Query 016343
Match_columns 391
No_of_seqs 280 out of 1904
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 06:00:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016343.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016343hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02883 Branched-chain amino 100.0 1.1E-91 2.4E-96 704.3 39.4 380 12-391 2-384 (384)
2 PLN02259 branched-chain-amino- 100.0 4.6E-91 1E-95 701.0 38.4 383 7-391 1-388 (388)
3 PLN02782 Branched-chain amino 100.0 7.3E-88 1.6E-92 680.8 40.9 339 53-391 62-403 (403)
4 KOG0975 Branched chain aminotr 100.0 2.3E-89 5.1E-94 664.7 28.4 334 53-388 37-378 (379)
5 PLN03117 Branched-chain-amino- 100.0 5.5E-77 1.2E-81 594.8 41.2 340 52-391 11-351 (355)
6 PRK13357 branched-chain amino 100.0 8.7E-69 1.9E-73 536.2 41.0 341 51-391 7-356 (356)
7 TIGR01123 ilvE_II branched-cha 100.0 8.1E-62 1.8E-66 478.3 36.0 305 86-390 1-313 (313)
8 TIGR01122 ilvE_I branched-chai 100.0 4.2E-59 9.2E-64 455.9 34.3 290 86-390 1-298 (298)
9 PRK06606 branched-chain amino 100.0 2.7E-57 5.8E-62 444.9 34.7 291 85-390 9-306 (306)
10 COG0115 IlvE Branched-chain am 100.0 2.7E-55 5.9E-60 426.6 32.9 276 85-380 4-284 (284)
11 cd01557 BCAT_beta_family BCAT_ 100.0 1.6E-54 3.4E-59 420.2 33.7 276 98-378 1-279 (279)
12 PRK12479 branched-chain amino 100.0 2.2E-53 4.7E-58 416.1 32.7 275 85-379 6-287 (299)
13 PRK07544 branched-chain amino 100.0 2.5E-53 5.4E-58 414.2 31.6 274 85-380 11-290 (292)
14 PRK08320 branched-chain amino 100.0 8E-53 1.7E-57 409.6 33.5 272 85-376 5-283 (288)
15 PRK13356 aminotransferase; Pro 100.0 1.5E-52 3.2E-57 407.6 33.6 269 85-375 9-281 (286)
16 cd01558 D-AAT_like D-Alanine a 100.0 3E-52 6.5E-57 401.6 31.9 264 86-372 1-270 (270)
17 PRK07650 4-amino-4-deoxychoris 100.0 1E-51 2.2E-56 401.1 32.7 270 85-377 2-276 (283)
18 PRK06680 D-amino acid aminotra 100.0 3.5E-51 7.6E-56 398.0 33.9 270 85-378 5-283 (286)
19 TIGR01121 D_amino_aminoT D-ami 100.0 1E-50 2.3E-55 392.8 33.5 266 85-374 2-273 (276)
20 PLN02845 Branched-chain-amino- 100.0 9.1E-51 2E-55 403.3 33.7 272 85-378 43-324 (336)
21 PRK07849 4-amino-4-deoxychoris 100.0 1.1E-50 2.4E-55 395.7 33.4 266 85-374 9-286 (292)
22 PRK12400 D-amino acid aminotra 100.0 1.5E-50 3.2E-55 394.4 33.0 266 85-374 7-280 (290)
23 TIGR03461 pabC_Proteo aminodeo 100.0 6.7E-50 1.4E-54 383.7 32.0 256 86-369 1-260 (261)
24 PRK06092 4-amino-4-deoxychoris 100.0 1.2E-49 2.5E-54 383.5 32.6 261 85-373 2-266 (268)
25 cd00449 PLPDE_IV PyridoxaL 5'- 100.0 3.3E-49 7.1E-54 376.8 31.5 251 103-372 1-256 (256)
26 cd01559 ADCL_like ADCL_like: 4 100.0 3.2E-49 6.9E-54 376.7 30.5 247 103-372 1-249 (249)
27 PRK09266 hypothetical protein; 100.0 7.2E-48 1.6E-52 371.0 30.0 255 85-374 5-260 (266)
28 PF01063 Aminotran_4: Aminotra 100.0 3.7E-39 8.1E-44 302.4 26.5 224 129-372 1-231 (231)
29 PRK07546 hypothetical protein; 100.0 2E-36 4.4E-41 281.7 25.8 205 110-348 4-209 (209)
30 PRK07101 hypothetical protein; 100.0 2.7E-28 5.7E-33 223.7 22.5 182 111-342 4-187 (187)
31 PF15507 DUF4649: Domain of un 70.2 7.5 0.00016 30.2 3.9 53 318-370 11-65 (72)
32 PF03698 UPF0180: Uncharacteri 35.3 1.1E+02 0.0023 24.3 5.3 66 305-372 12-79 (80)
33 PRK03094 hypothetical protein; 26.8 2.1E+02 0.0046 22.7 5.6 65 306-372 13-79 (80)
34 cd05569 PTS_IIB_fructose PTS_I 25.1 1.4E+02 0.0029 24.2 4.5 37 304-340 19-64 (96)
35 TIGR00829 FRU PTS system, fruc 24.9 1.1E+02 0.0025 24.2 3.9 33 308-340 22-63 (85)
36 KOG3442 Uncharacterized conser 22.9 1.7E+02 0.0038 25.2 4.7 40 138-181 58-98 (132)
37 PRK10474 putative PTS system f 21.6 1.4E+02 0.003 23.8 3.8 37 304-340 4-49 (88)
38 PF13051 DUF3912: Protein of u 21.0 87 0.0019 23.3 2.2 39 276-314 30-68 (68)
39 PF09778 Guanylate_cyc_2: Guan 20.9 1E+02 0.0023 29.0 3.4 28 302-329 91-118 (212)
40 COG2257 Uncharacterized homolo 20.8 69 0.0015 26.1 1.8 32 299-330 30-61 (92)
No 1
>PLN02883 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=1.1e-91 Score=704.25 Aligned_cols=380 Identities=62% Similarity=1.002 Sum_probs=352.9
Q ss_pred HHHh-hhhhhhccccccccCcccccchhhhhcccccCCCCCCCCCCccCCCCCCCCCcccccCCceEEEEeec-ceEecC
Q 016343 12 CLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQDCEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKG 89 (391)
Q Consensus 12 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~-~~w~~g 89 (391)
.||+ |.|++.+++-.+..+.+.++.+++..++...+.......++..+++||++|+||++|||||++++|.+ ++|.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~~~ 81 (384)
T PLN02883 2 ALRRCLPQSSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDKLGFSLVRTDFMFATKSCRDGNFEQG 81 (384)
T ss_pred chhhhccccccchhhhhccccceeccccccccchhhhcccccccccccccCCchhcCcCCeecCceEEEEEcCCCcccCC
Confidence 4666 78888888878899999899998888765444444456777788999999999999999999999887 489999
Q ss_pred eeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCC
Q 016343 90 RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRW 169 (391)
Q Consensus 90 ~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~ 169 (391)
+|+|+++++|||++++||||||||||||+|++.||++++|||++|++||++||++|+||.++.++|+++|+++++.|..|
T Consensus 82 ~i~p~~~l~l~p~a~~l~YGdgvFEg~kayr~~dG~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~lv~~n~~w 161 (384)
T PLN02883 82 YLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRILLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLANRRW 161 (384)
T ss_pred eEeeCCCcccCccccHhhcceeeeeeEEEEECCCCCEeeeChhHHHHHHHHHHHHhCCCCcCHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-CcccEEEEeeccccccCCCCCCCcCccCChHHHHH
Q 016343 170 VPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-GLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLK 248 (391)
Q Consensus 170 vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~ 248 (391)
||+.+.+++||||+++++++.+|+.++.+++|+|+++|+++|++ |++++++.+++.++|++|++++++|++|||+++++
T Consensus 162 vp~~~~~~lYIRp~v~~~~~~lG~~~~~~~~~~i~~~p~~~y~~~g~~~v~l~~~~~~~Ra~~~g~g~~K~~~nYa~~ll 241 (384)
T PLN02883 162 VPPPGKGSLYLRPLLFGSGASLGVAAAPEYTFLVFGSPVQNYFKEGTAALNLYVEEVIPRAYLGGTGGVKAISNYGPVLE 241 (384)
T ss_pred CCCCCCceEEEEEEEEecCCccCCCCCCCeEEEEEEEecccccccCcceEEEEECccccccCCCCCcccchhhhHHHHHH
Confidence 99987779999999999988899998889999999999999987 88899999988889999999999999999999999
Q ss_pred HHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHh
Q 016343 249 AISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELL 328 (391)
Q Consensus 249 a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~ 328 (391)
++++|+++||||+||||..++|+|+|+++||||++++++|+||+++++||+||||++||++|+++|++|+||+|+++||.
T Consensus 242 a~~eA~~~G~de~L~Ld~~~~~~V~E~~~sNlF~v~~~~l~TP~l~~~iLpGITR~svl~la~~~G~~V~Er~i~~~eL~ 321 (384)
T PLN02883 242 VMRRAKSRGFSDVLYLDADTGKNIEEVSAANIFLVKGNIIVTPATSGTILGGITRKSIIEIALDLGYKVEERRVPVEELK 321 (384)
T ss_pred HHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEeCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEECCHHHHH
Confidence 99999999999999999865679999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHhhhccCCCCCCCCeEECC
Q 016343 329 EADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 329 ~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
+|||+|+|||+++|+||++|+++++.+.+..+.||++++|+++|.+||+|+++|++||+++|.
T Consensus 322 ~AdEvF~tgTa~~I~PV~~I~~~~~~~~~~~~~G~vt~~L~~~l~~iq~G~~~d~~~W~~~~~ 384 (384)
T PLN02883 322 EAEEVFCTGTAAGVASVGSITFKNTRTEYKVGDGIVTQQLRSILLGIQTGSIQDTKDWVLQIA 384 (384)
T ss_pred hCCEeeeccChhheEEEEEEeccCceeecccCCCHHHHHHHHHHHHHHcCCCCCCCCCeEeCC
Confidence 999999999999999999999888766443335899999999999999999999999999873
No 2
>PLN02259 branched-chain-amino-acid aminotransferase 2
Probab=100.00 E-value=4.6e-91 Score=701.04 Aligned_cols=383 Identities=69% Similarity=1.148 Sum_probs=357.0
Q ss_pred HHH-HHHHHh-hhhhhhccccccccCcccccchhhhhccccc-CCCCCCCCCCccCCCCCCCCCcccccCCceEEEEeec
Q 016343 7 MIR-NACLRN-FSQSLRVGSAFLKSGDFCRYTSQAAASLQQD-CEPSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSN 83 (391)
Q Consensus 7 ~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~ 83 (391)
||+ ..+||+ |+..++++. ..++.+.++.+++..++... +.......+++.+++||++|+||+++||||++++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~~~~td~m~~~~~~~ 78 (388)
T PLN02259 1 MIKTITSLRKTLVLPLHLHI--RTLQTFAKYNAQAASALREERKKPLYQNGDDVYADLDWDNLGFGLNPADYMYVMKCSK 78 (388)
T ss_pred CccchhhhhhheEeeeehhh--hhhhhhhhhccccccccchhhccccccccccccccCCccccCCCCcccCceEEEEECC
Confidence 667 788999 888888888 88889988888888776432 3333446677778999999999999999999999976
Q ss_pred -ceEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Q 016343 84 -DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQT 162 (391)
Q Consensus 84 -~~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~l 162 (391)
|+|.||+++|++++.|+|.|++||||||||||||+|+.+||++++||+++|++||++||++|+||.++.++|.++|.++
T Consensus 79 ~~~w~~g~ivp~~~~~i~~~drgl~YGdgvFEglkayr~~~G~i~lfr~~~h~~RL~~SA~rL~lp~~~~e~~~~~i~~l 158 (388)
T PLN02259 79 DGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQT 158 (388)
T ss_pred CCeEECCEEeEchhCeeCchhhHHHhhhhhhhcEEEEECCCCeEeecCcHHHHHHHHHhHHHhCCCCcCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-CcccEEEEeeccccccCCCCCCCcCccC
Q 016343 163 ALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-GLAPLNLYVEDEFHRATPGGAGGVKAIS 241 (391)
Q Consensus 163 v~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~ 241 (391)
++.|..|||+.+.+++||||+++|+++.+|+.|+.+++++|+++|+++|++ |++++++.+++++.|++|++++++|+++
T Consensus 159 v~~n~~~vp~~~~~~lyiRp~v~g~~~~lG~~p~~~~~~~i~~~p~~~~~~~g~~~i~l~v~~~~~Ra~p~~~g~~K~~~ 238 (388)
T PLN02259 159 ALANKRWVPPAGKGTLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAGGVKSIT 238 (388)
T ss_pred HHhccccCCCCCCceEEEEEEEEecCCccCcCCCCCcEEEEEEEechhhhhcCcceEEEEeecceeccCCCCCcccchhh
Confidence 999999999987779999999999988899998888999999999999887 8888999888889999999999999998
Q ss_pred ChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEe
Q 016343 242 NYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERA 321 (391)
Q Consensus 242 nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~ 321 (391)
||+++++++++|+++||||+||||..++|+|+|+++||||++++++|+||+++++||+||||++||++|+++|++|+||+
T Consensus 239 NY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP~l~~~iL~GITR~sIl~la~~~G~~V~Er~ 318 (388)
T PLN02259 239 NYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNGTILEGITRKSVMEIASDQGYQVVEKA 318 (388)
T ss_pred hHHHHHHHHHHHHHcCCCEEEEecCCCCCEEEEcCcEEEEEEECCEEEcCCCcCCcCcCHHHHHHHHHHHHCCCeEEEEE
Confidence 99999999999999999999999976689999999999999999999999999999999999999999999999999999
Q ss_pred eCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHhhhccCCCCCCCCeEECC
Q 016343 322 IPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 322 i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
|+++||.+|||+|+|||+++|+||++|+++|+.+.++++.||++++|+++|.+||+|++||++||+++||
T Consensus 319 i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~~~~~~~~~~~g~~t~~L~~~l~~iq~G~~~~~~~W~~~~~ 388 (388)
T PLN02259 319 VHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRVEYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388 (388)
T ss_pred CCHHHHHhCCEEEEcCCcceEEEEEEEecCCceEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCCCeEECC
Confidence 9999999999999999999999999999988887777667899999999999999999999999999986
No 3
>PLN02782 Branched-chain amino acid aminotransferase
Probab=100.00 E-value=7.3e-88 Score=680.83 Aligned_cols=339 Identities=71% Similarity=1.227 Sum_probs=323.1
Q ss_pred CCCCccCCCCCCCCCcccccCCceEEEEeec-ceEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeCh
Q 016343 53 SDDESADHMDWDNLGFGLTPADYMYTMKCSN-DYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRP 131 (391)
Q Consensus 53 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~-~~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~ 131 (391)
...+...++||++|+||+++||||++++|++ |+|.||+|+|++++.|+|.|++||||||||||||+|+++||++++|||
T Consensus 62 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~ 141 (403)
T PLN02782 62 TEVTELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRP 141 (403)
T ss_pred cCCcccccCCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeCh
Confidence 3445567899999999999999999999966 589999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCc
Q 016343 132 DQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNY 211 (391)
Q Consensus 132 ~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y 211 (391)
++|++||++||++|+||.++.++|+++|+++++.|..|||+.+.+++||||+++|+++.+|+.++.+++++|+++|+++|
T Consensus 142 d~H~~RL~~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~ 221 (403)
T PLN02782 142 EENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNY 221 (403)
T ss_pred HHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECccc
Confidence 99999999999999999999999999999999999999999877799999999999888999988889999999999998
Q ss_pred CC-CcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEc
Q 016343 212 FK-GLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIIST 290 (391)
Q Consensus 212 ~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~T 290 (391)
++ |++++++.+++++.|++|++++++|++|||+++++++++|+++||||+||||..++|+|+|+++||||++++++|+|
T Consensus 222 ~~~g~~~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~T 301 (403)
T PLN02782 222 FKEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVIST 301 (403)
T ss_pred cccCCccEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEc
Confidence 87 88899999987899999999999999999999999999999999999999997558999999999999999999999
Q ss_pred cCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHH
Q 016343 291 PATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELY 369 (391)
Q Consensus 291 P~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~ 369 (391)
|+++++||+||||++||++|+++|++|+||+|+++||.+|||+|+|||+++|+||++|.|+|+.+.++++ +||++++|+
T Consensus 302 P~l~~~iLpGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~ 381 (403)
T PLN02782 302 PAIKGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLY 381 (403)
T ss_pred CCCcCCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999878766 799999999
Q ss_pred HHHHhhhccCCCCCCCCeEECC
Q 016343 370 STLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 370 ~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
+.|.+||+|+.||++||+++|+
T Consensus 382 ~~l~~iq~G~~~~~~~W~~~v~ 403 (403)
T PLN02782 382 TVLTSLQMGLIEDNMNWTVELS 403 (403)
T ss_pred HHHHHHhcCCCCCCCCCeEECC
Confidence 9999999999999999999986
No 4
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-89 Score=664.70 Aligned_cols=334 Identities=56% Similarity=0.965 Sum_probs=321.2
Q ss_pred CCCCccCCCCCCCCCcccccCCceEEEEeecceEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChH
Q 016343 53 SDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPD 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~ 132 (391)
..+.+...+||++|+||.+|||||++++|+.++|..|+|.|++++.+||++.+|||||++||||||||++||++++|||+
T Consensus 37 ~~~~k~~~~d~~~L~fg~~~td~m~~~k~~~~gw~~~~I~p~gni~~~Paa~vlhy~~~lfEG~KAyRt~d~~i~LFrPd 116 (379)
T KOG0975|consen 37 QTDEKPAPIDWDELGFGLVFTDHMLTIKWSEDGWSQGEISPFGNLSLHPAAKVLHYGQGLFEGLKAYRTEDGKIRLFRPD 116 (379)
T ss_pred cCCCccCcCCHHHhccCCcccceeEEEeccccCcCCCCccCcCCEeeChhhhceecchhhccccccccCCCCeEEEecch
Confidence 34666778999999999999999999999977899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcC
Q 016343 133 QNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF 212 (391)
Q Consensus 133 ~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~ 212 (391)
+|++||++||.|++||.|+.++|.++|++++.+|++|||+.++++|||||+++|+++.+|++++.+++|+|+++|+++||
T Consensus 117 ~N~~Rm~~sA~r~~lP~p~~~e~ie~i~~lv~~~~~wVP~~~~~SLyirp~l~Gt~~~Lgv~~~~e~~l~vi~spvg~yf 196 (379)
T KOG0975|consen 117 QNMDRMLRSAERACLPSPDVEEFIEAIKQLVLADKEWVPPPGKGSLYIRPLLIGTDPVLGVSPAPEATLFVIVSPVGPYF 196 (379)
T ss_pred hhHHHHHhhhhhccCCCCCHHHHHHHHHHHHHhcCcccCCCCCceEEEeeeeccCCcccccccCCcceEEEEEcccchhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCE--EE
Q 016343 213 K-GLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNI--IS 289 (391)
Q Consensus 213 ~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~--l~ 289 (391)
+ |+++++|.+++.++|++|+|+|+.|+++||+++++++.||+++||+|+||||.+ ++||+|+++||||++++|+ ++
T Consensus 197 ~~g~~~v~L~v~~~~~Ra~pgg~g~~k~~~NY~P~vl~q~eA~~~G~~dvLwL~~d-~~~ItEv~tmNiF~v~~n~~elv 275 (379)
T KOG0975|consen 197 KSGFKGVNLLVDPEFVRAWPGGTGGVKLGGNYAPNVLAQKEAKSKGASDVLWLDGD-GGYITEVGTMNIFMVKKNEDELV 275 (379)
T ss_pred cccccceEEEEecceeecCCCCCCceeeccccchHHHHHHHHHhcCcceeEEEecC-CCceeeccceeEEEEEcCceeEe
Confidence 9 999999999999999999999999999999999999999999999999999986 3599999999999999988 99
Q ss_pred ccCCCCCccccHHHHHHHHHHHHCC-CcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEE---eeCCC-chHH
Q 016343 290 TPATSGTILAGITRKSIIEIASDCG-FQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRI---EFKTG-AQSV 364 (391)
Q Consensus 290 TP~l~~~iL~GITR~silela~~~G-~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~---~~~~~-~g~v 364 (391)
|||+++.|||||||++|+|+|+++| ++|+||.++++|+.+|+|+|+||||++|.||++|.|+++.| .+++| .||+
T Consensus 276 TPp~dg~ILpGvTR~sileLa~~~g~~~V~Er~vtv~e~~~A~Evf~tGTA~~v~pV~~i~~~~~~i~~~~~~~g~~g~l 355 (379)
T KOG0975|consen 276 TPPLDGTILPGVTRKSILELARDLGEFKVEERDVTVDELKTADEVFCTGTAAVVSPVGSILYKDEKIHIPTIGEGKEGPL 355 (379)
T ss_pred cCCCCCcccCCccHHHHHHHHHHhCceEEEEEEEeHHHhhhhHhhhcccceeeeccccceeecccccceeecCCCCccHH
Confidence 9999999999999999999999999 99999999999999999999999999999999999999443 45677 8999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCeE
Q 016343 365 SRELYSTLVGIQTGLIKDNKGWTV 388 (391)
Q Consensus 365 t~~L~~~l~~iq~g~~~d~~~W~~ 388 (391)
+++|++.|.+||+|. ++..+|++
T Consensus 356 ~~~l~~~l~~iq~g~-~~~~~w~~ 378 (379)
T KOG0975|consen 356 AKKLLSTLTDIQYGR-EPKKGWTV 378 (379)
T ss_pred HHHHHHHHHHhhcCC-cCCCCccc
Confidence 999999999999999 88889986
No 5
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional
Probab=100.00 E-value=5.5e-77 Score=594.79 Aligned_cols=340 Identities=61% Similarity=1.103 Sum_probs=313.8
Q ss_pred CCCCCccCCCCCCCCCcccccCCceEEEEeecc-eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeC
Q 016343 52 YSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFR 130 (391)
Q Consensus 52 ~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr 130 (391)
+....+..++||++||||.+|||||+.++|.++ +|.||+|+|.+++.|++.|++||||||||||||+|+..||++++|+
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~~~m~~~~~~~~~~~~ng~~v~~~~a~i~~~drgl~yGDGvFEtir~y~~~~G~i~lf~ 90 (355)
T PLN03117 11 SKADEKYANVKWEELGFALVPTDYMYVAKCKQGESFSEGKIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFR 90 (355)
T ss_pred CCccccccccCccccCCCccccCceEEEEcCCCCeEECCEEEEchhceeCcchhhhhhcceeEeeEEEEECCCCcEeeeC
Confidence 445555677999999999999999999999876 7999999999999999999999999999999999988899999999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCC
Q 016343 131 PDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGN 210 (391)
Q Consensus 131 ~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~ 210 (391)
+++|++||++||++|+||.++.+.|.+.|.++++.|..|+|+.+.+.+||||+++|.++.+|+.++.++.+++++.|.++
T Consensus 91 l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i~~lv~~n~~~i~~~~~~~~yir~~~~g~~~~~g~~~~~~~~~~i~~~p~~~ 170 (355)
T PLN03117 91 PDQNALRMQTGADRLCMTPPSLEQFVEAVKQTVLANKKWVPPPGKGTLYIRPLLIGSGAVLGVAPAPEYTFLIYASPVGN 170 (355)
T ss_pred cHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccccCCCCCcEEEEEEEEEecCccCcCCCCCcEEEEEEEeccc
Confidence 99999999999999999998999999999999999999998776678999999887777778887777888999999877
Q ss_pred cCCCcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEc
Q 016343 211 YFKGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIIST 290 (391)
Q Consensus 211 y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~T 290 (391)
++...+++++.+++.+.|+.|.+++++|+++||+.+++++++|+++||||+||||..++|+|+|++++|||+++|++|+|
T Consensus 171 ~~~~~~gi~l~~~~~~~r~~~~~l~~~K~~~nyl~~vla~~eA~~~G~deaL~ld~~~~g~v~E~~~sNlF~v~~~~l~T 250 (355)
T PLN03117 171 YHKASSGLNLKVDHKHRRAHSGGTGGVKSCTNYSPVVKSLIEAKSSGFSDVLFLDAATGKNIEELSACNIFILKGNIVST 250 (355)
T ss_pred cccCCCCEEEEEcCceEeCCCCCccchhhhhhhHHHHHHHHHHHHCCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEe
Confidence 65434678888776688999999999999779999999999999999999999997434799999999999999999999
Q ss_pred cCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHH
Q 016343 291 PATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYS 370 (391)
Q Consensus 291 P~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~ 370 (391)
|+++.+||+||||++||++|+++|++|+|+.++++||.+|||+|+|||+++|+||.+|++.++.+.++++.||+|++|++
T Consensus 251 P~l~~~iL~GItR~~vl~la~~~Gi~v~Er~i~~~eL~~AdEvFltnT~~~I~PV~~i~~~~~~~~~~~~~~~~~~~l~~ 330 (355)
T PLN03117 251 PPTSGTILPGVTRKSISELARDIGYQVEERDVSVDELLEAEEVFCTGTAVVVKAVETVTFHDKKVKYRTGEEALSTKLHL 330 (355)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHCCCEEEEEEccHHHHhhCCEEEEccCcceEEEEEEEEecCceEEeCCCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888888887767899999999
Q ss_pred HHHhhhccCCCCCCCCeEECC
Q 016343 371 TLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 371 ~l~~iq~g~~~d~~~W~~~v~ 391 (391)
+|.+||+|+.+|++||+++|+
T Consensus 331 ~~~~~~~g~~~~~~~W~~~v~ 351 (355)
T PLN03117 331 ILTNIQMGVVEDKKGWMVEID 351 (355)
T ss_pred HHHHHhCCCCCCCCCCEEEcc
Confidence 999999999999999999984
No 6
>PRK13357 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=8.7e-69 Score=536.24 Aligned_cols=341 Identities=45% Similarity=0.826 Sum_probs=306.5
Q ss_pred CCCCCCccCCCCCCCCCcccccCCceEEEEeecceEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeC
Q 016343 51 AYSDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFR 130 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr 130 (391)
|......+..+||++||||++.+|||++..|++|.|.||+++|.+++.|++.|++|+||||||||+|+|++.+|++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nG~~vp~~~a~is~~Drg~~yGDGvFEtir~~~~~~G~~~~f~ 86 (356)
T PRK13357 7 PNPTSDEKRAIDWANLGFGYVFTDHMVVIDYKDGKWHDARLVPYGPLELDPAATVLHYGQEIFEGLKAYRHKDGSIVLFR 86 (356)
T ss_pred CCcccccccCCCccccCCCccccceeEEEEecCCcccCCeEeeCCCceeCcccchhhhcceeeeeEEEEEcCCCcEeeeC
Confidence 33444556678999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred hHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCC-CCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCC
Q 016343 131 PDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPP-PGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVG 209 (391)
Q Consensus 131 ~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~-~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~ 209 (391)
+++|++||.+||++|+||.++.+.+.+.+.++++.|..++++ ..++.+|||+++.++...+|+.+...+++++++.|.+
T Consensus 87 l~~Hl~RL~~Sa~~L~i~~~~~~~l~~~i~~li~~n~~~~~~~~~~~~~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~ 166 (356)
T PRK13357 87 PDANAKRLQRSADRLLMPELPEELFLEAVKQLVKADRDWVPPYGEGASLYLRPFMIATEPFLGVKPAEEYIFCVIASPVG 166 (356)
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhcccccCCCCCCccEEEEEEEEccCCcccccCCCccEEEEEEEech
Confidence 999999999999999999778999999999999999876533 2235789999888666667887666788999999887
Q ss_pred CcCC-CcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEE
Q 016343 210 NYFK-GLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNII 288 (391)
Q Consensus 210 ~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l 288 (391)
+++. +.+++++.+...+.|..|..++++|+..||+.+++++++|+++||||+|++|..++|+|+|++++|||+++++++
T Consensus 167 ~~~~~~~~~v~l~~~~~~~r~~~~~l~~~Kt~~nyl~~vla~~eA~~~G~deaL~ld~~~~G~V~E~s~sNlF~v~~~~l 246 (356)
T PRK13357 167 AYFKGGVKPVSIWVSDEYDRAAPGGTGAAKVGGNYAASLLAQAEAKEKGCDQVLYLDAVEHTYIEEVGGMNFFFITKDGT 246 (356)
T ss_pred hhcccCCCceEEEEcCCeEecCCCCcchhhcccccHHHHHHHHHHHHCCCCEEEEEcCCCCCEEEEcCcEEEEEEECCEE
Confidence 7665 567888877767889999888999996699999999999999999999999964479999999999999999999
Q ss_pred EccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHh------HhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-c
Q 016343 289 STPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDE------LLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-A 361 (391)
Q Consensus 289 ~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~e------L~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~ 361 (391)
+|||++.+||+||||+.||++|+++|++|+|++++++| |.+|||+|+|||+.+|+||.+|++++....++++ +
T Consensus 247 ~TPpl~~giL~GItR~~vlela~~~Gi~v~e~~i~~~el~~~~~L~~AdevFltnS~~gi~PV~~id~~~~~~~~~~g~~ 326 (356)
T PRK13357 247 VTPPLSGSILPGITRDSLLQLAEDLGLTVEERPVSIDEWQADAASGEFTEAFACGTAAVITPIGGIKYKDKEFVIGDGEV 326 (356)
T ss_pred EECCCCCCCCcchHHHHHHHHHHHCCCeEEEEecCHHHhhhhhccCcceEEEEcccccEEEEEEEEEeCCCEEEcCCCCC
Confidence 99999999999999999999999999999999999999 8999999999999999999999866555556665 8
Q ss_pred hHHHHHHHHHHHhhhccCCCCCCCCeEECC
Q 016343 362 QSVSRELYSTLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 362 g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
||++++|++.|.+++.|+.++..+|.++||
T Consensus 327 g~~t~~L~~~~~~~~~~~~~~~~~w~~~~~ 356 (356)
T PRK13357 327 GPVTQKLYDELTGIQFGDVEDPHGWIVKVD 356 (356)
T ss_pred ChHHHHHHHHHHHHhcCCCCCCCCCcEeCc
Confidence 999999999999999999999999999987
No 7
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family less similar to the DAAT family.
Probab=100.00 E-value=8.1e-62 Score=478.30 Aligned_cols=305 Identities=50% Similarity=0.895 Sum_probs=274.4
Q ss_pred EecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Q 016343 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA 165 (391)
Q Consensus 86 w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~ 165 (391)
|.||+++|.+++.|++.|++|+||||||||||+|+..+|++++|++++|++||.+||++|+||.++.+.|.+.+.++++.
T Consensus 1 ~~nG~~~~~~~a~i~~~Drg~~yGdGvFEtir~~~~~~g~~~~~~l~~Hl~RL~~sa~~L~i~~~~~~~l~~~l~~~~~~ 80 (313)
T TIGR01123 1 WHNGRLTPYGPLHLDPGSTVLHYGQECFEGLKAYRCADGSIVLFRPDANAARLRRSARRLLMPELPDELFLEALRQLVKA 80 (313)
T ss_pred CCCCEEEECccCeeCcchhHHHhhhhheeeeeEEECCCCcEeeeChHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999998779999899999999999999999999988999999999999999
Q ss_pred cCCCCCCCC-CccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-CcccEEEEeeccccccCCCCCCCcCccCCh
Q 016343 166 NKRWVPPPG-KGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-GLAPLNLYVEDEFHRATPGGAGGVKAISNY 243 (391)
Q Consensus 166 ~~~~vp~~~-~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY 243 (391)
|..++++.. ++.+||||++.+.++.+|+++++.+.++|++.|.++++. |.+++++.+...+.|..|..++++|+..||
T Consensus 81 ~~~~~~~~~~~~~~~ir~~v~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~l~~~K~~~ny 160 (313)
T TIGR01123 81 NKDWVPPYGSGASLYLRPFVIGTEPNLGVRPAPEYLFYVFASPVGAYFKGGLAPVSIFVTTEYDRAAPGGTGAVKVGGNY 160 (313)
T ss_pred ccccCCCCCCCCcEEEEeEEEecCCccccCCCCccEEEEEEEEchhhccccccceeEEecccceecCCCCCccceecccc
Confidence 987765432 457899998887666678877667788888888877665 666777766567788888888999996699
Q ss_pred HHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeC-CEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEee
Q 016343 244 APVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKG-NIISTPATSGTILAGITRKSIIEIASDCGFQVEERAI 322 (391)
Q Consensus 244 ~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~-~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i 322 (391)
+.+++++++|+++||||+|++|.+.+|+|+|++++|+|++++ |+|+|||++.+||+||||+.||++|+++|++|+|++|
T Consensus 161 l~~vla~~eA~~~g~deal~ld~~g~g~v~E~~~sNlf~v~~~g~l~Tp~l~~~~L~GItR~~vi~l~~~~Gi~v~e~~i 240 (313)
T TIGR01123 161 AASLLAQAKAAEQGCDQVVYLDPVEHTYIEEVGAMNFFFITGDGELVTPPLSGSILPGITRDSLLQLAKDLGMEVEERRI 240 (313)
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCCCeEEEEcCcEeEEEEEcCCEEEeCCCCCCCCcchHHHHHHHHHHHcCCeEEEEec
Confidence 999999999999999999999984334599999999999985 7999999999999999999999999999999999999
Q ss_pred CHHhHhcc----ceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhccCCCCCCCCeEEC
Q 016343 323 PVDELLEA----DEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 390 (391)
Q Consensus 323 ~~~eL~~a----dEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 390 (391)
+++||.+| ||+|+|||+.+|+||.+|+++++.+.++++ +||++++|++.|.++++|+.++..+|+++|
T Consensus 241 ~~~~l~~A~~~~devfltnS~~gi~PV~~i~~d~~~~~~~~g~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~~ 313 (313)
T TIGR01123 241 DIDELKAFVEAGEEVFACGTAAVITPVGEIQHGGKEVVFASGQPGEVTKALYDELTDIQYGDFEDPYGWIVEV 313 (313)
T ss_pred CHHHHHHHHhcCCEEEEccCceEEEEEEEEEECCeEEEcCCCCCChHHHHHHHHHHHHhcCCCCCCCCCeeeC
Confidence 99999998 999999999999999999877887667766 899999999999999999999888999876
No 8
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I. Among the class IV aminotransferases are two phylogenetically separable groups of branched-chain amino acid aminotransferase (IlvE). The last common ancestor of the two lineages appears also to have given rise to a family of D-amino acid aminotransferases (DAAT). This model represents the IlvE family more strongly similar to the DAAT family.
Probab=100.00 E-value=4.2e-59 Score=455.89 Aligned_cols=290 Identities=32% Similarity=0.545 Sum_probs=257.1
Q ss_pred EecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHH
Q 016343 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164 (391)
Q Consensus 86 w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv~ 164 (391)
|.||+++|.+++.+++.|++|+||||+|||||+|++.||. ++|++++|++||.+||++|+|+.+ +.+.+.+.+.++++
T Consensus 1 ~~ng~~v~~~~~~i~~~drg~~~GdgvFEt~r~~~g~~~~-~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i~ 79 (298)
T TIGR01122 1 WMDGEFVDWEDAKVHVLTHALHYGTGVFEGIRAYDTDKGP-AIFRLKEHIQRLYDSAKIYRMEIPYSKEELMEATRETLR 79 (298)
T ss_pred CcCCEEEEhhhcccChhhhhhhccceEEEEEEEEcCCCcc-eeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999776544 588999999999999999999976 79999999999999
Q ss_pred HcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC-C--cccEEEEeeccccccCCCCC-CCcC
Q 016343 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK-G--LAPLNLYVEDEFHRATPGGA-GGVK 238 (391)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~-G--~~pv~l~v~~~~~R~~p~g~-g~~K 238 (391)
.+.. ...|||++++++.+.+|+.+. .++++++++.|.+.|+. . .+++++.+. ++.|..+..+ +++|
T Consensus 80 ~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~l~~~-~~~r~~~~~~~~~~K 151 (298)
T TIGR01122 80 KNNL-------RSAYIRPLVFRGDGDLGLNPRAGYKPDVIIAAWPWGAYLGEEALEKGIDAKVS-SWRRNAPNTIPTAAK 151 (298)
T ss_pred hcCC-------CCEEEEEEEEEccCCCCcCCCCCCCceEEEEEeccccccCcccccCCeEEEEE-EEEcCCCCCcCccch
Confidence 8752 357999988755556677653 35778888888766542 1 257788776 4678777664 8999
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEE
Q 016343 239 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 318 (391)
Q Consensus 239 ~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~ 318 (391)
+.+||+.++++.++|+++|+||+|++|. +|+|+|++++|+|++++++|+||+++.++|+||||+.|+++|+++|++|+
T Consensus 152 ~~~~yl~~v~a~~~a~~~g~de~l~ld~--~g~v~E~s~sNlf~v~~~~l~TP~~~~~~L~GItR~~il~la~~~g~~v~ 229 (298)
T TIGR01122 152 AGGNYLNSLLAKSEARRHGYDEAILLDV--EGYVAEGSGENIFIVKDGVLFTPPVTSSILPGITRDTVITLAKELGIEVV 229 (298)
T ss_pred hhhhhHHHHHHHHHHHHcCCCEEEEECC--CCCEEECCceEEEEEECCEEECCCCCCCcCcchHHHHHHHHHHHcCCcEE
Confidence 9877999999999999999999999997 79999999999999999999999999999999999999999999999999
Q ss_pred EEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhccCCCCCCCCeEEC
Q 016343 319 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 390 (391)
Q Consensus 319 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 390 (391)
|++|+++||.+|||+|+|||+.+|+||.+| ++..+ +++ +||++++|++.|.++++|..+|+++|+++|
T Consensus 230 e~~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~~~~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~~ 298 (298)
T TIGR01122 230 EQPISREELYTADEAFFTGTAAEITPIREV--DGRKI--GNGRRGPVTKKLQEAFFDLVTGGTEDYWGWLTYV 298 (298)
T ss_pred EEeCCHHHHhhCCEEEEcCCcceEEEEEEE--CCEEC--CCCCCChHHHHHHHHHHHHHcCCCCCcCCCceeC
Confidence 999999999999999999999999999999 46554 666 899999999999999999999999999875
No 9
>PRK06606 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=2.7e-57 Score=444.92 Aligned_cols=291 Identities=32% Similarity=0.544 Sum_probs=258.0
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|..++.+++.|++|+||||||||+|+|++++|+ ++|++++|++||.+||++|+|+.+ +.+.+.+.+.+++
T Consensus 9 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEtir~~~g~~~~-~~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i 87 (306)
T PRK06606 9 IWFNGELVPWEDAKVHVLTHALHYGTGVFEGIRAYDTPKGP-AIFRLREHTKRLFNSAKILRMEIPYSVDELMEAQREVV 87 (306)
T ss_pred EEECCEEEEhHHcccChhhhhhhhcceeEEEEEEecCCCCC-eeeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999887776 378899999999999999999977 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCC-CCcEEEEEEeeCCCcCC--Cc-ccEEEEeeccccccCCCC-CCCcC
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA-PEYTFLVFASPVGNYFK--GL-APLNLYVEDEFHRATPGG-AGGVK 238 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~-~~~~~~v~~~P~~~y~~--G~-~pv~l~v~~~~~R~~p~g-~g~~K 238 (391)
+.+.. ...|||++++.+.+.+|+.+. ..+++++++.|.++|+. +. +++++.++ ++.|..+.. .+.+|
T Consensus 88 ~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~l~~~-~~~r~~~~~~~~~~K 159 (306)
T PRK06606 88 RKNNL-------KSAYIRPLVFVGDEGLGVRPHGLPTDVAIAAWPWGAYLGEEALEKGIRVKVS-SWTRHAPNSIPTRAK 159 (306)
T ss_pred HhcCC-------CCEEEEEEEEecCCccCcCCCCCCceEEEEEeccccccCcccccCCeEEEEe-eEecCCCCCcCcchh
Confidence 98752 367999988765555677654 35678888888766543 22 47788766 467776655 47899
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEE
Q 016343 239 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 318 (391)
Q Consensus 239 ~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~ 318 (391)
+.+||+.++++.++|+++|+||+|++|+ +|+|+|++++|||++++++|+||+++.+||+||||+.|+++|+++|++|+
T Consensus 160 ~~~nyl~~vla~~ea~~~G~de~l~l~~--~g~v~E~~~sNlf~v~~~~l~TP~~~~giL~GitR~~vl~~~~~~g~~v~ 237 (306)
T PRK06606 160 ASGNYLNSILAKTEARRNGYDEALLLDV--EGYVSEGSGENIFIVRDGVLYTPPLTSSILEGITRDTVITLAKDLGIEVI 237 (306)
T ss_pred hhhccHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCceEEEEEECCEEECCCCcCCcCCCHHHHHHHHHHHHcCCcEE
Confidence 8779999999999999999999999997 79999999999999999999999999999999999999999999999999
Q ss_pred EEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhccCCCCCCCCeEEC
Q 016343 319 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 390 (391)
Q Consensus 319 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 390 (391)
|++|+++||.+|||+|+|||+.+|+||.+| +++.+ +++ +||++++|++.|.+.+.++.+|..+|+++|
T Consensus 238 e~~i~~~eL~~AdevfltnS~~gi~PV~~i--d~~~~--~~g~~g~~~~~L~~~~~~~~~~~~~~~~~~~~~~ 306 (306)
T PRK06606 238 ERRITRDELYIADEVFFTGTAAEVTPIREV--DGRQI--GNGKRGPITEKLQSAYFDIVRGRTEKYAHWLTPV 306 (306)
T ss_pred EEeCCHHHHhhCCEEEEcCCcceEEEEEEE--CcEEC--CCCCCCHHHHHHHHHHHHHHcCCCCCCCCCcccC
Confidence 999999999999999999999999999999 46654 665 799999999999999999999999999865
No 10
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.7e-55 Score=426.56 Aligned_cols=276 Identities=39% Similarity=0.615 Sum_probs=241.2
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|++++.+++.|+++|||+++|||+|+|+ |+ +|++++|++||++||++|+||.| +.+++......++
T Consensus 4 ~~~~g~~~~~~~~~~~~~~~~~~~g~~vFE~~r~~~---g~--~~~l~~H~~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~ 78 (284)
T COG0115 4 IWVNGELVPEEDAKLSVLDRGLHYGDGVFETLRAYN---GK--LFRLDEHLARLKRSAKRLGLPRPESEEEIELLIQLLL 78 (284)
T ss_pred EeECCEEccCcccccCcccceeccccceeEEEEEeC---Cc--ccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 699999999999999999999999999999999995 54 89999999999999999999998 5555555555555
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-C--cccEEEEeeccccccCCCCCCCcCcc
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-G--LAPLNLYVEDEFHRATPGGAGGVKAI 240 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~-G--~~pv~l~v~~~~~R~~p~g~g~~K~~ 240 (391)
+.+ .|.+ .+|+||++++++..+|+.+..++.+.++++|+++|++ + .+++.+.+. +..|..|.+++..|.+
T Consensus 79 ~~~-~~~~-----~~y~r~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~k~ 151 (284)
T COG0115 79 AKN-NLVP-----GLYIRPLVRGGGGGLGVRDATEPTLIVAASPVGAYLKGGRLEKGVVLVIS-SPVRRAPPGPGAAKKT 151 (284)
T ss_pred Hhh-CCCC-----ceEEEEEEEeecCCCCcCCCCccEEEEEEEecccccCcccccCCeEEEEe-ehhhccCCCcchhhhh
Confidence 544 3432 3999999999998899988778999999999999987 4 257666665 3455555545554555
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEe-CCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEE
Q 016343 241 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK-GNIISTPATSGTILAGITRKSIIEIASDCGFQVEE 319 (391)
Q Consensus 241 ~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~-~~~l~TP~l~~~iL~GITR~silela~~~G~~V~E 319 (391)
+||+.+++++++|+++|+||+|++|. +|+|+|++++|+|+++ |++++||+++.+||+||||+++|++|+++|++|+|
T Consensus 152 ~~y~~~~~a~~~A~~~G~~eal~~~~--~G~V~Eg~~sNvf~v~~dg~~~TP~~~~~iL~GitR~~li~la~~~G~~v~E 229 (284)
T COG0115 152 GNYLSSVLAKREAKAAGADEALLLDE--DGYVTEGAGSNVFFVKGDGVLVTPPLSGGILPGITRDSLLELAKELGLTVEE 229 (284)
T ss_pred cccHHHHHHHHHHHHCCCCEEEEecC--CCeEEEcCcceEEEEEECCEEECCCCCCCccccHHHHHHHHHHHHcCceEEE
Confidence 69999999999999999999999997 7999999999999999 88999999999999999999999999999999999
Q ss_pred EeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHhhhccCC
Q 016343 320 RAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLI 380 (391)
Q Consensus 320 r~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~iq~g~~ 380 (391)
++|+.+||.+|||+|+|||+++|+||.+| +++ . ..+||+|++|++.|.++|+|..
T Consensus 230 ~~i~~~~l~~adevf~t~t~~~v~PV~~i--~~~-~---~~~gpit~~l~~~~~~~~~~~~ 284 (284)
T COG0115 230 RPITLEDLKQADEVFLTNTAAGVTPVGLI--DGR-V---GQPGPVTKKLRELLTDIQYGEI 284 (284)
T ss_pred eecCHHHHhhCCEEEEEccceEEEEEEEE--CCc-c---CCCChHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999 344 2 2389999999999999999863
No 11
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate. The enzyme requires pyridoxal 5'-phosphate (PLP) as a cofactor to catalyze the reaction. It has been found that mammals have two foms of the enzyme - mitochondrial and cytosolic forms while bacteria contain only one form of the enzyme. The mitochondrial form plays a significant role in skeletal muscle glutamine and alanine synthesis and in interorgan nitrogen metabolism.Members of this subgroup are widely distributed in all three forms of life.
Probab=100.00 E-value=1.6e-54 Score=420.19 Aligned_cols=276 Identities=50% Similarity=0.829 Sum_probs=243.0
Q ss_pred eeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCcc
Q 016343 98 ELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGS 177 (391)
Q Consensus 98 ~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~ 177 (391)
++++.|++|+||||||||+|+|+..||+.++|++++|++||.+||++|+|+.++.+.|.+.+.++++.|..|.|..+...
T Consensus 1 ~i~~~drg~~yGdgvFEtir~~~~~~g~g~~~~l~~Hl~RL~~sa~~l~i~~~~~~~l~~~i~~~i~~~~~~~~~~~~~~ 80 (279)
T cd01557 1 SLHPATHALHYGQAVFEGLKAYRTPDGKIVLFRPDENAERLNRSARRLGLPPFSVEEFIDAIKELVKLDADWVPYGGGAS 80 (279)
T ss_pred CcCccccHhhcChhheeeEEEEecCCCCEeEECHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCC
Confidence 47899999999999999999997666665689999999999999999999966999999999999999998877655567
Q ss_pred EEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-CcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhC
Q 016343 178 LYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-GLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNR 256 (391)
Q Consensus 178 lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~ 256 (391)
.|||+.++++...+|+.++.++++++++.|.++++. ..+++++.+. ++.|..|...+.+|+..||+.+++++++|+++
T Consensus 81 ~~ir~~v~rg~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~gv~l~~~-~~~r~~~~~~~~~K~~~nyl~~vla~~eA~~~ 159 (279)
T cd01557 81 LYIRPFIFGTDPQLGVSPALEYLFAVFASPVGAYFKGGEKGVSALVS-SFRRAAPGGPGAAKAGGNYAASLLAQKEAAEK 159 (279)
T ss_pred EEEEEEEEeccccCCcCCCCccEEEEEEEEccccccCCCCCeEEEEe-eEEcCCCCCCcccchhhccHHHHHHHHHHHHC
Confidence 899998876655677776566788888888876653 3357777766 57788887777899866999999999999999
Q ss_pred CCceEEEEeCCCC-CeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEE
Q 016343 257 GFSDVLYLDSVNK-KNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFC 335 (391)
Q Consensus 257 G~dd~L~ld~~~~-g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~ 335 (391)
|+||+|++|. + |+|+|++++|+|++++++|+||+++.++|+||||+.|+++|+++|++|+|++++++||.+|||+|+
T Consensus 160 g~de~l~ld~--~~g~v~E~~~sNlf~v~~~~l~TP~~~~~~L~Gitr~~v~~~~~~~Gi~v~e~~i~~~~l~~ade~f~ 237 (279)
T cd01557 160 GYDQALWLDG--AHGYVAEVGTMNIFFVKDGELITPPLDGSILPGITRDSILELARDLGIKVEERPITRDELYEADEVFA 237 (279)
T ss_pred CCCEEEEEcC--CCCEEEEeCcEEEEEEECCEEEcCCCcCCCCCchHHHHHHHHHHHcCCeEEEEeCCHHHHhhCCEEEE
Confidence 9999999997 6 999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred EcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhcc
Q 016343 336 TGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTG 378 (391)
Q Consensus 336 tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g 378 (391)
|||+.+|+||.+| +++.+.++++ +||++++|++.|.++++|
T Consensus 238 ~ns~~gi~pV~~i--~~~~~~~~~~~~gp~~~~l~~~~~~~~~~ 279 (279)
T cd01557 238 TGTAAVVTPVGEI--DYRGKEPGEGEVGPVTKKLYDLLTDIQYG 279 (279)
T ss_pred ecceeEEEEEEEE--ccccccCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999 4555423444 799999999999998876
No 12
>PRK12479 branched-chain amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.2e-53 Score=416.06 Aligned_cols=275 Identities=27% Similarity=0.403 Sum_probs=238.3
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|.+++.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.| +.+++.+.+.+++
T Consensus 6 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i 80 (299)
T PRK12479 6 IYMNGEFVEKEKAVVSVYDHGFLYGDGVFEGIRSY---GGN--VFCLKEHVKRLYESAKSILLTIPLTVDEMEEAVLQTL 80 (299)
T ss_pred EEECCEEeEHHHCccccccchhheeeeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 566 78899999999999999999876 7999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC-C-cccEEEEeeccccccCCCCC-CCcC
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK-G-LAPLNLYVEDEFHRATPGGA-GGVK 238 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~-G-~~pv~l~v~~~~~R~~p~g~-g~~K 238 (391)
+.+.. ...|||+.+..+++.+|+.+. .+++++|++.|.+.+.. . .+++++.+. .+.|..|..+ ..+|
T Consensus 81 ~~~~~-------~~~~ir~~v~rg~g~~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~-~~~r~~~~~~~~~~K 152 (299)
T PRK12479 81 QKNEY-------ADAYIRLIVSRGKGDLGLDPRSCVKPSVIIIAEQLKLFPQEFYDNGLSVVSV-ASRRNTPDALDPRIK 152 (299)
T ss_pred HHcCC-------CCeEEEEEEEecCCCCCCCCccCCCceEEEEEEEcccCChhHHhCCeEEEEE-eEeccCCCccCccch
Confidence 98752 356999888765556777654 34578888888653321 0 135566555 4677777655 5899
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEE
Q 016343 239 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 318 (391)
Q Consensus 239 ~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~ 318 (391)
+. ||+.+++++++|+++|+||+||+|. +|+|+|++++|+|++++++|+||+++.++|+||||+.|+++++++|++|+
T Consensus 153 ~~-nyl~~vla~~ea~~~g~de~l~ld~--~g~v~E~s~sNlf~v~~~~l~TP~l~~giL~GItR~~il~~~~~~g~~v~ 229 (299)
T PRK12479 153 SM-NYLNNVLVKIEAAQAGVLEALMLNQ--QGYVCEGSGDNVFVVKDGKVLTPPSYLGALEGITRNSVIELCERLSIPCE 229 (299)
T ss_pred hh-hhHHHHHHHHHHHHcCCCEEEEEcC--CCcEEECCceEEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHcCCeEE
Confidence 96 9999999999999999999999997 79999999999999999999999999999999999999999999999999
Q ss_pred EEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhccC
Q 016343 319 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGL 379 (391)
Q Consensus 319 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g~ 379 (391)
|+.|+++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+...+.
T Consensus 230 e~~i~~~~L~~adevfltnS~~gi~PV~~i--d~~~~--~~~~~g~~~~~l~~~~~~~~~~~ 287 (299)
T PRK12479 230 ERPFTRHDVYVADEVFLTGTAAELIPVVKV--DSREI--GDGKPGSVTKQLTEEFKKLTRER 287 (299)
T ss_pred EEeCCHHHHHhCCeeeeecCcccEEEEEEE--CCEEc--CCCCcCHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999 56665 655 7999999999998766553
No 13
>PRK07544 branched-chain amino acid aminotransferase; Validated
Probab=100.00 E-value=2.5e-53 Score=414.16 Aligned_cols=274 Identities=28% Similarity=0.462 Sum_probs=235.5
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|.+++.+++.|++|+||||+|||+|+| +|+ +|++++|++||++||++|+||.+ +.+.+.+.+.+++
T Consensus 11 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~~i 85 (292)
T PRK07544 11 IWMDGELVPWRDAKVHVLTHGLHYASSVFEGERAY---GGK--IFKLREHSERLRRSAELLDFEIPYSVAEIDAAKKETL 85 (292)
T ss_pred EEECCEEEEhHHCccChhhhHhhhcceeEEeeEee---CCc--ccChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 566 78899999999999999999976 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCCC-CcEEEEEEeeCCCcC--C-CcccEEEEeeccccccCCCCC-CCcC
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYF--K-GLAPLNLYVEDEFHRATPGGA-GGVK 238 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~-~~~~~v~~~P~~~y~--~-G~~pv~l~v~~~~~R~~p~g~-g~~K 238 (391)
+.+.. ...|||++++.+.+.+|+.++. ...++|...|.++++ . +.+++++.++ ++.|..|..+ +.+|
T Consensus 86 ~~~~~-------~~~~ir~~v~rg~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~gv~l~~~-~~~r~~~~~~~~~~k 157 (292)
T PRK07544 86 AANGL-------TDAYVRPVAWRGSEMMGVSAQQNKIHLAIAAWEWPSYFDPEAKMKGIRLDIA-KWRRPDPETAPSAAK 157 (292)
T ss_pred HhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEeccccccCccccCCCEEEEEe-EEEcCCCCCcCHhhh
Confidence 98852 3569998877555556776543 345666666655433 2 3467888766 4677766654 4679
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEE
Q 016343 239 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 318 (391)
Q Consensus 239 ~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~ 318 (391)
+.|||+.+++++++|+++|+||+|++|. +|+|+|++++|+|+++|++|+||+++ ++|+||||+.|+++|+++|++|+
T Consensus 158 ~~~~yl~~vla~~~A~~~G~deal~ld~--~g~V~E~~~sNlf~v~~~~l~TP~~~-~~L~GItR~~vl~~a~~~g~~v~ 234 (292)
T PRK07544 158 AAGLYMICTISKHAAEAKGYADALMLDY--RGYVAEATGANIFFVKDGVIHTPTPD-CFLDGITRQTVIELAKRRGIEVV 234 (292)
T ss_pred hhcccHHHHHHHHHHHHcCCCeEEEECC--CCCEEEcCceEEEEEECCEEECCCCc-ccccchhHHHHHHHHHHcCCeEE
Confidence 8889999999999999999999999997 79999999999999999999999986 59999999999999999999999
Q ss_pred EEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHhhhccCC
Q 016343 319 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQTGLI 380 (391)
Q Consensus 319 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~iq~g~~ 380 (391)
|++++++||.+|||+|+|||+.+|+||.+|+ ++.+ + +||++++|++.|.+...++.
T Consensus 235 e~~i~~~eL~~adevfltnS~~gi~PV~~i~--~~~~--~--~g~~~~~l~~~~~~~~~~~~ 290 (292)
T PRK07544 235 ERHIMPEELAGFSECFLTGTAAEVTPVSEIG--EYRF--T--PGAITRDLMDDYEALVRPRA 290 (292)
T ss_pred EEecCHHHHhhcCceeecCccceEEEEEEEe--eEEe--C--CChHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999994 5555 3 68999999999987665543
No 14
>PRK08320 branched-chain amino acid aminotransferase; Reviewed
Probab=100.00 E-value=8e-53 Score=409.64 Aligned_cols=272 Identities=31% Similarity=0.469 Sum_probs=234.7
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||++++..++.+++.|++|+||||+||||+++ +|+ +|++++|++||.+||++|+|+.| +.+.+.+.+.+++
T Consensus 5 ~~~nG~~~~~~~~~i~~~drg~~~GdgvFEt~~v~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~~i 79 (288)
T PRK08320 5 IYLNGEFVPKEEAKVSVFDHGFLYGDGVFEGIRAY---NGR--VFRLKEHIDRLYDSAKAIMLEIPLSKEEMTEIVLETL 79 (288)
T ss_pred EEECCEEEEHHHCcccccchhhhhcceEEEEEEEE---CCE--eecHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999997 666 77899999999999999999776 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC--CcccEEEEeeccccccCCCCC-CCcC
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK--GLAPLNLYVEDEFHRATPGGA-GGVK 238 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~--G~~pv~l~v~~~~~R~~p~g~-g~~K 238 (391)
+.+.. ...+||+.++++.+.+|+.+. .++.+++++.|.+++.. -.+++++... .+.|..+..+ ..+|
T Consensus 80 ~~~~~-------~~~~iri~v~rg~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~r~~~~~~~~~~K 151 (288)
T PRK08320 80 RKNNL-------RDAYIRLVVSRGVGDLGLDPRKCPKPTVVCIAEPIGLYPGELYEKGLKVITV-STRRNRPDALSPQVK 151 (288)
T ss_pred HhcCC-------CCEEEEEEEEECCCcCCCCcccCCCceEEEEEEEcCcCChhHHhcCeEEEEE-eeeccCCCCcCccch
Confidence 98752 357899888765556777664 35567777777654431 1135555544 3567666554 6899
Q ss_pred ccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEE
Q 016343 239 AISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVE 318 (391)
Q Consensus 239 ~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~ 318 (391)
+. ||+.+++++++|+++||||+|++|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|+++|++|+
T Consensus 152 ~~-nyl~~v~a~~~A~~~g~de~L~ld~--~g~v~E~s~sNlf~~~~~~l~TP~~~~~~L~GitR~~ll~~~~~~g~~v~ 228 (288)
T PRK08320 152 SL-NYLNNILAKIEANLAGVDEAIMLND--EGYVAEGTGDNIFIVKNGKLITPPTYAGALEGITRNAVIEIAKELGIPVR 228 (288)
T ss_pred hh-hhHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCcEEEEEEECCEEECCCCcCCCCcCHHHHHHHHHHHHcCCeEE
Confidence 96 9999999999999999999999997 79999999999999999999999999999999999999999999999999
Q ss_pred EEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhh
Q 016343 319 ERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQ 376 (391)
Q Consensus 319 Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq 376 (391)
|+.++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+..
T Consensus 229 e~~l~~~dL~~ade~f~~ns~~gv~pV~~i--~~~~~--~~~~~g~~~~~l~~~~~~~~ 283 (288)
T PRK08320 229 EELFTLHDLYTADEVFLTGTAAEVIPVVKV--DGRVI--GDGKPGPITKKLLEEFRELT 283 (288)
T ss_pred EEECCHHHHHhCCEEEEecChhhEEEEEEE--CCEEC--CCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 46654 655 7999999999997654
No 15
>PRK13356 aminotransferase; Provisional
Probab=100.00 E-value=1.5e-52 Score=407.62 Aligned_cols=269 Identities=26% Similarity=0.399 Sum_probs=227.3
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||++++.+.+.+++.|++|+||||+|||+|+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.+.+++
T Consensus 9 ~~~nG~~~~~~~~~i~~~drg~~yGdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~i 83 (286)
T PRK13356 9 TFFDGEWHEGNVPIMGPADHAAWLGSTVFDGARAF---EGV--TPDLDLHCARVNRSAEALGLKPTVSAEEIEALAREGL 83 (286)
T ss_pred EEECCEEcchhhcccccccchhhhcceeEEEEEEe---cCC--CCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 555 67899999999999999999865 7999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEcc-CCcccccCC-CCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCC-CCcCcc
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGS-GPILGLAPA-PEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGA-GGVKAI 240 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~-~~~lg~~p~-~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~-g~~K~~ 240 (391)
+.+.. ....|||+++..+ +...|+.++ ....+.+...+.+.... +++++.++ ++.|..+... +.+|+.
T Consensus 84 ~~~~~------~~~~~ir~~v~rg~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~gv~l~~~-~~~r~~~~~~~~~~K~~ 154 (286)
T PRK13356 84 KRFDP------DTALYIRPMYWAEDGFASGVAPDPESTRFALCLEEAPMPEP--TGFSLTLS-PFRRPTLEMAPTDAKAG 154 (286)
T ss_pred HHcCC------CCcEEEEEEEEeccCcccCcCCCcCCceEEEEEEccCCCCC--CcEEEEEe-eeecCCCCCCCccceec
Confidence 98752 2357999877644 332244333 23344444444432222 46777765 4677666543 678988
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEE
Q 016343 241 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 320 (391)
Q Consensus 241 ~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er 320 (391)
+||+.+++++++|+++|+||+||+|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|++.|++|+|+
T Consensus 155 ~nyl~~vla~~ea~~~g~deal~ld~--~G~v~E~~~sNlf~v~~~~l~TP~~~~~~L~GItR~~vi~~a~~~gi~v~e~ 232 (286)
T PRK13356 155 CLYPNNARALREARSRGFDNALVLDM--LGNVAETATSNVFMVKDGVVFTPVPNGTFLNGITRQRVIALLREDGVTVVET 232 (286)
T ss_pred cchHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCceEEEEEECCEEEcCCCCCCcccCHHHHHHHHHHHHcCCeEEEE
Confidence 89999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred eeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHhh
Q 016343 321 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGI 375 (391)
Q Consensus 321 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~i 375 (391)
+++++||.+|||+|+|||+.+|+||.+| +++.+ + +||++++|++.|.+.
T Consensus 233 ~i~~~eL~~adevfltns~~gi~PV~~i--d~~~~--~--~g~~~~~l~~~~~~~ 281 (286)
T PRK13356 233 TLTYEDFLEADEVFSTGNYSKVVPVTRF--DDRSL--Q--PGPVTRRARELYWDW 281 (286)
T ss_pred ecCHHHHHhcCceEEecChheEEEEEEE--CCEEe--c--CChHHHHHHHHHHHH
Confidence 9999999999999999999999999999 57665 3 589999999999754
No 16
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.
Probab=100.00 E-value=3e-52 Score=401.64 Aligned_cols=264 Identities=28% Similarity=0.429 Sum_probs=224.5
Q ss_pred EecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHH
Q 016343 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTAL 164 (391)
Q Consensus 86 w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv~ 164 (391)
|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+||.+ +.+.+.+.+.++++
T Consensus 1 ~~nG~~~~~~~~~i~~~d~g~~~G~gvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~~ 75 (270)
T cd01558 1 YLNGEYVPREEAKVSVFDRGFLFGDGVYEVIRVY---NGK--PFALDEHLDRLYRSAKELRIDIPYTREELKELIRELVA 75 (270)
T ss_pred CcCCeEeEHHHCccccccchhcccceEEEEEEEE---CCE--EecHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999998 566 78899999999999999999865 79999999999999
Q ss_pred HcCCCCCCCCCccEEEEEEEEccCCcccccC--CCCcEEEEEEeeCCCcCC--CcccEEEEeeccccccCCCCCCCcCcc
Q 016343 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAP--APEYTFLVFASPVGNYFK--GLAPLNLYVEDEFHRATPGGAGGVKAI 240 (391)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p--~~~~~~~v~~~P~~~y~~--G~~pv~l~v~~~~~R~~p~g~g~~K~~ 240 (391)
.+.. ..+.+|+|+ .+|.++ .|+.+ ...+.++++..|.++++. -.+++++.+.+ +.|. ..+++|+.
T Consensus 76 ~~~~-----~~~~~~~~~-t~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~~~~~~-~~~~---~~~~~K~~ 144 (270)
T cd01558 76 KNEG-----GEGDVYIQV-TRGVGP-RGHDFPKCVKPTVVIITQPLPLPPAELLEKGVRVITVP-DIRW---LRCDIKSL 144 (270)
T ss_pred HcCC-----CCceEEEEE-EeCCCc-cCCCCCCCCCCEEEEEEEecCCCChhhhhcCeEEEEec-cccc---CCCCchhh
Confidence 8752 245788886 556553 34444 234567777777754321 12456666553 3343 34589996
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEE
Q 016343 241 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 320 (391)
Q Consensus 241 ~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er 320 (391)
||+.+++++++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.++|+||||+.|+++|+++|++|+|+
T Consensus 145 -ny~~~~~a~~~a~~~g~de~l~ld~--~g~v~E~~~sNif~~~~~~l~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e~ 221 (270)
T cd01558 145 -NLLNNVLAKQEAKEAGADEAILLDA--DGLVTEGSSSNVFIVKNGVLVTPPLDNGILPGITRATVIELAKELGIPVEER 221 (270)
T ss_pred -ccHHHHHHHHHHHHcCCCEEEEEcC--CCEEEEcCcEEEEEEECCEEECCCCcCCCCCChHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred eeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHH
Q 016343 321 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTL 372 (391)
Q Consensus 321 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l 372 (391)
.|+++||.+|||+|+|||+++|+||.+| ++..+ +++ .||++++|++.|
T Consensus 222 ~i~~~eL~~ade~fl~ns~~gv~PV~~i--~~~~~--~~~~~~~~~~~l~~~~ 270 (270)
T cd01558 222 PFSLEELYTADEVFLTSTTAEVMPVVEI--DGRPI--GDGKPGPVTKRLREAY 270 (270)
T ss_pred eCCHHHHhhCCEEEEecCcccEEEEEEE--CCeEC--CCCCCCHHHHHHHHhC
Confidence 9999999999999999999999999999 46654 555 799999998754
No 17
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=1e-51 Score=401.08 Aligned_cols=270 Identities=24% Similarity=0.336 Sum_probs=231.7
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+||.+ +.+.+.+.+.+++
T Consensus 2 ~~~nG~~~~~~~~~v~~~drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~l~~~~ 76 (283)
T PRK07650 2 IYVNGQYVEEEEARISPFDHGYLYGLGVFETFRIY---NGH--PFLLDDHYDRLNDALDTLQIEWTMTKDEVLLILKNLL 76 (283)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EEcHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 59999999999999999999999999999999998 676 67799999999999999999976 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC--CcccEEEEeeccccccCCCCCCCcCc
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK--GLAPLNLYVEDEFHRATPGGAGGVKA 239 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~--G~~pv~l~v~~~~~R~~p~g~g~~K~ 239 (391)
+.+.. ...|||+.+..+.+.+|+.+. ..+.++++..|.++... +..++.+ .+.|..|....++|+
T Consensus 77 ~~~~~-------~~~~iRl~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Kt 145 (283)
T PRK07650 77 EKNGL-------ENAYVRFNVSAGIGEIGLQTEMYEEPTVIVYMKPLAPPGLPAEKEGVVL----KQRRNTPEGAFRLKS 145 (283)
T ss_pred HhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEEcCCCCChhhcCeEEEE----EEEecCCCCCcchhH
Confidence 88752 357899887655444566543 35678888888754221 2222222 345666777889999
Q ss_pred cCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEE
Q 016343 240 ISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEE 319 (391)
Q Consensus 240 ~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~E 319 (391)
. ||..+++++++|++.|+||+|++|. +|+|+|++++|||++++|+|+||+++.|+|+||||+.++++|++.|++|+|
T Consensus 146 ~-~y~~~v~a~~~a~~~g~de~llln~--~G~v~E~s~sNif~v~~g~l~TP~l~~g~L~GitR~~li~~~~~~g~~v~e 222 (283)
T PRK07650 146 H-HYLNNILGKREIGNDPNKEGIFLTE--EGYVAEGIVSNLFWVKGDIVYTPSLETGILNGITRAFVIKVLEELGIEVKE 222 (283)
T ss_pred H-hHHHHHHHHHHHHHcCCCeEEEECC--CCeEEEcCceEEEEEECCEEEcCCCcCCCcccHHHHHHHHHHHHcCCeEEE
Confidence 6 9999999999999999999999997 799999999999999999999999999999999999999999999999999
Q ss_pred EeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHhhhc
Q 016343 320 RAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQT 377 (391)
Q Consensus 320 r~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~iq~ 377 (391)
+.++++||.+|||+|+|||+++|+||.+| +++.+ ++.+||++++|+++|.+...
T Consensus 223 ~~i~~~dL~~adeifl~ns~~gv~pV~~i--~~~~~--~g~~g~~~~~l~~~~~~~~~ 276 (283)
T PRK07650 223 GFYTKEELLSADEVFVTNSIQEIVPLTRI--EERDF--PGKVGMVTKRLQNLYEMQRE 276 (283)
T ss_pred EecCHHHHhhCCEeeeecCcccEEEEEEE--CCEEe--CCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 56665 43389999999999976443
No 18
>PRK06680 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=3.5e-51 Score=398.03 Aligned_cols=270 Identities=23% Similarity=0.356 Sum_probs=226.1
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|..++.+++.|++|+||||+|||||+| +|+ +|++++|++||.+||++|+||.+ +.+.+.+.+.+++
T Consensus 5 ~~~nG~~~~~~~~~i~~~drg~~yGdGvFEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~L~i~~~~~~~~l~~~i~~~~ 79 (286)
T PRK06680 5 AYVNGRYVNHREARVHIEDRGFQFADGIYEVCAVR---DGK--LVDLDRHLARLFRSLGEIRIAPPMTRAELVEVLRELI 79 (286)
T ss_pred EEECCEEEEHHHCcccccccccceeeEEEEEEEEE---CCE--EechHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999998 676 67789999999999999999976 7899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCccccc-C--CCCcEEEEEEeeCCCcCC---CcccEEEEeeccccccCCCCCCCc
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLA-P--APEYTFLVFASPVGNYFK---GLAPLNLYVEDEFHRATPGGAGGV 237 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~-p--~~~~~~~v~~~P~~~y~~---G~~pv~l~v~~~~~R~~p~g~g~~ 237 (391)
+.+.. ..+.+|+++ .+|.++ .|.. + ..++.++|++.|.++|.. -.+++++.+.+. .| ....++
T Consensus 80 ~~~~~-----~~~~lr~~v-trG~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~gv~~~~~~~-~~---~~~~~~ 148 (286)
T PRK06680 80 RRNRV-----REGLVYLQV-TRGVAR-RDHVFPAADVKPSVVVFAKSVDFARPAAAAETGIKVITVPD-NR---WKRCDI 148 (286)
T ss_pred HHcCC-----CceEEEEEE-EeCCCC-CCCCCCCCCCCcEEEEEEEeccccCChhHHhCCeEEEEecC-CC---CCCCCc
Confidence 98752 233445542 345443 3333 3 245678888888775321 124565655432 22 234579
Q ss_pred CccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEE-eCCEEEccCCCCCccccHHHHHHHHHHHHCCCc
Q 016343 238 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFIL-KGNIISTPATSGTILAGITRKSIIEIASDCGFQ 316 (391)
Q Consensus 238 K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v-~~~~l~TP~l~~~iL~GITR~silela~~~G~~ 316 (391)
|+. ||+.+++++++|+++|+||+|++| +|+|+|++++|||++ ++++|+|||++.+||+||||++++++|+++|++
T Consensus 149 Ks~-nyl~~vla~~eA~~~g~dd~l~ld---~g~v~E~~~sN~f~~~~~~~l~TP~~~~~iL~Gitr~~il~~a~~~g~~ 224 (286)
T PRK06680 149 KSV-GLLPNVLAKQAAKEAGAQEAWMVD---DGFVTEGASSNAWIVTKDGKLVTRPADNFILPGITRHTLIDLAKELGLE 224 (286)
T ss_pred chh-ccHHHHHHHHHHHHCCCCEEEEec---CCEEEEcCcEEEEEEEECCEEEeCCCCCCCCcCHHHHHHHHHHHHcCCe
Confidence 997 899999999999999999999998 489999999999999 999999999999999999999999999999999
Q ss_pred EEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhcc
Q 016343 317 VEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTG 378 (391)
Q Consensus 317 V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g 378 (391)
|+|++++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+...+
T Consensus 225 v~e~~i~~~el~~ade~f~~ns~~gi~pV~~i--d~~~~--~~~~~g~~~~~L~~~~~~~~~~ 283 (286)
T PRK06680 225 VEERPFTLQEAYAAREAFITAASSFVFPVVQI--DGKQI--GNGKPGPIAKRLREAYEEFARL 283 (286)
T ss_pred EEEEcCCHHHHhcCcEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999 46654 555 799999999999775543
No 19
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase. Specificity is broad for various D-amino acids, and differs among members of the family; the family is designated equivalog, but with this caveat attached.
Probab=100.00 E-value=1e-50 Score=392.77 Aligned_cols=266 Identities=23% Similarity=0.358 Sum_probs=217.5
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|.+++.+++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.+ +.+.+.+.|.+++
T Consensus 2 ~~~nG~~~~~~~~~i~~~drgl~yGdgvFEtir~~---~g~--~~~l~~H~~RL~~Sa~~l~i~~~~~~~~l~~~i~~~~ 76 (276)
T TIGR01121 2 VLWNGQLVEREEAKIDIEDRGYQFGDGVYEVIRVY---NGK--LFTVNEHIDRLYASAAKIRIDIPYTKEELHQLLHELV 76 (276)
T ss_pred EEECCEEeEHHHCeecccccccccccEEEEEEEEE---CCE--EeChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 59999999999999999999999999999999998 565 78899999999999999999875 7999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCccccc-CC--CCcEEEEEEeeCCCcCC-CcccEEEEeeccccccCCCCCCCcCc
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLA-PA--PEYTFLVFASPVGNYFK-GLAPLNLYVEDEFHRATPGGAGGVKA 239 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~-p~--~~~~~~v~~~P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~ 239 (391)
+.+.. ..+.+|+.+ ..|.++ .|.. |. ....++++..|.++.+. -.+++++..... .|. ..+++|+
T Consensus 77 ~~~~~-----~~~~irl~~-~rg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~-~~~---~~~~~K~ 145 (276)
T TIGR01121 77 EKNNL-----NTGHVYFQV-TRGVAP-RNHQFPAGTVKPVITAYTKEVPRPEENLEKGVKAITVED-IRW---LRCDIKS 145 (276)
T ss_pred HhcCC-----CceEEEEEE-EcCCCC-cCCCCCCCCCCcEEEEEEecccCChhHHhcCeEEEEecC-CCc---cCCCcch
Confidence 98752 223444432 234332 2333 22 23456666666542211 013454443322 221 2367998
Q ss_pred cCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEE
Q 016343 240 ISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEE 319 (391)
Q Consensus 240 ~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~E 319 (391)
. ||+.+++++++|++.|+||+|+++ +|+|+|++++|||++++++|+|||+++++|+||||+.|+++|+++|++|+|
T Consensus 146 ~-nyl~~vla~~eA~~~g~de~l~~~---~g~v~E~~~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~a~~~g~~v~e 221 (276)
T TIGR01121 146 L-NLLGNVLAKQEAHEKGAYEAILHR---GGTVTEGSSSNVYGIKDGVLYTHPANNLILNGITRMVILACAEENGIPVKE 221 (276)
T ss_pred h-hhHHHHHHHHHHHHcCCCEEEEec---CCeEEecCceeEEEEECCEEEeCCCcCCCCcCHHHHHHHHHHHHCCCeEEE
Confidence 6 999999999999999999999995 589999999999999999999999999999999999999999999999999
Q ss_pred EeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHh
Q 016343 320 RAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVG 374 (391)
Q Consensus 320 r~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~ 374 (391)
++|+++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+
T Consensus 222 ~~i~~~el~~ade~fltns~~gi~PV~~i--d~~~~--~~~~~g~~~~~L~~~~~~ 273 (276)
T TIGR01121 222 EPFTKEELLNADEVFVSSTTAEITPVIEI--DGQQI--GDGKPGPWTRQLQKAFEE 273 (276)
T ss_pred EeCCHHHHhcCCEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999 45554 665 79999999999864
No 20
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein
Probab=100.00 E-value=9.1e-51 Score=403.31 Aligned_cols=272 Identities=22% Similarity=0.290 Sum_probs=227.5
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|.+++.|++.|++|+||||+|||||++ +|+ +|++++|++||.+||++|+|+.+ +.+++.+.+.+++
T Consensus 43 ~~~nG~~v~~~~a~i~~~Drgl~~GdGvFETirv~---~G~--~~~le~Hl~RL~~Sa~~L~i~~p~~~~~l~~~i~~~i 117 (336)
T PLN02845 43 SVVGGITTDPAAMVIPLDDHMVHRGHGVFDTATIR---DGH--LYELDAHLDRFLRSAAKAKIPLPFDRATLRRILLQTV 117 (336)
T ss_pred EEECCEEccHHHCcccccccceeecceEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHH
Confidence 69999999999999999999999999999999997 676 78899999999999999999876 8899999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccC--CCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccC
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAP--APEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAIS 241 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p--~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~ 241 (391)
+.+.. ...+||+.+..+.+.+++.+ ...++++++..|.+.+....+++++.+.+ +.|. +..+.++|+.
T Consensus 118 ~~~~~-------~~~~irl~vtrG~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~gv~l~~~~-~~~~-~~~~~~~Kt~- 187 (336)
T PLN02845 118 AASGC-------RNGSLRYWLSAGPGGFSLSPSGCSEPAFYAVVIEDTYAQDRPEGVKVVTSS-VPIK-PPQFATVKSV- 187 (336)
T ss_pred HhcCC-------CcEEEEEEEEeCCCCCCCCCCCCCCCEEEEEEccccccccccCCeEEEEee-eeec-CCccccchhh-
Confidence 98752 24577766543223445543 34567778777754322112456666553 4453 3345789986
Q ss_pred ChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEe-CCEEEccCCCCCccccHHHHHHHHHHHHC---C--C
Q 016343 242 NYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK-GNIISTPATSGTILAGITRKSIIEIASDC---G--F 315 (391)
Q Consensus 242 nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~-~~~l~TP~l~~~iL~GITR~silela~~~---G--~ 315 (391)
||+.+++++++|+++|+||+||+|. +|+|+|++++||||++ +++|+||+++ +||+||||+.||++|+++ | +
T Consensus 188 nyl~~vla~~eA~~~G~deaLlln~--~G~V~Egt~sNiF~v~~~~~l~TP~l~-~iL~GItR~~vlela~~~~~~G~~i 264 (336)
T PLN02845 188 NYLPNALSQMEAEERGAFAGIWLDE--EGFVAEGPNMNVAFLTNDGELVLPPFD-KILSGCTARRVLELAPRLVSPGDLR 264 (336)
T ss_pred hhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCcceEEEEEECCEEEeCCCC-CcCccHHHHHHHHHHHhhhccCCce
Confidence 9999999999999999999999997 7999999999999884 9999999997 499999999999999986 8 9
Q ss_pred cEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhcc
Q 016343 316 QVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTG 378 (391)
Q Consensus 316 ~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g 378 (391)
+|+|+.++++||.+|||+|+|||+++|+||.+| +|+.+ +++ +||++++|++.|.+..+.
T Consensus 265 ~V~E~~i~~~eL~~AdEvFltnS~~gv~PV~~i--d~~~~--~~g~~gp~t~~L~~~~~~~~~~ 324 (336)
T PLN02845 265 GVKQRKISVEEAKAADEMMLIGSGVPVLPIVSW--DGQPI--GDGKVGPITLALHDLLLDDMRS 324 (336)
T ss_pred EEEEEecCHHHHhcCCEEEEecCcccEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999 56655 666 899999999999775543
No 21
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional
Probab=100.00 E-value=1.1e-50 Score=395.68 Aligned_cols=266 Identities=22% Similarity=0.286 Sum_probs=224.9
Q ss_pred eEecC-----eeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Q 016343 85 YFEKG-----RLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAV 159 (391)
Q Consensus 85 ~w~~g-----~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i 159 (391)
+|.|| +++|.+++.|++.|++|+||||+|||||++ +|+ +|.+++|++||.+||++|+|+.++.+.|.++|
T Consensus 9 ~~~ng~~~~~~~~~~~~a~i~~~drg~~~GdgvFEt~rv~---~g~--i~~l~~Hl~RL~~Sa~~l~i~~~~~~~l~~~i 83 (292)
T PRK07849 9 VTLDPYGGSERVHDPSAPLLHADDLAAVRGDGVFETLLVR---DGR--PCNLEAHLERLARSAALLDLPEPDLDRWRRAV 83 (292)
T ss_pred EEECCCCccceEechHHCCccchhcchhccceEEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCCCHHHHHHHH
Confidence 79999 999999999999999999999999999997 566 56789999999999999999998889999999
Q ss_pred HHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcC-C-CcccEEEEeecc-----ccccCCC
Q 016343 160 KQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYF-K-GLAPLNLYVEDE-----FHRATPG 232 (391)
Q Consensus 160 ~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~-~-G~~pv~l~v~~~-----~~R~~p~ 232 (391)
.++++.+.. . ....+||+++....... ..+.+++.+.|.+++. . ..+++++.+.+. +.+..|.
T Consensus 84 ~~~v~~~~~---~--~~~~~iRl~v~~g~~~~-----~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~p~ 153 (292)
T PRK07849 84 ELAIEEWRA---P--EDEAALRLVYSRGRESG-----GAPTAWVTVSPVPERVARARREGVSVITLDRGYPSDAAERAPW 153 (292)
T ss_pred HHHHHHhcC---C--CCCeEEEEEEeCCCCCC-----CCCeEEEEEeecCccchhhccCCeEEEEEeccccCcccccCcc
Confidence 999987631 0 13568886654322111 2456778888875432 1 234566766532 1233465
Q ss_pred CCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHH
Q 016343 233 GAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASD 312 (391)
Q Consensus 233 g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~ 312 (391)
.+.++|+. ||..++++.++|+++|+||+|++|. +|+|+|++++|||++++++|+||++++++|+||||+.||++|++
T Consensus 154 ~~~~~Kt~-ny~~~i~a~~~A~~~g~dd~L~ld~--~G~v~E~s~~Nif~~~~g~l~TP~~~~giL~GItR~~vie~~~~ 230 (292)
T PRK07849 154 LLAGAKTL-SYAVNMAALRYAARRGADDVIFTST--DGYVLEGPTSTVVIATDDRLLTPPPWYGILPGTTQAALFEVARE 230 (292)
T ss_pred cccccchh-hhHHHHHHHHHHHHcCCCEEEEEcC--CCcEEECCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHH
Confidence 67889996 9999999999999999999999997 79999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHh
Q 016343 313 CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVG 374 (391)
Q Consensus 313 ~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~ 374 (391)
+|++|+||.|+++||.+|||+|+|||+++|.||.+| +++.+ + .||++++|++.|.+
T Consensus 231 ~g~~v~er~i~~~eL~~Adevfltns~~gi~pV~~i--d~~~~--~--~~~~~~~l~~~~~~ 286 (292)
T PRK07849 231 KGWDCEYRALRPADLFAADGVWLVSSVRLAARVHTL--DGRPL--P--RDPLADELTELVDA 286 (292)
T ss_pred cCCceEEEECCHHHHhhCCEEEEecCcceEEEEEEE--CCEEC--C--CChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 56654 4 47999999999864
No 22
>PRK12400 D-amino acid aminotransferase; Reviewed
Probab=100.00 E-value=1.5e-50 Score=394.35 Aligned_cols=266 Identities=20% Similarity=0.289 Sum_probs=216.8
Q ss_pred eEecCeeecCCC--ceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGK--IELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQ 161 (391)
Q Consensus 85 ~w~~g~i~p~~~--~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~ 161 (391)
.|.||+++|.++ ..|++.|++|+||||||||||+| +|+ +|++++|++||.+||++|+|+.| +.+++.+.+.+
T Consensus 7 ~~~ng~~v~~~~~~~~i~~~drgl~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~l~~~l~~ 81 (290)
T PRK12400 7 VLWNDAVIDTTKQKTYIELEERGLQFGDGVYEVIRLY---KGN--FHLLDPHITRLYRSMEEIELTLPFSKAELITLLYK 81 (290)
T ss_pred EEECCEEechHHcCceeccccchhhhcceEEEEEEEE---CCE--ecccHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHH
Confidence 799999999994 55999999999999999999997 576 66789999999999999999976 78899999999
Q ss_pred HHHHcCCCCCCCCCccEEEEEEEE-ccCCcccccCC--CCcEEEEEEeeCCCcCC-CcccEEEEeeccccccCCCCCCCc
Q 016343 162 TALANKRWVPPPGKGSLYIRPLLV-GSGPILGLAPA--PEYTFLVFASPVGNYFK-GLAPLNLYVEDEFHRATPGGAGGV 237 (391)
Q Consensus 162 lv~~~~~~vp~~~~~~lyIRp~~~-g~~~~lg~~p~--~~~~~~v~~~P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~ 237 (391)
+++.+.. ....+||+.+. |.+ ..|..++ ..++++++..|.+.+.. -.+++++...+. .|....++
T Consensus 82 ~~~~~~~------~~~~~iri~v~rG~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~ 150 (290)
T PRK12400 82 LIENNNF------HEDGTIYLQVSRGVQ-ARTHTFSYDVPPTIYAYITKKERPALWIEYGVRAISEPD----TRWLRCDI 150 (290)
T ss_pred HHHhcCC------CCCEEEEEEEEeCCC-CCCCCCCCCCCcEEEEEEecccCchhHHhcCcEEEECCC----CCccCCCC
Confidence 9998752 12345665544 433 2344432 33456666554322111 123445443321 12234578
Q ss_pred CccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcE
Q 016343 238 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 317 (391)
Q Consensus 238 K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V 317 (391)
|+. ||+.+++++++|++.|+||+|++| +|+|+|++++|||++++++|+|||++.++|+||||+.||++|+++|++|
T Consensus 151 Kt~-nyl~~vla~~ea~~~g~deaL~l~---~g~v~E~t~sNif~v~~~~l~TPpl~~g~L~GItR~~llela~~~gi~v 226 (290)
T PRK12400 151 KSL-NLLPNILAATKAERKGCKEALFVR---NGTVTEGSHSNFFLIKNGTLYTHPANHLILNGIIRQYVLSLAKTLRIPV 226 (290)
T ss_pred ccc-ccHHHHHHHHHHHHcCCCEEEEEc---CCEEEEcCceEEEEEECCEEEeCCCCCCcCcCHHHHHHHHHHHHcCCcE
Confidence 996 999999999999999999999995 5899999999999999999999999999999999999999999999999
Q ss_pred EEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHh
Q 016343 318 EERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVG 374 (391)
Q Consensus 318 ~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~ 374 (391)
+|+.++++||.+|||+|+|||+.+|+||.+| +++.+ +++ +||++++|++.|.+
T Consensus 227 ~E~~i~~~eL~~Adevfltns~~gv~PV~~i--~~~~~--~~~~~g~~t~~l~~~~~~ 280 (290)
T PRK12400 227 QEELFSVRDVYQADECFFTGTTIEILPMTHL--DGTAI--QDGQVGPITKMLQRSFSQ 280 (290)
T ss_pred EEEeCCHHHHHhCCeeeEccCcceEEEEEEE--CCEEC--CCCCcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 46654 665 79999999999865
No 23
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase. Members of this protein family are aminodeoxychorismate lyase (ADC lyase), EC 4.1.3.38, the PabC protein of PABA biosynthesis. PABA (para-aminobenzoate) is a precursor of folate, needed for de novo purine biosynthesis. This enzyme is a pyridoxal-phosphate-binding protein in the class IV aminotransferase family (pfam01063).
Probab=100.00 E-value=6.7e-50 Score=383.69 Aligned_cols=256 Identities=27% Similarity=0.370 Sum_probs=215.3
Q ss_pred EecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Q 016343 86 FEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALA 165 (391)
Q Consensus 86 w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~ 165 (391)
|.||+. ++.+++.|++|+||+|+|||||++ +|+ +|++++|++||.+||+.|+||.|+.+.+.+.+.++++.
T Consensus 1 ~~nG~~----~~~i~~~d~g~~~G~gvFEt~r~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~~~~~~~~ 71 (261)
T TIGR03461 1 WVNGVL----QTQISVSDRGLQYGDGCFTTAKVR---NGK--IELLDLHLERLQDAAARLGIPLPDWDALREEMAQLAAG 71 (261)
T ss_pred CcCCcc----cCccCcccccccccceeEEEEEEE---CCE--eccHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHh
Confidence 788984 778999999999999999999997 676 67789999999999999999998899999999999986
Q ss_pred cCCCCCCCCCccEEEEEEEEccCCcccccC--CCCcEEEEEEeeCCCcCC--CcccEEEEeeccccccCCCCCCCcCccC
Q 016343 166 NKRWVPPPGKGSLYIRPLLVGSGPILGLAP--APEYTFLVFASPVGNYFK--GLAPLNLYVEDEFHRATPGGAGGVKAIS 241 (391)
Q Consensus 166 ~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p--~~~~~~~v~~~P~~~y~~--G~~pv~l~v~~~~~R~~p~g~g~~K~~~ 241 (391)
+. ..+||+.+.......|+.+ .....++++..|.++++. ..+++++.+.+ ..+..+..+.++|+.
T Consensus 72 ~~---------~~~ir~~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~Kt~- 140 (261)
T TIGR03461 72 YS---------LGVLKVIISRGSGGRGYSPPGCSDPTRIISVSPYPAHYSAWQQQGIRLGVSP-VRLGRNPLLAGIKHL- 140 (261)
T ss_pred CC---------CeEEEEEEecCCCCCCCCCCCCCCCcEEEEeccCcccChhHhcCCEEEEEec-cccCCCCCCcCcccc-
Confidence 53 3466665543222234433 334567788888765543 12567777764 344444457789996
Q ss_pred ChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEe
Q 016343 242 NYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERA 321 (391)
Q Consensus 242 nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~ 321 (391)
||+.+++++++|+++|+||+|++|. +|+|+|++++|||+++|++|+||+++.++|+||||+.|+++|++.|++|+|+.
T Consensus 141 ~y~~~~~a~~~A~~~g~de~llln~--~g~v~E~s~sNif~~~~~~l~TP~~~~~~L~GItR~~il~~~~~~g~~v~E~~ 218 (261)
T TIGR03461 141 NRLEQVLIKAELENSEADEALVLDT--DGNVVECTAANIFWRKGNQVFTPDLSYCGVAGVMRQHVLALLPALGYEIEEVK 218 (261)
T ss_pred ccHHHHHHHHHhhhcCCCEEEEECC--CCCEEEeccEEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEEe
Confidence 9999999999999999999999997 79999999999999999999999999899999999999999999999999999
Q ss_pred eCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHH
Q 016343 322 IPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELY 369 (391)
Q Consensus 322 i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~ 369 (391)
|+++||.+|||+|+|||+++|+||.+| +++.+ + +||++++|+
T Consensus 219 i~~~eL~~ade~f~~ns~~gi~pV~~i--d~~~~--~--~~~~~~~l~ 260 (261)
T TIGR03461 219 AGLEELLSADEVFITNSLMGVVPVNAI--GETSY--P--SRTLTRLLQ 260 (261)
T ss_pred cCHHHHhhCCEEEEeCCccceEEEEEE--CCEEe--c--chHHHHHhh
Confidence 999999999999999999999999999 56665 4 479998874
No 24
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed
Probab=100.00 E-value=1.2e-49 Score=383.53 Aligned_cols=261 Identities=25% Similarity=0.322 Sum_probs=217.1
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~ 164 (391)
.|.||++ .+.+++.|++|+||||+|||||++ +|+ +|++++|++||.+||++|+||.++.+.+.+.+.+++.
T Consensus 2 ~~~nG~~----~~~i~~~d~g~~~GdgvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~l~~~~~ 72 (268)
T PRK06092 2 FWINGQP----QESLSVSDRSTQYGDGCFTTARVR---DGQ--VSLLSRHLQRLQDACERLAIPLDDWAQLEQEMKQLAA 72 (268)
T ss_pred EEECCcC----cCccCccccccccccceeeEEEEE---CCe--eccHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence 5889985 578999999999999999999997 676 6778999999999999999999877888888887773
Q ss_pred HcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC--CcccEEEEeeccccccCCCCCCCcCcc
Q 016343 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK--GLAPLNLYVEDEFHRATPGGAGGVKAI 240 (391)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~--G~~pv~l~v~~~~~R~~p~g~g~~K~~ 240 (391)
.. ...++|+.+..+....|+.++ ..+.++++..|.+++.. -.+++++.+++. .+..+..+.++|+.
T Consensus 73 ~~---------~~~~iri~v~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~gv~l~~~~~-~~~~~~~~~~~Kt~ 142 (268)
T PRK06092 73 EL---------ENGVLKVIISRGSGGRGYSPAGCAAPTRILSVSPYPAHYSRWREQGITLALCPT-RLGRNPLLAGIKHL 142 (268)
T ss_pred hC---------CCeEEEEEEEccCCCCCCCCCCCCCCeEEEEeccCCccChhHhhCCEEEEEecc-ccCCCCCccCcchh
Confidence 21 234666655433333455543 34578888888775543 125677777653 33333356789995
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEE
Q 016343 241 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 320 (391)
Q Consensus 241 ~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er 320 (391)
||+.+++++++|+++|+||+|++|. +|+|+|++++|||++++++|+||+++.++|+||||+.++++|+++|++|+|+
T Consensus 143 -ny~~~~~a~~~A~~~g~de~l~l~~--~g~v~E~s~sNif~v~~~~~~TP~~~~~~L~GitR~~vl~~~~~~g~~v~e~ 219 (268)
T PRK06092 143 -NRLEQVLIRAELEQTEADEALVLDS--EGWVIECCAANLFWRKGGVVYTPDLDQCGVAGVMRQFILELLAQSGYPVVEV 219 (268)
T ss_pred -hhHHHHHHHHHHHhcCCCEEEEECC--CCCEEEccceEEEEEECCEEECCCccccCcccHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999888999999999999999999999999
Q ss_pred eeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHH
Q 016343 321 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLV 373 (391)
Q Consensus 321 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~ 373 (391)
.|+++||.+|||+|+|||+++|+||.+| +++.+ + +||++++|++.+.
T Consensus 220 ~i~~~dL~~adevfltns~~gi~pV~~i--d~~~~--~--~g~~~~~l~~~~~ 266 (268)
T PRK06092 220 DASLEELLQADEVFICNSLMPVWPVRAI--GETSY--S--SGTLTRYLQPLCE 266 (268)
T ss_pred ECCHHHHhhCCEEEEeCCcceEEEEEEE--CCEEc--c--chHHHHHHHHHHh
Confidence 9999999999999999999999999999 46665 4 5899999998875
No 25
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV). This D-amino acid superfamily, one of five classes of PLPDE, consists of branched-chain amino acid aminotransferases (BCAT), D-amino acid transferases (DAAT), and 4-amino-4-deoxychorismate lyases (ADCL). BCAT catalyzes the reversible transamination reaction between the L-branched-chain amino and alpha-keto acids. DAAT catalyzes the synthesis of D-glutamic acid and D-alanine, and ADCL converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate. Except for a few enzymes, i. e., Escherichia coli and Salmonella BCATs, which are homohexamers arranged as a double trimer, the class IV PLPDEs are homodimers. Homodimer formation is required for catalytic activity.
Probab=100.00 E-value=3.3e-49 Score=376.84 Aligned_cols=251 Identities=44% Similarity=0.665 Sum_probs=215.3
Q ss_pred CccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCC-CCHHHHHHHHHHHHHHcCCCCCCCCCccEEEE
Q 016343 103 SGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPS-PSIDQFIDAVKQTALANKRWVPPPGKGSLYIR 181 (391)
Q Consensus 103 ~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~-~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIR 181 (391)
|++|+||||+||||+++ +|+ +|++++|++||.+||+.|+||. ++.+.+.+.+.++++.+. ....+||
T Consensus 1 drg~~~GdgvFEt~r~~---~g~--~~~l~~Hl~RL~~sa~~l~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~ir 68 (256)
T cd00449 1 DRGLHYGDGVFEGLRAG---KGR--LFRLDEHLDRLNRSAKRLGLPIPYDREELREALKELVAANN-------GASLYIR 68 (256)
T ss_pred CceeeccceEEEEEEEc---CcE--EEChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCC-------CCCEEEE
Confidence 68999999999999995 676 7788999999999999999995 489999999999998764 2467899
Q ss_pred EEEEccCCcccccC--CCCcEEEEEEeeCCCcCC-CcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCC
Q 016343 182 PLLVGSGPILGLAP--APEYTFLVFASPVGNYFK-GLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGF 258 (391)
Q Consensus 182 p~~~g~~~~lg~~p--~~~~~~~v~~~P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~ 258 (391)
+.+.+....+|..+ +.++.+++++.|.+++.. ..+++++.+.+...++.+..+.++|+. ||..++++.++|+++|+
T Consensus 69 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~Kt~-~~~~~~~a~~~a~~~g~ 147 (256)
T cd00449 69 PLLTRGVGGLGVAPPPSPEPTFVVFASPVGAYAKGGEKGVRLITSPDRRRAAPGGTGDAKTG-GNLNSVLAKQEAAEAGA 147 (256)
T ss_pred EEEEecccccCCCCCCCCCcEEEEEEeeccccccccCCCeEEEEeeeEEeCCCCCCccchhh-CCHHHHHHHHHHHHcCC
Confidence 88775554566653 356788888888876511 245777877654333356678899997 78999999999999999
Q ss_pred ceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcC
Q 016343 259 SDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGT 338 (391)
Q Consensus 259 dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgT 338 (391)
||+|++|. +|+|+|++++|+|++++++|+||+++.|+|+||||+.||++|+++|++|+|+.++++||.+|||+|+|||
T Consensus 148 de~llld~--~g~v~E~s~sNlf~~~~~~l~TP~~~~g~L~GitR~~vl~~~~~~g~~v~e~~i~~~dL~~adevfl~ns 225 (256)
T cd00449 148 DEALLLDD--NGYVTEGSASNVFIVKDGELVTPPLDGGILPGITRDSVIELAKELGIKVEERPISLDELYAADEVFLTGT 225 (256)
T ss_pred CEEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCcCcchhHHHHHHHHHHcCCeEEEEecCHHHHhhCCEEEEccc
Confidence 99999997 6999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHH
Q 016343 339 AVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTL 372 (391)
Q Consensus 339 a~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l 372 (391)
+++|+||.+| +++.+ +++ +||++++|++.|
T Consensus 226 ~~gv~pV~~i--~~~~~--~~~~~~~~~~~l~~~~ 256 (256)
T cd00449 226 AAEVTPVTEI--DGRGI--GDGKPGPVTRKLRELL 256 (256)
T ss_pred cceEEEEEEE--CCeec--CCCCCCHHHHHHHHhC
Confidence 9999999999 46655 444 799999998764
No 26
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate. Based on the information available from the crystal structure, most members of this subgroup are likely to function as dimers. The enzyme from E.Coli, the structure of which is available, is a homodimer that is folded into a small and a larger domain. The coenzyme pyridoxal 5; -phosphate resides at the interface of the two domains that is linked by a flexible loop. Members of this subgroup are found in Eukaryotes and bacteria.
Probab=100.00 E-value=3.2e-49 Score=376.65 Aligned_cols=247 Identities=31% Similarity=0.454 Sum_probs=211.1
Q ss_pred CccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEE
Q 016343 103 SGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRP 182 (391)
Q Consensus 103 ~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp 182 (391)
|++|+||||+|||||+| +|+ +|++++|++||.+||++|+||.++.+.+.+.+.++++.+.. ...+||+
T Consensus 1 Drg~~~GdgvFEt~~~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~i~~~~~-------~~~~ir~ 68 (249)
T cd01559 1 DRGFAYGDGVFETMRAL---DGR--LFLLDAHLARLERSARRLGIPEPDLPRLRAALESLLAANDI-------DEGRIRL 68 (249)
T ss_pred CCcccccceeEEEEEEE---CCE--EccHHHHHHHHHHHHHhcCcCCCCHHHHHHHHHHHHHhCCC-------CceEEEE
Confidence 68999999999999998 566 67899999999999999999955899999999999998752 3568998
Q ss_pred EEEccCCcccccC--CCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCce
Q 016343 183 LLVGSGPILGLAP--APEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSD 260 (391)
Q Consensus 183 ~~~g~~~~lg~~p--~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd 260 (391)
++.......|+.+ ..++.++++..|.++ ....+++++.+.+ +.|..+..++++|+. ||+.+++++++|+++|+||
T Consensus 69 ~v~rg~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~gv~l~~~~-~~~~~~~~~~~~Kt~-ny~~~~~a~~~a~~~g~de 145 (249)
T cd01559 69 ILSRGPGGRGYAPSVCPGPALYVSVIPLPP-AWRQDGVRLITCP-VRLGEQPLLAGLKHL-NYLENVLAKREARDRGADE 145 (249)
T ss_pred EEecCCCCCCCCCCCCCCCEEEEEeccCCH-HHHhCCcEEEEcc-cccCCCCCCCCcchh-hhHHHHHHHHHHHhcCCCE
Confidence 7764333345543 345678888888654 1123567777664 677777789999995 9999999999999999999
Q ss_pred EEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcC
Q 016343 261 VLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAV 340 (391)
Q Consensus 261 ~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~ 340 (391)
+||+|. +|+|+|++++|||++++++|+||+++.++||||||+.++++++++|++|+|+.|+++||.+|||+|+|||++
T Consensus 146 ~l~l~~--~g~v~E~~~~Nif~~~~~~~~TP~~~~g~L~Gitr~~~l~~~~~~g~~v~e~~i~~~el~~ade~~~~ns~~ 223 (249)
T cd01559 146 ALFLDT--DGRVIEGTASNLFFVKDGELVTPSLDRGGLAGITRQRVIELAAAKGYAVDERPLRLEDLLAADEAFLTNSLL 223 (249)
T ss_pred EEEEcC--CCCEEEecceEEEEEECCEEECCCcccCccccHHHHHHHHHHHHcCceEEEEecCHHHHhhCCEEEEecCcc
Confidence 999997 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEeEEEEeCCeEEeeCCCchHHHHHHHHHH
Q 016343 341 VVAPVGSITYRGKRIEFKTGAQSVSRELYSTL 372 (391)
Q Consensus 341 ~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l 372 (391)
+|+||.+|+ +.. ..+||++++|++.|
T Consensus 224 gi~pV~~id--~~~----~~~~~~~~~l~~~~ 249 (249)
T cd01559 224 GVAPVTAID--DHD----GPPGPLTRALRELL 249 (249)
T ss_pred ceeEEEEEC--Ccc----cCccHHHHHHHHhC
Confidence 999999994 321 12699999998764
No 27
>PRK09266 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-48 Score=370.96 Aligned_cols=255 Identities=17% Similarity=0.182 Sum_probs=213.3
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~ 164 (391)
.|.||+++|..++. .+|+||||+||||+++ +|+ +|++++|++||.+||++|+++.++.+.+.+.+.++++
T Consensus 5 ~~~nG~~~~~~~a~-----~~~~~GdgvFETir~~---~g~--~~~l~~Hl~RL~~sa~~l~~~~~~~~~l~~~l~~~~~ 74 (266)
T PRK09266 5 IELNGRPATAEDLA-----ALALANYGHFTSMQVR---DGR--VRGLDLHLQRLRRASRELFGAALDDDRVRAQLRAALA 74 (266)
T ss_pred EEECCEECCHHHhh-----hHhhccceEEEEEEEE---CCE--EcCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHh
Confidence 69999999999876 4999999999999997 676 6779999999999999997766689999999999984
Q ss_pred HcCCCCCCCCCccEEEEEEEEccCCcccccC-CCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccCCh
Q 016343 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAP-APEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAISNY 243 (391)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p-~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY 243 (391)
.. ....|||+.+.+..+.+|..+ ...+++++++.|.+++.. +++++.+.+ +.|.. ..+|+. ||
T Consensus 75 ~~--------~~~~~ir~~v~r~~g~~~~~~~~~~~~~~i~~~~~~~~~~--~~v~l~~~~-~~r~~----~~~K~~-~~ 138 (266)
T PRK09266 75 AG--------PADASVRVTVFAPDFDFRNPLADVAPDVLVATSPPADGPA--GPLRLQSVP-YEREL----PHIKHV-GT 138 (266)
T ss_pred cC--------CCcEEEEEEEEecCcccCCCCCCCCceEEEEEecCCcCCC--CCeEEEEEE-ecccC----CCCCCC-Cc
Confidence 32 135799988764344455533 235677777777654432 466666553 45643 469997 77
Q ss_pred HHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeC
Q 016343 244 APVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIP 323 (391)
Q Consensus 244 ~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~ 323 (391)
..+++++++|+++|+||+|++|. +|+|+|++++|||++++++|+||+. ++|+||||+.|+++|+++|++|+|+.++
T Consensus 139 l~~vla~~~a~~~g~de~l~ln~--~g~v~E~~~sNlf~v~~~~l~TP~~--~~L~GItR~~ll~~~~~~g~~v~e~~i~ 214 (266)
T PRK09266 139 FGQLHLRRLAQRAGFDDALFVDP--DGRVSEGATWNLGFWDGGAVVWPQA--PALPGVTMALLQRGLERLGIPQRTRPVT 214 (266)
T ss_pred HHHHHHHHHHHHcCCCeEEEEcC--CCcEEEcCceEEEEEECCEEECCCC--CccchHHHHHHHHHHHHcCCeeEEEECC
Confidence 77888999999999999999997 7999999999999999999999984 7999999999999999999999999999
Q ss_pred HHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHh
Q 016343 324 VDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVG 374 (391)
Q Consensus 324 ~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~ 374 (391)
++||.+|||+|+|||+++|+||.+| ++..+ +++ +|++++|++.|.+
T Consensus 215 ~~eL~~adevfltnSl~gi~pV~~i--~~~~~--~~~-~~~~~~l~~~~~~ 260 (266)
T PRK09266 215 LADLGRFAGAFACNAWRGQRAVSAI--DDVAL--PDS-HALLELLRRAYEA 260 (266)
T ss_pred HHHHHHhhHhhhhcCccceEEEEEE--CCEEC--CCC-chHHHHHHHHHHh
Confidence 9999999999999999999999999 46654 543 7999999999954
No 28
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-IV, currently consists of proteins of about 270 to 415 amino-acid residues that share a few regions of sequence similarity. Surprisingly, the best conserved region does not include the lysine residue to which the pyridoxal-phosphate group is known to be attached, in ilvE, but is located some 40 residues at the C terminus side of the pyridoxal-phosphate-lysine. The D-amino acid transferases (D-AAT), which are among the members of this entry, are required by bacteria to catalyse the synthesis of D-glutamic acid and D-alanine, which are essential constituents of bacterial cell wall and are the building block for other D-amino acids. Despite the difference in the structure of the substrates, D-AATs and L-ATTs have strong similarity [, ]. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1EKV_A 2HGX_A 1EKP_A 1KTA_B 1KT8_B 2A1H_B 2HDK_A 2HGW_B 1EKF_B 2HG8_A ....
Probab=100.00 E-value=3.7e-39 Score=302.39 Aligned_cols=224 Identities=31% Similarity=0.427 Sum_probs=172.2
Q ss_pred eChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEee
Q 016343 129 FRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASP 207 (391)
Q Consensus 129 Fr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P 207 (391)
|++++|++||.+||+.+ ++.+ +.+.+.+.+.++++.+.. .+..|||+++.+++...+..++...........
T Consensus 1 f~l~~Hl~Rl~~S~~~l-~~~~~~~~~l~~~i~~~~~~~~~------~~~~~ir~~v~~g~~~~~~~~~~~~~~~~~~~~ 73 (231)
T PF01063_consen 1 FFLDEHLERLRRSARAL-IGLPFSREELREIIQELLEANPD------QGEGYIRITVTRGGGPLGGSPPENSAPPPFSIA 73 (231)
T ss_dssp ETHHHHHHHHHHHHHHT-TTHSSHHHHHHHHHHHHHHHTTS------SSSEEEEEEEEETSSSSSSSECSEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHH-ccCCcCHHHHHHHHHHHHHHcCC------CCCcEEEEEEEcCCCCcCccCcccccccccccc
Confidence 67999999999999999 4433 789999999999998761 245599998877666566655443322211111
Q ss_pred CCCcCCCcccEEEEeeccccccCCC-----CCCCcCccCChHHHHH-HHHHHHhCCCceEEEEeCCCCCeEEeecceeEE
Q 016343 208 VGNYFKGLAPLNLYVEDEFHRATPG-----GAGGVKAISNYAPVLK-AISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIF 281 (391)
Q Consensus 208 ~~~y~~G~~pv~l~v~~~~~R~~p~-----g~g~~K~~~nY~~~l~-a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif 281 (391)
.. +. .+..........++.+. .++.+|+. ||..+.+ +.++|+++|+||+|++|. +|+|+|++++|||
T Consensus 74 ~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Kt~-~~~~~~~~~~~~a~~~g~de~ll~d~--~G~v~E~~~sNif 146 (231)
T PF01063_consen 74 PP-RR---PPPPLVGSVGVRRASPPLPRPNPLPRHKTT-NRLANVLAALRAAREKGADEALLLDE--DGNVTEGSTSNIF 146 (231)
T ss_dssp TC-HH---HHEEEEEECSEECETTTSE-TTTSTTS-BS-HHHHHHHHHHHHHHHTTSSEEEEEET--TSBEEEESSSEEE
T ss_pred cc-cc---CCcceeeeeeEEeccccccccCCCCCeeEC-CcchhhHHHHHHHHhcCcchhheecC--CCCcCCCCCcccc
Confidence 11 11 11111111222222222 37899997 6555665 777777999999999998 7999999999999
Q ss_pred EEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCc
Q 016343 282 ILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGA 361 (391)
Q Consensus 282 ~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~ 361 (391)
++++++|+||+++.|||+||||+.++++++++|++|+|++++++||.+|||+|+|||+++|+||.+| +++.+ + .
T Consensus 147 ~~~~~~~~TP~~~~giL~Gitr~~ll~~~~~~g~~v~e~~i~~~~L~~ade~fl~ns~~gi~pV~~i--~~~~~--~--~ 220 (231)
T PF01063_consen 147 FVKDGTLYTPPLDSGILPGITRQLLLELAKELGIPVEERPITLDDLQQADEVFLTNSLRGIRPVKSI--DGRSF--G--P 220 (231)
T ss_dssp EEETTEEEEESGSSSSB--HHHHHHHHHHHHTTSEEEEE-BBHHHHHTHSEEEEEETTTEEEEEEEE--TTEES--T--T
T ss_pred cccCCEEEcCChhhhhccHHHHHHHHHHHHhCCCCcEEEEeCHHHhhhhhheEEecchhhEEEEEEE--CCEEC--C--C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 57765 4 7
Q ss_pred hHHHHHHHHHH
Q 016343 362 QSVSRELYSTL 372 (391)
Q Consensus 362 g~vt~~L~~~l 372 (391)
||++++|+++|
T Consensus 221 ~p~~~~L~~~~ 231 (231)
T PF01063_consen 221 GPITRRLQEAY 231 (231)
T ss_dssp HHHHHHHHHHH
T ss_pred CHHHHHHHHhC
Confidence 99999999986
No 29
>PRK07546 hypothetical protein; Provisional
Probab=100.00 E-value=2e-36 Score=281.74 Aligned_cols=205 Identities=17% Similarity=0.195 Sum_probs=167.0
Q ss_pred CeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccCC
Q 016343 110 QGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGP 189 (391)
Q Consensus 110 ~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~ 189 (391)
-++||||+++ ++|+ ++++++|++||.+||+.|++|.+ .+.+.+.+.++++.+. +..++|..+. .++
T Consensus 4 ~~lfETi~~~--~~G~--~~~l~~Hl~RL~~sa~~l~~~~~-~~~l~~~l~~~~~~~~--------~~~~vrl~~~-~~g 69 (209)
T PRK07546 4 FELIETLRWE--PGAG--FPRLDRHLARLERSARALGFPCD-PAAVRAKLAEAVAGAQ--------GPLRLRLTLA-RDG 69 (209)
T ss_pred ccEEEEEEEe--CCCC--cccHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHhhccC--------CCeEEEEEEc-CCC
Confidence 3799999985 2676 66789999999999999999975 6788888988887532 3567885543 221
Q ss_pred cccccCCCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCC
Q 016343 190 ILGLAPAPEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNK 269 (391)
Q Consensus 190 ~lg~~p~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~ 269 (391)
.+.+...|.++... ..++++.+.+ ..+..+..+..+|+. ||..+++++++|+++|+||+|++|. +
T Consensus 70 ----------~~~i~~~p~~~~~~-~~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~v~a~~~a~~~g~de~l~l~~--~ 134 (209)
T PRK07546 70 ----------RLTVETAPLPPLPP-DTVWRVAIAR-TRLDSADPLLRYKTT-RRAAYDAARAELPPAEADEVILLNE--R 134 (209)
T ss_pred ----------CEEEEEecCCCCCC-CCcEEEEEcC-cccCCCCcchhcccC-ChHHHHHHHHHHhhCCCCEEEEECC--C
Confidence 25566777654221 1234454443 344444456789996 9999999999999999999999997 7
Q ss_pred CeEEeecceeEEEEeCCEEE-ccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEE
Q 016343 270 KNLEEVSSCNIFILKGNIIS-TPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSI 348 (391)
Q Consensus 270 g~I~E~s~sNif~v~~~~l~-TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I 348 (391)
|+|+|++++||||+++++|+ ||+++.|+|+||||+.+++. .+|+|+.++++||.+|||+|+|||++||.||..|
T Consensus 135 G~v~E~s~~Ni~~~~~~~~~~TP~~~~g~L~Gi~R~~ll~~-----~~v~e~~i~~~~L~~adevfl~NSl~gv~pV~~~ 209 (209)
T PRK07546 135 GEVCEGTITNVFLDRGGGMLTTPPLSCGLLPGVLRAELLDA-----GRAREAVLTVDDLKSARAIWVGNSLRGLIRAELI 209 (209)
T ss_pred CcEEEcCceeEEEEECCEEEECCCCcCCCCccHHHHHHHhh-----CCeEEEEcCHHHHhhCCEEEEEccceeEEEEEEC
Confidence 99999999999999999999 99999999999999999985 6899999999999999999999999999999864
No 30
>PRK07101 hypothetical protein; Provisional
Probab=99.96 E-value=2.7e-28 Score=223.70 Aligned_cols=182 Identities=17% Similarity=0.224 Sum_probs=136.3
Q ss_pred eEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCC-C-CHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccC
Q 016343 111 GLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPS-P-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSG 188 (391)
Q Consensus 111 ~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~-~-~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~ 188 (391)
++||||+++ +|+ ++++++|++||.+||+.+++.. + +.+.+.+.+.++ . .+..|+|.+. +.+
T Consensus 4 ~l~ETir~~---~g~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~~~~~~~~~~----~-------~~~~r~rl~~-~~g 66 (187)
T PRK07101 4 PLFETIAIE---DGE--IQNLSYHQQRYERTLAEFYGKEAPFDLAEIIQPPTEL----Q-------EGLVRCRIDY-NAE 66 (187)
T ss_pred cceEEEeee---CCe--eccHHHHHHHHHHHHHHHcccCCcccHHHHhhchhhh----c-------CCCEEEEEEe-cCC
Confidence 699999996 676 6789999999999999998854 3 667777666543 1 2457888654 543
Q ss_pred CcccccCCCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCC
Q 016343 189 PILGLAPAPEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVN 268 (391)
Q Consensus 189 ~~lg~~p~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~ 268 (391)
.+ -+...|..+.. .+++++...++ ..-.+|+. |+. .+....|++.|+||+|++|
T Consensus 67 -~~----------~~~~~~~~~~~--~~~~~~~~~~~-------~~~~~Kt~-~r~--~~~~~~a~~~g~de~l~~~--- 120 (187)
T PRK07101 67 -IY----------QVQYFPYQRRP--IRSFQPVYCDD-------IDYSLKYT-DRS--ALNELFAQKGECDEIIIIK--- 120 (187)
T ss_pred -cE----------EEEEEcCCCCC--cCceEEEecCC-------cccccccC-CHH--HHHHHHHHhCCCCEEEEEc---
Confidence 12 22333432211 23444432221 12378997 442 2345556778999999997
Q ss_pred CCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCce
Q 016343 269 KKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVV 342 (391)
Q Consensus 269 ~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I 342 (391)
+|+|+|++++|||++++++|+||| .++|+||||+.+++. | +|+|+.|+++||.+|||+|+|||++|.
T Consensus 121 ~G~v~E~~~sNi~~~~~~~~~TP~--~~~L~Gi~R~~ll~~----~-~v~e~~i~~~~L~~ad~~~~~nsl~G~ 187 (187)
T PRK07101 121 NGLVTDTSIGNLAFFDGKQWFTPK--KPLLKGTQRARLLDE----G-KIKEKDITVEDLLQYEEIRLINAMNGF 187 (187)
T ss_pred CCEEEEccceEEEEEECCEEEcCC--CCCccHHHHHHHHcc----C-CEEEEecCHHHHhcCCEEEEEecccCC
Confidence 599999999999999999999999 489999999999984 6 899999999999999999999999873
No 31
>PF15507 DUF4649: Domain of unknown function (DUF4649)
Probab=70.16 E-value=7.5 Score=30.20 Aligned_cols=53 Identities=21% Similarity=0.196 Sum_probs=38.0
Q ss_pred EEEeeCHHhHhccc-eeEEE-cCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHH
Q 016343 318 EERAIPVDELLEAD-EVFCT-GTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYS 370 (391)
Q Consensus 318 ~Er~i~~~eL~~ad-Evf~t-gTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~ 370 (391)
.||.++.++..++. .--+| -|...-.||.++.++|+.+.+.+.-|.+...|.+
T Consensus 11 ~Er~~~fe~~~ef~~s~~~C~vtipD~~~V~svt~~G~~ldy~G~~GdLY~~L~k 65 (72)
T PF15507_consen 11 QERTQTFEDYNEFMRSQSGCIVTIPDYYPVTSVTYNGQDLDYQGTYGDLYFFLMK 65 (72)
T ss_pred eEEEEEeCCHHHHHHHhccCcccCCCceEEEEEEECCEEeccccchhHHHHHHHH
Confidence 57777777665542 22345 7888999999999999999775436777666654
No 32
>PF03698 UPF0180: Uncharacterised protein family (UPF0180); InterPro: IPR005370 The members of this family are small uncharacterised proteins.
Probab=35.30 E-value=1.1e+02 Score=24.35 Aligned_cols=66 Identities=18% Similarity=0.316 Sum_probs=45.8
Q ss_pred HHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC--chHHHHHHHHHH
Q 016343 305 SIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG--AQSVSRELYSTL 372 (391)
Q Consensus 305 silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~--~g~vt~~L~~~l 372 (391)
-|-+.+++.|++|..-. .-+++..+|.+.++|--..+.-+.....+.-.|. ..| +.++++.|.++|
T Consensus 12 ~v~~~L~~~GyeVv~l~-~~~~~~~~daiVvtG~~~n~mg~~d~~~~~pVIn-A~G~T~eEI~~~v~~rl 79 (80)
T PF03698_consen 12 NVKEALREKGYEVVDLE-NEQDLQNVDAIVVTGQDTNMMGIQDTSTKVPVIN-ASGLTAEEIVQEVEERL 79 (80)
T ss_pred HHHHHHHHCCCEEEecC-CccccCCcCEEEEECCCcccccccccccCceEEe-cCCCCHHHHHHHHHHhh
Confidence 35567888999887544 3345788999999998888877765544443332 233 788888888776
No 33
>PRK03094 hypothetical protein; Provisional
Probab=26.77 E-value=2.1e+02 Score=22.74 Aligned_cols=65 Identities=18% Similarity=0.296 Sum_probs=45.6
Q ss_pred HHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC--chHHHHHHHHHH
Q 016343 306 IIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG--AQSVSRELYSTL 372 (391)
Q Consensus 306 ilela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~--~g~vt~~L~~~l 372 (391)
|-+.+++.|++|+.=. +..++...|.+.+||--..++-+....++.-.|. ..| +.++++.|.+++
T Consensus 13 i~~~L~~~GYeVv~l~-~~~~~~~~Da~VitG~d~n~mgi~d~~t~~pVI~-A~G~TaeEI~~~ve~r~ 79 (80)
T PRK03094 13 VQQALKQKGYEVVQLR-SEQDAQGCDCCVVTGQDSNVMGIADTSTKGSVIT-ASGLTADEICQQVESRL 79 (80)
T ss_pred HHHHHHHCCCEEEecC-cccccCCcCEEEEeCCCcceecccccccCCcEEE-cCCCCHHHHHHHHHHhh
Confidence 5567888999886432 2234677899999999999988887654443342 234 688888887765
No 34
>cd05569 PTS_IIB_fructose PTS_IIB_fructose: subunit IIB of enzyme II (EII) of the fructose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII (also referred to as FruAB) is a fructose-specific permease made up of two proteins (FruA and FruB) each containing 3 domains. The FruA protein contains two tandem nonidentical IIB domains and a C-terminal IIC transmembrane domain. Both IIB domains of FruA are included in this alignment. The FruB protein (also referred to as diphosphoryl transfer protein) contains a IIA domain, a domain of unknown function, and an Hpr-like domain called FPr (fructose-inducible HPr). This familiy also includes the IIB domains of several fructose-like PTS permeases including the Frv permease encoded by the frvABXR operon, the Frw permease encoded by the frwACBD operon, the Frx permease encoded by the hrsA gene, and the Fry permease encoded by the fryABC (ypdDGH) operon. FruAB takes up exogenous fructose, releasing the 1-p
Probab=25.06 E-value=1.4e+02 Score=24.16 Aligned_cols=37 Identities=19% Similarity=0.428 Sum_probs=28.8
Q ss_pred HHHHHHHHHCCCcEE---------EEeeCHHhHhccceeEEEcCcC
Q 016343 304 KSIIEIASDCGFQVE---------ERAIPVDELLEADEVFCTGTAV 340 (391)
Q Consensus 304 ~silela~~~G~~V~---------Er~i~~~eL~~adEvf~tgTa~ 340 (391)
+.+-+.+++.|+++. +..++.+++.+||-+++++...
T Consensus 19 ~~L~~aa~~~g~~~~ve~~~~~g~~~~l~~~~i~~Ad~vi~~~~~~ 64 (96)
T cd05569 19 EALEKAAKKLGWEIKVETQGSLGIENELTAEDIAEADAVILAADVP 64 (96)
T ss_pred HHHHHHHHHCCCeEEEEEecCcCccCcCCHHHHhhCCEEEEecCCC
Confidence 444457888999877 5567779999999999988864
No 35
>TIGR00829 FRU PTS system, fructose-specific, IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Fru family is a large and complex family which includes several sequenced fructose and mannitol-specific permeases as well as several PTS components of unknown specificities. The fructose components of this family phosphorylate fructose on the 1-position. The Fru family PTS systems typically have 3 domains, IIA, IIB and IIC, which may be found as 1 or more proteins. The fructose and mannitol transporters form separate phylogenetic clusters in this family. This family is specific for the IIB domain of the fructose PTS transporters.
Probab=24.92 E-value=1.1e+02 Score=24.22 Aligned_cols=33 Identities=21% Similarity=0.404 Sum_probs=26.8
Q ss_pred HHHHHCCCcEE---------EEeeCHHhHhccceeEEEcCcC
Q 016343 308 EIASDCGFQVE---------ERAIPVDELLEADEVFCTGTAV 340 (391)
Q Consensus 308 ela~~~G~~V~---------Er~i~~~eL~~adEvf~tgTa~ 340 (391)
+.|++.|+.+. +..++.+++..||-+++.+...
T Consensus 22 ~aA~~~G~~i~VE~qg~~g~~~~lt~~~i~~Ad~viia~d~~ 63 (85)
T TIGR00829 22 KAAKKRGWEVKVETQGSVGAQNALTAEDIAAADGVILAADRE 63 (85)
T ss_pred HHHHHCCCeEEEEecCCcCccCCCCHHHHHhCCEEEEeccCC
Confidence 45778898776 5568889999999999988763
No 36
>KOG3442 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.90 E-value=1.7e+02 Score=25.21 Aligned_cols=40 Identities=18% Similarity=0.336 Sum_probs=33.3
Q ss_pred HHHHHHHcCCCCC-CHHHHHHHHHHHHHHcCCCCCCCCCccEEEE
Q 016343 138 LQTGAERMCMPSP-SIDQFIDAVKQTALANKRWVPPPGKGSLYIR 181 (391)
Q Consensus 138 L~~Sa~~l~ip~~-~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIR 181 (391)
|+.++..|++..+ +.+++.+--..|.+.|.. ..+|++||.
T Consensus 58 lqEa~qILnV~~~ln~eei~k~yehLFevNdk----skGGSFYLQ 98 (132)
T KOG3442|consen 58 LQEAQQILNVKEPLNREEIEKRYEHLFEVNDK----SKGGSFYLQ 98 (132)
T ss_pred HHHHhhHhCCCCCCCHHHHHHHHHHHHhccCc----ccCcceeeh
Confidence 5778889999866 899999999999999874 246799996
No 37
>PRK10474 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=21.60 E-value=1.4e+02 Score=23.77 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=29.1
Q ss_pred HHHHHHHHHCCCcEE---------EEeeCHHhHhccceeEEEcCcC
Q 016343 304 KSIIEIASDCGFQVE---------ERAIPVDELLEADEVFCTGTAV 340 (391)
Q Consensus 304 ~silela~~~G~~V~---------Er~i~~~eL~~adEvf~tgTa~ 340 (391)
+.+-+.|++.|+.+. +..++.+++..||-+++.+...
T Consensus 4 eaL~~aA~~~G~~i~VEtqg~~g~~~~lt~~~i~~Ad~VIia~d~~ 49 (88)
T PRK10474 4 EALESAAKAKGWEVKVETQGSIGLENELTAEDVASADMVILTKDIG 49 (88)
T ss_pred HHHHHHHHHCCCeEEEEecCCcCcCCCCCHHHHHhCCEEEEEecCC
Confidence 345567888998776 4458889999999999998763
No 38
>PF13051 DUF3912: Protein of unknown function (DUF3912)
Probab=20.98 E-value=87 Score=23.28 Aligned_cols=39 Identities=15% Similarity=0.184 Sum_probs=31.1
Q ss_pred cceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCC
Q 016343 276 SSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCG 314 (391)
Q Consensus 276 s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G 314 (391)
.-++++++.+++.+--.+.+-+|-||--...-++|++.|
T Consensus 30 ~~~~f~ivi~~q~i~velkdivlvgvdvgqfh~wceqng 68 (68)
T PF13051_consen 30 LESHFAIVIGEQSIDVELKDIVLVGVDVGQFHEWCEQNG 68 (68)
T ss_pred cCCcEEEEECCeEEEEEeeeEEEEEecHHHHHHHHhhCC
Confidence 346788888888888888888899998888877776654
No 39
>PF09778 Guanylate_cyc_2: Guanylylate cyclase; InterPro: IPR018616 Members of this family of proteins catalyse the conversion of guanosine triphosphate (GTP) to 3',5'-cyclic guanosine monophosphate (cGMP) and pyrophosphate.
Probab=20.86 E-value=1e+02 Score=28.96 Aligned_cols=28 Identities=25% Similarity=0.561 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHCCCcEEEEeeCHHhHhc
Q 016343 302 TRKSIIEIASDCGFQVEERAIPVDELLE 329 (391)
Q Consensus 302 TR~silela~~~G~~V~Er~i~~~eL~~ 329 (391)
--+.+.+.|++.|+.|++|.++++||.+
T Consensus 91 RV~~lF~~A~~~gi~V~~rsvs~~ei~~ 118 (212)
T PF09778_consen 91 RVNRLFQKAKAAGINVEKRSVSIQEIIE 118 (212)
T ss_pred HHHHHHHHHHHcCCceEEeeccHHHHHH
Confidence 3456677899999999999999999976
No 40
>COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB [Function unknown]
Probab=20.85 E-value=69 Score=26.06 Aligned_cols=32 Identities=31% Similarity=0.456 Sum_probs=27.4
Q ss_pred ccHHHHHHHHHHHHCCCcEEEEeeCHHhHhcc
Q 016343 299 AGITRKSIIEIASDCGFQVEERAIPVDELLEA 330 (391)
Q Consensus 299 ~GITR~silela~~~G~~V~Er~i~~~eL~~a 330 (391)
.|=.-+.|++.|++.|++++|.+.-++-|.+-
T Consensus 30 ~G~iAe~II~~Ake~~Vpi~edp~Lv~~L~~l 61 (92)
T COG2257 30 KGEIAEKIIEKAKEHGVPIQEDPLLVELLLKL 61 (92)
T ss_pred chHHHHHHHHHHHHcCCCcccCHHHHHHHHhc
Confidence 46678899999999999999999888877654
Done!