hHHHHHHHHHHHhhhhchhhhHHHHhhhhcC-ccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-------CchhHHHH
Q 016338 72 TASLLAVRAFFGLAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFIL 143 (391)
Q Consensus 72 ~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-------gwr~~f~~ 143 (391)
...+.+.-++..++.........++..|..+ +|+|.+..+..+....+|..+...+.+.+.+.. +|++...+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3345677777789888888999999999997 568999999999999999876666666655422 59999999
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhh
Q 016338 144 FSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWM 223 (391)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (391)
.+++.++..+...+..+|++++.++ ++++.+..+.+++++|||.++......++............
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~--------------~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~ 248 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTE--------------QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFL 248 (428)
T ss_pred HHHHHHHHhhhhhheeeeccccccc--------------cccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHH
Confidence 9999988888888887772211111 01122234467899999999999999999988888888888
Q ss_pred HHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC--CchhHH
Q 016338 224 PIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA--KSPAVA 301 (391)
Q Consensus 224 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 301 (391)
+.|.++..|.+ ...+.+.....+...++.++.++++||+|+| .....+..+..++....... ++.+..
T Consensus 249 ~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (428)
T PF13347_consen 249 PYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKK---------KVYIIGLLLAALGFLLLFFLGPGSPWLV 318 (428)
T ss_pred HHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccce---------eehhhhHHHHHHHHHHHHHHHhhhHHHH
Confidence 88888877777 5667777788889999999999999999965 34445555555555444443 356666
Q ss_pred HHHHHHHHHhhhhcccchhhhhhhccc--------cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 302 AVLITIALSLSSFSQAGYLLNIQEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
.+...+.+...+.......+...|..+ +..|..+|..+....++..+++.+.+.+.+..|
T Consensus 319 ~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 319 LILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 666666666666666667777666554 345899999999999999999999999987655
No 110
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.90 E-value=8.1e-21 Score=178.37 Aligned_cols=336 Identities=11% Similarity=0.026 Sum_probs=223.3
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhh----hcCc-hHHHHHHHHHHHHHHhhhhhhh--cc--chHHH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD----KYGG-KKVLAWGVALWSLSTLLTPWAA--TH--STASL 75 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~~~~~~~~~~~~~~~~~~a~--~~--~~~~~ 75 (391)
...+.+.+|+|+.++|.+..+.-+.-++..|+.|.++| |+|| |+.++++....+++..+.-... ++ .+..+
T Consensus 30 ~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~ 109 (473)
T PRK10429 30 MYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFV 109 (473)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHH
Confidence 34456677999999999999999999999999999999 6699 5677778777777765552111 11 13345
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhc-CccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh-------cCchhHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWF-PSHERASAIGICMGGFHLGNVVGLLLTPIMLST-------IGISGPFILFSSL 147 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~-------~gwr~~f~~~~~~ 147 (391)
++..++.+++.....+...++..|.. ++++|.+..+....+.++|..+.+.+...+.+. .+|+....+.+++
T Consensus 110 ~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~ 189 (473)
T PRK10429 110 CVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAF 189 (473)
T ss_pred HHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 56667778888888888899999998 588999999987787888766665554433222 2567777777777
Q ss_pred HHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHH
Q 016338 148 GLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYF 227 (391)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (391)
.++..+..++..+|+++++...+++ +++.+..+.++.+++||.++......++..........+.+.|.
T Consensus 190 ~~~~~~~~~~~~~e~~~~~~~~~~~-----------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~ 258 (473)
T PRK10429 190 FIVSTIITLRNVHEVYSSDNQVSAE-----------GSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYF 258 (473)
T ss_pred HHHHHHHHHcCceecCCcccccccc-----------ccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEE
Confidence 6666666666666654221110000 01111223456677899888888888888777777777777666
Q ss_pred HhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHh-----hcCCchhHHH
Q 016338 228 NTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL-----NYAKSPAVAA 302 (391)
Q Consensus 228 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 302 (391)
+... .++...+.+.....+..+++.++.+++.||+|+| + ....+..+..++.... ...++.+...
T Consensus 259 ~y~~-~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (473)
T PRK10429 259 TYVI-GDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-------I--LWAGASIFPVLSCGVLLLMGLAAPHNALLIV 328 (473)
T ss_pred EEEC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-------H--HHHHHHHHHHHHHHHHHHHhccCchhHHHHH
Confidence 6543 3555666677776788899999999999999965 2 2223333222222111 1122333333
Q ss_pred HHHHHHHHhhhhcccchhhhhhhccc--------cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 303 VLITIALSLSSFSQAGYLLNIQEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
+...+.....+.......++..|..+ +..|...|..+....++..+++.+.|.+.+..|
T Consensus 329 i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 329 IAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33333333444444555666666533 334668999999999999999999999988765
No 111
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.89 E-value=2.7e-20 Score=162.39 Aligned_cols=354 Identities=14% Similarity=0.054 Sum_probs=263.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchH-HHHHHHHHHHHHHhhhhhhhc-cchHHHHHHHHHHHhhhhchhhhHH
Q 016338 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKK-VLAWGVALWSLSTLLTPWAAT-HSTASLLAVRAFFGLAEGVAMPAMS 94 (391)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~~~~~~~~~a~~-~~~~~~~~~r~l~G~g~~~~~~~~~ 94 (391)
+..+...++..+..++.+|+.|.++|+.|+|| .+-....+..+..+...++.. ++++..++.-.+..++.....+...
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 45788999999999999999999999999766 555555555666666644433 2345556677888999999999999
Q ss_pred HHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHH--HH-H---------------hhcCchhHHHHHHHHHHHHHHHHh
Q 016338 95 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTP--IM-L---------------STIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 95 ~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~--~l-~---------------~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
+++.+..++++-++..+.-.....+|..+.-.+.- .. . +...-|..+.+.++.-++..+..+
T Consensus 138 s~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~ 217 (438)
T COG2270 138 SMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMI 217 (438)
T ss_pred hHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHH
Confidence 99999999888888877777777777666554431 11 1 223468889999999999999988
Q ss_pred hccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc
Q 016338 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK 236 (391)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 236 (391)
+..||.++.....++.-... -++.+.+++++.+++.+....+..+++.-+..+.......|....+|++..
T Consensus 218 ~~v~~~~~~~~~~~~~l~~g---------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~ 288 (438)
T COG2270 218 LNVHDAEKISSPPPTALRNG---------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSST 288 (438)
T ss_pred hcccccccccccchHHHHHH---------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHH
Confidence 88888775431111111110 111234678888999999999999999999999999999999988999999
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcc
Q 016338 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQ 316 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (391)
+..++.....+.+++|+++.|++.||++.| .++..+.+...+..+...........+++.++.+.+.+...
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k---------~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSK---------PVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCc---------eeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 999999999999999999999999999965 34444444444433333333444444454444444444444
Q ss_pred cchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 317 AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 317 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
...-++..+..| ++.++.+|+++..++..+..+|.+.+.+.+.+|+.+..+....++..++.+..+..+.++
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~~ 432 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVPG 432 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCCC
Confidence 445555555555 899999999999999999999999999999999888888888888888888877766443
No 112
>PRK11462 putative transporter; Provisional
Probab=99.86 E-value=5.6e-18 Score=158.12 Aligned_cols=329 Identities=14% Similarity=0.064 Sum_probs=213.6
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhh----cCchH-HHHHHHHHHHHHHhhhhhhhccc------hH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGGKK-VLAWGVALWSLSTLLTPWAATHS------TA 73 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~~~~~~~~~~~~~~~~~~a~~~~------~~ 73 (391)
...+.+..|+++..+|.+..+.-+--++..|+.|.++|| +|||| .++++....+++.+++-.. ++ ..
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~--p~~s~~~~~~ 110 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYST--PDLSMNGKMI 110 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhC--CCCCcchHHH
Confidence 344567789999999999999999999999999999995 68865 5556667777776665222 32 34
Q ss_pred HHHHHHHHHHhhhhchhhhHHHHhhhhcC-ccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-------CchhHHHHHH
Q 016338 74 SLLAVRAFFGLAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFILFS 145 (391)
Q Consensus 74 ~~~~~r~l~G~g~~~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-------gwr~~f~~~~ 145 (391)
.+.+.-++..++.......-.++..|..+ +|||.+..++...+..+|..+++.+...+.+.. +|+....+.+
T Consensus 111 y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ 190 (460)
T PRK11462 111 YAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLS 190 (460)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 45666677788888888888999999886 688999999999999999888887765554433 5777777777
Q ss_pred HHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHH
Q 016338 146 SLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPI 225 (391)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (391)
++.++....++...+|+++++++ + .+.++.++..++||.++......++..............
T Consensus 191 ii~~i~~~i~~~~~kE~~~~~~~--~---------------~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y 253 (460)
T PRK11462 191 VVAFMMLAFCFFTTKERVEAPPT--T---------------TSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMY 253 (460)
T ss_pred HHHHHHHHHHHhcceeccCCCcc--C---------------CCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhh
Confidence 77777666666655554332111 0 001225677888988887766666665555555455554
Q ss_pred HHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC-chhHHHHH
Q 016338 226 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-SPAVAAVL 304 (391)
Q Consensus 226 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 304 (391)
|.+...|. +...+.+.....++.+++.++.+++.||+++| +... .................. +.......
T Consensus 254 ~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (460)
T PRK11462 254 YVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-------TIFW-WTNALLAVISLAMFFVPMQASITMFVF 324 (460)
T ss_pred hhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-------HHHH-HHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence 55544443 33445566677788889999999999999865 2222 111111111121111112 22222222
Q ss_pred HHHHHHhhhhcccchhhhhhhccc--------cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 305 ITIALSLSSFSQAGYLLNIQEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
.++.+...+...+....+..|..+ +..|...+.......+|..+++.+.|.+.+..|
T Consensus 325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222222233333434445554433 223555677778899999999999999887654
No 113
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.85 E-value=9.1e-18 Score=147.13 Aligned_cols=360 Identities=13% Similarity=0.111 Sum_probs=251.2
Q ss_pred hHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcC-----chHH-HHHHHHHHHHHHhhhhhhh---cc-------
Q 016338 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG-----GKKV-LAWGVALWSLSTLLTPWAA---TH------- 70 (391)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~-~~~~~~~~~~~~~~~~~a~---~~------- 70 (391)
-+..|++++..-.+.+.+...+.. ...+.+|+.+|+.+ ||.. +..|.++...+..+.+++. +.
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 367799999999999999999875 46999999999999 7754 4555666666665554331 22
Q ss_pred ch--H--HHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchh---HHHH
Q 016338 71 ST--A--SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISG---PFIL 143 (391)
Q Consensus 71 ~~--~--~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~---~f~~ 143 (391)
+. + .....-.+.|+|.+.......+++.|..|+|+|+++.++...+.-+|.+++..+.+.+.+.+.-.- .+..
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 22 2 234456777999999889999999999999999999999999999999999999999888765322 2222
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhh
Q 016338 144 FSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWM 223 (391)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (391)
.+++.....++..+ ..|++.+++... +++++......++++..+|+........+.....++.=...+
T Consensus 164 ~a~i~~~l~~ia~w-g~E~r~~~~~~~-----------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iL 231 (403)
T PF03209_consen 164 VALIALLLNLIALW-GQEPRRSRRAAA-----------AERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVIL 231 (403)
T ss_pred HHHHHHHHHHHHHH-hcccCCcccccC-----------CCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHc
Confidence 23333333333222 223222221100 011112223467888889999988888888888888888889
Q ss_pred HHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHHHHHhHhhHHHHHH---hhcCCchh
Q 016338 224 PIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS-LIKAGYSLTLVRKIMQSIGFIGPGVSLLC---LNYAKSPA 299 (391)
Q Consensus 224 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 299 (391)
-+|--+.+|++..+...+......+..++....|++..| .+++ | ....+......++.. .....+.+
T Consensus 232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-------~--~a~~G~~~~~~~f~lii~a~~~~~~~ 302 (403)
T PF03209_consen 232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-------R--TAALGCLLGALAFALIILAGPLGSPW 302 (403)
T ss_pred CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-------H--HHHHHHHHHHHHHHHHHHHHhcccch
Confidence 999999999999999999999999999999999988774 3322 2 222333333333322 33445556
Q ss_pred HHHHHHHHHHHhhhhcccchhhhhhhcc-ccchhHHHHHHHHHHHHHHHHHHHHhhHhhccc----c-----chhHHHHH
Q 016338 300 VAAVLITIALSLSSFSQAGYLLNIQEIA-PDCAGFLHGIANSAGTLAAIISTIGTGYFVQWL----G-----SFQAFLTV 369 (391)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~----g-----~~~~~~~~ 369 (391)
.+-...++.+...+.+.....+.+.+.. +++.|..+|.-...+.++..++..+.|.+.|.. + .|...|.+
T Consensus 303 ~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~l 382 (403)
T PF03209_consen 303 LFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFAL 382 (403)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHH
Confidence 5555555555555555555555555554 589999999999999999999999999988742 2 26777777
Q ss_pred HHHHHHHHHHHHHHhccCc
Q 016338 370 TAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~ 388 (391)
=++..+++.++.....+++
T Consensus 383 Ea~ll~~a~~ll~~l~~~~ 401 (403)
T PF03209_consen 383 EAVLLLAALVLLGRLDRRE 401 (403)
T ss_pred HHHHHHHHHHHHHHhhhhc
Confidence 7777777777666555544
No 114
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=8.1e-19 Score=153.95 Aligned_cols=363 Identities=17% Similarity=0.169 Sum_probs=256.4
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhc----cchH--HHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT----HSTA--SLL 76 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~----~~~~--~~~ 76 (391)
+......+.++ |.+..-|..-+|++.+....+++-|+.||+|-|...+++..+.++|..+--.+.. +.++ ...
T Consensus 66 ~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~ 144 (480)
T KOG2563|consen 66 PINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTH 144 (480)
T ss_pred hHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhH
Confidence 44455666677 7777889999999999999999999999999999999999999999998644322 3445 677
Q ss_pred HHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc------Cchh--HHHHHHHHH
Q 016338 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI------GISG--PFILFSSLG 148 (391)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~------gwr~--~f~~~~~~~ 148 (391)
.++.+.+..+-.....-..+..-|||+++|..+..+-..+..+|.+++.++...+..+- .|.. .|+..+.+.
T Consensus 145 ~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~ 224 (480)
T KOG2563|consen 145 TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLA 224 (480)
T ss_pred HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHH
Confidence 88999999888877777788889999999999999999999999999998888876543 3544 355555555
Q ss_pred HHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 016338 149 LLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFN 228 (391)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (391)
.+..++..+..+++|+..+.......+ +.+...+.++.++|+++....+.+......+++..+.+..-+.
T Consensus 225 ~l~l~l~~~~~~~~P~tPps~s~~~~~----------~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~ 294 (480)
T KOG2563|consen 225 ALLLALVLFVFTKKPPTPPSASQAALQ----------DASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALC 294 (480)
T ss_pred HHHHHHHHHhcCCCCCCCCchhHhhhh----------cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccc
Confidence 555555555555555443322111111 1124457889999999999999888888888888777765665
Q ss_pred hhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHH-HHHhhcC----CchhHHHH
Q 016338 229 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS-LLCLNYA----KSPAVAAV 303 (391)
Q Consensus 229 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~ 303 (391)
. -|++...+|+......++++++..+.|.+.||.++- + ..+........++ +.+.... +.......
T Consensus 295 ~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f-------k-~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t 365 (480)
T KOG2563|consen 295 P-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF-------K-LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTT 365 (480)
T ss_pred c-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH-------H-HHHHHHHHHHHHHHHHHHHhhccCCceEehhhh
Confidence 5 578888999999999999999999999999998753 2 2222233333333 2222222 22333333
Q ss_pred HHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc---chhHHHHHHHHHHHHHHHH
Q 016338 304 LITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG---SFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g---~~~~~~~~~~~~~~~~~~~ 380 (391)
+..++.+..+..+...-.-.+..+|..-++..|+.+..+++-+.+-..+.+...+..+ ++...-+.......+..++
T Consensus 366 ~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~l 445 (480)
T KOG2563|consen 366 CGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAIL 445 (480)
T ss_pred HHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHH
Confidence 4444444444444334444556788888899999999999999999999999888765 1222334444444444444
Q ss_pred HHHhc
Q 016338 381 WNLYS 385 (391)
Q Consensus 381 ~~~~~ 385 (391)
..+.+
T Consensus 446 va~~r 450 (480)
T KOG2563|consen 446 VAFFR 450 (480)
T ss_pred Hhhhh
Confidence 44443
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1.2e-17 Score=150.51 Aligned_cols=333 Identities=17% Similarity=0.163 Sum_probs=255.2
Q ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhh----cCch-HHHHHHHHHHHHHHhhhhhhh----ccchHHHHHH
Q 016338 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDK----YGGK-KVLAWGVALWSLSTLLTPWAA----THSTASLLAV 78 (391)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~~~~~~~~~~~~a~----~~~~~~~~~~ 78 (391)
..+.+|+|+..+|.+..+-=+--++.-|+.|.+.|| +||| +.++++....++.+.++-... ..+....++.
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vt 118 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVT 118 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHH
Confidence 456689999999999999999999999999999995 7775 577777788888887763331 1234566777
Q ss_pred HHHHHhhhhchhhhHHHHhhhhcC-ccchhhHHHHHHhhhhhhHHHHhhHHHHHHh-------hcCchhHHHHHHHHHHH
Q 016338 79 RAFFGLAEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGISGPFILFSSLGLL 150 (391)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~-------~~gwr~~f~~~~~~~~~ 150 (391)
-.+.+++......+-.++.+|..+ ++||.+..+..+...++|..+...+.+.+.. ..||+..-.+.+++..+
T Consensus 119 Y~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i 198 (467)
T COG2211 119 YMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVI 198 (467)
T ss_pred HHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Confidence 888899999998889999999874 5789999999999999997777766655543 34799999999999999
Q ss_pred HHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 016338 151 WLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTV 230 (391)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (391)
..+.+++..+|++.+..+.+++ .+++..+++..+++||.+...++..++.........+....|.+..
T Consensus 199 ~~l~~~~~v~ER~~~~~~~~~~------------~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~ 266 (467)
T COG2211 199 LLLFCFFNVKERVVETQPTKTG------------VKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYV 266 (467)
T ss_pred HHHHHHHHhhcccCccccCccc------------ccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEE
Confidence 9999998888876533221111 1112223456788999999999988888888888888888899988
Q ss_pred hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC--chhHHHHHHHHH
Q 016338 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIA 308 (391)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 308 (391)
+|.+.............+.+.+.++..++.+|+|+| .+...+.+...+......+.+ +....++..++.
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk---------~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~ 337 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK---------KLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIA 337 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH---------HHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHH
Confidence 888888888888888888888899999999999954 455555666655555555444 334444444566
Q ss_pred HHhhhhcccchhhhhhhccc--------cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 309 LSLSSFSQAGYLLNIQEIAP--------DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
....+..++...++..|..+ +..|...|....+.-+|.+++..+.|++.+..|
T Consensus 338 ~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 338 GVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66666777777777766543 335888999999999999999999999988765
No 116
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.84 E-value=2.2e-22 Score=188.50 Aligned_cols=356 Identities=17% Similarity=0.171 Sum_probs=3.0
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh--hcc---------
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA--ATH--------- 70 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a--~~~--------- 70 (391)
+..+++++++|++++++.|++.+.+-++..+..++..++.+|..|-|.+-.|.++.++|++++++= ..+
T Consensus 23 ~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 23 NSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 456789999999999999999999999999999999999999888899999999999999987321 000
Q ss_pred -------------------------------------chHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHH
Q 016338 71 -------------------------------------STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGIC 113 (391)
Q Consensus 71 -------------------------------------~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~ 113 (391)
-+..+++++++.|+|....++...+++.|..++|+-+..+|+.
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 1347788999999999999999999999999999999999999
Q ss_pred HhhhhhhHHHHhhHHHHHHhh---------------------cC-chhHHHHHHHHHHHHHHHHhhccccCCCCCCCCCh
Q 016338 114 MGGFHLGNVVGLLLTPIMLST---------------------IG-ISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSK 171 (391)
Q Consensus 114 ~~~~~lg~~~g~~~~~~l~~~---------------------~g-wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (391)
.+...+|.++|.++++.+.+. .| |..-|++.+.+.++..+....++++.|+.++..++
T Consensus 183 ~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~ 262 (539)
T PF03137_consen 183 YAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEE 262 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccch
Confidence 999999999999999876531 12 77788889999888888888887776665211111
Q ss_pred hH------HHHHHcC-CCc-------ccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcch
Q 016338 172 SE------LRLIQAG-KSD-------SVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ 237 (391)
Q Consensus 172 ~~------~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 237 (391)
++ ++..+++ .++ +..+...+..+++++||.+....+..........++.++.|.|++++++.++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~ 342 (539)
T PF03137_consen 263 KESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQ 342 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 11 0000000 011 111233456788999999999999999999999999999999999999999999
Q ss_pred hhHHhhhHHH-HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHH--HHHHhh------------cC------C
Q 016338 238 AAWFSAVPWG-TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGV--SLLCLN------------YA------K 296 (391)
Q Consensus 238 ~~~~~~~~~~-~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------~~------~ 296 (391)
++++.....+ +.++|.+++|++.+|++-+.... .+.......+.... ..+.+. .. .
T Consensus 343 A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~---~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~ 419 (539)
T PF03137_consen 343 ASLLTGIVSIPGAALGILLGGYIVKKFKLSARGA---AKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSP 419 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHhhhhcchhheehheEEEEEEEecCcHHHH---HHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCC
Confidence 9998876665 67788899999999997541110 11111111111111 011100 00 0
Q ss_pred --------------------------c----hhHHHHHHHHHHHh-hhhcccchhhhhhhccccchhHHHHHHHHHHHH-
Q 016338 297 --------------------------S----PAVAAVLITIALSL-SSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTL- 344 (391)
Q Consensus 297 --------------------------~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 344 (391)
+ .....+..++..+. .....|......+-+.+++|+.+.|+...+.++
T Consensus 420 ~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rll 499 (539)
T PF03137_consen 420 SCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLL 499 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhh
Confidence 0 00111122222222 223344455556667779999999999888765
Q ss_pred HHHHHHHHhhHhhccc
Q 016338 345 AAIISTIGTGYFVQWL 360 (391)
Q Consensus 345 g~~i~~~~~g~l~~~~ 360 (391)
|.+-+|.+.|.+.|..
T Consensus 500 g~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 500 GFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------
T ss_pred cCcchHHHHhHHHhhh
Confidence 8899999999999973
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.82 E-value=6.7e-19 Score=165.09 Aligned_cols=265 Identities=16% Similarity=0.192 Sum_probs=215.8
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhh--h---------c-
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWA--A---------T- 69 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a--~---------~- 69 (391)
+..+.++.+.|+++.++.|++.+.+-++..+...+..+...|.-|-|.+-+|+++.+++++++++= + .
T Consensus 117 ~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~ 196 (735)
T KOG3626|consen 117 NSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVI 196 (735)
T ss_pred hhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhh
Confidence 346778999999999999999999999999999999999999999999999999999999987331 0 0
Q ss_pred ------c--------------------------------chHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHH
Q 016338 70 ------H--------------------------------STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIG 111 (391)
Q Consensus 70 ------~--------------------------------~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~ 111 (391)
+ -+..++++.++.|+|....++...+++.|...+|+-...+|
T Consensus 197 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlg 276 (735)
T KOG3626|consen 197 KQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLG 276 (735)
T ss_pred hccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHH
Confidence 0 01256789999999999999999999999999999999999
Q ss_pred HHHhhhhhhHHHHhhHHHHHHhhc-------------------CchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChh
Q 016338 112 ICMGGFHLGNVVGLLLTPIMLSTI-------------------GISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKS 172 (391)
Q Consensus 112 ~~~~~~~lg~~~g~~~~~~l~~~~-------------------gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (391)
+..+...+|.++|-++++++...+ .|..-|++.+.+.++..+..+++.++.|+..++...+
T Consensus 277 i~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~ 356 (735)
T KOG3626|consen 277 ILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRAR 356 (735)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhh
Confidence 999999999999999999886521 2778899999999999999888877777655432222
Q ss_pred HHHHHHcCCC-cccc-------cCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhh
Q 016338 173 ELRLIQAGKS-DSVK-------KRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAV 244 (391)
Q Consensus 173 ~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 244 (391)
+.+..+++.+ .++. +...+..+++++||.+....+...+....+.++.+|+|-|+++++|.++..+..+...
T Consensus 357 ~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~ 436 (735)
T KOG3626|consen 357 DLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGS 436 (735)
T ss_pred hhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhh
Confidence 2211111111 0111 1223456788999999999999999999999999999999999999999999999876
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhh
Q 016338 245 PWG-TMAVSGYMAGKASDSLIKA 266 (391)
Q Consensus 245 ~~~-~~~~~~~~~g~l~dr~~~~ 266 (391)
..+ +..+|.+++|++.+|+.-+
T Consensus 437 i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 437 IGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred hhhhhhhhhhhccceeeeeeccc
Confidence 665 5667789999999998644
No 118
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.81 E-value=5.5e-17 Score=145.02 Aligned_cols=379 Identities=15% Similarity=0.124 Sum_probs=236.2
Q ss_pred hhhHHHHhC----CChhhHHHHHHHHHHHHHHHHHhhhhhhhhc-CchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHH
Q 016338 5 VVPLAAKFG----WSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVR 79 (391)
Q Consensus 5 ~~~i~~~~~----~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r 79 (391)
.-.+..+++ .|+++..-+.+.|..-.-+...++|+++||+ |+|+++..+.++..+|.++.+.....+...+.++-
T Consensus 45 ~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L 124 (498)
T COG3104 45 ILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGL 124 (498)
T ss_pred HHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHH
Confidence 344555666 9999998888888888888999999999997 99999999999999999998432113678889999
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCcc--chhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhh
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPSH--ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 157 (391)
.+.++|.|..-+...++++|.+|++ +|-..+++...+.++|..++|.+.+++.++.||...|...++-.....+..+.
T Consensus 125 ~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~ 204 (498)
T COG3104 125 ALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLL 204 (498)
T ss_pred HHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999865 37788999999999999999999999999999999999988777766555544
Q ss_pred ccccC---CCCCCCCChhHHHHH-----------Hc----CCCcc-------------------cccCCCccHHHhhcCC
Q 016338 158 KVTND---PCNSPFVSKSELRLI-----------QA----GKSDS-------------------VKKRNPPSLRHLLSKL 200 (391)
Q Consensus 158 ~~~~~---~~~~~~~~~~~~~~~-----------~~----~~~~~-------------------~~~~~~~~~~~~~~~~ 200 (391)
..+.. +..++..+.+..... .. ....+ +..+.++...|.-|-.
T Consensus 205 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~ 284 (498)
T COG3104 205 GRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLL 284 (498)
T ss_pred ccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH
Confidence 33221 111111111000000 00 00000 0000000001100001
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCC----cchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVN----LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKI 276 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~ 276 (391)
....+.+.....+..+....+.+..|.++..+.+ ....++..+...+.-++..++..++..|.++++.....-.|.
T Consensus 285 ~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KF 364 (498)
T COG3104 285 AAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKF 364 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHH
Confidence 1222333333344444444455555555432222 234566777777888888888888888876654333333444
Q ss_pred HHHHHhHhhHHHHHHhh---cC-----CchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHH
Q 016338 277 MQSIGFIGPGVSLLCLN---YA-----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAI 347 (391)
Q Consensus 277 ~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~ 347 (391)
.+...+..++...+... .. .+.++.+....+.....-+..|.-.+++....| ...+.++++.-.....++.
T Consensus 365 alGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~ 444 (498)
T COG3104 365 ALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQT 444 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 43333333333222222 11 133444555555566666666766666666666 6778888877777666777
Q ss_pred HHHHHhhH------hhccccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 348 ISTIGTGY------FVQWLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 348 i~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
++..+.+. ..+... ....|+..+...++..+.....
T Consensus 445 l~g~va~~~~~~~~~~~~~~-~~~~F~~~g~v~i~~~~~~~~~ 486 (498)
T COG3104 445 LGGQVAGLTAVTDPAYTAFI-EGRVFGTIGVVAIVIGILLLLL 486 (498)
T ss_pred hhceecccccccchhhhhhh-hhhhHHHHHHHHHHHHHHHHHh
Confidence 66666663 222333 5566777666666555554433
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.74 E-value=1.8e-16 Score=143.20 Aligned_cols=362 Identities=16% Similarity=0.148 Sum_probs=228.5
Q ss_pred HhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCc-hHHHHHHHHHHHHHHhhh-hhhh-cc-chHHHHHHHHHHHhhh
Q 016338 11 KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGG-KKVLAWGVALWSLSTLLT-PWAA-TH-STASLLAVRAFFGLAE 86 (391)
Q Consensus 11 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~~~~~~~-~~a~-~~-~~~~~~~~r~l~G~g~ 86 (391)
|.+.+.+..|++.++..++.+++++..|.+..|.+. |+.++.+.++..+|+++. ++.. .+ .-+.++++|++.|+|.
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV 144 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence 577888899999999999999999999999999987 899999999999999998 3332 23 6788899999999998
Q ss_pred hchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh--cC-----------chhHHHHHHHHHHHHHH
Q 016338 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST--IG-----------ISGPFILFSSLGLLWLS 153 (391)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~--~g-----------wr~~f~~~~~~~~~~~~ 153 (391)
+.. ....+++++....++|.|+++....+..+|..+||.++..+..- -| +..+-++.+++.++..+
T Consensus 145 ~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v 223 (488)
T KOG2325|consen 145 GNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIV 223 (488)
T ss_pred ccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHH
Confidence 776 67799999988889999999999999999999999988776531 11 23466777777777777
Q ss_pred HHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCC
Q 016338 154 TWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNV 233 (391)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 233 (391)
......+|.+++..+.++++. .+++.+.++.+..+.++ +..+.+.+..+...+.+....+..+......+++
T Consensus 224 ~i~~~f~E~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~------~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w 295 (488)
T KOG2325|consen 224 IILFFFKEVYRGIIDKKKRSV--EEEKSDIEKVKKPKLDW------VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGW 295 (488)
T ss_pred HHHhheeecccCccccccccc--hhhccchhhhccCChhH------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhcc
Confidence 777777777655433221111 01111111111111111 1234455556666666666667777777777888
Q ss_pred CcchhhHHhhhHH-HHHHHHH-HHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHH-Hhhc--CCch----------
Q 016338 234 NLKQAAWFSAVPW-GTMAVSG-YMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL-CLNY--AKSP---------- 298 (391)
Q Consensus 234 ~~~~~~~~~~~~~-~~~~~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~---------- 298 (391)
+.+++-...+... +.+.+.. +...+..-|+++... |+.+...+........+ .... ...+
T Consensus 296 ~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~-----r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~ 370 (488)
T KOG2325|consen 296 TGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDK-----RRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAG 370 (488)
T ss_pred ccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcc-----ceeeeehHHHHHHhhheeeeeccccccccccccccccC
Confidence 7766554443322 2222222 222333333332100 22222221222211111 1111 0000
Q ss_pred -------h------HHHHHHHHH-HHhhhhccc-----chhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 016338 299 -------A------VAAVLITIA-LSLSSFSQA-----GYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 299 -------~------~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 359 (391)
| ....+..+. ....+...| ....+.+.+.|+++++++|........+..++|.+...+...
T Consensus 371 ~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~ 450 (488)
T KOG2325|consen 371 CDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTL 450 (488)
T ss_pred cCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHh
Confidence 0 000111111 111111222 334445557789999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhccC
Q 016338 360 LGSFQAFLTVTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 360 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
.| +++.+.+..+..++...++....++
T Consensus 451 ~g-~~~v~~~~~~~~l~~~~l~~~~~~r 477 (488)
T KOG2325|consen 451 SG-PRPVWIILLCLLLVVAALWIVFLKR 477 (488)
T ss_pred cC-ccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88 8888777777777766666554443
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.74 E-value=2.5e-16 Score=144.28 Aligned_cols=316 Identities=18% Similarity=0.143 Sum_probs=229.0
Q ss_pred HHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhh--chhhhHHHHhhhhcCcc
Q 016338 27 LWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEG--VAMPAMSTLTSRWFPSH 104 (391)
Q Consensus 27 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~--~~~~~~~~~i~~~~~~~ 104 (391)
.+...+.++..|.++||+|||..+.+......+..+...+ +.+|.++ +.|+..+ .......++++|....+
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~---~~~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLF---QGYWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHH---HHHHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 6777889999999999999999999999998888887744 3344333 4444433 45577788999999999
Q ss_pred chhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcc
Q 016338 105 ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDS 184 (391)
Q Consensus 105 ~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (391)
+|...+|+.+.....+..++|.+++.+.+..|.-.+|.+..+..++..+.....+||+..++++...+..+.........
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~ 224 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSS 224 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccch
Confidence 99999999999999999999999999999999999999999999999898888999876554332100000000000000
Q ss_pred cccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHH-hhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHH-HHHHH
Q 016338 185 VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLS-WMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAG-KASDS 262 (391)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr 262 (391)
...+..+..++.-.+|..+.+++..+........-.. ..+.|++..+++++++.+.+.+.......+++.+.. .+...
T Consensus 225 ~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~ 304 (463)
T KOG2816|consen 225 HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI 304 (463)
T ss_pred hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111222222345566656555555554443333 557788888999999999999888998989887666 67777
Q ss_pred HHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhh-hccccchhHHHHHHHHH
Q 016338 263 LIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQ-EIAPDCAGFLHGIANSA 341 (391)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~ 341 (391)
++.+ ..+..++..-.+......+..+.|..+....+....... .+...+... ...++++|++.++...+
T Consensus 305 l~~~---------~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~~-~pa~~s~~s~~v~~~e~g~v~~~is~i 374 (463)
T KOG2816|consen 305 LGEK---------RLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGIV-FPAIRAFASILVSPEEQGKVFGIISGI 374 (463)
T ss_pred Hhhh---------hHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcch-hHHHHhHHHhhcccccccchhhHHHHH
Confidence 7754 377788888888888888888877766665555444433 344444444 45569999999999999
Q ss_pred HHHHHHHHHHHhhHhhcc
Q 016338 342 GTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 342 ~~~g~~i~~~~~g~l~~~ 359 (391)
..+...++|.+.+.+...
T Consensus 375 ~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 375 EGLSGVVSPALYGNIFAL 392 (463)
T ss_pred HHHhhhhhHHHHHHHHHH
Confidence 999999999999988654
No 121
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.70 E-value=3.1e-15 Score=138.03 Aligned_cols=376 Identities=15% Similarity=0.093 Sum_probs=227.6
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcC-----chHHHHHHHHHHHHHHhhhhhhh--ccchHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG-----GKKVLAWGVALWSLSTLLTPWAA--THSTASL 75 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~~~~~~~~~~~a~--~~~~~~~ 75 (391)
+..|.+++++|+|+++.....+...+...+ .++.|.++|.+. ||+-++++.++..++....+... ..+....
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~ 89 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIA 89 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhH
Confidence 346788999999999999999999988765 789999999863 55667777777765555553321 2356666
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcC--ccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFP--SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLS 153 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~--~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 153 (391)
.+.-++.-+|.......+-+++.|... +++||...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+
T Consensus 90 ~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 90 VVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 777788889999999999999999873 334788888888999999999999999999999999999999888887777
Q ss_pred HHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHH-HHHHHHHHHHHHHHhhHHHHHhhhC
Q 016338 154 TWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVII-ANITNNWGYFVLLSWMPIYFNTVFN 232 (391)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g 232 (391)
......+|.++.++. +.......+.+......++.....++.+++|.+|...+ ..++............-.+..+..+
T Consensus 170 ~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~ 248 (433)
T PF03092_consen 170 VALFLLEERKVRPAD-EVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALG 248 (433)
T ss_pred HHHHhhhhccccccc-hhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccc
Confidence 767666662221111 00000000000000001223345667777888877665 2222222111110100011223344
Q ss_pred ---CCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc---------CCchhH
Q 016338 233 ---VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY---------AKSPAV 300 (391)
Q Consensus 233 ---~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~ 300 (391)
+|+...+.+..+..++..+|..+..+...+..- |+.......+.....+.-... .++.+.
T Consensus 249 gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~--------R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f 320 (433)
T PF03092_consen 249 GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSW--------RRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWF 320 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH--------HHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEE
Confidence 777777776655555555555555444333321 333333222222222211111 111122
Q ss_pred HHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccc-------hhHHHHHHHH
Q 016338 301 AAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS-------FQAFLTVTAG 372 (391)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~-------~~~~~~~~~~ 372 (391)
...-..+.-...............+..| ...|+.+++..++.++|..++..++..+.+..|- .....++..+
T Consensus 321 ~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~ 400 (433)
T PF03092_consen 321 ALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSV 400 (433)
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHH
Confidence 2222333333333334444455566666 7899999999999999999999999998876551 3444555555
Q ss_pred HHHHHHHHHHHhccCc
Q 016338 373 LYFVTTIFWNLYSTGE 388 (391)
Q Consensus 373 ~~~~~~~~~~~~~~~~ 388 (391)
+.++...+..++.+++
T Consensus 401 ~~ll~l~ll~lLp~~~ 416 (433)
T PF03092_consen 401 IQLLPLPLLFLLPPQK 416 (433)
T ss_pred HHHHHHHHHHHcCCCc
Confidence 5555555554555543
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.69 E-value=2.1e-16 Score=122.99 Aligned_cols=137 Identities=25% Similarity=0.441 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcC
Q 016338 23 QSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFP 102 (391)
Q Consensus 23 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~ 102 (391)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+...+ .++++.+.+.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFAL--SSNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 34567788899999999999999999999999998888888744 4899999999999999999999999999999999
Q ss_pred ccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 103 SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 103 ~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+++|++..++.+....+|..+++.+.+.+.+..+|++.+.+.+...++..+...+..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999999999999999888887777766666554
No 123
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.68 E-value=6.9e-14 Score=121.04 Aligned_cols=239 Identities=15% Similarity=0.116 Sum_probs=171.9
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHh
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~ 84 (391)
+-.+-+++|.++.|++.+....+...++..++.|.++||+|||+.-+..+++.+++++.. .+++++.++++|++.|+
T Consensus 57 ~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k---~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 57 LYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK---HSSNYPVLLLGRVLGGI 133 (354)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH---hccccHHHHHHHHHHHH
Confidence 334567899999999999999999999999999999999999999999999999999765 45999999999999999
Q ss_pred hhhchhhhHHHHh-hhhc----CccchhhHHHHHH-hhhhhhHHHHhhHHHHHHhhcCc--hhHHHHHHHHHHHHHHHHh
Q 016338 85 AEGVAMPAMSTLT-SRWF----PSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGI--SGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 85 g~~~~~~~~~~~i-~~~~----~~~~rg~~~~~~~-~~~~lg~~~g~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~ 156 (391)
+.+..+..--+.. .|.- |++..+.-++... ...++-.+.+.+++..+.+..+. ..+|....+..++..++..
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHH
Confidence 9998877776664 4432 3333344444333 23344455566666677776654 7789988887777777666
Q ss_pred hccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHH-HhhHHHHHhhhCCCc
Q 016338 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL-SWMPIYFNTVFNVNL 235 (391)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~ 235 (391)
..-+|+..+..+..+. .+. ....++.+.+||+++.+.+...+.-...+.+. .|.|..-.+. +.
T Consensus 214 ~~W~ENyg~~~~~~~~-~~~------------~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~---~~ 277 (354)
T PF05631_consen 214 KTWPENYGDTSSSSSL-SGS------------FREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDD---EE 277 (354)
T ss_pred hcccccCCCcccccch-HHH------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCC---CC
Confidence 6666655442211111 111 11246778889999998888888777776665 4566554221 23
Q ss_pred chhhHHhhhHHHHHHHHHHHHHHHHHH
Q 016338 236 KQAAWFSAVPWGTMAVSGYMAGKASDS 262 (391)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~dr 262 (391)
..-|++++.+.+..++|+.+..++..|
T Consensus 278 ~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 278 LPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999999999888766554
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.65 E-value=7.2e-15 Score=135.80 Aligned_cols=158 Identities=18% Similarity=0.222 Sum_probs=133.2
Q ss_pred hhHHHHhCCCh--------hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhc--cchHHH
Q 016338 6 VPLAAKFGWSS--------SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT--HSTASL 75 (391)
Q Consensus 6 ~~i~~~~~~s~--------~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~--~~~~~~ 75 (391)
|...++.|.++ ++.+...++..+...++.++.|+++||+|||+++.++.++..++..+...... ++++.+
T Consensus 232 ~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l 311 (418)
T TIGR00889 232 NGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALL 311 (418)
T ss_pred HHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHH
Confidence 44555666443 66799999999999999999999999999999999999999888766644211 134667
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHH-hhhhhhHHHHhhHHHHHHhh------cCchhHHHHHHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLST------IGISGPFILFSSLG 148 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~lg~~~g~~~~~~l~~~------~gwr~~f~~~~~~~ 148 (391)
++.+++.|++.+...+....++.|++|+|+|+++.++.+ ...++|..+||.++|.+.++ +||+..|.+.+++.
T Consensus 312 ~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~ 391 (418)
T TIGR00889 312 FLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYI 391 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHH
Confidence 788999999999888999999999999999999999997 67899999999999999987 46999999999998
Q ss_pred HHHHHHHhhccccCC
Q 016338 149 LLWLSTWTSKVTNDP 163 (391)
Q Consensus 149 ~~~~~~~~~~~~~~~ 163 (391)
++..++.+++.+|+.
T Consensus 392 ~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 392 AILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHhCCcc
Confidence 888888888877653
No 125
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.59 E-value=4.2e-14 Score=130.45 Aligned_cols=155 Identities=20% Similarity=0.209 Sum_probs=129.9
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHh
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~ 84 (391)
+|...++.|. ++.++..+.+.++..++.++.|++.||+|+|+.+..+..+..++.++.. ..++.+.+++.+++.|+
T Consensus 239 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~G~ 314 (399)
T PRK05122 239 ITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLW--LAPSPWMALIGAALTGF 314 (399)
T ss_pred HHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHH
Confidence 3444455555 3456777888899999999999999999999999998888888877763 34788888889999999
Q ss_pred hhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCC
Q 016338 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (391)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (391)
+.+...+.....+.|..|+++|+++.++.+....+|..+++.+.+.+.+..||+..|.+.+.+.++..+..+...+++|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9998888888888899999999999999999999999999999999999999999999988888777666665544444
No 126
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.58 E-value=1.7e-13 Score=129.55 Aligned_cols=161 Identities=13% Similarity=0.164 Sum_probs=122.0
Q ss_pred hhhH-HHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhh-hhhhhccchHHHHHHHHHH
Q 016338 5 VVPL-AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLL-TPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 5 ~~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~-~~~a~~~~~~~~~~~r~l~ 82 (391)
+|.+ ++++|.+..+.++..+...++..++.+..|+++||+|||+.+..+.++..++... .....+++...+++++++.
T Consensus 273 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (490)
T PRK10642 273 MPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLML 352 (490)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4554 4567999888888888899999999999999999999999988887654433322 2112335677788899999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-CchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
|++.+........++.|.+|++.|+++++........+..++|.+.+++.+.. +|+.+++...+.+++..+..+ +.||
T Consensus 353 g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pe 431 (490)
T PRK10642 353 AVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKE 431 (490)
T ss_pred HHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-Hhcc
Confidence 98877777777888899999999999999855556666788899988887765 478777776666665555444 4588
Q ss_pred CCCCC
Q 016338 162 DPCNS 166 (391)
Q Consensus 162 ~~~~~ 166 (391)
+|++.
T Consensus 432 s~~~~ 436 (490)
T PRK10642 432 TANRP 436 (490)
T ss_pred ccCCC
Confidence 87653
No 127
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.57 E-value=6.4e-14 Score=129.97 Aligned_cols=161 Identities=12% Similarity=-0.004 Sum_probs=137.9
Q ss_pred chhhHHHH-hCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 4 AVVPLAAK-FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 4 ~~~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
..|.+.++ +|.++.+.|++.+...++..++.++.+++.||.++|+.+..+..+..++.++. ...++.+...+..++.
T Consensus 245 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 322 (417)
T PRK10489 245 LYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLF--GLMPMWILAVLCLALF 322 (417)
T ss_pred hhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHH--HccchHHHHHHHHHHH
Confidence 45666666 89999999999999999999999999999999888888888888877777766 3447887788889999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccC
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
|++.+...+...+++.|..|+|+||+++++++....+|..+|+.+.|.+.+..|.+..+...+...++..++.....++.
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (417)
T PRK10489 323 GYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGEL 402 (417)
T ss_pred HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccc
Confidence 99988877888899999999999999999999999999999999999999999999999988888777666666666665
Q ss_pred CCCC
Q 016338 163 PCNS 166 (391)
Q Consensus 163 ~~~~ 166 (391)
++.+
T Consensus 403 ~~~~ 406 (417)
T PRK10489 403 RRFR 406 (417)
T ss_pred cccc
Confidence 5433
No 128
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.57 E-value=4.5e-14 Score=131.05 Aligned_cols=149 Identities=11% Similarity=0.160 Sum_probs=129.2
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhh
Q 016338 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPA 92 (391)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~ 92 (391)
+.+..+.|++.++..++..++.++.|++.||+|||+.+..+..+.+++.++.++ +++.+.++..+++.|++.+...+.
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~--~~~~~~~~~~~~l~g~~~~~~~~~ 335 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF--ATGPLEVSILKLLHAFEVPFLLVG 335 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh--cccHHHHHHHHHHHHHHHHHHHHH
Confidence 566778999999999999999999999999999999999999988888888754 488888999999999998888888
Q ss_pred HHHHhhhhcCccchhhHHHH-HHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCC
Q 016338 93 MSTLTSRWFPSHERASAIGI-CMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (391)
Q Consensus 93 ~~~~i~~~~~~~~rg~~~~~-~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (391)
...++.|.+|++.|+...+. .+....+|..+++.+.|++.+..|||..|.+.+++.++..++.++..++++
T Consensus 336 ~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 336 VFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 88999999999988887655 677889999999999999999999999999988888776666666555433
No 129
>PRK10054 putative transporter; Provisional
Probab=99.56 E-value=2.7e-13 Score=124.62 Aligned_cols=173 Identities=8% Similarity=0.053 Sum_probs=132.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 016338 199 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 278 (391)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 278 (391)
+|+++.+.+..++...+......++|.|+++++|+|+.+.++..+...+...++++..|+++||+|+| ..+
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k---------~~~ 76 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK---------RYM 76 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc---------hhH
Confidence 34577777888888888899999999999988999999999999999999999999999999999964 344
Q ss_pred HHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhh
Q 016338 279 SIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 357 (391)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 357 (391)
..+.....+....+...++.+.......+.........+.......|..| ++|+++.|+.+...++|..++|.+.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 77 LLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555655555555555544443333333333445556666667665 78999999999999999999999999987
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHH
Q 016338 358 QWLGSFQAFLTVTAGLYFVTTIFWN 382 (391)
Q Consensus 358 ~~~g~~~~~~~~~~~~~~~~~~~~~ 382 (391)
+ .| ++..|...+++.++..+...
T Consensus 157 ~-~g-~~~~f~~~~~~~~i~~i~~~ 179 (395)
T PRK10054 157 M-QS-INLPFWLAAICSAFPLVFIQ 179 (395)
T ss_pred H-hc-cCcHHHHHHHHHHHHHHHHH
Confidence 5 46 88888888877777655443
No 130
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.55 E-value=9.7e-14 Score=126.79 Aligned_cols=147 Identities=20% Similarity=0.206 Sum_probs=125.9
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHh
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~ 84 (391)
.+.+.+++|.++++.+++.+.+.++..+++++.|++.||+|||+.+.++..+..++.++..+....+...++...++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 307 (377)
T TIGR00890 228 YKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFF 307 (377)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHH
Confidence 45566888999999999999999999999999999999999999999998888888877644311123334566788888
Q ss_pred hhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHH
Q 016338 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLW 151 (391)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 151 (391)
+.+...+..+.++.|.+|+|+|+++.|+.+....+|..++|.+.+.+.++.||+..|.+.+++.++.
T Consensus 308 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 308 TWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8888878888899999999999999999999999999999999999999999999999988776654
No 131
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.54 E-value=1.1e-13 Score=131.36 Aligned_cols=146 Identities=14% Similarity=0.142 Sum_probs=115.0
Q ss_pred chhhHH-HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 4 AVVPLA-AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 4 ~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
.+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+..+.......++.+.+....++.
T Consensus 297 ~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (496)
T PRK03893 297 LLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQ 376 (496)
T ss_pred HHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHH
Confidence 356665 5899999999999999999999999999999999999999888877766655443222223444444555554
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHH
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGL 149 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~ 149 (391)
+.......+....++.|.+|+++|++.+++.+....+|..+||.+++.+.+.+||+..+...+....
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~ 443 (496)
T PRK03893 377 QMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLT 443 (496)
T ss_pred HHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence 4443344566778899999999999999999999999999999999999999999988866554433
No 132
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.53 E-value=3.8e-13 Score=123.68 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=124.6
Q ss_pred hhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHH
Q 016338 5 VVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (391)
Q Consensus 5 ~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G 83 (391)
.|. +++++|.++.+.+++.+...+...++.++.|+++||+|||+.+..+.....+..... ...++.+.+++.+++.+
T Consensus 239 ~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~l~~ 316 (393)
T PRK15011 239 MPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM--LMAHSPAILLGLQLLNA 316 (393)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH--HHHhhHHHHHHHHHHHH
Confidence 444 456789999999999888888888899999999999999998887766655554444 23477888888999998
Q ss_pred hhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
++.+...+....+..|..| ++|+++.++.+...++|..+++.+++.+.+.+||+..|.+.+++.++..+..++.
T Consensus 317 ~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 317 IYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8888777777888899997 5699999999999999999999999999999999999998887777766655543
No 133
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.53 E-value=3.1e-13 Score=122.17 Aligned_cols=151 Identities=31% Similarity=0.438 Sum_probs=137.3
Q ss_pred chhhHHHHh-CCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchH-HHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 4 AVVPLAAKF-GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKK-VLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 4 ~~~~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
..|.+.++. |.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.... .++.+...+..++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~ 274 (352)
T cd06174 197 YLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL--APSLALLLVALLL 274 (352)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHHH
Confidence 345555554 999999999999999999999999999999999999 999999999999888844 4888899999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
.|++.+...+....++.|..|+|+|++.+++.+...++|..+++.+.+.+.+..+|+..+.+.+++.++..+...
T Consensus 275 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 275 LGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999999999999999999999999999999999999999999988887666544
No 134
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=2.9e-13 Score=131.39 Aligned_cols=141 Identities=21% Similarity=0.253 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHhh
Q 016338 19 LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTS 98 (391)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~ 98 (391)
..+...+..++..++.++.|+++||+|||+++.++.++.+++.++.+++ ++...+++.+++.|++.+..++...++++
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~--~s~~~ll~~~~l~g~~~~~~~~~~~a~~a 674 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFG--NSESAMIALLCLFGGLSIAAWNALDVLTV 674 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677789999999999999999999999999999999998888544 77778888899999888888899999999
Q ss_pred hhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCC
Q 016338 99 RWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (391)
Q Consensus 99 ~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (391)
|++|.++|++++|+.+....+|.+++|.+++.+.+. +...+|++.+++.++..++.. .+||+.
T Consensus 675 El~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~ 737 (742)
T TIGR01299 675 ELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL-KLPDTR 737 (742)
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCc
Confidence 999999999999999999999999999999988764 456778887777776655555 446644
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.52 E-value=2.6e-13 Score=125.60 Aligned_cols=155 Identities=18% Similarity=0.185 Sum_probs=128.4
Q ss_pred hhhHHHHhCCChh----hHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 5 VVPLAAKFGWSSS----FLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 5 ~~~i~~~~~~s~~----~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
.|...++.+.+.. ..+.+.+...++..++.+..|++.||+|||+.+..+..+..++.+... ..++.+.+.+.++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 319 (408)
T PRK09874 242 LTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMS--FVQTPLQLGILRF 319 (408)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH--HhccHHHHHHHHH
Confidence 3444445433333 245666777888889999999999999999999999888777776663 3478888889999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
+.|++.+...+...+.+.+..|+++||+.+++.+....+|..+||.+++.+.+..||+..|.+.+++.++..+..++..+
T Consensus 320 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 320 LLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred HHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999888887776665443
Q ss_pred c
Q 016338 161 N 161 (391)
Q Consensus 161 ~ 161 (391)
+
T Consensus 400 ~ 400 (408)
T PRK09874 400 R 400 (408)
T ss_pred H
Confidence 3
No 136
>PRK12382 putative transporter; Provisional
Probab=99.52 E-value=4.8e-13 Score=123.11 Aligned_cols=151 Identities=21% Similarity=0.244 Sum_probs=128.6
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHh
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~ 84 (391)
.|...+|.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+..++.++.. ..++.+.+.+..++.|+
T Consensus 239 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~g~ 314 (392)
T PRK12382 239 VSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLW--LAPTAWVALAGAALTGA 314 (392)
T ss_pred HHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHH--HcccHHHHHHHHHHHHH
Confidence 34455566654 356667778888899999999999999999999999988888887764 34788888889999999
Q ss_pred hhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhcc
Q 016338 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKV 159 (391)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 159 (391)
+.+...+...+.+.|.+|+|+|+++.++.+....+|..++|.+.+.+.++.||+..|.+.+.+.++..+..+...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 315 GCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 999888888889999999999999999999999999999999999999999999999999988877666655443
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.52 E-value=4.9e-13 Score=123.66 Aligned_cols=151 Identities=24% Similarity=0.193 Sum_probs=124.5
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHh
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~ 84 (391)
.|.+.++.|.++.+.+...+...++..++.++.|++.||+|||+.+..+.....++.+.. ...++.+.+.+..++.|+
T Consensus 243 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~ 320 (406)
T PRK11551 243 LPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAAL--AAAPSFAGMLLAGFAAGL 320 (406)
T ss_pred HHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH--HhcCcHHHHHHHHHHHHH
Confidence 567778889999999999999999999999999999999999999888776666665555 334777777788888898
Q ss_pred hhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC-chhHHHHHHHHHHHHHHHHhh
Q 016338 85 AEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 157 (391)
+.+...+...+++.|.+|+++|++..++.+....+|..++|.+++.+.++.+ |...+.......++..+..++
T Consensus 321 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 321 FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 8887888889999999999999999999999999999999999999988754 555555555555444444443
No 138
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.51 E-value=3.2e-13 Score=127.00 Aligned_cols=152 Identities=17% Similarity=0.102 Sum_probs=116.9
Q ss_pred hhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHH
Q 016338 5 VVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (391)
Q Consensus 5 ~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G 83 (391)
+|. +++++|.|..+.++..+...++..++.+..|+++||+|||+.+.....+..++..+..+...++.+...+.+++.|
T Consensus 281 ~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 360 (467)
T PRK09556 281 SPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALG 360 (467)
T ss_pred HHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 454 5567999999999999999999999999999999999999887765544444332222233356666778888888
Q ss_pred hhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhh-hHHHHhhHHHHHHh------------hcCchhHHHHHHHHHHH
Q 016338 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHL-GNVVGLLLTPIMLS------------TIGISGPFILFSSLGLL 150 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~l-g~~~g~~~~~~l~~------------~~gwr~~f~~~~~~~~~ 150 (391)
+..............|.+|+|+||.+.|+.+...++ |..++|.+.|.+.+ ..||+..|.+..+..++
T Consensus 361 ~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~ 440 (467)
T PRK09556 361 FLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIG 440 (467)
T ss_pred HHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHH
Confidence 654333333346677999999999999999999886 77999999999999 57899999988777766
Q ss_pred HHHHHh
Q 016338 151 WLSTWT 156 (391)
Q Consensus 151 ~~~~~~ 156 (391)
..+..+
T Consensus 441 ~~~~~~ 446 (467)
T PRK09556 441 CICLMA 446 (467)
T ss_pred HHHHHH
Confidence 554444
No 139
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.51 E-value=5.2e-13 Score=124.41 Aligned_cols=169 Identities=14% Similarity=0.150 Sum_probs=130.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 280 (391)
.++...+.++..+.....+..+.|.+.++ +|.|..+.+++.+...++..+++++.|++.||+|+| ..+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r---------~~~~~ 93 (434)
T PRK11663 24 ILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR---------YFMGI 93 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc---------hhHHH
Confidence 33444555555555556777888888877 899999999999999999999999999999999954 45567
Q ss_pred HhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 016338 281 GFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 359 (391)
+.+...++.+.....++.+......++.+...+...+.......+..| ++|++++|+.+....+|..++|.+.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 94 GLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 777777777776666666555544444444445556666777778777 7899999999999999999999999999998
Q ss_pred ccchhHHHHHHHHHHHHHHHH
Q 016338 360 LGSFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 360 ~g~~~~~~~~~~~~~~~~~~~ 380 (391)
.| ++..|.+.++..++..+.
T Consensus 174 ~g-w~~~f~~~~i~~~~~~~~ 193 (434)
T PRK11663 174 YG-WRYGMMIAGIIAIVVGLF 193 (434)
T ss_pred cc-HHHHHHHHHHHHHHHHHH
Confidence 88 899988877665544433
No 140
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.51 E-value=1.6e-12 Score=122.02 Aligned_cols=175 Identities=11% Similarity=0.042 Sum_probs=137.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhh--hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTV--FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS-LIKAGYSLTLVRKIM 277 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~ 277 (391)
.++.+.+..++..+.+++...++|.|++++ +|++..+++...+...++..++.+++|+++|| +|+ |..
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~---------~~~ 81 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGT---------KKT 81 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcch---------HHH
Confidence 456666777777899999999999999987 89999999999999999999999999999999 784 456
Q ss_pred HHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-c---chhHHHHHHHHHHHHHHHHHHHHh
Q 016338 278 QSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D---CAGFLHGIANSAGTLAAIISTIGT 353 (391)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~g~~~~~~~~g~~i~~~~~ 353 (391)
+..+.....++...+...++.........+.+...+...+.......+..| + +|+++.++.+...++|..++|.+.
T Consensus 82 l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~ 161 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLA 161 (475)
T ss_pred HHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHH
Confidence 667777777777777666555444444444444445566677777777666 3 388899999999999999999999
Q ss_pred hHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 354 GYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 354 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
+.+.++.| |+..|...++..+++.+.+...+
T Consensus 162 g~l~~~~g-~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 162 GVIAENYG-YHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HHHHHhcC-hHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999888 99999888877666665554433
No 141
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.50 E-value=1.2e-12 Score=119.82 Aligned_cols=149 Identities=17% Similarity=0.203 Sum_probs=125.2
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G 83 (391)
.+|.+.++.|.++++.+++.+...++..+++++.|++.||+|+|+.+..+..+..++.+.. . ++ .......++.|
T Consensus 222 ~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~--~--~~-~~~~~~~~l~g 296 (381)
T PRK03633 222 LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM--L--SQ-AAMAPALFILG 296 (381)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH--h--hh-HHHHHHHHHHH
Confidence 3577777889999999999999999999999999999999999999988888877766544 2 22 23445677888
Q ss_pred hhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhh
Q 016338 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 157 (391)
++.....|...+.+.|..|+++++...+......++|..+||.++|.+.|+.||++.|.+.+...++..+..++
T Consensus 297 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 297 AAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 87777789999999999988888888888888999999999999999999999999999988888766554443
No 142
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.50 E-value=1e-10 Score=104.39 Aligned_cols=334 Identities=12% Similarity=0.024 Sum_probs=224.9
Q ss_pred hhhHHHH-hCCChhhHH-HHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 5 VVPLAAK-FGWSSSFLG-IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 5 ~~~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
.|.+.+. .|.+.+|+. -+.-+..=.+....++...+.|..+.|++++++.+...+...+. .+.++...+-+..+.-
T Consensus 27 ~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~ll--l~~~sv~~mq~~q~~y 104 (412)
T PF01770_consen 27 TPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLL--LFGTSVLAMQLMQFFY 104 (412)
T ss_pred hHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH--HHHCcHHHHHHHHHHH
Confidence 3444444 788888764 45556666778888999999999999999999999988888887 4459999999999999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc--CchhHHHHHHHHHHHHHHHHhhccc
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI--GISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
|++.+. ..+..+++-...|+++-.++.+...+..-+|-.++.++|..+...- +.+...++......+..+ ..+++|
T Consensus 105 g~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~-~~~fLP 182 (412)
T PF01770_consen 105 GLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALL-IALFLP 182 (412)
T ss_pred HHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHcC
Confidence 999876 4778899988899999999999999999999999999998877633 344444443333333333 333445
Q ss_pred cCCCCC---CCCC------hhHHHHHHcCCCc-----ccccC-----------CCccHHHhhcCCchHHHHHHHHHHHHH
Q 016338 161 NDPCNS---PFVS------KSELRLIQAGKSD-----SVKKR-----------NPPSLRHLLSKLPSWTVIIANITNNWG 215 (391)
Q Consensus 161 ~~~~~~---~~~~------~~~~~~~~~~~~~-----~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (391)
..+++. +..+ +.+.+..++..++ ++++. ..+++++..++|.++...+-+.+...+
T Consensus 183 ~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcg 262 (412)
T PF01770_consen 183 MPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCG 262 (412)
T ss_pred CCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhH
Confidence 544321 1100 0000000000000 00000 013455667889999999999999999
Q ss_pred HHHHHHhhHHHHHhh--hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhh
Q 016338 216 YFVLLSWMPIYFNTV--FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN 293 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (391)
+..+.+|.-...++. -+-+..-.|..-+...+.+.++.+..|++..++.+. ....+.....+.+..++++.
T Consensus 263 y~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm~ 335 (412)
T PF01770_consen 263 YYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLMS 335 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 998888888777774 123333457777777788888889999986666543 44555555666677777777
Q ss_pred cCCchhHHHHHHHHHHHhhhhcccchh-hhhhhccccchhHHHHHHHHHHHHHHHHH
Q 016338 294 YAKSPAVAAVLITIALSLSSFSQAGYL-LNIQEIAPDCAGFLHGIANSAGTLAAIIS 349 (391)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~g~~i~ 349 (391)
..++.+......++.........+... -+......|.-+...|+.+....+-..+-
T Consensus 336 ~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 336 FTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 877877777766655555444433333 33444445777888888777665544443
No 143
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.49 E-value=3.7e-12 Score=120.32 Aligned_cols=178 Identities=9% Similarity=0.079 Sum_probs=129.8
Q ss_pred HHhhcCCc-hHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHH-HHhhccchh
Q 016338 194 RHLLSKLP-SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS-LIKAGYSLT 271 (391)
Q Consensus 194 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~ 271 (391)
.+.+|+|+ ++......++..+.++....+++.|+++++|++..+++..............+++|++.|| +|+|
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r----- 88 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK----- 88 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----
Confidence 34557764 8888888889999999999999999998899999988887776665555556789999999 5854
Q ss_pred HHHHHHHHHHhHhhHHHHHHhhcCCc-hhHHHHHHHHHHHhhhhcccchhhhhhhccc-c--chhHHHHHHHHHHHHHHH
Q 016338 272 LVRKIMQSIGFIGPGVSLLCLNYAKS-PAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D--CAGFLHGIANSAGTLAAI 347 (391)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~g~~~~~~~~g~~ 347 (391)
..+..+..+..++.......++ .........+.+...+...+.......+.+| + ++..+.++.+...++|..
T Consensus 89 ----~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~ 164 (500)
T PRK09584 89 ----RVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF 164 (500)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH
Confidence 4555666666666555555432 2333333333334445555666677777766 3 345678888999999999
Q ss_pred HHHHHhhHhhccccchhHHHHHHHHHHHHHHHHH
Q 016338 348 ISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFW 381 (391)
Q Consensus 348 i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (391)
++|.+.|++.|+.| |+..|.+.++...++.+.+
T Consensus 165 ~gp~i~g~l~~~~g-~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 165 FSMLATPWLAAKYG-WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999888 9999988876666655443
No 144
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.49 E-value=1.9e-12 Score=120.01 Aligned_cols=175 Identities=11% Similarity=0.130 Sum_probs=132.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHH-HhhccchhHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL-IKAGYSLTLVRKIMQ 278 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~~~~~~~~~~~ 278 (391)
+.++......+...+.++++..++|.|+++.+|+++.+++.+.........++.+++|+++||+ |+| ..+
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr---------r~i 79 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR---------MAV 79 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH---------HHH
Confidence 4566777777888889999999999999998999999999999999999999999999999999 854 444
Q ss_pred HHHhHhhHHHHHHhhcCC-chhHHHHHHHHHHHhhhhcccchhhhhhhccc-c--chhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 279 SIGFIGPGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D--CAGFLHGIANSAGTLAAIISTIGTG 354 (391)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~g~~~~~~~~g~~i~~~~~g 354 (391)
..+.+...++...+...+ +.........+.....+...+...++..|.+| + +|.++.++.+...++|+.++|.+.|
T Consensus 80 liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH
Confidence 566666666554444322 11222222222222334445666777888777 3 6999999999999999999999999
Q ss_pred HhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 355 YFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 355 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
++.+..| |+..|...++..+++.+.+...
T Consensus 160 ~L~~~~G-w~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 160 YAQEEYS-WAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHHhhhC-hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999888 9999988877777766665543
No 145
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.49 E-value=2.5e-12 Score=118.37 Aligned_cols=170 Identities=13% Similarity=0.146 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHh
Q 016338 203 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGF 282 (391)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 282 (391)
+......++...+.+....++|.|+++++|.|+.+.|+..+...+...+.+++.|+++||+++ |..+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~---------k~~l~~~~ 83 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGA---------KPMIVTGM 83 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCc---------hHHHHHHH
Confidence 445577777888888888999999988899999999999999999999999999999999995 45556677
Q ss_pred HhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 283 IGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
....+........++.+.......+.+...+...+...+...+..| |+|+++.|+.+...++|..++|.+.|.+. ..|
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g 162 (400)
T PRK11646 84 LMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD 162 (400)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh
Confidence 7777776666666666555554444444445555666666777665 89999999999999999999999999998 556
Q ss_pred chhHHHHHHHHHHHHHHHHHHH
Q 016338 362 SFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
++..|++.+...++..++...
T Consensus 163 -~~~~f~~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 163 -FRLVCATGAVLFVLAAAFNAW 183 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHHHH
Confidence 888888887776666544433
No 146
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.49 E-value=1.6e-13 Score=128.46 Aligned_cols=147 Identities=17% Similarity=0.109 Sum_probs=121.5
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc--CchHHHHHH--HHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY--GGKKVLAWG--VALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
+|.+.+++|.+..+.+++.+...++..+++++.|+++||. ++|+...++ ..+.+++.++. ...++++.+++.++
T Consensus 264 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~--~~~~~~~~~~i~~~ 341 (455)
T TIGR00892 264 LVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLC--ALAGDYTGLVIYCI 341 (455)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHH--HHhchHHHHHHHHH
Confidence 4666778899999999999999999999999999999984 344433333 33334444444 34488888999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-CchhHHHHHHHHHHHHHH
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLS 153 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~ 153 (391)
+.|++.+...+...+++.|.+|++++++.+++.+...++|..+||.+++.+.+.. +|+..|++.+++.++..+
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999998999999999999999999999999999999999999999998877 599999998877665444
No 147
>PRK03545 putative arabinose transporter; Provisional
Probab=99.49 E-value=1.6e-12 Score=119.46 Aligned_cols=152 Identities=22% Similarity=0.161 Sum_probs=124.0
Q ss_pred hhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhh
Q 016338 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (391)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g 85 (391)
|.+.+++|.|..+.+++.+...++..+++++.|++.||+|||+.. .+..+...+..... ...++.+.+.+..++.|++
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~-~~~~~~~~~~~~~~l~g~~ 307 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLL-PAANSEWHLSVLSIFWGIA 307 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHH-HHhchHHHHHHHHHHHHHH
Confidence 345556899999999999999999999999999999999988654 44444444433221 2347778888889999999
Q ss_pred hhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccc
Q 016338 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVT 160 (391)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~ 160 (391)
.+...+.....+.|..| ++|++++++.+....+|..+||.++|.+.+++|+|..|.+.+.+.++..+......+
T Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 308 IMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 87777777888888876 688999999999999999999999999999999999999999888887776666554
No 148
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.48 E-value=1.7e-12 Score=118.64 Aligned_cols=147 Identities=12% Similarity=0.093 Sum_probs=124.4
Q ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhh
Q 016338 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEG 87 (391)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~ 87 (391)
+.+++|.++.+.+++.+.......++.++.|++.||+|||+.+.++..+..+..... ...++.+.+.+.+++.|++.+
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~g 303 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGL--AADNSLWALLMLQLLNAIFIG 303 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999888888888889999999999999999988877666555444 334778888888999999998
Q ss_pred chhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhh
Q 016338 88 VAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 88 ~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 157 (391)
...+....++.|..| ++++++.++.+....+|..++|.+++.+.+..||+..|.+.++..++..+...+
T Consensus 304 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 304 ILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 888888899999987 467799999999999999999999999999999999999988887776665443
No 149
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.48 E-value=5.3e-13 Score=117.02 Aligned_cols=179 Identities=13% Similarity=0.090 Sum_probs=152.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
+.+....+.+...++.--.+..-.|...++ .++|.++.|.+.+.+.+...++..+.|.++||.+.| ..+.
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr---------~fm~ 98 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR---------YFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc---------eeeh
Confidence 345556666777777777777777777666 789999999999999999999999999999999854 6778
Q ss_pred HHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHh--hHh
Q 016338 280 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT--GYF 356 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~--g~l 356 (391)
+++++.++..+++++.++.....++..+.+.+.+...|.....+..-+| ++||+..++-|+..++|+.+.|++. +.+
T Consensus 99 ~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~ 178 (448)
T COG2271 99 FGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFF 178 (448)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHH
Confidence 8999999999999999888888888888888888888888888887777 8999999999999999999999999 888
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHHHhccCcc
Q 016338 357 VQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGER 389 (391)
Q Consensus 357 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
.++.+ ++..|++-+++.++..+..+...|+++
T Consensus 179 ~~~~~-w~~~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 179 AFHGG-WRAAFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred Hhccc-hhHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 88876 999999998888777777666655543
No 150
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.47 E-value=9.5e-13 Score=124.26 Aligned_cols=160 Identities=21% Similarity=0.217 Sum_probs=126.4
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhh---hhcc------chHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW---AATH------STAS 74 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~---a~~~------~~~~ 74 (391)
..|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+..+..+.+++.++.++ ...+ +...
T Consensus 306 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (481)
T TIGR00879 306 YSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVA 385 (481)
T ss_pred HHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHH
Confidence 357778889999988999999999999999999999999999999999998888777776642 1112 2222
Q ss_pred HHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 016338 75 LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (391)
Q Consensus 75 ~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 154 (391)
+....+..+.......+....++.|.+|+++|++++++.+...++|..++|.+.+.+.++.+|++.|++.++++++..+.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~ 465 (481)
T TIGR00879 386 IVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIF 465 (481)
T ss_pred HHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHH
Confidence 33333333322223346667778999999999999999999999999999999999999999999999999888887777
Q ss_pred HhhccccCC
Q 016338 155 WTSKVTNDP 163 (391)
Q Consensus 155 ~~~~~~~~~ 163 (391)
..+..||++
T Consensus 466 ~~~~~~~~~ 474 (481)
T TIGR00879 466 VYFFLPETK 474 (481)
T ss_pred HheecccCC
Confidence 776666644
No 151
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.47 E-value=2.4e-12 Score=117.97 Aligned_cols=147 Identities=12% Similarity=0.032 Sum_probs=131.2
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G 83 (391)
..|...+|+|.+++++|.+.+...++..+..+..+++.||+|+|+.+.++.+...+.....+ +++|.+.++..++++|
T Consensus 227 ~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~q~l~g 304 (382)
T TIGR00902 227 FSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIG--AIEAFPLIFLLQILHC 304 (382)
T ss_pred HHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHH--hHhhHHHHHHHHHHHH
Confidence 34566678999999999999999999999999999999999999999999999999998884 4599999999999999
Q ss_pred hhhhchhhhHHHHhhhhcCccchhhHHHHHH-hhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 016338 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 154 (391)
+..+...+....++.+. |+++|++..++++ ...++|..+++.++|.+.|++|+ ..|...+.++++..++
T Consensus 305 ~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 305 GTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99999999999999998 8899999999986 57889999999999999999996 6678878777765444
No 152
>PRK10504 putative transporter; Provisional
Probab=99.46 E-value=5.5e-12 Score=118.97 Aligned_cols=174 Identities=9% Similarity=0.019 Sum_probs=134.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
+.+|...+..++.......+..+.|.+.++ +|.++.+.+...+...++..++.++.|+++||+|+| ....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r---------~~~~ 79 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR---------NIFF 79 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH---------HHHH
Confidence 357777888888888888888999999987 899999999998888899999999999999999964 3344
Q ss_pred HHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 016338 280 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 358 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 358 (391)
.+.....++.......++.+.....-.+.+...+...+.......|..| ++|+++.|..+...++|..++|.+.|.+.|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 80 TAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 4555555555554555555555555455445455555666677777767 789999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 359 WLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 359 ~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
+.| |++.|.+......+..+.....
T Consensus 160 ~~g-w~~~f~~~~~~~~l~~~~~~~~ 184 (471)
T PRK10504 160 YAS-WHWIFLINIPVGIIGAIATLML 184 (471)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHHHHh
Confidence 887 8999988777666666555544
No 153
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.46 E-value=1.6e-12 Score=123.00 Aligned_cols=160 Identities=17% Similarity=0.104 Sum_probs=122.8
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccc-hH-HHHHHHHHH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS-TA-SLLAVRAFF 82 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~-~~-~~~~~r~l~ 82 (391)
.|.+.++.|.+..+.++......+...++.++.|+++||+|||+.+..+..+.+++.++.+....++ .+ ......++.
T Consensus 294 ~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~ 373 (479)
T PRK10077 294 APEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFY 373 (479)
T ss_pred HHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 4777788898888788888888889999999999999999999999999999888877764332122 11 223334444
Q ss_pred Hhhhhc-hhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH------hhcCchhHHHHHHHHHHHHHHHH
Q 016338 83 GLAEGV-AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML------STIGISGPFILFSSLGLLWLSTW 155 (391)
Q Consensus 83 G~g~~~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~------~~~gwr~~f~~~~~~~~~~~~~~ 155 (391)
+.+.+. ..+....++.|.+|+++|++++++......+|..+++.+.+.+. +..+|+..|++.+++.++..+..
T Consensus 374 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (479)
T PRK10077 374 VAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFM 453 (479)
T ss_pred HHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHH
Confidence 444443 23677899999999999999999999999999998876665443 57889999999888877777777
Q ss_pred hhccccCCC
Q 016338 156 TSKVTNDPC 164 (391)
Q Consensus 156 ~~~~~~~~~ 164 (391)
+.+.||+++
T Consensus 454 ~~~~~e~~~ 462 (479)
T PRK10077 454 WKFVPETKG 462 (479)
T ss_pred HhccccCCC
Confidence 666666543
No 154
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.45 E-value=4.7e-12 Score=115.16 Aligned_cols=170 Identities=14% Similarity=0.081 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhH
Q 016338 204 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFI 283 (391)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~ 283 (391)
.+....+............+|.|..+ .+.++.+.+.+.+...++..++.++.|+++||+||| +.+..+..
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r---------~~~~~~~~ 72 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK---------KVMIGADL 72 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh---------HHHHHHHH
Confidence 34566667777777778888888887 799999999999999999999999999999999964 34444444
Q ss_pred hhHHHHHHhhcCC-----chhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhh
Q 016338 284 GPGVSLLCLNYAK-----SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 357 (391)
Q Consensus 284 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 357 (391)
+..+........+ +.+.......+.+...+...+....+..|..| ++|+++.|+.+....+|..++|.+.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 4444333333222 55555555555555666667777888888877 79999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 358 QWLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 358 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
+..| ++..+++.++..+++.+.....
T Consensus 153 ~~~g-~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 153 ATLG-IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHhh-HHHHHHHHHHHHHHHHHHHHhc
Confidence 9888 8888888777766665554444
No 155
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.44 E-value=6.4e-12 Score=115.50 Aligned_cols=158 Identities=12% Similarity=0.045 Sum_probs=126.6
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHh
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~ 84 (391)
+|.+.+|+|.|..+.|...+.+.++..++.+..|++.||+|||+.+..+..+..++..+.... .++.... .-++.|+
T Consensus 228 lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~--~~~l~g~ 304 (393)
T PRK09705 228 LPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL-PLQLPVL--WAMVCGL 304 (393)
T ss_pred HHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc-cchHHHH--HHHHHHH
Confidence 566667789999999999999999999999999999999999999998887777776654322 2332222 2346688
Q ss_pred hhhchhhhHHHHhhhhcC-ccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC-chhHHHHHHHHHHHHHHHHhhccccC
Q 016338 85 AEGVAMPAMSTLTSRWFP-SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTSKVTND 162 (391)
Q Consensus 85 g~~~~~~~~~~~i~~~~~-~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~~~~ 162 (391)
+.+...+.......|..+ +++|++..++.+....++..++|.+.+++.+..| |+..|.+.++..++..+......||+
T Consensus 305 g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 305 GLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred hccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 888888877777777775 5789999999999999999999999999999876 88888888877777777667777776
Q ss_pred CCC
Q 016338 163 PCN 165 (391)
Q Consensus 163 ~~~ 165 (391)
+.+
T Consensus 385 ~~~ 387 (393)
T PRK09705 385 FPQ 387 (393)
T ss_pred ccc
Confidence 544
No 156
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.43 E-value=1.1e-11 Score=113.63 Aligned_cols=171 Identities=8% Similarity=-0.081 Sum_probs=136.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
+.++......+............+|.+.++ +|.|..+.++..+...++..+++++.|++.||+|+ |..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~---------r~~~~ 72 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSL---------KHILL 72 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCcc---------HHHHH
Confidence 566777788888888888888888887766 89999999999999999999999999999999994 45566
Q ss_pred HHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 016338 280 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 358 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 358 (391)
.+....++........++.+...+.-.+.+...+...+.......+..| ++|+++.+.......++..++|++.+.+.+
T Consensus 73 ~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 73 FLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 6777777777777777777776666555555444445555566777776 689999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHH
Q 016338 359 WLGSFQAFLTVTAGLYFVTTIFW 381 (391)
Q Consensus 359 ~~g~~~~~~~~~~~~~~~~~~~~ 381 (391)
..| ++..|.+.+...++..+..
T Consensus 153 ~~g-wr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 153 EFS-WRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred hcc-HHHHHHHHHHHHHHHHHHH
Confidence 888 8999988887766655443
No 157
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.43 E-value=9.1e-12 Score=112.71 Aligned_cols=165 Identities=18% Similarity=0.247 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhh
Q 016338 206 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 285 (391)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
.+..++............|.++.+++|.|+.+.+++.+...++..++.++.|++.||+|+| ..+..+.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~l~~~~~~~ 72 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR---------RVLIIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH---------HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe---------eeEeehhhhh
Confidence 3455666666777777888666666999999999999999999999999999999999954 4666666666
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchh
Q 016338 286 GVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQ 364 (391)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~ 364 (391)
.++.......++.+......++.+...+...+....+..|..| |+|+++.+..+....+|..++|.+.+.+.+..| ++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~ 151 (352)
T PF07690_consen 73 ALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WR 151 (352)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HC
T ss_pred hhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-cc
Confidence 6663333333555555555556666667777888888888888 699999999999999999999999999998887 88
Q ss_pred HHHHHHHHHHHHHHHH
Q 016338 365 AFLTVTAGLYFVTTIF 380 (391)
Q Consensus 365 ~~~~~~~~~~~~~~~~ 380 (391)
..+++.++..++..++
T Consensus 152 ~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 152 WAFLISAILSLIAAIL 167 (352)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhh
Confidence 8999988888888775
No 158
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.43 E-value=6.9e-12 Score=115.07 Aligned_cols=168 Identities=15% Similarity=0.096 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhh
Q 016338 206 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 285 (391)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
..................|.+.++ +|.|+.+.++..+...++..++.++.|++.||+|+| ..+..+....
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r---------~~~~~~~~~~ 80 (385)
T TIGR00710 11 GCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR---------PVLLLGLFIF 80 (385)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh---------HHHHHHHHHH
Confidence 333344444555555666666555 899999999999999999999999999999999954 4455566666
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchh
Q 016338 286 GVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQ 364 (391)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~ 364 (391)
.+........++.+...+..++.+...+...+....+..|..| ++|+++.+..+....++..++|.+.+.+.+..| ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~ 159 (385)
T TIGR00710 81 ALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WH 159 (385)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HH
Confidence 6666666666666665555555555555566667777888777 789999999999999999999999999999887 88
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 016338 365 AFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~ 384 (391)
..+.+.++..++..+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 160 AIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 88888777766666555443
No 159
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.42 E-value=8.9e-11 Score=110.84 Aligned_cols=153 Identities=16% Similarity=0.079 Sum_probs=120.2
Q ss_pred hhHHHHhCCChhhHHHHHH-HHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhh-hhhc-cchHHHHHHHHHH
Q 016338 6 VPLAAKFGWSSSFLGIVQS-SFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTP-WAAT-HSTASLLAVRAFF 82 (391)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~-~a~~-~~~~~~~~~r~l~ 82 (391)
|.+.+++|.|.++.++... ...++..++.++.|+++||+|+|+.+.++..+..+..+... .+.. ++.+.+...-+++
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~ 326 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE 326 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4456779999999999984 66689999999999999999999988776665555443321 1222 4555555566666
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
.+..+...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+..||+..|.+.++++++..+.....
T Consensus 327 ~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 327 NLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666677788889999999999999999999999999999999999999999999999888888766665554
No 160
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.42 E-value=3e-11 Score=111.08 Aligned_cols=156 Identities=10% Similarity=-0.006 Sum_probs=122.8
Q ss_pred HHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc
Q 016338 215 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
..+.....+|.+.++ +|.++++.+...+...++..+++++.|.+.||+|| |..+..+..+..+.......
T Consensus 35 ~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~gr---------r~~~~~~~~~~~~~~~~~~~ 104 (394)
T PRK10213 35 VEFLPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDR---------RYVVILFAVLLTLSCLLVSF 104 (394)
T ss_pred HHHHHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc---------HHHHHHHHHHHHHHHHHHHH
Confidence 334444567776666 89999999999999999999999999999999995 45666666666766666666
Q ss_pred CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHH
Q 016338 295 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 373 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 373 (391)
.++.+...+.-.+.+...+...+.......|..| ++|+++.+......+++..++|.+.+.+.+..| ++..|.+.+.+
T Consensus 105 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~l 183 (394)
T PRK10213 105 ANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WRNVFNAAAVM 183 (394)
T ss_pred HChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HHHHHHHHHHH
Confidence 6666666666555555555566677777778777 889999999999999999999999999999888 89998887766
Q ss_pred HHHHHHHH
Q 016338 374 YFVTTIFW 381 (391)
Q Consensus 374 ~~~~~~~~ 381 (391)
.++..+..
T Consensus 184 ~~~~~l~~ 191 (394)
T PRK10213 184 GVLCIFWI 191 (394)
T ss_pred HHHHHHHH
Confidence 66554443
No 161
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.41 E-value=2e-11 Score=114.83 Aligned_cols=175 Identities=10% Similarity=0.071 Sum_probs=133.5
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHH-HHhhccchhHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS-LIKAGYSLTLVRKIMQ 278 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~~~~~~~~~~~~~~~~ 278 (391)
|.++......+...+.+++...+++.|+++.+|++.+++......+.....+..+++|+++|| +|| |..+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~---------r~~~ 84 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGT---------KRTI 84 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccch---------HHHH
Confidence 456777778888889999999999999999999999999888888887888888899999999 895 4556
Q ss_pred HHHhHhhHHHHHHhhcCCchhH-HHHHHHHHHHhhhhcccchhhhhhhccc-c--chhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 279 SIGFIGPGVSLLCLNYAKSPAV-AAVLITIALSLSSFSQAGYLLNIQEIAP-D--CAGFLHGIANSAGTLAAIISTIGTG 354 (391)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~g~~~~~~~~g~~i~~~~~g 354 (391)
..+.++..++.+......+... ......+.....+...+.......|.+| + +|+++.++.....++|..++|.+.|
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 6667666666665555443222 2233333444455566677778888776 4 4577899999999999999999999
Q ss_pred HhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 355 YFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 355 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
++.++.| |++.|.+.++...++.+.+...
T Consensus 165 ~l~~~~g-w~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 165 VIADKFG-YSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHhhC-hHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998 8999988766665555554443
No 162
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.40 E-value=2.9e-11 Score=111.87 Aligned_cols=169 Identities=10% Similarity=0.015 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHh
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 284 (391)
..+.+.+.+.-........| .+++++|.+..+.++..+...++..+++++.|++.||+|+ |..+..+.++
T Consensus 13 ~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~---------r~~~~~~~~~ 82 (412)
T TIGR02332 13 LFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGA---------RRWIAGIMVL 82 (412)
T ss_pred HHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCh---------HHHHHHHHHH
Confidence 34444444444455555555 6666799999999999999999999999999999999995 4566677777
Q ss_pred hHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc-----
Q 016338 285 PGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ----- 358 (391)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~----- 358 (391)
..+........++.......-.+.+...+...+....+..|..| ++|+++.|+.+....+|..+++.+.+.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 77777777666676665555445455555555666677788777 789999999999999999999999998874
Q ss_pred -cccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 359 -WLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 359 -~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
..| |+..|.+.++..++..++.++.
T Consensus 163 ~~~g-wr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 163 ALKG-WQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred Cccc-hhHHHHHHHHHHHHHHHHHhhc
Confidence 245 8999998777766555544443
No 163
>PRK03699 putative transporter; Provisional
Probab=99.40 E-value=4.4e-11 Score=110.07 Aligned_cols=173 Identities=12% Similarity=0.033 Sum_probs=127.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 280 (391)
-++...+..++............|.+.++ +|.|+++.+...+...++..++.++.|++.||+|+| ..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r---------~~~~~ 77 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK---------RQLIF 77 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH---------HHHHH
Confidence 34555566666666666677778887665 899999999999999999999999999999999954 45556
Q ss_pred HhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 016338 281 GFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 359 (391)
+.....+........++.+...+...+.+...+...+.......+..| ++|+.+.+..+....+++.++|.+.+.+.+.
T Consensus 78 ~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (394)
T PRK03699 78 GFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR 157 (394)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666666666666666666655555455555555555566666777777 7899999999888899999999999988754
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHH
Q 016338 360 LGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 360 ~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
..+|+..|...++..++..++.+.
T Consensus 158 ~~gw~~~f~~~~~~~~~~~~~~~~ 181 (394)
T PRK03699 158 SIEWYWVYACIGLVYVAIFILTLF 181 (394)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHh
Confidence 323899988877776665554443
No 164
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.38 E-value=2.2e-11 Score=115.33 Aligned_cols=171 Identities=10% Similarity=0.045 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHh
Q 016338 203 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGF 282 (391)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 282 (391)
..+.+..+.............|.+.++ +|.++.+.++..+...++..++.++.|++.||+||| ..+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~ 74 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR---------RLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH---------HHHHHHH
Confidence 344555666666666677778877776 899999999999999999999999999999999954 5556667
Q ss_pred HhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 283 IGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
....++.......++.......-.+.+...+...+....+..|..| ++|+++.++.+....+|..++|.+.+.+.++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~ 154 (485)
T TIGR00711 75 FAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH 154 (485)
T ss_pred HHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC
Confidence 7777777777777777666666555555556666677777888776 899999999999999999999999999999888
Q ss_pred chhHHHHHHHHHHHHHHHHHHHh
Q 016338 362 SFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
+++.|++.+...++..++....
T Consensus 155 -w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 155 -WRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred -ceehhhhhhHHHHHHHHHHHHH
Confidence 8888888776666665554443
No 165
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.38 E-value=4.9e-11 Score=105.93 Aligned_cols=176 Identities=16% Similarity=0.026 Sum_probs=154.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
...+.+.+..|.....++.....+|+..+| +|.|..++|.+.+.+..+..++.++...+.||+. ||.++.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~---------Rr~lLl 82 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLE---------RRRLLL 82 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccc---------hHHHHH
Confidence 356677888899999999999999999999 9999999999999999999999999999999999 556777
Q ss_pred HHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 016338 280 IGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 358 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 358 (391)
..+.+..++-++....++.....+.=.+.....+.+++.......+..| ++|+++.++......++..+|.+++.++-|
T Consensus 83 ~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 83 GLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 7788888888888888888888888777777777788888888777666 899999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 359 WLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 359 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
.+| |+..|+..+.+.+++.+..+..-+
T Consensus 163 ~~G-WR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 163 LFG-WRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred Hhh-HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999 999999999998888877665444
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.37 E-value=4.7e-11 Score=112.44 Aligned_cols=163 Identities=12% Similarity=0.031 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHH
Q 016338 211 TNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL 290 (391)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (391)
+.....+....+.|.+. +++|++..+.+...+...++..++.++.|+++||+|+| ..+..+.+...+..+
T Consensus 47 ~~~~~~~~~~~~~~~l~-~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r---------~~~~~~~~~~~~~~~ 116 (476)
T PLN00028 47 TCFVSTFAAAPLLPIIR-DNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR---------YGSAFLLMLTAPAVF 116 (476)
T ss_pred HHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHHHHHHHHHHHH
Confidence 33333344444555554 45899999999998888889999999999999999964 344456666666666
Q ss_pred HhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc----c-----c
Q 016338 291 CLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ----W-----L 360 (391)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~----~-----~ 360 (391)
.....++.....+.-++.+...+... .......+..| ++|+++.|+.+...++|..+++.+.+.+.+ . .
T Consensus 117 ~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~ 195 (476)
T PLN00028 117 CMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFT 195 (476)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchh
Confidence 66665665554443333322222222 23345667676 799999999998888888888777765532 1 3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 361 GSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 361 g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
| |+..|.+.+++.++..+..+++.
T Consensus 196 g-Wr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 196 A-WRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHHc
Confidence 5 88999988887777666655544
No 167
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.37 E-value=8.8e-12 Score=114.56 Aligned_cols=145 Identities=17% Similarity=0.163 Sum_probs=115.8
Q ss_pred hhhHH-HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHH--hhhhhhhccchHHHHHHHHH
Q 016338 5 VVPLA-AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLST--LLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 5 ~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~r~l 81 (391)
.|.+. +++|.++++.+...+...++..++.++.|+++||+|||+.+.....+..+.. ....+...++.+.+....++
T Consensus 242 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (394)
T TIGR00883 242 LPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLG 321 (394)
T ss_pred HHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Confidence 45544 6789999999999999999999999999999999999998776555444333 12211223567777788899
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHH-HhhhhhhHHHHhhHHHHHHhhcC-chhHHHHHHHHHH
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGIC-MGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGL 149 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~-~~~~~lg~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~ 149 (391)
.|++.+...+...+++.|.+|+++|+++.++. +....+|..++|.+++.+.++.| |+..++......+
T Consensus 322 ~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 322 LALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 99998888899999999999999999999984 56667899999999999999988 8887777665443
No 168
>PRK11043 putative transporter; Provisional
Probab=99.37 E-value=5.5e-11 Score=109.78 Aligned_cols=172 Identities=10% Similarity=0.087 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHH--HHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHh
Q 016338 205 VIIANITNNWGYFVLLSWMPIY--FNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGF 282 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 282 (391)
+....+.....+.....+.|.+ +++++|.++.+.+...+...++..++.++.|+++||+++| ..+..+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~ 78 (401)
T PRK11043 8 LVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK---------PVLLAGL 78 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc---------HHHHHHH
Confidence 3444444444555555566654 4556899999999999999999999999999999999964 3445555
Q ss_pred HhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 283 IGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
....+........++.+...+...+.+...+...+.......|..| ++++...+..+....++..++|.+.+.+.++.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g 158 (401)
T PRK11043 79 SLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG 158 (401)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5555555555555555554444333333323333344455666666 678888899988899999999999999999888
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 362 SFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
++..+.+.+...++..+.....++
T Consensus 159 -~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T PRK11043 159 -WQAIFATLFAITLLLILPTLRLKP 182 (401)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888888887777776665554443
No 169
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.37 E-value=6.3e-11 Score=109.05 Aligned_cols=168 Identities=11% Similarity=0.006 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHh
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 284 (391)
.....+....+.......+|.+.++ +|.|+.+.+...+...++..++.++.|+++||+||| ..+..+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r---------~~l~~~~~~ 77 (392)
T PRK10473 8 SFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK---------PVAIPGAAL 77 (392)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh---------HHHHHHHHH
Confidence 3444444555555666778877766 899999999999999999999999999999999954 455566666
Q ss_pred hHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccch
Q 016338 285 PGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSF 363 (391)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 363 (391)
..+........++.+.......+.+...+...+.......|..| ++|+++.+..+....++..++|.+.+.+.+..| |
T Consensus 78 ~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~ 156 (392)
T PRK10473 78 FIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-W 156 (392)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-h
Confidence 66666666665665554444344334444445556667777666 899999999999999999999999999888877 8
Q ss_pred hHHHHHHHHHHHHHHHHHHH
Q 016338 364 QAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~ 383 (391)
+..+.+.+...++..+....
T Consensus 157 ~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 157 QSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888877776666555433
No 170
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.36 E-value=9.6e-11 Score=111.03 Aligned_cols=173 Identities=13% Similarity=0.090 Sum_probs=132.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 016338 202 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 281 (391)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 281 (391)
...+++..+....-......-.|.+.++ +|.+..+.++..+.+.++.....+..|+++||+|| |..+..+
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Gr---------k~~l~~~ 77 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGF---------KRLLMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------HHHHHHH
Confidence 3445566666666667777888888776 89999999999999999999999999999999994 4666677
Q ss_pred hHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhh-hhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 016338 282 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNI-QEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 359 (391)
.....++.......++.+...+.-.+.+...+...+...... .+..| ++|+++.|+......+|..++|.+.|.+.++
T Consensus 78 ~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 78 GTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 777777777777777777666654444444444444444444 44545 8999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 360 LGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 360 ~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
.| |++.|++...+.++..++.....
T Consensus 158 ~g-wr~~f~i~~~~~~~~~~l~~~~l 182 (495)
T PRK14995 158 FY-WGSVFLINVPIVLVVMGLTARYV 182 (495)
T ss_pred CC-hHHHHHHHHHHHHHHHHHHHHhC
Confidence 88 99999888777776665554443
No 171
>TIGR00895 2A0115 benzoate transport.
Probab=99.36 E-value=1.9e-11 Score=112.53 Aligned_cols=162 Identities=12% Similarity=0.083 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHH
Q 016338 209 NITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 288 (391)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (391)
.+.............|.+.++ +|.++.+.+++.+...++..++.++.|++.||+++| ..+..+..+..++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~~~ 95 (398)
T TIGR00895 26 MLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK---------RVLLWSILLFSVF 95 (398)
T ss_pred HHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH---------HHHHHHHHHHHHH
Confidence 333334444455566666555 899999999999999999999999999999999953 4555566666666
Q ss_pred HHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHH
Q 016338 289 LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFL 367 (391)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~ 367 (391)
.......++.+...+...+.+...+...+....+..|..| ++|+++.++.+....+|..++|.+.+.+.+..| ++..+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-~~~~~ 174 (398)
T TIGR00895 96 TLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG-WRSLF 174 (398)
T ss_pred HHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-ceeeh
Confidence 6666666666655555555555555666777788888877 789999999999999999999999999999888 77777
Q ss_pred HHHHHHHHHHHHHH
Q 016338 368 TVTAGLYFVTTIFW 381 (391)
Q Consensus 368 ~~~~~~~~~~~~~~ 381 (391)
.+.+....+..+..
T Consensus 175 ~~~~~~~~~~~~~~ 188 (398)
T TIGR00895 175 YVGGIAPLLLLLLL 188 (398)
T ss_pred hhhhhHHHHHHHHH
Confidence 77754444444433
No 172
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.36 E-value=3.5e-11 Score=113.03 Aligned_cols=151 Identities=21% Similarity=0.194 Sum_probs=134.5
Q ss_pred chhhHH-HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHH
Q 016338 4 AVVPLA-AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFF 82 (391)
Q Consensus 4 ~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~ 82 (391)
++|.+. +++|.++...|++.+.+.+|..++++..+++.+|+++++.+..+.+..+++.+.. +++++.+...+.-++.
T Consensus 240 LlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~l--al~~~~~~~~~~l~l~ 317 (524)
T PF05977_consen 240 LLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLL--ALSPSFWLALIALFLA 317 (524)
T ss_pred hhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHH--hcchHHHHHHHHHHHH
Confidence 466665 5689999999999999999999999999999999999999999999988888887 4459999999999999
Q ss_pred HhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 83 GLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 83 G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
|++........++.+.+..|++.|||.++++++....+..+|..+.|.+.+.+|.+..+.+.++..++..++..
T Consensus 318 G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 318 GAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888999999999999999999999999999999999999999999999999887776555544443
No 173
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.35 E-value=6.3e-11 Score=107.48 Aligned_cols=163 Identities=9% Similarity=-0.054 Sum_probs=111.4
Q ss_pred HHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHh
Q 016338 213 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
...+..+....|.+.+| +|.|+.+.+++.+...++..++++..|++.||+||| .++..............
T Consensus 4 ~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr---------~~~~~~~~~~~~~~~~~ 73 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR---------WFLFGSLATFAAAAGRL 73 (368)
T ss_pred hHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch---------HHHHHHHHHHHHHHHHH
Confidence 34555666777777666 899999999999999999999999999999999954 23333333332322222
Q ss_pred hcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHH
Q 016338 293 NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAG 372 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~ 372 (391)
...++.......-++.+...+...+......+..++++|+++.++.+....+|..+++.+.+.+.++.| |+..|.+.++
T Consensus 74 ~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~ 152 (368)
T TIGR00903 74 LDPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAA 152 (368)
T ss_pred HHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHH
Confidence 222344444444333333333333333333333444899999999999999999999999999999888 9999988777
Q ss_pred HHHHHHHHHHHhcc
Q 016338 373 LYFVTTIFWNLYST 386 (391)
Q Consensus 373 ~~~~~~~~~~~~~~ 386 (391)
+.++..++.+...+
T Consensus 153 l~~~~~~~~~~~lp 166 (368)
T TIGR00903 153 VAAAGIILVLAALP 166 (368)
T ss_pred HHHHHHHHHHHHcC
Confidence 76666555544433
No 174
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.35 E-value=6.9e-11 Score=107.69 Aligned_cols=148 Identities=14% Similarity=0.049 Sum_probs=112.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 280 (391)
.++...+..+..+........+.|.++++++|.|+.+.+++.+...++..++.++.|++.||+|+| ..+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~ 72 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR---------YTTTL 72 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch---------HHHHH
Confidence 566777788888888888889999878778999999999999999999999999999999999954 44556
Q ss_pred HhHhhHHHHHHhhcCC-chhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc
Q 016338 281 GFIGPGVSLLCLNYAK-SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ 358 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~ 358 (391)
+.+...+........+ +.+...+..++.+...+. ......+..+..| ++|+++.++.....++|..+++.+.+.+.+
T Consensus 73 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 6666666666666655 555544443333333333 3344556677666 899999999998888888888888777665
No 175
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=1.1e-10 Score=107.87 Aligned_cols=170 Identities=10% Similarity=0.028 Sum_probs=127.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 016338 202 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 281 (391)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 281 (391)
+....+..+...+.........|.+.++ +|.|+.+.+++.+...++..++.++.|++.||+||| ..+..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r---------~~~~~~ 83 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGE-FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR---------LPMVTS 83 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH---------HHHHHH
Confidence 4455566666666666677777766555 899999999999999999999999999999999954 455566
Q ss_pred hHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccc
Q 016338 282 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 360 (391)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 360 (391)
.+...+........++.+.......+.+...+...+....+..|..| ++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 84 IVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66666666666666666665555555555555556666777777766 89999999999999999999999999988765
Q ss_pred c-chhHHHHHHHHHHHHHHHHH
Q 016338 361 G-SFQAFLTVTAGLYFVTTIFW 381 (391)
Q Consensus 361 g-~~~~~~~~~~~~~~~~~~~~ 381 (391)
+ +++..+.+.....++..+..
T Consensus 164 ~~~w~~~f~~~~~~~~~~~~~~ 185 (405)
T TIGR00891 164 GDGWRALFFISILPIIFALWLR 185 (405)
T ss_pred CccHHHHHHHHHHHHHHHHHHH
Confidence 4 37777777665555544433
No 176
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.34 E-value=5.3e-11 Score=109.28 Aligned_cols=178 Identities=13% Similarity=0.026 Sum_probs=119.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 016338 199 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 278 (391)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 278 (391)
+|.++...+.....+...+......+.+-++++|+|..+.+++.++..+...+.++..|++.||+|.| ...
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R---------~v~ 103 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR---------RWT 103 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHH
Confidence 35677777777777777777777777766656999999999999999999999999999999999965 344
Q ss_pred HHHhHhhHHHHHHhhcC-----CchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHH
Q 016338 279 SIGFIGPGVSLLCLNYA-----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIG 352 (391)
Q Consensus 279 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~ 352 (391)
..+.+...+..+..... ++.....+.-.+.+.. +...+.....+++.+| ++||++.|+....+++|..+++.+
T Consensus 104 ~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l 182 (462)
T PRK15034 104 VFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLV 182 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHH
Confidence 44555555555555432 4554444443333333 4455666677777777 789999999987777777766666
Q ss_pred hhHhh-----ccccc------------hhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 353 TGYFV-----QWLGS------------FQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 353 ~g~l~-----~~~g~------------~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
.+.+. +..|. ++....+.....++..+..++..+
T Consensus 183 ~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 183 APLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 65433 22221 445555556655555555554433
No 177
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.33 E-value=2.9e-11 Score=113.31 Aligned_cols=155 Identities=12% Similarity=0.057 Sum_probs=108.1
Q ss_pred chhhHHH-HhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc--CchHHH-HHHHHHHHHHHhhhhhhhccchHHHHHHH
Q 016338 4 AVVPLAA-KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY--GGKKVL-AWGVALWSLSTLLTPWAATHSTASLLAVR 79 (391)
Q Consensus 4 ~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~r 79 (391)
.+|.+.+ +.|.+..+.++....+.++..++.++.|+++||+ +||+.. .....+..++.+...+...++.+...+..
T Consensus 275 ~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 354 (452)
T PRK11273 275 WSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACM 354 (452)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHH
Confidence 3566544 5789999999999999999999999999999999 555432 22223333333322112223444445555
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHH-HhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVV-GLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~-g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
++.|.+..........+..|.+|+++||++.|+.+....+|..+ +|.+.+.+.++.||+..|.+.++..++.++....+
T Consensus 355 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 355 IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 55555433333334456779999999999999999888888654 79999999999999999998888777655555443
No 178
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.32 E-value=7.9e-11 Score=107.96 Aligned_cols=145 Identities=14% Similarity=0.084 Sum_probs=122.5
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHh
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~ 84 (391)
.|...+|.|.|+++.|.+.+...++..+..++.|++.||+|+|+.+..+....+++.++.++ .++.+.+++..++.|+
T Consensus 228 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~g~ 305 (382)
T PRK11128 228 SAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGS--TTALPWLIVIQILHCG 305 (382)
T ss_pred HHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHH
Confidence 35555789999999999999999999999999999999999999999999988888777744 4889999999999999
Q ss_pred hhhchhhhHHHHhhhhcCccchhhHHHHHH-hhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHH
Q 016338 85 AEGVAMPAMSTLTSRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLS 153 (391)
Q Consensus 85 g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~ 153 (391)
+.+...+....++.+. +++++++..+..+ ...++|..+||.++|.+.|.+|+ ..++..+.+.++..+
T Consensus 306 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 306 TFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 9998888889988886 5677788898886 55678889999999999999987 466666666655433
No 179
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.32 E-value=3.5e-11 Score=110.62 Aligned_cols=159 Identities=15% Similarity=0.082 Sum_probs=122.7
Q ss_pred HHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc
Q 016338 215 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
....+....|. +++++|.++.+.+++.+...++..++.++.|++.||+||| ..+..+.....+.......
T Consensus 9 ~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r---------~~~~~~~~~~~~~~~~~~~ 78 (399)
T TIGR00893 9 DRANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGAR---------KTLAVFIVIWGVFTGLQAF 78 (399)
T ss_pred HHHhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcc---------eeeHHHHHHHHHHHHHHHH
Confidence 33444455555 5555899999999999999999999999999999999965 3444555555555555555
Q ss_pred CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHH
Q 016338 295 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 373 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 373 (391)
.++.+...+..++.+...+...+....+..|..| ++|+++.++.+....+|..++|.+.+.+.+..+ ++..+...++.
T Consensus 79 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 157 (399)
T TIGR00893 79 AGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVL 157 (399)
T ss_pred HcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHH
Confidence 5666666666555555566667777888888877 899999999999999999999999999999888 88888888777
Q ss_pred HHHHHHHHHHh
Q 016338 374 YFVTTIFWNLY 384 (391)
Q Consensus 374 ~~~~~~~~~~~ 384 (391)
.++..+.....
T Consensus 158 ~~~~~~~~~~~ 168 (399)
T TIGR00893 158 GIIWGVLWLKF 168 (399)
T ss_pred HHHHHHHhhhe
Confidence 66666555443
No 180
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.32 E-value=2.2e-10 Score=105.76 Aligned_cols=162 Identities=12% Similarity=0.040 Sum_probs=111.5
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 016338 199 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 278 (391)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 278 (391)
.|.+....+..++..........+.|.++++ +|.++.+.+...+...++..++.++.|++.||+|+| +.+
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k---------~~l 81 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL---------KTM 81 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH---------HHH
Confidence 4566667777777777777777889999876 899999999999999999999999999999999964 444
Q ss_pred HHHhHhhHHHHHHh---hcC-CchhHHHHHHHHHHHhhhhcccchhhhhhhc-cccchhHHHHHHHHHHHHHH-HHHHHH
Q 016338 279 SIGFIGPGVSLLCL---NYA-KSPAVAAVLITIALSLSSFSQAGYLLNIQEI-APDCAGFLHGIANSAGTLAA-IISTIG 352 (391)
Q Consensus 279 ~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~-~i~~~~ 352 (391)
..+.....++.... ... ++.+.......+.+...+...+.......+. ++|+|++++|+.+...++|. .++|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 82 MIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44554444443322 222 2333333333332222233333344444454 55899999999999999986 589999
Q ss_pred hhHhhccccchhHHHHHHH
Q 016338 353 TGYFVQWLGSFQAFLTVTA 371 (391)
Q Consensus 353 ~g~l~~~~g~~~~~~~~~~ 371 (391)
.+.+.+..| +...++...
T Consensus 162 ~~~l~~~~g-~~~~~~~~~ 179 (402)
T TIGR00897 162 SSYAIPAFG-EMNTLWSAL 179 (402)
T ss_pred HHhcccccc-hHHHHHHHH
Confidence 999988877 444444333
No 181
>PRK09952 shikimate transporter; Provisional
Probab=99.31 E-value=1.4e-10 Score=108.18 Aligned_cols=153 Identities=12% Similarity=0.041 Sum_probs=113.4
Q ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhh-c-cchHHHHHHHHHHHhh
Q 016338 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA-T-HSTASLLAVRAFFGLA 85 (391)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~-~-~~~~~~~~~r~l~G~g 85 (391)
+.+++|.+.++...+.........++.+..|+++||+|||+.+..+.++..++........ . ++.+.+++..++.+++
T Consensus 277 ~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 356 (438)
T PRK09952 277 STQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIA 356 (438)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 4567888887766666667777788899999999999999998888776555443331111 1 3344445566777888
Q ss_pred hhchhhhHHHHhhhhcCccchhhHHHHHHhh-hhhhHHHHhhHHHHHHhhc--CchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGG-FHLGNVVGLLLTPIMLSTI--GISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~-~~lg~~~g~~~~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
.+...+...+++.|.+|.|.|+.+.++.... ..+|..++|.+.+++.+.. +|+..+...++..++..+..+. .+|
T Consensus 357 ~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~-~~~ 434 (438)
T PRK09952 357 HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALL-MKD 434 (438)
T ss_pred HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHH-ccc
Confidence 8887888899999999999999888885544 4589999999999998744 4888888877777766555543 344
No 182
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.31 E-value=7.5e-11 Score=107.93 Aligned_cols=157 Identities=12% Similarity=0.108 Sum_probs=121.6
Q ss_pred HHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC
Q 016338 216 YFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA 295 (391)
Q Consensus 216 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (391)
........|.+.++ +|.|+.+.+...+...++..++.++.|++.||+||| ..+..+.....+........
T Consensus 7 ~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~i~~~~~~~~ 76 (377)
T PRK11102 7 IDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK---------PVILGGTLVFALAAVACALA 76 (377)
T ss_pred HHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh---------HHHHHHHHHHHHHHHHHHHH
Confidence 34455677778777 899999999999999999999999999999999954 45556666666666666666
Q ss_pred CchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHH
Q 016338 296 KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLY 374 (391)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 374 (391)
++.+.......+.+...+...+.......|..| ++|+++.++.+....+|..++|.+.+.+.+..| ++..+.+.+...
T Consensus 77 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~ 155 (377)
T PRK11102 77 QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAA 155 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHH
Confidence 666555555555455555555666677777777 789999999999999999999999999999887 888888877777
Q ss_pred HHHHHHHHH
Q 016338 375 FVTTIFWNL 383 (391)
Q Consensus 375 ~~~~~~~~~ 383 (391)
++..+....
T Consensus 156 ~~~~~~~~~ 164 (377)
T PRK11102 156 ILAAALVFF 164 (377)
T ss_pred HHHHHHHHH
Confidence 666555443
No 183
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.30 E-value=4e-08 Score=90.56 Aligned_cols=254 Identities=9% Similarity=-0.031 Sum_probs=158.0
Q ss_pred hhHHHHhCC-----ChhhHHHHHHHHHHHHHHH-HHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccc--------
Q 016338 6 VPLAAKFGW-----SSSFLGIVQSSFLWGYIFS-SVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS-------- 71 (391)
Q Consensus 6 ~~i~~~~~~-----s~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~-------- 71 (391)
-++++.+.. +.+.+.++-+...+...+. .++.+++++|++|++.+-+....+.....+.++..-++
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 345566555 3367899999888877766 89999999999999999888777777776665442111
Q ss_pred ---------------------hHHHHHHHHHHHhhhhchhh-hHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHH
Q 016338 72 ---------------------TASLLAVRAFFGLAEGVAMP-AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTP 129 (391)
Q Consensus 72 ---------------------~~~~~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~ 129 (391)
.|...+.-+...+-...... .-....+|.++.+|-.|..++...+.++|..+++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333444455555444444 66788999999999999999999999999999999988
Q ss_pred HHHhh--------cCch----hHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhh
Q 016338 130 IMLST--------IGIS----GPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLL 197 (391)
Q Consensus 130 ~l~~~--------~gwr----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (391)
++.+. ..|. ..+.+.++...+.....+ .+.+...+++...+.+ +++++++.+.....+.+.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~----~~~~k~k~k~~~~es~k~i~ 261 (472)
T TIGR00769 187 YFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYW-WVNRNVLTDPRSYNPA----LKEKKVKPKMSTMESLKFLV 261 (472)
T ss_pred HHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccCCccccchh----hccccCCCCCCHHHHHHHHH
Confidence 87631 1242 233333333333333333 3322221111111111 01111111222345677889
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcch----hhHHhhhHHHHHHHHHHHHHHHHHHHHh
Q 016338 198 SKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQ----AAWFSAVPWGTMAVSGYMAGKASDSLIK 265 (391)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 265 (391)
|+|..+.+++...++......+..-.-...++.+- |+++ .|.+....++...+.+++.+++.+|+|-
T Consensus 262 ~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw 332 (472)
T TIGR00769 262 SSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGW 332 (472)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 99988888888888777777766555555555442 3322 2333444455555666677889999884
No 184
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.30 E-value=1.6e-10 Score=106.80 Aligned_cols=158 Identities=14% Similarity=0.013 Sum_probs=114.6
Q ss_pred HHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc
Q 016338 215 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
....+...+|.+.++ +|.|+.+.+...+...++..++.++.|.++||+||| ..+..+.....+.......
T Consensus 28 ~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r---------~~l~~~~~~~~~~~~~~~~ 97 (406)
T PRK15402 28 ANDMIQPGMLAVVED-FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR---------PVMLAGVAFFILTCLAILL 97 (406)
T ss_pred hhhhHhcchHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh---------HHHHHHHHHHHHHHHHHHH
Confidence 344444556655555 899999999999999999999999999999999964 3445555555655555555
Q ss_pred CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHH
Q 016338 295 AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 373 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 373 (391)
.++.+.......+.+...+...+.......|..| ++|.+..++......++..++|.+.+.+.++.| ++..+++.+++
T Consensus 98 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~-w~~~~~~~~~~ 176 (406)
T PRK15402 98 AQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP-WRGMFVLFAAL 176 (406)
T ss_pred HccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHH
Confidence 5555554444444333334444555666677666 788888999888888999999999999998877 88888888877
Q ss_pred HHHHHHHHHH
Q 016338 374 YFVTTIFWNL 383 (391)
Q Consensus 374 ~~~~~~~~~~ 383 (391)
.+++.+....
T Consensus 177 ~~~~~~~~~~ 186 (406)
T PRK15402 177 AALSFFGLWR 186 (406)
T ss_pred HHHHHHHHHH
Confidence 7776665443
No 185
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.30 E-value=9.3e-11 Score=109.49 Aligned_cols=174 Identities=14% Similarity=0.085 Sum_probs=114.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 016338 199 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 278 (391)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 278 (391)
++.++...+.....+.....+....| ++++ .|.|+.+.++..+...++..++.++.|++.||+++| ..+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~---------~~~ 94 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR---------VFL 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc---------eeh
Confidence 34444444544444444444455555 5556 599999999999999999999999999999999965 333
Q ss_pred HHHhHhhHHHHHHhhcC----CchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 016338 279 SIGFIGPGVSLLCLNYA----KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT 353 (391)
Q Consensus 279 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~ 353 (391)
..+.+..++........ ++.........+.+...+...+.......|..| ++|++++|+.+....+++.++|.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~ 174 (438)
T TIGR00712 95 PAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV 174 (438)
T ss_pred HHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence 44544555544443332 222222333333333344444445555666665 8999999999999999999999888
Q ss_pred hHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 016338 354 GYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 354 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
+...+...+|+..|++.++..++..+..+.
T Consensus 175 ~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 175 LLGMAWFNDWHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 876554333899998888777665544443
No 186
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.30 E-value=1.2e-10 Score=107.05 Aligned_cols=171 Identities=13% Similarity=0.041 Sum_probs=122.8
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 016338 199 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 278 (391)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 278 (391)
+|+++.+.+..++..+.........+...++ ++.++.+.++..+...+...+..++.|++.||++|| .++
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr---------~vl 71 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG---------RVM 71 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc---------hhh
Confidence 4677778888888777666666666666555 788888999999999999999999999999999965 344
Q ss_pred HHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhh
Q 016338 279 SIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 357 (391)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 357 (391)
..+..+..+..+......+. ...-++.+...+...|...++..|..| |+|+++.|+.+.....+..+||.++|.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 72 FIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444433332222222 222334455556677888888888877 89999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 358 QWLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 358 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
+.. +...+.+.+...+++.+.....
T Consensus 149 ~~~--~~~~~~i~~~~~~~~~~~~~~l 173 (393)
T PRK11195 149 DPH--AEAALAVCALIYLLAALFNLFI 173 (393)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHhcC
Confidence 863 5666666555555554444433
No 187
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.30 E-value=2.1e-10 Score=105.71 Aligned_cols=166 Identities=12% Similarity=0.011 Sum_probs=117.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHh
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 284 (391)
......+............|.+.++ +|.|+.+.+...+...++..++.++.|+++||+||| ..+..+...
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr---------~~~~~~~~~ 82 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR---------PVILVGMSI 82 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh---------HHHHHHHHH
Confidence 3333334444444444556666655 899999999999999999999999999999999964 444455555
Q ss_pred hHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccch
Q 016338 285 PGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSF 363 (391)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~ 363 (391)
..+........++.+.......+.+...+...+.......|..+ ++++.+.+..+....++..++|.+.+.+.+..| +
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~ 161 (394)
T PRK11652 83 FILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-W 161 (394)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-h
Confidence 56555555555555555444444333333334444555666666 788999999999999999999999999998887 8
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 016338 364 QAFLTVTAGLYFVTTIFW 381 (391)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~ 381 (391)
+..+.+.++..++..+..
T Consensus 162 ~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 162 RACYLFLLLLGAGVTFSM 179 (394)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888776665544433
No 188
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.30 E-value=1.3e-10 Score=107.00 Aligned_cols=173 Identities=13% Similarity=0.062 Sum_probs=117.3
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 016338 199 KLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQ 278 (391)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~ 278 (391)
||.+|......++.+.....+..++|.|+++++|.++.+.+...+...+...+++++.|+++||+||| +...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr-------~~~~- 72 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK-------KHLL- 72 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-------HHHH-
Confidence 57899999999999999999999999999998999999999999999999999999999999999975 2222
Q ss_pred HHHhHhhHHHH---HHhhcCCc----hhH-HHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHH
Q 016338 279 SIGFIGPGVSL---LCLNYAKS----PAV-AAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIIST 350 (391)
Q Consensus 279 ~~~~~~~~~~~---~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~ 350 (391)
.+.....+.. ......+. ... ..+..++.....+...+....+..+.. ++++...|......++|..++|
T Consensus 73 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~ 150 (396)
T TIGR00882 73 -WIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS-RNSNFEYGKARMFGCVGWALCA 150 (396)
T ss_pred -HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh-hhcccccchhhhhcccHHHHHH
Confidence 2222221111 11111111 111 111112222222333333444444432 3345577888888899999999
Q ss_pred HHhhHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 016338 351 IGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 351 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
.+.|.+.+. + ++..|+..+.+.++..++.+.
T Consensus 151 ~~~g~l~~~-~-~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 151 SIAGILFSI-D-PQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred HHHhhhhcc-C-chHHHHHHHHHHHHHHHHHHH
Confidence 999988765 5 888888887777766655544
No 189
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.29 E-value=2.5e-10 Score=103.12 Aligned_cols=181 Identities=10% Similarity=0.072 Sum_probs=145.7
Q ss_pred HHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 016338 194 RHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLV 273 (391)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 273 (391)
.+++.++....+.+......++.....+++=-++++ .+-.+..-|........+-++.-+..+++.+|+|
T Consensus 365 ~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiG--------- 434 (618)
T KOG3762|consen 365 GKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIG--------- 434 (618)
T ss_pred HHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhc---------
Confidence 356778887777777777777777777888778888 5666666666666666677778888999999999
Q ss_pred HHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHH-HHHHHHHHH
Q 016338 274 RKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAG-TLAAIISTI 351 (391)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~-~~g~~i~~~ 351 (391)
+..++..++.+...-++.+...+++|..+..-++-+...+..+....++++...| +.+.++.++..... .+|-.+|++
T Consensus 435 Hv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 435 HVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred ccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence 5567778888888888888899999999888888888888888889999998777 89999999988775 579999999
Q ss_pred HhhHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 352 GTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 352 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
++|.+.+.+| -...|..+++.+++..+......
T Consensus 515 IGG~~v~~fg-~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 515 IGGFVVERFG-ARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhhheeeh-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998 77778887777777766655443
No 190
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.28 E-value=6.3e-09 Score=94.61 Aligned_cols=314 Identities=14% Similarity=0.035 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcC
Q 016338 23 QSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFP 102 (391)
Q Consensus 23 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~ 102 (391)
.++-.....++.++.+.+.|+.|+|+.++++...+..-.+.. . -+|-+.+++...+.|+|.+..+...-.++.|..+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gf--l-~~N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGF--L-FPNSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHH--H-hcchHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 667777788999999999999999999999999988877765 2 2778889999999999999999999999999999
Q ss_pred ccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh--------cCch-h----------HHHHHHHHHHHHHHHH--hhcccc
Q 016338 103 SHERASAIGICMGGFHLGNVVGLLLTPIMLST--------IGIS-G----------PFILFSSLGLLWLSTW--TSKVTN 161 (391)
Q Consensus 103 ~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~--------~gwr-~----------~f~~~~~~~~~~~~~~--~~~~~~ 161 (391)
+|++.+..++.......+.++|..+...+..+ .+-+ . ...+.+++..+..+.. ....|.
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~ 212 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPS 212 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence 99999999999999999999887655433211 0111 0 1111111111111111 111111
Q ss_pred CCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCC--Cc-chh
Q 016338 162 DPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNV--NL-KQA 238 (391)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~-~~~ 238 (391)
+.... +.++.+ +...+..+...+++++|+...+....+..+..........|..+.-.... +. ...
T Consensus 213 ~~~~~-~~~~~~----------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ 281 (461)
T KOG3098|consen 213 KDVVN-CKSSSE----------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLI 281 (461)
T ss_pred cchhh-hhhhcc----------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHH
Confidence 11100 000000 00011112334566777777766666665555555556666655443222 22 223
Q ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcC-C-----------------chhH
Q 016338 239 AWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYA-K-----------------SPAV 300 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----------------~~~~ 300 (391)
+......+.+...+....+.+.+|.++.+ ++..+.++..+......+.... + +...
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg------~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~ 355 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFG------RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYL 355 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcc------cCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhH
Confidence 44445556677777777788888876654 4455555555544444333211 0 1223
Q ss_pred HHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 016338 301 AAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYF 356 (391)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 356 (391)
..+...+.+..-.+.....+....+..|++|..+.++...-..++..++-...+..
T Consensus 356 ~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 356 ALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 44445555555667777788888888899999999888888888777766655543
No 191
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.27 E-value=1.6e-09 Score=91.18 Aligned_cols=159 Identities=21% Similarity=0.172 Sum_probs=122.4
Q ss_pred ccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhc-----cchHHHH
Q 016338 2 SVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT-----HSTASLL 76 (391)
Q Consensus 2 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~-----~~~~~~~ 76 (391)
+.--|++++++|.|.+|...+.+...+|..+ .++.|.+.||+|+|.++.+|.+...+|..+...+.. .++|.+.
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~ 100 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMC 100 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHH
Confidence 3446889999999999999999999999887 588999999999999999999999999988755532 4678888
Q ss_pred HHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
+..++.|.+.+.....+...-.+.|| ++||.+.|+.-...+++..+-..+...+.+. +-..-+...+....+..+...
T Consensus 101 ~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~~~v~l~~~ 178 (250)
T PF06813_consen 101 LFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLPAVVCLVAM 178 (250)
T ss_pred HHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHh
Confidence 88888888877776776676778897 6899999999999999988887777666554 222333444444444444444
Q ss_pred hccccCC
Q 016338 157 SKVTNDP 163 (391)
Q Consensus 157 ~~~~~~~ 163 (391)
.+.++.|
T Consensus 179 ~~vr~~~ 185 (250)
T PF06813_consen 179 FFVRPVP 185 (250)
T ss_pred hheeccC
Confidence 4444444
No 192
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.27 E-value=2.4e-10 Score=105.12 Aligned_cols=150 Identities=19% Similarity=0.183 Sum_probs=116.1
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHH-HHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhh-h---hccchHHHHHHH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLW-GYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-A---ATHSTASLLAVR 79 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-a---~~~~~~~~~~~r 79 (391)
.+...+|.|.|++++|++...... ...++.++.|++.||+|+|+.+..+..+.++..+.... . ..++........
T Consensus 231 ~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (390)
T TIGR02718 231 SKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCS 310 (390)
T ss_pred hhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHH
Confidence 455667789999999999988764 66677899999999999999998877665333332211 1 013344445556
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCc-cchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPS-HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 154 (391)
.+.+++.+...+...+...+..++ |++++.++..+...++|..++|.++|.+.+..|++..|...+++.++..+.
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 311 AFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 666777777778888888787766 789999999999999999999999999999999999999888777665443
No 193
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.27 E-value=4.4e-10 Score=104.00 Aligned_cols=155 Identities=13% Similarity=0.062 Sum_probs=115.4
Q ss_pred HHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCc
Q 016338 218 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS 297 (391)
Q Consensus 218 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (391)
....-+|... +++|.+..+.+...+.+.++..+++++.|.++||+||| ..+..+..+..++.......++
T Consensus 34 ~~~p~l~~i~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr---------~~l~~~~~~~~~~~~~~~~a~~ 103 (413)
T PRK15403 34 LIQPGIINVV-RDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR---------PVLITGALIFTLACAATLFTTS 103 (413)
T ss_pred hhccCHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch---------HHHHHHHHHHHHHHHHHHHcCC
Confidence 3334444443 44899999999999999999999999999999999954 4555666666666666666666
Q ss_pred hhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHH
Q 016338 298 PAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFV 376 (391)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 376 (391)
.+...+.-++.+...+...+.......|..| ++++++.++.+....++..++|.+.+.+.++.| |+..|++.++..++
T Consensus 104 ~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i 182 (413)
T PRK15403 104 MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAIIAVMGLI 182 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHH
Confidence 6555554333333333334445566777777 788999999999999999999999999988877 99999988887777
Q ss_pred HHHHHHH
Q 016338 377 TTIFWNL 383 (391)
Q Consensus 377 ~~~~~~~ 383 (391)
+.+..+.
T Consensus 183 ~~~~~~~ 189 (413)
T PRK15403 183 AFVGLLL 189 (413)
T ss_pred HHHHHHH
Confidence 7665443
No 194
>PRK15075 citrate-proton symporter; Provisional
Probab=99.26 E-value=1.9e-10 Score=107.29 Aligned_cols=134 Identities=19% Similarity=0.178 Sum_probs=99.5
Q ss_pred hhhHHH-HhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHh-hhhh-hhccchHHHHHHHHH
Q 016338 5 VVPLAA-KFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTL-LTPW-AATHSTASLLAVRAF 81 (391)
Q Consensus 5 ~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~-~~~~-a~~~~~~~~~~~r~l 81 (391)
.|.+.+ ++|.+..+.++....+.++..++.++.|+++||+|||+.+..+..+..+... ...+ ...++.........+
T Consensus 261 ~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (434)
T PRK15075 261 TPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELW 340 (434)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 566544 4799999999999999999999999999999999999988876554433221 1111 112444445555666
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhh-hhhHHHHhhHHHHHHhhcCch
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGF-HLGNVVGLLLTPIMLSTIGIS 138 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~-~lg~~~g~~~~~~l~~~~gwr 138 (391)
.|++.+...+....++.|.+|+++|+.+.++..... .++..++|.+.+.+.++.|++
T Consensus 341 ~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 341 LSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 677777766777788999999999999999865444 445778999999999988864
No 195
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.26 E-value=2.9e-10 Score=105.91 Aligned_cols=162 Identities=12% Similarity=0.049 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 016338 202 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 281 (391)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 281 (391)
+....+..+.............|.+ ++++|.|+.+.++..+...++..++.++.|++.||+|+ |..+..+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~---------r~~l~~~ 89 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLI-KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGR---------KPLMMWS 89 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------hHHHHHH
Confidence 3444455555555555555555554 45589999999999999999999999999999999995 4556667
Q ss_pred hHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccc
Q 016338 282 FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 360 (391)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 360 (391)
.....++.......++.+...+.-.+.+...+...+....+..|..| ++|+++.++......+|..+++.+.+.+.+..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 90 IVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 77777766666666666665555555444445556666677777777 78999999999999999999999999998888
Q ss_pred cchhHHHHHHHHHH
Q 016338 361 GSFQAFLTVTAGLY 374 (391)
Q Consensus 361 g~~~~~~~~~~~~~ 374 (391)
| ++..+.+.....
T Consensus 170 ~-w~~~f~i~~~~~ 182 (426)
T PRK12307 170 G-WRAAFFVGLLPV 182 (426)
T ss_pred C-HHHHHHHHHHHH
Confidence 7 888887754443
No 196
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.26 E-value=3e-10 Score=105.69 Aligned_cols=152 Identities=21% Similarity=0.216 Sum_probs=129.9
Q ss_pred hHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCch--HHHHHHHHHHHHHHhhhhh--h----hccchHHHHHH
Q 016338 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGK--KVLAWGVALWSLSTLLTPW--A----ATHSTASLLAV 78 (391)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~~~~~--a----~~~~~~~~~~~ 78 (391)
.-.+++|+|.++...+.-+..+...++++.+|++.||+|.| +++..++..+.+..+..-+ . -.++-+.+.+.
T Consensus 307 ~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~ 386 (477)
T PF11700_consen 307 YATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVL 386 (477)
T ss_pred HHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHH
Confidence 34568999999999999999999999999999999999999 8888888777554444322 0 03677889999
Q ss_pred HHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC-chhHHHHHHHHHHHHHHHHhh
Q 016338 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 157 (391)
-++.|+..|..++.+.++.+|..|+++.+..+|++....-....+||.+.+.+.+..| -|..+....++.++..++..+
T Consensus 387 a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 387 AVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999886 888888877777776666544
Q ss_pred c
Q 016338 158 K 158 (391)
Q Consensus 158 ~ 158 (391)
.
T Consensus 467 v 467 (477)
T PF11700_consen 467 V 467 (477)
T ss_pred c
Confidence 3
No 197
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.26 E-value=5e-11 Score=108.94 Aligned_cols=165 Identities=11% Similarity=0.027 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHH
Q 016338 209 NITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVS 288 (391)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (391)
++..+.....+....|.+ ++++|.|..+.+++.+...++..++.++.|+++||+|+| ..+..+..+..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~~~~~~ 73 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYL-VEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR---------VFLPIGLILCAIV 73 (379)
T ss_pred hhHHHHhHHhhhhhhHHH-HHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe---------ehhHHHHHHHHHH
Confidence 344555556666667754 455899999999999999999999999999999999954 4555666666666
Q ss_pred HHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHH-HhhHhhccccchhHH
Q 016338 289 LLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTI-GTGYFVQWLGSFQAF 366 (391)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~-~~g~l~~~~g~~~~~ 366 (391)
.++....++.+...+...+.+...+...+....+..|..| ++|+++.++.+....+|..++|. +.+.+.+..+ ++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~ 152 (379)
T TIGR00881 74 NLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWV 152 (379)
T ss_pred HHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhH
Confidence 6666666666666666555555566667777888888777 78999999999999999999994 6666666666 8888
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 016338 367 LTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~ 384 (391)
+.+.+.+.++..+..+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 153 FIVPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHHHHHHHHHHHHhee
Confidence 887776666655544443
No 198
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.22 E-value=2.9e-08 Score=95.70 Aligned_cols=155 Identities=19% Similarity=0.259 Sum_probs=126.5
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc-CchHHHHHHHHHHHHHHhhhhhhhccc------hHHHH
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAATHS------TASLL 76 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~a~~~~------~~~~~ 76 (391)
+...+.+.+|.+.++...+...+....-+...++|.++|++ ||++.+.++.++..+|..+.++...++ ....+
T Consensus 10 LvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l 89 (654)
T TIGR00926 10 LVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDL 89 (654)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHH
Confidence 44556778999999999999999998999999999999975 999999999999999998875431111 23356
Q ss_pred HHHHHHHhhhhchhhhHHHHhhhhcCcc---chhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-------CchhHHHHHHH
Q 016338 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSH---ERASAIGICMGGFHLGNVVGLLLTPIMLSTI-------GISGPFILFSS 146 (391)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-------gwr~~f~~~~~ 146 (391)
++-.+..+|.|..-|...+...|.++++ +|...+.++..+.++|..+++.+.+++.+.. +|...|.+.++
T Consensus 90 ~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i 169 (654)
T TIGR00926 90 LGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAI 169 (654)
T ss_pred HHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHH
Confidence 7778888999999999999999999754 3778899999999999999999999887543 69999999888
Q ss_pred HHHHHHHHHhhc
Q 016338 147 LGLLWLSTWTSK 158 (391)
Q Consensus 147 ~~~~~~~~~~~~ 158 (391)
..++..+.....
T Consensus 170 ~m~ia~lvf~~g 181 (654)
T TIGR00926 170 LMILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHHHh
Confidence 888766655443
No 199
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.21 E-value=3e-10 Score=107.99 Aligned_cols=159 Identities=16% Similarity=0.090 Sum_probs=107.4
Q ss_pred hhhHHHHhCCChhhHHH------------HHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhcc--
Q 016338 5 VVPLAAKFGWSSSFLGI------------VQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATH-- 70 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~-- 70 (391)
.|.+.++.|.+..+.+. ......++..++.+..++++||+|||+.+.++..+.+++..+.++...+
T Consensus 311 ~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~ 390 (502)
T TIGR00887 311 QKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLS 390 (502)
T ss_pred cHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 56777778876543211 2334445666788899999999999999988888777776665433211
Q ss_pred chHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh----------cCchhH
Q 016338 71 STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST----------IGISGP 140 (391)
Q Consensus 71 ~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~----------~gwr~~ 140 (391)
+...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|.+++|.+.+.+.+. .++...
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 470 (502)
T TIGR00887 391 THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHV 470 (502)
T ss_pred hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHH
Confidence 1111111111122222223456677789999999999999999999999999999999988773 345667
Q ss_pred HHHHHHHHHHHHHHHhhccccCCC
Q 016338 141 FILFSSLGLLWLSTWTSKVTNDPC 164 (391)
Q Consensus 141 f~~~~~~~~~~~~~~~~~~~~~~~ 164 (391)
|.+.++..++..+.. ++.||++.
T Consensus 471 ~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 471 LEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred HHHHHHHHHHHHHHh-eEeccCCC
Confidence 888887777665544 56677544
No 200
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.20 E-value=1.3e-09 Score=98.71 Aligned_cols=160 Identities=14% Similarity=0.013 Sum_probs=122.1
Q ss_pred HHHhhHHHHHhhhCCCcch-hhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCc
Q 016338 219 LLSWMPIYFNTVFNVNLKQ-AAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKS 297 (391)
Q Consensus 219 ~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (391)
...+...++.+++|+++++ .|.+.+.+..+..+..++.|+++||+|.| .++..+.+.-.+...+....++
T Consensus 44 n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K---------~vL~l~~l~Wsl~t~L~~fa~S 114 (511)
T TIGR00806 44 GESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK---------PVLVLQALSFVCVWLLLLLGTS 114 (511)
T ss_pred hHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556777779999999 99999999999999999999999999954 5666677777777777766666
Q ss_pred hhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc--chhHHHHHHHHHH
Q 016338 298 PAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG--SFQAFLTVTAGLY 374 (391)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g--~~~~~~~~~~~~~ 374 (391)
...+.+.=++.+...+... ....++..-.| ++|+++.|+.+....+|.++++++.+.+. .+| +|.....+.....
T Consensus 115 l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~ 192 (511)
T TIGR00806 115 VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFM 192 (511)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHH
Confidence 6666666555555555555 66677776666 89999999999999999999999999944 444 3555566666777
Q ss_pred HHHHHHHHHhccCcc
Q 016338 375 FVTTIFWNLYSTGER 389 (391)
Q Consensus 375 ~~~~~~~~~~~~~~~ 389 (391)
.++.+..+++++.+|
T Consensus 193 ~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 193 TFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHhCCCCch
Confidence 777777777765554
No 201
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.19 E-value=1e-09 Score=102.25 Aligned_cols=152 Identities=15% Similarity=0.128 Sum_probs=98.4
Q ss_pred hhh-HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhh--hhhccchHHHHHHHHH
Q 016338 5 VVP-LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTP--WAATHSTASLLAVRAF 81 (391)
Q Consensus 5 ~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~--~a~~~~~~~~~~~r~l 81 (391)
+|. +.+++|.+..+.+...+...+...+++++.|+++||+|||+.+.++..+..+...... ....++....+..-.+
T Consensus 266 lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (432)
T PRK10406 266 MQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMC 345 (432)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 455 4466899999999999998888899999999999999999988776655433332111 1111233322222222
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhh-hHHHHhhHHHHHHhhcC-chhHHHHHHHHHHHHHHHHhh
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHL-GNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~l-g~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 157 (391)
.+...+...+....+++|++|+|.|+.++|+.+...++ .....|.+.+.+ +..| |...++..++..++..+..++
T Consensus 346 ~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 346 ALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 33333444455678889999999999999998876554 244477777755 4455 555566555555555444443
No 202
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.19 E-value=3e-09 Score=98.17 Aligned_cols=170 Identities=13% Similarity=0.047 Sum_probs=122.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Q 016338 202 SWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG 281 (391)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~ 281 (391)
++.++...+...+.........|.+ ++++|.|..+.+++.+...++..++.+..|++.||+|+ |..+..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~---------r~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSY---------KAGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc---------hHHHHHH
Confidence 4555666666666666666777766 55599999999999999999999999999999999995 4566667
Q ss_pred hHhhHHHHHHhhc---CCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhh
Q 016338 282 FIGPGVSLLCLNY---AKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 357 (391)
Q Consensus 282 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 357 (391)
..+..++...... .++.+......++.+...+...+....+..+..| +++++..++.+...++|..++|.+.+.+.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7676666655432 2344444445555555556666666666666666 78999999999999999999999998875
Q ss_pred ccc-------------------------cchhHHHHHHHHHHHHHHHHH
Q 016338 358 QWL-------------------------GSFQAFLTVTAGLYFVTTIFW 381 (391)
Q Consensus 358 ~~~-------------------------g~~~~~~~~~~~~~~~~~~~~ 381 (391)
... .+++.+|...++..++..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 126777877777666554444
No 203
>PRK10133 L-fucose transporter; Provisional
Probab=99.19 E-value=3.9e-09 Score=98.27 Aligned_cols=147 Identities=12% Similarity=0.012 Sum_probs=111.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 280 (391)
.+....+..+...+.........|.+ ++.+|.|+.+.++..+...++..++.++.|++.||+|+ |+.+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~---------r~~l~~ 96 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSY---------KAGIIT 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc---------HHHHHH
Confidence 34556666677777777788888877 66699999999999999999999999999999999995 456666
Q ss_pred HhHhhHHHHHHh---hcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 016338 281 GFIGPGVSLLCL---NYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 356 (391)
Q Consensus 281 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l 356 (391)
+..+..++.... ...++........++.+...+...+.......+..| +++...++..+....+|..++|.+.+.+
T Consensus 97 g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 97 GLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777666553 234555555555555555556666666666777777 4555678999999999999999988765
Q ss_pred h
Q 016338 357 V 357 (391)
Q Consensus 357 ~ 357 (391)
.
T Consensus 177 ~ 177 (438)
T PRK10133 177 I 177 (438)
T ss_pred H
Confidence 4
No 204
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.18 E-value=2.8e-10 Score=106.33 Aligned_cols=123 Identities=17% Similarity=0.202 Sum_probs=105.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHH
Q 016338 15 SSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMS 94 (391)
Q Consensus 15 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~ 94 (391)
++.+.+++.+...++..++.+++++++||+|+|+.+..+..+..++.+...+. .++.+.+.+..++.|++.+...+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA-GSNLPLILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677888888899999999999999999999999999998888877766332 24567777888899999999889999
Q ss_pred HHhhhhcC-------ccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCch
Q 016338 95 TLTSRWFP-------SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGIS 138 (391)
Q Consensus 95 ~~i~~~~~-------~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr 138 (391)
++++|..| ++++|...++.+....+|..+++.+.+.+.+..||.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99998865 456799999999999999999999999998877763
No 205
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.17 E-value=9.6e-10 Score=99.77 Aligned_cols=149 Identities=15% Similarity=0.063 Sum_probs=105.9
Q ss_pred HHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCch
Q 016338 219 LLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP 298 (391)
Q Consensus 219 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (391)
....+|.+.++ +|+|..+.++..+...++..++.+..|++.||+++| +.+..+.....++.... ..++.
T Consensus 19 ~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~~~~~~~~~~~~~~~~-~~~~~ 87 (355)
T TIGR00896 19 VGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE---------RSVAAGLLLIAAGILIR-SAPGT 87 (355)
T ss_pred CcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch---------HHHHHHHHHHHHHHHHH-HhccH
Confidence 34566766665 899999999999999999999999999999999965 33444554444444444 33444
Q ss_pred hHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccc-hhHHHHHHHHHHHHH
Q 016338 299 AVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS-FQAFLTVTAGLYFVT 377 (391)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~ 377 (391)
+.......+.+...+...+.......+..|++|+++.+..+....+|..+++.+.+.+.+..+. ++..|...++..++.
T Consensus 88 ~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 88 ALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 4444433333333344444455566777788999999999999999999999999999877543 677776665544444
Q ss_pred H
Q 016338 378 T 378 (391)
Q Consensus 378 ~ 378 (391)
.
T Consensus 168 ~ 168 (355)
T TIGR00896 168 L 168 (355)
T ss_pred H
Confidence 3
No 206
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.17 E-value=6.5e-10 Score=98.04 Aligned_cols=145 Identities=19% Similarity=0.251 Sum_probs=124.7
Q ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhc
Q 016338 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (391)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~ 88 (391)
.+++|++..++..+.-...+..+++++++|++.||+|.|+++.++.++..+.++.. .+...-..+.+.-.+.|...|.
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~--~~~~~~~~f~i~gll~g~s~G~ 357 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYL--IFLEGELDFWILGLLVGTSLGG 357 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHH--HHccccHHHHHHHHHHHHhcch
Confidence 45899999999999999999999999999999999999999999999988888765 3335566667778899999999
Q ss_pred hhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC-chhHHHHHHHHHHHHHHHH
Q 016338 89 AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTW 155 (391)
Q Consensus 89 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~ 155 (391)
.+..+.++.++..|++|-++.+|+++.....+..+||.+.+.+.+..| -|..+....++..+..++.
T Consensus 358 ~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 358 AQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 999999999999999999999999999999999999999999888654 6666666665555544443
No 207
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.16 E-value=4.6e-08 Score=89.14 Aligned_cols=328 Identities=12% Similarity=0.026 Sum_probs=181.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhh----hhc--c----chHHH---HHHHHHHHhh
Q 016338 19 LGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW----AAT--H----STASL---LAVRAFFGLA 85 (391)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~----a~~--~----~~~~~---~~~r~l~G~g 85 (391)
.+...-.-.+...+.++..|.+.||..|.++...+.+..-++..++.. .+. + +-+.. ++.-.+.|.-
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 344444555667788899999999999999877776554333222211 111 1 11111 2212222221
Q ss_pred hhc-hhhhHHHHhhhhc------CccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 86 EGV-AMPAMSTLTSRWF------PSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 86 ~~~-~~~~~~~~i~~~~------~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
.-. ......+.=.||. +++++.+..+...-.--..-+++|++.|.+.+..+.+....+.+...++...+-+++
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1112222224553 244566777777777778899999999999998888888887777777655544433
Q ss_pred c-------ccCCCCCCCCChhHHHHHHcCCCcc-----------cccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHH
Q 016338 159 V-------TNDPCNSPFVSKSELRLIQAGKSDS-----------VKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLL 220 (391)
Q Consensus 159 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (391)
. |+-.++++..++++.+..++..+++ .-++...+++..+++|.+. ..+...+.++...++.
T Consensus 200 l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vfl-as~alalLY~TVLsf~ 278 (432)
T PF06963_consen 200 LARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFL-ASFALALLYFTVLSFG 278 (432)
T ss_pred HHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHH-HHHHHHHHHHHHhcCc
Confidence 2 2211111111111110000000000 0011124556666666444 4455555555566677
Q ss_pred HhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCch--
Q 016338 221 SWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP-- 298 (391)
Q Consensus 221 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 298 (391)
.....|+.++ |+++...|.+-+.-.+.++.+..+..++.+|+|..+... .-+..-.....++...+....++
T Consensus 279 ~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~-----~~l~~q~~~L~~~v~~~~~~~~~~~ 352 (432)
T PF06963_consen 279 GLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGL-----WSLWWQWVCLALCVVSFWAPGSPFS 352 (432)
T ss_pred HHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHH-----HHHHHHHHHHHHHHHHHhcCCCCch
Confidence 8888999995 999999999999999999999999999999999652111 11111122222222222222222
Q ss_pred hHHHHHHHHHHH----hhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHh
Q 016338 299 AVAAVLITIALS----LSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGT 353 (391)
Q Consensus 299 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~ 353 (391)
......++.+.. ..-.+-.....+.+|..| ++||+..|.-+...++...+.-.+.
T Consensus 353 ~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ 412 (432)
T PF06963_consen 353 SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLT 412 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222222 122233344555666555 8999999999999988776655443
No 208
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.16 E-value=3e-09 Score=98.23 Aligned_cols=168 Identities=10% Similarity=0.067 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHH-----HhhccchhHHHHHHHHH
Q 016338 206 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL-----IKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----~~~~~~~~~~~~~~~~~ 280 (391)
...++.+...+.....-+|.|+++ .|+|.++.|++...... .+..++.|.++||+ ||| |..+..
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~r--------r~~l~~ 73 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRR--------RGWLLL 73 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcc--------hhHHHH
Confidence 455666777778888999999999 69999999998666554 58889999999999 553 344445
Q ss_pred HhHhhHHHHHHhhcCC---chhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 016338 281 GFIGPGVSLLCLNYAK---SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 356 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l 356 (391)
+....++....+...+ +.+......++.........+...++..|..| |+|+++.++......+|..+++.+.+.+
T Consensus 74 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 74 TQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred HHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 5555554444444432 23333333333445555566777888888777 6799999999998899999999999999
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 357 VQWLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 357 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
.+...+++..|++.++..++..+.....
T Consensus 154 ~~~~~gw~~~f~i~a~~~l~~~l~~~~~ 181 (402)
T PRK11902 154 ADRVLGWGNTYLLMAGLMLAGALTTLWA 181 (402)
T ss_pred HhcccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 8864238999988887776665544433
No 209
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.15 E-value=7.3e-10 Score=85.78 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=99.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhh
Q 016338 242 SAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLL 321 (391)
Q Consensus 242 ~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (391)
.+...++..++.+..+++.||+++| ..+..+.....+........++.+.......+.....+...+....
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRK---------PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchh---------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3455677888999999999999854 3444555555555555555555555555555555555555666777
Q ss_pred hhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 322 NIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 322 ~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
...|..| ++|++..+..+....++..++|.+.+.+.+..+ ++..+.+......++.+......+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCC
Confidence 7788777 789999999999999999999999999998877 888888877777777666555443
No 210
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.13 E-value=2.9e-09 Score=93.89 Aligned_cols=176 Identities=16% Similarity=0.118 Sum_probs=120.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
|+++.-.+.....+..++.+....+.+ ++++|+|+.|.+++.++..+.+.+.+++.|.+.||+|.| +...
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~~i-~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR---------~~~~ 83 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGVFI-KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR---------KWTI 83 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch---------HHHH
Confidence 445555555555555555555555444 466999999999999999999999999999999999965 3333
Q ss_pred HHhHhhHHHHHHhhcCC--chhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 016338 280 IGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYF 356 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l 356 (391)
.+.++..+-.+...... ........+.+..+..+..........++.+| |++|.+.|+.. .+++|..+...+.+.+
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 44444444433333322 22223333333344445555666667777777 89999999999 9999999999999999
Q ss_pred hccccc--hhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 357 VQWLGS--FQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 357 ~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
....|. ++....+.....++..+..++..+
T Consensus 163 ~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 163 AVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 988773 667777777777776666655443
No 211
>TIGR00898 2A0119 cation transport protein.
Probab=99.12 E-value=1.7e-09 Score=103.14 Aligned_cols=140 Identities=16% Similarity=0.151 Sum_probs=108.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHhhhh
Q 016338 21 IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRW 100 (391)
Q Consensus 21 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~ 100 (391)
+......+....+.+..+++.||+|||+.+.++.++.+++.++..+....+.+...+.-++.+++.+...+....+.+|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33344556677888999999999999999999999888888777443222224555566677777777778889999999
Q ss_pred cCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCC
Q 016338 101 FPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (391)
Q Consensus 101 ~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (391)
+|++.|+.++|+.+....+|.+++|.+.+ + +..++..++.+.+...++..+... ++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 99999999999999999999999999988 3 445677788888877777666554 456644
No 212
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.11 E-value=5.5e-09 Score=109.30 Aligned_cols=183 Identities=10% Similarity=-0.007 Sum_probs=119.4
Q ss_pred HHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHH----HHhhhCCC-cchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhcc
Q 016338 194 RHLLSKLPSWTVIIANITNNWGYFVLLSWMPIY----FNTVFNVN-LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGY 268 (391)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~ 268 (391)
++++++++++.+....++..+.......-++.+ +.+..+.+ ....++..+...+..++..++.|+++||+++|
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk-- 82 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKA-- 82 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHH--
Confidence 456778888777776666665544332222222 22212221 23466777788888999999999999999975
Q ss_pred chhHHHHH--HHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHH
Q 016338 269 SLTLVRKI--MQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLA 345 (391)
Q Consensus 269 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g 345 (391)
+.. ................ ..++.+.+++..++.+...+...+...+.+.+..| ++++.++|+.++...+|
T Consensus 83 -----~~~~~~~~~~~~~~~~~~~~~-~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig 156 (1140)
T PRK06814 83 -----KLAKILKFAEIGIAALAIYGF-HLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIA 156 (1140)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHH
Confidence 321 1112222222222222 22556666666666666667777888888888777 88999999999999999
Q ss_pred HHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 346 AIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 346 ~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
..+||.++|.+.+..| +...|.......+++.++....+
T Consensus 157 ~~igp~l~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 195 (1140)
T PRK06814 157 ILLGTIIGGLATISGN-FVILVALLMGIAVLGWLASLFIP 195 (1140)
T ss_pred HHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999877 77777555555555554444443
No 213
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.10 E-value=2.5e-09 Score=96.18 Aligned_cols=149 Identities=11% Similarity=0.130 Sum_probs=129.2
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHH
Q 016338 15 SSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMS 94 (391)
Q Consensus 15 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~ 94 (391)
++...|.+.+...+.-++...+..++.+|+|.|+.++++..+.++=..++++ ++|.+.+...+.+.|+-.+.......
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~--~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGF--ATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhh--hcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456899999999999999999999999999999999999999998888854 49999999999999999999999999
Q ss_pred HHhhhhcCccchhhHHHHH-HhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCCCC
Q 016338 95 TLTSRWFPSHERASAIGIC-MGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDPCN 165 (391)
Q Consensus 95 ~~i~~~~~~~~rg~~~~~~-~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (391)
.++++.+|+|-.++...+. +...++|..+.+.++|.+.|+.|.+.+|++.+.+.++..++..+.+++++++
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 9999999988777777774 7899999999999999999999999999999999888888888777665544
No 214
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.09 E-value=1.4e-07 Score=84.43 Aligned_cols=318 Identities=17% Similarity=0.147 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHhhh
Q 016338 20 GIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSR 99 (391)
Q Consensus 20 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~ 99 (391)
+.+.-+--+...+..+.+.++.+|+..+.=......+..++.++. +++++.+.-+++-.+.+++.|........+..
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~v--a~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLV--AFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhhe--eeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 445555556667777788889999886655666666778888888 55599999999999999999998877777644
Q ss_pred hcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCc--hhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhH----
Q 016338 100 WFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI--SGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSE---- 173 (391)
Q Consensus 100 ~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 173 (391)
.+++ ..++-++++.+.+.++|+..-..+.+ .|+ |..+.+...+.++..+..++.+|+++.+++..++++
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~~~ 213 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESEDEA 213 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCcc
Confidence 5653 35788888888888888877655555 554 778888888877766666666654433222111111
Q ss_pred -HHHHHcCCC-cccccCCCccHHHhhc-CCchHHHHHHHHHHHHHHHHHHH-hhHHHHH-hhhCCCcchhhHHhhhHHHH
Q 016338 174 -LRLIQAGKS-DSVKKRNPPSLRHLLS-KLPSWTVIIANITNNWGYFVLLS-WMPIYFN-TVFNVNLKQAAWFSAVPWGT 248 (391)
Q Consensus 174 -~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~g~~~~~~~~~~~~~~~~ 248 (391)
++..+++.. .+.+...+...++-++ -|......+-.+..++..+..+. ..|...- ....-...+..+....+.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~YQ~G 293 (402)
T PF02487_consen 214 EDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLLYQLG 293 (402)
T ss_pred cccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHHHHHH
Confidence 000111000 0111111222332222 12222244444445555554443 2333221 21111223444555666666
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHH---HhhcCCchhHHHHHHHHHHHhhhhcccch-hhhhh
Q 016338 249 MAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLL---CLNYAKSPAVAAVLITIALSLSSFSQAGY-LLNIQ 324 (391)
Q Consensus 249 ~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 324 (391)
..++|--...+ |++ +.+++.+....-.+.++ .+.+.++.+..+..++.-+..++..+... ..+..
T Consensus 294 VFISRSS~~~~--rir---------~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~ 362 (402)
T PF02487_consen 294 VFISRSSLPFF--RIR---------RLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISE 362 (402)
T ss_pred Hhhhhcceeee--ehh---------hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 66665432221 221 22222222222211111 12233455555555555445555444444 44455
Q ss_pred hccccchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 016338 325 EIAPDCAGFLHGIANSAGTLAAIISTIGTGYF 356 (391)
Q Consensus 325 ~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 356 (391)
|..+++|..++|.....-..|..++..+.-.+
T Consensus 363 ~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 363 EVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred cCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56669999999999888888877777665443
No 215
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.07 E-value=3.6e-09 Score=95.48 Aligned_cols=184 Identities=11% Similarity=0.139 Sum_probs=150.0
Q ss_pred HhhcCC-chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhC----CCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 016338 195 HLLSKL-PSWTVIIANITNNWGYFVLLSWMPIYFNTVFN----VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYS 269 (391)
Q Consensus 195 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 269 (391)
..+++| .++.+...-+.--++++++...+..|+..+.+ +|++++.-+...+..-.-+..+++||++||+-.
T Consensus 15 ~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG---- 90 (498)
T COG3104 15 KFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLG---- 90 (498)
T ss_pred ccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 344544 57777788888889999999999999988888 999999988888888888889999999999743
Q ss_pred hhHHHHHHHHHHhHhhHHHHHHhhcCC--chhHHHHHHHHHHHhhhhcccchhhhhhhccc--c-chhHHHHHHHHHHHH
Q 016338 270 LTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP--D-CAGFLHGIANSAGTL 344 (391)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~g~~~~~~~~ 344 (391)
++..+.++.+++.++.+++...+ ......+...+.....+..-+.......|.+| | +|-.+.++.....++
T Consensus 91 ----~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi 166 (498)
T COG3104 91 ----TRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI 166 (498)
T ss_pred ----hhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh
Confidence 44566788888888888887764 45555555555556667777888888888776 2 467788888888999
Q ss_pred HHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccC
Q 016338 345 AAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 345 g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
|+.++|.+.+++.++.| |+..|...++-+.++.+.++..+|.
T Consensus 167 Gsl~~p~i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~r~ 208 (498)
T COG3104 167 GSLIAPIITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGRRH 208 (498)
T ss_pred HHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHccch
Confidence 99999999999999999 9999999999999999988887754
No 216
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.06 E-value=1.4e-09 Score=101.80 Aligned_cols=155 Identities=19% Similarity=0.201 Sum_probs=136.2
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcC--chHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYG--GKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRA 80 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~ 80 (391)
..+|...++.+.+..+.+.+.++..+...++.+..|.++|+.. ++....++++..+++.+.+++ .++++.+...-.
T Consensus 319 ~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~--~~~~~~l~~~~~ 396 (509)
T KOG2504|consen 319 VYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPF--ATTYVGLIVFSI 396 (509)
T ss_pred HHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHH--hccHHHHHHHHH
Confidence 3567888899999999999999999999999999999999988 445667777777777777744 499999999999
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC-chhHHHHHHHHHHHHHHHHhhcc
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG-ISGPFILFSSLGLLWLSTWTSKV 159 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~ 159 (391)
+.|+..|........++.|..+.++...+.|+.....+++..+||++.+.+.+..| |...|+..++..++....++...
T Consensus 397 ~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 397 LFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999988888899999999999999999999999999999999999988877 99999999888887766555443
No 217
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.06 E-value=9.6e-09 Score=94.29 Aligned_cols=161 Identities=17% Similarity=0.207 Sum_probs=127.7
Q ss_pred hhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhh-ccchH------HHHHH
Q 016338 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA-THSTA------SLLAV 78 (391)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~-~~~~~------~~~~~ 78 (391)
..+-++-|.+..+..+..........+..+.+..+.||+|||+.++.+..+..+..++..... -.+.. ..+++
T Consensus 294 t~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~ 373 (485)
T KOG0569|consen 294 TSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAA 373 (485)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 356677799999999999999999999999999999999999999999999988887764431 11111 12333
Q ss_pred HHHHHhhhhc-hhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhh
Q 016338 79 RAFFGLAEGV-AMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 79 r~l~G~g~~~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 157 (391)
.++..++.+. .-|...-+.+|.+|++.|..++++......+...+-...-..+.+.+|= ..|....+..++..+..++
T Consensus 374 ~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~ 452 (485)
T KOG0569|consen 374 IFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYR 452 (485)
T ss_pred HHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHH
Confidence 3333333332 2378888999999999999999999999999988888888888777775 7888889999999999999
Q ss_pred ccccCCCCCC
Q 016338 158 KVTNDPCNSP 167 (391)
Q Consensus 158 ~~~~~~~~~~ 167 (391)
.+||++.+..
T Consensus 453 ~lPETkgr~~ 462 (485)
T KOG0569|consen 453 YLPETKGRTP 462 (485)
T ss_pred hCcccCCCCH
Confidence 9999876543
No 218
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.06 E-value=1.1e-10 Score=103.61 Aligned_cols=177 Identities=11% Similarity=0.026 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHh
Q 016338 203 WTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGF 282 (391)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~ 282 (391)
..+.+.......-.+.+....+. .++.+|.+....|++.....+...+..++.|++.||++ |+.++.++.
T Consensus 36 ~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryN---------R~~v~~vG~ 105 (493)
T KOG1330|consen 36 VILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYN---------RKRVIAVGI 105 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcC---------cceEEeeHH
Confidence 33444444444444444443333 34458999999999999999999999999999999999 556667777
Q ss_pred HhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc
Q 016338 283 IGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG 361 (391)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g 361 (391)
.+=.++.+..+.....|...++=.+.+.....+.+...+.+.|.+| ++|++..++.+....+|..+|-...+.+.+..+
T Consensus 106 ~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 106 FIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 7777777777766666666666666666677788888999999999 799999999999999999999999999999988
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhccCcc
Q 016338 362 SFQAFLTVTAGLYFVTTIFWNLYSTGER 389 (391)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
+|++.|...+++.++..++..++.++++
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 8999999999999999888877776654
No 219
>PRK09848 glucuronide transporter; Provisional
Probab=99.06 E-value=3e-09 Score=99.69 Aligned_cols=128 Identities=20% Similarity=0.191 Sum_probs=103.1
Q ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhch
Q 016338 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (391)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~ 89 (391)
+.+|.++...++......++..++.++.+++.||+|+|+.+.++..+..++.++..+...++.+.+.+..++.|+|.+..
T Consensus 257 ~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~ 336 (448)
T PRK09848 257 YVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVT 336 (448)
T ss_pred eecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHH
Confidence 34565555555555555677888999999999999999999999998888877764432346777777888999999999
Q ss_pred hhhHHHHhhhhcCcc-------chhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCc
Q 016338 90 MPAMSTLTSRWFPSH-------ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (391)
Q Consensus 90 ~~~~~~~i~~~~~~~-------~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gw 137 (391)
.+...++.+|..|.+ ++|...+..+....+|..+|+.+.+.+.+..|+
T Consensus 337 ~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 337 MTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999888654 358999999999999999999999988776665
No 220
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.05 E-value=8.6e-09 Score=95.51 Aligned_cols=179 Identities=11% Similarity=0.049 Sum_probs=127.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHH----HHhhccchhHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDS----LIKAGYSLTLVRKI 276 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~~~~~~~~~~~~~~ 276 (391)
+........+...+.+.....+.+.|+++ +|.++...+.+.....+.+.+.+++.|+++|| +||| +.
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR--------rp 75 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR--------RP 75 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh--------HH
Confidence 34455666666777888888899999877 89999999999999999999999999999995 8874 44
Q ss_pred HHHHHhHhhHHHHHHhhcCCch-----------------hHHHHHHHHHHHhhhhcccchhhhhhhccc-cch--hHHHH
Q 016338 277 MQSIGFIGPGVSLLCLNYAKSP-----------------AVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCA--GFLHG 336 (391)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~g 336 (391)
.+..+.....+.+.++...++. ........+.-.......+...++..|..| ++| +.+.+
T Consensus 76 ~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 76 FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHH
Confidence 4555555566665555543321 111222223333444455566778888877 433 68999
Q ss_pred HHHHHHHHHHHHHHHHhhHh--hccc------------cchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 337 IANSAGTLAAIISTIGTGYF--VQWL------------GSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 337 ~~~~~~~~g~~i~~~~~g~l--~~~~------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
+.+....+|+.+++.+.+.. .+.. .+++..|.+.+++.+++.+...+..|++
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 99999999999999998865 2221 1477889998888888888777665543
No 221
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.05 E-value=6e-09 Score=92.29 Aligned_cols=129 Identities=19% Similarity=0.201 Sum_probs=106.0
Q ss_pred hCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhh
Q 016338 12 FGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMP 91 (391)
Q Consensus 12 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~ 91 (391)
+|.++++.+...+.+..+..++.+..+++.||+|+||.+.++..+..++.++.. ..++.. ....-.+.|++.+..+|
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~--~~~~~~-~~~~~~l~g~~~s~i~P 249 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAA--LTHGYV-AMWFVLALGLFNSIMFP 249 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH--HcCCHH-HHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999888888777776552 224332 23455688999999999
Q ss_pred hHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHH
Q 016338 92 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFS 145 (391)
Q Consensus 92 ~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~ 145 (391)
...+...+..| ++.+++.++. ....+|..+.|++.|.+.|..|.+..|++..
T Consensus 250 ~~~s~a~~~~~-~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 250 TIFSLALNALG-RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred HHHHHHHhhhh-hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 99999999886 4456666765 5677999999999999999999888887544
No 222
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.05 E-value=9.5e-10 Score=95.87 Aligned_cols=147 Identities=17% Similarity=0.106 Sum_probs=127.0
Q ss_pred hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHH
Q 016338 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALS 310 (391)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (391)
.+-+..+.|++++...+.+.+.+++.|.+.||+| ++..+.+++..+.....++.+.++....++.=.+-+.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iG---------y~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgv 171 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIG---------YKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGV 171 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhc---------cccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhh
Confidence 3445678999999999999999999999999999 5578889999999999999998888877777666666
Q ss_pred hhhhcccchhhhhhhccc--cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccC
Q 016338 311 LSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
...+....-.++..+.+| ++|++++|..-....+|-.++|+++|.++|..| +..+|.+.++++++...+-++..+.
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCc
Confidence 667777777888888888 367999999999999999999999999999999 9999999999998888876665443
No 223
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.04 E-value=1.2e-08 Score=92.70 Aligned_cols=161 Identities=15% Similarity=0.045 Sum_probs=107.9
Q ss_pred HHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC-
Q 016338 218 VLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK- 296 (391)
Q Consensus 218 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 296 (391)
......|.+.++ .|+|.++.+..... .+...+ .++.|.+.||++.|+..+ ||..+..+.+..++........+
T Consensus 6 ~~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Gr---r~~~l~~~~~~~~~~~~~l~~~~~ 79 (356)
T TIGR00901 6 LVGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGR---RRSWLVLTQVLLLSLLLILSFLVP 79 (356)
T ss_pred hHHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCc---cHHHHHHHHHHHHHHHHHHHcCCc
Confidence 345567777777 79999999988644 444444 889999999983210000 34444455555555544444432
Q ss_pred --chhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccc-------hhHH
Q 016338 297 --SPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGS-------FQAF 366 (391)
Q Consensus 297 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~-------~~~~ 366 (391)
+.+......++.........+...++..|..| |+|+.+.|+......+|..+++.+.+.+.+..|. |+..
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH
Confidence 22233333333344445556667777888776 8999999999999999999999999999887663 7888
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 016338 367 LTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~ 384 (391)
|.+.++..++..+..+..
T Consensus 160 f~i~ai~~l~~~~~~~~~ 177 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFL 177 (356)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 888888777766554443
No 224
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.03 E-value=1.4e-08 Score=92.65 Aligned_cols=155 Identities=21% Similarity=0.315 Sum_probs=123.4
Q ss_pred hhHHHHhC-CChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHH----HHHH
Q 016338 6 VPLAAKFG-WSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLL----AVRA 80 (391)
Q Consensus 6 ~~i~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~----~~r~ 80 (391)
+...+|.| .+.+..+.+.++..++-...-...+++..|+|.|+++.++.+.+++=..+.++. +++.+... ....
T Consensus 231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~-~~~~~~~~~~~~l~q~ 309 (400)
T PF03825_consen 231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF-SDPWPFIVALQLLGQL 309 (400)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHh
Confidence 44566777 677788888888888899999999999999999999999999999888887443 24444333 3456
Q ss_pred HHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHh-hhhhhHHHHhhHHHHHHhhcC------chhHHHHHHHHHHHHHH
Q 016338 81 FFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMG-GFHLGNVVGLLLTPIMLSTIG------ISGPFILFSSLGLLWLS 153 (391)
Q Consensus 81 l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~-~~~lg~~~g~~~~~~l~~~~g------wr~~f~~~~~~~~~~~~ 153 (391)
++|+..+..+.....++.+..|++.|+++.++++. ..++|..+|..++|++.|++| |...+.+.+++.++..+
T Consensus 310 lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~ 389 (400)
T PF03825_consen 310 LHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILV 389 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999876 578999999999999999876 44456666666666555
Q ss_pred HHhhcccc
Q 016338 154 TWTSKVTN 161 (391)
Q Consensus 154 ~~~~~~~~ 161 (391)
+.+...+|
T Consensus 390 ~f~~~fk~ 397 (400)
T PF03825_consen 390 LFVILFKP 397 (400)
T ss_pred HHHhhccC
Confidence 55555444
No 225
>PTZ00207 hypothetical protein; Provisional
Probab=99.02 E-value=3.1e-08 Score=93.90 Aligned_cols=159 Identities=11% Similarity=0.017 Sum_probs=103.2
Q ss_pred HHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc
Q 016338 215 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
..+.+..+.|. +++++|+|..+.+.+.... .......++.|++.||+|+ |.++.++.+...++.+....
T Consensus 42 ~~y~fsv~s~~-L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~---------R~vllig~ll~~iG~ll~al 110 (591)
T PTZ00207 42 FMYAFNLISGA-MQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGP---------RPIFVLSMTVFCLGTLLFAL 110 (591)
T ss_pred HHHHHHHHHHH-HHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCc---------HHHHHHHHHHHHHHHHHHHH
Confidence 33455555554 5566999999998887653 3334566788999999994 46666777777777666655
Q ss_pred C------CchhHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHH
Q 016338 295 A------KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLT 368 (391)
Q Consensus 295 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~ 368 (391)
. .+.+.+.+..++.+...+...+.......+.+|++||++.|+......+|+++.+.+...+.+. + +...++
T Consensus 111 a~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-~-~~~~fl 188 (591)
T PTZ00207 111 TFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD-N-TSAYFF 188 (591)
T ss_pred HhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-HHHHHH
Confidence 4 3444444444444444444445555566777899999999999999999998655555444432 2 556666
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 016338 369 VTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~ 386 (391)
+.++..++..++...+.+
T Consensus 189 ~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 189 FLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHhhee
Confidence 666666665555544433
No 226
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.01 E-value=5e-09 Score=98.75 Aligned_cols=146 Identities=13% Similarity=0.099 Sum_probs=109.8
Q ss_pred hhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc--CCchhHHHHHHHH
Q 016338 230 VFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY--AKSPAVAAVLITI 307 (391)
Q Consensus 230 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 307 (391)
++++++.+.|.+.+.+.++..+++++.|++.||+|+| ..+..+.++..+...+... ..+.....+.-++
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r---------~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~ 140 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK---------WSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVI 140 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc---------hhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 4788999999999999999999999999999999964 3444455444444443322 2233444444445
Q ss_pred HHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccc-cchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 308 ALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL-GSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
.+...+...+....+..+..| ++|+++.|+.+....+|..++|.+.+.+.+.. | ++..|.+.++..++..++++...
T Consensus 141 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~ 219 (465)
T TIGR00894 141 QGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFP 219 (465)
T ss_pred HHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHh
Confidence 555556667777778888777 89999999999999999999999999999884 6 88888888887776666555443
No 227
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.2e-09 Score=95.37 Aligned_cols=360 Identities=15% Similarity=0.136 Sum_probs=189.7
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhh----hcCchHHHHH-HHHHHHHHHhhhhhhhccch------
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD----KYGGKKVLAW-GVALWSLSTLLTPWAATHST------ 72 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~~~~-~~~~~~~~~~~~~~a~~~~~------ 72 (391)
.+|+..++.|++....+.+--...+...+.+|+.|..+| ||||||.++. +.+...++.++.+++ .+.
T Consensus 54 y~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~a--aDig~~lgd 131 (498)
T KOG0637|consen 54 YLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYA--ADIGLLLGD 131 (498)
T ss_pred cccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhH--hhhhHHhcC
Confidence 356778888988888888777777888899999999999 5898875554 455566666666555 322
Q ss_pred -----------HHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhh-HHHHHHhhhhhhHHHHhhHHHHHHhhcCchh-
Q 016338 73 -----------ASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERAS-AIGICMGGFHLGNVVGLLLTPIMLSTIGISG- 139 (391)
Q Consensus 73 -----------~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~-~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~- 139 (391)
..++++--+.-+..-.....+.+++.|...++++.+ +.+......++|..+|..++++. +|+-
T Consensus 132 ~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~----~~~~~ 207 (498)
T KOG0637|consen 132 NERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL----GLYKI 207 (498)
T ss_pred CcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc----CceEE
Confidence 233444444455555667788999999987666666 99999999999999999888643 3322
Q ss_pred --------HHHHHHHHHHHHHHHHhhccccC------CCCCCCCChhHHHHHHcCCCcccccCCCccHHHhh-cCCchHH
Q 016338 140 --------PFILFSSLGLLWLSTWTSKVTND------PCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLL-SKLPSWT 204 (391)
Q Consensus 140 --------~f~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 204 (391)
.+.....+....+.-..+..+++ |++++..++.+ +...+..+.....+.. ..+. ..|..|.
T Consensus 208 ~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~-~~~~~~~~~~~~~e~f---G~~~~mpr~m~~ 283 (498)
T KOG0637|consen 208 FPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGT-TARSKSSKLPFLLEIF---GALKVMPRPMRM 283 (498)
T ss_pred eehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcc-cccccccCcchHHHHh---chHhhCChhHHH
Confidence 11111111111111111111111 11111111100 0000000000000001 1111 2356788
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHh-hhCCCcch----------------hhHHhhhHHHHHHHHHHHHHHHHHHHHhhc
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNT-VFNVNLKQ----------------AAWFSAVPWGTMAVSGYMAGKASDSLIKAG 267 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~----------------~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 267 (391)
.++...+.+.+.+.+..|.+.++-+ .++-++.. -.+=+.+..+...+.+....++.||+|.|+
T Consensus 284 L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~ 363 (498)
T KOG0637|consen 284 LLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRK 363 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcce
Confidence 8888888888888888888877644 34433221 112244556667777888888999998553
Q ss_pred cchhHHHHHHHHHHhHhhHHHHHHh-hc------CCc-----hhHHHHHHHHHHHhhhhcccchhhhhh-hccc--cchh
Q 016338 268 YSLTLVRKIMQSIGFIGPGVSLLCL-NY------AKS-----PAVAAVLITIALSLSSFSQAGYLLNIQ-EIAP--DCAG 332 (391)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~ 332 (391)
......+...+..++..+....... .. ... ++......-....-........++..+ +..+ .-+|
T Consensus 364 ~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G 443 (498)
T KOG0637|consen 364 RYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQG 443 (498)
T ss_pred EEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCCC
Confidence 2221111111111111111100000 00 000 000000000000000111111222221 1122 2347
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHH
Q 016338 333 FLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGL 373 (391)
Q Consensus 333 ~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~ 373 (391)
...|+.|..-.+.+++.....|.+.|..|+-...-...+..
T Consensus 444 ~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~ 484 (498)
T KOG0637|consen 444 LDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAV 484 (498)
T ss_pred ceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHH
Confidence 78888888889999999999999999887544443333333
No 228
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.00 E-value=1.9e-08 Score=105.52 Aligned_cols=156 Identities=12% Similarity=0.005 Sum_probs=110.6
Q ss_pred HhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcc--hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 016338 195 HLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLK--QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTL 272 (391)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~ 272 (391)
+.++++.++...+..++..+........+..++.+.++.+.. ..++..++..++..++.++.|+++||+|||
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk------ 77 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN------ 77 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH------
Confidence 456777888888777777776666665565566554555433 357778888889999999999999999964
Q ss_pred HHHHHHHHHhHhhHHHH---HHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHH
Q 016338 273 VRKIMQSIGFIGPGVSL---LCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAII 348 (391)
Q Consensus 273 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i 348 (391)
.++..+..+..+.. ......++.+.+.+..++.+...+...+....++.+..| ++|++++|+.+....+|..+
T Consensus 78 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~l 154 (1146)
T PRK08633 78 ---RVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILA 154 (1146)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHH
Confidence 33333333222222 122223344555555555556666777777888888877 89999999999999999999
Q ss_pred HHHHhhHhhcc
Q 016338 349 STIGTGYFVQW 359 (391)
Q Consensus 349 ~~~~~g~l~~~ 359 (391)
+|.+++.+.+.
T Consensus 155 g~~l~~~l~~~ 165 (1146)
T PRK08633 155 GTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHh
Confidence 99999999876
No 229
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.00 E-value=1.8e-08 Score=89.16 Aligned_cols=148 Identities=38% Similarity=0.596 Sum_probs=119.7
Q ss_pred chhhHHHHhCCCh--hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 4 AVVPLAAKFGWSS--SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 4 ~~~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
..+.+.++++.+. .+.++..+.+.++..++.++.|.+.||+|||+.+..+......+.+..++...++.+.+++.|+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLL 103 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 4566677777666 58999999999999999999999999999998888888765565555543311248999999999
Q ss_pred HHhhhhchhhhHHHHhhhhcCc-cchhhHHHHHHh-hhhhhHHHHhhHHHHHHhh--cCchhHHHHHHHHHHHH
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPS-HERASAIGICMG-GFHLGNVVGLLLTPIMLST--IGISGPFILFSSLGLLW 151 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~-~~rg~~~~~~~~-~~~lg~~~g~~~~~~l~~~--~gwr~~f~~~~~~~~~~ 151 (391)
+|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... .+||..|..........
T Consensus 104 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 104 QGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 9999999999999999999987 689999999888 6888999999877776654 67999777666555443
No 230
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.98 E-value=7.4e-09 Score=97.13 Aligned_cols=127 Identities=17% Similarity=0.185 Sum_probs=111.2
Q ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhh--------ccchHHHHHHHHH
Q 016338 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA--------THSTASLLAVRAF 81 (391)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~--------~~~~~~~~~~r~l 81 (391)
+++|.|+++.|.+.+...++..++....+++.+|++.|+++.++.++.+++.....+.. .++.+......++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 46899999999999999999999999999999999999999999999998886542111 1344455667788
Q ss_pred HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC
Q 016338 82 FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG 136 (391)
Q Consensus 82 ~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g 136 (391)
.+++.+........++.+..|+++++...++.++..++|..+++.+++.+.+..|
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999889999999999999999999999999999999999999999988776
No 231
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.97 E-value=4.4e-08 Score=81.00 Aligned_cols=346 Identities=12% Similarity=0.101 Sum_probs=184.4
Q ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhh
Q 016338 8 LAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEG 87 (391)
Q Consensus 8 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~ 87 (391)
+-+.++....|+|.+.-..+-..++...+.|.++||-|||+.-+.-++.+.++++-- .++.+-.++++|.+-|+..+
T Consensus 63 LYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK---hSpqYkVLmVGR~LGGiaTs 139 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK---HSPQYKVLMVGRVLGGIATS 139 (454)
T ss_pred eehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh---cCCceEEEeehhhhhhHHHH
Confidence 345677778899988888888888999999999999999997776666666665532 46899999999999999998
Q ss_pred chhhhHHHH-hhhhcCccchhhHHHHHH--------hhhhhhHHHHhhHHHHHHhhcC--chhHHHHHHHHHHHHHHHHh
Q 016338 88 VAMPAMSTL-TSRWFPSHERASAIGICM--------GGFHLGNVVGLLLTPIMLSTIG--ISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 88 ~~~~~~~~~-i~~~~~~~~rg~~~~~~~--------~~~~lg~~~g~~~~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~ 156 (391)
..+..--+. ++|.- ++|+.---+.. .+.++-.+++.+.+..+.++++ --.+|-..+....+...+..
T Consensus 140 LLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil 217 (454)
T KOG4332|consen 140 LLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL 217 (454)
T ss_pred HHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 877776665 45554 33432222211 2334444555566666666554 44456655544444333322
Q ss_pred hccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHH-HHHhhHHHHHhhhCCCc
Q 016338 157 SKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFV-LLSWMPIYFNTVFNVNL 235 (391)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~ 235 (391)
.-..|.-.+. .++++...+ .+...+.+..|+++.++--+..+.-...+. ..-|.|..--+..+
T Consensus 218 ~~W~ENygdp----s~~kdlltq---------f~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~--- 281 (454)
T KOG4332|consen 218 SSWSENYGDP----SENKDLLTQ---------FKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE--- 281 (454)
T ss_pred hhhhhccCCh----hhhHHHHHH---------hhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---
Confidence 2222222111 111111111 112334555666665544433333333222 22344433222112
Q ss_pred chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc---CCchhHHHHHHHHHHHhh
Q 016338 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY---AKSPAVAAVLITIALSLS 312 (391)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 312 (391)
.--|.+++.+..+.++|+-+..++..|-..| ..........+......+....... ..++....+.++..-...
T Consensus 282 iPhGfiFatFMlASmLGSSla~Rl~s~s~~~---ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cv 358 (454)
T KOG4332|consen 282 IPHGFIFATFMLASMLGSSLASRLLSRSSPK---VESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACV 358 (454)
T ss_pred CCchhHHHHHHHHHHHhhHHHHHHHhcCCcc---cchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHH
Confidence 2346777777777777776666665553322 1111111111111111111111111 123344455566666667
Q ss_pred hhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcc--ccchhHHHHHHHHHHHHHHHH
Q 016338 313 SFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW--LGSFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~--~g~~~~~~~~~~~~~~~~~~~ 380 (391)
+.++|...-+-++..| +.|++.+-+...--++-..++-.. .=.|. .+ -+..|-++.....++.+.
T Consensus 359 GlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLyn--lh~~~~p~~-tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 359 GLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFPTT-TRNMFGICSAFLFVASIL 426 (454)
T ss_pred hhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee--cccccCccc-cchhhhhhHHHHHHHHHH
Confidence 7788888888788888 678766555443333332222111 00111 12 345666666666666444
No 232
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.97 E-value=7e-08 Score=91.06 Aligned_cols=174 Identities=16% Similarity=0.082 Sum_probs=116.1
Q ss_pred cCCchHHHHHHHHHH----HHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 016338 198 SKLPSWTVIIANITN----NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLV 273 (391)
Q Consensus 198 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~ 273 (391)
++|+++.......+. ++........++...++ .|-+ .+..++.....++..+..++.|+++|.+|
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfG--------- 106 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFG--------- 106 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhc---------
Confidence 445555443333332 22333333445544444 6655 55667777888899999999999999999
Q ss_pred HHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHH
Q 016338 274 RKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIG 352 (391)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~ 352 (391)
||...+.+.++..++.++....++.........+.+...+... ......+|..| +.|..+.++.....-....++|.+
T Consensus 107 Rr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~i 185 (599)
T PF06609_consen 107 RRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLI 185 (599)
T ss_pred chHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHH
Confidence 5688888999999999988888877766665555444333332 34445778778 788877776665554555567777
Q ss_pred hhHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 353 TGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 353 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
...+..+.+ |++.|++..+...++.+...++
T Consensus 186 a~~~~~~~~-WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 186 AQLFAAHSG-WRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHhccCCC-cchHHHHHHHHHHHHHHHHHHH
Confidence 766655544 9999999888877776654443
No 233
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.96 E-value=5e-09 Score=101.54 Aligned_cols=160 Identities=12% Similarity=0.042 Sum_probs=108.2
Q ss_pred HHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC
Q 016338 217 FVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK 296 (391)
Q Consensus 217 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (391)
.++....-+-++++++++..+.|++.+...++..++.++.+++.||.+||+ .+.++.++.+++.++....+
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~---------~i~~g~ll~~lg~ll~alph 119 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI---------VIGIGCAIMGLGSFLLSLPH 119 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce---------EEEecHHHHHHHHHHHhChH
Confidence 333333333455569999999999999999999999999999999999653 33344444444444332210
Q ss_pred -------------------------------------------------c--hhHHHHHHHHHHHhhhhcccchhhhhhh
Q 016338 297 -------------------------------------------------S--PAVAAVLITIALSLSSFSQAGYLLNIQE 325 (391)
Q Consensus 297 -------------------------------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (391)
+ ...+++.-++.+...+...+....++.|
T Consensus 120 f~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d 199 (633)
T TIGR00805 120 FLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDD 199 (633)
T ss_pred HhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhc
Confidence 0 1122233334444444555666778888
Q ss_pred ccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccc---------------------cchhHHHHHHHHHHHHHHHHHHH
Q 016338 326 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL---------------------GSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 326 ~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~---------------------g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
..| ++|+...|+.+....+|..+++.+.+.+.+.. |.|+..|++.+++.++..+.++.
T Consensus 200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777 89999999999999999999999999987643 22455677777666665555554
Q ss_pred hc
Q 016338 384 YS 385 (391)
Q Consensus 384 ~~ 385 (391)
+.
T Consensus 280 ~p 281 (633)
T TIGR00805 280 FP 281 (633)
T ss_pred Cc
Confidence 44
No 234
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.93 E-value=4.3e-08 Score=84.92 Aligned_cols=154 Identities=18% Similarity=0.140 Sum_probs=125.8
Q ss_pred hhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc-CchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHH
Q 016338 5 VVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFG 83 (391)
Q Consensus 5 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G 83 (391)
+|.+..|.|+|..+.|++.+...+.+...++....+++|. ++|+..+....++.++.+.+.++ +....+.. -++.|
T Consensus 231 LP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~--P~~~~~lw-~~llG 307 (395)
T COG2807 231 LPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA--PGQLPILW-ALLLG 307 (395)
T ss_pred HHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh--hhhHHHHH-HHHHh
Confidence 6899999999999999999999999999999999999976 66777788888888888777555 33322222 49999
Q ss_pred hhhhchhhhHHHHhhhhcCc-cchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc-CchhHHHHHHHHHHHHHHHHhhcccc
Q 016338 84 LAEGVAMPAMSTLTSRWFPS-HERASAIGICMGGFHLGNVVGLLLTPIMLSTI-GISGPFILFSSLGLLWLSTWTSKVTN 161 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~~~ 161 (391)
+|.|..++.+...+.+..++ ++-++-.++.+....+=..+||.+.|++.|.. +|+.+....+...+.+.+..+..-|+
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~ 387 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRN 387 (395)
T ss_pred CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchh
Confidence 99999999999999987753 44567777888888888899999999999876 59999999888888877776655433
No 235
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.90 E-value=8.4e-08 Score=82.24 Aligned_cols=364 Identities=13% Similarity=0.074 Sum_probs=224.0
Q ss_pred HhCCChhhHH-HHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhch
Q 016338 11 KFGWSSSFLG-IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVA 89 (391)
Q Consensus 11 ~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~ 89 (391)
+.|++..|+. -+.-...=.+.+.-.+.=.+.|..-.|++++.-.+.......+. .+.++.+.+=+..+..|...+.
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~l--v~g~sV~~mQvlE~FyG~~tAa- 111 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIML--VFGPSVKAMQVLEFFYGPATAA- 111 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHH--HhcCCchheeeehhhcChHHHH-
Confidence 3455555443 22223333455555666678999888998888777777777776 4458888888888888887654
Q ss_pred hhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCch--hHHHHHHHHHHHHHHHHhhccccCCCCCC
Q 016338 90 MPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGIS--GPFILFSSLGLLWLSTWTSKVTNDPCNSP 167 (391)
Q Consensus 90 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (391)
..+.++++-+..|++++.++.+...+..-.|-..|..++..+.+.-.+. ..=.+ .............++|..+++.-
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~I-SL~~~~ia~~~A~fLP~v~rSl~ 190 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYI-SLAEVTIAVLLALFLPRVKRSLY 190 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchh-hHHHHHHHHHHHhhCCCCchhhh
Confidence 4778899999999999999999999999999999998888876643322 21111 22222222333334454443211
Q ss_pred CCChhHHHHHHcCCCcccccC-----------CCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCc-
Q 016338 168 FVSKSELRLIQAGKSDSVKKR-----------NPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNL- 235 (391)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 235 (391)
.+.++++....+.++...+.+ -..++.+..+||+.....+-+.+...+++-..+|.-..-++...-+.
T Consensus 191 f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~ 270 (433)
T KOG3810|consen 191 FHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPAN 270 (433)
T ss_pred hhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchh
Confidence 111111111111111001111 12345667788999888888888888888888887776666421111
Q ss_pred chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhc
Q 016338 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFS 315 (391)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (391)
.-.|..=++....++++.+..|.+.-++.|. +..++..+....+-.++.+..+++.|...+..++........
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~ 343 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLT 343 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhh
Confidence 1123344455566777888888887666655 567777777777777777777777777666655554443333
Q ss_pred -ccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhcccc----------chhHHHHHHHHHHHHHHHHHHHh
Q 016338 316 -QAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLG----------SFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 316 -~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g----------~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
+........+...|.-|...|+...+.-+-..+-.. .+.|..| -|..-|.+.+++.+++.......
T Consensus 344 itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~---iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 344 ITIATFQIARNLSSELFGLVFGINTFVALILQSILTL---IVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred hhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheE---EEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 333444455566678888888877666554444333 3344322 25566888888888886655544
Q ss_pred ccCc
Q 016338 385 STGE 388 (391)
Q Consensus 385 ~~~~ 388 (391)
.++.
T Consensus 421 ~~~~ 424 (433)
T KOG3810|consen 421 CRRN 424 (433)
T ss_pred hhcC
Confidence 4433
No 236
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.6e-08 Score=83.07 Aligned_cols=143 Identities=19% Similarity=0.147 Sum_probs=110.2
Q ss_pred hHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHH-HHHHHHhhhhhhhccchHHHHHHHHHHHhh
Q 016338 7 PLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVA-LWSLSTLLTPWAATHSTASLLAVRAFFGLA 85 (391)
Q Consensus 7 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g 85 (391)
..++++|+|+...+-+.+.-..-.++.+++.|.++||+|++...+.+.. ....+.... . -+++.=..+..+.|+.
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l--~--Ft~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGL--F--FTFLSPYTSMTFLGLS 365 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhH--H--hhhccHHHHHHHHhhh
Confidence 4688999999999999998888889999999999999999976665544 444444444 2 2333445677788888
Q ss_pred hhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC---chhHHHH-HHHHHHHHHH
Q 016338 86 EGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG---ISGPFIL-FSSLGLLWLS 153 (391)
Q Consensus 86 ~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g---wr~~f~~-~~~~~~~~~~ 153 (391)
.+.........++...|+++.|.+.|..++..++|..+-|++.+.+.+.-| |--.|.+ .+.+++....
T Consensus 366 ysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svg 437 (459)
T KOG4686|consen 366 YSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVG 437 (459)
T ss_pred HHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHH
Confidence 887766678889999999999999999999999999999999999988644 4444444 4444444333
No 237
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.87 E-value=1.9e-08 Score=87.37 Aligned_cols=132 Identities=18% Similarity=0.101 Sum_probs=100.3
Q ss_pred CCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhh
Q 016338 233 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 312 (391)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (391)
.+..-+|++.+.+.+...+.++..|.++||+| ||.++.++.+...+...+....++. ..++..=+..+..
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yG---------Rkpvll~c~~~va~s~ll~~~S~~F-~afv~aR~l~Gi~ 134 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYG---------RKPVLLACLIGVALSYLLWALSRNF-AAFVLARFLGGIF 134 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhC---------chHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhc
Confidence 35567889999999999999999999999999 6688888888888877777766555 3333322223333
Q ss_pred hhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc---cccchhHHHHHHHHHH
Q 016338 313 SFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ---WLGSFQAFLTVTAGLY 374 (391)
Q Consensus 313 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~---~~g~~~~~~~~~~~~~ 374 (391)
........+++.|+.+ |+|+.+++.+++..++|..+||.++|++.+ ..|++..++....++.
T Consensus 135 kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i 200 (451)
T KOG2615|consen 135 KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFI 200 (451)
T ss_pred cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHH
Confidence 3344556778888877 899999999999999999999999999987 5676666653333333
No 238
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.83 E-value=1.6e-08 Score=91.71 Aligned_cols=146 Identities=21% Similarity=0.261 Sum_probs=128.7
Q ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhc
Q 016338 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (391)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~ 88 (391)
.||.+..+...|........+-.+.=++.+++.+|+|+-+++.+++.+..+=.+..++. +|.|+.+-..+++|+..+.
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L--~n~W~vLPieilqgit~al 475 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL--QNPWMVLPIEILQGITHAL 475 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh--cCchheeeHHHHHHHHHHH
Confidence 35666667777877788888888889999999999999999999999999988888666 9999999999999999999
Q ss_pred hhhhHHHHhhhhcCccchhhHHHHHH-hhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 89 AMPAMSTLTSRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 89 ~~~~~~~~i~~~~~~~~rg~~~~~~~-~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
.+.+..++++...||+-|..+-++.+ ...++|--+|.++||.+.+.+|=|..|...++.+++..++..
T Consensus 476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998876 567899999999999999999999999998887776555443
No 239
>PRK09669 putative symporter YagG; Provisional
Probab=98.82 E-value=6.6e-08 Score=90.52 Aligned_cols=173 Identities=14% Similarity=0.036 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhh
Q 016338 206 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 285 (391)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
.+.-+...........+++.|+.+.+|+|+..+|.+..+.-+...+..++.|+++||.+.|.-+ ||..+..+.+..
T Consensus 15 g~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Gr----rrp~il~~~~~~ 90 (444)
T PRK09669 15 GLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQ----FRPYLLWFAIPF 90 (444)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCC----cchhHHHHHHHH
Confidence 3444455556677788999999999999999999999999999999999999999995432000 344454554444
Q ss_pred HHHHHHhhcCCc------hhHHHHHHHHHHHhhhhcccchhhhhhhccc--cchhHHHHHHHHHHHHHHHHHHHHhhHhh
Q 016338 286 GVSLLCLNYAKS------PAVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTGYFV 357 (391)
Q Consensus 286 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 357 (391)
++...+....++ ..+..+..++.............+...|..+ ++|.+..+.......+|+.+++.+...+.
T Consensus 91 ~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~ 170 (444)
T PRK09669 91 GVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLV 170 (444)
T ss_pred HHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444433322221 1222222222233334455556677777654 78999889888888888888887666555
Q ss_pred cccc------chhHHHHHHHHHHHHHHHHHH
Q 016338 358 QWLG------SFQAFLTVTAGLYFVTTIFWN 382 (391)
Q Consensus 358 ~~~g------~~~~~~~~~~~~~~~~~~~~~ 382 (391)
+..+ +|...+.+.+++..+..+...
T Consensus 171 ~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~ 201 (444)
T PRK09669 171 DILGKGDEQKGYFYAMMVMGLLGVVLFFCCF 201 (444)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHHh
Confidence 4332 144455555555544444333
No 240
>PRK11462 putative transporter; Provisional
Probab=98.81 E-value=2.1e-07 Score=87.24 Aligned_cols=174 Identities=16% Similarity=0.103 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHhH
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA-GYSLTLVRKIMQSIGFI 283 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~-~~~~~~~~~~~~~~~~~ 283 (391)
..+.-+..+..+.....|+..|+.+..|+++..+|.+..+.-+..++.-++.|+++||...| +. ||..+..+.+
T Consensus 14 Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr-----~rp~il~g~i 88 (460)
T PRK11462 14 YGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGK-----FRPWVLFGAL 88 (460)
T ss_pred hccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCC-----cchhHhHHHH
Confidence 33444455666777788999999999999999999999999999999999999999986433 11 4455555655
Q ss_pred hhHHHHHHhhcCCc------hhHHHHHHHHHHHhhhhcccchhhhhhhccc--cchhHHHHHHHHHHHHHHHHHHHHhhH
Q 016338 284 GPGVSLLCLNYAKS------PAVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTGY 355 (391)
Q Consensus 284 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~~~~~g~ 355 (391)
..++...++...++ ..+..+..++......+......+...|..+ ++|++..+.-.....+|..+++.+...
T Consensus 89 ~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~p 168 (460)
T PRK11462 89 PFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMP 168 (460)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555554443321 1222333333444555666677778888666 799999999999999998888887766
Q ss_pred hhcccc------chhHHHHHHHHHHHHHHHHHHH
Q 016338 356 FVQWLG------SFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 356 l~~~~g------~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
+.+..| +|.....+.+++.+++..+...
T Consensus 169 lv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 169 LVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 655443 1444444455544444444333
No 241
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.78 E-value=1.9e-07 Score=88.16 Aligned_cols=170 Identities=16% Similarity=0.127 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHH----HhhccchhHHHHHHHHH
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSL----IKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~----~~~~~~~~~~~~~~~~~ 280 (391)
..+.-+..+........|++.|+.+..|+++..+|.+..+.-+..++..++.|+++||. ||| |..+..
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grr--------rp~il~ 82 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKF--------KPWILI 82 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCc--------chhHhh
Confidence 44555566777788889999999999999999999999999999999999999999965 653 455555
Q ss_pred HhHhhHHHHHHhhcCCc---h---hHHHHHHHHHHHhhhhcccchhhhhhhccc--cchhHHHHHHHHHHHHHHHHHHHH
Q 016338 281 GFIGPGVSLLCLNYAKS---P---AVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIG 352 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~~~~ 352 (391)
+.+..++...++...++ . .+..+..++.............+...|..+ ++|.+..+......++|+.+.+.+
T Consensus 83 g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 83 GTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred hhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666544433221 1 122222233334445556667777788663 789999998777778877777666
Q ss_pred hhHhhcccc------chhHHHHHHHHHHHHHHHHHH
Q 016338 353 TGYFVQWLG------SFQAFLTVTAGLYFVTTIFWN 382 (391)
Q Consensus 353 ~g~l~~~~g------~~~~~~~~~~~~~~~~~~~~~ 382 (391)
...+.+..| .+.....+.+++.+++.+...
T Consensus 163 ~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~ 198 (473)
T PRK10429 163 TLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITL 198 (473)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 554433222 134444444444444444333
No 242
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.76 E-value=1.3e-06 Score=77.04 Aligned_cols=165 Identities=18% Similarity=0.073 Sum_probs=123.0
Q ss_pred HHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHH
Q 016338 212 NNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLC 291 (391)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
.+......+.-+.+.+++.++.+..+++++......+.....+..+++.+|++ +|.-+..++.+++++..+
T Consensus 24 l~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~g---------yk~gi~lgL~l~avg~~l 94 (422)
T COG0738 24 LWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLG---------YKAGIVLGLLLYAVGAAL 94 (422)
T ss_pred HHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhh---------hHHHHHHHHHHHHHHHHH
Confidence 33333444455556777779999999999999999999999999999999999 556677888888888887
Q ss_pred hhcC---CchhHHHHHHHHHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcc--------
Q 016338 292 LNYA---KSPAVAAVLITIALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW-------- 359 (391)
Q Consensus 292 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~-------- 359 (391)
+... .+........++.....+........++....| +....-+.+.+.+..+|+.++|.+.+.+.++
T Consensus 95 F~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~ 174 (422)
T COG0738 95 FWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSA 174 (422)
T ss_pred HhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCH
Confidence 7533 344444444455555556666677777777777 6778889999999999999999999998873
Q ss_pred ----------ccchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 360 ----------LGSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 360 ----------~g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
.+..+.++...+...++..+.....+
T Consensus 175 ~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 175 AQILAIKGADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 23466677777777666666655554
No 243
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.74 E-value=3.6e-06 Score=73.37 Aligned_cols=338 Identities=12% Similarity=0.034 Sum_probs=188.2
Q ss_pred chhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhh-----hcCchHHHHH-HHHHHHHHHhhhhhh---------h
Q 016338 4 AVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD-----KYGGKKVLAW-GVALWSLSTLLTPWA---------A 68 (391)
Q Consensus 4 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~-~~~~~~~~~~~~~~a---------~ 68 (391)
.+|.+.+.=|.|.++.+...-.+. . ..--+.+.++.| |+||||.-++ +..+.+....+.+.- -
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~ay~-P-~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSFAYW-P-FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhhhhh-H-HHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence 467777777788777765443332 1 234678999999 9999974332 222222222222111 1
Q ss_pred ccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh-------hcCch---
Q 016338 69 THSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS-------TIGIS--- 138 (391)
Q Consensus 69 ~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~-------~~gwr--- 138 (391)
.++...+...-++.-+..+....+.-...-.+..+++.|-+......+.+.|.+++..+.-.+.+ ..+|.
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~ 209 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQ 209 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCcc
Confidence 23444444455666677777777777777778888888888888777778777777654322221 01222
Q ss_pred ------hHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHH
Q 016338 139 ------GPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITN 212 (391)
Q Consensus 139 ------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (391)
.-.+..+.+..+...+..+..+|.+++.. +++.. ..++..+-++++++-|.....+......
T Consensus 210 g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~---~e~~~---------~i~~~yk~l~~vLklk~v~~la~i~lt~ 277 (510)
T KOG3574|consen 210 GFITLAGYLWFWGALFIVATTLVALLKKENDESVD---EELEL---------GIHESYKLLRDVLKLKSVRWLAGILLTG 277 (510)
T ss_pred ceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhh---hhhhc---------CHHHHHHHHHHHHcCccHHHHHHHHHHH
Confidence 12333344444444444444444333211 11110 1111223567888889998888888888
Q ss_pred HHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHhHhhHHHHHH
Q 016338 213 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA-GYSLTLVRKIMQSIGFIGPGVSLLC 291 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
-.++.+-....+.-+.| .|.+.++.+++..+ ....++..++...|+-.+ ++..+..|....-+........+..
T Consensus 278 K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~----~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~ 352 (510)
T KOG3574|consen 278 KLGFQAADALTSLKLLE-HGVPKEELALIAVP----LVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVW 352 (510)
T ss_pred HHHhhhhhhccchHHHH-cCCChhHheeeeee----hhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHh
Confidence 88999988899988888 79999887776533 445555555555555432 1111222222211222111111111
Q ss_pred -hh-cCC----chhHHHHHHH----HHHHhhhhcccchhhhhhhc-cccchhHHHHHHHHHHHHHHHHHHHHhhHhhccc
Q 016338 292 -LN-YAK----SPAVAAVLIT----IALSLSSFSQAGYLLNIQEI-APDCAGFLHGIANSAGTLAAIISTIGTGYFVQWL 360 (391)
Q Consensus 292 -~~-~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~ 360 (391)
.. ... -+....++.+ +...+....+...++..+++ .|...|+.+.+.|+..++|+--=..+..++.|..
T Consensus 353 ~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 353 WTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred hhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 11 111 0111122222 22222222223333344444 4578999999999999999988888888888864
No 244
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.71 E-value=5.1e-08 Score=84.42 Aligned_cols=131 Identities=21% Similarity=0.303 Sum_probs=98.8
Q ss_pred HHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchH--HHHHHHHHHHhhhhchhhhHHHHhhhhcCcc
Q 016338 27 LWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTA--SLLAVRAFFGLAEGVAMPAMSTLTSRWFPSH 104 (391)
Q Consensus 27 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~ 104 (391)
++.-.-|.++.+.+.||+|||+++....+++++..++.-....+|.. ++..+|++. ++.+.+.+.|..|.+|.+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafi----sg~fqvaYvYtPEVyPTa 466 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFI----SGAFQVAYVYTPEVYPTA 466 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHH----hchheEEEEecCcccchh
Confidence 44556788999999999999999999999999999887444444433 234456554 344567789999999999
Q ss_pred chhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhccccCC
Q 016338 105 ERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (391)
Q Consensus 105 ~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (391)
-|+...|..+.+..+|.++.|.++ +....+-..+..+.+...++..+...+++-|+.
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 999999999999999999999998 333344455666667777766666665554543
No 245
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.69 E-value=7.8e-08 Score=65.50 Aligned_cols=73 Identities=23% Similarity=0.219 Sum_probs=66.1
Q ss_pred CccchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHH
Q 016338 1 MSVAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASL 75 (391)
Q Consensus 1 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 75 (391)
++|.+|.+++|.++|.++.|++.+.+.+||.+|++...++.++..+|+.+..+.+...+..+.+++. ++++.+
T Consensus 11 yTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~--~~~~~w 83 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT--HSFWLW 83 (85)
T ss_pred HHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH--hchHHH
Confidence 3689999999999999999999999999999999999999999888999999999999999999544 666544
No 246
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.68 E-value=1.1e-07 Score=88.69 Aligned_cols=171 Identities=19% Similarity=0.172 Sum_probs=124.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHH----HHHhhccchhHHHHHHHHHHhHh
Q 016338 209 NITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASD----SLIKAGYSLTLVRKIMQSIGFIG 284 (391)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~~~~~~~~~~~~~~~~~~~~~~ 284 (391)
.+...........+++.|+.+..|.++...+.+.....+..++..++.|.++| |+|| ||..+..+...
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Gr--------rrp~~l~g~i~ 81 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGR--------RRPWILIGAIL 81 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccc--------cceEeehhhHH
Confidence 34555666667789999999999999999999999999999999999999999 5665 44555667667
Q ss_pred hHHHHHHhhcC-C---ch----hHHHHHHHHHHHhhhhcccchhhhhhhccc--cchhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 285 PGVSLLCLNYA-K---SP----AVAAVLITIALSLSSFSQAGYLLNIQEIAP--DCAGFLHGIANSAGTLAAIISTIGTG 354 (391)
Q Consensus 285 ~~~~~~~~~~~-~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~i~~~~~g 354 (391)
.++...++... + +. .+..+..++.............+...|..+ ++|.+..+..+....+|..+...+.+
T Consensus 82 ~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~ 161 (428)
T PF13347_consen 82 LALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP 161 (428)
T ss_pred HHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 77666666544 2 11 122333333344455566667778888776 68999999999999999888888888
Q ss_pred Hhhcccc------chhHHHHHHHHHHHHHHHHHHHhccC
Q 016338 355 YFVQWLG------SFQAFLTVTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 355 ~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
.+.+..| +|.....+.+++..++.+......|+
T Consensus 162 ~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 162 ILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred hhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 7776554 36667777777777766666655555
No 247
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.65 E-value=8.1e-07 Score=81.10 Aligned_cols=125 Identities=18% Similarity=0.197 Sum_probs=104.8
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhh
Q 016338 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPA 92 (391)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~ 92 (391)
|.++.+..+.......+..++.+++.++.+|+|+|+++.++.++..++.++.-+...++.+..++..++.++|.+...+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l 347 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPL 347 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccc
Confidence 44556677788888888888899999999999999999999999999999886655568889999999999999999999
Q ss_pred HHHHhhhhcCc-------cchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCc
Q 016338 93 MSTLTSRWFPS-------HERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI 137 (391)
Q Consensus 93 ~~~~i~~~~~~-------~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gw 137 (391)
..++++|..+- ++-|...+......=+|..++..+.++..+..|+
T Consensus 348 ~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 348 PWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred cHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999887652 3347778888888889999999888888776653
No 248
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=5e-07 Score=83.87 Aligned_cols=150 Identities=13% Similarity=0.077 Sum_probs=118.7
Q ss_pred hhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC--chhHHHHHHH
Q 016338 229 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK--SPAVAAVLIT 306 (391)
Q Consensus 229 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 306 (391)
+++++++++-+++.+....+.+++.+..|++.||+|.| .++..+.++.++..++.+... +.+..+++=+
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r---------~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~ 136 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR---------RVFFISGLISALLTLLTPLAASIGFYLLLVLRF 136 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch---------HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHH
Confidence 35788899999999999999999999999999999954 555566666666666655433 2233444445
Q ss_pred HHHHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcc-ccchhHHHHHHHHHHHHHHHHHHHh
Q 016338 307 IALSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW-LGSFQAFLTVTAGLYFVTTIFWNLY 384 (391)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
+.+...+...+.......+=.| ++|++..++.....++|.+++-++.|.+.+. .| |+..|++.+.+.++..+++..+
T Consensus 137 lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 137 LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHH
Confidence 5555566677777777777555 9999999999999999999999999999998 77 9999999999999888888776
Q ss_pred ccCc
Q 016338 385 STGE 388 (391)
Q Consensus 385 ~~~~ 388 (391)
.+++
T Consensus 216 ~~d~ 219 (466)
T KOG2532|consen 216 YSDS 219 (466)
T ss_pred hcCC
Confidence 5543
No 249
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.56 E-value=0.0004 Score=64.86 Aligned_cols=247 Identities=9% Similarity=-0.004 Sum_probs=143.9
Q ss_pred ChhhHHHHHHHHHH-HHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhh-------ccc---------------
Q 016338 15 SSSFLGIVQSSFLW-GYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAA-------THS--------------- 71 (391)
Q Consensus 15 s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~-------~~~--------------- 71 (391)
+++.+..+-....+ ...+......+++||++|++++-+....+.....+.++.. .++
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 44556666665555 4456678899999999999988877776666666654431 111
Q ss_pred -------hHHHHHHHHHHHhhhhchhh-hHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh---------h
Q 016338 72 -------TASLLAVRAFFGLAEGVAMP-AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS---------T 134 (391)
Q Consensus 72 -------~~~~~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~---------~ 134 (391)
.|.+.+.-+..-+-...... .-..+.+|.++.+|-.|..++...+.++|.+++..+...+.+ .
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~ 215 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGV 215 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 12333333333333333333 347788999999999999999999999999999998888877 1
Q ss_pred cCchhHHHHH----HHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHH
Q 016338 135 IGISGPFILF----SSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANI 210 (391)
Q Consensus 135 ~gwr~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (391)
-.|...+... .+.+.+.... .....+...+++... +...++++.+++.....+.+.++|+|.+..+++...
T Consensus 216 ~~~~~~l~~l~~~v~~~g~~i~~~-~~~~~~~vl~~~~~~----~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi 290 (491)
T PF03219_consen 216 DAWELSLNSLMGIVLILGIVIILL-YRYMNKNVLTDPRFY----PSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVI 290 (491)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHccCccccc----hhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHH
Confidence 2354333221 1122222222 222222211111100 000111111122223346677888998888888888
Q ss_pred HHHHHHHHHHHhhHHHHHhhhCCCcchh---hHHhhhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 211 TNNWGYFVLLSWMPIYFNTVFNVNLKQA---AWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (391)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 266 (391)
++......+....-..+++.+.-+.+-. |......++...+..++++.+.+|+|-+
T Consensus 291 ~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 291 AYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 8777777776665566666443222222 3344555666666667888888888743
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.55 E-value=2.2e-06 Score=66.69 Aligned_cols=108 Identities=15% Similarity=0.188 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHhhhh
Q 016338 21 IVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRW 100 (391)
Q Consensus 21 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~ 100 (391)
.-.++......+++++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++.+-.+.|++.+..+...-.++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~---~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF---FYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 34455666677888889999999999999999999988665544 237889999999999999999999999999999
Q ss_pred cCccchhhHHHHHHhhhhhhHHHHhhHHHHH
Q 016338 101 FPSHERASAIGICMGGFHLGNVVGLLLTPIM 131 (391)
Q Consensus 101 ~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l 131 (391)
.++++|++..++.......+.++|.++.-.+
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888776554
No 251
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.53 E-value=6e-06 Score=78.80 Aligned_cols=136 Identities=15% Similarity=0.042 Sum_probs=108.6
Q ss_pred hhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcc
Q 016338 237 QAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQ 316 (391)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (391)
+.+++.+...++..++.++.|+++|++| ||..+.++.+...++.++....++.....+.=++.+...+...
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~G---------Rk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~ 160 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIG---------RKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGAS 160 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh---------hHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhh
Confidence 3478999999999999999999999999 5577778888888888888888888777777666666666677
Q ss_pred cchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccc--cchhHHHHHHHHHHHHHHHHHHH
Q 016338 317 AGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL--GSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 317 ~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
.....+..|..| +.||...+..+....+|..++ .+.+...++. + |+..+.+..+..++-.+...+
T Consensus 161 ~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~-Wr~~~~~~~i~~~~~~~~~~~ 228 (513)
T KOG0254|consen 161 VLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAG-WRIPLGLALIPAVILALGMLF 228 (513)
T ss_pred hcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCcc-HHHHHHHHHHHHHHHHHHHHh
Confidence 778888999988 799999999999998887777 6666655543 4 887777777777777666333
No 252
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.50 E-value=5.5e-06 Score=69.92 Aligned_cols=160 Identities=16% Similarity=0.031 Sum_probs=101.6
Q ss_pred HHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc
Q 016338 215 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
..+.+..|-|. +++.+|+|.++...+.....++..+ .++.|.+.||.|. +..+.++.+....+...+..
T Consensus 17 t~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp---------~~~l~iG~~~~~~GY~~~~l 85 (250)
T PF06813_consen 17 TTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGP---------WVVLLIGAVLGFVGYGLLWL 85 (250)
T ss_pred cccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcch---------HHHHHHHHHHHHHHHHHHHH
Confidence 44455555554 4556999999999999988888876 4889999999994 46666676666666655543
Q ss_pred C-----C--chhHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHH
Q 016338 295 A-----K--SPAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFL 367 (391)
Q Consensus 295 ~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~ 367 (391)
. + +.+......+++................+.+|++||++.|+.-....+++.+-..+...+.+... ....+
T Consensus 86 ~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~-~~fll 164 (250)
T PF06813_consen 86 AVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDP-SSFLL 164 (250)
T ss_pred HHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCCCh-HHHHH
Confidence 1 1 22333333333333333333444444446678999999999999999999998888887776521 22333
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 016338 368 TVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~ 386 (391)
.......+++.+...+.+.
T Consensus 165 ~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 165 FLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred HHHHHHHHHHHHHhhheec
Confidence 3333334444444444443
No 253
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.46 E-value=0.00014 Score=66.26 Aligned_cols=349 Identities=13% Similarity=0.042 Sum_probs=176.6
Q ss_pred chhhHHHH--hCCChhhHHHHHHHHHHHHHHHHHhhhhhhh-----hcCchHHHHH-HHHHHHHHHhhhhhhhc------
Q 016338 4 AVVPLAAK--FGWSSSFLGIVQSSFLWGYIFSSVIGGALVD-----KYGGKKVLAW-GVALWSLSTLLTPWAAT------ 69 (391)
Q Consensus 4 ~~~~i~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~-~~~~~~~~~~~~~~a~~------ 69 (391)
.+|.+.++ -+.|.+|.+...-+ ...+. .-++|.++.| |+||||.-++ ...+.++..+..+...+
T Consensus 22 siPflL~~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~ 99 (544)
T PF13000_consen 22 SIPFLLQSMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFD 99 (544)
T ss_pred cchhhhccccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhccc
Confidence 45777776 57788877654321 11111 2456666665 8999985443 23333333333322210
Q ss_pred --------------cch--HHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh
Q 016338 70 --------------HST--ASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS 133 (391)
Q Consensus 70 --------------~~~--~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~ 133 (391)
++. ..+...-++.=+-.+....+.-...-....+++++.+......+.+.|..++..+--.+-+
T Consensus 100 ~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlalns 179 (544)
T PF13000_consen 100 GVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALNS 179 (544)
T ss_pred ccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhCC
Confidence 011 1222223233333444445555555556677888888877777777777776655433321
Q ss_pred -----h--------cC---chhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChh-----HH--HHHHcCCCccc--ccC
Q 016338 134 -----T--------IG---ISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKS-----EL--RLIQAGKSDSV--KKR 188 (391)
Q Consensus 134 -----~--------~g---wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~--~~~ 188 (391)
. .| -..-..+.+.+-++..+...++.+|+|..+...+.+ +. +..+.+.++++ .++
T Consensus 180 ~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (544)
T PF13000_consen 180 PDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVISTE 259 (544)
T ss_pred HHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceecccccccchh
Confidence 0 01 011123345555555556666677765433211100 00 00000000100 001
Q ss_pred C-------CccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHH
Q 016338 189 N-------PPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASD 261 (391)
Q Consensus 189 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 261 (391)
+ -+.+.+++|-|.+..+.+.....-.++.........-+.| .|++.++.+.+..+ ....+++.|+++.
T Consensus 260 ~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li----~~P~qii~~~~~~ 334 (544)
T PF13000_consen 260 EILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLI----DFPFQIILPYYIG 334 (544)
T ss_pred hhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHH----hhhHHHHHHHHhh
Confidence 1 1233566778999888888888888888777777777888 79999887766533 5666677777777
Q ss_pred HHHhhccch-------hH-------HH--------HHHHHHHhH---hh-HHHHHHhhcCC----chhHHHHHH----HH
Q 016338 262 SLIKAGYSL-------TL-------VR--------KIMQSIGFI---GP-GVSLLCLNYAK----SPAVAAVLI----TI 307 (391)
Q Consensus 262 r~~~~~~~~-------~~-------~~--------~~~~~~~~~---~~-~~~~~~~~~~~----~~~~~~~~~----~~ 307 (391)
|+-+.+.+. +. .| ......++. .. .+........+ .+....... ++
T Consensus 335 Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l 414 (544)
T PF13000_consen 335 KWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVL 414 (544)
T ss_pred hhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHH
Confidence 764332210 00 00 000111111 11 11111111111 112222222 22
Q ss_pred HHHhhhhcccchhhhhhh-ccccchhHHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 016338 308 ALSLSSFSQAGYLLNIQE-IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~ 359 (391)
..+.....+....+.-.. ..|..-|+.+.+.|+..++|+---..+.=++.|.
T Consensus 415 ~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 415 SSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 223333333334444334 4568889999999999999987766666566654
No 254
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.44 E-value=2.6e-06 Score=79.43 Aligned_cols=146 Identities=13% Similarity=0.046 Sum_probs=111.4
Q ss_pred hhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHH
Q 016338 229 TVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIA 308 (391)
Q Consensus 229 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (391)
++.++...+.+.+.+.+.++.+++.+.++.+.||++- .+.+. ...+.-.+..++-...++.+...+.-++.
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~l--------s~~l~-~~~~~w~~~~~~~~~~~s~~~~ialr~ll 144 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPL--------SKGLS-VSGILWGLFGFLTAAVHSFPGLIALRFLL 144 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCCh--------HHHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4467778889999999999999999999999999983 22222 22222222222222356677777777778
Q ss_pred HHhhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhc------cccchhHHHHHHHHHHHHHHHHH
Q 016338 309 LSLSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQ------WLGSFQAFLTVTAGLYFVTTIFW 381 (391)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~ 381 (391)
+.+.+..+|....++...+. ++|+.-+|+.++..++|+++|+.+...+.+ ..| |++.|++-+++.+...+..
T Consensus 145 Gl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g-W~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 145 GLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG-WRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC-ceeehhHHHHHHHHHHheE
Confidence 88888888988888888777 899999999999999999999999998643 344 9999999998877777655
Q ss_pred HHh
Q 016338 382 NLY 384 (391)
Q Consensus 382 ~~~ 384 (391)
++.
T Consensus 224 f~~ 226 (495)
T KOG2533|consen 224 FFF 226 (495)
T ss_pred EEE
Confidence 443
No 255
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.42 E-value=1.8e-05 Score=70.48 Aligned_cols=148 Identities=18% Similarity=0.145 Sum_probs=124.4
Q ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhh-hcCchHHHHHHHHHHHHHHhhhhhh-hccchHHHHHHHHHHHhhh
Q 016338 9 AAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVD-KYGGKKVLAWGVALWSLSTLLTPWA-ATHSTASLLAVRAFFGLAE 86 (391)
Q Consensus 9 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~~~~~~~~~a-~~~~~~~~~~~r~l~G~g~ 86 (391)
.+-||.|..|...+++.+..|..++....|.+.. |.++|+.-.+++....++..+..++ ...+.+.+...-++.|++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 4558999999999999999999999999999888 6788888888988888777664332 3467889999999999999
Q ss_pred hchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh----------cCchhHHHHHHHHHHHHHHHHh
Q 016338 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST----------IGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~----------~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
|.......+...|..++++.|..+|.+.....++..++..+++.+.|. .++-.+|.+.++..++...+..
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987662 2466677777777666555444
No 256
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.34 E-value=7.3e-06 Score=78.52 Aligned_cols=140 Identities=11% Similarity=0.045 Sum_probs=115.1
Q ss_pred hCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHH
Q 016338 231 FNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALS 310 (391)
Q Consensus 231 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (391)
...+.....+..++..++..+|.++.|.++||+| ||.++..+.+...++.+.....++.....+.=++.+.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~G---------Rk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~ 183 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFG---------RKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGF 183 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcc---------cHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 4556677788888999999999999999999999 5677788888888888888888898888888777777
Q ss_pred hhhhcccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 016338 311 LSSFSQAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
+..........+..|..+ ++|+.+..+ ......++.+++...+++.. +|++.++..........+.+++
T Consensus 184 ~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l 253 (521)
T KOG0255|consen 184 FGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFL 253 (521)
T ss_pred hccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHc
Confidence 766666777777777655 999999999 88888999999999999887 3888888888777777666433
No 257
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.33 E-value=0.00014 Score=69.32 Aligned_cols=154 Identities=16% Similarity=0.089 Sum_probs=121.7
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhc-CchHHHHHHHHHHHHHHhhhhhhh-----cc------
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGVALWSLSTLLTPWAA-----TH------ 70 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~~~~~~~~~a~-----~~------ 70 (391)
.++..+.+++|.+...+.-..+.+.-......+..+.++|-| ||-+++.++.++...|..+..+.. .+
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~ 138 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK 138 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence 345667888898888888899999999999999999999976 999999999999988865543221 00
Q ss_pred ---------c---hHHHHHHHHHHHhhhhchhhhHHHHhhhhcC---cc-c--hhhHHHHHHhhhhhhHHHHhhHHHHHH
Q 016338 71 ---------S---TASLLAVRAFFGLAEGVAMPAMSTLTSRWFP---SH-E--RASAIGICMGGFHLGNVVGLLLTPIML 132 (391)
Q Consensus 71 ---------~---~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~---~~-~--rg~~~~~~~~~~~lg~~~g~~~~~~l~ 132 (391)
+ ...+..+.-+..+|.|..-|...+.-+|-++ ++ + +...++++....+.|..++..+..+.-
T Consensus 139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq 218 (571)
T KOG1237|consen 139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ 218 (571)
T ss_pred CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh
Confidence 1 1356667777888999999999999999998 22 2 237789999999999999998888887
Q ss_pred hhcCchhHHHHHHHHHHHHHHHHh
Q 016338 133 STIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 133 ~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
++.+|.+.|.+..+...+..++.+
T Consensus 219 ~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 219 DNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hcccceeeccHHHHHHHHHHHHHH
Confidence 889999999888777666555443
No 258
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.31 E-value=1.3e-05 Score=73.29 Aligned_cols=111 Identities=19% Similarity=0.208 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccc-------hHHHHHHHHHHHhhhhchhhhHHHHhhhhcCcc---chhhHHHHHHhhh
Q 016338 48 KVLAWGVALWSLSTLLTPWAATHS-------TASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSH---ERASAIGICMGGF 117 (391)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~a~~~~-------~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~---~rg~~~~~~~~~~ 117 (391)
|++.++.++..+|.++..++..++ .+.++++-.+.++|.|..-|...++.+|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 678889999999998854443232 257889999999999999999999999999765 4778899999999
Q ss_pred hhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHhhc
Q 016338 118 HLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWTSK 158 (391)
Q Consensus 118 ~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 158 (391)
++|..++..+.+++-++.||.+.|.+.++..++..+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999888877766655443
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.26 E-value=1e-05 Score=54.74 Aligned_cols=62 Identities=15% Similarity=0.093 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 204 TVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (391)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 266 (391)
..-..+++.+.+...+..++|.|+++ .|+|+.+.|.+.++..+...++.++.|.++||.+++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 34566777888888899999999998 899999999999999999999999999999999975
No 260
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.21 E-value=5.2e-06 Score=56.23 Aligned_cols=55 Identities=24% Similarity=0.303 Sum_probs=48.3
Q ss_pred cchhhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHH
Q 016338 3 VAVVPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALW 57 (391)
Q Consensus 3 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 57 (391)
|.+|...++.|.|+.|+|.+.++..+...++++++|.++||+++++.+.....+.
T Consensus 21 Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 21 PFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4566677788999999999999999999999999999999999998877765543
No 261
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.18 E-value=1.8e-08 Score=94.61 Aligned_cols=157 Identities=18% Similarity=0.262 Sum_probs=106.6
Q ss_pred hhHHHHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhh--h-hhccc-----hHHHHH
Q 016338 6 VPLAAKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTP--W-AATHS-----TASLLA 77 (391)
Q Consensus 6 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~--~-a~~~~-----~~~~~~ 77 (391)
|.+.++.+.++. -.......+...++.+....+.||+|||+.++.+..+.+++.+..+ . ...++ ......
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 354 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVF 354 (451)
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 445556666555 1222233344556677777999999999999999988888877764 1 11121 222222
Q ss_pred HHHH-HHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 78 VRAF-FGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 78 ~r~l-~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
.... ...+. ...+....+..|.+|.+.|.++.++......++..+++.+...+.+..+-...+.+.+...++..+..+
T Consensus 355 ~~l~~~~~~~-g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~ 433 (451)
T PF00083_consen 355 LALFFAFFSL-GWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVY 433 (451)
T ss_pred eeeccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhhee
Confidence 2211 12222 233666788899999999999999999999999999998888877766634566666777777777888
Q ss_pred hccccCCCC
Q 016338 157 SKVTNDPCN 165 (391)
Q Consensus 157 ~~~~~~~~~ 165 (391)
++.||+..+
T Consensus 434 ~~lpET~g~ 442 (451)
T PF00083_consen 434 FFLPETKGK 442 (451)
T ss_pred EEEeeCCCC
Confidence 888987654
No 262
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.12 E-value=0.00015 Score=70.45 Aligned_cols=164 Identities=12% Similarity=-0.015 Sum_probs=112.1
Q ss_pred HHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhc
Q 016338 215 GYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNY 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
.++++...+..|+.+.+|++...+..+...+....-+..+++|++.|++-.+ + ..+..+.++..++..++..
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~-------~-~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK-------F-KTILYLSIVYVVGHALLSF 73 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------H-HHHHHHHHHHHHHHHHHHh
Confidence 3456667777888888999999888888888888888899999999997543 3 3334444444444444433
Q ss_pred CCc--------hhHHHHHHHHHHHhhhhcccchhhhhhhccc-c---chhHHHHHHHHHHHHHHHHHHHHhhHhhcccc-
Q 016338 295 AKS--------PAVAAVLITIALSLSSFSQAGYLLNIQEIAP-D---CAGFLHGIANSAGTLAAIISTIGTGYFVQWLG- 361 (391)
Q Consensus 295 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g- 361 (391)
... ....+..+.+..+..+..-+...+...+.++ + .+-+...+.....++|+.+++.+.+++.+..+
T Consensus 74 ~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~ 153 (654)
T TIGR00926 74 GAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC 153 (654)
T ss_pred ccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 211 1123333444444455556666666666544 2 46778888999999999999999999985531
Q ss_pred -----chhHHHHHHHHHHHHHHHHHHHhcc
Q 016338 362 -----SFQAFLTVTAGLYFVTTIFWNLYST 386 (391)
Q Consensus 362 -----~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (391)
+|...|.+.++..+++.+.+...++
T Consensus 154 fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 154 FGCQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3778888888888888877765443
No 263
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.07 E-value=8.2e-06 Score=73.18 Aligned_cols=128 Identities=15% Similarity=0.135 Sum_probs=97.8
Q ss_pred HHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccc--------hHHHHHHHHHHHhhhhchhhhHHHHhhhhcCc
Q 016338 32 FSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHS--------TASLLAVRAFFGLAEGVAMPAMSTLTSRWFPS 103 (391)
Q Consensus 32 ~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~--------~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~ 103 (391)
.+-.+...+.|+.|||++.+-+.+++.+..+..+.. .| ...+.+..++.-+|-. .....+-+|.+|.
T Consensus 363 PGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~--y~~~~~~~Gf~v~y~l~~ff~NFGPn---~ttfivpaE~FPa 437 (538)
T KOG0252|consen 363 PGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGP--YNQLENTIGFVVLYSLTFFFGNFGPN---ATTFIVPAEIFPA 437 (538)
T ss_pred CceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCC--cccccccCceeehHHHHHHHHhcCCC---ceeEEeehhhchH
Confidence 355667788999999999999999999988887443 44 1122233333333322 3445566899999
Q ss_pred cchhhHHHHHHhhhhhhHHHHhhHHHHHHh-----hcCchhHHHHHHHHHHHHHHHHhhccccCCCC
Q 016338 104 HERASAIGICMGGFHLGNVVGLLLTPIMLS-----TIGISGPFILFSSLGLLWLSTWTSKVTNDPCN 165 (391)
Q Consensus 104 ~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~ 165 (391)
+-|+..-|+.....-.|.++|...-..+.+ ..+.|+++++.+...++..+..+++ ||+..+
T Consensus 438 rvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEtk~~ 503 (538)
T KOG0252|consen 438 RVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PETKGK 503 (538)
T ss_pred HHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-eccccc
Confidence 999999999999999999999999999988 7789999999999888877766554 565443
No 264
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=98.00 E-value=0.00034 Score=58.48 Aligned_cols=101 Identities=18% Similarity=0.138 Sum_probs=60.7
Q ss_pred cchhhHHHHHHhhhhhhHHHHhhHHHHH---H--hhcCchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHH
Q 016338 104 HERASAIGICMGGFHLGNVVGLLLTPIM---L--STIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQ 178 (391)
Q Consensus 104 ~~rg~~~~~~~~~~~lg~~~g~~~~~~l---~--~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (391)
|+|+........+.++|.++.-..--.- . ..-+|++.+.+.+++.++-+++...+-.|-+...++ +++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k---- 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEK---- 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-ccccc----
Confidence 6677777777788888887765442111 1 123599999999988877666666553332111111 01100
Q ss_pred cCCCcccccCCCccHHHhhcCCchHHHHHHHHHHH
Q 016338 179 AGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNN 213 (391)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (391)
++.+.+++.+..+.+|++..|...+.+...-
T Consensus 77 ----~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 77 ----ENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ----ccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 0112223467899999999998877666543
No 265
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.00 E-value=0.0032 Score=55.56 Aligned_cols=151 Identities=14% Similarity=0.082 Sum_probs=90.3
Q ss_pred HHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHH
Q 016338 226 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLI 305 (391)
Q Consensus 226 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (391)
.+++ +|+++.+.+.++......+.+...+.|.+.||+||| +..+. ..+...+..+. -..++...+++.=
T Consensus 60 LY~~-yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk--------~~cl~-~cily~~scl~-k~~~~~~~L~~GR 128 (354)
T PF05631_consen 60 LYES-YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK--------KACLL-FCILYSLSCLT-KHSSNYPVLLLGR 128 (354)
T ss_pred HHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch--------HHHHH-HHHHHHHHHHH-HhccccHHHHHHH
Confidence 3344 899999999999998899999999999999999964 23333 33333333332 2334455554444
Q ss_pred HHHHHhhhhcccchhhh-hhhc-----cccchhHHHHHHHHH-HHHHHHHHHHHhhHhhccccc-hhHHHHHHHHHHHHH
Q 016338 306 TIALSLSSFSQAGYLLN-IQEI-----APDCAGFLHGIANSA-GTLAAIISTIGTGYFVQWLGS-FQAFLTVTAGLYFVT 377 (391)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~g~~~~~-~~~g~~i~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~ 377 (391)
++++..........-+. +.|. +++..+...+..... ..+-.+.+..+.-.+.|..|. ...+|.....+.+++
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 44444444443332222 2222 224445555544422 333445555555566666552 477888888888888
Q ss_pred HHHHHHhccC
Q 016338 378 TIFWNLYSTG 387 (391)
Q Consensus 378 ~~~~~~~~~~ 387 (391)
.++.....++
T Consensus 209 ~~~I~~~W~E 218 (354)
T PF05631_consen 209 AVLILKTWPE 218 (354)
T ss_pred HHHHHhcccc
Confidence 7776554444
No 266
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.94 E-value=0.016 Score=53.26 Aligned_cols=246 Identities=9% Similarity=0.003 Sum_probs=147.9
Q ss_pred ChhhHHHHHHHHHH-HHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhc-------cc---------------
Q 016338 15 SSSFLGIVQSSFLW-GYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAAT-------HS--------------- 71 (391)
Q Consensus 15 s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~-------~~--------------- 71 (391)
+++.+.++-+..-+ +..+..++.++++++..|++++-+.+..+....+++++..- ++
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45667888888888 77788999999999999999998888888888877765431 11
Q ss_pred --------hHHHHHHHHHHHhhhhchhh-hHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC------
Q 016338 72 --------TASLLAVRAFFGLAEGVAMP-AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIG------ 136 (391)
Q Consensus 72 --------~~~~~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g------ 136 (391)
.|...+.-.+.-+=.+.... .-....+|....+|-.|..++.+.+.+++..++..+..++.++-.
T Consensus 139 ~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~ 218 (509)
T COG3202 139 KWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEF 218 (509)
T ss_pred eeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHH
Confidence 13333333444333333322 345667899988999999999999999999999988888765221
Q ss_pred ----chhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHHHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHH
Q 016338 137 ----ISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLIQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITN 212 (391)
Q Consensus 137 ----wr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (391)
-+..+.+.+....+...+..+.-+...++++...+ ...+++.++.+-.-..+.+.+.|+|..+.+++...++
T Consensus 219 ~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~----~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y 294 (509)
T COG3202 219 KDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLR----AKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAY 294 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHH----HhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 23444555555455444444433332322221100 0001111111222334667788889888888888887
Q ss_pred HHHHHHHHHhhHHHHHhhhCCCcchh---hHHhhhHHHH-HHHHHHHHHHHHHHHH
Q 016338 213 NWGYFVLLSWMPIYFNTVFNVNLKQA---AWFSAVPWGT-MAVSGYMAGKASDSLI 264 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~-~~~~~~~~g~l~dr~~ 264 (391)
+.+...+....-.-.++.+..+.+-. +.+....++. ..+...+++.+.+|.|
T Consensus 295 ~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G 350 (509)
T COG3202 295 GVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG 350 (509)
T ss_pred HHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh
Confidence 77776666433333333333222222 2233334444 3344567777888777
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.90 E-value=0.0027 Score=58.86 Aligned_cols=52 Identities=19% Similarity=0.171 Sum_probs=35.4
Q ss_pred chHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhH
Q 016338 71 STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLL 127 (391)
Q Consensus 71 ~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~ 127 (391)
.++..++.-++.|++.+........+.+ .+|++ .++.+..+.+++++++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 4666677788889998888777777666 56643 4555666666666666544
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.85 E-value=0.00033 Score=65.13 Aligned_cols=159 Identities=21% Similarity=0.227 Sum_probs=102.3
Q ss_pred hhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC----c
Q 016338 222 WMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK----S 297 (391)
Q Consensus 222 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 297 (391)
-...|+++++|+++.+...+.....+.. ...++.|.++|.+.-.|++ ||..+.++.++.......+...+ +
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~r----r~~Y~~i~~~~~~~~~~~~~~~~~~~~s 85 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYR----RKPYMIIGWLLGAVSALVLALLPASESS 85 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCc----chHHHHHHHHHHHHHHHHHHhcccccch
Confidence 3445778889999998887766654444 4568999999998532222 66666666666644444443322 2
Q ss_pred hhHHHHHHHHHHHhhhhcccchhhhhhhc---cccchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHH
Q 016338 298 PAVAAVLITIALSLSSFSQAGYLLNIQEI---APDCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLY 374 (391)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~ 374 (391)
.....+..++.................|. .|+.++...+.......+|+.++..+.|.+.+..+ ++..|.+.+.+.
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~ 164 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALP 164 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHH
Confidence 22223333333333344444444444443 34448889999999999999999999999999877 777787777666
Q ss_pred HHHHHHHHHhcc
Q 016338 375 FVTTIFWNLYST 386 (391)
Q Consensus 375 ~~~~~~~~~~~~ 386 (391)
.+..+..+...+
T Consensus 165 ~l~~~~~~~~~~ 176 (433)
T PF03092_consen 165 LLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHhhh
Confidence 666554444433
No 269
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.81 E-value=0.00074 Score=62.78 Aligned_cols=130 Identities=15% Similarity=0.145 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchhhhhhh
Q 016338 246 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYLLNIQE 325 (391)
Q Consensus 246 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (391)
++...+..+..|.++||+||| ..+........+......... ++..+ ..-..+..........+++.|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk---------~~L~~~~~~~~l~~~~~~~~~--~~~~~-~~~l~g~~~~~~s~~~a~vad 139 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRK---------VVLLLPLFGTILPALCLLFQG--YWFFL-LLGLSGGFSAIFSVGFAYVAD 139 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhh---------hhHHHHHHHHHHhHHHHHHHH--HHHhh-hcccccchhhhhhhhhhheee
Confidence 567778889999999999954 454455544444444443322 22222 111222233445666777888
Q ss_pred ccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 326 IAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 326 ~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
... +.|....|+.+.....+..++|.+.+.+.+..| +...+.+..+..+++.+..+...+++
T Consensus 140 is~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~-~a~~f~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 140 ISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG-IALVFLIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC-chHHHHHHHHHHHHHHHHHhhccccc
Confidence 777 899999999999999999999999999999977 88899998888888888777665543
No 270
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.77 E-value=0.00044 Score=63.74 Aligned_cols=179 Identities=12% Similarity=0.020 Sum_probs=105.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHh-hhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 016338 202 SWTVIIANITNNWGYFVLLSWMPIYFNT-VFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 280 (391)
.+...+..++.......+..-.-+|+++ +.+-+.+..|+..+...++.++..+..|+...|.+.- |.-++.
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~--------k~Pli~ 107 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV--------KKPLIV 107 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc--------ccCHHH
Confidence 3444444444444443333333456665 2456667789999999999999999999999998853 223344
Q ss_pred HhHhhHHHHHHh---hcCCchhHHHHHH-HHHHHhhhhcccchhhhhhhc-cccchhHHHHHHHHHHHHHHHHHHHHhhH
Q 016338 281 GFIGPGVSLLCL---NYAKSPAVAAVLI-TIALSLSSFSQAGYLLNIQEI-APDCAGFLHGIANSAGTLAAIISTIGTGY 355 (391)
Q Consensus 281 ~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 355 (391)
+.+.+.++-++. ...++....+.++ =+..+.+.......-.+..+. .+++|.++++..+....+|..+||.+...
T Consensus 108 s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 108 SFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 555555554444 2333322222221 111122212223334455553 44888888888888777788888766554
Q ss_pred hhc------------cccchhHHHHHHHHHHHHHHHHHHHhccCc
Q 016338 356 FVQ------------WLGSFQAFLTVTAGLYFVTTIFWNLYSTGE 388 (391)
Q Consensus 356 l~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (391)
+.. ++..|..+-++..+..++..+...+..++.
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeec
Confidence 432 123477788888888888877776665543
No 271
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.71 E-value=0.00091 Score=57.09 Aligned_cols=319 Identities=13% Similarity=0.092 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHhhh
Q 016338 20 GIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSR 99 (391)
Q Consensus 20 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~ 99 (391)
|.+.-.--+...+..+....+.||+.--.=..+..++.+.+..+. +++++.++-+.+-.+..++.|....+-..+-+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lV--afs~s~~~sL~GV~~aSissGlGEiTFL~lss- 141 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLV--AFSNSVPMSLLGVVFASISSGLGEITFLALSS- 141 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEE--EeccchhHHHhhhhhhhhcCCcceeehhhhhc-
Confidence 444444445556667777788888754333444556667777777 55699999999999999998887665444433
Q ss_pred hcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHh--hcCchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHHH
Q 016338 100 WFPSHERASAIGICMGGFHLGNVVGLLLTPIMLS--TIGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRLI 177 (391)
Q Consensus 100 ~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (391)
.+|+ ...+-++.+.+.+..+|..--..+.+ .+.-|.+.+++..+.++.+...++.+++++.......+++....
T Consensus 142 ~Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~~ptl~~~~~~~ 217 (409)
T KOG3880|consen 142 RYPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVYSPTLQPSTEII 217 (409)
T ss_pred cCCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccccCCCcCccceec
Confidence 3332 34556666666666776644444444 34578888888888888777777776665544321111110000
Q ss_pred Hc---CCCccccc---CCCccHHHhhc-CCchHHHHHHHHHHHHHHHHHHHhhHHHHHh--hhCCCcc---hhhHHhhhH
Q 016338 178 QA---GKSDSVKK---RNPPSLRHLLS-KLPSWTVIIANITNNWGYFVLLSWMPIYFNT--VFNVNLK---QAAWFSAVP 245 (391)
Q Consensus 178 ~~---~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~---~~~~~~~~~ 245 (391)
++ ..+.++++ +.....++-++ -+......+-....++..+.++.-+...+.- ..|.+.. |.-+....+
T Consensus 218 ~~~~~~~~a~e~~sv~s~~~~~~e~~~~i~pll~~MvPL~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlY 297 (409)
T KOG3880|consen 218 PSQYLPFEAAEEKSVPSRRLGLKETLKRIKPLLKYMVPLALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLY 297 (409)
T ss_pred cCCCCcccccccccCchhhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheee
Confidence 00 00001111 11122233222 1233334455555555555555433222111 1233322 233444444
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH---hHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccc-hhh
Q 016338 246 WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIG---FIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAG-YLL 321 (391)
Q Consensus 246 ~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 321 (391)
.++-.+.+--. |+- ..+ ..+.+.+. -++..+.-..+++.++.+...+..+.-+..++..+.. ...
T Consensus 298 QlGVFiSRSS~-----~~~----~~p--~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~ 366 (409)
T KOG3880|consen 298 QLGVFISRSSI-----NLF----TMP--YLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHN 366 (409)
T ss_pred eeeEEEEeccc-----eEE----ech--HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHH
Confidence 33332222110 000 000 01111111 1112222234456667777666666666665555444 445
Q ss_pred hhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHh
Q 016338 322 NIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYF 356 (391)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l 356 (391)
+..|..|++|--+++.....-++|-.++..+.=.+
T Consensus 367 i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 367 IHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 55668889999999988877777776666554333
No 272
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.54 E-value=0.0022 Score=57.95 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=89.5
Q ss_pred HHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC-----chhH
Q 016338 226 YFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK-----SPAV 300 (391)
Q Consensus 226 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 300 (391)
+.++.+| +.+.+-+...++.+..+...+.+-|+.||+|- |....++....+++..+=.... +...
T Consensus 70 ~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GL---------R~a~llgt~ln~iGa~Ir~iss~p~v~~~f~ 139 (480)
T KOG2563|consen 70 YVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGL---------RTALLLGTVLNGIGAWIRLISSLPFVPPLFR 139 (480)
T ss_pred HHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccch---------HHHHHHHHHHHHHHHHHhhhccCccccccch
Confidence 4455566 66667778888899999999999999999994 4555666666666655432221 2222
Q ss_pred HHHHHHHHHHhhhhcccch----hhhhhh-ccccchhHHHHHHHHHHHHHHHHHHHHhhHhhccc----c-chh--HHHH
Q 016338 301 AAVLITIALSLSSFSQAGY----LLNIQE-IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQWL----G-SFQ--AFLT 368 (391)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~----g-~~~--~~~~ 368 (391)
. -+...+....+...+-. .-.... ..|++|+.+..+..+...+|.+++..+...+..+. + .+. ..+.
T Consensus 140 ~-~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~ 218 (480)
T KOG2563|consen 140 R-PLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFL 218 (480)
T ss_pred h-hhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHH
Confidence 1 12222222222222221 122222 45599999999999888899999888888776553 1 122 2344
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 016338 369 VTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~ 387 (391)
...++..+-+.+..+.+++
T Consensus 219 ~~~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 219 GVECLAALLLALVLFVFTK 237 (480)
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 3444444444444444444
No 273
>PRK03612 spermidine synthase; Provisional
Probab=97.51 E-value=0.011 Score=56.33 Aligned_cols=174 Identities=11% Similarity=0.068 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhh
Q 016338 206 IIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGP 285 (391)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
.+..++..++...+.......+...+|.+....+.+.+.+..+..+|..+++++.++..++. ...-+.++.+..
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~------~~~e~~i~l~~~ 93 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF------VAVELLLALLGG 93 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH------HHHHHHHHHHHH
Confidence 34444555555556666666666668888888888889888889899888887764433210 001111111111
Q ss_pred HHHHHH---hhcCCch-hHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhc-cc
Q 016338 286 GVSLLC---LNYAKSP-AVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQ-WL 360 (391)
Q Consensus 286 ~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~-~~ 360 (391)
....++ ....... .......+......+...|...-...+...++.+...|-......+|+.+|+.+.+++.- ..
T Consensus 94 ~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l 173 (521)
T PRK03612 94 LSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL 173 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc
Confidence 111111 1110001 111111222223333334433333333333346777888999999999999999998654 77
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhc
Q 016338 361 GSFQAFLTVTAGLYFVTTIFWNLYS 385 (391)
Q Consensus 361 g~~~~~~~~~~~~~~~~~~~~~~~~ 385 (391)
|.....+.+..+..+++.+..+..+
T Consensus 174 G~~~t~~~~a~l~~~~a~~~~~~~~ 198 (521)
T PRK03612 174 GLIRTAALTGSLNLLAALVFLWLFR 198 (521)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8444444444444444434433333
No 274
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.41 E-value=0.011 Score=53.55 Aligned_cols=161 Identities=11% Similarity=-0.009 Sum_probs=110.0
Q ss_pred HHHhhHHHHHhh-hCCCcchhhHHhhhH-HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCC
Q 016338 219 LLSWMPIYFNTV-FNVNLKQAAWFSAVP-WGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAK 296 (391)
Q Consensus 219 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~-~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (391)
...++..|+.+. .|++.++..--.-+. .-...+.-+....+.|.++ -|.+++++.+...+...++.+.+
T Consensus 22 sEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~---------Ykpviil~~~~~i~t~~lll~~~ 92 (412)
T PF01770_consen 22 SEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLR---------YKPVIILQALSYIITWLLLLFGT 92 (412)
T ss_pred CCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHHHHHHHHC
Confidence 446788888886 889888765443333 3355566678889999998 55777777777666666666666
Q ss_pred chhHHHHHHHHHHHhhhhcccchhhhhhh-ccccchhHHHHHHHHHHHHHHHHHHHHhhHhhcc-ccchhHHHHHHHHHH
Q 016338 297 SPAVAAVLITIALSLSSFSQAGYLLNIQE-IAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQW-LGSFQAFLTVTAGLY 374 (391)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~-~g~~~~~~~~~~~~~ 374 (391)
+....-+.-++.+.... .-...++++-. ++|++.-++.+........|..++..++-.+.+. ..+|.....+.....
T Consensus 93 sv~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~ 171 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASV 171 (412)
T ss_pred cHHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 66655555444443333 23444455443 4557888889999999888988888888777663 235777777777777
Q ss_pred HHHHHHHHHhccCcc
Q 016338 375 FVTTIFWNLYSTGER 389 (391)
Q Consensus 375 ~~~~~~~~~~~~~~~ 389 (391)
.++.+..+++++.+|
T Consensus 172 ~~a~~~~~fLP~~~~ 186 (412)
T PF01770_consen 172 SLALLIALFLPMPKR 186 (412)
T ss_pred HHHHHHHHHcCCCCc
Confidence 777777777776654
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.28 E-value=0.02 Score=51.61 Aligned_cols=273 Identities=15% Similarity=0.053 Sum_probs=111.7
Q ss_pred chHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHH---HHhhcC-chhHHHHHHH
Q 016338 71 STASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPI---MLSTIG-ISGPFILFSS 146 (391)
Q Consensus 71 ~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~---l~~~~g-wr~~f~~~~~ 146 (391)
.+...++.-.+.+.+.+..........++ +|+|.-+-. ..+.++++.+..++.-. ..+... =-..|...+.
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqav----m~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAV----MSGQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHH----HhcchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 35555666777788777766655555554 555543332 33444444444333211 111111 1123444444
Q ss_pred HHHHHHHHHhhccccCCCCCCCCChhHH--HHHHc-C-CCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHh
Q 016338 147 LGLLWLSTWTSKVTNDPCNSPFVSKSEL--RLIQA-G-KSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSW 222 (391)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (391)
+..+..+..+...|+.|--+....++.. ...++ + +++.+.++...+.++++|+- .--.+.....+......
T Consensus 191 ~~~llC~i~y~~l~~lpf~~yy~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~k~-----~~~~~~i~lvy~VTLsi 265 (406)
T KOG1479|consen 191 VILLLCFVLYLVLPKLPFVRYYREKAGSIGSKLAAEGIESDSSLSNEDDSLWDIFKKI-----KDLAFNIFLVYFVTLSI 265 (406)
T ss_pred HHHHHHHHHHHHhhcchHHHHHhhhcccccccccccccccccccccccchHHHHHHHH-----HHHhhchheeeeeeeEe
Confidence 4444444444455555432111000000 00000 0 00111111112445555431 11112222333444456
Q ss_pred hHHHHHhhhCCC---cchhhHHhhh-HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCch
Q 016338 223 MPIYFNTVFNVN---LKQAAWFSAV-PWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSP 298 (391)
Q Consensus 223 ~~~~~~~~~g~~---~~~~~~~~~~-~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (391)
+|-+..+..+-+ ..-.-+.... +.+...+|.+...++-++-. |........|...+..+..+-.-- .-...++.
T Consensus 266 FPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~-r~l~i~v~lR~lfiPlF~~cn~~~-~~v~~~~~ 343 (406)
T KOG1479|consen 266 FPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDP-RKLTIPVLLRLLFIPLFLLCNYPP-LPVVFESD 343 (406)
T ss_pred cchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCC-ceehHHHHHHHHHHHHHHHhccCC-CCceecCc
Confidence 777766643222 2223333444 66777777666666554432 211111111111111111000000 00112344
Q ss_pred hHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhH
Q 016338 299 AVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGY 355 (391)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~ 355 (391)
++......+.+...+......+.+..+..|.+...+.|....+...++.....+.++
T Consensus 344 ~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 344 GWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred hHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 555555555556666666666677666555333344444444444444333333333
No 276
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.11 E-value=0.075 Score=41.53 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=76.8
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhhhhcccchh
Q 016338 241 FSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLSSFSQAGYL 320 (391)
Q Consensus 241 ~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (391)
-.++......+..++.+.+.+++| .|+.+.++.+...+....... ++.+.......+.+...+..+...-
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg---------~K~sm~lg~~~y~~y~~~~~~-~~~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLG---------PKWSMILGSLGYAIYIASFFY-PNSYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHh---------hHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHhhhhHHhhHhhh
Confidence 355666777888889999999999 456667777666655544433 4455555666666666677777776
Q ss_pred hhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhh
Q 016338 321 LNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFV 357 (391)
Q Consensus 321 ~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 357 (391)
.++.+..+ +.+++-.++...+.+.+..+|..+.-.+.
T Consensus 112 ~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666 78899999999999888888877665554
No 277
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.05 E-value=0.0062 Score=41.73 Aligned_cols=78 Identities=15% Similarity=0.232 Sum_probs=61.1
Q ss_pred HHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHh
Q 016338 213 NWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCL 292 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
..+-+.+...+|...+| .++|..+++++.+...++..+|.+...++.++.+ ++..+..+.+...+.....
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSR---------PRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------HHHHHHHHHHHHHHHHHHH
Confidence 34556777888877777 7999999999999999999999999999888754 3455567777777777777
Q ss_pred hcCCchhH
Q 016338 293 NYAKSPAV 300 (391)
Q Consensus 293 ~~~~~~~~ 300 (391)
...++.+.
T Consensus 75 a~~~~~~~ 82 (85)
T PF06779_consen 75 ALTHSFWL 82 (85)
T ss_pred HHHhchHH
Confidence 76665544
No 278
>PRK03612 spermidine synthase; Provisional
Probab=96.92 E-value=0.033 Score=53.07 Aligned_cols=140 Identities=21% Similarity=0.232 Sum_probs=84.8
Q ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHH---Hhhhhhh--hccch-HHHHHHHHHHH
Q 016338 10 AKFGWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLS---TLLTPWA--ATHST-ASLLAVRAFFG 83 (391)
Q Consensus 10 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~---~~~~~~a--~~~~~-~~~~~~r~l~G 83 (391)
.-+|-+..+.+.+.+++..|.++|+...+++.++--++ ...+-..+..++ ..+.... ....+ ..++..-++.+
T Consensus 43 ~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 121 (521)
T PRK03612 43 YLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIG 121 (521)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677888899999999999999999999887443222 222221111111 1111001 00111 12234445667
Q ss_pred hhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH-hhcCchhHHHHHHHHHHHH
Q 016338 84 LAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML-STIGISGPFILFSSLGLLW 151 (391)
Q Consensus 84 ~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~-~~~gwr~~f~~~~~~~~~~ 151 (391)
+..|...|....+..+.. .++-++..|-......+|.++|.++.+++. ..+|-....++.+.+.++.
T Consensus 122 ~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~ 189 (521)
T PRK03612 122 LLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLA 189 (521)
T ss_pred HHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 888888888777666543 234577888899999999999999887754 4566544444444444433
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.83 E-value=0.14 Score=47.93 Aligned_cols=148 Identities=15% Similarity=0.044 Sum_probs=82.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCC-----CcchhhHHhhhHHHHHHHH-HHHHHHHHHHHHhhccchhHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNV-----NLKQAAWFSAVPWGTMAVS-GYMAGKASDSLIKAGYSLTLVR 274 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~~~~~~~~~~~~ 274 (391)
++....+..++..+.++.. --++|.... +++....+.....+...+. .++.+++++|+++++......
T Consensus 8 k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~- 81 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI- 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH-
Confidence 4444455555444443322 335555555 3345666665555555555 788999999999763322111
Q ss_pred HHHHHHHhHhhHHHHHHhhcCCc--------------------------hhHHHHHHHHHHHhhhhccc-chhhhhhhcc
Q 016338 275 KIMQSIGFIGPGVSLLCLNYAKS--------------------------PAVAAVLITIALSLSSFSQA-GYLLNIQEIA 327 (391)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 327 (391)
............++.+..+. .|......+..-.......+ ..+..++|..
T Consensus 82 ---~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~ 158 (472)
T TIGR00769 82 ---SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT 158 (472)
T ss_pred ---HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 01111111111121111111 11111222222233333333 5677889988
Q ss_pred c-cchhHHHHHHHHHHHHHHHHHHHHhhHhh
Q 016338 328 P-DCAGFLHGIANSAGTLAAIISTIGTGYFV 357 (391)
Q Consensus 328 ~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~ 357 (391)
. ++..+-.++....+++|..+++.+..++.
T Consensus 159 t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 159 TIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 88999999999999999999999998877
No 280
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.62 E-value=0.2 Score=43.67 Aligned_cols=136 Identities=16% Similarity=0.127 Sum_probs=83.3
Q ss_pred HHHHHHHHhhHHHHHhhhCCCc--chhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHH
Q 016338 214 WGYFVLLSWMPIYFNTVFNVNL--KQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLC 291 (391)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
..........+.+..+ .+.+. ...+.......+....+.+..|.+.||.|+| .....+..........
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~---------~~~~~~~~~~~~~~~~ 85 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR---------KVLIIGLLLFLLGTLL 85 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch---------HHHHHHHHHHHHHHHH
Confidence 3334444556656655 44444 4678888888888888889999999999754 2222333222222222
Q ss_pred hhcCCc--hhHHHHHHHHHHHhhhhcccchhhhhhhcccc--chhHHHHHHHH-HHHHHHHHHHHHhhHhhcc
Q 016338 292 LNYAKS--PAVAAVLITIALSLSSFSQAGYLLNIQEIAPD--CAGFLHGIANS-AGTLAAIISTIGTGYFVQW 359 (391)
Q Consensus 292 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~-~~~~g~~i~~~~~g~l~~~ 359 (391)
.....+ ...........+...+...+.......+..|+ +|+...+.... ....+..++|.+.+.+.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 86 LALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222 33333333333333445566677777787774 78888888888 5777888888777777655
No 281
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.33 E-value=0.88 Score=42.21 Aligned_cols=177 Identities=12% Similarity=0.189 Sum_probs=103.0
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 280 (391)
..+.+....++.....-....-.|.++.+.+.-+-.-.+.....-.+..++..+..|...||..|.+..+... ..--.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l--~~Qn~ 80 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSL--VVQNL 80 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHH--HHHHH
Confidence 4456677888888888888888999999976656555666666667778888889999999987654221111 11111
Q ss_pred HhHhhHHHHHH-hhcCCc----hhHHHHHHH---HHHHhhhhcccchh-hhhh-------hccccchhHHHHHHHHHHHH
Q 016338 281 GFIGPGVSLLC-LNYAKS----PAVAAVLIT---IALSLSSFSQAGYL-LNIQ-------EIAPDCAGFLHGIANSAGTL 344 (391)
Q Consensus 281 ~~~~~~~~~~~-~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~g~~~~~~~~ 344 (391)
+....+..+.. +...+. .+....++. .............. ..-+ +-.++...+.++.+.-+=..
T Consensus 81 sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ 160 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLF 160 (432)
T ss_pred HHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHH
Confidence 22222222222 222111 222222211 11111222222111 1111 22234555666666666667
Q ss_pred HHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHH
Q 016338 345 AAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIF 380 (391)
Q Consensus 345 g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (391)
...++|.+.|.+.+..+ +.....+.++..+++...
T Consensus 161 ckllaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 161 CKLLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999877 777777777777777764
No 282
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.22 E-value=0.06 Score=52.45 Aligned_cols=181 Identities=10% Similarity=0.044 Sum_probs=116.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
+.+..+.....+......++....-+-+++.++++..+.|++.+..-++..+......+...|..|. ..+.
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP---------r~Ig 166 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP---------RWIG 166 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc---------ceee
Confidence 3444433333333333335555555667778999999999999999999999998888888887754 3334
Q ss_pred HHhHhhHHHHHHhhcC------------------------------------------------CchhHHHHHHHHHHHh
Q 016338 280 IGFIGPGVSLLCLNYA------------------------------------------------KSPAVAAVLITIALSL 311 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~~~ 311 (391)
.+.+.++++.++.... .+....+.+++++-..
T Consensus 167 ~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l 246 (735)
T KOG3626|consen 167 IGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLL 246 (735)
T ss_pred echhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHH
Confidence 4555554444433210 0011133344444444
Q ss_pred hhhc----ccchhhhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcc------------------ccchhHHHH
Q 016338 312 SSFS----QAGYLLNIQEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW------------------LGSFQAFLT 368 (391)
Q Consensus 312 ~~~~----~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~------------------~g~~~~~~~ 368 (391)
.+.. ++.-.+++.|... ++.....|+..++..+|=++|=.+++.+... .|.|+..|+
T Consensus 247 ~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFL 326 (735)
T KOG3626|consen 247 LGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFL 326 (735)
T ss_pred hhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHH
Confidence 4433 3334566777666 6788899999988888888877777776532 245777788
Q ss_pred HHHHHHHHHHHHHHHhccCcc
Q 016338 369 VTAGLYFVTTIFWNLYSTGER 389 (391)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~ 389 (391)
+.+.+.+++.+.+++++|+.+
T Consensus 327 i~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 327 ICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHHHhCcccCc
Confidence 888888888888888876543
No 283
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.14 E-value=0.06 Score=48.94 Aligned_cols=115 Identities=17% Similarity=0.090 Sum_probs=82.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhh-hhccchHHHHHHHHHHHhhhhchhhhHH
Q 016338 16 SSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPW-AATHSTASLLAVRAFFGLAEGVAMPAMS 94 (391)
Q Consensus 16 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~-a~~~~~~~~~~~r~l~G~g~~~~~~~~~ 94 (391)
.++..+....|.+|..++..-...+ |+.+-+++.+-..+..+..++.++ -+.++.|..++.-+..|+..|..++-..
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4556677777777766665533221 343333443333333333333322 2347888888999999999999999999
Q ss_pred HHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHH
Q 016338 95 TLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIML 132 (391)
Q Consensus 95 ~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~ 132 (391)
..+.|-.|+++|..++|..+.+-+.|..++..++-.+-
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998876553
No 284
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.13 E-value=0.0074 Score=54.74 Aligned_cols=151 Identities=17% Similarity=0.134 Sum_probs=101.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 016338 201 PSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSI 280 (391)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~ 280 (391)
+........+...+++..=.++.|+|+++ .|.+.+..+.+.....+.+.+.+++.|..+||...|- ..||..+..
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~----GRRRPfI~~ 107 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRY----GRRRPFILA 107 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceeccccccccccccccc----ccccchHHH
Confidence 44455566666777777777999999999 7999999999988888899999999999999864331 115566666
Q ss_pred HhHhhHHHHHHhhcCCch-------------hHHHHHHHHHHHh----hhhcccchhhhhhhccc-cchhH-HHHHHHHH
Q 016338 281 GFIGPGVSLLCLNYAKSP-------------AVAAVLITIALSL----SSFSQAGYLLNIQEIAP-DCAGF-LHGIANSA 341 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~-~~g~~~~~ 341 (391)
+.....+.++++++..+. ...+....++... ........-++..|... +++.+ +++.....
T Consensus 108 ~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f 187 (498)
T KOG0637|consen 108 GSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFF 187 (498)
T ss_pred hhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHH
Confidence 777777777666543211 1222333333322 22334445556666554 55555 88888888
Q ss_pred HHHHHHHHHHHhhHh
Q 016338 342 GTLAAIISTIGTGYF 356 (391)
Q Consensus 342 ~~~g~~i~~~~~g~l 356 (391)
..+|+.+|-.+.++.
T Consensus 188 ~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 188 MAVGNVLGYALGSYL 202 (498)
T ss_pred HHhcceeeeeccccc
Confidence 888888887776643
No 285
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.89 E-value=0.15 Score=47.23 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhhhhhh---hhcCchHHHHHHHHHHHHHHhhhhhhhc----------------cchHHHHHHHHHHHhhh
Q 016338 26 FLWGYIFSSVIGGALV---DKYGGKKVLAWGVALWSLSTLLTPWAAT----------------HSTASLLAVRAFFGLAE 86 (391)
Q Consensus 26 ~~~~~~~~~~~~g~l~---dr~Grr~~~~~~~~~~~~~~~~~~~a~~----------------~~~~~~~~~r~l~G~g~ 86 (391)
..++..++..+.+.+. +|+||++.+.++..+..++.++.-.... +++....+.-++.|++.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 3344455555566665 4679999999999988888877533221 23557778889999999
Q ss_pred hchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHH
Q 016338 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPI 130 (391)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~ 130 (391)
+......+.++++.+ +++|..+.++...-..++..++......
T Consensus 368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999 5888888888887777777666554443
No 286
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.24 E-value=2.3 Score=38.77 Aligned_cols=183 Identities=9% Similarity=-0.001 Sum_probs=91.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
-.++...+........+..+.+-.+.|.++..+.+. +..+.......+.+...+.-.+..|...|...+ -...+.
T Consensus 18 ~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~---~~~~l~ 92 (406)
T KOG1479|consen 18 LVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTR---VGYLLS 92 (406)
T ss_pred cHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 345556666666677778787777767666444444 444444455555555555555555544331000 111111
Q ss_pred HHhHhhH-HHHHHhhcCC-c----hhHHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHh
Q 016338 280 IGFIGPG-VSLLCLNYAK-S----PAVAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGT 353 (391)
Q Consensus 280 ~~~~~~~-~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~ 353 (391)
...+... ...+.....+ . ...............+......+-...+.++|.....++-.+..+.+.+...-..-
T Consensus 93 ~~~il~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~tk 172 (406)
T KOG1479|consen 93 LIAILFIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILTK 172 (406)
T ss_pred HHHHHHHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHHH
Confidence 1111111 1111110111 1 12223334444445556666677777778777766555545544444433333333
Q ss_pred hHhhccccchhHHHHHHHHHHHHHHHHHHHhccC
Q 016338 354 GYFVQWLGSFQAFLTVTAGLYFVTTIFWNLYSTG 387 (391)
Q Consensus 354 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
....|.-.+-...|.+..+..+++.+++...+|.
T Consensus 173 a~~~~~~~sA~~yF~~s~~~~llC~i~y~~l~~l 206 (406)
T KOG1479|consen 173 AAFSDSRTSALIYFITSTVILLLCFVLYLVLPKL 206 (406)
T ss_pred HhcCCCCceeehhHHHHHHHHHHHHHHHHHhhcc
Confidence 3333333335667777778888888887754443
No 287
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.16 E-value=0.0039 Score=59.54 Aligned_cols=165 Identities=12% Similarity=0.033 Sum_probs=1.1
Q ss_pred HHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhh
Q 016338 214 WGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLN 293 (391)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (391)
....++..-.-+-++++++++..++|.+.+..-++..+..++..++.+|.+ |...+..+.++++++.+++.
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~h---------rprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGH---------RPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---------CcceeeecHHHHHHHHHHHh
Confidence 444444444445567779999999999999999999999999999988865 33445566666666655543
Q ss_pred cCC----------------------------------------------chhHHHHHHHHHHHhhhhc----ccchhhhh
Q 016338 294 YAK----------------------------------------------SPAVAAVLITIALSLSSFS----QAGYLLNI 323 (391)
Q Consensus 294 ~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 323 (391)
..+ ........++++-...+.. ++.-.+++
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 210 0001223333333333333 33345567
Q ss_pred hhccc-cchhHHHHHHHHHHHHHHHHHHHHhhHhhcc---------------------ccchhHHHHHHHHHHHHHHHHH
Q 016338 324 QEIAP-DCAGFLHGIANSAGTLAAIISTIGTGYFVQW---------------------LGSFQAFLTVTAGLYFVTTIFW 381 (391)
Q Consensus 324 ~~~~~-~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~---------------------~g~~~~~~~~~~~~~~~~~~~~ 381 (391)
.|..+ ++.+...|+......+|-++|=.+++...+. .|.|...|.+.+.+.++..+.+
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77555 6778888888888877777777777766532 2345566677777777777766
Q ss_pred HHhccC
Q 016338 382 NLYSTG 387 (391)
Q Consensus 382 ~~~~~~ 387 (391)
..++|+
T Consensus 247 ~~FPk~ 252 (539)
T PF03137_consen 247 FFFPKK 252 (539)
T ss_dssp ------
T ss_pred HcCCcc
Confidence 666553
No 288
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=95.06 E-value=1.4 Score=38.75 Aligned_cols=98 Identities=18% Similarity=0.163 Sum_probs=66.5
Q ss_pred HHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcCc--cc
Q 016338 28 WGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPS--HE 105 (391)
Q Consensus 28 ~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~--~~ 105 (391)
+..+.++.+.+.+..++|-|+++.++...+...-... .-+.++.++-+....|++.+..+..--+++++.-.. +.
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N---l~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN---LEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh---cchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 3445566666689999999999999988877655443 237888999999999999998887666666554322 22
Q ss_pred h-------------hhHHHHHHhhhhhhHHHHhhHH
Q 016338 106 R-------------ASAIGICMGGFHLGNVVGLLLT 128 (391)
Q Consensus 106 r-------------g~~~~~~~~~~~lg~~~g~~~~ 128 (391)
| |....+++...-.|..+...+-
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~ 181 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIM 181 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3344455555555555555443
No 289
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.95 E-value=0.3 Score=44.59 Aligned_cols=86 Identities=7% Similarity=-0.104 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHhhhhcccchhhhhhhccc----cchhHHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHH
Q 016338 300 VAAVLITIALSLSSFSQAGYLLNIQEIAP----DCAGFLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYF 375 (391)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~ 375 (391)
...+...+.....+..=+.......|.++ +++.+.........++|..+++...+++.++.| |...|.+..+..+
T Consensus 35 ~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 35 LFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGML 113 (372)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc-hhhhhhHHHHHHH
Confidence 44444444445555666667777766555 346778888899999999999999999999998 9999999999999
Q ss_pred HHHHHHHHhcc
Q 016338 376 VTTIFWNLYST 386 (391)
Q Consensus 376 ~~~~~~~~~~~ 386 (391)
++.+.++.-++
T Consensus 114 ~~~~~f~~~~~ 124 (372)
T PF00854_consen 114 LALIVFLSGRK 124 (372)
T ss_dssp HHHHHHHCCCC
T ss_pred HHHHHHHhCCc
Confidence 99887765543
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.42 E-value=0.01 Score=52.55 Aligned_cols=55 Identities=7% Similarity=0.054 Sum_probs=2.0
Q ss_pred hHHHHHHHHHHHhhhhcccchhhhhhhc-cccchhHHHHHHHHHHHHHHHHHHHHh
Q 016338 299 AVAAVLITIALSLSSFSQAGYLLNIQEI-APDCAGFLHGIANSAGTLAAIISTIGT 353 (391)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~g~~i~~~~~ 353 (391)
+..++..++.+...+......+.+..+. .|++|..+..+....-..|-.+|..+.
T Consensus 249 ~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 249 AWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ------------------HHHH----------------------------------
T ss_pred HHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444455554443 346777776666666666666666543
No 291
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=93.18 E-value=3.2 Score=37.49 Aligned_cols=179 Identities=12% Similarity=0.108 Sum_probs=87.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHH-----HHHhhccchhHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASD-----SLIKAGYSLTLVR 274 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~~~~~~~~~~~~ 274 (391)
+++..+.+.+..+........ -+|..++. .|.|-.+.+.......= .---++...+.| |+||| |
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P--~sLKllWaPiVDs~y~k~~Grr-------k 99 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWP--FSLKLLWAPIVDSVYSKRFGRR-------K 99 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhH--HHHHHHHHhhhHHHHHHhhccc-------c
Confidence 466777777777777766555 88888886 57777666655333211 112345556666 89987 4
Q ss_pred HHHHHHHhHhhHHHHHHhhcCC--------chhHHH--HHHHHHHHhhhhcccchhhh-hhhccccchhHHHHHHHHHHH
Q 016338 275 KIMQSIGFIGPGVSLLCLNYAK--------SPAVAA--VLITIALSLSSFSQAGYLLN-IQEIAPDCAGFLHGIANSAGT 343 (391)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 343 (391)
.++.-.-.++......+....+ .+.... ..+++.-+.....-...... .....|++.|-++........
T Consensus 100 sWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~ 179 (510)
T KOG3574|consen 100 SWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQT 179 (510)
T ss_pred ceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHh
Confidence 4443333333333332222211 111111 12222222222222233332 233445666665555554555
Q ss_pred HHHHHHHHHhhHhhc----------c---cc--chhHHHHHHHHHHHHHHHHHHHhccCcc
Q 016338 344 LAAIISTIGTGYFVQ----------W---LG--SFQAFLTVTAGLYFVTTIFWNLYSTGER 389 (391)
Q Consensus 344 ~g~~i~~~~~g~l~~----------~---~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (391)
.|.+++..+.=.+.. . .| ......++-+...+++..+..+.+++++
T Consensus 180 ~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~ 240 (510)
T KOG3574|consen 180 AGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEND 240 (510)
T ss_pred hhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 555555544322221 0 01 1234455566666666666666666654
No 292
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=93.11 E-value=1.6 Score=37.12 Aligned_cols=38 Identities=8% Similarity=-0.176 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhh----CCCcchhhHHhh
Q 016338 206 IIANITNNWGYFVLLSWMPIYFNTVF----NVNLKQAAWFSA 243 (391)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~ 243 (391)
.+.........++.+..=..|.+++. +-|.....+.++
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs 225 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFS 225 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHH
Confidence 44444444555666555556777753 334444444444
No 293
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.99 E-value=1.3 Score=37.79 Aligned_cols=136 Identities=13% Similarity=0.153 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhcCch--HHHHHHHHHHHHHHhhhhh--hhcc---chHHHHHHHHHHHhhhhchhh
Q 016338 19 LGIVQSSFLWGYIFSSVIGGALVDKYGGK--KVLAWGVALWSLSTLLTPW--AATH---STASLLAVRAFFGLAEGVAMP 91 (391)
Q Consensus 19 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~~~~~~~~~--a~~~---~~~~~~~~r~l~G~g~~~~~~ 91 (391)
-|.+.+.++++.++|+-+..++..|-.+| ..+.+..+.......+.-. ..++ +...-+++-.+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 58999999999999999999998876655 3455544444443333211 1122 122225556666677889999
Q ss_pred hHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 016338 92 AMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (391)
Q Consensus 92 ~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 154 (391)
....+=+++.|++.|...+.+...-.++=..++-..--.-....+=|..|-+......+..+.
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 999999999999999999988765554422222111000001134566777766666554443
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=90.38 E-value=7.1 Score=35.25 Aligned_cols=124 Identities=14% Similarity=0.158 Sum_probs=67.7
Q ss_pred HHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHH------hhhhhhh----ccchHHHHHHHHHHH----hhhhchhhh
Q 016338 27 LWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLST------LLTPWAA----THSTASLLAVRAFFG----LAEGVAMPA 92 (391)
Q Consensus 27 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~------~~~~~a~----~~~~~~~~~~r~l~G----~g~~~~~~~ 92 (391)
.....+..++.|...|+..|+|++...+.+.=++. ++.-+.. +.+++.+...-++.- ++.=.....
T Consensus 73 sgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~ 152 (503)
T KOG2601|consen 73 SGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAG 152 (503)
T ss_pred HhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34456778889999999999998877665432222 2221111 124444443333332 221111111
Q ss_pred HHHHhhhhc----CccchhhHH---HHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHH
Q 016338 93 MSTLTSRWF----PSHERASAI---GICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLL 150 (391)
Q Consensus 93 ~~~~i~~~~----~~~~rg~~~---~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 150 (391)
....-.||. ..+.+.... +.....-.....+.|++.|.+.+..+-|..-...++.+++
T Consensus 153 ~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 153 TILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred eEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 112223443 223343333 4555555666788999999998888878766666655555
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.26 E-value=14 Score=35.82 Aligned_cols=170 Identities=13% Similarity=0.060 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHh
Q 016338 205 VIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIG 284 (391)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~ 284 (391)
....-.+-...+++...-+-.|+.+.++.+...+.-....+........+.+++++|.+-.| -..+.++..+
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gr--------y~tI~~~s~i 113 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGR--------YFTINIGSLI 113 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHH--------HHHHHHHHHH
Confidence 33334445555566666777888888888887777777777777777788999999998653 3333344433
Q ss_pred hHHHHHHhhc-------C-------------Cchh-----HHHHHHHHHHHhhhhcccchhhhhhhccc-----c--chh
Q 016338 285 PGVSLLCLNY-------A-------------KSPA-----VAAVLITIALSLSSFSQAGYLLNIQEIAP-----D--CAG 332 (391)
Q Consensus 285 ~~~~~~~~~~-------~-------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~ 332 (391)
..+++..+.. . +.+. .+.....+.....+..-+.......|-++ + ...
T Consensus 114 ~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~ 193 (571)
T KOG1237|consen 114 SLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIP 193 (571)
T ss_pred HHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcc
Confidence 3333222211 0 0011 11111111111223334445555544333 2 234
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 016338 333 FLHGIANSAGTLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTIFWNL 383 (391)
Q Consensus 333 ~~~g~~~~~~~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 383 (391)
+-+.......+.|..++..+.-++-|+.| |...|.+..+..+++.++++.
T Consensus 194 ~fFnW~yf~~~~g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 194 SFFNWFYFSQNGGALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHc
Confidence 66777778888899999998888888877 888888888888888777654
No 296
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=88.51 E-value=0.17 Score=42.50 Aligned_cols=62 Identities=3% Similarity=0.081 Sum_probs=43.9
Q ss_pred cHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHH
Q 016338 192 SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSG 253 (391)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 253 (391)
++..-+++-.+.-+.+.+.+.-.....-..|+|.|..+.++++.+.-+++-.+..+.....+
T Consensus 193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS 254 (412)
T KOG4830|consen 193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVS 254 (412)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHH
Confidence 44555666677777888888777777788899999888888877766666555555444443
No 297
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=86.26 E-value=15 Score=33.22 Aligned_cols=174 Identities=16% Similarity=0.210 Sum_probs=86.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQS 279 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 279 (391)
+....+...++......-....-...|+.+-.|-|....+.....-+....+-..+.|...|+..|+|...... .+--
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L--~lqN 104 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL--LLQN 104 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH--hhcc
Confidence 33444455666666666666666777777755545555555555555556666777788888888664221111 1111
Q ss_pred HHhHhhHHHHH-HhhcC----CchhHHHHHHHHHHHhhhhcc----cchhhhhhh--------ccccchhHHHHHHHHHH
Q 016338 280 IGFIGPGVSLL-CLNYA----KSPAVAAVLITIALSLSSFSQ----AGYLLNIQE--------IAPDCAGFLHGIANSAG 342 (391)
Q Consensus 280 ~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--------~~~~~~~~~~g~~~~~~ 342 (391)
.+...++.... ++... .+.++...+.++......... ........| -.|+......+.....-
T Consensus 105 lSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iD 184 (503)
T KOG2601|consen 105 LSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGID 184 (503)
T ss_pred HHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhh
Confidence 12222222221 11121 122333333333332222211 111111111 12233334445555566
Q ss_pred HHHHHHHHHHhhHhhccccchhHHHHHHHHHHHH
Q 016338 343 TLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFV 376 (391)
Q Consensus 343 ~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 376 (391)
.....+.|.+.|.+....+ .+..-...++...+
T Consensus 185 q~tn~Lapv~tg~Iitfvs-l~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 185 QSTNLLAPVITGLIITFVS-LRASAGTFAAWALV 217 (503)
T ss_pred hhhhchhhhhhcccceeec-hhhhhhhhHHHHHH
Confidence 6788999999999988766 55544444444444
No 298
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=79.01 E-value=11 Score=33.18 Aligned_cols=65 Identities=18% Similarity=0.042 Sum_probs=54.3
Q ss_pred hhccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHH
Q 016338 67 AATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIM 131 (391)
Q Consensus 67 a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l 131 (391)
.+.++.+...+.-+..|+-.|..++-..--+.+-.++++|..+++.....-++|..++..++-.+
T Consensus 337 ~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 337 WFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 35688888888889999988888887777777777889999999999999999998887776443
No 299
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=77.12 E-value=65 Score=30.24 Aligned_cols=81 Identities=10% Similarity=0.030 Sum_probs=35.4
Q ss_pred HHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhhc---cccchhHHHHHHHHHHHHHHHHH
Q 016338 305 ITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFVQ---WLGSFQAFLTVTAGLYFVTTIFW 381 (391)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~ 381 (391)
..+.+...+........+....+|+..+..+.-....+-++..+--..-....| ...+-...|.+..++.+++.+++
T Consensus 113 v~~~g~~~~~~q~s~~gla~~fp~~~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~ 192 (437)
T TIGR00939 113 VVIINSGMALLQGSLFGLAGVFPSTYSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCY 192 (437)
T ss_pred HHHHHhhhhhhcccchhhcccCCHHHHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 333344455556667777776666544333322222222222221111111122 11113344555556666666665
Q ss_pred HHhc
Q 016338 382 NLYS 385 (391)
Q Consensus 382 ~~~~ 385 (391)
..+.
T Consensus 193 ~~l~ 196 (437)
T TIGR00939 193 LLLP 196 (437)
T ss_pred HHHh
Confidence 5544
No 300
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=76.80 E-value=39 Score=32.58 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=14.1
Q ss_pred CCcchhhHHhhhHHHHHHHHHHHHHHHHHHH
Q 016338 233 VNLKQAAWFSAVPWGTMAVSGYMAGKASDSL 263 (391)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 263 (391)
.++..-|.+.....+..++.+.++|+.+.|+
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3444444444444444444445555544444
No 301
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=72.38 E-value=13 Score=33.42 Aligned_cols=95 Identities=17% Similarity=0.045 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhcCchHH--HHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhchhhhHHHHh
Q 016338 20 GIVQSSFLWGYIFSSVIGGALVDKYGGKKV--LAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGVAMPAMSTLT 97 (391)
Q Consensus 20 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i 97 (391)
|..-++..+..+++.+..|.+--++.|..- +.++.+..+...+++ +.+++.|..+++-++...-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m--~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM--AQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh--hcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 566677778888999999999888777643 444444444444445 5668899888888888777777778888888
Q ss_pred hhhcCccchhhHHHHHHhh
Q 016338 98 SRWFPSHERASAIGICMGG 116 (391)
Q Consensus 98 ~~~~~~~~rg~~~~~~~~~ 116 (391)
++..++|.-|..+|+....
T Consensus 352 A~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHhhhhhhheeeeehHHHH
Confidence 8888878888888876543
No 302
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=72.33 E-value=54 Score=27.03 Aligned_cols=48 Identities=19% Similarity=0.300 Sum_probs=26.4
Q ss_pred hhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHH
Q 016338 99 RWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSL 147 (391)
Q Consensus 99 ~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~ 147 (391)
|+..+|++.+.-.......-++..+|..++..+.+..+.+ ..++.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 3333343333444455556666777777777777777753 33433333
No 303
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=70.88 E-value=33 Score=33.06 Aligned_cols=35 Identities=11% Similarity=-0.019 Sum_probs=27.2
Q ss_pred cchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccc
Q 016338 235 LKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYS 269 (391)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~ 269 (391)
..........+.+.+.+++..++++-..++.+++.
T Consensus 296 g~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~ 330 (521)
T PF02990_consen 296 GSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWK 330 (521)
T ss_pred chHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCcee
Confidence 34455556677788999999999999999887654
No 304
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=68.00 E-value=1.2e+02 Score=29.12 Aligned_cols=34 Identities=9% Similarity=0.043 Sum_probs=28.7
Q ss_pred CCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHh
Q 016338 232 NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIK 265 (391)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~ 265 (391)
-.+.+|+.-.....++++-++.+++|.+...+.+
T Consensus 172 itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 172 ITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888889999999999999999988888776
No 305
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.76 E-value=19 Score=25.79 Aligned_cols=34 Identities=24% Similarity=0.054 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhc-CchHHHHHH
Q 016338 20 GIVQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWG 53 (391)
Q Consensus 20 g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~ 53 (391)
+.=.+.-+++..+.....|++.||| |-++..++.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv 79 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIV 79 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHH
Confidence 3445555666677778889999997 545444433
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.65 E-value=33 Score=24.61 Aligned_cols=48 Identities=21% Similarity=0.254 Sum_probs=33.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhHhhccc-cchhHHHHHHHHHHHH
Q 016338 329 DCAGFLHGIANSAGTLAAIISTIGTGYFVQWL-GSFQAFLTVTAGLYFV 376 (391)
Q Consensus 329 ~~~~~~~g~~~~~~~~g~~i~~~~~g~l~~~~-g~~~~~~~~~~~~~~~ 376 (391)
+.++.+.++-...-.+++.+-....|++.|++ |+-++.+++..++.+.
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 56788888888888889999999999999975 3333444443333333
No 307
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=56.84 E-value=64 Score=26.25 Aligned_cols=30 Identities=17% Similarity=-0.056 Sum_probs=14.2
Q ss_pred hhHHHHHHhhcCchhHHHHHHHHHHHHHHH
Q 016338 125 LLLTPIMLSTIGISGPFILFSSLGLLWLST 154 (391)
Q Consensus 125 ~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~ 154 (391)
+++++.......-.|.....+.+.+...+-
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi~ 72 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGIK 72 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 333444333333344545556666555543
No 308
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=55.77 E-value=1.8e+02 Score=27.32 Aligned_cols=44 Identities=14% Similarity=0.117 Sum_probs=27.0
Q ss_pred ccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHH
Q 016338 103 SHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLW 151 (391)
Q Consensus 103 ~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 151 (391)
+++.+..+++..+..+.|...-|...+. +|-++..+..+++...
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~p~ 62 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAYPI 62 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHHHH
Confidence 4556777888888888877777766543 3444555544444443
No 309
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=55.07 E-value=1.8e+02 Score=27.87 Aligned_cols=63 Identities=8% Similarity=0.048 Sum_probs=46.4
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCch
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGIS 138 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr 138 (391)
++.-++.-+..-..++...+.-++..+|.-=|..|.+.++..++|.---..+.-++.|.+.++
T Consensus 409 I~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~ 471 (544)
T PF13000_consen 409 IIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVA 471 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcccc
Confidence 344555556666677888888899999999999999999999998766555555555555544
No 310
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=54.77 E-value=1.7e+02 Score=26.64 Aligned_cols=87 Identities=17% Similarity=0.222 Sum_probs=58.6
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHH-------HhhhhhhhccchHHHHHHHHHHHhh
Q 016338 13 GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLS-------TLLTPWAATHSTASLLAVRAFFGLA 85 (391)
Q Consensus 13 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~-------~~~~~~a~~~~~~~~~~~r~l~G~g 85 (391)
|-+--|.+.+.+.|.....+|+...-++.|---.-+.+..-.++..++ .+..+.-..++-+.+.+.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 445568899999999999999998888877533332222222222221 1122111234667888889999999
Q ss_pred hhchhhhHHHHhhh
Q 016338 86 EGVAMPAMSTLTSR 99 (391)
Q Consensus 86 ~~~~~~~~~~~i~~ 99 (391)
.|...|..+.++.+
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999999999887
No 311
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=54.75 E-value=4.9 Score=35.62 Aligned_cols=108 Identities=15% Similarity=0.083 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhc-CchHHHHHHH--HHHHHHHhhhhhh--------hccchHHHHHHHHHHHhhhhchh
Q 016338 22 VQSSFLWGYIFSSVIGGALVDKY-GGKKVLAWGV--ALWSLSTLLTPWA--------ATHSTASLLAVRAFFGLAEGVAM 90 (391)
Q Consensus 22 ~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~--~~~~~~~~~~~~a--------~~~~~~~~~~~r~l~G~g~~~~~ 90 (391)
....+.++-.+|....++.-=+. .+|+...... +++.-..++|-.- .-+|-+..++..++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 45577777778877766532111 2444333211 2222222222110 11355677788999999999998
Q ss_pred hhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHH
Q 016338 91 PAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTP 129 (391)
Q Consensus 91 ~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~ 129 (391)
...+.+..+..++++|..+-.+.......|..+|..++-
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp HHHH-----------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988888898888877653
No 312
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=48.42 E-value=2.1e+02 Score=25.85 Aligned_cols=60 Identities=10% Similarity=-0.104 Sum_probs=31.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 200 LPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (391)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 266 (391)
|+++.........+..+.+........-.+ +| ....+. ....-+...+..+.+.+++|.|
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn~~-lg--~~sl~~----~y~~l~~s~m~~~~~Ir~~g~K 88 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVNYD-LG--TVSLGA----LYLSLIDSSMFMPLLIRFLGTK 88 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcC-cc--cchhhh----hhHHHHHHHHHHHHHHHHHhhH
Confidence 346666666666666666655443222111 22 222222 2333445566666889999944
No 313
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=47.96 E-value=57 Score=23.45 Aligned_cols=50 Identities=20% Similarity=0.198 Sum_probs=42.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhh
Q 016338 15 SSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLT 64 (391)
Q Consensus 15 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~ 64 (391)
.++..|-+.+.|.-.+.+.++.+++..|+.-+.+.=.+|..++.+|..+.
T Consensus 52 ~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 52 QPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred CcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 34678899999999999999999999999988888788877777776654
No 314
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=47.51 E-value=2.5e+02 Score=26.45 Aligned_cols=146 Identities=10% Similarity=-0.105 Sum_probs=74.5
Q ss_pred hhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhh-cCchhHHHHHHHHHHHHHHHHhhccccCCCCCCCCChhHHHH
Q 016338 98 SRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLST-IGISGPFILFSSLGLLWLSTWTSKVTNDPCNSPFVSKSELRL 176 (391)
Q Consensus 98 ~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (391)
.|..|+|+|-..........+.-..++....|.+... .+++........-.++..+.....--.-++..-+.
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glpq------- 83 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLPQ------- 83 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCh-------
Confidence 4567777775555665555555555555555554433 56665555433333333332222211111111100
Q ss_pred HHcCCCcccccCCCccHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCcchhhHHhhhHHHHHHHHHHHH
Q 016338 177 IQAGKSDSVKKRNPPSLRHLLSKLPSWTVIIANITNNWGYFVLLSWMPIYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMA 256 (391)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 256 (391)
....|..+-.+.-+...+.......++++++.++.-.... .. +.........+.++...+..+.+
T Consensus 84 -------------mi~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~-~~-~~~~~~~~ili~g~l~~l~~ifG 148 (442)
T COG1457 84 -------------MILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG-SG-TGLPVWAGILIIGVLMTLVTIFG 148 (442)
T ss_pred -------------heeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc-cC-CCCcHHHHHHHHHHHHHHHHHHh
Confidence 0011223334444566666667777788777776554422 11 33344444555566677777777
Q ss_pred HHHHHHHHh
Q 016338 257 GKASDSLIK 265 (391)
Q Consensus 257 g~l~dr~~~ 265 (391)
-+..+++.|
T Consensus 149 ~r~l~~l~~ 157 (442)
T COG1457 149 YRALHKLER 157 (442)
T ss_pred HHHHHHHHH
Confidence 777777763
No 315
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate. The protein is located in the inner membrane.; GO: 0015501 glutamate:sodium symporter activity, 0015813 L-glutamate transport, 0016021 integral to membrane
Probab=47.33 E-value=2.3e+02 Score=25.97 Aligned_cols=22 Identities=14% Similarity=0.066 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q 016338 246 WGTMAVSGYMAGKASDSLIKAG 267 (391)
Q Consensus 246 ~~~~~~~~~~~g~l~dr~~~~~ 267 (391)
.+...++..+.-.+.||.+..+
T Consensus 250 f~~ami~g~ivrn~~~~~~~~~ 271 (368)
T PF03616_consen 250 FVGAMIVGIIVRNILDKTGKYK 271 (368)
T ss_pred HHHHHHHHHHHHHHHHHhCccc
Confidence 3445566666677778776554
No 316
>COG4769 Predicted membrane protein [Function unknown]
Probab=46.94 E-value=27 Score=27.27 Aligned_cols=52 Identities=15% Similarity=0.157 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHh
Q 016338 25 SFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGL 84 (391)
Q Consensus 25 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~ 84 (391)
+++...++.+...-++..++|+|..-.++.-.. . ++.+|..++.+.+++.+-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------G--aF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------G--AFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------H--HHHHhHHHHHHHHHHHhc
Confidence 344555666677778888999888754443322 2 234888888888877764
No 317
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=43.03 E-value=21 Score=29.76 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=37.0
Q ss_pred HHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHH
Q 016338 76 LAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPI 130 (391)
Q Consensus 76 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~ 130 (391)
...-.-.|+|.+..+..+..-+.+.+| +......++.....-+....|-.+.-+
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455688888888888888888886 566667777666666666665554433
No 318
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=42.44 E-value=2.4e+02 Score=24.76 Aligned_cols=88 Identities=15% Similarity=0.066 Sum_probs=48.3
Q ss_pred HHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCc--hh--HHHHHHHHHHH
Q 016338 75 LLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGI--SG--PFILFSSLGLL 150 (391)
Q Consensus 75 ~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gw--r~--~f~~~~~~~~~ 150 (391)
--..|.+.|+-.= .+...+++++-.||++++-...--.....+++.++-|++|-. .+...| |. .....+.+.++
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~-l~~~~~~i~~~~i~~~l~~~t~~ 99 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLL-LNYTPWGIRLIPILISLSIFTLV 99 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHH-HHhccCCcchhHHHHHHHHHHHH
Confidence 4567888887653 346789999999986654433333344555555666655544 343333 32 23334445555
Q ss_pred HHHHHhhccccCCC
Q 016338 151 WLSTWTSKVTNDPC 164 (391)
Q Consensus 151 ~~~~~~~~~~~~~~ 164 (391)
..++......+.|+
T Consensus 100 ~~~~a~~rr~~~~~ 113 (287)
T PF07760_consen 100 LSIIAYIRRRRLPE 113 (287)
T ss_pred HHHHHHHhcccCCc
Confidence 55544444333333
No 319
>PRK02237 hypothetical protein; Provisional
Probab=42.26 E-value=95 Score=22.43 Aligned_cols=48 Identities=17% Similarity=0.091 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhh
Q 016338 17 SFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLT 64 (391)
Q Consensus 17 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~ 64 (391)
++.|-+.+.|.-.+.+.++.+++..|+.-+-+.=.+|..++.+|..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 558999999999999999999999999988777777777777766554
No 320
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.64 E-value=50 Score=30.62 Aligned_cols=27 Identities=11% Similarity=-0.026 Sum_probs=13.1
Q ss_pred HHhhhHHHHHHHHHHHHHHH----HHHHHhh
Q 016338 240 WFSAVPWGTMAVSGYMAGKA----SDSLIKA 266 (391)
Q Consensus 240 ~~~~~~~~~~~~~~~~~g~l----~dr~~~~ 266 (391)
-+.+...+.-++.+++.|+. -.|.|.|
T Consensus 327 al~saaI~vYAlTs~i~GY~~gs~Y~r~gG~ 357 (593)
T KOG1277|consen 327 ALLSAAIVVYALTSPINGYVSGSFYARLGGR 357 (593)
T ss_pred HHHHHHHHHHHhcccccccccceeeehhccH
Confidence 33344444455555555554 4455544
No 321
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=41.49 E-value=98 Score=24.11 Aligned_cols=82 Identities=16% Similarity=0.117 Sum_probs=48.4
Q ss_pred hhhhhcCchHHHHHHHHH------HHHHHhhhhh--hhccchHHHHHHHHHHHhhhhchhhhHHHHhhhhcCccchhhHH
Q 016338 39 ALVDKYGGKKVLAWGVAL------WSLSTLLTPW--AATHSTASLLAVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAI 110 (391)
Q Consensus 39 ~l~dr~Grr~~~~~~~~~------~~~~~~~~~~--a~~~~~~~~~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~ 110 (391)
..+||.-||-.+..|.=. +.+...+..- .-.+++..++..-.+.|+|.- ...+.+++--.++++.|..+
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSll 132 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLL 132 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcc
Confidence 457787666555444322 1222211100 012556666766666666543 45667777677778899999
Q ss_pred HHHHhhhhhhHHH
Q 016338 111 GICMGGFHLGNVV 123 (391)
Q Consensus 111 ~~~~~~~~lg~~~ 123 (391)
|+-..-.+++-+.
T Consensus 133 G~~e~~~N~~r~~ 145 (153)
T PF11947_consen 133 GWEEFKRNWGRMW 145 (153)
T ss_pred cHHHHHHhHHHHH
Confidence 9988887776543
No 322
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=40.79 E-value=2.2e+02 Score=26.49 Aligned_cols=51 Identities=16% Similarity=0.092 Sum_probs=30.1
Q ss_pred HHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHH
Q 016338 78 VRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (391)
Q Consensus 78 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~ 128 (391)
.-++.|+..|........++.+..+-++--.+.++.....-+|.+..+++.
T Consensus 281 ~A~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 281 GAIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 344555555555445555455655555555577777777777766666554
No 323
>PRK10263 DNA translocase FtsK; Provisional
Probab=40.62 E-value=5.1e+02 Score=28.37 Aligned_cols=36 Identities=6% Similarity=-0.046 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhHhhccccchhHHHHHHHHHHHHHHH
Q 016338 343 TLAAIISTIGTGYFVQWLGSFQAFLTVTAGLYFVTTI 379 (391)
Q Consensus 343 ~~g~~i~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 379 (391)
..|+++|..+...+...+| .....++..++.++++.
T Consensus 141 ~gGGIIG~lLs~lL~~LfG-~vGa~LILLlllLIGLi 176 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLH-SSGGTIALLCVWAAGLT 176 (1355)
T ss_pred cccchHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHH
Confidence 3477777777777777666 33444444444444443
No 324
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=40.27 E-value=2.2e+02 Score=26.49 Aligned_cols=48 Identities=17% Similarity=0.113 Sum_probs=26.8
Q ss_pred HHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHH
Q 016338 80 AFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (391)
Q Consensus 80 ~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~ 128 (391)
++.|+-.+........++ |..+-++---+.++.....-.|.+..+++.
T Consensus 297 ~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 344444444434444444 445555556677777777777766666554
No 325
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=39.47 E-value=2.3e+02 Score=24.75 Aligned_cols=24 Identities=21% Similarity=0.166 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHhhccccCCC
Q 016338 141 FILFSSLGLLWLSTWTSKVTNDPC 164 (391)
Q Consensus 141 f~~~~~~~~~~~~~~~~~~~~~~~ 164 (391)
+.+.++...+..++++.+.|..|.
T Consensus 78 ~~~Gglwy~~lsl~~~~l~p~r~~ 101 (284)
T PF12805_consen 78 FLAGGLWYLLLSLLWWPLRPYRPV 101 (284)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHH
Confidence 444555566666666666666554
No 326
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=39.43 E-value=44 Score=24.11 Aligned_cols=31 Identities=16% Similarity=0.114 Sum_probs=24.2
Q ss_pred hhcCchhHHHHHHHHHHHHHHHHhhccccCC
Q 016338 133 STIGISGPFILFSSLGLLWLSTWTSKVTNDP 163 (391)
Q Consensus 133 ~~~gwr~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (391)
+..+|+.+|++...++++...+.+.+.||..
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 5668999999988888777777777777654
No 327
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=39.02 E-value=2.3e+02 Score=23.68 Aligned_cols=33 Identities=21% Similarity=0.347 Sum_probs=16.3
Q ss_pred hhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHH
Q 016338 118 HLGNVVGLLLTPIMLSTIGISGPFILFSSLGLL 150 (391)
Q Consensus 118 ~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~ 150 (391)
..+..+|..++.++....+-+..-...++..+.
T Consensus 70 ~~~~~~g~~iG~~l~~~l~~~~l~~~~~~~ll~ 102 (240)
T PF01925_consen 70 IIGALIGVVIGAWLLSLLPDDILKLIFGLFLLL 102 (240)
T ss_pred hhHhHHHHHHHHhhhcchhHHHHHHHHHHHHHH
Confidence 455566666666665544433333333433333
No 328
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=38.72 E-value=2.6e+02 Score=24.17 Aligned_cols=66 Identities=20% Similarity=0.281 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhh-cCchHHHH----HHHHHHHHHHhhhhhhhc--c--chHHHHHHHHHHHhhh
Q 016338 20 GIVQSSFLWGYIFSSVIGGALVDK-YGGKKVLA----WGVALWSLSTLLTPWAAT--H--STASLLAVRAFFGLAE 86 (391)
Q Consensus 20 g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~----~~~~~~~~~~~~~~~a~~--~--~~~~~~~~r~l~G~g~ 86 (391)
....-.+..+..+|....|++... +.||+.+. .+.++..+..+. +.... + ++..+++.-++.|+..
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 344455666666777777877764 45555443 233333443333 21111 1 3667788888888765
No 329
>PF03706 UPF0104: Uncharacterised protein family (UPF0104); InterPro: IPR022791 This family of proteins are integral membrane proteins. These proteins are uncharacterised but contain a conserved PG motif. Some members of this family are annotated as dolichol-P-glucose synthetase and contain a PF00535 from PFAM domain. This entry also contains proteins of unknown function that are involved in the addition of lysine to phosphatidylglycerol (lysylphosphatidylglycerol synthetase, L-PG synthase). L-PG synthase produces lysyl-phosphatidylglycerol (L-PG), the major component of the bacterial membrane and responsible for its positive charge. L-PG synthesis contributes to bacterial virulence as it is involved in the cationic antimicrobial peptides (CAMP) resistance mechanism of the host's immune system (defensins, cathelicidins) and of the competing microorganisms (bacteriocins).
Probab=38.29 E-value=2.6e+02 Score=24.14 Aligned_cols=57 Identities=12% Similarity=0.112 Sum_probs=39.4
Q ss_pred hHHHHh-CCChhhHHHHHHHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhh
Q 016338 7 PLAAKF-GWSSSFLGIVQSSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLL 63 (391)
Q Consensus 7 ~i~~~~-~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~ 63 (391)
++.+++ +.|...+........+.+.+-..-+-.+.++.|.|..+.-..-....+...
T Consensus 16 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 73 (294)
T PF03706_consen 16 ELWDALRSANPWWLLLALLLSLLSYVLRALRWRLLLRRLGHRISFRDALRISFIGFFL 73 (294)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 344444 566777777777888888888888888888888776666555555554444
No 330
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=36.85 E-value=1.8e+02 Score=26.92 Aligned_cols=52 Identities=12% Similarity=0.044 Sum_probs=30.4
Q ss_pred HHHHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHH
Q 016338 77 AVRAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (391)
Q Consensus 77 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~ 128 (391)
..-++.|+..|.........+.+..+-++--.+.++.....-.|.+..+++.
T Consensus 275 ~~A~~iG~iag~i~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 326 (399)
T PF00909_consen 275 WGALLIGAIAGLISYFGVSWLLKRLKIDDPVGAFAVHGVGGIWGTILTGLFA 326 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTS-HTTGHHHHCHHHHHHHHHHHHHHC
T ss_pred HHHHHhhhhHhhhhhhheecccceeEeccccceEeeeeccHHHHHHHHHHHh
Confidence 3445555555554444444566666566666778887777766666665543
No 331
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=34.05 E-value=3e+02 Score=23.47 Aligned_cols=22 Identities=14% Similarity=0.298 Sum_probs=11.5
Q ss_pred hhHHHHHHhhhhhhHHHHhhHH
Q 016338 107 ASAIGICMGGFHLGNVVGLLLT 128 (391)
Q Consensus 107 g~~~~~~~~~~~lg~~~g~~~~ 128 (391)
.+.....-.+.-+|.++|...+
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~ 30 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIG 30 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555555444
No 332
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=33.85 E-value=1.1e+02 Score=18.36 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=16.9
Q ss_pred HHHhhHHHHHHhhcCc----hhHHHHHHHHHHHHHHHHh
Q 016338 122 VVGLLLTPIMLSTIGI----SGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 122 ~~g~~~~~~l~~~~gw----r~~f~~~~~~~~~~~~~~~ 156 (391)
.+|..+++++.+.+++ .+.=++.+++..+..+..+
T Consensus 5 iiGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 5 IIGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred hHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 3445555555544433 4444455555555444433
No 333
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=33.44 E-value=3.8e+02 Score=24.53 Aligned_cols=131 Identities=14% Similarity=0.093 Sum_probs=58.7
Q ss_pred HHHHhhhCCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhH---HHHHHhhcCC--chh
Q 016338 225 IYFNTVFNVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPG---VSLLCLNYAK--SPA 299 (391)
Q Consensus 225 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~ 299 (391)
.....-.|-+..+.+.+.+.+...+.+|+.+.-++.|.--..+. -..=+..++++.. +..+.+.... ..+
T Consensus 32 tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~F-----v~vElllgligg~Sa~~ly~~FA~~~~~~~~ 106 (508)
T COG4262 32 TLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARF-----VDVELLLGLIGGVSAAALYLLFALESAPSRL 106 (508)
T ss_pred HHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHH-----HHHHHHHHHhccchHHHHHHHHHhccchHHH
Confidence 33333355566666777666666666666665555443221000 0011122222221 2222222222 334
Q ss_pred HHHHHHHHHHHhhhhcccchhhhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhHhh-cccc
Q 016338 300 VAAVLITIALSLSSFSQAGYLLNIQEIAPDCAGFLHGIANSAGTLAAIISTIGTGYFV-QWLG 361 (391)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~~~~~g~l~-~~~g 361 (391)
.........+...+.-.|..+.+.+.-..+.+-.. +.....-++|+..+....+++. -+.|
T Consensus 107 Vly~lt~vIG~LVG~EiPL~mrml~~r~a~~k~~~-s~vl~~DYLGal~~gLl~p~lllP~LG 168 (508)
T COG4262 107 VLYALTAVIGVLVGAEIPLLMRMLQRRQAKAKDLG-SRVLTLDYLGALAGGLLWPFLLLPRLG 168 (508)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhhh-hhhhhhHhhhhhhHHHHHHHHHhhhhc
Confidence 44444444555555555655555554111222222 2222336677777777776654 3445
No 334
>PF02667 SCFA_trans: Short chain fatty acid transporter; InterPro: IPR006160 Members of this family may be short chain fatty acid transporters although there has been no experimental characterisation of this function.
Probab=32.69 E-value=2.7e+02 Score=26.18 Aligned_cols=18 Identities=11% Similarity=0.110 Sum_probs=9.0
Q ss_pred CccHHHhhcCCchHHHHH
Q 016338 190 PPSLRHLLSKLPSWTVII 207 (391)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~ 207 (391)
..+..|-+.+.+.+...+
T Consensus 241 ~~tpae~le~S~~l~~li 258 (453)
T PF02667_consen 241 RATPAERLENSRILSLLI 258 (453)
T ss_pred cCCHHHHHhccHHHHHHH
Confidence 334555555555544433
No 335
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=32.49 E-value=5e+02 Score=26.34 Aligned_cols=54 Identities=15% Similarity=0.089 Sum_probs=33.6
Q ss_pred HHhhhhhhhh----cCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhc
Q 016338 34 SVIGGALVDK----YGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (391)
Q Consensus 34 ~~~~g~l~dr----~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~ 88 (391)
+.+.+-++|. -||.+-+.++.+++.++++...+. .+..+.+...-++..++.++
T Consensus 40 G~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll-~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 40 GIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELL-FGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH-hcCcHHHHHHHHHHHHHHHH
Confidence 3445666664 356677788888888888776543 35555556555555555443
No 336
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=32.22 E-value=3.5e+02 Score=23.71 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=17.9
Q ss_pred cHHHhhcCCchHHHHHHHHHHHHHHHHHHHhhH
Q 016338 192 SLRHLLSKLPSWTVIIANITNNWGYFVLLSWMP 224 (391)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (391)
..+++.|+|+.+..................|.|
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 456677888766655554444434333434433
No 337
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=32.20 E-value=2.7e+02 Score=22.47 Aligned_cols=59 Identities=14% Similarity=0.144 Sum_probs=30.8
Q ss_pred hchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHH
Q 016338 87 GVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSL 147 (391)
Q Consensus 87 ~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~ 147 (391)
+.-.....+++.+..|+++|.++.-+=-.+.-+--.+.-..+.++.+. |++..++.|+.
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 445566677788889987777665332222222223333344555554 34455554433
No 338
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.87 E-value=32 Score=32.66 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=22.5
Q ss_pred CCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHH
Q 016338 232 NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLI 264 (391)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~ 264 (391)
-++++.-|-+++...+..++.++++|+.+.|+-
T Consensus 355 flSPs~RGsLmT~~~~l~v~~G~~agY~s~rly 387 (628)
T KOG1278|consen 355 FLSPSSRGSLMTAMVLLFVFMGFVAGYVSARLY 387 (628)
T ss_pred cCCccccccHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 356777676766666666677777777777764
No 339
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=30.37 E-value=1.8e+02 Score=23.49 Aligned_cols=23 Identities=26% Similarity=0.551 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhcCc
Q 016338 24 SSFLWGYIFSSVIGGALVDKYGG 46 (391)
Q Consensus 24 s~~~~~~~~~~~~~g~l~dr~Gr 46 (391)
.-|.+++.+.+.+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 35678888999999999999875
No 340
>PRK10720 uracil transporter; Provisional
Probab=30.32 E-value=4.6e+02 Score=24.63 Aligned_cols=19 Identities=11% Similarity=-0.108 Sum_probs=8.5
Q ss_pred cCchHHHHHHHHHHHHHHh
Q 016338 44 YGGKKVLAWGVALWSLSTL 62 (391)
Q Consensus 44 ~Grr~~~~~~~~~~~~~~~ 62 (391)
...|++..++..+..+..+
T Consensus 299 v~sr~v~~~a~~~li~lg~ 317 (428)
T PRK10720 299 VYSTWVIGGAAIIAILLSC 317 (428)
T ss_pred cchhHHHHHHHHHHHHHHH
Confidence 3345555544444433333
No 341
>PRK15049 L-asparagine permease; Provisional
Probab=30.18 E-value=5e+02 Score=24.91 Aligned_cols=20 Identities=15% Similarity=0.363 Sum_probs=10.3
Q ss_pred CchhHHHHHHHHHHHHHHHH
Q 016338 136 GISGPFILFSSLGLLWLSTW 155 (391)
Q Consensus 136 gwr~~f~~~~~~~~~~~~~~ 155 (391)
+.|+...+.....++..+.+
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~ 465 (499)
T PRK15049 446 NGTYTIAALPIIGILLVIGW 465 (499)
T ss_pred chHHHHHHHHHHHHHHHHHH
Confidence 35666666555444444433
No 342
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=29.15 E-value=6.2e+02 Score=25.67 Aligned_cols=55 Identities=15% Similarity=0.103 Sum_probs=34.7
Q ss_pred HHHhhhhhhhhc----CchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHHHHhhhhc
Q 016338 33 SSVIGGALVDKY----GGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAFFGLAEGV 88 (391)
Q Consensus 33 ~~~~~g~l~dr~----Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l~G~g~~~ 88 (391)
...+.+-+.|.= ||.+-+.++..+++++++...+. .+..+.+...-++.+++.++
T Consensus 39 lG~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll-~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 39 LGIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLL-FPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HhhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHH-hcchHHHHHHHHHHHHHHHH
Confidence 344555666643 55788888888888888877544 24555555555555555443
No 343
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=28.81 E-value=1.4e+02 Score=23.09 Aligned_cols=25 Identities=20% Similarity=0.526 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhcCchH
Q 016338 24 SSFLWGYIFSSVIGGALVDKYGGKK 48 (391)
Q Consensus 24 s~~~~~~~~~~~~~g~l~dr~Grr~ 48 (391)
.-|.+++.+.+.+.|++.||..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 3466778888888888888887764
No 344
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=28.45 E-value=1.6e+02 Score=18.51 Aligned_cols=40 Identities=23% Similarity=0.331 Sum_probs=22.6
Q ss_pred hhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHHHHHHh
Q 016338 117 FHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 117 ~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 156 (391)
.-+|.+++...+......++++....+..+.+++...+..
T Consensus 11 ~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~ 50 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIA 50 (57)
T ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3455566655555544556777666665555555554444
No 345
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=28.32 E-value=1.7e+02 Score=20.02 Aligned_cols=20 Identities=5% Similarity=-0.052 Sum_probs=12.0
Q ss_pred hhHHHHHHHHHHHHHHHHhh
Q 016338 138 SGPFILFSSLGLLWLSTWTS 157 (391)
Q Consensus 138 r~~f~~~~~~~~~~~~~~~~ 157 (391)
|+-.++.++.-++.++.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 55666667666665554444
No 346
>PRK10666 ammonium transporter; Provisional
Probab=28.29 E-value=5.1e+02 Score=24.37 Aligned_cols=50 Identities=16% Similarity=0.246 Sum_probs=27.2
Q ss_pred HHHHHhhhhchhhhHHHHhhhhcCccchhhHHHHHHhhhhhhHHHHhhHH
Q 016338 79 RAFFGLAEGVAMPAMSTLTSRWFPSHERASAIGICMGGFHLGNVVGLLLT 128 (391)
Q Consensus 79 r~l~G~g~~~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~lg~~~g~~~~ 128 (391)
-++.|+-.|........++.+.+.-++---+.++.....-+|.+..+++.
T Consensus 306 A~iiG~vag~v~~~~~~~l~~~~~iDD~~~a~~vHgv~Gi~G~l~~glfa 355 (428)
T PRK10666 306 ALIIGVVAGLAGLWGVTMLKRWLRVDDPCDVFGVHGVCGIVGCILTGIFA 355 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCcCccHhhhHhHHHHHHHHHHhh
Confidence 34445444444344444555444445555566777666666666655554
No 347
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=26.65 E-value=1.5e+02 Score=18.82 Aligned_cols=33 Identities=15% Similarity=0.331 Sum_probs=17.0
Q ss_pred HHhhcC-----chhHHHHHHHH---HHHHHHHHhhccccCC
Q 016338 131 MLSTIG-----ISGPFILFSSL---GLLWLSTWTSKVTNDP 163 (391)
Q Consensus 131 l~~~~g-----wr~~f~~~~~~---~~~~~~~~~~~~~~~~ 163 (391)
+++++| +|..|.+.... .++.-+..+..+|+.|
T Consensus 20 lA~~~gid~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 20 LAEYFGIDPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 345555 35566655543 2333344455667655
No 348
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=26.43 E-value=3.3e+02 Score=21.61 Aligned_cols=57 Identities=16% Similarity=0.137 Sum_probs=29.6
Q ss_pred hcCccchhhHHHHHHhhhhhhHHHHhhHHHHHHhhc------CchhHHHHHHHHHHHHHHHHh
Q 016338 100 WFPSHERASAIGICMGGFHLGNVVGLLLTPIMLSTI------GISGPFILFSSLGLLWLSTWT 156 (391)
Q Consensus 100 ~~~~~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~------gwr~~f~~~~~~~~~~~~~~~ 156 (391)
.+|.+++.+..+.+.++.-.+...--.+=+.+.+.. .+...+++.++.+.+..+..-
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN 76 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVN 76 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhc
Confidence 445555555555544443333322222323232222 467778888888877666544
No 349
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=26.18 E-value=4.3e+02 Score=22.81 Aligned_cols=13 Identities=23% Similarity=0.271 Sum_probs=6.6
Q ss_pred hhHHHHHHHHHHH
Q 016338 138 SGPFILFSSLGLL 150 (391)
Q Consensus 138 r~~f~~~~~~~~~ 150 (391)
++..++..++-++
T Consensus 130 ~~T~~~~t~LF~i 142 (294)
T KOG2881|consen 130 KYTYYLATALFLI 142 (294)
T ss_pred HHHHHHHHHHHHH
Confidence 4555555554444
No 350
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=26.08 E-value=1.8e+02 Score=19.46 Aligned_cols=37 Identities=8% Similarity=0.173 Sum_probs=18.2
Q ss_pred HHHhhhhhhHHHHhhHHHHHHhhcCchhHHHHHHHHHHHH
Q 016338 112 ICMGGFHLGNVVGLLLTPIMLSTIGISGPFILFSSLGLLW 151 (391)
Q Consensus 112 ~~~~~~~lg~~~g~~~~~~l~~~~gwr~~f~~~~~~~~~~ 151 (391)
+.+....++.+++-..| ++.+. .+..+++.++-.++.
T Consensus 12 l~~~il~~~~iisfi~G-y~~q~--~~~~~~~~~~g~~~~ 48 (76)
T PF06645_consen 12 LMQYILIISAIISFIVG-YITQS--FSYTFYIYGAGVVLT 48 (76)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHHHH
Confidence 44445555555655444 44443 355555555444443
No 351
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=24.91 E-value=3.5e+02 Score=21.43 Aligned_cols=37 Identities=8% Similarity=-0.026 Sum_probs=20.0
Q ss_pred cchhhHHHHh-CCC------hhhHHHHHHHHHHHHHHHHHhhhh
Q 016338 3 VAVVPLAAKF-GWS------SSFLGIVQSSFLWGYIFSSVIGGA 39 (391)
Q Consensus 3 ~~~~~i~~~~-~~s------~~~~g~~~s~~~~~~~~~~~~~g~ 39 (391)
|-.|.+..|+ |++ .+...|.-....+..+..+...|.
T Consensus 40 PNApY~lTDliHL~~~~~~~~~~~~W~~~~~l~~~~~~gll~G~ 83 (168)
T PF07099_consen 40 PNAPYMLTDLIHLSFNGIYRQNPPIWFDFLLLLSFALFGLLLGF 83 (168)
T ss_pred CCchHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 4556766665 555 334455555555555555555553
No 352
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=24.48 E-value=1.2e+02 Score=21.84 Aligned_cols=31 Identities=16% Similarity=0.063 Sum_probs=26.9
Q ss_pred chhhHHhhhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (391)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 266 (391)
...|-..+.++...++.+++.++..|+....
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd 84 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPD 84 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCC
Confidence 5678888899999999999999999998755
No 353
>COG3162 Predicted membrane protein [Function unknown]
Probab=24.17 E-value=2.7e+02 Score=19.80 Aligned_cols=39 Identities=18% Similarity=0.395 Sum_probs=28.3
Q ss_pred cHHHhhcCC--chHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 016338 192 SLRHLLSKL--PSWTVIIANITNNWGYFVLLSWMPIYFNTV 230 (391)
Q Consensus 192 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (391)
.++++.++| -.|...+..+..++.+..+..+.|.++...
T Consensus 14 ~f~eLv~kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l~tp 54 (102)
T COG3162 14 RFRELVRKRRRFAVPLTLIFLVVYFGFILLIAFAPGWLATP 54 (102)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcCc
Confidence 456666544 356677888888888888888888777653
No 354
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=24.13 E-value=3.8e+02 Score=21.45 Aligned_cols=18 Identities=6% Similarity=-0.119 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 016338 248 TMAVSGYMAGKASDSLIK 265 (391)
Q Consensus 248 ~~~~~~~~~g~l~dr~~~ 265 (391)
+....-...+...+|.++
T Consensus 145 ~~~~w~~~~~~~~~~~~~ 162 (191)
T PF01810_consen 145 GSLLWFLLLALLGSRLRR 162 (191)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333444444444443
No 355
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=24.10 E-value=3.7e+02 Score=22.36 Aligned_cols=56 Identities=14% Similarity=0.180 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHhHhhHHHHHHhhcCCchhHHHHHHHHHHHhh
Q 016338 248 TMAVSGYMAGKASDSLIKAGYSLTLVRKIMQSIGFIGPGVSLLCLNYAKSPAVAAVLITIALSLS 312 (391)
Q Consensus 248 ~~~~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (391)
++++|..+..++.||+. +......++....++.-.....++........+.+...+
T Consensus 15 G~iiG~l~~~klper~k---------~~l~~~~Gl~~l~iGI~m~~~~~n~~~~ilslv~G~vIG 70 (228)
T COG1811 15 GGIIGLLIGKKLPERIK---------DILMQCLGLAILGIGIKMALQAKNDIMILLALVIGAVIG 70 (228)
T ss_pred HHHHHHHHcccCcHHHH---------HHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH
Confidence 34444444444555554 344555566556666555555566655555555554443
No 356
>COG3619 Predicted membrane protein [Function unknown]
Probab=22.53 E-value=4.7e+02 Score=22.02 Aligned_cols=121 Identities=9% Similarity=0.096 Sum_probs=55.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhhcCc-hHHHHH--HHHHHHHHHhhhhhh--hccchHHHHHHHHHHH-------
Q 016338 16 SSFLGIVQSSFLWGYIFSSVIGGALVDKYGG-KKVLAW--GVALWSLSTLLTPWA--ATHSTASLLAVRAFFG------- 83 (391)
Q Consensus 16 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~--~~~~~~~~~~~~~~a--~~~~~~~~~~~r~l~G------- 83 (391)
+...........+..+++......+..|..| ...... ..++........++. .+++....+..-+.+|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~ 133 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFR 133 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 4455666667777777776555555555554 222222 222222222222211 1234444444444444
Q ss_pred ----hhhhchhhhHH-----HHhhhhcCccc-hhhHHHHHHhhhhhhHHHHhhHHHHHHhhcC
Q 016338 84 ----LAEGVAMPAMS-----TLTSRWFPSHE-RASAIGICMGGFHLGNVVGLLLTPIMLSTIG 136 (391)
Q Consensus 84 ----~g~~~~~~~~~-----~~i~~~~~~~~-rg~~~~~~~~~~~lg~~~g~~~~~~l~~~~g 136 (391)
...+..+.+.+ .-+.+++..|+ .-..-...+...-++..+|...++.+...+|
T Consensus 134 k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 134 KVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222111 12445554432 2223344455566667777777777766555
No 357
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=22.40 E-value=1.7e+02 Score=18.46 Aligned_cols=24 Identities=13% Similarity=0.117 Sum_probs=18.0
Q ss_pred CchhHHHHHHHHHHHHHHHHhhcc
Q 016338 136 GISGPFILFSSLGLLWLSTWTSKV 159 (391)
Q Consensus 136 gwr~~f~~~~~~~~~~~~~~~~~~ 159 (391)
|||....+.+.++++.+.+.-...
T Consensus 4 g~r~~~~~ggfVg~iG~a~Ypi~~ 27 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALYPIYF 27 (58)
T ss_pred cccchhhHHHHHHHHHHHHhhhhc
Confidence 799999998888888666554443
No 358
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=22.20 E-value=2e+02 Score=17.58 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHhhhhhhhh-cCchHHHHHHHHHHH
Q 016338 25 SFLWGYIFSSVIGGALVDK-YGGKKVLAWGVALWS 58 (391)
Q Consensus 25 ~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~ 58 (391)
.......+.....|+..|+ ++.++...+..++..
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 3344455566777888886 476555544444333
No 359
>TIGR02978 phageshock_pspC phage shock protein C. All members of this protein family are the phage shock protein PspC. These proteins contain a PspC domain, as do other members of the larger family of proteins described by Pfam model pfam04024. The phage shock regulon is restricted to the Proteobacteria and somewhat sparsely distributed there. It is expressed, under positive control of a sigma-54-dependent transcription factor, PspF, which binds and is modulated by PspA. Stresses that induce the psp regulon include phage secretin overexpression, ethanol, heat shock, and protein export defects.
Probab=22.04 E-value=2.4e+02 Score=21.01 Aligned_cols=35 Identities=14% Similarity=0.127 Sum_probs=17.1
Q ss_pred HHhhcCc-----hhHHHHHHHHH-----HHHHHHHhhccccCCCC
Q 016338 131 MLSTIGI-----SGPFILFSSLG-----LLWLSTWTSKVTNDPCN 165 (391)
Q Consensus 131 l~~~~gw-----r~~f~~~~~~~-----~~~~~~~~~~~~~~~~~ 165 (391)
+++++|| |..|.+..+++ ++.-++.++.+|+.|..
T Consensus 20 lA~y~gi~~~~VRl~~vl~~~~~~~~~~ll~Y~i~w~~lp~~p~~ 64 (121)
T TIGR02978 20 LADYFGVEVWLVRILVVSALLFGGGFFVLVAYIALWLLLDKKPIN 64 (121)
T ss_pred HHHHHCcCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCccc
Confidence 4455664 44554433332 22233455666776654
No 360
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=21.91 E-value=6.2e+02 Score=23.20 Aligned_cols=40 Identities=18% Similarity=0.309 Sum_probs=21.2
Q ss_pred hhhcCccchhhHHHHHH-hhhhhhHHHHhhHHHHHHhhcCchhHHH
Q 016338 98 SRWFPSHERASAIGICM-GGFHLGNVVGLLLTPIMLSTIGISGPFI 142 (391)
Q Consensus 98 ~~~~~~~~rg~~~~~~~-~~~~lg~~~g~~~~~~l~~~~gwr~~f~ 142 (391)
.|+.|. +|-..++... ...+.|.++|| .+...+||-..++
T Consensus 47 vDYvP~-~~~vlfghhf~sIAGaGPI~GP----i~aa~~GwlPa~l 87 (376)
T PF02554_consen 47 VDYVPT-NKWVLFGHHFASIAGAGPIVGP----ILAAQFGWLPALL 87 (376)
T ss_pred CCCCCC-chHHhhHHHHHHHhccccchHH----HHHHHhcchHHHH
Confidence 355654 4455555543 33444555555 4446688874443
No 361
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=21.68 E-value=4.4e+02 Score=21.39 Aligned_cols=35 Identities=11% Similarity=-0.111 Sum_probs=27.9
Q ss_pred CCCcchhhHHhhhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 232 NVNLKQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (391)
Q Consensus 232 g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 266 (391)
.-|+.+....+..++++..+.....+...++.+++
T Consensus 146 s~s~~~G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 146 SGSPLYGALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred cCChHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 34777778888889999988888888888887654
No 362
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=21.65 E-value=6.5e+02 Score=23.31 Aligned_cols=30 Identities=23% Similarity=0.183 Sum_probs=19.0
Q ss_pred cchhhHHHHHHhhhhhhHHHHhhHHHHHHh
Q 016338 104 HERASAIGICMGGFHLGNVVGLLLTPIMLS 133 (391)
Q Consensus 104 ~~rg~~~~~~~~~~~lg~~~g~~~~~~l~~ 133 (391)
.+|.+.........-++..+-|++..+.-.
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w~ 136 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVWG 136 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHHC
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEEe
Confidence 346666666666666677777776655443
No 363
>PRK02237 hypothetical protein; Provisional
Probab=20.78 E-value=2.1e+02 Score=20.70 Aligned_cols=31 Identities=10% Similarity=-0.094 Sum_probs=26.8
Q ss_pred chhhHHhhhHHHHHHHHHHHHHHHHHHHHhh
Q 016338 236 KQAAWFSAVPWGTMAVSGYMAGKASDSLIKA 266 (391)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~~~~ 266 (391)
.+.|-..+.++...++.+++.++..|+....
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd 86 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPD 86 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCC
Confidence 3478889999999999999999999998754
No 364
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=20.69 E-value=3.1e+02 Score=21.31 Aligned_cols=50 Identities=22% Similarity=0.155 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhcCchHHHHHHHHHHHHHHhhhhhhhccchHHHHHHHHH
Q 016338 24 SSFLWGYIFSSVIGGALVDKYGGKKVLAWGVALWSLSTLLTPWAATHSTASLLAVRAF 81 (391)
Q Consensus 24 s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~r~l 81 (391)
-.++++..+.+...-.+..|..||+.-.++..+. . +.++|..++.++..+
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi~------G--ai~HN~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGISIA------G--AIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHH------H--HHHHHHHHHHHHHHH
Confidence 4566677777777778888887766544443322 1 222666666665554
No 365
>COG1284 Uncharacterized conserved protein [Function unknown]
Probab=20.12 E-value=3.6e+02 Score=23.69 Aligned_cols=44 Identities=9% Similarity=0.088 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhhhchh-----hhHHHHhhhhcCccchhhHHHHHHhhhhh
Q 016338 75 LLAVRAFFGLAEGVAM-----PAMSTLTSRWFPSHERASAIGICMGGFHL 119 (391)
Q Consensus 75 ~~~~r~l~G~g~~~~~-----~~~~~~i~~~~~~~~rg~~~~~~~~~~~l 119 (391)
-+.+-++.|+|.|..+ .-..-+++.+. .|++++-.|-.....+.
T Consensus 117 aifgG~l~G~G~glv~r~ggStGGtdIlA~~l-~kk~g~~iG~~ll~vd~ 165 (289)
T COG1284 117 ALFGGLLLGIGLGLVFRHGGSTGGTDILALIL-NKKFGISVGKILLLVDG 165 (289)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHH-HHHcCCChhhhHHHHHH
Confidence 3567888898888654 33445667776 46667777766666665
Done!