Query 016343
Match_columns 391
No_of_seqs 280 out of 1904
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 11:59:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016343.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016343hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dth_A Branched-chain amino ac 100.0 3.6E-89 1.2E-93 683.7 35.3 343 49-391 16-372 (372)
2 3dtg_A Branched-chain amino ac 100.0 8.5E-89 2.9E-93 682.7 35.6 329 63-391 30-372 (372)
3 3uzo_A Branched-chain-amino-ac 100.0 4.3E-85 1.5E-89 652.2 34.6 336 53-390 16-358 (358)
4 4dqn_A Putative branched-chain 100.0 8.6E-83 3E-87 633.1 38.8 332 59-391 7-344 (345)
5 2coi_A Branched chain aminotra 100.0 8.6E-82 2.9E-86 634.3 39.4 333 56-391 37-386 (386)
6 2a1h_A Branched chain aminotra 100.0 7E-79 2.4E-83 609.7 40.4 330 57-390 18-365 (365)
7 3u0g_A Putative branched-chain 100.0 6.2E-67 2.1E-71 516.2 32.8 295 81-390 26-328 (328)
8 1iye_A Branched-chain amino ac 100.0 3.9E-63 1.3E-67 485.0 34.4 292 85-391 9-308 (309)
9 2eiy_A ILVE, branched-chain am 100.0 6.6E-63 2.2E-67 483.3 34.5 291 85-391 8-306 (308)
10 3daa_A D-amino acid aminotrans 100.0 4.9E-57 1.7E-61 436.0 32.2 267 85-375 3-275 (277)
11 1i2k_A 4-amino-4-deoxychorisma 100.0 2.6E-55 8.8E-60 421.7 31.6 261 85-373 2-266 (269)
12 3lul_A 4-amino-4-deoxychorisma 100.0 2.7E-54 9.3E-59 415.7 32.1 259 85-376 6-267 (272)
13 2xpf_A 4-amino-4-deoxychorisma 100.0 2E-54 6.9E-59 420.6 30.7 261 85-374 24-288 (292)
14 3csw_A BCAT, putative branched 100.0 8.2E-54 2.8E-58 415.0 25.0 273 74-388 9-284 (285)
15 3sno_A Hypothetical aminotrans 100.0 1.4E-53 4.8E-58 418.7 26.1 267 85-374 17-312 (315)
16 2zgi_A Putative 4-amino-4-deox 100.0 3.5E-47 1.2E-51 360.9 20.7 226 85-348 2-228 (246)
17 3qqm_A MLR3007 protein; struct 100.0 2.6E-42 8.7E-47 322.8 24.0 207 107-347 13-220 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 6.3E-39 2.2E-43 293.6 19.3 189 107-342 2-194 (194)
19 2kyr_A Fructose-like phosphotr 20.8 1E+02 0.0036 24.7 4.2 45 295-339 16-70 (111)
No 1
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=3.6e-89 Score=683.72 Aligned_cols=343 Identities=39% Similarity=0.736 Sum_probs=324.2
Q ss_pred CCCCCCCCccCCCCCCCCCcccccCCceEEEEeecc-eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEe
Q 016343 49 PSAYSDDESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLV 127 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~ 127 (391)
+.+....+...++||++||||++|||||++++|+++ +|.||+|+|++++.|+|.|++||||||||||||+|+++||+++
T Consensus 16 ~~~~~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~ 95 (372)
T 3dth_A 16 ANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIV 95 (372)
T ss_dssp CCSSCCCHHHHHHHHHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEE
T ss_pred ecCCCCCchhcccchhccCCCCccCCceEEEEEcCCCeEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEe
Confidence 333444445556899999999999999999999995 8999999999999999999999999999999999999999999
Q ss_pred eeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCC-CCccEEEEEEEEccCCcccccCCCCcEEEEEEe
Q 016343 128 LFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPP-GKGSLYIRPLLVGSGPILGLAPAPEYTFLVFAS 206 (391)
Q Consensus 128 lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~-~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~ 206 (391)
+|||++|++||++||++|+||.++.+.|.++|+++++.|..|||+. .++++||||+++++++.+|+.|+.+++++|+++
T Consensus 96 lFrl~~H~~RL~~Sa~~L~mp~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~~~~~~i~~~ 175 (372)
T 3dth_A 96 SFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIAS 175 (372)
T ss_dssp EESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCSEEEEEEEEE
T ss_pred ecCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCCCeEEEEEEe
Confidence 9999999999999999999997799999999999999999999986 456899999999988889999988999999999
Q ss_pred eCCCcCC-CcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeC
Q 016343 207 PVGNYFK-GLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKG 285 (391)
Q Consensus 207 P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~ 285 (391)
|+++|++ |.+|+++.++++|.|++|++++.+|+++||+++++++++|+++||||+||||..++|+|+|+++||||++++
T Consensus 176 p~~~y~~~g~~~v~l~v~~~~~R~~p~g~~~~K~~gNY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~ 255 (372)
T 3dth_A 176 PAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFG 255 (372)
T ss_dssp EESCSSSCSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEES
T ss_pred eCchhhccCCccEEEEEccceeccCCCcccchhhHhhhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEEEC
Confidence 9999998 889999999888999999999999998899999999999999999999999986689999999999999999
Q ss_pred C----EEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhcc------ceeEEEcCcCceEEeEEEEeCCeEE
Q 016343 286 N----IISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRI 355 (391)
Q Consensus 286 ~----~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I~~~g~~~ 355 (391)
+ +|+||+++++|||||||++||++|+++|++|+||+|+++||.+| +|+|+|||+++|+||.+|+++++.+
T Consensus 256 ~~~g~~l~TP~l~~~iL~GITR~~vl~la~~~G~~v~Er~i~~~eL~~a~~~g~~dEvf~tgTa~~i~PV~~Id~~~~~~ 335 (372)
T 3dth_A 256 SGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEF 335 (372)
T ss_dssp CGGGCEEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEE
T ss_pred CCCceEEEECCCCCCcCHHHHHHHHHHHHHHCCCeEEEEECCHHHHHhhhhcCCccEEEEecccceEEEEEEEccCCceE
Confidence 8 99999999999999999999999999999999999999999998 9999999999999999999888888
Q ss_pred eeCCC-chHHHHHHHHHHHhhhccCCCCCCCCeEECC
Q 016343 356 EFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 356 ~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
.++++ +||+|++|+++|.+||+|++||++||+++||
T Consensus 336 ~i~~g~~Gpvt~~L~~~l~~iq~g~~~d~~~W~~~v~ 372 (372)
T 3dth_A 336 TIADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN 372 (372)
T ss_dssp ECTTSSCCHHHHHHHHHHHHHHHTSSCCTTCCEEECC
T ss_pred ECCCCCcCHHHHHHHHHHHHHHcCCCCCCCCCeEECC
Confidence 88877 8999999999999999999999999999996
No 2
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=8.5e-89 Score=682.71 Aligned_cols=329 Identities=40% Similarity=0.760 Sum_probs=316.3
Q ss_pred CCCCCcccccCCceEEEEeecc-eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHH
Q 016343 63 WDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTG 141 (391)
Q Consensus 63 ~~~l~fg~~~td~m~~~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~S 141 (391)
++|+|||++|||||++++|+.+ +|.||+|+|+++++|||.+++||||||||||||+|+++||++++|||++|++||++|
T Consensus 30 ~~~~~fg~~~tdhm~~~~~~~~~gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~S 109 (372)
T 3dtg_A 30 LANPGFGKYYTDHMVSIDYTVDEGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSS 109 (372)
T ss_dssp HHSCCSSSCCCSEEEEEEEETTTEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHH
T ss_pred hhccCCCCCccceeEEEEECCCCcEeCCEEEEchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhc
Confidence 6899999999999999999854 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCC-ccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-CcccEE
Q 016343 142 AERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-GLAPLN 219 (391)
Q Consensus 142 a~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~-~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~-G~~pv~ 219 (391)
|++|+||.++.+.+.+++.++++.+.+|||+... .++||||+++++++.+|+.|+.++.++++++|+++|+. |.+++.
T Consensus 110 a~~l~iP~~~~e~~~~~~~~l~~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~~~~~~ii~~p~~~~~~~~~~~~~ 189 (372)
T 3dtg_A 110 ARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVS 189 (372)
T ss_dssp HHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCSEEEEEEEEEEESCSSTTSSSCEE
T ss_pred ccccCCCCCCHHHHHHHHHHHHHHhhhhccccCCCCceEEEEEEEeecCccCcCCCCCceeeeEecccccccccCcccce
Confidence 9999999999999999999999999999998755 58999999999999999999999999999999999988 888998
Q ss_pred EEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEE----eCCEEEccCCCC
Q 016343 220 LYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFIL----KGNIISTPATSG 295 (391)
Q Consensus 220 l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v----~~~~l~TP~l~~ 295 (391)
+.+...+.|++|++++.+|.++||+++++++.+|+++||||+||||..++|+|+|++++|||+| +|++++|||+++
T Consensus 190 ~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~G~deal~Ld~~~~g~V~E~~~sNiF~V~~~~kdg~liTPpl~~ 269 (372)
T 3dtg_A 190 VWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSG 269 (372)
T ss_dssp EEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEEESCGGGCEEEECCCCS
T ss_pred eecccceeecCcCCcchHHhcCCcchhhhHHHHHHhcCcchhhhhccccccceeecCceEEEEEEecCCCceEEeCCccc
Confidence 9888899999999999999999999999999999999999999999877899999999999999 677999999999
Q ss_pred CccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhcc------ceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHH
Q 016343 296 TILAGITRKSIIEIASDCGFQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSREL 368 (391)
Q Consensus 296 ~iL~GITR~silela~~~G~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L 368 (391)
+||+||||++||++|+++|++|+||+|+++||.+| ||||+|||+++|+||.+|++++..+.+++| +||+|++|
T Consensus 270 ~iL~GITR~sVi~LA~~~Gi~V~Er~it~~El~~A~~~~~~dEvF~tGTaa~I~PV~~Id~~~~~~~ig~G~~Gpvt~~L 349 (372)
T 3dtg_A 270 SLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMAL 349 (372)
T ss_dssp SSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEETTTEEEEEEEEEETTEEEECTTSSCCHHHHHH
T ss_pred cccccHHHHHHHHHHHHCCceEEEEeCCHHHHHHHhhcCCCcEEEECCCcceEEEEEEEecCCceEEcCCCCcCHHHHHH
Confidence 99999999999999999999999999999999988 999999999999999999999988888888 89999999
Q ss_pred HHHHHhhhccCCCCCCCCeEECC
Q 016343 369 YSTLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 369 ~~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
+++|.+||+|++||++||+++||
T Consensus 350 ~~~~~~iq~G~~~d~~~W~~~v~ 372 (372)
T 3dtg_A 350 RDTLTGIQRGTFADTHGWMARLN 372 (372)
T ss_dssp HHHHHHHHTTSSCCTTCCEEECC
T ss_pred HHHHHHHHCCCCCCCCCCcEeCC
Confidence 99999999999999999999997
No 3
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=4.3e-85 Score=652.18 Aligned_cols=336 Identities=41% Similarity=0.700 Sum_probs=311.3
Q ss_pred CCCCccCCCCCCCCCcccccCCceEEEEeecceEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChH
Q 016343 53 SDDESADHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPD 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~ 132 (391)
..+++.+++||++|+||++|||||++++|++|.|.||+|+|++++.|+|.|++||||||||||||+|+++||++++|||+
T Consensus 16 ~~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~ 95 (358)
T 3uzo_A 16 EQAKKLADIDWSTLGFSYIRTDLRYLAHWKDGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPD 95 (358)
T ss_dssp --------CCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHH
T ss_pred cccccccCCCcccCCCCCcccCeeEEEEEeCCcEECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHH
Confidence 34556678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCC-ccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCc
Q 016343 133 QNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNY 211 (391)
Q Consensus 133 ~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~-~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y 211 (391)
+|++||++||++|+||.++.++|.++|+++++.|..|||+.+. +++||||+++++++.+|+.|+.++.++|+++|+++|
T Consensus 96 ~Hl~RL~~Sa~~L~ip~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~ 175 (358)
T 3uzo_A 96 QNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPY 175 (358)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCCceEEEEEEEEecCCccccCCCCCeEEEEEEecChhh
Confidence 9999999999999999779999999999999999999998644 589999999998888999998889999999999999
Q ss_pred CC-CcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEe-CCE-E
Q 016343 212 FK-GLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK-GNI-I 288 (391)
Q Consensus 212 ~~-G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~-~~~-l 288 (391)
++ |.+|+++.+++ +.|++|++++++|+++||+++++++++|+++||||+||||.+++|+|+|++++|||+++ ||+ |
T Consensus 176 ~~~g~~~v~l~~~~-~~R~~p~~~~~~K~~~NYl~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v~~dg~~l 254 (358)
T 3uzo_A 176 FKGGLTPTNFITSD-YDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAITQDGQKF 254 (358)
T ss_dssp SCSSSCCEEEECCS-CCSSCTTSSTTSCBHHHHHHHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEEETTSCEE
T ss_pred hhcCCccEEEEEEe-eeccCCCccccccchhhhHHHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEEECCCeEE
Confidence 88 88999998875 89999999999998779999999999999999999999998556999999999999995 788 9
Q ss_pred EccCCCCCccccHHHHHHHHHHHH-CCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCC-C-chHHH
Q 016343 289 STPATSGTILAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKT-G-AQSVS 365 (391)
Q Consensus 289 ~TP~l~~~iL~GITR~silela~~-~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~-~-~g~vt 365 (391)
+||+ +++||+||||++||++|++ +|++|+||+|+++||.+|||+|+|||+++|+||.+|++.++.+.+++ + +||++
T Consensus 255 ~TP~-~~~iL~GItR~~vl~la~~~~g~~v~e~~i~~~eL~~adEvf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt 333 (358)
T 3uzo_A 255 VTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFYSESEPGPVT 333 (358)
T ss_dssp EEEC-CTTSCCCHHHHHHHHHHHHTTCCEEEEECCBTTCGGGEEEEEEECTTTSSEEEEEEEETTEEEESSCSSSCCHHH
T ss_pred EECC-cCCcccCHHHHHHHHHHHhhcCCeEEEEECCHHHHHhhcceeEEcCcceEEEEEEECcccceeEeCCCCCcCHHH
Confidence 9999 8999999999999999999 99999999999999999999999999999999999998887777754 3 89999
Q ss_pred HHHHHHHHhhhccCCCCCCCCeEEC
Q 016343 366 RELYSTLVGIQTGLIKDNKGWTVEI 390 (391)
Q Consensus 366 ~~L~~~l~~iq~g~~~d~~~W~~~v 390 (391)
++|++.|.+||+|+.+|++||+++|
T Consensus 334 ~~L~~~~~~iq~g~~~~~~~W~~~v 358 (358)
T 3uzo_A 334 RRLYDELVGIQYGDKEAPEGWIVKV 358 (358)
T ss_dssp HHHHHHHHHHHTTSSCCCTTCCEEC
T ss_pred HHHHHHHHHHHcCCCCCCCCCceEC
Confidence 9999999999999999999999986
No 4
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=8.6e-83 Score=633.14 Aligned_cols=332 Identities=42% Similarity=0.724 Sum_probs=314.5
Q ss_pred CCCCCCCCCcccccCCceEEEEeecceEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHH
Q 016343 59 DHMDWDNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRL 138 (391)
Q Consensus 59 ~~~~~~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL 138 (391)
+++||++|+||++|||||++++|++|.|.||+|+|++++.|++.|++||||||||||||+|+++||++++|+|++|++||
T Consensus 7 ~~~~~~~l~fg~~~td~m~~~~~~~~~w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL 86 (345)
T 4dqn_A 7 VDLDWKNLGFEYHKLPFRYISYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERL 86 (345)
T ss_dssp CCCCGGGCCSCCCCCSCEEEEEEETTEECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHH
T ss_pred CCCCchhcCCCCcccCceEEEEecCCcEECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCC-ccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-Ccc
Q 016343 139 QTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGK-GSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-GLA 216 (391)
Q Consensus 139 ~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~-~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~-G~~ 216 (391)
++||++|+||.++.++|.++|.++++.|..|||+.+. +++||||+++++++.+|+.|+.+++++|+++|+++|++ +.+
T Consensus 87 ~~Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~~~ 166 (345)
T 4dqn_A 87 QRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLA 166 (345)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTSCC
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccCCC
Confidence 9999999999779999999999999999999998643 58999999998888889998888999999999999887 778
Q ss_pred cEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEE-eCCEEEccCCCC
Q 016343 217 PLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFIL-KGNIISTPATSG 295 (391)
Q Consensus 217 pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v-~~~~l~TP~l~~ 295 (391)
++++.+++++.|++|++++++|+++||+++++++++|+++||||+||+|.+++|+|+|++++|||++ +|++|+||+ ++
T Consensus 167 gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g~l~TP~-~~ 245 (345)
T 4dqn_A 167 PTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPL-SP 245 (345)
T ss_dssp CEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTCEEEECC-CT
T ss_pred CEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCCEEEeCC-CC
Confidence 9999998778999999999999977999999999999999999999999754699999999999998 899999999 89
Q ss_pred CccccHHHHHHHHHHHH-CCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC--chHHHHHHHHHH
Q 016343 296 TILAGITRKSIIEIASD-CGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG--AQSVSRELYSTL 372 (391)
Q Consensus 296 ~iL~GITR~silela~~-~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~--~g~vt~~L~~~l 372 (391)
+||+||||++||++|++ +|++|+|++|+++||.+|||+|+|||+++|+||.+|+..++.+.++++ +||++++|++.|
T Consensus 246 ~iL~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf~t~t~~~i~PV~~Id~~~~~~~i~~~~~~Gpvt~~L~~~~ 325 (345)
T 4dqn_A 246 SILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDFHVFYSETEVGPVTHKLYDEL 325 (345)
T ss_dssp TSCCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEEEEETTTEEEEEEEEEETTEEEESSCSSSCCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHhhhcchhHEEEEEEECcccceeeeCCCCCcCHHHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999999988887777653 799999999999
Q ss_pred HhhhccCCCCCCCCeEECC
Q 016343 373 VGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 373 ~~iq~g~~~d~~~W~~~v~ 391 (391)
.+||+|+.+|++||+++|+
T Consensus 326 ~~i~~g~~~~~~~W~~~v~ 344 (345)
T 4dqn_A 326 TGIQFGDVKAPEGWIYKVD 344 (345)
T ss_dssp HHHHTTSSCCCTTCEEETT
T ss_pred HHHHcCCCCCCCCCceECC
Confidence 9999999999999999986
No 5
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=8.6e-82 Score=634.32 Aligned_cols=333 Identities=34% Similarity=0.600 Sum_probs=308.9
Q ss_pred CccCCCCCCCCCcccccCCceEEEEeecc-eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHH
Q 016343 56 ESADHMDWDNLGFGLTPADYMYTMKCSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQN 134 (391)
Q Consensus 56 ~~~~~~~~~~l~fg~~~td~m~~~~~~~~-~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H 134 (391)
.++.++||++|+||++|||||+.++|+++ +|.||+|+|++++.|+|.|++|||||+||||||+|+++||++++|||++|
T Consensus 37 ~~~~~~~~~~~~fg~~~td~m~~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H 116 (386)
T 2coi_A 37 ILKEKPDPNNLVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLN 116 (386)
T ss_dssp SCCCCCCCC-CCTTCCCCSEEEEEEEETTTEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHH
T ss_pred CcccCCCccccCCccccccceEEEEeCCCcEEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHH
Confidence 34567899999999999999999999987 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-
Q 016343 135 AIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK- 213 (391)
Q Consensus 135 ~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~- 213 (391)
++||++||++|+||.++.++|.++|.++++.|..|+|+..++++||||+++|+++.+|+.|+.+++++|+++|+++|+.
T Consensus 117 ~~RL~~Sa~~l~~p~~~~e~~~~~i~~lv~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~y~~~ 196 (386)
T 2coi_A 117 MDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSS 196 (386)
T ss_dssp HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCCSEEEEEEEEEEECCCC--
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCccccCCCCCcEEEEEEEECcccccc
Confidence 9999999999999977999999999999999999999755568999999998888899999889999999999999987
Q ss_pred C-cccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEe---CC--E
Q 016343 214 G-LAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILK---GN--I 287 (391)
Q Consensus 214 G-~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~---~~--~ 287 (391)
| .+++++.+++.+.|++|++++.+|+++||+++++++++|+++||||+||||.. +|+|+|++++|||+++ || +
T Consensus 197 ~~~~~v~l~~~~~~~r~~p~~~g~~K~~~Ny~~~~la~~eA~~~G~de~L~ld~~-~g~V~E~~~sNiF~v~~~~~g~~~ 275 (386)
T 2coi_A 197 GTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGE-DHQITEVGTMNLFLYWINEDGEEE 275 (386)
T ss_dssp ---CCEEEEECTTCCSCCTTSSTTSCCTHHHHTTHHHHHHHHTTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEE
T ss_pred cccccEEEEEcccccccCCCcccccccccChHHHHHHHHHHHHcCCCEEEEEECC-CCEEEEeCCceEEEEEEcCCCCEE
Confidence 6 78999999988899999999999997799999999999999999999999942 7999999999999996 88 9
Q ss_pred EEccCCCCCccccHHHHHHHHHHHH-CCCcEEEEeeCHHhHhcc------ceeEEEcCcCceEEeEEEEeCCeEEeeC-C
Q 016343 288 ISTPATSGTILAGITRKSIIEIASD-CGFQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRIEFK-T 359 (391)
Q Consensus 288 l~TP~l~~~iL~GITR~silela~~-~G~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I~~~g~~~~~~-~ 359 (391)
|+||+++++||+||||++||++|++ +|++|+||+|+++||.+| +|+|+|||+++|+||.+|+|+|+.+.++ +
T Consensus 276 l~TP~l~~~iL~GITR~~vl~la~~~~G~~V~Er~i~~~eL~~A~~~g~~dEvF~tgTa~~i~PV~~I~~~~~~~~~~~~ 355 (386)
T 2coi_A 276 LATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTM 355 (386)
T ss_dssp EEECCCSSSSCCCHHHHHHHHHHHHHCSSEEEECCCBHHHHHHHHTTTCEEEEEEEETTTEEEEEEEEEESSSEEECGGG
T ss_pred EEECCCCCCccHHHHHHHHHHHHHhccCCcEEEEECCHHHHHHHHhcCCccEEEEecceeEEEEEEEEeeCCeEEecCCC
Confidence 9999999999999999999999999 799999999999999999 9999999999999999999889888664 3
Q ss_pred C-chHHHHHHHHHHHhhhccCCCCCCCCeEECC
Q 016343 360 G-AQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 360 ~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
+ +||++++|+++|.+||+|+++ +||+++|+
T Consensus 356 g~~g~vt~~L~~~l~~iq~g~~~--~~W~~~v~ 386 (386)
T 2coi_A 356 ENGPKLASRILSKLTDIQYGREE--RDWTIVLS 386 (386)
T ss_dssp GGTTHHHHHHHHHHHHHHTTSSC--CTTEEEC-
T ss_pred CCcCHHHHHHHHHHHHHhCCCCC--CCCeEeCC
Confidence 4 799999999999999999998 69999985
No 6
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=7e-79 Score=609.69 Aligned_cols=330 Identities=33% Similarity=0.597 Sum_probs=308.1
Q ss_pred ccCCCCC-CCCCcccccCCceEEEEeecceEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHH
Q 016343 57 SADHMDW-DNLGFGLTPADYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNA 135 (391)
Q Consensus 57 ~~~~~~~-~~l~fg~~~td~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~ 135 (391)
++.+++| ++|+||++|||||+.++|++.+|.||+++|++++.|+|.|++||||||||||||+|+++||++++|||++|+
T Consensus 18 ~~~~~~~~~~l~fg~~~~d~m~~~~~~~~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl 97 (365)
T 2a1h_A 18 PHKKPGPGEPLVFGKTFTDHMLMVEWNDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNM 97 (365)
T ss_dssp CCCCCCTTSCCCTTCSCCSEEEEEEEETTEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHH
T ss_pred ccCCCccccccCcCCccccceeeeecccCeEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHH
Confidence 3446778 999999999999999999887799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC-C
Q 016343 136 IRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK-G 214 (391)
Q Consensus 136 ~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~-G 214 (391)
+||++||++|+||.++.++|.++|.++++.|..|+|...+.++||||+++++++.+|+.|+.+++++|+++|+++|+. |
T Consensus 98 ~RL~~Sa~~l~~~~~~~~~l~~~i~~lv~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~g 177 (365)
T 2a1h_A 98 DRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGG 177 (365)
T ss_dssp HHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSS
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCCCCcEEEEEEEECccccccc
Confidence 999999999999977999999999999999999998754458999999998887899998888999999999999887 7
Q ss_pred -cccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEE-eCCCCCeEEeecceeEEEEe---CCE--
Q 016343 215 -LAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYL-DSVNKKNLEEVSSCNIFILK---GNI-- 287 (391)
Q Consensus 215 -~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~l-d~~~~g~I~E~s~sNif~v~---~~~-- 287 (391)
.+++++.+++.+.|++|++++++|+++||+.+++++++|+++||||+||| |. +|+|+|++++|||+++ ||+
T Consensus 178 ~~~~v~l~~~~~~~R~~~~~~~~~Kt~~ny~~~~la~~eA~~~G~de~L~l~d~--~G~V~E~~~sNif~v~~~~dg~~~ 255 (365)
T 2a1h_A 178 SVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP--DHQLTEVGTMNIFVYWTHEDGVLE 255 (365)
T ss_dssp SCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT--TTEEEEETTEEEEEEEECTTSCEE
T ss_pred cccceEEEEccccccCCCCccchhchhhccHHHHHHHHHHHHcCCCeEEEEECC--CCeEEEcCceEEEEEEecCCCcEE
Confidence 78999999887899999999999997799999999999999999999999 54 7999999999999996 675
Q ss_pred EEccCCCCCccccHHHHHHHHHHHHC-CCcEEEEeeCHHhHhcc------ceeEEEcCcCceEEeEEEEeCCeEEeeC-C
Q 016343 288 ISTPATSGTILAGITRKSIIEIASDC-GFQVEERAIPVDELLEA------DEVFCTGTAVVVAPVGSITYRGKRIEFK-T 359 (391)
Q Consensus 288 l~TP~l~~~iL~GITR~silela~~~-G~~V~Er~i~~~eL~~a------dEvf~tgTa~~I~PV~~I~~~g~~~~~~-~ 359 (391)
|+|||++++||+||||++||++|+++ |++|+||+|+++||.+| ||+|+|||+++|+||.+|+++|+.+.++ +
T Consensus 256 l~TP~l~~~iL~GITR~~vl~la~~~~G~~v~Er~i~~~eL~~A~~~g~~dEvf~tnt~~~i~PV~~i~~~~~~~~~~~~ 335 (365)
T 2a1h_A 256 LVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTM 335 (365)
T ss_dssp EEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTG
T ss_pred EEeCCCCCCccccHHHHHHHHHHHhcCCCceEEEeCCHHHHHHHHhcCCccEEEEcCCeeEEEEEEEEEeCCeEEeeCCC
Confidence 99999999999999999999999995 99999999999999999 9999999999999999998889988775 4
Q ss_pred C-chHHHHHHHHHHHhhhccCCCCCCCCeEEC
Q 016343 360 G-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 390 (391)
Q Consensus 360 ~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 390 (391)
+ +||++++|++.|.+||+|+++ +||+++|
T Consensus 336 g~~g~vt~~L~~~~~~~~~g~~~--~~W~~~v 365 (365)
T 2a1h_A 336 ENGPELILRFQKELKEIQYGIRA--HEWMFPV 365 (365)
T ss_dssp GGTTHHHHHHHHHHHHHHTTSSC--CTTEEEC
T ss_pred CCcCHHHHHHHHHHHHHHcCCCC--CCCeeeC
Confidence 4 799999999999999999998 8999986
No 7
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=6.2e-67 Score=516.16 Aligned_cols=295 Identities=27% Similarity=0.447 Sum_probs=266.8
Q ss_pred eecc-eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHH
Q 016343 81 CSND-YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDA 158 (391)
Q Consensus 81 ~~~~-~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~ 158 (391)
+.++ .|.||+++|++++.|++.|++||||||||||||+|+++||++++|++++|++||++||++|+||.| +.++|.++
T Consensus 26 ~~~~~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~ 105 (328)
T 3u0g_A 26 DRDGKIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAA 105 (328)
T ss_dssp SCCSEEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHH
T ss_pred cCCCEEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
Confidence 3445 799999999999999999999999999999999999889977799999999999999999999986 99999999
Q ss_pred HHHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCC-CcEEEEEEeeCCCcCC-C--cccEEEEeeccccccCCCC-
Q 016343 159 VKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAP-EYTFLVFASPVGNYFK-G--LAPLNLYVEDEFHRATPGG- 233 (391)
Q Consensus 159 i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~-~~~~~v~~~P~~~y~~-G--~~pv~l~v~~~~~R~~p~g- 233 (391)
+.++++.|.. .++||||+++.+.+.+|+.|+. .++++|++.|+++|+. + .+++++.++ ++.|..|++
T Consensus 106 i~~lv~~n~~-------~~~~iR~~vtrg~~~~g~~p~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~-~~~R~~~~~~ 177 (328)
T 3u0g_A 106 QRDVVRENKL-------ESCYLRPIIWIGSEKLGVSAKGNTIHVAIAAWPWGAYLGEEGLAKGIRVKTS-SFTRHHVNVS 177 (328)
T ss_dssp HHHHHHHTTC-------SSEEEEEEEEECSSCCSTTCCCCCEEEEEEEEECC----HHHHHHCEEEEEC-SSCCCCTTTS
T ss_pred HHHHHHhcCC-------CCeEEEEEEEecCCCCCcCCCCCCcEEEEEEEEcCCCCChhhhcCCEEEEEe-eeeecCCCCc
Confidence 9999999862 5789999987666667887654 5788999999988764 2 257888876 478999887
Q ss_pred CCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHC
Q 016343 234 AGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDC 313 (391)
Q Consensus 234 ~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~ 313 (391)
++++|+++||+++++++++|+++|+||+||+|. +|+|+|++++|||+++|++|+||+++. ||+||||++||++|+++
T Consensus 178 ~~~~K~t~nyl~~vla~~eA~~~G~~e~l~ld~--~g~v~E~~~sNif~v~~g~l~TP~~~~-iL~GitR~~vl~~a~~~ 254 (328)
T 3u0g_A 178 MVRAKASGWYVNSILANQEATADGYDEALLLDV--DGYVSEGSGENFFLVNRGKLYTPDLAS-CLDGITRDTVITLAKEA 254 (328)
T ss_dssp CTTSCBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEECCSSS-SCCCHHHHHHHHHHHHT
T ss_pred ccchhhhhhhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceeEEEEECCEEEeCCccc-cchHHHHHHHHHHHHHc
Confidence 799996679999999999999999999999997 799999999999999999999999987 99999999999999999
Q ss_pred CCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhccCCCCCCCCeEEC
Q 016343 314 GFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEI 390 (391)
Q Consensus 314 G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v 390 (391)
|++|+|++|+++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.++|+|+.+|++||+++|
T Consensus 255 g~~v~e~~i~~~eL~~adevf~tns~~~v~PV~~I--d~~~~--~~g~~g~vt~~L~~~~~~~~~g~~~~~~~W~~~v 328 (328)
T 3u0g_A 255 GIEVIEKRITRDEVYTADEAFFTGTAAEVTPIREL--DNRTI--GGGARGPITEKLQSAFFDVVNGKSAKHADWLTKI 328 (328)
T ss_dssp TCCEEECCCCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHHHHHHHHHHHHTTCCSTTGGGEEEC
T ss_pred CCeEEEEeCCHHHHhhCCEEEEEcchhhEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHcCCCCCCCCCceeC
Confidence 99999999999999999999999999999999999 57665 766 899999999999999999999999999987
No 8
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=3.9e-63 Score=485.01 Aligned_cols=292 Identities=30% Similarity=0.528 Sum_probs=265.5
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|.+++.|++.|++||||||+|||||+|+++||+ ++|++++|++||.+||++|+||.+ +.+++.+++.+++
T Consensus 9 ~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~ 87 (309)
T 1iye_A 9 IWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVI 87 (309)
T ss_dssp EEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHH
T ss_pred EEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999877883 389999999999999999999965 8999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC-C--cccEEEEeeccccccCCCCC-CCc
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK-G--LAPLNLYVEDEFHRATPGGA-GGV 237 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~-G--~~pv~l~v~~~~~R~~p~g~-g~~ 237 (391)
+.|. .+++|||+++.++...+|+.|+ .+++++|.+.|+++|+. + .+++++.+++ +.|..|+++ +.+
T Consensus 88 ~~~~-------~~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~ 159 (309)
T 1iye_A 88 RKNN-------LTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSS-WNRAAPNTIPTAA 159 (309)
T ss_dssp HHTT-------CSSEEEEEEEEECSSCSSSSCCTTCCEEEEEEEECCCCTTCTTHHHHCEEEEECS-SCCCCTTTSCTTS
T ss_pred HhcC-------CCCEEEEEEEEeCCCccCCCCCCCCCcEEEEEEEEcCccCCcccccCCeEEEEee-eeccCCCCCCccc
Confidence 9875 2578999988866667788764 36789999999988765 3 3678888764 788888764 899
Q ss_pred CccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcE
Q 016343 238 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 317 (391)
Q Consensus 238 K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V 317 (391)
|+++||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||+++++||+||||++||++|+++|++|
T Consensus 160 K~~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~~~g~~v 237 (309)
T 1iye_A 160 KAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEV 237 (309)
T ss_dssp CBGGGHHHHHHHHHHHHHTTCSEEEEECT--TSBEEEETTBEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCE
T ss_pred cchhhhHHHHHHHHHHHHcCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHcCCeE
Confidence 98779999999999999999999999997 7999999999999999999999999999999999999999999999999
Q ss_pred EEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhccCCCCCCCCeEECC
Q 016343 318 EERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 318 ~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
+|++|+++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.++|+|+.+|+++|++.|.
T Consensus 238 ~E~~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~~g~~g~~~~~l~~~~~~~~~g~~~~~~~w~~~v~ 308 (309)
T 1iye_A 238 REQVLSRESLYLADEVFMSGTAAEITPVRSV--DGIQV--GEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN 308 (309)
T ss_dssp EECCCBTTHHHHCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHHHHHHHHHGGGTTSSCCCSCCEEECC
T ss_pred EEEeCCHHHHhhCcEEEEccCCCEEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHcCCCCccCCCCeECC
Confidence 9999999999999999999999999999999 57665 665 7999999999999999999999999999873
No 9
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=6.6e-63 Score=483.34 Aligned_cols=291 Identities=31% Similarity=0.421 Sum_probs=261.3
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|.+++.|++.|++||||||+|||||+|++.||. ++|++++|++||.+||++|+||.+ +.+++.+++.+++
T Consensus 8 ~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~~ 86 (308)
T 2eiy_A 8 IWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEVV 86 (308)
T ss_dssp EEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSC-EEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred EEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcc-cccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999887887 799999999999999999999976 8999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC-C--cccEEEEeeccccccCCCCC-CCc
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK-G--LAPLNLYVEDEFHRATPGGA-GGV 237 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~-G--~~pv~l~v~~~~~R~~p~g~-g~~ 237 (391)
+.+.. +.+|||+++..++..+|+.|+ .+++++|.+.|+++|+. + .+++++.+++ +.|..|++. +.+
T Consensus 87 ~~~~~-------~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~-~~r~~~~~~~~~~ 158 (308)
T 2eiy_A 87 RRNGY-------RSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSS-WARFPANVMPGKA 158 (308)
T ss_dssp HHTTC-------SSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECS-SCBCCTTTSCTTS
T ss_pred HhCCC-------CcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEec-ceecCCCCcCcce
Confidence 98752 468999998866666787765 57889999999988764 3 3678888764 678888754 899
Q ss_pred CccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcE
Q 016343 238 KAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQV 317 (391)
Q Consensus 238 K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V 317 (391)
|+.+||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||++++ +|+||||++||++|+++|++|
T Consensus 159 Kt~~ny~~~~la~~~A~~~G~de~l~ld~--~G~V~Egs~sNif~v~~g~l~TP~~~~-iL~GitR~~ll~~a~~~g~~v 235 (308)
T 2eiy_A 159 KVGGNYVNSALAKMEAVAAGADEALLLDE--EGYVAEGSGENLFFVRDGVIYALEHSV-NLEGITRDSVIRIAKDLGYEV 235 (308)
T ss_dssp CBGGGHHHHHHHHHHHHHTTCSEEEEEBT--TSSEEEESSCEEEEEETTEEEEECCTT-SCCCHHHHHHHHHHHHTTCCE
T ss_pred ehhhhHHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCceEEEEEECCEEEeCCcCC-CCchHHHHHHHHHHHHCCCeE
Confidence 99977999999999999999999999997 799999999999999999999999988 999999999999999999999
Q ss_pred EEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhccCCCCCCCCeEECC
Q 016343 318 EERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTVEIN 391 (391)
Q Consensus 318 ~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~~v~ 391 (391)
+|++++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.++|+|+.+|+++|++.|.
T Consensus 236 ~E~~i~~~dL~~adevfltns~~gv~pV~~i--d~~~~--~~g~~g~~~~~l~~~~~~~~~~~~~~~~~w~~~v~ 306 (308)
T 2eiy_A 236 QVVRATRDQLYMADEVFMTGTAAEVTPVSMI--DWRPI--GKGTAGPVALRLREVYLEAVTGRRPEYEGWLTYVN 306 (308)
T ss_dssp EEECCCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--TTSSCCHHHHHHHHHHHHHHTTCCGGGGGGEEECC
T ss_pred EEEeCCHHHHhhCCEEEEccCcceEEEEEEE--cCEEC--CCCCCCHHHHHHHHHHHHHHcCCCCCccCCCeeCC
Confidence 9999999999999999999999999999999 57665 666 7999999999999999999999999999874
No 10
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=4.9e-57 Score=436.00 Aligned_cols=267 Identities=22% Similarity=0.362 Sum_probs=230.9
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.||+++|.+++.|++.|++||||||||||||+| +|+ +|++++|++||++||++|+||.+ +.++|.+++.+++
T Consensus 3 ~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~---~g~--~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~li 77 (277)
T 3daa_A 3 TLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVY---NGE--MFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELV 77 (277)
T ss_dssp EEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHH
T ss_pred EEECCEEeEhHHCeechhhhHHhcccEEEEEEEEE---CCE--EcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 69999999999999999999999999999999998 565 89999999999999999999965 8999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCccccc-C--CCCcEEEEEEeeCCCcCC-CcccEEEEeeccccccCCCCCCCcCc
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLA-P--APEYTFLVFASPVGNYFK-GLAPLNLYVEDEFHRATPGGAGGVKA 239 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~-p--~~~~~~~v~~~P~~~y~~-G~~pv~l~v~~~~~R~~p~g~g~~K~ 239 (391)
+.|.. +.+.+||++ ..|.++. |.. | +.+++++|++.|++++.. ..+++++.+.++ .| ...+++|+
T Consensus 78 ~~n~~-----~~~~lri~v-trG~~~r-~~~~p~~~~~~~~~i~~~p~~~~~~~~~~gv~~~~~~~-~r---~~~~~~Kt 146 (277)
T 3daa_A 78 EKNEL-----NTGHIYFQV-TRGTSPR-AHQFPENTVKPVIIGYTKENPRPLENLEKGVKATFVED-IR---WLRCDIKS 146 (277)
T ss_dssp HHHTC-----CSEEEEEEE-ESCBCSC-CSSCCSSCCCCEEEEEEEECCCCHHHHHHCEEEEEEEC-CC---CSCTTSCB
T ss_pred HhcCC-----CcEEEEEEE-EecCCCc-CCCCCCCCCCcEEEEEEEECCCChHHHhCCeEEEEecC-cc---ccCCCcch
Confidence 99863 235566653 3466543 333 3 456889999999986432 124566766543 23 23578998
Q ss_pred cCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEE
Q 016343 240 ISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEE 319 (391)
Q Consensus 240 ~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~E 319 (391)
+ ||+.+++++++|+++|+||+||+| +|+|+|++++|||+++|++|+|||++++||+||||++||++|+++|++|+|
T Consensus 147 ~-nyl~~~la~~eA~~~g~~e~l~l~---~g~v~E~~~sNif~~~~~~l~TP~~~~~iL~GitR~~vl~~~~~~g~~v~e 222 (277)
T 3daa_A 147 L-NLLGAVLAKQEAHEKGCYEAILHR---NNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKE 222 (277)
T ss_dssp S-CCHHHHHHHHHHHHTTCSEEEEEE---TTEEEEETTBEEEEEETTEEEECCSSTTSCCCHHHHHHHHHHHHTTCCEEC
T ss_pred h-hhHHHHHHHHHHHHCCCCEEEEEc---CCEEEEcCceEEEEEECCEEECCCCcCCCCccHHHHHHHHHHHHcCCeEEE
Confidence 5 999999999999999999999996 599999999999999999999999999999999999999999999999999
Q ss_pred EeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhh
Q 016343 320 RAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGI 375 (391)
Q Consensus 320 r~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~i 375 (391)
++++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.+.
T Consensus 223 ~~i~~~el~~adevf~~ns~~~i~pV~~i--d~~~~--~~g~~g~~t~~L~~~~~~~ 275 (277)
T 3daa_A 223 IPFTTHEALKMDELFVTSTTSEITPVIEI--DGKLI--RDGKVGEWTRKLQKQFETK 275 (277)
T ss_dssp CCCBHHHHHTCSEEEEEETTTEEEEEEEE--TTEES--TTSSCCHHHHHHHHHHHTT
T ss_pred EeCCHHHHHhcCeeeeecChhhEEEEEEE--CCEEC--CCCCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999 57765 766 899999999999753
No 11
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=2.6e-55 Score=421.70 Aligned_cols=261 Identities=19% Similarity=0.248 Sum_probs=231.9
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~ 164 (391)
.|.||+ .++.+++.|++||||||+|||||+| +|+ +|++++|++||.+||++|+||.++.+++.+++.++++
T Consensus 2 ~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~~~ 72 (269)
T 1i2k_A 2 FLINGH----KQESLAVSDRATQFGDGCFTTARVI---DGK--VSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAA 72 (269)
T ss_dssp EEETTE----EESCCCTTCHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCC----cCCccCccccccccceeEEEEEEEE---CCE--EecHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 588998 3578999999999999999999998 676 8899999999999999999998889999999999998
Q ss_pred HcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC--CcccEEEEeeccccccCCCCCCCcCcc
Q 016343 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK--GLAPLNLYVEDEFHRATPGGAGGVKAI 240 (391)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~--G~~pv~l~v~~~~~R~~p~g~g~~K~~ 240 (391)
.+. ..|||+.+..+.+..|+.|+ .+++++|.+.|+++|+. ..+++++.+.+ +.|..+..++.+|+.
T Consensus 73 ~~~---------~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~~-~~~~~~~~~~~~Kt~ 142 (269)
T 1i2k_A 73 EQQ---------NGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSP-VRLGRNPHLAGIKHL 142 (269)
T ss_dssp HHC---------SEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEECS-CCBCCCTTTTBCCBS
T ss_pred hCC---------CeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEec-eecCCCCcccCcchh
Confidence 642 46899988765555677765 57889999999988642 23578888764 667666678999995
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEE
Q 016343 241 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 320 (391)
Q Consensus 241 ~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er 320 (391)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+||++++++|+||||++||++|+++|++|+|+
T Consensus 143 -n~~~~~~a~~~A~~~G~de~l~ld~--~G~v~E~s~sNif~v~~g~l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~ 219 (269)
T 1i2k_A 143 -NRLEQVLIRSHLEQTNADEALVLDS--EGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEV 219 (269)
T ss_dssp -CCHHHHHHHHHHTTSSCSEEEEEBT--TSBEEECSSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEE
T ss_pred -hhHHHHHHHHHHHHCCCCEEEEECC--CCcEEEcCceEEEEEECCEEECCCCccCccCCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred eeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHH
Q 016343 321 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLV 373 (391)
Q Consensus 321 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~ 373 (391)
+++++||.+|||+|+|||+++|+||.+| +|+.+ ++ ||++++|++.|.
T Consensus 220 ~i~~~eL~~adevfltns~~gv~pV~~i--d~~~~--~~--g~~~~~l~~~~~ 266 (269)
T 1i2k_A 220 QASLEESLQADEMVICNALMPVMPVCAC--GDVSF--SS--ATLYEYLAPLCE 266 (269)
T ss_dssp CCBHHHHHTCSEEEEECSSSCEEEEEEE--TTEEC--CC--CHHHHHHHHHHH
T ss_pred ECCHHHHhhCCEEEEcCChhheEEEEEE--CCEEe--cC--cHHHHHHHHHHh
Confidence 9999999999999999999999999999 57765 53 799999999986
No 12
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=2.7e-54 Score=415.72 Aligned_cols=259 Identities=21% Similarity=0.273 Sum_probs=223.8
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~~~~~~~i~~lv 163 (391)
.|.|| .+++.|++.|++||||||+|||||+| +|+ +|++++|++||++||++|+||.| +.+++.+++.+++
T Consensus 6 ~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~---~g~--~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~ 76 (272)
T 3lul_A 6 VIEDK----GDMTPSFGIDDRIFLGEGLFETIRVN---SSK--PSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQKI 76 (272)
T ss_dssp ECCCC----C--CCCCCTTBGGGGTCEEEEEEEEE---TTE--ESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHH
T ss_pred EEECC----ccccccCCccchhhcceEeEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 68888 78889999999999999999999998 566 88999999999999999999997 9999999999999
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCCCC--cEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccC
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPE--YTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAIS 241 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~--~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~ 241 (391)
+.|.. ...|||+.+..+.+..|+.++.. ++++++ .|.. ....++++.++ ++.|+.+++++.+|++
T Consensus 77 ~~~~~-------~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~-~p~~---~~~~~v~l~~~-~~~r~~~~~~~~~Kt~- 143 (272)
T 3lul_A 77 QKDNL-------YHGGIKAILSGGPASRGLAERGQVSQLIFQT-FNYS---IQKHPVRLISI-NWLRDKANPLYQLKSV- 143 (272)
T ss_dssp HHTTC-------SSEEEEEEEECCBCCSSTTCCCSSEEEEEEE-ECCC---CCCSCEEEEEE-EEEECTTCGGGGSCBS-
T ss_pred HhcCC-------CCEEEEEEEEecCCccCcCCCCCCCcEEEEE-ECCC---CccccEEEEEE-eEEecCCCcccchhhh-
Confidence 98852 45788888775544567776543 455555 4432 22345888665 6889888889999995
Q ss_pred ChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEe
Q 016343 242 NYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERA 321 (391)
Q Consensus 242 nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~ 321 (391)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||++++||+||||++||++|+++|++|+|++
T Consensus 144 nyl~~~la~~~A~~~G~de~L~ld~--~g~v~E~~~sNif~~~~g~l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e~~ 221 (272)
T 3lul_A 144 NYLEAIIAQRQAIAVGADDALFFNT--ENHVTETTCANLFLIENNILYTPRVEDGILPGITRARLISHCQQHKMSVQEIS 221 (272)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEEET--TSBEEEESSCEEEEEETTEEEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECC
T ss_pred ccHHHHHHHHHHHHcCCCEEEEECC--CCeEEEcCCeEEEEEECCEEECCCCccCcCcCHHHHHHHHHHHHcCCeEEEEE
Confidence 9999999999999999999999997 79999999999999999999999999999999999999999999999999999
Q ss_pred eCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHhhh
Q 016343 322 IPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVGIQ 376 (391)
Q Consensus 322 i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~iq 376 (391)
|+++||.+|||+|+|||+++|+||.+| +++.+ ++ +++|++.|.+..
T Consensus 222 i~~~el~~adevf~~ns~~~v~PV~~i--d~~~~--~~-----t~~l~~~y~~~~ 267 (272)
T 3lul_A 222 LTKKRIEDADAVFLTNSLQGIRRVLSL--DNIIF--EV-----NHPIIDKLIFLL 267 (272)
T ss_dssp CBHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--CC-----CCHHHHHHHHHH
T ss_pred CCHHHHhhCCEEEEEcCchhEEEEEEE--CCEEc--ch-----HHHHHHHHHHHH
Confidence 999999999999999999999999999 57765 43 778888876543
No 13
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=2e-54 Score=420.62 Aligned_cols=261 Identities=22% Similarity=0.287 Sum_probs=230.4
Q ss_pred eEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTAL 164 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~ 164 (391)
.|.||+++ +.+++.|++||||||+|||||+| ||+ +|++++|++||++||++|+||.+ .+.+.+++.++++
T Consensus 24 ~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~~-~~~l~~~i~~~v~ 93 (292)
T 2xpf_A 24 DWVDGRPA----AELSVRDRGLAYGDGLFETLAVR---AGT--PRLLERHLARLEEGCRRLAIPLD-TAALRQELLAFCA 93 (292)
T ss_dssp EEETTEEC----SEEETTBHHHHHCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHH
T ss_pred EEECCEEE----EEEcccchhhhcCcEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHH
Confidence 68999998 78999999999999999999997 677 78899999999999999999986 8999999999998
Q ss_pred HcCCCCCCCCCccEEEEEEEEccCCcccccCC--CCcEEEEEEeeCCCcCC--CcccEEEEeeccccccCCCCCCCcCcc
Q 016343 165 ANKRWVPPPGKGSLYIRPLLVGSGPILGLAPA--PEYTFLVFASPVGNYFK--GLAPLNLYVEDEFHRATPGGAGGVKAI 240 (391)
Q Consensus 165 ~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~--~~~~~~v~~~P~~~y~~--G~~pv~l~v~~~~~R~~p~g~g~~K~~ 240 (391)
... ..|||+.+..+.+.+|+.|+ .+++++|.+.|+++++. ..+++++.+.+. .|..+..++.+|++
T Consensus 94 ~~~---------~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~-~~~~~~~~~~~Kt~ 163 (292)
T 2xpf_A 94 ALG---------DGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACRT-RLAEQPLLAGLKHL 163 (292)
T ss_dssp HHC---------SEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECCC-CBCCCTTTTBCCBS
T ss_pred hCC---------CcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEeee-eccCCCCCCCcchh
Confidence 742 35899888744345777765 46789999999988762 235788888754 45555567899985
Q ss_pred CChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEE
Q 016343 241 SNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEER 320 (391)
Q Consensus 241 ~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er 320 (391)
||+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|||+++++|+||||++||++|+++|++|+|+
T Consensus 164 -ny~~~~la~~~A~~~G~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E~ 240 (292)
T 2xpf_A 164 -NRLEQVLARAEWSDAGHAEGLMLDV--HERVVEGVFSNLLLVLDGTLVAPDLRRCGVAGVMRAELLERAEGIGVPLAIR 240 (292)
T ss_dssp -CCHHHHHHHTTCCCTTCSEEEEEBT--TCCEEEESSSEEEEEETTEEEEECCSSSSBCCHHHHHHHHHHHHTTCCEEEE
T ss_pred -hhHHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEEeCCCCCccCCCHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999999999999999997 7999999999999999999999999999999999999999999999999999
Q ss_pred eeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHh
Q 016343 321 AIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVG 374 (391)
Q Consensus 321 ~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~ 374 (391)
+|+++||.+|||+|+|||+++|+||.+| +++.+ + +||++++|++.|..
T Consensus 241 ~i~~~eL~~adevfltns~~gv~PV~~i--d~~~~--~--~g~~t~~l~~~~~~ 288 (292)
T 2xpf_A 241 DVSMAELATADEVFLCNSQFGIWPVRAL--DEHVW--P--VGELTRKLQDQLRD 288 (292)
T ss_dssp CBCHHHHHTCSEEEEEETTTEEEEEEEE--TTEEC--C--CCHHHHHHHHHHHH
T ss_pred eCCHHHHHhCCEEEEEcCcccEEEEEEE--CCEEe--C--CCHHHHHHHHHHHH
Confidence 9999999999999999999999999999 57765 4 58999999999875
No 14
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=8.2e-54 Score=414.96 Aligned_cols=273 Identities=23% Similarity=0.267 Sum_probs=234.9
Q ss_pred CceEEEEeecceEecCeeecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCC-CH
Q 016343 74 DYMYTMKCSNDYFEKGRLSRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSP-SI 152 (391)
Q Consensus 74 d~m~~~~~~~~~w~~g~i~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~-~~ 152 (391)
-|+-+.-|. |.+|++++..++.+++.|++| |||+|||||+| +|+ +|++++|++||++||++|+||.+ +.
T Consensus 9 ~~~~~~~~~---~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~ 78 (285)
T 3csw_A 9 HHHHVLIWW---RGKFRRADEISLDFSLFEKSL--QGAVYETLRTY---SRA--PFAAYKHYTRLKRSADFFNLPLSLSF 78 (285)
T ss_dssp ---CCEEEE---TTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHTTTCCCSSCH
T ss_pred ccceEEEEE---ccCceEcccccCEeCCccccc--ceeeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCCCCH
Confidence 344445565 899999999999999999999 99999999998 566 88999999999999999999966 89
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCC
Q 016343 153 DQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPG 232 (391)
Q Consensus 153 ~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~ 232 (391)
+++.+++.++++.+. +..|||+++... .++++|.+.|+++|+. .+++++.+++ +.|..+.
T Consensus 79 ~~l~~~i~~~~~~~~--------~~~~iR~~v~~~----------~~~~~i~~~p~~~~~~-~~~~~l~~~~-~~~~~~~ 138 (285)
T 3csw_A 79 DEFTKVLKAGADEFK--------QEVRIKVYLFPD----------SGEVLFVFSPLNIPDL-ETGVEVKISN-VRRIPDL 138 (285)
T ss_dssp HHHHHHHHHHHTTCS--------SCEEEEEEECTT----------TCCEEEEEEECCCCCC-TTCEEEEECS-SCCCCTT
T ss_pred HHHHHHHHHHHHhhC--------CCeEEEEEEEcC----------CCEEEEEEEeCCCccc-cCCeEEEEEe-EEecCCC
Confidence 999999999998763 347999887311 1257888999987752 3577887764 4443332
Q ss_pred -CCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHH
Q 016343 233 -GAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIAS 311 (391)
Q Consensus 233 -g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~ 311 (391)
.++++|+. ||+.+++++++|++ +||+||+|. +|+|+|++++|||+++||+|+||++++++|+||||++||++|+
T Consensus 139 ~~~~~~Kt~-~~l~~~la~~~A~~--~de~L~ld~--~G~V~Egs~sNif~v~~g~l~TP~l~~~iL~GitR~~ll~~a~ 213 (285)
T 3csw_A 139 STPPALKIT-GRTDIVLARREIVD--CYDVILLGL--NGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAK 213 (285)
T ss_dssp TSCTTCCBT-TCHHHHHHHTTCSS--SSEEEEECT--TSBEEEESSSEEEEEETTEEEEECGGGTCCCCHHHHHHHHHHH
T ss_pred CCCCccchh-ccHHHHHHHHHHHh--CCeEEEECC--CCcEEEcCceEEEEEECCEEEeCCCCCCccCCHHHHHHHHHHH
Confidence 34699997 69999999888877 999999997 7999999999999999999999999999999999999999999
Q ss_pred HCCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCC-chHHHHHHHHHHHhhhccCCCCCCCCeE
Q 016343 312 DCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTG-AQSVSRELYSTLVGIQTGLIKDNKGWTV 388 (391)
Q Consensus 312 ~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~-~g~vt~~L~~~l~~iq~g~~~d~~~W~~ 388 (391)
++|++|+|++++++||.+|||+|+|||+++|+||.+| +++.+ +++ +||++++|++.|.++|+|+. +||+.
T Consensus 214 ~~g~~v~E~~i~~~dL~~adevfltns~~gv~PV~~i--d~~~~--~~g~~g~~t~~L~~~~~~~~~~~~---~~w~~ 284 (285)
T 3csw_A 214 SLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRL--NEHSF--FEEEPGPVTATLMENFEPFVLNLE---ENWVG 284 (285)
T ss_dssp HTTCCEEEECCBHHHHHTCSEEEEEETTTEEEEEEEE--TTEES--CSSSCCHHHHHHHHHHHHHHHTCG---GGTTT
T ss_pred HCCCeEEEEeCCHHHHhhCCEEEEecCcceEEEEEEE--CCEEC--CCCCCCHHHHHHHHHHHHHHhCcC---CCCCC
Confidence 9999999999999999999999999999999999999 57765 666 79999999999999999987 68963
No 15
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.4e-53 Score=418.72 Aligned_cols=267 Identities=20% Similarity=0.326 Sum_probs=197.5
Q ss_pred eEec---Cee--ecCCCceeCcCCccccccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHH
Q 016343 85 YFEK---GRL--SRYGKIELSPSSGVLNYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAV 159 (391)
Q Consensus 85 ~w~~---g~i--~p~~~~~l~~~~~~l~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i 159 (391)
.|.| |++ +|.+++.|++.|++||||||||||||+| +|+ +|++++|++||.+||++|+||.|+.+++.+++
T Consensus 17 v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~---~G~--~~~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~i 91 (315)
T 3sno_A 17 LIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIR---DGH--ACNVRRHGERFKASAALLGLPEPILEDWEKAT 91 (315)
T ss_dssp EEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred EEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEE---CCE--ECCHHHHHHHHHHHHHHhCCCCcCHHHHHHHH
Confidence 6889 999 9999999999999999999999999998 566 78999999999999999999998999999999
Q ss_pred HHHHHHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCC--CcccEEEEeeccc-----------
Q 016343 160 KQTALANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFK--GLAPLNLYVEDEF----------- 226 (391)
Q Consensus 160 ~~lv~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~--G~~pv~l~v~~~~----------- 226 (391)
.++++.+. +..+.+..|||++++.+.+..| .++++|++.|+++++. ..+++++.+.+..
T Consensus 92 ~~~v~~~~---~~n~~~~~~iRl~vtrG~~~~g-----~p~~~v~~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~ 163 (315)
T 3sno_A 92 QMGIESWY---SHPNAGEASCTWTLSRGRSSTG-----LASGWLTITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIG 163 (315)
T ss_dssp HHHHHHHH---TC--CCCEEEEEEEECCBTTTC-----CCEEEEEEEECCHHHHHHHHHCEEEEEEEC------------
T ss_pred HHHHHhhc---ccCCCCCEEEEEEEEeCCCCCC-----CCEEEEEEEECCCcchhhhcCCEEEEEecccccccccccccc
Confidence 99998732 1111357899998874433333 3578888999876542 1245666655421
Q ss_pred -----------cccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCC
Q 016343 227 -----------HRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSG 295 (391)
Q Consensus 227 -----------~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~ 295 (391)
.|..|++++++|++ ||+.+++++++|+++|+||+||+|. +| |+|++++|||+++||+|+|||++.
T Consensus 164 ~~~r~~~s~~~~~~~p~~l~~~Kt~-nyl~~vla~~~A~~~G~de~l~l~~--~G-v~E~s~sN~f~~~~g~l~TPp~~~ 239 (315)
T 3sno_A 164 KATRGELSKVERTPAPWLTVGAKTL-AYAANMAALRYAKSNGFDDVIFTDG--DR-VLEGATSTVVSFKGDKIRTPSPGG 239 (315)
T ss_dssp ------------------------------------------CEEEEEEET--TE-EEEESSSEEEEEETTEEEEECCC-
T ss_pred ccccccccccccccCcccccCcchh-ccHHHHHHHHHHHHcCCCEEEEEeC--CC-cEEcCCeeEEEEECCEEEcCCCCC
Confidence 13456667899997 9999999999999999999999997 79 999999999999999999999999
Q ss_pred CccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCceEEeEEEEeCCeEEeeCCCchHHHHHHHHHHHh
Q 016343 296 TILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPVGSITYRGKRIEFKTGAQSVSRELYSTLVG 374 (391)
Q Consensus 296 ~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV~~I~~~g~~~~~~~~~g~vt~~L~~~l~~ 374 (391)
+||+||||++|+++|+++|++|+|+.++++||.+|||+|+|||+++|+||.+| +|+.+ + .++++++|++.|..
T Consensus 240 ~iL~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfl~ns~~gv~pV~~i--d~~~~--~--~~~~~~~l~~~~~~ 312 (315)
T 3sno_A 240 DILPGTTQAALFAHATEKGWRCKEKDLSIDDLFGADSVWLVSSVRGPVRVTRL--DGHKL--R--KPDNEKEIKALITK 312 (315)
T ss_dssp -----HHHHHHHHHHHHTTCEEEEECCBHHHHHHSSEEEEEETTTEEEEEEEE--SSSCC--C--CCTTHHHHHHHHHH
T ss_pred CcChhHHHHHHHHHHHHcCCEEEEEECCHHHHHhCCeeEEEcCcccEEEEEEE--CCEEC--C--CChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 57665 4 57899999998875
No 16
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=3.5e-47 Score=360.87 Aligned_cols=226 Identities=19% Similarity=0.254 Sum_probs=191.9
Q ss_pred eEecCeeecCCCceeCcCCccccc-cCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Q 016343 85 YFEKGRLSRYGKIELSPSSGVLNY-GQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTA 163 (391)
Q Consensus 85 ~w~~g~i~p~~~~~l~~~~~~l~y-G~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv 163 (391)
.|.||+.. +++.|++||| |+|+|||||+| +|+ +|++++|++||.+||++|+||.|..+++.+.+.+++
T Consensus 2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~---~G~--~~~l~~Hl~RL~~Sa~~l~~~~p~~~~l~~~i~~~~ 70 (246)
T 2zgi_A 2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAE---GGR--PLWLEEHLARLRRHALALGLSYPGDEAFLEDLEALL 70 (246)
T ss_dssp EEETTEEC------CCSSCHHHHHSCCCEEEEEEEE---TTE--ETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred EEECCccc------CCCccCcccccCeeEEEEEEEE---CCE--eCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 47899855 3899999999 99999999998 565 889999999999999999999774488999999998
Q ss_pred HHcCCCCCCCCCccEEEEEEEEccCCcccccCCCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccCCh
Q 016343 164 LANKRWVPPPGKGSLYIRPLLVGSGPILGLAPAPEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAISNY 243 (391)
Q Consensus 164 ~~~~~~vp~~~~~~lyIRp~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY 243 (391)
+.|. +.+.+|||+++..++..+|+.|.+ .+..+++. +++++.+.+ + |..|+ ++.+|+. ||
T Consensus 71 ~~~~------~~~~~~vR~~v~~g~~~~~~~p~~--------~~~~~~~~--~g~~l~~~~-~-r~~~~-~~~~Kt~-n~ 130 (246)
T 2zgi_A 71 RAFP------KAPCLRLRFTVGEGVRLSEARPYA--------PLPLSLYR--EGVRVRLTG-Y-RVHPD-LARYKTG-NY 130 (246)
T ss_dssp TSCT------TCSEEEEEEEEETTEEEEEEEECC--------CCCTHHHH--HCBCEEEEE-E-ECCTT-TTTSCBS-CC
T ss_pred HhcC------CCCCEEEEEEEECCCCccCcCcCC--------CCchhHhh--cCeEEEEec-c-cCCCC-Cccchhh-hh
Confidence 8762 135789999887554444442211 01111222 356677765 4 88887 8899997 89
Q ss_pred HHHHHHHHHHHhCCCceEEEEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeC
Q 016343 244 APVLKAISRAKNRGFSDVLYLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIP 323 (391)
Q Consensus 244 ~~~l~a~~~A~~~G~dd~L~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~ 323 (391)
+.+++++++|+++|+||+||+|. +|+|+|++++|||+++||+|+|| .++|+||||++||++|+++|++|+|++++
T Consensus 131 ~~~~~a~~~A~~~g~de~l~ld~--~G~v~Egs~sNif~v~~g~l~TP---~~iL~GitR~~ll~~a~~~g~~v~E~~i~ 205 (246)
T 2zgi_A 131 LPYRLALEEARKEGAFEGLLLDA--FGHVVDGSRTSPLLFREGTLYLL---EGGLEGITREKVAEAARGLGLRVERGLFR 205 (246)
T ss_dssp HHHHHHHHHHHTTTCSEEEEECT--TSCEEEESSSEEEEEETTEEEEE---CSSCCCHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCEEEEECC--CCCEEEcCCeEEEEEECCEEECC---CCccCcHHHHHHHHHHHHCCCeEEEEeCC
Confidence 99999999999999999999997 79999999999999999999999 78999999999999999999999999999
Q ss_pred HHhHhccceeEEEcCcCceEEeEEE
Q 016343 324 VDELLEADEVFCTGTAVVVAPVGSI 348 (391)
Q Consensus 324 ~~eL~~adEvf~tgTa~~I~PV~~I 348 (391)
++||.+ |+|+|||+++|+||.+|
T Consensus 206 ~~dL~~--evfltns~~gi~pV~~i 228 (246)
T 2zgi_A 206 PEGLRG--HLLLAGSGVGLLPVRPP 228 (246)
T ss_dssp GGGCCS--EEEEEETTTEEEEBSSC
T ss_pred HHHHHh--hHeeecChhheEEEEEE
Confidence 999998 99999999999999988
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=2.6e-42 Score=322.81 Aligned_cols=207 Identities=17% Similarity=0.167 Sum_probs=182.1
Q ss_pred cccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHcCCCCCCCCCccEEEEEEEEc
Q 016343 107 NYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGAERMCMPSPSIDQFIDAVKQTALANKRWVPPPGKGSLYIRPLLVG 186 (391)
Q Consensus 107 ~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa~~l~ip~~~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp~~~g 186 (391)
.-|+|+|||||+| ++|+ +|++++|++||.+||++|+||. +.+++.+++.++++ +. .+.+|||+++..
T Consensus 13 ~~g~glFEtir~~--~~G~--~~~l~~Hl~RL~~Sa~~l~~~~-~~~~l~~~i~~~~~-~~-------~~~~~iR~~~~~ 79 (221)
T 3qqm_A 13 TADFELIETMRWQ--PGTS--FLRFDRHLARLYGSAAELGFAC-DPQRIAEVLSDALD-GA-------RTAMRTRLALAR 79 (221)
T ss_dssp TSCCEEEEEEEEE--TTTE--ETTHHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHHT-TC-------CSCEEEEEEEET
T ss_pred CCCCEEEEEEEEe--cCCc--CcCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHHHHHh-cC-------CCCEEEEEEEEc
Confidence 3588999999998 3676 7899999999999999999996 78999999999986 32 357899998875
Q ss_pred cCCcccccCCCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEEEEeC
Q 016343 187 SGPILGLAPAPEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVLYLDS 266 (391)
Q Consensus 187 ~~~~lg~~p~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L~ld~ 266 (391)
++ .+.|.+.|+++++. .+++++.+++ +.|..++.+.++|+. ||+.+.+++++|+++|+||+||+|.
T Consensus 80 ~g-----------~~~i~~~p~~~~~~-~~~~~l~~~~-~~~~~~~~~~~~Kt~-nr~~~~~a~~~a~~~g~~e~l~l~~ 145 (221)
T 3qqm_A 80 NG-----------DATASAQPYEPLAA-DKVWILRLAR-TRLDSQNTLLRHKTS-RRQLYTHARSEYLVTQADEVLLANE 145 (221)
T ss_dssp TS-----------CEEEEEEECCCCCT-TCCEEEEECS-CCBCTTCGGGGSCBS-CCHHHHHHHHTSCTTTCSEEEEEBT
T ss_pred CC-----------CEEEEEEcCCCCCC-CCCEEEEEee-eEecCCCcchhchhc-chHHHHHHHHHHHhcCCcEEEEECC
Confidence 43 36678889887653 2567888775 567777788999995 9999999999999999999999997
Q ss_pred CCCCeEEeecceeEEEEeC-CEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCceEEe
Q 016343 267 VNKKNLEEVSSCNIFILKG-NIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVVAPV 345 (391)
Q Consensus 267 ~~~g~I~E~s~sNif~v~~-~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I~PV 345 (391)
+|+|+|++++|||++++ ++|+|||++.++|+||||+++|+++ +|+|++|+++||.+|||+|+|||+++|+||
T Consensus 146 --~g~v~E~s~sNif~~~~~~~l~TP~~~~~~L~GitR~~ll~~~-----~v~e~~i~~~~L~~adevf~~ns~~gi~pV 218 (221)
T 3qqm_A 146 --RGEICEGTITNVFADFGDGVLATPRLDCGLLPGVLRAELLDEG-----RAEEAIYSYDDLKSAKALFVGNSLRGLIPA 218 (221)
T ss_dssp --TSCEEEESSCEEEEECSSSCEEEECGGGTCCCCHHHHHHHHTT-----SEEEECCCHHHHTTCSEEEEEETTTEEEEE
T ss_pred --CCeEEEcCceeEEEEeCCCEEECCCCccCcchHHHHHHHHhhC-----cEEEEeCCHHHHHhCCEEEEEecceeEEEE
Confidence 79999999999999998 9999999999999999999999974 899999999999999999999999999999
Q ss_pred EE
Q 016343 346 GS 347 (391)
Q Consensus 346 ~~ 347 (391)
.-
T Consensus 219 ~l 220 (221)
T 3qqm_A 219 KL 220 (221)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=6.3e-39 Score=293.60 Aligned_cols=189 Identities=14% Similarity=0.127 Sum_probs=154.2
Q ss_pred cccCeEEEEEEEEEecCCeEeeeChHHHHHHHHHHH-HHcCCC--CC-CHHHHHHHHHHHHHHcCCCCCCCCCccEEEEE
Q 016343 107 NYGQGLFEGMKAYRKEDGQLVLFRPDQNAIRLQTGA-ERMCMP--SP-SIDQFIDAVKQTALANKRWVPPPGKGSLYIRP 182 (391)
Q Consensus 107 ~yG~~vFEt~kay~~~dG~i~lFr~~~H~~RL~~Sa-~~l~ip--~~-~~~~~~~~i~~lv~~~~~~vp~~~~~~lyIRp 182 (391)
+||+++|||||+| +|+ +|++++|++||.+|| ++|+|| .+ +.+++.+++. +++.+. .+.+|||+
T Consensus 2 ~~g~~vfEt~r~~---~g~--~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~-------~~~~~iR~ 68 (194)
T 3ceb_A 2 MWQFPLFETILIE---QGQ--AKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHR-------EGLIRCRI 68 (194)
T ss_dssp CTTCCEEEEEEEE---TTE--ECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCS-------SSEEEEEE
T ss_pred CCCCeEEEEEEEE---CCE--ecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCC-------CCCEEEEE
Confidence 6999999999998 676 889999999999999 999999 44 8899999888 777654 36899998
Q ss_pred EEEccCCcccccCCCCcEEEEEEeeCCCcCCCcccEEEEeeccccccCCCCCCCcCccCChHHHHHHHHHHHhCCCceEE
Q 016343 183 LLVGSGPILGLAPAPEYTFLVFASPVGNYFKGLAPLNLYVEDEFHRATPGGAGGVKAISNYAPVLKAISRAKNRGFSDVL 262 (391)
Q Consensus 183 ~~~g~~~~lg~~p~~~~~~~v~~~P~~~y~~G~~pv~l~v~~~~~R~~p~g~g~~K~~~nY~~~l~a~~~A~~~G~dd~L 262 (391)
++..+. ++ +...|.++. ++...+ ....+..++++|+. ||+ ++++.+|+++|+||+|
T Consensus 69 ~~~~g~--~~----------~~~~p~~~~--~~~~~~-------~~~~~~~~~~~Kt~-n~~--~~~~~~A~~~g~de~l 124 (194)
T 3ceb_A 69 DYNHHD--YV----------LQCFPYQQK--VYRTFK-------PVFCDHIDYSLKFS-DRT--LLNNLLKQKEECDEIM 124 (194)
T ss_dssp EECSSC--EE----------EEEEEECCC--CCCCEE-------EEECSSCCCSSCBS-CCH--HHHHHHGGGTTSSEEE
T ss_pred EEeCCc--cE----------EEEecCCCC--cEEEEE-------EecCCCcchhhccc-CHH--HHHHHHHhhCCCCEEE
Confidence 775431 11 223332211 221111 11234467899985 898 5688899999999999
Q ss_pred EEeCCCCCeEEeecceeEEEEeCCEEEccCCCCCccccHHHHHHHHHHHHCCCcEEEEeeCHHhHhccceeEEEcCcCce
Q 016343 263 YLDSVNKKNLEEVSSCNIFILKGNIISTPATSGTILAGITRKSIIEIASDCGFQVEERAIPVDELLEADEVFCTGTAVVV 342 (391)
Q Consensus 263 ~ld~~~~g~I~E~s~sNif~v~~~~l~TP~l~~~iL~GITR~silela~~~G~~V~Er~i~~~eL~~adEvf~tgTa~~I 342 (391)
|+ . +|+|+|++++|||+++||+|+||+ .++|+||||++||+ +++|+|++|+++||.+|||+|+|||+++|
T Consensus 125 ~l-~--~G~v~E~s~sNif~~~~g~l~TP~--~~~L~GitR~~ll~-----~~~v~e~~i~~~eL~~adevfl~ns~~gi 194 (194)
T 3ceb_A 125 II-R--QGKVTDCSIGNLIFRQNNQWITPD--KPLLEGTQRAKLLE-----QKKIIAREIFFEDLAQYEEIRLINAMNGL 194 (194)
T ss_dssp EE-E--TTEECCCSSSEEEEEETTEEEEES--SCSSCCHHHHHHHH-----TTSSEEECCBGGGGGGCSCEEEEBTTBCC
T ss_pred EE-e--CCEEEEeccEEEEEEECCEEECCC--CCCcChHHHHHHHc-----CCCEEEecCCHHHHhhccEEEEEecccCC
Confidence 99 5 799999999999999999999999 69999999999998 57999999999999999999999999875
No 19
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=20.80 E-value=1e+02 Score=24.75 Aligned_cols=45 Identities=13% Similarity=0.234 Sum_probs=32.8
Q ss_pred CCccccHHHH-HHHHHHHHCCCcEEE---------EeeCHHhHhccceeEEEcCc
Q 016343 295 GTILAGITRK-SIIEIASDCGFQVEE---------RAIPVDELLEADEVFCTGTA 339 (391)
Q Consensus 295 ~~iL~GITR~-silela~~~G~~V~E---------r~i~~~eL~~adEvf~tgTa 339 (391)
.||-...+-. .|-+.|+++|+++.. ..++.+|+.+||-|++.+..
T Consensus 16 tGiAHTyMAAeaL~~aA~~~G~~ikVEtqGs~G~~n~Lt~~~I~~Ad~VIiA~d~ 70 (111)
T 2kyr_A 16 MGLAHTFMAAQALEEAAVEAGYEVKIETQGADGIQNRLTAQDIAEATIIIHSVAV 70 (111)
T ss_dssp SCHHHHHHHHHHHHHHHHHTSSEEEEEEEETTEEESCCCHHHHHHCSEEEEEESS
T ss_pred CcHHHHHHHHHHHHHHHHHCCCeEEEEecCCCCcCCCCCHHHHHhCCEEEEEeCC
Confidence 4555555544 444568889987654 36999999999999988875
Done!