BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016347
(391 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 136/319 (42%), Positives = 198/319 (62%), Gaps = 8/319 (2%)
Query: 10 RRDSPRNRVPEVD-EEFSGIH--NVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK 66
RR P++ +V EE +H +K +S +EL +A+D+FS N +G GGFG VYKGRL
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 67 DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENN 125
DG + A+K L E QG + +F TE+++IS H NL++L G C+ R+LVY Y+ N
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 126 SLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKD 185
S+A L S W R RI +G ARGLA+LH+ P IIHRD+KA+NILLD++
Sbjct: 121 SVASCL--RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 178
Query: 186 LTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ DFGLAKL+ HV V GTIG++APEY G+ + K D++ +GV+L+E+++
Sbjct: 179 FEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT 238
Query: 246 GRCNTNM-RLPTEEQ-YLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQ 303
G+ ++ RL ++ LL+ L + ++L LVD L G++ EE + ++V LLCTQ
Sbjct: 239 GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQ 298
Query: 304 DTPKLRPSMSTVVQMLMGE 322
+P RP MS VV+ML G+
Sbjct: 299 SSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 241 bits (615), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 132/314 (42%), Positives = 191/314 (60%), Gaps = 10/314 (3%)
Query: 12 DSPRNRVPEVDEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA 71
D P PEV + +K +S +EL +A+D+F N +G GGFG VYKGRL DG +
Sbjct: 3 DVPAEEDPEVH-----LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLV 57
Query: 72 AIKVLSAESRQGVK-EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQT 130
A+K L E QG + +F TE+++IS H NL++L G C+ R+LVY Y+ N S+A
Sbjct: 58 AVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASC 117
Query: 131 LIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKI 190
L S W R RI +G ARGLA+LH+ P IIHRD+KA+NILLD++ +
Sbjct: 118 L--RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175
Query: 191 SDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNT 250
DFGLAKL+ HV V G IG++APEY G+ + K D++ +GV+L+E+++G+
Sbjct: 176 GDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
Query: 251 NM-RLPTEEQ-YLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKL 308
++ RL ++ LL+ L + ++L LVD L G++ EE + ++V LLCTQ +P
Sbjct: 236 DLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPME 295
Query: 309 RPSMSTVVQMLMGE 322
RP MS VV+ML G+
Sbjct: 296 RPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 172/304 (56%), Gaps = 10/304 (3%)
Query: 21 VDEEFSGIHNVKLYSYK----ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVL 76
+++ S + V SY+ +L AT++F IG G FG VYKG L+DG A+K
Sbjct: 12 INDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR 71
Query: 77 SAESRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGH 136
+ ES QG++EF TEI+ +S H +LV L G C E N IL+Y Y+EN +L + L G
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD- 130
Query: 137 HYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA 196
+ SW R ICIG ARGL +LH IIHRD+K+ NILLD++ PKI+DFG++
Sbjct: 131 -LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186
Query: 197 KL-IPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLP 255
K + TH+ V GT+GY+ PEY I+G++T K+D+YSFGV+L E++ R LP
Sbjct: 187 KKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 256 TEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 315
E L E + + +L +VD +L E +F + C + + RPSM V
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
Query: 316 VQML 319
+ L
Sbjct: 307 LWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 191 bits (484), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 171/304 (56%), Gaps = 10/304 (3%)
Query: 21 VDEEFSGIHNVKLYSYK----ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVL 76
+++ S + V SY+ +L AT++F IG G FG VYKG L+DG A+K
Sbjct: 12 INDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRR 71
Query: 77 SAESRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGH 136
+ ES QG++EF TEI+ +S H +LV L G C E N IL+Y Y+EN +L + L G
Sbjct: 72 TPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSD- 130
Query: 137 HYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA 196
+ SW R ICIG ARGL +LH IIHRD+K+ NILLD++ PKI+DFG++
Sbjct: 131 -LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGIS 186
Query: 197 KL-IPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLP 255
K TH+ V GT+GY+ PEY I+G++T K+D+YSFGV+L E++ R LP
Sbjct: 187 KKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP 246
Query: 256 TEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 315
E L E + + +L +VD +L E +F + C + + RPSM V
Sbjct: 247 REMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
Query: 316 VQML 319
+ L
Sbjct: 307 LWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 171/305 (56%), Gaps = 37/305 (12%)
Query: 34 YSYKELSIATDDFS--PI----NKIGEGGFGSVYKGRLKDGKIAAIKVLSA----ESRQG 83
+S+ EL T++F PI NK+GEGGFG VYKG + + +A +K L+A + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTEEL 73
Query: 84 VKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL--IGGGHHYSNI 141
++F EI+V+++ +HENLV+L G +G+ LVY Y+ N SL L + G
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-----TP 128
Query: 142 QFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPA 201
SW R +I G A G+ FLHE H IHRDIK++NILLD+ T KISDFGLA+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 202 -NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT---- 256
T + +R+ GT Y+APE A+RG++T K+DIYSFGV+L+EI++G LP
Sbjct: 186 FAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-------LPAVDEH 237
Query: 257 -EEQYLLERTWDLYERRELIL-LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMST 314
E Q LL+ ++ + + I +D +N D D+ V C + RP +
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 315 VVQML 319
V Q+L
Sbjct: 297 VQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 170/305 (55%), Gaps = 37/305 (12%)
Query: 34 YSYKELSIATDDFS--PI----NKIGEGGFGSVYKGRLKDGKIAAIKVLSA----ESRQG 83
+S+ EL T++F PI NK+GEGGFG VYKG + + +A +K L+A + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTEEL 73
Query: 84 VKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL--IGGGHHYSNI 141
++F EI+V+++ +HENLV+L G +G+ LVY Y+ N SL L + G
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-----TP 128
Query: 142 QFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPA 201
SW R +I G A G+ FLHE H IHRDIK++NILLD+ T KISDFGLA+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 202 -NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT---- 256
T + R+ GT Y+APE A+RG++T K+DIYSFGV+L+EI++G LP
Sbjct: 186 FAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-------LPAVDEH 237
Query: 257 -EEQYLLERTWDLYERRELIL-LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMST 314
E Q LL+ ++ + + I +D +N D D+ V C + RP +
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 315 VVQML 319
V Q+L
Sbjct: 297 VQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/305 (38%), Positives = 169/305 (55%), Gaps = 37/305 (12%)
Query: 34 YSYKELSIATDDFS--PI----NKIGEGGFGSVYKGRLKDGKIAAIKVLSA----ESRQG 83
+S+ EL T++F PI NK+GEGGFG VYKG + + +A +K L+A + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTEEL 67
Query: 84 VKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL--IGGGHHYSNI 141
++F EI+V+++ +HENLV+L G +G+ LVY Y+ N SL L + G
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-----TP 122
Query: 142 QFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPA 201
SW R +I G A G+ FLHE H IHRDIK++NILLD+ T KISDFGLA+
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 202 NMTHV-STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT---- 256
V R+ GT Y+APE A+RG++T K+DIYSFGV+L+EI++G LP
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG-------LPAVDEH 231
Query: 257 -EEQYLLERTWDLYERRELIL-LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMST 314
E Q LL+ ++ + + I +D +N D D+ V C + RP +
Sbjct: 232 REPQLLLDIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 315 VVQML 319
V Q+L
Sbjct: 291 VQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 157 bits (397), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 165/306 (53%), Gaps = 37/306 (12%)
Query: 34 YSYKELSIATDDFS--PI----NKIGEGGFGSVYKGRLKDGKIAAIKVLSA----ESRQG 83
+S+ EL T++F PI NK GEGGFG VYKG + + +A +K L+A + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVA-VKKLAAMVDITTEEL 64
Query: 84 VKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL--IGGGHHYSNI 141
++F EI+V ++ +HENLV+L G +G+ LVY Y N SL L + G
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG-----TP 119
Query: 142 QFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPA 201
SW R +I G A G+ FLHE H IHRDIK++NILLD+ T KISDFGLA+
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 202 NMTHV-STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT---- 256
V +R+ GT Y APE A+RG++T K+DIYSFGV+L+EI++G LP
Sbjct: 177 FAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG-------LPAVDEH 228
Query: 257 -EEQYLLERTWDLYERRELIL-LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMST 314
E Q LL+ ++ + + I +D N D D+ V C + RP +
Sbjct: 229 REPQLLLDIKEEIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKK 287
Query: 315 VVQMLM 320
V Q+L
Sbjct: 288 VQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 8/210 (3%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQG--VKEFLTEIQVIS 95
++ I D + KIG G FG+V++ G A+K+L + V EFL E+ ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+ H N+V G + + +V YL SL + L G + Q R R + +
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG---AREQLDERRRLSMAYDV 146
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
A+G+ +LH P I+HRD+K+ N+L+DK T K+ DFGL++L A+ S AGT
Sbjct: 147 AKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
++APE K+D+YSFGV+L E+ +
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 8/210 (3%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQG--VKEFLTEIQVIS 95
++ I D + KIG G FG+V++ G A+K+L + V EFL E+ ++
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+ H N+V G + + +V YL SL + L G + Q R R + +
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSG---AREQLDERRRLSMAYDV 146
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
A+G+ +LH P I+HR++K+ N+L+DK T K+ DFGL++L A+ S AGT
Sbjct: 147 AKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL-KASTFLSSKSAAGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
++APE K+D+YSFGV+L E+ +
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 7 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 65
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 66 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 120
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 121 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 177
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 10 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 68
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 69 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 123
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 124 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 180
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 181 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 74 EEPIXI-VTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 125
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 186 SDVWSFGILLTELTT 200
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 3 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 61
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 62 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 116
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 117 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 173
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 174 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 9 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 67
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 68 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 122
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 123 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 179
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 180 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 59
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 114
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 115 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 171
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 2 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 60
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 61 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 115
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 116 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 172
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 173 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 59
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 114
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 115 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK 171
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 7 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 65
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 66 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 120
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 121 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 177
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 6 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 64
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 65 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 119
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 120 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 176
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 177 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I++ Y+ SL L G Y + + IA G+A++ R +
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 135
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 77 EEPIYI-VTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 128
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 188
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 189 SDVWSFGILLTELTT 203
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ +I HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 135
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 11 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 69
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 70 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 124
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 125 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 181
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 182 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 81 EEPIYI-VTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYVE---RMNY 132
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 193 SDVWSFGILLTELTT 207
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 9/214 (4%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEI 91
K + E + + + ++G G FG V+ G A+K L S FL E
Sbjct: 1 KPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEA 59
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++ +++H+ LV+LY + I+ Y+EN SL L S I+ + +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDM 114
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IA G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N
Sbjct: 115 AAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK 171
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE G T K+D++SFG+LL EIV+
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I++ Y+ SL L G Y + + IA G+A++ R +
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 135
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI 97
E + + + ++G G FG V+ G A+K L S FL E ++ ++
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 60
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H+ LV+LY + I+ Y+EN SL L S I+ + + IA
Sbjct: 61 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 115
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+AF+ E + IHRD++A+NIL+ L+ KI+DFGLA+LI N I +
Sbjct: 116 GMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 172
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
APE G T K+D++SFG+LL EIV+
Sbjct: 173 APEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 75 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 126
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 187 SDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 73 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 124
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 184
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 185 SDVWSFGILLTELTT 199
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 81 EEPIYI-VTEYMNKGSLLDFLKGETGKYLRLP----QLVDMSAQIASGMAYVE---RMNY 132
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 192
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 193 SDVWSFGILLTELTT 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 250 EEPIYI-VTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 301
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 250 EEPIYI-VTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 301
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 135
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 84 EEPIYI-VCEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 135
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 250 EEPIYI-VGEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 301
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 361
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 362 SDVWSFGILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E +V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 333 E-EPIYIVTEYMSKGSLLDFLKGETGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 384
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 444
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 445 SDVWSFGILLTELTT 459
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 84 EEPIYI-VTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 135
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD+ A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 9/208 (4%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI 97
E + + + ++G G FG V+ G A+K L S FL E ++ ++
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 61
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H+ LV+LY + I+ Y+EN SL L S I+ + + IA
Sbjct: 62 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAE 116
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+AF+ E + IHR+++A+NIL+ L+ KI+DFGLA+LI N I +
Sbjct: 117 GMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 173
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
APE G T K+D++SFG+LL EIV+
Sbjct: 174 APEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ L L G Y + + IA G+A++ R +
Sbjct: 84 EEPIYI-VMEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 135
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + + FL E QV+ ++ HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E I V Y+ L L G Y + + IA G+A++ R +
Sbjct: 84 EEPIYI-VTEYMSKGCLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 135
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGLA+LI N I + APE A+ G+ T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 196 SDVWSFGILLTELTT 210
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 26/222 (11%)
Query: 30 NVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLT 89
++ + YKE+ + +G G FG V K + + K AIK + +ES + K F+
Sbjct: 2 SLHMIDYKEIEVE-------EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIV 51
Query: 90 EIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGG---GHHYSNIQFSWR 146
E++ +S + H N+VKLYG C+ N LV Y E SL L G ++ + SW
Sbjct: 52 ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW- 108
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLIPANMTH 205
C+ ++G+A+LH +IHRD+K N+LL T KI DFG A I +MT+
Sbjct: 109 -----CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN 163
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
G+ ++APE + K D++S+G++L E+++ R
Sbjct: 164 NK----GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 201
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 26/222 (11%)
Query: 30 NVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLT 89
++ + YKE+ + +G G FG V K + + K AIK + +ES + K F+
Sbjct: 1 SLHMIDYKEIEVE-------EVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIV 50
Query: 90 EIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGG---GHHYSNIQFSWR 146
E++ +S + H N+VKLYG C+ N LV Y E SL L G ++ + SW
Sbjct: 51 ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW- 107
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLIPANMTH 205
C+ ++G+A+LH +IHRD+K N+LL T KI DFG A I +MT+
Sbjct: 108 -----CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN 162
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
G+ ++APE + K D++S+G++L E+++ R
Sbjct: 163 NK----GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRR 200
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G+G FG V+ G AIK L + FL E QV+ ++ HE LV+LY
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E +V Y+ SL L G Y + + IA G+A++ R +
Sbjct: 251 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP----QLVDMAAQIASGMAYVE---RMNY 302
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRK 230
+HRD++A+NIL+ ++L K++DFGL +LI N I + APE A+ G+ T K
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK 362
Query: 231 ADIYSFGVLLVEIVS 245
+D++SFG+LL E+ +
Sbjct: 363 SDVWSFGILLTELTT 377
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 138/296 (46%), Gaps = 42/296 (14%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRL-KDGKIAAIKVLSAESRQG-------VKEFLTEI 91
++A ++ +IG+GGFG V+KGRL KD + AIK L +G +EF E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++S + H N+VKLYG N +V ++ L L+ H W + R+
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRL 127
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILL-----DKDLTPKISDFGLAKLIPANMTHV 206
+ IA G+ ++ + P I+HRD+++ NI L + + K++DFGL++ H
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHS 182
Query: 207 STRVAGTIGYLAPEY--AIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLER 264
+ + G ++APE A T KAD YSF ++L I++G P +E
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG------PFDEYS---- 232
Query: 265 TWDLYERRELILLV-DTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
Y + + I ++ + L + R V LC PK RP S +V+ L
Sbjct: 233 ----YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 104/205 (50%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I + I ++G G FG V+ G AIK L + + FL E Q++ +++H+
Sbjct: 6 IPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHD 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LY E I V Y+ SL L G + + +A G+A
Sbjct: 65 KLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKLP----NLVDMAAQVAAGMA 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
++ R + IHRD++++NIL+ L KI+DFGLA+LI N I + APE
Sbjct: 120 YIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPE 176
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
A+ G+ T K+D++SFG+LL E+V+
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 9/207 (4%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE 98
+ I + + + +IG G FG V+ G + AIK + E +F+ E +V+ ++
Sbjct: 22 MVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLS 80
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H LV+LYG C+E LV+ ++E+ L+ L F+ T +C+ + G
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEG 135
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
+A+L E +IHRD+ A N L+ ++ K+SDFG+ + + + ST + + +
Sbjct: 136 MAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS 192
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVS 245
PE + + K+D++SFGVL+ E+ S
Sbjct: 193 PEVFSFSRYSSKSDVWSFGVLMWEVFS 219
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I + + + +IG G FG V+ G + AIK + E ++F+ E +V+ ++ H
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C+E LV+ ++E+ L+ L F+ T +C+ + G+A
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMA 115
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L E +IHRD+ A N L+ ++ K+SDFG+ + + + ST + + +PE
Sbjct: 116 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 172
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E+ S
Sbjct: 173 VFSFSRYSSKSDVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I + + + +IG G FG V+ G + AIK + E ++F+ E +V+ ++ H
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C+E LV+ ++E+ L+ L F+ T +C+ + G+A
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMA 120
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L E +IHRD+ A N L+ ++ K+SDFG+ + + + ST + + +PE
Sbjct: 121 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 177
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E+ S
Sbjct: 178 VFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I + + + +IG G FG V+ G + AIK + E ++F+ E +V+ ++ H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C+E LV+ ++E+ L+ L F+ T +C+ + G+A
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMA 117
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L E +IHRD+ A N L+ ++ K+SDFG+ + + + ST + + +PE
Sbjct: 118 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E+ S
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 42/296 (14%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRL-KDGKIAAIKVLSAESRQG-------VKEFLTEI 91
++A ++ +IG+GGFG V+KGRL KD + AIK L +G +EF E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++S + H N+VKLYG N +V ++ L L+ H W + R+
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRL 127
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILL-----DKDLTPKISDFGLAKLIPANMTHV 206
+ IA G+ ++ + P I+HRD+++ NI L + + K++DFG ++ H
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHS 182
Query: 207 STRVAGTIGYLAPEY--AIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLER 264
+ + G ++APE A T KAD YSF ++L I++G P +E
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG------PFDEYS---- 232
Query: 265 TWDLYERRELILLV-DTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
Y + + I ++ + L + R V LC PK RP S +V+ L
Sbjct: 233 ----YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 127/288 (44%), Gaps = 26/288 (9%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE 98
+ + ++ + + ++G G FG V G+ K A+K++ E EF E Q + ++
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLS 61
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H LVK YG C + +V Y+ N L L G Q +C + G
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL-----EMCYDVCEG 116
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
+AFL IHRD+ A N L+D+DL K+SDFG+ + + + S + + A
Sbjct: 117 MAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA 173
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLV 278
PE + + K+D+++FG+L+ E+ S L + +DLY E++L V
Sbjct: 174 PEVFHYFKYSSKSDVWAFGILMWEVFS---------------LGKMPYDLYTNSEVVLKV 218
Query: 279 DTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML--MGEKD 324
+ ++ C + P+ RP+ ++ + + EKD
Sbjct: 219 SQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 107/205 (52%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I + + + +IG G FG V+ G + AIK + E ++F+ E +V+ ++ H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C+E LV+ ++E+ L+ L F+ T +C+ + G+A
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMA 117
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L E +IHRD+ A N L+ ++ K+SDFG+ + + + ST + + +PE
Sbjct: 118 YLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 174
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E+ S
Sbjct: 175 VFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 137/296 (46%), Gaps = 42/296 (14%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRL-KDGKIAAIKVLSAESRQG-------VKEFLTEI 91
++A ++ +IG+GGFG V+KGRL KD + AIK L +G +EF E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
++S + H N+VKLYG N +V ++ L L+ H W + R+
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRL 127
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILL-----DKDLTPKISDFGLAKLIPANMTHV 206
+ IA G+ ++ + P I+HRD+++ NI L + + K++DF L++ H
Sbjct: 128 MLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHS 182
Query: 207 STRVAGTIGYLAPEY--AIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLER 264
+ + G ++APE A T KAD YSF ++L I++G P +E
Sbjct: 183 VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG------PFDEYS---- 232
Query: 265 TWDLYERRELILLV-DTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
Y + + I ++ + L + R V LC PK RP S +V+ L
Sbjct: 233 ----YGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 49 INKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
+ ++G G FG V+ G + A+K L + V+ FL E ++ ++H+ LV+LY
Sbjct: 18 VKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAV 76
Query: 109 CVEGNHRILVYNYLENNSLAQTLIG--GGHHY--SNIQFSWRTRSRICIGIARGLAFLHE 164
++ Y+ SL L GG I FS IA G+A++
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS--------AQIAEGMAYIE- 127
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
R + IHRD++A+N+L+ + L KI+DFGLA++I N I + APE
Sbjct: 128 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 185
Query: 225 GQVTRKADIYSFGVLLVEIVS-------GRCNTNMRLPTEEQYLLER 264
G T K+D++SFG+LL EIV+ GR N ++ + Y + R
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPR 232
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 106/205 (51%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I + + + +IG G FG V+ G + AIK + E ++F+ E +V+ ++ H
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C+E LV ++E+ L+ L F+ T +C+ + G+A
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-----RTQRGLFAAETLLGMCLDVCEGMA 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L E +IHRD+ A N L+ ++ K+SDFG+ + + + ST + + +PE
Sbjct: 119 YLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPE 175
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E+ S
Sbjct: 176 VFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 49 INKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
+ ++G G G V+ G A+K L S FL E ++ +++H+ LV+LY
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAV 76
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRP 168
+ I+ Y+EN SL L S I+ + + IA G+AF+ E
Sbjct: 77 VTQEPIYIIT-EYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEGMAFIEER--- 128
Query: 169 HIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVT 228
+ IHRD++A+NIL+ L+ KI+DFGLA+LI I + APE G T
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 229 RKADIYSFGVLLVEIVS 245
K+D++SFG+LL EIV+
Sbjct: 189 IKSDVWSFGILLTEIVT 205
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H S +F + I ARG+ +LH +
Sbjct: 78 TKPQLAI-VTQWCEGSSLYHHL-----HASETKFEMKKLIDIARQTARGMDYLHAK---S 128
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQVT 228
IIHRD+K++NI L +D T KI DFGLA + + +H +++G+I ++APE IR Q +
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDS 187
Query: 229 R----KADIYSFGVLLVEIVSGR---CNTNMR 253
++D+Y+FG++L E+++G+ N N R
Sbjct: 188 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 219
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 115/212 (54%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H S +F + I ARG+ +LH +
Sbjct: 90 TKPQLAI-VTQWCEGSSLYHHL-----HASETKFEMKKLIDIARQTARGMDYLHAK---S 140
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAPEYAIRGQVT 228
IIHRD+K++NI L +D T KI DFGLA + + +H +++G+I ++APE IR Q +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDS 199
Query: 229 R----KADIYSFGVLLVEIVSGR---CNTNMR 253
++D+Y+FG++L E+++G+ N N R
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 231
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 51 KIGEGGFGSVYKGRL------KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
++GEG FG V+ KD + A+K L + K+F E ++++ ++HE++VK
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 105 LYGCCVEGNHRILVYNYLENNSL----------AQTLIGGGHHYSNIQFSWRTRSRICIG 154
YG C +G+ I+V+ Y+++ L A L+ G + + I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTHVSTRVAGT 213
IA G+ +L + H +HRD+ N L+ +L KI DFG+++ + + V
Sbjct: 142 IASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I ++ PE + + T ++D++SFGV+L EI +
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+V + E +SL L H S +F + I ARG+ +LH +
Sbjct: 90 T-APQLAIVTQWCEGSSLYHHL-----HASETKFEMKKLIDIARQTARGMDYLHAK---S 140
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAPEYAIRGQVT 228
IIHRD+K++NI L +D T KI DFGLA + + +H +++G+I ++APE IR Q +
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDS 199
Query: 229 R----KADIYSFGVLLVEIVSGR---CNTNMR 253
++D+Y+FG++L E+++G+ N N R
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 231
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 112/227 (49%), Gaps = 23/227 (10%)
Query: 49 INKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
+ K+G G FG V+ G + A+K L + V+ FL E ++ ++H+ LV+LY
Sbjct: 17 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 109 CVEGNHRILVYNYLENNSLAQTLIG--GGHHY--SNIQFSWRTRSRICIGIARGLAFLHE 164
+ ++ ++ SL L GG I FS + IA G+A++
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ--------IAEGMAYIE- 126
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
R + IHRD++A+N+L+ + L KI+DFGLA++I N I + APE
Sbjct: 127 --RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF 184
Query: 225 GQVTRKADIYSFGVLLVEIVS-------GRCNTNMRLPTEEQYLLER 264
G T K++++SFG+LL EIV+ GR N ++ + Y + R
Sbjct: 185 GCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPR 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 17/209 (8%)
Query: 51 KIGEGGFGSVYKGRL------KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
++GEG FG V+ +D + A+K L S K+F E ++++ ++HE++VK
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGG-------HHYSNIQFSWRTRSRICIGIAR 157
YG CVEG+ I+V+ Y+++ L + L G + + I IA
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTHVSTRVAGTIGY 216
G+ +L + H +HRD+ N L+ ++L KI DFG+++ + + V I +
Sbjct: 140 GMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ PE + + T ++D++S GV+L EI +
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 101 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 151
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 210
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 79 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 188
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 79 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 188
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 74 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 183
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 76 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 126
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 185
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 102 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 211
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 52 IGEGGFGSVYKGRLK-DGK---IAAIKVLS-AESRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G FG V GRLK GK AIK L + + ++FL E ++ + +H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G G ++V ++EN +L L ++ IQ R GIA G+ +L +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR-----GIAAGMRYLADM- 164
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYAIR 224
+HRD+ A NIL++ +L K+SDFGL+++I + V T G I + APE
Sbjct: 165 --GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 225 GQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G+++ E++S
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 113/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
I V + E +SL L H +F I A+G+ +LH +
Sbjct: 74 TAPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 183
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYT-SQIC----KGMEY 132
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 24/228 (10%)
Query: 27 GIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESR 81
G HN+ + + L + ++G+G FGSV R L+D G++ A+K L +
Sbjct: 18 GSHNMTQFEERHLKF-------LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 70
Query: 82 QGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYS 139
+ +++F EI+++ ++H+N+VK G C R L+ YL SL L
Sbjct: 71 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 140 NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI 199
+I+ T S+IC +G+ +L + IHRD+ NIL++ + KI DFGL K++
Sbjct: 131 HIKLLQYT-SQIC----KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 200 PANMTHVSTRVAGT--IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
P + + G I + APE + + +D++SFGV+L E+ +
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 74 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 183
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 94 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 144
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 203
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 204 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 235
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 115/228 (50%), Gaps = 24/228 (10%)
Query: 27 GIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESR 81
G HN+ + + L + ++G+G FGSV R L+D G++ A+K L +
Sbjct: 18 GSHNMTQFEERHLKF-------LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 70
Query: 82 QGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYS 139
+ +++F EI+++ ++H+N+VK G C R L+ YL SL L
Sbjct: 71 EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID 130
Query: 140 NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI 199
+I+ T S+IC +G+ +L + IHRD+ NIL++ + KI DFGL K++
Sbjct: 131 HIKLLQYT-SQIC----KGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVL 182
Query: 200 PANMTHVSTRVAGT--IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
P + + G I + APE + + +D++SFGV+L E+ +
Sbjct: 183 PQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 114/212 (53%), Gaps = 18/212 (8%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ + ++A + Q ++ F E+ V+ + H N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ I V + E +SL L H +F I A+G+ +LH +
Sbjct: 102 TKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L +DLT KI DFGLA + + +H +++G+I ++APE IR Q
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE-VIRMQDK 211
Query: 227 --VTRKADIYSFGVLLVEIVSGR---CNTNMR 253
+ ++D+Y+FG++L E+++G+ N N R
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 36 YKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVIS 95
Y I D + + ++G G FG V G+ + AIK++ E EF+ E +V+
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMM 74
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+ HE LV+LYG C + ++ Y+ N L L H + Q +C +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDV 129
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+ +L + +HRD+ A N L++ K+SDFGL++ + + S +
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVR 186
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ PE + + + K+DI++FGVL+ EI S
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGLA+++ + T G I + +PE
Sbjct: 166 M---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGK---IAAIKVL-SAESRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G FG V +GRLK GK AIK L + + +EFL+E ++ + EH N+++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G +++ ++EN +L L ++ IQ R GIA G+ +L E
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLAEM- 135
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH--VSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++ + N + ++ + G I + APE
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D +S+G+++ E++S
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMS 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 108/203 (53%), Gaps = 18/203 (8%)
Query: 52 IGEGGFGSVYKGRLK--DGK---IAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENLVK 104
IG G FG VYKG LK GK AIK L A +Q V +FL E ++ + H N+++
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV-DFLGEAGIMGQFSHHNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + +++ Y+EN +L + L +S +Q R GIA G+ +L
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR-----GIAAGMKYL-- 163
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+ +HRD+ A NIL++ +L K+SDFGL++++ + T G I + APE
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++SFG+++ E+++
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMT 245
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 78
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 79 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 133
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 134 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 190
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 191 ESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 36 YKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVIS 95
Y I D + + ++G G FG V G+ + AIK++ E EF+ E +V+
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMM 74
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+ HE LV+LYG C + ++ Y+ N L L H + Q +C +
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDV 129
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+ +L + +HRD+ A N L++ K+SDFGL++ + + S +
Sbjct: 130 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ PE + + + K+DI++FGVL+ EI S
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGK---IAAIKVLSAE-SRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G FG V +GRLK GK AIK L + + +EFL+E ++ + EH N+++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G +++ ++EN +L L ++ IQ R GIA G+ +L E
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLAEM- 137
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV--STRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++ + N + ++ + G I + APE
Sbjct: 138 --SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D +S+G+++ E++S
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 34/277 (12%)
Query: 52 IGEGGFGSVYKGRLK-DGK------IAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
IG G FG V GRLK GK I +KV E ++ ++FL E ++ + +H N++
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIH 87
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GI+ G+ +L +
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR-----GISAGMKYLSD 142
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + APE
Sbjct: 143 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 223 IRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSL 282
+ T +D++S+G+++ E+VS Y W++ +++I V+
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVS--------------YGERPYWEM-TNQDVIKAVEEGY 244
Query: 283 NGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
+ ++ L C Q RP +V ML
Sbjct: 245 RLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 9/210 (4%)
Query: 36 YKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVIS 95
Y I D + + ++G G FG V G+ + AIK++ E EF+ E +V+
Sbjct: 7 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMM 65
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+ HE LV+LYG C + ++ Y+ N L L H + Q +C +
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDV 120
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+ +L + +HRD+ A N L++ K+SDFGL++ + + S +
Sbjct: 121 CEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 177
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ PE + + + K+DI++FGVL+ EI S
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 73
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 74 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 128
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 129 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 185
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 186 ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 79
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 80 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 134
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 135 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 191
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 192 ESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 129
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 129
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 72
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 73 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 127
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 128 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 184
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 185 ESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 105
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 106 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 160
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 161 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 217
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 218 ESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 74
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 75 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 129
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 130 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 186
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 80
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 81 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 135
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 136 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 192
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 193 ESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 81
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 82 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 136
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 137 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 193
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 194 ESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 132
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 166 M---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 120/243 (49%), Gaps = 49/243 (20%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQV--IS 95
E S+ D+ + IG G +G+VYKG L D + A+KV S +RQ F+ E + +
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVP 62
Query: 96 EIEHENLVKLYGCCVEGNHRI---------LVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+EH+N+ + + G+ R+ LV Y N SL + L H S+ W
Sbjct: 63 LMEHDNIARF----IVGDERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSD----WV 111
Query: 147 TRSRICIGIARGLAFLHEEV------RPHIIHRDIKASNILLDKDLTPKISDFGLA---- 196
+ R+ + RGLA+LH E+ +P I HRD+ + N+L+ D T ISDFGL+
Sbjct: 112 SSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLT 171
Query: 197 --KLI-PANMTHVSTRVAGTIGYLAPEYAIRGQVT--------RKADIYSFGVLLVEIVS 245
+L+ P + + GTI Y+APE + G V ++ D+Y+ G++ EI
Sbjct: 172 GNRLVRPGEEDNAAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
Query: 246 GRC 248
RC
Sbjct: 231 -RC 232
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 52 IGEGGFGSVYKGRLK-DGK---IAAIKVLSAE-SRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G FG V GRLK GK AIK L A + + ++FL+E ++ + +H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G + +++ Y+EN SL L ++ IQ R GI G+ +L +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDM- 150
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYAIR 224
+HRD+ A NIL++ +L K+SDFG+++++ + T G I + APE
Sbjct: 151 --SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 225 GQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G+++ E++S
Sbjct: 209 RKFTSASDVWSYGIVMWEVMS 229
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I D + + ++G G FG V G+ + AIK++ E EF+ E +V+ + HE
Sbjct: 5 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 63
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C + ++ Y+ N L L H + Q +C + +
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L + +HRD+ A N L++ K+SDFGL++ + + S + + PE
Sbjct: 119 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 175
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + + K+DI++FGVL+ EI S
Sbjct: 176 VLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I D + + ++G G FG V G+ + AIK++ E EF+ E +V+ + HE
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 59
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C + ++ Y+ N L L H + Q +C + +
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 114
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L + +HRD+ A N L++ K+SDFGL++ + + S + + PE
Sbjct: 115 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 171
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + + K+DI++FGVL+ EI S
Sbjct: 172 VLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 27/209 (12%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSAES----RQGVKEFLTEIQVISEIEHENLVKLYG 107
IG GGFG VY+ G A+K + Q ++ E ++ + ++H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 108 CCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVR 167
C++ + LV + L + L G +I +W + IARG+ +LH+E
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVL-SGKRIPPDILVNW------AVQIARGMNYLHDEAI 126
Query: 168 PHIIHRDIKASNILL-----DKDLTP---KISDFGLAKLIPANMTHVSTRV--AGTIGYL 217
IIHRD+K+SNIL+ + DL+ KI+DFGLA+ H +T++ AG ++
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWM 181
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE ++ +D++S+GVLL E+++G
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I D + + ++G G FG V G+ + AIK++ E EF+ E +V+ + HE
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C + ++ Y+ N L L H + Q +C + +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L + +HRD+ A N L++ K+SDFGL++ + + S + + PE
Sbjct: 120 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPE 176
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + + K+DI++FGVL+ EI S
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 166 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 77
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ +L SL + L +I+ T S+IC +G+ +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYT-SQIC----KGMEY 132
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHRD+ NIL++ + KI DFGL K++P + + G I + AP
Sbjct: 133 LGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 190 ESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 98
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 153
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 154 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMS 233
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 109/206 (52%), Gaps = 17/206 (8%)
Query: 49 INKIGEGGFGSVYKGR---LKD--GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+ ++G+G FGSV R L+D G++ A+K L + + +++F EI+++ ++H+N+V
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIV 75
Query: 104 KLYGCCVEGNHR--ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
K G C R L+ YL SL L +I+ T S+IC +G+ +
Sbjct: 76 KYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT-SQIC----KGMEY 130
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAP 219
L + IHR++ NIL++ + KI DFGL K++P + + + G I + AP
Sbjct: 131 LGTK---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E + + +D++SFGV+L E+ +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 166 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 166 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 108
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 163
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 164 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 166 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 81
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 136
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 137 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 9/205 (4%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
I D + + ++G G FG V G+ + AIK++ E EF+ E +V+ + HE
Sbjct: 6 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
LV+LYG C + ++ Y+ N L L H + Q +C + +
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAME 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L + +HRD+ A N L++ K+SDFGL++ + + S + + PE
Sbjct: 120 YLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPE 176
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVS 245
+ + + K+DI++FGVL+ EI S
Sbjct: 177 VLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 52 IGEGGFGSVYKGRLK-DGK---IAAIKVLSAE-SRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G FG V GRLK GK AIK L A + + ++FL+E ++ + +H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G + +++ Y+EN SL L ++ IQ R GI G+ +L +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDM- 129
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYAIR 224
+HRD+ A NIL++ +L K+SDFG+++++ + T G I + APE
Sbjct: 130 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 225 GQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G+++ E++S
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS 208
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 106/201 (52%), Gaps = 15/201 (7%)
Query: 52 IGEGGFGSVYKGRLK-DGK---IAAIKVLSAE-SRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G FG V GRLK GK AIK L A + + ++FL+E ++ + +H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G + +++ Y+EN SL L ++ IQ R GI G+ +L +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR-----GIGSGMKYLSDM- 135
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYAIR 224
+HRD+ A NIL++ +L K+SDFG+++++ + T G I + APE
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 225 GQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G+++ E++S
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V Y+EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL +++ + T G I + +PE
Sbjct: 166 M---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 51 KIGEGGFGSVYKGRL------KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
++GEG FG V+ +D + A+K L S ++F E ++++ ++H+++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQ---------TLIGGGHHYSNIQFSWRTRSRICIGI 155
+G C EG ++V+ Y+ + L + L+ GG + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTHVSTRVAGTI 214
A G+ +L H +HRD+ N L+ + L KI DFG+++ + + V R I
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 215 GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
++ PE + + T ++D++SFGV+L EI +
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 51 KIGEGGFGSVYKGRL------KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
++GEG FG V+ +D + A+K L S ++F E ++++ ++H+++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQ---------TLIGGGHHYSNIQFSWRTRSRICIGI 155
+G C EG ++V+ Y+ + L + L+ GG + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTHVSTRVAGTI 214
A G+ +L H +HRD+ N L+ + L KI DFG+++ + + V R I
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 215 GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
++ PE + + T ++D++SFGV+L EI +
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G G FG V+ A+K + S V+ FL E V+ ++H+ LVKL+
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 111 EGNHRILVYNYLENNSLAQTLI---GGGHHYSN-IQFSWRTRSRICIGIARGLAFLHEEV 166
+ I+ ++ SL L G I FS IA G+AF+ +
Sbjct: 81 KEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFS--------AQIAEGMAFIEQR- 130
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ 226
+ IHRD++A+NIL+ L KI+DFGLA++I N I + APE G
Sbjct: 131 --NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 227 VTRKADIYSFGVLLVEIVS 245
T K+D++SFG+LL+EIV+
Sbjct: 189 FTIKSDVWSFGILLMEIVT 207
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 104/211 (49%), Gaps = 19/211 (9%)
Query: 51 KIGEGGFGSVYKGRL------KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
++GEG FG V+ +D + A+K L S ++F E ++++ ++H+++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQ---------TLIGGGHHYSNIQFSWRTRSRICIGI 155
+G C EG ++V+ Y+ + L + L+ GG + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTHVSTRVAGTI 214
A G+ +L H +HRD+ N L+ + L KI DFG+++ + + V R I
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 215 GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
++ PE + + T ++D++SFGV+L EI +
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 45/293 (15%)
Query: 49 INKIGEGGFGSVY-----KGRLKDGKIAAIKVLSA----ESRQGVKEFLTEIQVISEIEH 99
I +GEG FG V G++ A+K L A + R G K+ EI ++ + H
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYH 75
Query: 100 ENLVKLYGCCVEGNHRIL--VYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
E+++K GCC + + L V Y+ SL L H + +IC
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQIC----E 128
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIG 215
G+A+LH + H IHR++ A N+LLD D KI DFGLAK +P + R G +
Sbjct: 129 GMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT---------EEQYLLERTW 266
+ APE + +D++SFGV L E+++ C+++ PT + Q + R
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLT 244
Query: 267 DLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
+L ER E + D C + C + RP+ ++ +L
Sbjct: 245 ELLERGERLPRPDKC---------PCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 17/203 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGK---IAAIKVL-SAESRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G FG V G LK GK AIK L S + + ++FL+E ++ + +H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G + +++ ++EN SL L ++ IQ R GIA G+ +L +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYLADM- 154
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH--VSTRVAGTIG--YLAPEYA 222
+ +HRD+ A NIL++ +L K+SDFGL++ + + + ++ + G I + APE
Sbjct: 155 --NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G+++ E++S
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMS 235
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
KIGEG G V ++ GK+ A+K + +Q + E+ ++ + +HEN+V++Y
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ G+ +V +LE +L + ++ + + + +C+ + + L+ LH +
Sbjct: 96 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQ---G 145
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTR 229
+IHRDIK+ +ILL D K+SDFG + + + GT ++APE R
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGP 204
Query: 230 KADIYSFGVLLVEIVSG 246
+ DI+S G++++E+V G
Sbjct: 205 EVDIWSLGIMVIEMVDG 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
KIGEG G V ++ GK+ A+K + +Q + E+ ++ + +HEN+V++Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ G+ +V +LE +L + ++ + + + +C+ + + L+ LH +
Sbjct: 87 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQ---G 136
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTR 229
+IHRDIK+ +ILL D K+SDFG + + + GT ++APE R
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGP 195
Query: 230 KADIYSFGVLLVEIVSG 246
+ DI+S G++++E+V G
Sbjct: 196 EVDIWSLGIMVIEMVDG 212
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 129/293 (44%), Gaps = 45/293 (15%)
Query: 49 INKIGEGGFGSVY-----KGRLKDGKIAAIKVLSA----ESRQGVKEFLTEIQVISEIEH 99
I +GEG FG V G++ A+K L A + R G K+ EI ++ + H
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYH 75
Query: 100 ENLVKLYGCCVEGNHRIL--VYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
E+++K GCC + + L V Y+ SL L H + +IC
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQIC----E 128
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIG 215
G+A+LH + H IHR++ A N+LLD D KI DFGLAK +P + R G +
Sbjct: 129 GMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 185
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT---------EEQYLLERTW 266
+ APE + +D++SFGV L E+++ C+++ PT + Q + R
Sbjct: 186 WYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLT 244
Query: 267 DLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
+L ER E + D C + C + RP+ ++ +L
Sbjct: 245 ELLERGERLPRPDKC---------PCEVYHLMKNCWETEASFRPTFENLIPIL 288
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 98/199 (49%), Gaps = 17/199 (8%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
K+G G FG V+ A+K + S V+ FL E V+ ++H+ LVKL+
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 111 EGNHRILVYNYLENNSLAQTLI---GGGHHYSN-IQFSWRTRSRICIGIARGLAFLHEEV 166
+ I+ ++ SL L G I FS IA G+AF+ +
Sbjct: 254 KEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFS--------AQIAEGMAFIEQR- 303
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ 226
+ IHRD++A+NIL+ L KI+DFGLA++I N I + APE G
Sbjct: 304 --NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 227 VTRKADIYSFGVLLVEIVS 245
T K+D++SFG+LL+EIV+
Sbjct: 362 FTIKSDVWSFGILLMEIVT 380
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
KIGEG G V ++ GK+ A+K + +Q + E+ ++ + +HEN+V++Y
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ G+ +V +LE +L + ++ + + + +C+ + + L+ LH +
Sbjct: 91 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQ---G 140
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTR 229
+IHRDIK+ +ILL D K+SDFG + + + GT ++APE R
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGP 199
Query: 230 KADIYSFGVLLVEIVSG 246
+ DI+S G++++E+V G
Sbjct: 200 EVDIWSLGIMVIEMVDG 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
KIGEG G V ++ GK+ A+K + +Q + E+ ++ + +HEN+V++Y
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ G+ +V +LE +L + ++ + + + +C+ + + L+ LH +
Sbjct: 98 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQ---G 147
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTR 229
+IHRDIK+ +ILL D K+SDFG + + + GT ++APE R
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGP 206
Query: 230 KADIYSFGVLLVEIVSG 246
+ DI+S G++++E+V G
Sbjct: 207 EVDIWSLGIMVIEMVDG 223
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 12/197 (6%)
Query: 51 KIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
KIGEG G V R K G+ A+K++ +Q + E+ ++ + +H N+V++Y
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ G ++ +L+ +L + S ++ + + +C + + LA+LH +
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV-------SQVRLNEEQIATVCEAVLQALAYLHAQ---G 161
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTR 229
+IHRDIK+ +ILL D K+SDFG I ++ + GT ++APE R
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYAT 220
Query: 230 KADIYSFGVLLVEIVSG 246
+ DI+S G++++E+V G
Sbjct: 221 EVDIWSLGIMVIEMVDG 237
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
KIGEG G V ++ GK+ A+K + +Q + E+ ++ + +HEN+V++Y
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ G+ +V +LE +L + ++ + + + +C+ + + L+ LH +
Sbjct: 141 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQ---G 190
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTR 229
+IHRDIK+ +ILL D K+SDFG + + + GT ++APE R
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGP 249
Query: 230 KADIYSFGVLLVEIVSG 246
+ DI+S G++++E+V G
Sbjct: 250 EVDIWSLGIMVIEMVDG 266
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 12/197 (6%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
KIGEG G V ++ GK+ A+K + +Q + E+ ++ + +HEN+V++Y
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ G+ +V +LE +L + ++ + + + +C+ + + L+ LH +
Sbjct: 218 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIAAVCLAVLQALSVLHAQ---G 267
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTR 229
+IHRDIK+ +ILL D K+SDFG + + V GT ++APE R
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGP 326
Query: 230 KADIYSFGVLLVEIVSG 246
+ DI+S G++++E+V G
Sbjct: 327 EVDIWSLGIMVIEMVDG 343
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 107/222 (48%), Gaps = 27/222 (12%)
Query: 49 INKIGEGGFGSVY-----KGRLKDGKIAAIKVLSAES----RQGVKEFLTEIQVISEIEH 99
I +GEG FG V G++ A+K L A++ R G K+ EI ++ + H
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYH 92
Query: 100 ENLVKLYGCCVEGNHRIL--VYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
E+++K GCC + L V Y+ SL L H + +IC
Sbjct: 93 EHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQIC----E 145
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIG 215
G+A+LH + H IHRD+ A N+LLD D KI DFGLAK +P R G +
Sbjct: 146 GMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF 202
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTE 257
+ APE + +D++SFGV L E+++ C+++ PT+
Sbjct: 203 WYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTK 243
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
D + +K+G G FG VY+G K + A+K L ++ + V+EFL E V+ EI+H NLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
+L G C ++ ++ +L L + + S + I+ + +L
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
+ + IHRD+ A N L+ ++ K++DFGL++L+ + I + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 224 RGQVTRKADIYSFGVLLVEIVS-GRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSL 282
+ + K+D+++FGVLL EI + G P++ LLE+ + +
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM-------------- 229
Query: 283 NGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDIDDD 328
+ E C + ++ C Q P RPS + + Q + E I D+
Sbjct: 230 ----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 114/216 (52%), Gaps = 22/216 (10%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKE-FLTEIQVISEIEH 99
++ F + K+G G + +VYKG K G A+K + +S +G + EI ++ E++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENN---SLAQTLIGG---GHHYSNIQ-FSWRTRSRIC 152
EN+V+LY N LV+ +++N+ + +G G + ++ F W+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ------ 116
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+ +GLAF HE I+HRD+K N+L++K K+ DFGLA+ + S+ V
Sbjct: 117 --LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV- 170
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ Y AP+ + + + DI+S G +L E+++G+
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 108/212 (50%), Gaps = 15/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVY--KGRLKDGKIA--AIKVLSAESRQGVKEFLTEIQVISE 96
I + + ++K+G GG +VY + + + K+A AI + E + +K F E+ S+
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQ 67
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+ H+N+V + E + LV Y+E +L++ + G S T I
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQIL 121
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
G+ H+ I+HRDIK NIL+D + T KI DFG+AK + + V GT+ Y
Sbjct: 122 DGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 217 LAPEYAIRGQVTRK-ADIYSFGVLLVEIVSGR 247
+PE A +G+ T + DIYS G++L E++ G
Sbjct: 179 FSPEQA-KGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA----VVLLYMAT 119
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 120 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 176
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 224
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 225 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 277
Query: 327 DD 328
D+
Sbjct: 278 DE 279
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V +EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 166 M---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L + + S +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMAT 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 223
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 224 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
Query: 327 DD 328
D+
Sbjct: 277 DE 278
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 109/202 (53%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+IG G FG+VYKG+ D + +KV+ Q + F E+ V+ + H N++ G
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFMGYM 101
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ N I V + E +SL + L H +F I A+G+ +LH + +
Sbjct: 102 TKDNLAI-VTQWCEGSSLYKHL-----HVQETKFQMFQLIDIARQTAQGMDYLHAK---N 152
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAPEYAIRGQ-- 226
IIHRD+K++NI L + LT KI DFGLA + + + + G++ ++APE IR Q
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPE-VIRMQDN 211
Query: 227 --VTRKADIYSFGVLLVEIVSG 246
+ ++D+YS+G++L E+++G
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTG 233
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L + + S +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMAT 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 223
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 224 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
Query: 327 DD 328
D+
Sbjct: 277 DE 278
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L + + S +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMAT 123
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 228
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 229 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 281
Query: 327 DD 328
D+
Sbjct: 282 DE 283
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 123
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFP 180
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE + + K+D+++FGVLL EI +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L + + S +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMAT 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 223
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 224 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
Query: 327 DD 328
D+
Sbjct: 277 DE 278
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLYMAT 119
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 120 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 176
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 177 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 224
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 225 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 277
Query: 327 DD 328
D+
Sbjct: 278 DE 279
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 81
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V +EN SL L ++ IQ R GIA G+ +L +
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 136
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 137 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 137/302 (45%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L + + S +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMAT 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 223
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 224 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 276
Query: 327 DD 328
D+
Sbjct: 277 DE 278
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 104/203 (51%), Gaps = 19/203 (9%)
Query: 52 IGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+G G FG V GRLK I +KV E ++ ++FL E ++ + +H N+++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR--RDFLGEASIMGQFDHPNIIR 110
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
L G + ++V +EN SL L ++ IQ R GIA G+ +L +
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLR-----GIASGMKYLSD 165
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYA 222
+HRD+ A NIL++ +L K+SDFGL++++ + T G I + +PE
Sbjct: 166 M---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G++L E++S
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 120
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 121 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFP 177
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 225
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 226 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 278
Query: 327 DD 328
D+
Sbjct: 279 DE 280
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 52 IGEGGFGSVYKGRLK-----DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G G V GRL+ D +A + + + + ++FL+E ++ + +H N+++L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G G ++V Y+EN SL L ++ +Q R G+ G+ +L +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR-----GVGAGMRYLSDL- 170
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYAIR 224
+HRD+ A N+L+D +L K+SDFGL++++ + T G I + APE
Sbjct: 171 --GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAF 228
Query: 225 GQVTRKADIYSFGVLLVEIVS 245
+ +D++SFGV++ E+++
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 123
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE + + K+D+++FGVLL EI +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 75
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLYMAT 131
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 132 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 188
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 189 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 236
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 237 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 289
Query: 327 DD 328
D+
Sbjct: 290 DE 291
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 66
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 122
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 123 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 179
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE + + K+D+++FGVLL EI +
Sbjct: 180 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 120
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 121 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 225
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 226 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 278
Query: 327 DD 328
D+
Sbjct: 279 DE 280
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE + + K+D+++FGVLL EI +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 123
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE + + K+D+++FGVLL EI +
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 9/220 (4%)
Query: 27 GIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVK 85
G N+ S + + D + +K+G G +G VY G K + A+K L ++ + V+
Sbjct: 15 GTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VE 73
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSW 145
EFL E V+ EI+H NLV+L G C +V Y+ +L L + + +
Sbjct: 74 EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL----RECNREEVTA 129
Query: 146 RTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH 205
+ I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 130 VVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT 186
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE + K+D+++FGVLL EI +
Sbjct: 187 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 29/223 (13%)
Query: 49 INKIGEGGFGSVYKGR------LKDGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHEN 101
+ IGEG FG V++ R + + A+K+L E+ ++ +F E +++E ++ N
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHH----YSNIQFSWRTR--------- 148
+VKL G C G L++ Y+ L + L H S+ S R R
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 149 ---SRICIG--IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PAN 202
++CI +A G+A+L E +HRD+ N L+ +++ KI+DFGL++ I A+
Sbjct: 172 SCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD 228
Query: 203 MTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
A I ++ PE + T ++D++++GV+L EI S
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V+ EI+H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
+L G C ++ ++ +L L + + S + I+ + +L
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
+ + IHRD+ A N L+ ++ K++DFGL++L+ + I + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLA 183
Query: 224 RGQVTRKADIYSFGVLLVEIVS-GRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSL 282
+ + K+D+++FGVLL EI + G P++ LLE+ + +
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM-------------- 229
Query: 283 NGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDIDDD 328
+ E C + ++ C Q P RPS + + Q + E I D+
Sbjct: 230 ----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA----VVLLYMAT 123
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 124 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 180
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 181 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 228
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 229 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 281
Query: 327 DD 328
D+
Sbjct: 282 DE 283
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 35/302 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 120
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 121 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 177
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
I + APE + + K+D+++FGVLL EI + + + DL + E
Sbjct: 178 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI------------DLSQVYE 225
Query: 274 LILLVDTSLNGDFDAE--EAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDID 326
L L D+ E E C + ++ C Q P RPS + + Q + E I
Sbjct: 226 L-------LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSIS 278
Query: 327 DD 328
D+
Sbjct: 279 DE 280
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHRD+ A N L+ ++ K++DFGL++L+ +
Sbjct: 119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 175
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + APE + + K+D+++FGVLL EI +
Sbjct: 176 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 35/277 (12%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHENLV 103
F+ + +IG+G FG V+KG + ++ AIK++ E+ +++ EI V+S+ + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
K YG ++G+ ++ YL S L G + Q + + I +GL +LH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKE-----ILKGLDYLH 137
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
E + IHRDIKA+N+LL + K++DFG+A + +T V GT ++APE
Sbjct: 138 SEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQ 193
Query: 224 RGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDT--- 280
+ KADI+S G+ +E+ G + D++ R L L+
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGEPPNS---------------DMHPMRVLFLIPKNNPP 238
Query: 281 SLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQ 317
+L GDF + F+ C P RP+ +++
Sbjct: 239 TLVGDF-TKSFKEFIDA---CLNKDPSFRPTAKELLK 271
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 116/238 (48%), Gaps = 24/238 (10%)
Query: 11 RDSPRNRVPEVDEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD-GK 69
R+ PR ++ ++DE+ L E + F + K+GEG +GSVYK K+ G+
Sbjct: 8 RNPPRRQLKKLDED-------SLTKQPE-----EVFDVLEKLGEGSYGSVYKAIHKETGQ 55
Query: 70 IAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQ 129
I AIK + ES ++E + EI ++ + + ++VK YG + +V Y S++
Sbjct: 56 IVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSD 113
Query: 130 TLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPK 189
+ N + + I +GL +LH + IHRDIKA NILL+ + K
Sbjct: 114 II-----RLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAK 165
Query: 190 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
++DFG+A + M V GT ++APE ADI+S G+ +E+ G+
Sbjct: 166 LADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 103/201 (51%), Gaps = 15/201 (7%)
Query: 52 IGEGGFGSVYKGRLK-----DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G G V GRL+ D +A + + + + ++FL+E ++ + +H N+++L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G G ++V Y+EN SL L ++ +Q R G+ G+ +L +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR-----GVGAGMRYLSDL- 170
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG--YLAPEYAIR 224
+HRD+ A N+L+D +L K+SDFGL++++ + T G I + APE
Sbjct: 171 --GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAF 228
Query: 225 GQVTRKADIYSFGVLLVEIVS 245
+ +D++SFGV++ E+++
Sbjct: 229 RTFSSASDVWSFGVVMWEVLA 249
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTE 90
KL S + ++ KIG+G G+VY + G+ AI+ ++ + + + + E
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
I V+ E ++ N+V + G+ +V YL SL + I +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-------AA 120
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
+C + L FLH +IHRDIK+ NILL D + K++DFG I + ST V
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
GT ++APE R K DI+S G++ +E++ G
Sbjct: 178 -GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V+ EI+H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
+L G C ++ ++ +L L + + S + I+ + +L
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMATQISSAMEYLE 126
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
+ + IHRD+ A N L+ ++ K++DFGL++L+ + I + APE
Sbjct: 127 ---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLA 183
Query: 224 RGQVTRKADIYSFGVLLVEIVS-GRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSL 282
+ + K+D+++FGVLL EI + G P++ LLE+ + +
Sbjct: 184 YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM-------------- 229
Query: 283 NGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDIDDD 328
+ E C + ++ C Q P RPS + + Q + E I D+
Sbjct: 230 ----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDE 276
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 27 GIHNVKLYSYKELSIATDDFSP------INKIGEGGFGSVYKGRLKDGKI-AAIKVLSAE 79
G N+ S K+ T D +P I ++G+G FG VYK + K+ + AA KV+ +
Sbjct: 14 GTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK 73
Query: 80 SRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYS 139
S + +++++ EI +++ +H N+VKL N+ ++ + ++ ++ +
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT 133
Query: 140 NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI 199
Q +C L +LH+ IIHRD+KA NIL D K++DFG++
Sbjct: 134 ESQI-----QVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-- 183
Query: 200 PANMTHVSTR--VAGTIGYLAPEYAIRGQVTR------KADIYSFGVLLVEIV 244
N + R GT ++APE + + ++ KAD++S G+ L+E+
Sbjct: 184 -KNTRXIQRRDXFIGTPYWMAPE-VVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 27/233 (11%)
Query: 27 GIHNVKLYSYKELSIATDDFSP------INKIGEGGFGSVYKGRLKDGKI-AAIKVLSAE 79
G N+ S K+ T D +P I ++G+G FG VYK + K+ + AA KV+ +
Sbjct: 14 GTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK 73
Query: 80 SRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYS 139
S + +++++ EI +++ +H N+VKL N+ ++ + ++ ++ +
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT 133
Query: 140 NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI 199
Q +C L +LH+ IIHRD+KA NIL D K++DFG++
Sbjct: 134 ESQI-----QVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-- 183
Query: 200 PANMTHVSTRVA--GTIGYLAPEYAIRGQVTR------KADIYSFGVLLVEIV 244
N + R + GT ++APE + + ++ KAD++S G+ L+E+
Sbjct: 184 -KNTRXIQRRDSFIGTPYWMAPE-VVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 115/233 (49%), Gaps = 27/233 (11%)
Query: 27 GIHNVKLYSYKELSIATDDFSP------INKIGEGGFGSVYKGRLKDGKI-AAIKVLSAE 79
G N+ S K+ T D +P I ++G+G FG VYK + K+ + AA KV+ +
Sbjct: 14 GTENLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK 73
Query: 80 SRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYS 139
S + +++++ EI +++ +H N+VKL N+ ++ + ++ ++ +
Sbjct: 74 SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT 133
Query: 140 NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI 199
Q +C L +LH+ IIHRD+KA NIL D K++DFG++
Sbjct: 134 ESQI-----QVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-- 183
Query: 200 PANMTHVSTRVA--GTIGYLAPEYAIRGQVTR------KADIYSFGVLLVEIV 244
N + R + GT ++APE + + ++ KAD++S G+ L+E+
Sbjct: 184 -KNTRTIQRRDSFIGTPYWMAPE-VVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 107/206 (51%), Gaps = 17/206 (8%)
Query: 45 DFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISEIEHE 100
DF + +G G FG V+ R + +G+ A+KVL E + V+ E ++S + H
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHP 66
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
+++++G + ++ +Y+E L +L+ + N + + +C+ L
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELF-SLLRKSQRFPNPVAKFYA-AEVCLA----LE 120
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+LH + II+RD+K NILLDK+ KI+DFG AK +P V+ + GT Y+APE
Sbjct: 121 YLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGTPDYIAPE 173
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSG 246
+ D +SFG+L+ E+++G
Sbjct: 174 VVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 108/203 (53%), Gaps = 17/203 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGK---IAAIKVL-SAESRQGVKEFLTEIQVISEIEHENLVKLY 106
IG G FG V G LK GK AIK L S + + ++FL+E ++ + +H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
G + +++ ++EN SL L ++ IQ R GIA G+ +L +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR-----GIAAGMKYLADM- 128
Query: 167 RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH--VSTRVAGTIG--YLAPEYA 222
+ +HR + A NIL++ +L K+SDFGL++ + + + ++ + G I + APE
Sbjct: 129 --NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ T +D++S+G+++ E++S
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMS 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 12/197 (6%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
KIGEG G V K GK A+K + +Q + E+ ++ + H+N+V +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ G+ +V +LE +L + ++ + + + +C+ + R L++LH +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIV-------THTRMNEEQIATVCLSVLRALSYLHNQ---G 161
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTR 229
+IHRDIK+ +ILL D K+SDFG + + + GT ++APE R
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKXLVGTPYWMAPEVISRLPYGT 220
Query: 230 KADIYSFGVLLVEIVSG 246
+ DI+S G++++E++ G
Sbjct: 221 EVDIWSLGIMVIEMIDG 237
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 15/206 (7%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKV------LSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+GEG FGSV +G LK ++KV L S++ ++EFL+E + + H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 106 YGCCVEGNHR-----ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
G C+E + + +++ +++ L L+ +T + + IA G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYLAP 219
+L + +HRD+ A N +L D+T ++DFGL+K I + + R+A + ++A
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVS 245
E T K+D+++FGV + EI +
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 41/296 (13%)
Query: 49 INKIGEGGFGSVY-----KGRLKDGKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENL 102
I +GEG FG V G++ A+K L ++ + EI+++ + HE++
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 103 VKLYGCCVEGNHRI--LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR--- 157
VK GCC + + LV Y+ SL L R C+G+A+
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----------------PRHCVGLAQLLL 115
Query: 158 -------GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
G+A+LH + H IHR + A N+LLD D KI DFGLAK +P + R
Sbjct: 116 FAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 211 AG--TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDL 268
G + + APE + +D++SFGV L E+++ C++N T+ L+ T
Sbjct: 173 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT-YCDSNQSPHTKFTELIGHTQGQ 231
Query: 269 YERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKD 324
L L++ C + C + RP+ +V +L ++
Sbjct: 232 MTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 287
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 41/296 (13%)
Query: 49 INKIGEGGFGSVY-----KGRLKDGKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENL 102
I +GEG FG V G++ A+K L ++ + EI+++ + HE++
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 103 VKLYGCCVEGNHRI--LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR--- 157
VK GCC + + LV Y+ SL L R C+G+A+
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----------------PRHCVGLAQLLL 116
Query: 158 -------GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
G+A+LH + H IHR + A N+LLD D KI DFGLAK +P + R
Sbjct: 117 FAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 211 AG--TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDL 268
G + + APE + +D++SFGV L E+++ C++N T+ L+ T
Sbjct: 174 DGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT-YCDSNQSPHTKFTELIGHTQGQ 232
Query: 269 YERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKD 324
L L++ C + C + RP+ +V +L ++
Sbjct: 233 MTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQE 288
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 137/301 (45%), Gaps = 33/301 (10%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 269
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L + + S +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL----RECNRQEVSAVVLLYMAT 325
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHR++ A N L+ ++ K++DFGL++L+ +
Sbjct: 326 QISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 382
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY-LLERTWDLYERR 272
I + APE + + K+D+++FGVLL EI + + + + Y LLE+ + +
Sbjct: 383 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---- 438
Query: 273 ELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDIDD 327
+ E C + ++ C Q P RPS + + Q + E I D
Sbjct: 439 --------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 484
Query: 328 D 328
+
Sbjct: 485 E 485
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTE 90
KL S + ++ KIG+G G+VY + G+ AI+ ++ + + + + E
Sbjct: 9 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 68
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
I V+ E ++ N+V + G+ +V YL SL + I +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-------AA 121
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
+C + L FLH +IHRDIK+ NILL D + K++DFG I + S V
Sbjct: 122 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 178
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
GT ++APE R K DI+S G++ +E++ G
Sbjct: 179 -GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTE 90
KL S + ++ KIG+G G+VY + G+ AI+ ++ + + + + E
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
I V+ E ++ N+V + G+ +V YL SL + I +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-------AA 120
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
+C + L FLH +IHRDIK+ NILL D + K++DFG I + S V
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV 177
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
GT ++APE R K DI+S G++ +E++ G
Sbjct: 178 -GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 101/216 (46%), Gaps = 12/216 (5%)
Query: 32 KLYSYKELSIATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTE 90
KL S + ++ KIG+G G+VY + G+ AI+ ++ + + + + E
Sbjct: 8 KLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE 67
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
I V+ E ++ N+V + G+ +V YL SL + I +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-------AA 120
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
+C + L FLH +IHRDIK+ NILL D + K++DFG I + S V
Sbjct: 121 VCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV 177
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
GT ++APE R K DI+S G++ +E++ G
Sbjct: 178 -GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEG 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 46 FSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
++ KIG+G G+VY + G+ AI+ ++ + + + + EI V+ E ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
+ G+ +V YL SL + I + +C + L FLH
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-------AAVCRECLQALEFLHS 135
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
+IHR+IK+ NILL D + K++DFG I + ST V GT ++APE R
Sbjct: 136 N---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTR 191
Query: 225 GQVTRKADIYSFGVLLVEIVSG 246
K DI+S G++ +E++ G
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEG 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKEFLT-EIQVISEIEHENLV 103
F+ + KIG+G FG V+KG + K+ AIK++ E + E + EI V+S+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
K YG ++ ++ YL S L G + I + I I +GL +LH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-------ATILREILKGLDYLH 121
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
E + IHRDIKA+N+LL + K++DFG+A + +T V GT ++APE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 177
Query: 224 RGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLER 264
+ KADI+S G+ +E+ G + P + +L+ +
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 218
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 136/301 (45%), Gaps = 33/301 (10%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 308
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 364
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L ++ + IHR++ A N L+ ++ K++DFGL++L+ +
Sbjct: 365 QISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 421
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY-LLERTWDLYERR 272
I + APE + + K+D+++FGVLL EI + + + + Y LLE+ + +
Sbjct: 422 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---- 477
Query: 273 ELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDIDD 327
+ E C + ++ C Q P RPS + + Q + E I D
Sbjct: 478 --------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 523
Query: 328 D 328
+
Sbjct: 524 E 524
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 135/301 (44%), Gaps = 33/301 (10%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQV 93
+Y + + D + +K+G G +G VY+G K + A+K L ++ + V+EFL E V
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 266
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EI+H NLV+L G C ++ ++ +L L N +
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV----VLLYMAT 322
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I+ + +L + + IHR++ A N L+ ++ K++DFGL++L+ +
Sbjct: 323 QISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP 379
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY-LLERTWDLYERR 272
I + APE + + K+D+++FGVLL EI + + + + Y LLE+ + +
Sbjct: 380 IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---- 435
Query: 273 ELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ---MLMGEKDIDD 327
+ E C + ++ C Q P RPS + + Q + E I D
Sbjct: 436 --------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 481
Query: 328 D 328
+
Sbjct: 482 E 482
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKEFLT-EIQVISEIEHENLV 103
F+ + KIG+G FG V+KG + K+ AIK++ E + E + EI V+S+ + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
K YG ++ ++ YL S L G + I + I I +GL +LH
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-------ATILREILKGLDYLH 141
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
E + IHRDIKA+N+LL + K++DFG+A + +T V GT ++APE
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 197
Query: 224 RGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLER 264
+ KADI+S G+ +E+ G + P + +L+ +
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 238
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 33/294 (11%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRL--KDGKIAAIKVLSAESRQGVKEFLTEIQVISEI 97
SI DD+ IG G V K K+A ++ + + + E L EIQ +S+
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 70
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNS---LAQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+V Y V + LV L S + + ++ G H S + T + I
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV-LDESTIATILRE 129
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPA----NMTHVSTRV 210
+ GL +LH+ + IHRD+KA NILL +D + +I+DFG++ + V
Sbjct: 130 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 211 AGTIGYLAPEY--AIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDL 268
GT ++APE +RG KADI+SFG+ +E+ +G + + P + +L D
Sbjct: 187 VGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYH-KYPPMKVLMLTLQND- 243
Query: 269 YERRELILLVDTSLNGDFDAEEACR-----FLKVGLLCTQDTPKLRPSMSTVVQ 317
SL +E + F K+ LC Q P+ RP+ + +++
Sbjct: 244 ----------PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 33/294 (11%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRL--KDGKIAAIKVLSAESRQGVKEFLTEIQVISEI 97
SI DD+ IG G V K K+A ++ + + + E L EIQ +S+
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNS---LAQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+V Y V + LV L S + + ++ G H S + T + I
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV-LDESTIATILRE 124
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPA----NMTHVSTRV 210
+ GL +LH+ + IHRD+KA NILL +D + +I+DFG++ + V
Sbjct: 125 VLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 211 AGTIGYLAPEY--AIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDL 268
GT ++APE +RG KADI+SFG+ +E+ +G + + P + +L D
Sbjct: 182 VGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYH-KYPPMKVLMLTLQND- 238
Query: 269 YERRELILLVDTSLNGDFDAEEACR-----FLKVGLLCTQDTPKLRPSMSTVVQ 317
SL +E + F K+ LC Q P+ RP+ + +++
Sbjct: 239 ----------PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIK-VLSAESRQGVKEF-LTEIQVISEIE 98
+ + + + +GEG +G V K R KD G+I AIK L ++ + VK+ + EI+++ ++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQ-TLIGGGHHYSNIQFSWRTRSRICIGIAR 157
HENLV L C + LV+ ++++ L L G Y +Q + I
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQ-------KYLFQIIN 135
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ F H +IIHRDIK NIL+ + K+ DFG A+ + A VA T Y
Sbjct: 136 GIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYR 191
Query: 218 APEYAIRGQVT--RKADIYSFGVLLVEIVSG 246
APE + G V + D+++ G L+ E+ G
Sbjct: 192 APELLV-GDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 62/299 (20%)
Query: 52 IGEGGFGSV-------YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+GEG FG V KGR +A + S +++ L+E V+ ++ H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTL-----IGGGHHYSN------------------- 140
LYG C + +L+ Y + SL L +G G+ S
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 141 --IQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKL 198
I F+W+ I++G+ +L E ++HRD+ A NIL+ + KISDFGL++
Sbjct: 151 DLISFAWQ--------ISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 199 IPANMTHVSTRVAGTI--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT 256
+ ++V R G I ++A E T ++D++SFGVLL EIV+ N +P
Sbjct: 200 VYEEDSYVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 257 EEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 315
E + L +T ER D +EE R + L C + P RP + +
Sbjct: 259 ERLFNLLKTGHRMER------------PDNCSEEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKE--FLTEIQVISEIEH 99
+D+ + IG G +G K R K DGKI K L S ++ ++E+ ++ E++H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 100 ENLVKLYGCCVEGNHRIL--VYNYLENNSLAQTLIGGG--HHYSNIQFSWRTRSRICIGI 155
N+V+ Y ++ + L V Y E LA + G Y + +F R +++ + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+ ++HRD+K +N+ LD K+ DFGLA+++ + + T V GT
Sbjct: 125 KE--CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPY 181
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
Y++PE R K+DI+S G LL E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 46 FSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQG---VKEFLTEIQVISEIEHEN 101
FS + +IG G FG+VY R +++ ++ AIK +S +Q ++ + E++ + ++ H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
++ GC + + LV Y S + L ++ + T G +GLA+
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTH-----GALQGLAY 130
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGYLAPE 220
LH ++IHRD+KA NILL + K+ DFG A ++ PAN GT ++APE
Sbjct: 131 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPE 181
Query: 221 YAI---RGQVTRKADIYSFGVLLVEIV 244
+ GQ K D++S G+ +E+
Sbjct: 182 VILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 23/207 (11%)
Query: 46 FSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQG---VKEFLTEIQVISEIEHEN 101
FS + +IG G FG+VY R +++ ++ AIK +S +Q ++ + E++ + ++ H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
++ GC + + LV Y S + L ++ + T G +GLA+
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTH-----GALQGLAY 169
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGYLAPE 220
LH ++IHRD+KA NILL + K+ DFG A ++ PAN GT ++APE
Sbjct: 170 LHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPE 220
Query: 221 YAI---RGQVTRKADIYSFGVLLVEIV 244
+ GQ K D++S G+ +E+
Sbjct: 221 VILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 29/274 (10%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDGK-IAAIKVLSAESRQGVKEFLT-EIQVISEIEHENLV 103
F+ +++IG+G FG VYKG K + AIK++ E + E + EI V+S+ + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
+ +G ++ ++ YL S L G + I + I I +GL +LH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-------ATILREILKGLDYLH 133
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
E + IHRDIKA+N+LL + K++DFG+A + + V GT ++APE
Sbjct: 134 SERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIK 189
Query: 224 RGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLN 283
+ KADI+S G+ +E+ G + DL+ R L L+ S
Sbjct: 190 QSAYDFKADIWSLGITAIELAKGEPPNS---------------DLHPMRVLFLIPKNS-P 233
Query: 284 GDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQ 317
+ + + F + C P+ RP+ +++
Sbjct: 234 PTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISE 96
+ + DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+V YG + +++ SL Q L G + + ++ I +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVI 114
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GL +L E+ + I+HRD+K SNIL++ K+ DFG++ + +M + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSY 169
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
++PE + ++DI+S G+ LVE+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 132 IG---GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G YS Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 132 IG---GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G YS Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISE 96
+ + DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+V YG + +++ SL Q L G + + ++ I +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVI 114
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GL +L E+ + I+HRD+K SNIL++ K+ DFG++ + +M + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSY 169
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
++PE + ++DI+S G+ LVE+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 13/221 (5%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHENLV 103
F+ + KIG+G FG V+KG + K+ AIK++ E+ +++ EI V+S+ + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
K YG ++ ++ YL S L G + I + I I +GL +LH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-------ATILREILKGLDYLH 136
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
E + IHRDIKA+N+LL + K++DFG+A + + V GT ++APE
Sbjct: 137 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIK 192
Query: 224 RGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLER 264
+ KADI+S G+ +E+ G + P + +L+ +
Sbjct: 193 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 233
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISE 96
+ + DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+V YG + +++ SL Q L G + + ++ I +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVI 114
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GL +L E+ + I+HRD+K SNIL++ K+ DFG++ + +M + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSY 169
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
++PE + ++DI+S G+ LVE+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 133/303 (43%), Gaps = 62/303 (20%)
Query: 52 IGEGGFGSV-------YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+GEG FG V KGR +A + S +++ L+E V+ ++ H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTL-----IGGGHHYSN------------------- 140
LYG C + +L+ Y + SL L +G G+ S
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 141 --IQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKL 198
I F+W+ I++G+ +L E ++HRD+ A NIL+ + KISDFGL++
Sbjct: 151 DLISFAWQ--------ISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 199 IPANMTHVSTRVAGTI--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT 256
+ + V R G I ++A E T ++D++SFGVLL EIV+ N +P
Sbjct: 200 VYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 257 EEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVV 316
E + L +T ER D +EE R + L C + P RP + +
Sbjct: 259 ERLFNLLKTGHRMER------------PDNCSEEMYRLM---LQCWKQEPDKRPVFADIS 303
Query: 317 QML 319
+ L
Sbjct: 304 KDL 306
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISE 96
+ + DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+V YG + +++ SL Q L G + + ++ I +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVI 114
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GL +L E+ + I+HRD+K SNIL++ K+ DFG++ + +M + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSY 169
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
++PE + ++DI+S G+ LVE+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 42/280 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ FL
Sbjct: 96 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKFL 147
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + + H T + ++A
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 255
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
E C +V L C ++RPS S +V
Sbjct: 256 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 115/239 (48%), Gaps = 18/239 (7%)
Query: 14 PRNRVPEVDEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAA 72
P PE + E K K+ A +DF +G+G FG+VY R K K I A
Sbjct: 4 PLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA 63
Query: 73 IKVL--SAESRQGVKEFLT-EIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQ 129
+KVL + + GV+ L E+++ S + H N+++LYG + L+ Y ++ +
Sbjct: 64 LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 123
Query: 130 TLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPK 189
L +F + + +A L++ H + +IHRDIK N+LL K
Sbjct: 124 ELQKLS------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 174
Query: 190 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
I+DFG + P++ T + GT+ YL PE I G++ K D++S GVL E + G+
Sbjct: 175 IADFGWSVHAPSSR---RTTLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 131/299 (43%), Gaps = 62/299 (20%)
Query: 52 IGEGGFGSV-------YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+GEG FG V KGR +A + S +++ L+E V+ ++ H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTL-----IGGGHHYSN------------------- 140
LYG C + +L+ Y + SL L +G G+ S
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 141 --IQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKL 198
I F+W+ I++G+ +L E ++HRD+ A NIL+ + KISDFGL++
Sbjct: 151 DLISFAWQ--------ISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 199 IPANMTHVSTRVAGTI--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPT 256
+ + V R G I ++A E T ++D++SFGVLL EIV+ N +P
Sbjct: 200 VYEEDSXVK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258
Query: 257 EEQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTV 315
E + L +T ER D +EE R + L C + P RP + +
Sbjct: 259 ERLFNLLKTGHRMER------------PDNCSEEMYRLM---LQCWKQEPDKRPVFADI 302
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 107/211 (50%), Gaps = 13/211 (6%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISE 96
+ + DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+V YG + +++ SL Q L G + + ++ I +
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVI 114
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GL +L E+ + I+HRD+K SNIL++ K+ DFG++ + +M + GT Y
Sbjct: 115 KGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSY 169
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
++PE + ++DI+S G+ LVE+ GR
Sbjct: 170 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 42/280 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ FL
Sbjct: 103 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKFL 154
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + + H T + ++A
Sbjct: 155 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 262
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
E C +V L C ++RPS S +V
Sbjct: 263 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 42/280 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ FL
Sbjct: 99 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKFL 150
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + + H T + ++A
Sbjct: 151 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 258
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
E C +V L C ++RPS S +V
Sbjct: 259 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 13/221 (5%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKEFLT-EIQVISEIEHENLV 103
F+ + KIG+G FG V+KG + K+ AIK++ E + E + EI V+S+ + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
K YG ++ ++ YL S L G + I + I I +GL +LH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI-------ATILREILKGLDYLH 121
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
E + IHRDIKA+N+LL + K++DFG+A + + V GT ++APE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIK 177
Query: 224 RGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLER 264
+ KADI+S G+ +E+ G + P + +L+ +
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 218
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 42/280 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ FL
Sbjct: 98 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKFL 149
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + + H T + ++A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 257
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
E C +V L C ++RPS S +V
Sbjct: 258 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 114/229 (49%), Gaps = 35/229 (15%)
Query: 55 GGFGSVYKGRLKDGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENLVKLYGCCVEGN 113
G FG V+K +L + + A+K+ + +Q + E+ E+ + ++HEN+++ G G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKRGT 91
Query: 114 H----RILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV--- 166
L+ + E SL+ L +N+ SW I +ARGLA+LHE++
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL------KANV-VSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 167 ----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTR-VAGTIGYLAPEY 221
+P I HRDIK+ N+LL +LT I+DFGLA A + T GT Y+APE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 222 ---AIRGQ--VTRKADIYSFGVLLVEIVSGRCNT------NMRLPTEEQ 259
AI Q + D+Y+ G++L E+ S RC LP EE+
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS-RCTAADGPVDEYMLPFEEE 252
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 42/280 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ FL
Sbjct: 98 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKFL 149
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + + H T + ++A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 257
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
E C +V L C ++RPS S +V
Sbjct: 258 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 132 IG---GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G YS Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 42/280 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ FL
Sbjct: 157 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKFL 208
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + + H T + ++A
Sbjct: 209 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 316
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
E C +V L C ++RPS S +V
Sbjct: 317 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYL 132
Query: 132 IG---GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G YS Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 132/280 (47%), Gaps = 42/280 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ FL
Sbjct: 99 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKFL 150
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + + H T + ++A
Sbjct: 151 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 258
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
E C +V L C ++RPS S +V
Sbjct: 259 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYL 132
Query: 132 IG---GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G YS Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHEN 101
DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+V YG + +++ SL Q L G + + ++ I + +GL +
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTY 146
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L E+ + I+HRD+K SNIL++ K+ DFG++ + +M + GT Y++PE
Sbjct: 147 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPER 201
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSGR 247
+ ++DI+S G+ LVE+ GR
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 10/210 (4%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKE--FLTEIQVISEIEH 99
+D+ + IG G +G K R K DGKI K L S ++ ++E+ ++ E++H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 100 ENLVKLYGCCVEGNHRIL--VYNYLENNSLAQTLIGGG--HHYSNIQFSWRTRSRICIGI 155
N+V+ Y ++ + L V Y E LA + G Y + +F R +++ + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+ ++HRD+K +N+ LD K+ DFGLA+++ + T + GT
Sbjct: 125 KE--CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPY 181
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
Y++PE R K+DI+S G LL E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y + + L +F + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS------KFDEQRTATYI 119
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 120 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCG 173
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 174 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 132 IG---GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G YS Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHEN 101
DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+V YG + +++ SL Q L G + + ++ I + +GL +
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTY 181
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L E+ + I+HRD+K SNIL++ K+ DFG++ + + ++ GT Y++PE
Sbjct: 182 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPER 236
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSGR 247
+ ++DI+S G+ LVE+ GR
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 49 INKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYG 107
+ ++G+G FG VYK + K+ G +AA KV+ +S + +++++ EI++++ +H +VKL G
Sbjct: 16 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 108 CCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVR 167
++ + ++ ++ + Q +C + L FLH +
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI-----QVVCRQMLEALNFLHSK-- 128
Query: 168 PHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTR--VAGTIGYLAPEYAIRG 225
IIHRD+KA N+L+ + +++DFG++ N+ + R GT ++APE +
Sbjct: 129 -RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 226 QVTR-----KADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDT 280
+ KADI+S G+ L+E+ + P E + + + LL +
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM------AQIEPPHHELNPMRVLLKIAKSDPPTLLTPS 238
Query: 281 SLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQ 317
+ +F FLK+ L P+ RPS + +++
Sbjct: 239 KWSVEFR-----DFLKIAL---DKNPETRPSAAQLLE 267
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 132 IG---GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G YS Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ KI+DFGLA+ I N+ G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 117
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 118 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCG 171
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 172 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 117
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 118 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCG 171
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 172 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHEN 101
DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+V YG + +++ SL Q L G + + ++ I + +GL +
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTY 122
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L E+ + I+HRD+K SNIL++ K+ DFG++ + + ++ GT Y++PE
Sbjct: 123 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTRSYMSPER 177
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSGR 247
+ ++DI+S G+ LVE+ GR
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 115
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T ++G
Sbjct: 116 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSG 169
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 170 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 96/200 (48%), Gaps = 27/200 (13%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
K+G G FG V+ A+K + S V+ FL E V+ ++H+ LVKL+
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Query: 110 VEGNHRILVYNYLENNSLAQTLI---GGGHHYSN-IQFSWRTRSRICIGIARGLAFLHEE 165
+ I+ ++ SL L G I FS IA G+AF+ +
Sbjct: 247 TKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPKLIDFS--------AQIAEGMAFIEQR 297
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
+ IHRD++A+NIL+ L KI+DFGLA++ I + APE G
Sbjct: 298 ---NYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFG 344
Query: 226 QVTRKADIYSFGVLLVEIVS 245
T K+D++SFG+LL+EIV+
Sbjct: 345 SFTIKSDVWSFGILLMEIVT 364
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 131/277 (47%), Gaps = 33/277 (11%)
Query: 49 INKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYG 107
+ ++G+G FG VYK + K+ G +AA KV+ +S + +++++ EI++++ +H +VKL G
Sbjct: 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 108 CCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVR 167
++ + ++ ++ + Q +C + L FLH +
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI-----QVVCRQMLEALNFLHSK-- 136
Query: 168 PHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTR--VAGTIGYLAPEYAIRG 225
IIHRD+KA N+L+ + +++DFG++ N+ + R GT ++APE +
Sbjct: 137 -RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCE 192
Query: 226 QVTR-----KADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDT 280
+ KADI+S G+ L+E+ + P E + + + LL +
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM------AQIEPPHHELNPMRVLLKIAKSDPPTLLTPS 246
Query: 281 SLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQ 317
+ +F FLK+ L P+ RPS + +++
Sbjct: 247 KWSVEFR-----DFLKIAL---DKNPETRPSAAQLLE 275
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 131
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 132 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCG 185
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 186 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 114
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 115 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCG 168
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 169 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 132 IG---GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G YS Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ +I+DFGLA+ I N+ + G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMRIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 103/214 (48%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
+G+G FG K ++ G++ +K L + + FL E++V+ +EH N++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
+ + Y++ +L + + Q+ W R IA G+A+LH +I
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKS-----MDSQYPWSQRVSFAKDIASGMAYLHSM---NI 129
Query: 171 IHRDIKASNILLDKDLTPKISDFGLAKLI------PANMTHVST-------RVAGTIGYL 217
IHRD+ + N L+ ++ ++DFGLA+L+ P + + V G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTN 251
APE K D++SFG++L EI+ GR N +
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 119
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 120 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCG 173
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 174 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ T + GT+ YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYL 173
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 36/297 (12%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKD-------GKIAAIKVLSAESRQGVKEFLTE 90
E ++ + + + ++G+G FG VY+G +D ++A V + S + EFL E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----GGHHYSNIQFSWR 146
V+ ++V+L G +G ++V + + L L ++ + +
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTH 205
++ IA G+A+L+ + +HRD+ A N ++ D T KI DFG+ + + +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERT 265
+ + ++APE G T +D++SFGV+L EI S L E+
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQP 232
Query: 266 WD-LYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQML 319
+ L + L ++D G D + C R + +C Q PK+RP+ +V +L
Sbjct: 233 YQGLSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 115
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 116 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCG 169
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 170 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 119
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 120 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCG 173
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 174 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 13/206 (6%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHEN 101
DDF I+++G G G V+K K G + A K++ E + ++ + + E+QV+ E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+V YG + +++ SL Q L G + + ++ I + +GL +
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTY 138
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L E+ + I+HRD+K SNIL++ K+ DFG++ + +M + GT Y++PE
Sbjct: 139 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMSPER 193
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSGR 247
+ ++DI+S G+ LVE+ GR
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 42/300 (14%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKD-------GKIAAIKVLSAESRQGVKEFLTE 90
E ++ + + + ++G+G FG VY+G +D ++A V + S + EFL E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----GGHHYSNIQFSWR 146
V+ ++V+L G +G ++V + + L L ++ + +
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV 206
++ IA G+A+L+ + +HRD+ A N ++ D T KI DFG+ + I +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY- 186
Query: 207 STRVAG----TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
R G + ++APE G T +D++SFGV+L EI S L
Sbjct: 187 --RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LA 229
Query: 263 ERTWD-LYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQML 319
E+ + L + L ++D G D + C R + +C Q PK+RP+ +V +L
Sbjct: 230 EQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ T + GT+ YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 173
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 118
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ T + GT+ YL
Sbjct: 119 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 172
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 173 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 133/297 (44%), Gaps = 36/297 (12%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKD-------GKIAAIKVLSAESRQGVKEFLTE 90
E ++ + + + ++G+G FG VY+G +D ++A V + S + EFL E
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 67
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----GGHHYSNIQFSWR 146
V+ ++V+L G +G ++V + + L L ++ + +
Sbjct: 68 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 127
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTH 205
++ IA G+A+L+ + +HRD+ A N ++ D T KI DFG+ + + +
Sbjct: 128 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 184
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERT 265
+ + ++APE G T +D++SFGV+L EI S L E+
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQP 229
Query: 266 WD-LYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQML 319
+ L + L ++D G D + C R + +C Q PK+RP+ +V +L
Sbjct: 230 YQGLSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ T + GT+ YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYL 173
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 13/206 (6%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHEN 101
DDF I+++G G G V K + + G I A K++ E + ++ + + E+QV+ E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+V YG + +++ SL Q L + ++ I + RGLA+
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL------KEAKRIPEEILGKVSIAVLRGLAY 129
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L E + I+HRD+K SNIL++ K+ DFG++ + +M + GT Y+APE
Sbjct: 130 LRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---ANSFVGTRSYMAPER 184
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSGR 247
+ ++DI+S G+ LVE+ GR
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 119
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ T + G
Sbjct: 120 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCG 173
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G+ K D++S GVL E + G+
Sbjct: 174 TLDYLPPE-XIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ T + GT+ YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYL 173
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 36/297 (12%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKD-------GKIAAIKVLSAESRQGVKEFLTE 90
E ++ + + + ++G+G FG VY+G +D ++A V + S + EFL E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----GGHHYSNIQFSWR 146
V+ ++V+L G +G ++V + + L L ++ + +
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQ 130
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTH 205
++ IA G+A+L+ + +HRD+ A N ++ D T KI DFG+ + I +
Sbjct: 131 EMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERT 265
+ + ++APE G T +D++SFGV+L EI S L E+
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQP 232
Query: 266 WD-LYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQML 319
+ L + L ++D G D + C R + +C Q PK+RP+ +V +L
Sbjct: 233 YQGLSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 123
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ T + GT+ YL
Sbjct: 124 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 177
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 178 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 134/302 (44%), Gaps = 36/302 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD-------GKIAAIKVLSAESRQGVK 85
+Y E ++ + + + ++G+G FG VY+G +D ++A V + S +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----GGHHYSNI 141
EFL E V+ ++V+L G +G ++V + + L L ++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 142 QFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIP 200
+ + ++ IA G+A+L+ + +HRD+ A N ++ D T KI DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + ++APE G T +D++SFGV+L EI S
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------------- 227
Query: 261 LLERTWD-LYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
L E+ + L + L ++D G D + C R + +C Q P +RP+ +V
Sbjct: 228 LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284
Query: 318 ML 319
+L
Sbjct: 285 LL 286
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 97 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 148
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 149 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 256
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 257 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 26/260 (10%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAIKVL 76
+G+ +L + D + +GEG FG V K + K+ A+K+L
Sbjct: 62 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 121
Query: 77 SAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG- 133
+ + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 122 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 181
Query: 134 --GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK 184
G YS Q +++ +ARG+ +L + IHRD+ A N+L+ +
Sbjct: 182 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 238
Query: 185 DLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVLLVE 242
+ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL+ E
Sbjct: 239 NNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 297
Query: 243 IVSGRCNTNMRLPTEEQYLL 262
I + + +P EE + L
Sbjct: 298 IFTLGGSPYPGIPVEELFKL 317
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 26/260 (10%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAIKVL 76
+G+ +L + D + +GEG FG V K + K+ A+K+L
Sbjct: 8 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 67
Query: 77 SAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG- 133
+ + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 68 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 127
Query: 134 --GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK 184
G YS Q +++ +ARG+ +L + IHRD+ A N+L+ +
Sbjct: 128 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 184
Query: 185 DLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVLLVE 242
+ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL+ E
Sbjct: 185 NNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 243
Query: 243 IVSGRCNTNMRLPTEEQYLL 262
I + + +P EE + L
Sbjct: 244 IFTLGGSPYPGIPVEELFKL 263
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 26/260 (10%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAIKVL 76
+G+ +L + D + +GEG FG V K + K+ A+K+L
Sbjct: 5 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 64
Query: 77 SAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG- 133
+ + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 65 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 124
Query: 134 --GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK 184
G YS Q +++ +ARG+ +L + IHRD+ A N+L+ +
Sbjct: 125 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE 181
Query: 185 DLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVLLVE 242
+ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL+ E
Sbjct: 182 NNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 240
Query: 243 IVSGRCNTNMRLPTEEQYLL 262
I + + +P EE + L
Sbjct: 241 IFTLGGSPYPGIPVEELFKL 260
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 19/248 (7%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIK-VLSAESRQGVKEF-LTEIQVISEIEHE 100
+ + I KIGEG +G V+K R +D G+I AIK L +E +K+ L EI+++ +++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQT--LIGGGHHYSNIQFSWRTRSRICIGIARG 158
NLV L LV+ Y ++ L + G + +W+T +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQA 114
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
+ F H+ + IHRD+K NIL+ K K+ DFG A+L+ + VA T Y +
Sbjct: 115 VNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRS 170
Query: 219 PEYAI-RGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTW-DLYERRELIL 276
PE + Q D+++ G + E++SG + ++ YL+ +T DL R + +
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF 230
Query: 277 LVDTSLNG 284
+ +G
Sbjct: 231 STNQYFSG 238
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKE--FLTEIQVISEIEH 99
+D+ + IG G +G K R K DGKI K L S ++ ++E+ ++ E++H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 100 ENLVKLYGCCVEGNHRIL--VYNYLENNSLAQTLIGGG--HHYSNIQFSWRTRSRICIGI 155
N+V+ Y ++ + L V Y E LA + G Y + +F R +++ + +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+ ++HRD+K +N+ LD K+ DFGLA+++ + + GT
Sbjct: 125 KE--CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-EDFAKEFVGTPY 181
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
Y++PE R K+DI+S G LL E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 123/260 (47%), Gaps = 26/260 (10%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAIKVL 76
+G+ +L + D + +GEG FG V K + K+ A+K+L
Sbjct: 3 LAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKML 62
Query: 77 SAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG- 133
+ + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 63 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR 122
Query: 134 --GGHHYS-------NIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK 184
G YS Q +++ +ARG+ +L + IHRD+ A N+L+ +
Sbjct: 123 RPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTE 179
Query: 185 DLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVLLVE 242
+ KI+DFGLA+ I N+ + G + ++APE T ++D++SFGVL+ E
Sbjct: 180 NNVMKIADFGLARDI-NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWE 238
Query: 243 IVSGRCNTNMRLPTEEQYLL 262
I + + +P EE + L
Sbjct: 239 IFTLGGSPYPGIPVEELFKL 258
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%), Gaps = 18/239 (7%)
Query: 14 PRNRVPEVDEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAA 72
P PE + E K K+ A +DF +G+G FG+VY R K K I A
Sbjct: 4 PLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILA 63
Query: 73 IKVL--SAESRQGVKEFLT-EIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQ 129
+KVL + + GV+ L E+++ S + H N+++LYG + L+ Y ++ +
Sbjct: 64 LKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR 123
Query: 130 TLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPK 189
L +F + + +A L++ H + +IHRDIK N+LL K
Sbjct: 124 ELQKLS------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 174
Query: 190 ISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
I+DFG + P++ + GT+ YL PE I G++ K D++S GVL E + G+
Sbjct: 175 IADFGWSVHAPSSR---RDDLCGTLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 116
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ T + GT+ YL
Sbjct: 117 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYL 170
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 171 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 116 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 167
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 168 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 275
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 276 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 96 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 147
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 148 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 255
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 256 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y + + L +F + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS------KFDEQRTATYI 119
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ + G
Sbjct: 120 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXG 173
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 174 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 93 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 144
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 145 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 252
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 253 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 90 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 141
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 142 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 249
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 250 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 117 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 168
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 169 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 276
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 277 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 98 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 149
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 257
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 258 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 98 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 149
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 150 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 257
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 258 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 95 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 146
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 147 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 254
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 255 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 136/308 (44%), Gaps = 36/308 (11%)
Query: 27 GIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD-------GKIAAIKVLSAE 79
G+ +Y E ++ + + + ++G+G FG VY+G +D ++A V +
Sbjct: 1 GVFPSSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 60
Query: 80 SRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----GG 135
S + EFL E V+ ++V+L G +G ++V + + L L
Sbjct: 61 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE 120
Query: 136 HHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGL 195
++ + + ++ IA G+A+L+ + +HR++ A N ++ D T KI DFG+
Sbjct: 121 NNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGM 177
Query: 196 AKLI-PANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRL 254
+ I + + + ++APE G T +D++SFGV+L EI S
Sbjct: 178 TRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------- 228
Query: 255 PTEEQYLLERTWD-LYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPS 311
L E+ + L + L ++D G D + C R + +C Q P +RP+
Sbjct: 229 ------LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPT 279
Query: 312 MSTVVQML 319
+V +L
Sbjct: 280 FLEIVNLL 287
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTE 90
E +A + + ++G+G FG VY+G K + ++A V A S + EFL E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF----SWR 146
V+ E ++V+L G +G +++ + L L N S
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTH 205
++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + + +
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERT 265
+ + +++PE G T +D++SFGV+L EI + L E+
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQP 225
Query: 266 WDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
+ +++ V G D + C L++ +C Q PK+RPS ++
Sbjct: 226 YQGLSNEQVLRFVMEG--GLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 42/279 (15%)
Query: 52 IGEGGFGSVYKGRL--KDGKI--AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
IG G FG VY G L DGK A+K L+ + G V +FLTE ++ + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G C+ EG+ ++V Y+++ L + H+ + + I G +A+G+ +L
Sbjct: 97 GICLRSEGS-PLVVLPYMKHGDLRNFIRNETHNPT-------VKDLIGFGLQVAKGMKYL 148
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
+ +HRD+ A N +LD+ T K++DFGLA+ + H T + ++A
Sbjct: 149 ASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVD 279
E + T K+D++SFGVLL E++ T P + + T L + R L+
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRLL---- 256
Query: 280 TSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
E C +V L C ++RPS S +V
Sbjct: 257 --------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 117
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI++FG + P++ T + G
Sbjct: 118 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCG 171
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 172 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 116
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI++FG + P++ T + G
Sbjct: 117 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCG 170
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 171 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 115
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ + G
Sbjct: 116 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCG 169
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 170 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 146/309 (47%), Gaps = 44/309 (14%)
Query: 49 INKIGEGGFGSVYKG-RLKDGKIA----AIKVLSAESRQGVK-EFLTEIQVISEIEHENL 102
+ +G G FG+VYKG + +G+ AIK+L+ + EF+ E +++ ++H +L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 103 VKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGIARG 158
V+L G C+ + LV + + L + + H NI +W C+ IA+G
Sbjct: 80 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYV---HEHKDNIGSQLLLNW------CVQIAKG 129
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L E ++HRD+ A N+L+ KI+DFGLA+L+ + + I ++
Sbjct: 130 MMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEE-QYLLER----------TW 266
A E + T ++D++S+GV + E+++ +PT E LLE+ T
Sbjct: 187 ALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTI 246
Query: 267 DLYERRELILLVDTSLNGDFDAEEACRFLKVG-----LLCTQDTPKLR---PSMSTVVQM 318
D+Y ++D F E A F ++ L Q +++ P+ S Q
Sbjct: 247 DVYMVMVKCWMIDADSRPKF-KELAAEFSRMARDPQRYLVIQGDDRMKLPSPNDSKFFQN 305
Query: 319 LMGEKDIDD 327
L+ E+D++D
Sbjct: 306 LLDEEDLED 314
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 116
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ + G
Sbjct: 117 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCG 170
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 171 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 123/263 (46%), Gaps = 26/263 (9%)
Query: 22 DEEFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY--------KGRLKDGKIAAI 73
D +G+ +L + D + +GEG FG V K + K+ A+
Sbjct: 13 DPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAV 72
Query: 74 KVLSAE-SRQGVKEFLTEIQVISEI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
K+L + + + + + ++E++++ I +H+N++ L G C + ++ Y +L + L
Sbjct: 73 KMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
Query: 132 IG----GGHHYSNI------QFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL 181
G +I Q +++ +ARG+ +L + IHRD+ A N+L
Sbjct: 133 RARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189
Query: 182 LDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYAIRGQVTRKADIYSFGVL 239
+ ++ KI+DFGLA+ I N+ G + ++APE T ++D++SFGVL
Sbjct: 190 VTENNVMKIADFGLARDI-NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 240 LVEIVSGRCNTNMRLPTEEQYLL 262
+ EI + + +P EE + L
Sbjct: 249 MWEIFTLGGSPYPGIPVEELFKL 271
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 108/216 (50%), Gaps = 18/216 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQ 92
K+ A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E++
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+ S + H N+++LYG + L+ Y ++ + L +F + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYI 117
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A L++ H + +IHRDIK N+LL KI+DFG + P++ + G
Sbjct: 118 TELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCG 171
Query: 213 TIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
T+ YL PE I G++ K D++S GVL E + G+
Sbjct: 172 TLDYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 35/208 (16%)
Query: 49 INKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
+ IG+G FG V G + K+A + + + Q FL E V++++ H NLV+L G
Sbjct: 11 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV 67
Query: 109 CVEGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG----------IAR 157
VE + +V Y+ SL L R+R R +G +
Sbjct: 68 IVEEKGGLYIVTEYMAKGSLVDYL--------------RSRGRSVLGGDCLLKFSLDVCE 113
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
+ +L + +HRD+ A N+L+ +D K+SDFGL K A+ T + ++ + +
Sbjct: 114 AMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWT 166
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
APE + + K+D++SFG+LL EI S
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 35/208 (16%)
Query: 49 INKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
+ IG+G FG V G + K+A + + + Q FL E V++++ H NLV+L G
Sbjct: 26 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV 82
Query: 109 CVEGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG----------IAR 157
VE + +V Y+ SL L R+R R +G +
Sbjct: 83 IVEEKGGLYIVTEYMAKGSLVDYL--------------RSRGRSVLGGDCLLKFSLDVCE 128
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
+ +L + +HRD+ A N+L+ +D K+SDFGL K A+ T + ++ + +
Sbjct: 129 AMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWT 181
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
APE + + K+D++SFG+LL EI S
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 35/208 (16%)
Query: 49 INKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
+ IG+G FG V G + K+A + + + Q FL E V++++ H NLV+L G
Sbjct: 198 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV 254
Query: 109 CVEGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG----------IAR 157
VE + +V Y+ SL L R+R R +G +
Sbjct: 255 IVEEKGGLYIVTEYMAKGSLVDYL--------------RSRGRSVLGGDCLLKFSLDVCE 300
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
+ +L + +HRD+ A N+L+ +D K+SDFGL K A+ T + ++ + +
Sbjct: 301 AMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWT 353
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
APE + + K+D++SFG+LL EI S
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 99/208 (47%), Gaps = 35/208 (16%)
Query: 49 INKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
+ IG+G FG V G + K+A + + + Q FL E V++++ H NLV+L G
Sbjct: 17 LQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGV 73
Query: 109 CVEGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG----------IAR 157
VE + +V Y+ SL L R+R R +G +
Sbjct: 74 IVEEKGGLYIVTEYMAKGSLVDYL--------------RSRGRSVLGGDCLLKFSLDVCE 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
+ +L + +HRD+ A N+L+ +D K+SDFGL K A+ T + ++ + +
Sbjct: 120 AMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWT 172
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
APE + K+D++SFG+LL EI S
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 34/298 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVK 85
+Y E +A + + ++G+G FG VY+G K + ++A V A S +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-- 143
EFL E V+ E ++V+L G +G +++ + L L N
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 144 --SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIP 200
S ++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + +++PE G T +D++SFGV+L EI +
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 229
Query: 261 LLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
L E+ + +++ V G D + C ++ +C Q PK+RPS ++
Sbjct: 230 LAEQPYQGLSNEQVLRFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K+ K I A+KVL + + GV+ L E+++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ + GT+ YL
Sbjct: 120 ALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 38/231 (16%)
Query: 55 GGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISE--IEHENLVKLYGCCVEG 112
G FG V+K +L + A+K+ + +Q + +E ++ S ++HENL++ G
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQS---WQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 113 NHR----ILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV-- 166
++ L+ + + SL L G NI +W + ++RGL++LHE+V
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKG------NI-ITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 167 ------RPHIIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAP 219
+P I HRD K+ N+LL DLT ++DFGLA + P + GT Y+AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 220 EY---AIRGQ--VTRKADIYSFGVLLVEIVSGRCNT------NMRLPTEEQ 259
E AI Q + D+Y+ G++L E+VS RC LP EE+
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELVS-RCKAADGPVDEYMLPFEEE 244
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 52 IGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQG--VKEFLTEIQVISEIEHENLVKLYGC 108
+G+G FG V K + + + A+KV++ S + L E++++ +++H N++KL+
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGLAFLHE 164
+ + +V L GG + I +FS +RI + G+ ++H
Sbjct: 90 LEDSSSFYIV----------GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH- 138
Query: 165 EVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
+ +I+HRD+K NILL+ KD KI DFGL+ N T + R+ GT Y+APE
Sbjct: 139 --KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE- 193
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
+RG K D++S GV+L ++SG
Sbjct: 194 VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ + GT+ YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 173
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESR-QGVKEF-LTEIQVISEIEHEN 101
+ + + KIGEG +G VYK + G+ A+K + E +G+ + EI ++ E++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 102 LVKLYGCCVEGNHRILVYNYLENN--SLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+VKLY +LV+ +L+ + L GG + F + + G+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGI 113
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
A+ H+ ++HRD+K N+L++++ KI+DFGLA+ + + V T+ Y AP
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAP 169
Query: 220 EYAI-RGQVTRKADIYSFGVLLVEIVSG 246
+ + + + DI+S G + E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 94
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY C + +Y +N L + + G F I
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 148
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 149 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESR-QGVKEF-LTEIQVISEIEHEN 101
+ + + KIGEG +G VYK + G+ A+K + E +G+ + EI ++ E++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 102 LVKLYGCCVEGNHRILVYNYLENN--SLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+VKLY +LV+ +L+ + L GG + F + + G+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGI 113
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
A+ H+ ++HRD+K N+L++++ KI+DFGLA+ + + V T+ Y AP
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAP 169
Query: 220 EYAI-RGQVTRKADIYSFGVLLVEIVSG 246
+ + + + DI+S G + E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ + GT+ YL
Sbjct: 120 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYL 173
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 34/306 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVK 85
+Y E +A + + ++G+G FG VY+G K + ++A V A S +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-- 143
EFL E V+ E ++V+L G +G +++ + L L N
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 144 --SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-P 200
S ++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + I
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + +++PE G T +D++SFGV+L EI +
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 235
Query: 261 LLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQM 318
L E+ + +++ V G D + C ++ +C Q PK+RPS ++
Sbjct: 236 LAEQPYQGLSNEQVLRFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 319 LMGEKD 324
+ E +
Sbjct: 294 IKEEME 299
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 34/306 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVK 85
+Y E +A + + ++G+G FG VY+G K + ++A V A S +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-- 143
EFL E V+ E ++V+L G +G +++ + L L +N
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 144 --SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIP 200
S ++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + +++PE G T +D++SFGV+L EI +
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 235
Query: 261 LLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQM 318
L E+ + +++ V G D + C ++ +C Q PK+RPS ++
Sbjct: 236 LAEQPYQGLSNEQVLRFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 319 LMGEKD 324
+ E +
Sbjct: 294 IKEEME 299
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 36/294 (12%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKD-------GKIAAIKVLSAESRQGVKEFLTEIQV 93
++ + + + ++G+G FG VY+G +D ++A V + S + EFL E V
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----GGHHYSNIQFSWRTRS 149
+ ++V+L G +G ++V + + L L ++ + +
Sbjct: 73 MKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMI 132
Query: 150 RICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVST 208
++ IA G+A+L+ + +HRD+ A N ++ D T KI DFG+ + I +
Sbjct: 133 QMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 209 RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWD- 267
+ + ++APE G T +D++SFGV+L EI S L E+ +
Sbjct: 190 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQG 234
Query: 268 LYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQML 319
L + L ++D G D + C R + +C Q PK+RP+ +V +L
Sbjct: 235 LSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 19/219 (8%)
Query: 34 YSYKELSIATDDFSPINKIGE-GGFGSVYKGRLKDGKI-AAIKVLSAESRQGVKEFLTEI 91
Y + + +DF I IGE G FG VYK + K+ + AA KV+ +S + +++++ EI
Sbjct: 1 YEHVTRDLNPEDFWEI--IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEI 58
Query: 92 QVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
+++ +H N+VKL N+ ++ + ++ ++ + Q +
Sbjct: 59 DILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQI-----QVV 113
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
C L +LH+ IIHRD+KA NIL D K++DFG++
Sbjct: 114 CKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI 170
Query: 212 GTIGYLAPEYAIRGQVTR------KADIYSFGVLLVEIV 244
GT ++APE + + ++ KAD++S G+ L+E+
Sbjct: 171 GTPYWMAPE-VVMCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 129/303 (42%), Gaps = 34/303 (11%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAES 80
+ +Y E +A + + ++G+G FG VY+G K + ++A V A S
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 81 RQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSN 140
+ EFL E V+ E ++V+L G +G +++ + L L N
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 141 IQF----SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA 196
S ++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 197 K-LIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLP 255
+ + + + + +++PE G T +D++SFGV+L EI +
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------- 228
Query: 256 TEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMS 313
L E+ + +++ V G D + C ++ +C Q PK+RPS
Sbjct: 229 -----LAEQPYQGLSNEQVLRFVMEG--GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 281
Query: 314 TVV 316
++
Sbjct: 282 EII 284
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 18/208 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEIEH 99
+DF +G+G FG+VY R + K I A+KVL + + GV+ L E+++ S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
N+++LYG + L+ Y ++ + L +F + + +A L
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------RFDEQRTATYITELANAL 125
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
++ H + +IHRDIK N+LL + KI+DFG + P++ T + GT+ YL P
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 179
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E I G++ K D++S GVL E + G
Sbjct: 180 E-MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 129/303 (42%), Gaps = 34/303 (11%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAES 80
+ +Y E +A + + ++G+G FG VY+G K + ++A V A S
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 81 RQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSN 140
+ EFL E V+ E ++V+L G +G +++ + L L N
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 141 IQF----SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA 196
S ++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMT 178
Query: 197 KLI-PANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLP 255
+ I + + + +++PE G T +D++SFGV+L EI +
Sbjct: 179 RDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------- 228
Query: 256 TEEQYLLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMS 313
L E+ + +++ V G D + C ++ +C Q PK+RPS
Sbjct: 229 -----LAEQPYQGLSNEQVLRFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFL 281
Query: 314 TVV 316
++
Sbjct: 282 EII 284
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 30/282 (10%)
Query: 49 INKIGEGGFGSVYKGRL-----KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
I+++G+G FGSV R G + A+K L ++F EIQ++ + + +V
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 74
Query: 104 KLYGCCV-EGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFS--WRTRSRICIGIARGL 159
K G G + LV YL + L L H + + S S+IC +G+
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQIC----KGM 127
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYL 217
+L +HRD+ A NIL++ + KI+DFGLAKL+P + + R G I +
Sbjct: 128 EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 184
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL--ERTWDLYERRELI 275
APE +R++D++SFGV+L E+ + C+ + E ++ ER R +
Sbjct: 185 APESLSDNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEFLRMMGSERDVPALSRLLEL 243
Query: 276 LLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTV 315
L L A AC ++ LC +P+ RPS S +
Sbjct: 244 LEEGQRL----PAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 122
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ + GT+ YL
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RAALCGTLDYL 176
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 130/282 (46%), Gaps = 30/282 (10%)
Query: 49 INKIGEGGFGSVYKGRL-----KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
I+++G+G FGSV R G + A+K L ++F EIQ++ + + +V
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 87
Query: 104 KLYGCCV-EGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFS--WRTRSRICIGIARGL 159
K G G + LV YL + L L H + + S S+IC +G+
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQIC----KGM 140
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYL 217
+L +HRD+ A NIL++ + KI+DFGLAKL+P + + R G I +
Sbjct: 141 EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 197
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL--ERTWDLYERRELI 275
APE +R++D++SFGV+L E+ + C+ + E ++ ER R +
Sbjct: 198 APESLSDNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256
Query: 276 LLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTV 315
L L A AC ++ LC +P+ RPS S +
Sbjct: 257 LEEGQRL----PAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 120
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 176
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 177 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESR-QGVKEF-LTEIQVISEIEHEN 101
+ + + KIGEG +G VYK + G+ A+K + E +G+ + EI ++ E++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 102 LVKLYGCCVEGNHRILVYNYLENN--SLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+VKLY +LV+ +L+ + L GG + F + + G+
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSF--------LLQLLNGI 113
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
A+ H+ ++HRD+K N+L++++ KI+DFGLA+ + + + T+ Y AP
Sbjct: 114 AYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAP 169
Query: 220 EYAI-RGQVTRKADIYSFGVLLVEIVSG 246
+ + + + DI+S G + E+V+G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 34/306 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVK 85
+Y E +A + + ++G+G FG VY+G K + ++A V A S +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-- 143
EFL E V+ E ++V+L G +G +++ + L L N
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 144 --SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIP 200
S ++ IA G+A+L+ +HRD+ A N + +D T KI DFG+ + +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + +++PE G T +D++SFGV+L EI +
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 222
Query: 261 LLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQM 318
L E+ + +++ V G D + C L++ +C Q PK+RPS ++
Sbjct: 223 LAEQPYQGLSNEQVLRFVME--GGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISS 280
Query: 319 LMGEKD 324
+ E +
Sbjct: 281 IKEEME 286
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 142/325 (43%), Gaps = 42/325 (12%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ D F + IG+G FG V + D K+ A+K ++ + R V+ E+Q++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGG---HHYSNIQFSWRTRSRICI 153
+EH LV L+ + +V + L+GG H N+ F T
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVD---------LLLGGDLRYHLQQNVHFKEETVKLFIC 122
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+ L +L + IIHRD+K NILLD+ I+DF +A ++P T ++T +AGT
Sbjct: 123 ELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGT 177
Query: 214 IGYLAPE-YAIR--GQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYE 270
Y+APE ++ R + D +S GV E++ GR ++R T
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS------------ 225
Query: 271 RRELILLVDTSLNGDFDA--EEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDD 328
+E++ +T++ A +E LK L + P R S + VQ DI+ D
Sbjct: 226 -KEIVHTFETTVVTYPSAWSQEMVSLLKKLL---EPNPDQRFSQLSDVQNFPYMNDINWD 281
Query: 329 KITKPGLISDFMDLKVRGPPKPKLE 353
+ + LI F+ K R P E
Sbjct: 282 AVFQKRLIPGFIPNKGRLNCDPTFE 306
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 34/306 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVK 85
+Y E +A + + ++G+G FG VY+G K + ++A V A S +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-- 143
EFL E V+ E ++V+L G +G +++ + L L N
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 155
Query: 144 --SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIP 200
S ++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + +
Sbjct: 156 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + +++PE G T +D++SFGV+L EI +
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 257
Query: 261 LLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQM 318
L E+ + +++ V G D + C ++ +C Q PK+RPS ++
Sbjct: 258 LAEQPYQGLSNEQVLRFVMEG--GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 315
Query: 319 LMGEKD 324
+ E +
Sbjct: 316 IKEEME 321
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 113
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 170 RAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 131/306 (42%), Gaps = 34/306 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVK 85
+Y E +A + + ++G+G FG VY+G K + ++A V A S +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-- 143
EFL E V+ E ++V+L G +G +++ + L L N
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 144 --SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIP 200
S ++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + +++PE G T +D++SFGV+L EI +
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 229
Query: 261 LLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQM 318
L E+ + +++ V G D + C ++ +C Q PK+RPS ++
Sbjct: 230 LAEQPYQGLSNEQVLRFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 287
Query: 319 LMGEKD 324
+ E +
Sbjct: 288 IKEEME 293
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 129/298 (43%), Gaps = 34/298 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVK 85
+Y E +A + + ++G+G FG VY+G K + ++A V A S +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-- 143
EFL E V+ E ++V+L G +G +++ + L L +N
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 144 --SWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIP 200
S ++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + +++PE G T +D++SFGV+L EI +
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT--------------- 225
Query: 261 LLERTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
L E+ + +++ V G D + C ++ +C Q PK+RPS ++
Sbjct: 226 LAEQPYQGLSNEQVLRFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 21/208 (10%)
Query: 49 INKIGEGGFGSVYKGRL-----KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
I+++G+G FGSV R G + A+K L ++F EIQ++ + + +V
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 75
Query: 104 KLYGCCV-EGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFS--WRTRSRICIGIARGL 159
K G G + LV YL + L L H + + S S+IC +G+
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQIC----KGM 128
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYL 217
+L +HRD+ A NIL++ + KI+DFGLAKL+P + + R G I +
Sbjct: 129 EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY 185
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
APE +R++D++SFGV+L E+ +
Sbjct: 186 APESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 21/216 (9%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEI 97
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICI 153
H N+VKL N LV+ +L + A L G
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLF 114
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T
Sbjct: 115 QLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-T 170
Query: 214 IGYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
+ Y APE + + A DI+S G + E+V+ R
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEI 97
A +DF +G+G FG+VY R K K I A+KVL + + GV+ L E+++ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
H N+++LYG + L+ Y ++ + L +F + + +A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELAN 122
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L++ H + +IHRDIK N+LL KI+DFG + P++ + GT+ YL
Sbjct: 123 ALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYL 176
Query: 218 APEYAIRGQV-TRKADIYSFGVLLVEIVSGR 247
PE I G++ K D++S GVL E + G+
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 49 INKIGEGGFGSVYKGRL-----KDGKIAAIKVLSAESR-QGVKEFLTEIQVISEIEHENL 102
I +GEG FG V R G+ A+K L ES + + EI+++ + HEN+
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 73
Query: 103 VKLYGCCVE--GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
VK G C E GN L+ +L + SL + L + + + + + + + I +G+
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 128
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTR--VAGTIGYLA 218
+L +HRD+ A N+L++ + KI DFGL K I + + + + + A
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 185
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVS 245
PE ++ + +D++SFGV L E+++
Sbjct: 186 PECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 134/302 (44%), Gaps = 36/302 (11%)
Query: 33 LYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD-------GKIAAIKVLSAESRQGVK 85
+Y E ++ + + + ++G+G FG VY+G +D ++A V + S +
Sbjct: 6 VYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----GGHHYSNI 141
EFL E V+ ++V+L G +G ++V + + L L ++
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 142 QFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-P 200
+ + ++ IA G+A+L+ + +HR++ A N ++ D T KI DFG+ + I
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
+ + + ++APE G T +D++SFGV+L EI S
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------------- 227
Query: 261 LLERTWD-LYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
L E+ + L + L ++D G D + C R + +C Q P +RP+ +V
Sbjct: 228 LAEQPYQGLSNEQVLKFVMD---GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284
Query: 318 ML 319
+L
Sbjct: 285 LL 286
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 51 KIGEGGFGSVYKG--RLKDGKI-AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
++G G FGSV +G R++ +I AIKVL + + +E + E Q++ ++++ +V+L
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHH--YSNIQFSWRTRSRICIGIARGLAFLHE 164
G C + +LV L + L+G SN+ + + ++ G+ +L E
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-------AELLHQVSMGMKYLEE 128
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYA 222
+ + +HRD+ A N+LL KISDFGL+K + A+ ++ + R AG + + APE
Sbjct: 129 K---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ + ++D++S+GV + E +S
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALS 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 32/214 (14%)
Query: 46 FSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQG--VKEFLTEIQVISEIEHENL 102
++ + +G+G FG V K + + + A+KV++ S + L E++++ +++H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 103 VKLYGCCVEGNHRILVYNYLENNS---LAQTLIGGGHHYSNI----QFSWRTRSRICIGI 155
+KL+ LE++S + L GG + I +FS +RI +
Sbjct: 84 MKLF-------------EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAG 212
G+ ++H + +I+HRD+K NILL+ KD KI DFGL+ N T + R+ G
Sbjct: 131 FSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-G 185
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T Y+APE +RG K D++S GV+L ++SG
Sbjct: 186 TAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 32/214 (14%)
Query: 46 FSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQG--VKEFLTEIQVISEIEHENL 102
++ + +G+G FG V K + + + A+KV++ S + L E++++ +++H N+
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 103 VKLYGCCVEGNHRILVYNYLENNS---LAQTLIGGGHHYSNI----QFSWRTRSRICIGI 155
+KL+ LE++S + L GG + I +FS +RI +
Sbjct: 84 MKLF-------------EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAG 212
G+ ++H + +I+HRD+K NILL+ KD KI DFGL+ N T + R+ G
Sbjct: 131 FSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-G 185
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T Y+APE +RG K D++S GV+L ++SG
Sbjct: 186 TAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 49 INKIGEGGFGSVYKGRL-----KDGKIAAIKVLSAESR-QGVKEFLTEIQVISEIEHENL 102
I +GEG FG V R G+ A+K L ES + + EI+++ + HEN+
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI 85
Query: 103 VKLYGCCVE--GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
VK G C E GN L+ +L + SL + L + + + + + + + I +G+
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMD 140
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTR--VAGTIGYLA 218
+L +HRD+ A N+L++ + KI DFGL K I + + + + + A
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYA 197
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVS 245
PE ++ + +D++SFGV L E+++
Sbjct: 198 PECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 112
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 168
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 120
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 121 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 176
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 177 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 112
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 168
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 113
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 112
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 168
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 113
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 13/211 (6%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKV--LSAESRQGVKEFLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K L E+ + EI ++ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H N+VKL N LV+ +L + +T + + + +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKTFMDAS---ALTGIPLPLIKSYLFQLLQG 118
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
LAF H ++HRD+K N+L++ + K++DFGLA+ + V T+ Y A
Sbjct: 119 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 174
Query: 219 PEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
PE + + A DI+S G + E+V+ R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVIS 95
DDF + +G+G FG+VY R K K I A+KVL S ++GV+ L EI++ S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+ H N++++Y + L+ + L + L G +F + + +
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEEL 123
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
A L + HE +IHRDIK N+L+ KI+DFG + P+ + GT+
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLD 177
Query: 216 YLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
YL PE I G+ K D++ GVL E + G
Sbjct: 178 YLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTE 90
E +A + + ++G+G FG VY+G K + ++A V A S + EFL E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF----SWR 146
V+ E ++V+L G +G +++ + L L N S
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTH 205
++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + + +
Sbjct: 130 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 186
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERT 265
+ + +++PE G T +D++SFGV+L EI + L E+
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQP 231
Query: 266 WDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
+ +++ V G D + C ++ +C Q PK+RPS ++
Sbjct: 232 YQGLSNEQVLRFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 34/293 (11%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLK-------DGKIAAIKVLSAESRQGVKEFLTE 90
E +A + + ++G+G FG VY+G K + ++A V A S + EFL E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 91 IQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF----SWR 146
V+ E ++V+L G +G +++ + L L N S
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-LIPANMTH 205
++ IA G+A+L+ +HRD+ A N ++ +D T KI DFG+ + + +
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERT 265
+ + +++PE G T +D++SFGV+L EI + L E+
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT---------------LAEQP 227
Query: 266 WDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVV 316
+ +++ V G D + C ++ +C Q PK+RPS ++
Sbjct: 228 YQGLSNEQVLRFVME--GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKDG-----KIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKK 208
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 113
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKV--LSAESRQGVKEFLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K L E+ + EI ++ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 111
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 114
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 113
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 112/221 (50%), Gaps = 24/221 (10%)
Query: 49 INKIGEGGFGSVYKG-RLKDGKIA----AIKVLSAESRQGVK-EFLTEIQVISEIEHENL 102
+ +G G FG+VYKG + +G+ AIK+L+ + EF+ E +++ ++H +L
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 103 VKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGIARG 158
V+L G C+ + LV + + L + + H NI +W C+ IA+G
Sbjct: 103 VRLLGVCLSPTIQ-LVTQLMPHGCLLEYV---HEHKDNIGSQLLLNW------CVQIAKG 152
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L E ++HRD+ A N+L+ KI+DFGLA+L+ + + I ++
Sbjct: 153 MMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM 209
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEE 258
A E + T ++D++S+GV + E+++ +PT E
Sbjct: 210 ALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE 250
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 115
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 116 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 171
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKV--LSAESRQGVKEFLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K L E+ + EI ++ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 113
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKV--LSAESRQGVKEFLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K L E+ + EI ++ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 111
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 112
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 21/208 (10%)
Query: 49 INKIGEGGFGSVYKGRL-----KDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
I+++G+G FGSV R G + A+K L ++F EIQ++ + + +V
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIV 71
Query: 104 KLYGCCV-EGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFS--WRTRSRICIGIARGL 159
K G G + LV YL + L L H + + S S+IC +G+
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQIC----KGM 124
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYL 217
+L +HRD+ A NIL++ + KI+DFGLAKL+P + R G I +
Sbjct: 125 EYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY 181
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
APE +R++D++SFGV+L E+ +
Sbjct: 182 APESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKV--LSAESRQGVKEFLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K L E+ + EI ++ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 111
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 52 IGEGGFGSVYK----GRLKDGKI--AAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G K+ + A+K+L + + KE ++E++++S + +HEN+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTL--------IGGGHHYSNIQFSWRTRSRICIGI 155
L G C G +++ Y L L +N S R +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-TI 214
A+G+AFL + + IHRD+ A N+LL KI DFGLA+ I + ++ A +
Sbjct: 174 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 215 GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
++APE T ++D++S+G+LL EI S
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 114
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKV--LSAESRQGVKEFLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K L E+ + EI ++ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 112
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 113 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 168
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG---------IPLPLIKSYLFQ 111
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 112
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+ Y
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 168
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQ 111
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 112 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 167
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKV--LSAESRQGVKEFLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K L E+ + EI ++ E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 112
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+ Y
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 168
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 114
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+ Y
Sbjct: 115 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWY 170
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 13/209 (6%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VKL N LV+ ++ + +T + + + +GLA
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD--LKTFMDAS---ALTGIPLPLIKSYLFQLLQGLA 116
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
F H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y APE
Sbjct: 117 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 172
Query: 221 YAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
+ + A DI+S G + E+V+ R
Sbjct: 173 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 52 IGEGGFGSVYK----GRLKDGKI--AAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G K+ + A+K+L + + KE ++E++++S + +HEN+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTL----------IGGGHHYSNIQFSWRTRSRICI 153
L G C G +++ Y L L H Q S R
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG- 212
+A+G+AFL + + IHRD+ A N+LL KI DFGLA+ I + ++ A
Sbjct: 174 QVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++S+G+LL EI S
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H N+VKL N LV+ +L S+ + I + +G
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLP--LIKSYLFQLLQG 116
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
LAF H ++HRD+K N+L++ + K++DFGLA+ + V T+ Y A
Sbjct: 117 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 172
Query: 219 PEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
PE + + A DI+S G + E+V+ R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 13/211 (6%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H N+VKL N LV+ +L S+ + I + +G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLP--LIKSYLFQLLQG 118
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
LAF H ++HRD+K N+L++ + K++DFGLA+ + V T+ Y A
Sbjct: 119 LAFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRA 174
Query: 219 PEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
PE + + A DI+S G + E+V+ R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 16/204 (7%)
Query: 49 INKIGEGGFGSVYKG-RLKDGK----IAAIKVLSAE-SRQGVKEFLTEIQVISEIEHENL 102
+ +G G FG+VYKG + DG+ AIKVL S + KE L E V++ + +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 103 VKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFL 162
+L G C+ +++ L G S +W C+ IA+G+++L
Sbjct: 82 SRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYL 135
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYLAPEY 221
E+VR ++HRD+ A N+L+ KI+DFGLA+L+ + T I ++A E
Sbjct: 136 -EDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 222 AIRGQVTRKADIYSFGVLLVEIVS 245
+R + T ++D++S+GV + E+++
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 113
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GL+F H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 114 QGLSFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ +++ ++ L H NI + C+ IA+G
Sbjct: 77 NPHVCRLLGICLTSTVQLI----MQLMPFGXLLDYVREHKDNIGSQYLLNW--CVQIAKG 130
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDGKIAAIKV--LSAESRQGVKEFLTEIQVISEIEHEN 101
+ + + K+GEG +G VYK + G+I A+K L AE + EI ++ E+ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI-GIARGLA 160
+V L LV+ ++E + L + L + + +Q S + +I + + RG+A
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKD-LKKVL---DENKTGLQDS---QIKIYLYQLLRGVA 133
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
H+ I+HRD+K N+L++ D K++DFGLA+ + + V T+ Y AP+
Sbjct: 134 HCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPD 189
Query: 221 YAI-RGQVTRKADIYSFGVLLVEIVSGR 247
+ + + DI+S G + E+++G+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDGKIAAIKV--LSAESRQGVKEFLTEIQVISEIEHEN 101
+ + + K+GEG +G VYK + G+I A+K L AE + EI ++ E+ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI-GIARGLA 160
+V L LV+ ++E + L + L + + +Q S + +I + + RG+A
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKD-LKKVL---DENKTGLQDS---QIKIYLYQLLRGVA 133
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
H+ I+HRD+K N+L++ D K++DFGLA+ + + V T+ Y AP+
Sbjct: 134 HCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPD 189
Query: 221 YAI-RGQVTRKADIYSFGVLLVEIVSGR 247
+ + + DI+S G + E+++G+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE---SRQGVKEFLTEIQV 93
++ + +DF +G+G FG V+ K + AIK L + V+ + E +V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 94 IS-EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+S EH L ++ + V YL L H S +F +
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMY------HIQSCHKFDLSRATFYA 125
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANM--THVSTRV 210
I GL FLH + I++RD+K NILLDKD KI+DFG+ K NM +
Sbjct: 126 AEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEF 179
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
GT Y+APE + + D +SFGVLL E++ G+
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 18/208 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEIEH 99
+DF +G+G FG+VY R + K I A+KVL + + GV+ L E+++ S + H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
N+++LYG + L+ Y ++ + L +F + + +A L
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS------RFDEQRTATYITELANAL 125
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
++ H + +IHRDIK N+LL + KI+DFG + P++ + GT+ YL P
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPP 179
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E I G++ K D++S GVL E + G
Sbjct: 180 E-MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 107/212 (50%), Gaps = 24/212 (11%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGK-----IAAIKVLSAESRQGVKEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ +A +++ A S + KE L E V++ ++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIG 154
+ ++ +L G C+ + L+ + L + H NI +W C+
Sbjct: 110 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW------CVQ 159
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT- 213
IA+G+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A
Sbjct: 160 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I ++A E + T ++D++S+GV + E+++
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 30 NVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKE 86
N L + DDF +G+G FG+VY R K K I A+KVL S ++GV+
Sbjct: 1 NTALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEH 60
Query: 87 FLT-EIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSW 145
L EI++ S + H N++++Y + L+ + L + L G +F
Sbjct: 61 QLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG------RFDE 114
Query: 146 RTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH 205
+ + +A L + HE +IHRDIK N+L+ KI+DFG + P+
Sbjct: 115 QRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 169
Query: 206 VSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
+ GT+ YL PE I G+ K D++ GVL E + G
Sbjct: 170 -RRXMCGTLDYLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG---------IPLPLIKSYLFQ 113
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 114 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 169
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 103/219 (47%), Gaps = 30/219 (13%)
Query: 49 INKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
+ +IG+G +G V+ G+ + K+A + E +E TEI + HEN++
Sbjct: 42 VKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAA 99
Query: 109 CVEGN----HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
++G L+ +Y EN SL L + ++ ++ GL LH
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL-------KSTTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 165 EV-----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV----STRVAGTIG 215
E+ +P I HRD+K+ NIL+ K+ T I+D GLA ++ V +TRV GT
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKR 211
Query: 216 YLAPEYAIRG------QVTRKADIYSFGVLLVEIVSGRC 248
Y+ PE Q AD+YSFG++L E V+ RC
Sbjct: 212 YMPPEVLDESLNRNHFQSYIMADMYSFGLILWE-VARRC 249
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLS---AESRQGVKEFLTEIQVIS 95
+I +D + +G+G FG V + K G+ A+KV+S + + + L E+Q++
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+++H N++KLY + + LV L +I S +FS +RI +
Sbjct: 82 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII------SRKRFSEVDAARIIRQV 135
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAG 212
G+ ++H + I+HRD+K N+LL+ KD +I DFGL+ A+ + ++ G
Sbjct: 136 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-G 190
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T Y+APE + G K D++S GV+L ++SG
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K + ++ +GV + EI ++ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +L + A L G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG---------IPLPLIKSYLFQ 114
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 110/203 (54%), Gaps = 19/203 (9%)
Query: 51 KIGEGGFGSVYKG--RLKDGKI-AAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLY 106
++G G FGSV +G R++ +I AIKVL + + +E + E Q++ ++++ +V+L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHH--YSNIQFSWRTRSRICIGIARGLAFLHE 164
G C + +LV L + L+G SN+ + + ++ G+ +L E
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-------AELLHQVSMGMKYLEE 454
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG--TIGYLAPEYA 222
+ + +HR++ A N+LL KISDFGL+K + A+ ++ + R AG + + APE
Sbjct: 455 K---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 223 IRGQVTRKADIYSFGVLLVEIVS 245
+ + ++D++S+GV + E +S
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKDG-----KIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 193
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 249
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 52 IGEGGFGSVYK----GRLKDGKI--AAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G K+ + A+K+L + + KE ++E++++S + +HEN+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTL--------IGGGHHYSNIQFSWRTRSRICIGI 155
L G C G +++ Y L L +N S R +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-TI 214
A+G+AFL + + IHRD+ A N+LL KI DFGLA+ I + ++ A +
Sbjct: 174 AQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 215 GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
++APE T ++D++S+G+LL EI S
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKDG-----KIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKDG-----KIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 197
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKDG-----KIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 201
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 257
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLS---AESRQGVKEFLTEIQVIS 95
+I +D + +G+G FG V + K G+ A+KV+S + + + L E+Q++
Sbjct: 28 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+++H N++KLY + + LV L +I S +FS +RI +
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII------SRKRFSEVDAARIIRQV 141
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAG 212
G+ ++H + I+HRD+K N+LL+ KD +I DFGL+ A+ + ++ G
Sbjct: 142 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-G 196
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T Y+APE + G K D++S GV+L ++SG
Sbjct: 197 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKDG-----KIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 200
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 256
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKDG-----KIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKDG-----KIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 264
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 25/241 (10%)
Query: 24 EFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRL------KDGKIAAIKVLS 77
E I+ K KE+S++ F + ++GE FG VYKG L + + AIK L
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK 65
Query: 78 AESRQGVKE-FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGH 136
++ ++E F E + + ++H N+V L G + ++++Y + L + L+
Sbjct: 66 DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSP 125
Query: 137 HYSNIQFSWRTRS-----------RICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKD 185
H S++ + R+ + IA G+ +L H++H+D+ N+L+
Sbjct: 126 H-SDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDK 181
Query: 186 LTPKISDFGLAK-LIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIV 244
L KISD GL + + A+ + I ++APE + G+ + +DI+S+GV+L E+
Sbjct: 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVF 241
Query: 245 S 245
S
Sbjct: 242 S 242
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 66
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 120
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 121 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIG 154
+ ++ +L G C+ + L+ + L + H NI +W C+
Sbjct: 86 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW------CVQ 135
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT- 213
IA+G+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A
Sbjct: 136 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I ++A E + T ++D++S+GV + E+++
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 79 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 132
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ +++ ++ L H NI + C+ IA+G
Sbjct: 76 NPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKG 129
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 67
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 121
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 122 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ +++ ++ L H NI + C+ IA+G
Sbjct: 77 NPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKG 130
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 65
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 119
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 120 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 64
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 118
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 119 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ +++ + L H NI + C+ IA+G
Sbjct: 76 NPHVCRLLGICLTSTVQLIT----QLMPFGXLLDYVREHKDNIGSQYLLNW--CVQIAKG 129
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+ + ++ +GV + EI ++ E+ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 113
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 114 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 169
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESR-QGVKE-FLTEIQVISEIEHE 100
++F + KIGEG +G VYK R K G++ A+ + ++ +GV + EI ++ E+ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N+VKL N LV+ +L + A L G +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG---------IPLPLIKSYLFQLL 112
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
+GLAF H ++HRD+K N+L++ + K++DFGLA+ + + V T+ Y
Sbjct: 113 QGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWY 168
Query: 217 LAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
APE + + A DI+S G + E+V+ R
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 42 ATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKV--LSAESRQGVKEFLTEIQVISEIE 98
+ ++F + KIGEG +G VYK R K G++ A+K L E+ + EI ++ E+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTRSRICIG 154
H N+VKL N LV+ +++ + A L G
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG---------IPLPLIKSYLFQ 114
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+ +GLAF H ++HRD+K N+L++ + K++DFGLA+ + V T+
Sbjct: 115 LLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TL 170
Query: 215 GYLAPEYAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
Y APE + + A DI+S G + E+V+ R
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 131
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLS---AESRQGVKEFLTEIQVIS 95
+I +D + +G+G FG V + K G+ A+KV+S + + + L E+Q++
Sbjct: 45 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+++H N++KLY + + LV L +I S +FS +RI +
Sbjct: 105 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII------SRKRFSEVDAARIIRQV 158
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAG 212
G+ ++H + I+HRD+K N+LL+ KD +I DFGL+ A+ + ++ G
Sbjct: 159 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-G 213
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T Y+APE + G K D++S GV+L ++SG
Sbjct: 214 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 80 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLN--WCVQIAKG 133
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 132
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG------SFDETCTRFYTAEIVS 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE ++ +D+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 110/214 (51%), Gaps = 19/214 (8%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLS---AESRQGVKEFLTEIQVIS 95
+I +D + +G+G FG V + K G+ A+KV+S + + + L E+Q++
Sbjct: 46 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+++H N++KLY + + LV L +I S +FS +RI +
Sbjct: 106 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII------SRKRFSEVDAARIIRQV 159
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAG 212
G+ ++H + I+HRD+K N+LL+ KD +I DFGL+ A+ + ++ G
Sbjct: 160 LSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-G 214
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T Y+APE + G K D++S GV+L ++SG
Sbjct: 215 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 70 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 123
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 101 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLN--WCVQIAKG 154
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRL--KDGKIA--AIKVLSAE---SRQGVKEFLTEIQV 93
I D + K+G+G FG V +G GK A+K L + + + +F+ E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ ++H NL++LYG + +++ + L + GH F T SR +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYAV 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+A G+ +L + IHRD+ A N+LL KI DFGL + +P N H +
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 175
Query: 214 I--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ + APE + +D + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ D+F I +G+G FG V R+K+ G + A+KVL + V+ +TE +++S
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR---TRSRICI 153
+ + CC + R+ + GG +IQ S R R+R
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLF---------FVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 154 G-IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
I L FLH++ II+RD+K N+LLD + K++DFG+ K N +T G
Sbjct: 131 AEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCG 186
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T Y+APE D ++ GVLL E++ G
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 52 IGEGGFGSVYK----GRLKD-----GKIAAIKVLSAESRQGVKEFLTEIQVISEI-EHEN 101
+GEG FG V G KD K+A + S + + + + ++E++++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIG----------GGHHYSNIQFSWRTRSRI 151
++ L G C + ++ Y +L + L H Q S +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ARG+ +L + IHRD+ A N+L+ +D KI+DFGLA+ ++ H+
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 249
Query: 212 GTIG-----YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLL 262
T G ++APE T ++D++SFGVLL EI + + +P EE + L
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL 305
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 129
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 31/225 (13%)
Query: 45 DFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENL 102
DF PI +G GGFG V++ + K D AIK + +R+ +E + E++ ++++EH +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 103 VKLYGCCVEGN-------HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR----- 150
V+ + +E N VY Y++ + + + N + + R R
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKD---WMNGRCTIEERERSVCLH 122
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK-----------LI 199
I + IA + FLH + ++HRD+K SNI D K+ DFGL L
Sbjct: 123 IFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 200 PANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIV 244
P T GT Y++PE + K DI+S G++L E++
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 136
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 132
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRL--KDGKIA--AIKVLSAE---SRQGVKEFLTEIQV 93
I D + K+G+G FG V +G GK A+K L + + + +F+ E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ ++H NL++LYG + +++ + L + GH F T SR +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYAV 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+A G+ +L + IHRD+ A N+LL KI DFGL + +P N H +
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 214 I--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ + APE + +D + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 35/283 (12%)
Query: 52 IGEGGFGSVYKGRLKDGKI---AAIKVLSA-ESRQGVKEFLTEIQVISEI-EHENLVKLY 106
IGEG FG V K R+K + AAIK + S+ ++F E++V+ ++ H N++ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS----------RICIGIA 156
G C + L Y + +L L ++ F+ + +A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
RG+ +L ++ IHRD+ A NIL+ ++ KI+DFGL++ + R+ + +
Sbjct: 153 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP--VRW 207
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+A E T +D++S+GVLL EIVS + E LYE+
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LYEKLPQGY 258
Query: 277 LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
++ LN D + + R C ++ P RPS + ++ L
Sbjct: 259 RLEKPLNCDDEVYDLMR------QCWREKPYERPSFAQILVSL 295
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFL-TEIQVISEIEHENLVKLYGCC 109
+G G F V K K+ AIK ++ E+ +G + + EI V+ +I+H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
G H L+ + L ++ G ++ R SR+ + + +LH+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYLHD---LG 136
Query: 170 IIHRDIKASNIL---LDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ 226
I+HRD+K N+L LD+D ISDFGL+K+ + V + GT GY+APE +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 227 VTRKADIYSFGVLLVEIVSG 246
++ D +S GV+ ++ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 79 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 132
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 35/283 (12%)
Query: 52 IGEGGFGSVYKGRLKDGKI---AAIKVLSA-ESRQGVKEFLTEIQVISEI-EHENLVKLY 106
IGEG FG V K R+K + AAIK + S+ ++F E++V+ ++ H N++ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS----------RICIGIA 156
G C + L Y + +L L ++ F+ + +A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
RG+ +L ++ IHRD+ A NIL+ ++ KI+DFGL++ + R+ + +
Sbjct: 143 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP--VRW 197
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+A E T +D++S+GVLL EIVS + E LYE+
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LYEKLPQGY 248
Query: 277 LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
++ LN D + + R C ++ P RPS + ++ L
Sbjct: 249 RLEKPLNCDDEVYDLMR------QCWREKPYERPSFAQILVSL 285
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 71
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 125
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 126 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 131
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 129
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 18/212 (8%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVIS 95
DDF +G+G FG+VY R K K I A+KVL S ++GV+ L EI++ S
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+ H N++++Y + L+ + L + L G +F + + +
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEEL 123
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
A L + HE +IHRDIK N+L+ KI+DFG + P+ + GT+
Sbjct: 124 ADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---RRXMCGTLD 177
Query: 216 YLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
YL PE I G+ K D++ GVL E + G
Sbjct: 178 YLPPE-MIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 140
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRL--KDGKIA--AIKVLSAE---SRQGVKEFLTEIQV 93
I D + K+G+G FG V +G GK A+K L + + + +F+ E+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ ++H NL++LYG + +++ + L + GH F T SR +
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYAV 122
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+A G+ +L + IHRD+ A N+LL KI DFGL + +P N H +
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 214 I--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ + APE + +D + FGV L E+ +
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRL--KDGKIA--AIKVLSAE---SRQGVKEFLTEIQV 93
I D + K+G+G FG V +G GK A+K L + + + +F+ E+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ ++H NL++LYG + +++ + L + GH F T SR +
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYAV 118
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+A G+ +L + IHRD+ A N+LL KI DFGL + +P N H +
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 175
Query: 214 I--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ + APE + +D + FGV L E+ +
Sbjct: 176 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 82 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLN--WCVQIAKG 135
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 140
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRL--KDGKIA--AIKVLSAE---SRQGVKEFLTEIQV 93
I D + K+G+G FG V +G GK A+K L + + + +F+ E+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ ++H NL++LYG + +++ + L + GH F T SR +
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYAV 128
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+A G+ +L + IHRD+ A N+LL KI DFGL + +P N H +
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRK 185
Query: 214 I--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ + APE + +D + FGV L E+ +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFL-TEIQVISEIEHENLVKLYGCC 109
+G G F V K K+ AIK ++ E+ +G + + EI V+ +I+H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
G H L+ + L ++ G ++ R SR+ + + +LH+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYLHD---LG 136
Query: 170 IIHRDIKASNIL---LDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ 226
I+HRD+K N+L LD+D ISDFGL+K+ + V + GT GY+APE +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 227 VTRKADIYSFGVLLVEIVSG 246
++ D +S GV+ ++ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRL--KDGKIA--AIKVLSAE---SRQGVKEFLTEIQV 93
I D + K+G+G FG V +G GK A+K L + + + +F+ E+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ ++H NL++LYG + +++ + L + GH F T SR +
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYAV 122
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+A G+ +L + IHRD+ A N+LL KI DFGL + +P N H +
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 179
Query: 214 I--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ + APE + +D + FGV L E+ +
Sbjct: 180 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 30/274 (10%)
Query: 51 KIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENLVKLYGC 108
+IG G FG V+ GRL+ D + A+K +K +FL E +++ + H N+V+L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRP 168
C + +V ++ L G + +T ++ A G+ +L +
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLESKC-- 233
Query: 169 HIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYLAPEYAIRGQV 227
IHRD+ A N L+ + KISDFG+++ + S + + + APE G+
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 228 TRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFD 287
+ ++D++SFG+LL E S + L ++ RE + G
Sbjct: 293 SSESDVWSFGILLWETFSLGASPYPNLSNQQT------------REFV-----EKGGRLP 335
Query: 288 AEEACRFLKVGLL--CTQDTPKLRPSMSTVVQML 319
E C L+ C P RPS ST+ Q L
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 19/217 (8%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE---SRQGVKEFLTEIQV 93
++ + +DF +G+G FG V+ K + AIK L + V+ + E +V
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 94 IS-EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+S EH L ++ + V YL L H S +F +
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMY------HIQSCHKFDLSRATFYA 124
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANM--THVSTRV 210
I GL FLH + I++RD+K NILLDKD KI+DFG+ K NM +
Sbjct: 125 AEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXF 178
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
GT Y+APE + + D +SFGVLL E++ G+
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 113/228 (49%), Gaps = 25/228 (10%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRL------KDGKIAAIKVLSAESRQGVKE-FLT 89
KE+S++ F + ++GE FG VYKG L + + AIK L ++ ++E F
Sbjct: 4 KEISLSAVRF--MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 61
Query: 90 EIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS 149
E + + ++H N+V L G + ++++Y + L + L+ H S++ + R+
Sbjct: 62 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPH-SDVGSTDDDRT 120
Query: 150 -----------RICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK- 197
+ IA G+ +L H++H+D+ N+L+ L KISD GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 198 LIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ A+ + I ++APE + G+ + +DI+S+GV+L E+ S
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFL-TEIQVISEIEHENLVKLYGCC 109
+G G F V K K+ AIK ++ E+ +G + + EI V+ +I+H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
G H L+ + L ++ G ++ R SR+ + + +LH+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYLHD---LG 136
Query: 170 IIHRDIKASNIL---LDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ 226
I+HRD+K N+L LD+D ISDFGL+K+ + V + GT GY+APE +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 227 VTRKADIYSFGVLLVEIVSG 246
++ D +S GV+ ++ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 108/235 (45%), Gaps = 29/235 (12%)
Query: 52 IGEGGFGSVYK----GRLKDGKI--AAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V G K G A+K+L ++ +E ++E+++++++ HEN+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI------------ 151
L G C L++ Y L L +S + + + R+
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 152 ---CIG--IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV 206
C +A+G+ FL +HRD+ A N+L+ KI DFGLA+ I ++ +V
Sbjct: 173 DLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 207 STRVAGT-IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
A + ++APE G T K+D++S+G+LL EI S N +P + +
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANF 284
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 141
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 18/214 (8%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRL--KDGKIA--AIKVLSAE---SRQGVKEFLTEIQV 93
I D + K+G+G FG V +G GK A+K L + + + +F+ E+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ ++H NL++LYG + +++ + L + GH F T SR +
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH------FLLGTLSRYAV 128
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
+A G+ +L + IHRD+ A N+LL KI DFGL + +P N H +
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRK 185
Query: 214 I--GYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ + APE + +D + FGV L E+ +
Sbjct: 186 VPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 105/209 (50%), Gaps = 15/209 (7%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAES--RQG-VKEFLTEIQVISEIEH 99
+DF N +G+G F VY+ + G AIK++ ++ + G V+ E+++ +++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
++++LY + N+ LV N + + L FS I G+
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-----PFSENEARHFMHQIITGM 125
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLA 218
+LH I+HRD+ SN+LL +++ KI+DFGLA +L + H + + GT Y++
Sbjct: 126 LYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYIS 180
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
PE A R ++D++S G + ++ GR
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 141
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 144
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 144
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 51 KIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQ-GVKEFLTEIQVISEIEHENLVKLYGC 108
K+G G FG V+ + + IK ++ + Q +++ EI+V+ ++H N++K++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRP 168
+ ++ +V E L + ++ S + + + LA+ H +
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSA--QARGKALSEGYVAELMKQMMNALAYFHSQ--- 143
Query: 169 HIIHRDIKASNILLDKDLTP----KISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
H++H+D+K NIL +D +P KI DFGLA+L ++ ST AGT Y+APE +
Sbjct: 144 HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPE-VFK 199
Query: 225 GQVTRKADIYSFGVLLVEIVSG 246
VT K DI+S GV++ +++G
Sbjct: 200 RDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 30/274 (10%)
Query: 51 KIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENLVKLYGC 108
+IG G FG V+ GRL+ D + A+K +K +FL E +++ + H N+V+L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRP 168
C + +V ++ L G + +T ++ A G+ +L +
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLESKC-- 233
Query: 169 HIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYLAPEYAIRGQV 227
IHRD+ A N L+ + KISDFG+++ + S + + + APE G+
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 228 TRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELILLVDTSLNGDFD 287
+ ++D++SFG+LL E S + L ++ RE + G
Sbjct: 293 SSESDVWSFGILLWETFSLGASPYPNLSNQQT------------REFV-----EKGGRLP 335
Query: 288 AEEACRFLKVGLL--CTQDTPKLRPSMSTVVQML 319
E C L+ C P RPS ST+ Q L
Sbjct: 336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQEL 369
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 141
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 92
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 146
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 147 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA G
Sbjct: 73 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAEG 126
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 22/214 (10%)
Query: 46 FSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE-NLV 103
F + +G G +G VYKGR +K G++AAIKV+ + +E EI ++ + H N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 104 KLYGCCVEGN------HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
YG ++ N LV + S+ + + ++ W + IC I R
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWI--AYICREILR 140
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
GL+ LH+ +IHRDIK N+LL ++ K+ DFG++ + + +T + GT ++
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWM 196
Query: 218 APEYAI-----RGQVTRKADIYSFGVLLVEIVSG 246
APE K+D++S G+ +E+ G
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F +V R L + AIK+L E R +KE ++T E V+S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ + IGEG +G V ++ ++A K+ E + + L EIQ++ HEN++
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 104 K----LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
L +E + + L L + L SN + I RGL
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLL--KSQQLSNDHICY-----FLYQILRGL 157
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+L++ KI DFGLA++ H T T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 135
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 136 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 142
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 143 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 199
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 143
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 144 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 200
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 134
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 135 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 191
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 141
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 135
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 136 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 192
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 141
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 141
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KCQHLSNDHICY-----FLYQILRGL 141
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 141
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 198
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 35/283 (12%)
Query: 52 IGEGGFGSVYKGRLKDGKI---AAIKVLSA-ESRQGVKEFLTEIQVISEI-EHENLVKLY 106
IGEG FG V K R+K + AAIK + S+ ++F E++V+ ++ H N++ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS----------RICIGIA 156
G C + L Y + +L L ++ F+ + +A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
RG+ +L ++ IHR++ A NIL+ ++ KI+DFGL++ + R+ + +
Sbjct: 150 RGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP--VRW 204
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+A E T +D++S+GVLL EIVS + E LYE+
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---------LYEKLPQGY 255
Query: 277 LVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
++ LN D + + R C ++ P RPS + ++ L
Sbjct: 256 RLEKPLNCDDEVYDLMR------QCWREKPYERPSFAQILVSL 292
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + + HE
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 16/222 (7%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLK--DGKIA--AIKVLSAE--SRQGVKEFLTE 90
+++ I F+ +G+G FGSV + +LK DG A+K+L A+ + ++EFL E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 91 IQVISEIEHENLVKLYGCCVEGNHR------ILVYNYLENNSLAQTLIGGGHHYSNIQFS 144
+ E +H ++ KL G + + +++ ++++ L L+ +
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 145 WRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA-KLIPANM 203
+T R + IA G+ +L + IHRD+ A N +L +D+T ++DFGL+ K+ +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 204 THVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ +LA E T +D+++FGV + EI++
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 92/214 (42%), Gaps = 16/214 (7%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI- 97
S+AT + P+ +IG G +G+VYK R G A+K + + G L I + E+
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLP-ISTVREVA 63
Query: 98 --------EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS 149
EH N+V+L C + L + Q L T
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 123
Query: 150 RICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTR 209
+ RGL FLH I+HRD+K NIL+ T K++DFGLA++ M T
Sbjct: 124 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTP 178
Query: 210 VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEI 243
V T+ Y APE ++ D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLS---AESRQGVKEFLTEIQVIS 95
+I +D + +G+G FG V + K G+ A+KV+S + + + L E+Q++
Sbjct: 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
+++H N+ KLY + + LV L +I S +FS +RI +
Sbjct: 82 QLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII------SRKRFSEVDAARIIRQV 135
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAG 212
G+ + H + I+HRD+K N+LL+ KD +I DFGL+ A+ G
Sbjct: 136 LSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--IG 190
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T Y+APE + G K D++S GV+L ++SG
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ +++ ++ L H NI + C+ IA+G
Sbjct: 80 NPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLNW--CVQIAKG 133
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFG AKL+ A I ++
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKE----FLT-EIQVISEI 97
+DF +GEG F + R L + AIK+L E R +KE ++T E V+S +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H VKLY + +Y +N L + + G F I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVS 141
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
L +LH + IIHRD+K NILL++D+ +I+DFG AK++ P + + GT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++PE + +D+++ G ++ ++V+G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I + G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 83 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 136
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ +++ ++ L H NI + C+ IA+G
Sbjct: 78 NPHVCRLLGICLTSTVQLI----MQLMPFGCLLDYVREHKDNIGSQYLLN--WCVQIAKG 131
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFG AKL+ A I ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQY 260
E R + D++S G++L +++G + + ++Y
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I + G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 129
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A I ++
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 117
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 118 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 137
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
+ ++ +L G C+ + L+ + L + H NI + C+ IA+G
Sbjct: 78 NPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYV---REHKDNIGSQYLLNW--CVQIAKG 131
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYL 217
+ +L + ++HRD+ A N+L+ KI+DFG AKL+ A I ++
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T ++D++S+GV + E+++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFL-TEIQVISEIEHENLVKLYGCC 109
+G G F V K K+ AIK ++ ++ +G + + EI V+ +I+H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
G H L+ + L ++ G ++ R SR+ + + +LH+
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGF------YTERDASRLIFQVLDAVKYLHD---LG 136
Query: 170 IIHRDIKASNIL---LDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ 226
I+HRD+K N+L LD+D ISDFGL+K+ + V + GT GY+APE +
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 227 VTRKADIYSFGVLLVEIVSG 246
++ D +S GV+ ++ G
Sbjct: 195 YSKAVDCWSIGVIAYILLCG 214
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI---GIARGLA 160
+ R +++ L L+G Y ++ + IC I RGL
Sbjct: 105 GINDII-----RAPTIEQMKDVYLVTHLMGADL-YKLLKTQHLSNDHICYFLYQILRGLK 158
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYLA 218
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y A
Sbjct: 159 YIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 219 PEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
PE + + T+ DI+S G +L E++S R
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIG 154
+ ++ +L G C+ + L+ + L + H NI +W C+
Sbjct: 78 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW------CVQ 127
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT- 213
IA+G+ +L + ++HRD+ A N+L+ KI+DFG AKL+ A
Sbjct: 128 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I ++A E + T ++D++S+GV + E+++
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 137
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I + G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIG 154
+ ++ +L G C+ + L+ + L + H NI +W C+
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW------CVQ 132
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT- 213
IA+G+ +L + ++HRD+ A N+L+ KI+DFGLAKL+ A
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I ++A E + T ++D++S+GV + E+++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 145
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 146 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 202
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 137
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 52 IGEGGFGSVYK----GRLKDGKI--AAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G K+ + A+K+L + + KE ++E++++S + +HEN+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGIARGL 159
L G C G +++ Y L L + + R +A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-TIGYLA 218
AFL + + IHRD+ A N+LL KI DFGLA+ I + ++ A + ++A
Sbjct: 174 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVS 245
PE T ++D++S+G+LL EI S
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 137
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIG 154
+ ++ +L G C+ + L+ + L + H NI +W C+
Sbjct: 76 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW------CVQ 125
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT- 213
IA+G+ +L + ++HRD+ A N+L+ KI+DFG AKL+ A
Sbjct: 126 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I ++A E + T ++D++S+GV + E+++
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 139
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 106/207 (51%), Gaps = 18/207 (8%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDGKIA-AIKVL--SAESRQGVKEFLTEIQVISEIEHENL 102
+ + K+G G +G V R K + AIK++ ++ S + L E+ V+ ++H N+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 103 VKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFL 162
+KLY + + LV + L +I ++F+ + I + G+ +L
Sbjct: 99 MKLYDFFEDKRNYYLVMECYKGGELFDEII------HRMKFNEVDAAVIIKQVLSGVTYL 152
Query: 163 HEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
H + +I+HRD+K N+LL +KD KI DFGL+ + N + R+ GT Y+AP
Sbjct: 153 H---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERL-GTAYYIAP 207
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSG 246
E +R + K D++S GV+L +++G
Sbjct: 208 E-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 52 IGEGGFGSVYK----GRLKDGKI--AAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G K+ + A+K+L + + KE ++E++++S + +HEN+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGIARGL 159
L G C G +++ Y L L + + R +A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-TIGYLA 218
AFL + + IHRD+ A N+LL KI DFGLA+ I + ++ A + ++A
Sbjct: 166 AFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVS 245
PE T ++D++S+G+LL EI S
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 23/238 (9%)
Query: 19 PEVDE----EFSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVY----KGRLKDGKI 70
P DE E S H+VK S K F + +G+G FG V+ R G +
Sbjct: 2 PSKDEGVLKEISITHHVKAGSEK---ADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHL 58
Query: 71 AAIKVLSAESRQGVKEFLTEIQ--VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLA 128
A+KVL + + T+++ +++++ H +VKL+ L+ ++L L
Sbjct: 59 YAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLF 118
Query: 129 QTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTP 188
L + F+ +A GL LH II+RD+K NILLD++
Sbjct: 119 TRL------SKEVMFTEEDVKFYLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHI 169
Query: 189 KISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
K++DFGL+K + + GT+ Y+APE R + AD +S+GVL+ E+++G
Sbjct: 170 KLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 24/212 (11%)
Query: 45 DFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGV-----KEFLTEIQVISEIE 98
+F I +G G FG+VYKG + +G+ I V E R+ KE L E V++ ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIG 154
+ ++ +L G C+ + L+ + L + H NI +W C+
Sbjct: 83 NPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYV---REHKDNIGSQYLLNW------CVQ 132
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT- 213
IA+G+ +L + ++HRD+ A N+L+ KI+DFG AKL+ A
Sbjct: 133 IAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I ++A E + T ++D++S+GV + E+++
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 137
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 138 KYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 194
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 120 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 119/283 (42%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS++ H+N
Sbjct: 36 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQN 95
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ I A+ + +
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 257
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 258 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 139
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 157
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 158 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 214
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 29/220 (13%)
Query: 52 IGEGGFGSVYK----GRLKDGKI--AAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G K+ + A+K+L + + KE ++E++++S + +HEN+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 104 KLYGCCVEGNHRILVYNYLENNSL-------AQTLIG----------GGHHYSNIQFSWR 146
L G C G +++ Y L A+ ++G G R
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV 206
+A+G+AFL + + IHRD+ A N+LL KI DFGLA+ I + ++
Sbjct: 159 DLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 207 STRVAG-TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
A + ++APE T ++D++S+G+LL EI S
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQN 109
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAK-LIPANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ + A+ + +
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 271
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 272 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 119/283 (42%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS++ H+N
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQN 109
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ I A+ + +
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 271
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 272 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG +G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 122/296 (41%), Gaps = 60/296 (20%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 62 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 121
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR----------- 150
+V+ G ++ R ++ L+ GG S F TR R
Sbjct: 122 IVRCIGVSLQSLPRFILLE----------LMAGGDLKS---FLRETRPRPSQPSSLAMLD 168
Query: 151 ---ICIGIARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAK-LIPANM 203
+ IA G +L E H IHRDI A N LL KI DFG+A+ + A+
Sbjct: 169 LLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 204 THVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ ++ PE + G T K D +SFGVLL EI S M P++
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN---- 278
Query: 264 RTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
+E++ V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 279 --------QEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 324
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGR----LKDGKIAAIKVLS----AESRQGVKEFLTEIQ 92
I + F + +G+GG+G V++ R GKI A+KVL + + E
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
++ E++H +V L G L+ YL L L G F T
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG------IFMEDTACFYL 127
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
I+ L LH++ II+RD+K NI+L+ K++DFGL K + T V+ G
Sbjct: 128 AEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCG 183
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
TI Y+APE +R R D +S G L+ ++++G
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 144/311 (46%), Gaps = 39/311 (12%)
Query: 42 ATDDFSPINKIGEGGFG-SVYKGRLKDGKIAAIKVL--SAESRQGVKEFLTEIQVISEIE 98
+ + + + KIGEG FG ++ +DG+ IK + S S + +E E+ V++ ++
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTL-IGGGHHYSNIQ-FSWRTRSRICIGIA 156
H N+V+ E +V +Y E L + + G + Q W + IC+
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ--ICLA-- 137
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGY 216
L +H+ I+HRDIK+ NI L KD T ++ DFG+A+++ + + ++ GT Y
Sbjct: 138 --LKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-ELARACIGTPYY 191
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
L+PE K+DI++ G +L E+ + L+ ++ + L+L
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCT----------------LKHAFEAGSMKNLVL 235
Query: 277 LVDTSLNGDFDAEEACRFLKVGLLCTQ---DTPKLRPSMSTVVQMLMGEKDIDDDKITKP 333
+ ++G F + L +Q P+ RPS++++++ K I +K P
Sbjct: 236 KI---ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI--EKFLSP 290
Query: 334 GLISDFMDLKV 344
LI++ LK
Sbjct: 291 QLIAEEFCLKT 301
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 52 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 111
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAK-LIPANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ + A+ + +
Sbjct: 172 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 228
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 229 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 273
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 274 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 314
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ I A+ + +
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 256
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 257 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 42 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 101
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAK-LIPANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ + A+ + +
Sbjct: 162 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 218
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 219 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 263
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 264 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 304
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 36 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 95
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ I A+ + +
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 212
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 213 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 257
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 258 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 141
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T Y
Sbjct: 142 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYR 198
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V L ++A K+ E + + L EI+++ HEN++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 104 KL----YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 142
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T Y
Sbjct: 143 KYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYR 199
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 18/209 (8%)
Query: 46 FSPINKIGEGGFGSVYKGR----LKDGKIAAIKVLS----AESRQGVKEFLTEIQVISEI 97
F + +G+GG+G V++ R GKI A+KVL + + E ++ E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H +V L G L+ YL L L G F T I+
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG------IFMEDTACFYLAEISM 132
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
L LH++ II+RD+K NI+L+ K++DFGL K + T V+ GTI Y+
Sbjct: 133 ALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYM 188
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE +R R D +S G L+ ++++G
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 116/240 (48%), Gaps = 30/240 (12%)
Query: 25 FSGIH-NVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKI-AAIKVLS----- 77
F GI N +Y K+ + + + K+G G +G V + K+G AIKV+
Sbjct: 16 FQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFD 75
Query: 78 ----AESRQGVKEF----LTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQ 129
++ + +++F EI ++ ++H N++KL+ + + LV + E L +
Sbjct: 76 KGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFE 135
Query: 130 TLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKD---L 186
+I H +F + I I G+ +LH + +I+HRDIK NILL+ L
Sbjct: 136 QII--NRH----KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLL 186
Query: 187 TPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
KI DFGL+ + + R+ GT Y+APE ++ + K D++S GV++ ++ G
Sbjct: 187 NIKIVDFGLSSFFSKDYK-LRDRL-GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 94
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ I A+ + +
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 211
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 212 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 256
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 257 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 60/296 (20%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 36 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 95
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR----------- 150
+V+ G ++ R ++ L+ GG S F TR R
Sbjct: 96 IVRCIGVSLQSLPRFILLE----------LMAGGDLKS---FLRETRPRPSQPSSLAMLD 142
Query: 151 ---ICIGIARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLI-PANM 203
+ IA G +L E H IHRDI A N LL KI DFG+A+ I A+
Sbjct: 143 LLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 204 THVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ ++ PE + G T K D +SFGVLL EI S M P++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN---- 252
Query: 264 RTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
+E++ V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 253 --------QEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
DF I +G+G FG V K R D + AIK + + + + L+E+ +++ + H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 104 KLYGCCVEGNHRI-------------LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
+ Y +E + + + Y EN +L + H N+ R
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI-----HSENLNQQRDEYWR 120
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA----------KLIP 200
+ I L+++H + IIHRD+K NI +D+ KI DFGLA KL
Sbjct: 121 LFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 201 ANMTHVS---TRVAGTIGYLAPEYAI-RGQVTRKADIYSFGVLLVEIV 244
N+ S T GT Y+A E G K D+YS G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 46 FSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
++ ++ IGEG +G V + ++A K+ E + + L EI+++ HEN++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 104 KLY----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+ +E + + L L + L H SN + I RGL
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLL--KTQHLSNDHICY-----FLYQILRGL 139
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS--TRVAGTIGYL 217
++H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y
Sbjct: 140 KYIHSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYR 196
Query: 218 APEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
APE + + T+ DI+S G +L E++S R
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 109
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAK-LIPANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ + A+ + +
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 226
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 227 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 271
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 272 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 27 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 86
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAK-LIPANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ + A+ + +
Sbjct: 147 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 248
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 249 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 289
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGR-LKDG-KIAAIKVLSAES-RQGVK-EFLTEIQVI 94
L A + + +IGEG +G V+K R LK+G + A+K + ++ +G+ + E+ V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 95 SEIE---HENLVKLYGCC-VEGNHR----ILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+E H N+V+L+ C V R LV+ +++ Q L
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-----QDLTTYLDKVPEPGVPTE 120
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV 206
T + + RGL FLH ++HRD+K NIL+ K++DFGLA++ M
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-- 175
Query: 207 STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEI 243
T V T+ Y APE ++ D++S G + E+
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 37/228 (16%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
DF I +G+G FG V K R D + AIK + + + + L+E+ +++ + H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVV 65
Query: 104 KLYGCCVEGNHRI-------------LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
+ Y +E + + + Y EN +L + H N+ R
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI-----HSENLNQQRDEYWR 120
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA----------KLIP 200
+ I L+++H + IIHRD+K NI +D+ KI DFGLA KL
Sbjct: 121 LFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 201 ANMTHVS---TRVAGTIGYLAPEYAI-RGQVTRKADIYSFGVLLVEIV 244
N+ S T GT Y+A E G K D+YS G++ E++
Sbjct: 178 QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 121/296 (40%), Gaps = 60/296 (20%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 135
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR----------- 150
+V+ G ++ R ++ L+ GG S F TR R
Sbjct: 136 IVRCIGVSLQSLPRFILLE----------LMAGGDLKS---FLRETRPRPSQPSSLAMLD 182
Query: 151 ---ICIGIARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAK-LIPANM 203
+ IA G +L E H IHRDI A N LL KI DFG+A+ + A
Sbjct: 183 LLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 239
Query: 204 THVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ ++ PE + G T K D +SFGVLL EI S M P++
Sbjct: 240 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN---- 292
Query: 264 RTWDLYERRELILLVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
+E++ V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 293 --------QEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 338
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 34/283 (12%)
Query: 49 INKIGEGGFGSVYKGRLKDG-------KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
I +G G FG VY+G++ ++A + S Q +FL E +IS+ H+N
Sbjct: 53 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 112
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGIARGLA 160
+V+ G ++ R ++ + L L S + + IA G
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 161 FLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLI-PANMTHVSTRVAGTIGY 216
+L E H IHRDI A N LL KI DFG+A+ I A + +
Sbjct: 173 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 217 LAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELIL 276
+ PE + G T K D +SFGVLL EI S M P++ +E++
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFS---LGYMPYPSKSN------------QEVLE 274
Query: 277 LVDTSLNGDFDAEEAC--RFLKVGLLCTQDTPKLRPSMSTVVQ 317
V + G D + C ++ C Q P+ RP+ + +++
Sbjct: 275 FVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILE 315
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGR-LKDG-KIAAIKVLSAES-RQGVK-EFLTEIQVI 94
L A + + +IGEG +G V+K R LK+G + A+K + ++ +G+ + E+ V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 95 SEIE---HENLVKLYGCC-VEGNHR----ILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+E H N+V+L+ C V R LV+ +++ Q L
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-----QDLTTYLDKVPEPGVPTE 120
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV 206
T + + RGL FLH ++HRD+K NIL+ K++DFGLA++ M
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 207 STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEI 243
S V T+ Y APE ++ D++S G + E+
Sbjct: 178 SVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGR-LKDG-KIAAIKVLSAES-RQGVK-EFLTEIQVI 94
L A + + +IGEG +G V+K R LK+G + A+K + ++ +G+ + E+ V+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 95 SEIE---HENLVKLYGCC-VEGNHR----ILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+E H N+V+L+ C V R LV+ +++ Q L
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-----QDLTTYLDKVPEPGVPTE 120
Query: 147 TRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV 206
T + + RGL FLH ++HRD+K NIL+ K++DFGLA++ M
Sbjct: 121 TIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 177
Query: 207 STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEI 243
S V T+ Y APE ++ D++S G + E+
Sbjct: 178 SVVV--TLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQ---GVKEFLTEIQVISE 96
+ + F +G+GGFG V +++ GK+ A K L + + G L E Q++ +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGG------HHYSNIQFSWRTRSR 150
+ +V L Y + L TL+ GG +H F
Sbjct: 241 VNSRFVVSL----------AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
I GL LH E I++RD+K NILLD +ISD GLA +P T + RV
Sbjct: 291 YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV 346
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMR 253
GT+GY+APE + T D ++ G LL E+++G+ R
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ +DF + +G+G FG V R K G+ A+K+L E ++ V +TE +V+
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELF-------FHLSRERVFTEERARFYGAEI 117
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH +++RDIK N++LDKD KI+DFGL K ++ + T GT
Sbjct: 118 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPE 173
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 43 TDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHE 100
+D+ + +GEG G V R+ + +A V + + EI + + HE
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+VK YG EGN + L Y L + +I R + G+
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI------EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+LH I HRDIK N+LLD+ KISDFGLA + N + ++ GT+ Y+AP
Sbjct: 119 YLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E R + D++S G++L +++G
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ +DF + +G+G FG V R K G+ A+K+L E ++ V +TE +V+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-I 155
H L L + V Y L H S + R+R I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELF-------FHLSRERVFTEERARFYGAEI 114
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH +++RDIK N++LDKD KI+DFGL K ++ + T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPE 170
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ +DF + +G+G FG V R K G+ A+K+L E ++ V +TE +V+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELF-------FHLSRERVFTEERARFYGAEI 114
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH +++RDIK N++LDKD KI+DFGL K ++ + T GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPE 170
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 49 INKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENLVKLY 106
++K+GEG + +VYKG+ K + A+K + E +G + E+ ++ +++H N+V L+
Sbjct: 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGH--HYSNIQFSWRTRSRICIGIARGLAFLHE 164
LV+ YL+ + L Q L G+ + N++ + RGLA+ H
Sbjct: 67 DIIHTEKSLTLVFEYLDKD-LKQYLDDCGNIINMHNVKL-------FLFQLLRGLAYCH- 117
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGL--AKLIPANMTHVSTRVAGTIGYLAPEYA 222
R ++HRD+K N+L+++ K++DFGL AK IP T T+ Y P+
Sbjct: 118 --RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYDNEVVTLWYRPPDIL 172
Query: 223 I-RGQVTRKADIYSFGVLLVEIVSGR 247
+ + + D++ G + E+ +GR
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQ------GVKEFLTEIQV 93
+AT + P+ +IG G +G+VYK R G A+K + + + V+E + ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRR 59
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EH N+V+L C + L + Q L T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
RGL FLH I+HRD+K NIL+ T K++DFGLA++ M V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--T 174
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEI 243
+ Y APE ++ D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
+G+G +G VY GR L + AIK + + + EI + ++H+N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E + + SL+ L + ++ + +T I GL +LH+ I
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 143
Query: 171 IHRDIKASNILLDK-DLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ--V 227
+HRDIK N+L++ KISDFG +K + A + + GT+ Y+APE +G
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 228 TRKADIYSFGVLLVEIVSGR 247
+ ADI+S G ++E+ +G+
Sbjct: 203 GKAADIWSLGCTIIEMATGK 222
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 99/223 (44%), Gaps = 25/223 (11%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQ---GVKEFLTEIQVISE 96
+ + F +G+GGFG V +++ GK+ A K L + + G L E Q++ +
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK 240
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGG------HHYSNIQFSWRTRSR 150
+ +V L Y + L TL+ GG +H F
Sbjct: 241 VNSRFVVSL----------AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
I GL LH E I++RD+K NILLD +ISD GLA +P T + RV
Sbjct: 291 YAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV 346
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMR 253
GT+GY+APE + T D ++ G LL E+++G+ R
Sbjct: 347 -GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG----KIAAIKVLSAESRQGVKEFLTEIQ--VISEIEH 99
F + +G+G FG V+ + G ++ A+KVL + + T+++ ++ E+ H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+VKL+ L+ ++L L L + F+ +A L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALAL 139
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH--VSTRVAGTIGYL 217
LH II+RD+K NILLD++ K++DFGL+K ++ H + GT+ Y+
Sbjct: 140 DHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 193
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE R T+ AD +SFGVL+ E+++G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 45 DFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
DF I IG GGFG V+K + + DGK I+ + + + +E ++ +++++H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 104 KLYGCC-------VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-------SWRTRS 149
GC + + +Y NS + + ++F W +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 150 R-----------ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKL 198
R + I +G+ ++H + +IHRD+K SNI L KI DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 199 IPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIV 244
+ + TR GT+ Y++PE ++ D+Y+ G++L E++
Sbjct: 186 LKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQ------GVKEFLTEIQV 93
+AT + P+ +IG G +G+VYK R G A+K + + + V+E + ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRR 59
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EH N+V+L C + L + Q L T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
RGL FLH I+HRD+K NIL+ T K++DFGLA++ M V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--T 174
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEI 243
+ Y APE ++ D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKG-RLKDGK----IAAIKVLSAES-RQGVKEFLTEIQVISEIEHENLVKL 105
+G G FG+V+KG + +G+ IKV+ +S RQ + + I ++H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGG-GHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G C G+ LV YL SL + G + +W + IA+G+ +L E
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 151
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYLAPEYAI 223
++HR++ A N+LL +++DFG+A L+P + + A T I ++A E
Sbjct: 152 H---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
G+ T ++D++S+GV + E+++
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMT 230
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG----KIAAIKVLSAESRQGVKEFLTEIQ--VISEIEH 99
F + +G+G FG V+ + G ++ A+KVL + + T+++ ++ E+ H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+VKL+ L+ ++L L L + F+ +A L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALAL 139
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH--VSTRVAGTIGYL 217
LH II+RD+K NILLD++ K++DFGL+K ++ H + GT+ Y+
Sbjct: 140 DHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 193
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE R T+ AD +SFGVL+ E+++G
Sbjct: 194 APEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG----KIAAIKVLSAESRQGVKEFLTEIQ--VISEIEH 99
F + +G+G FG V+ + G ++ A+KVL + + T+++ ++ E+ H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
+VKL+ L+ ++L L L + F+ +A L
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL------SKEVMFTEEDVKFYLAELALAL 140
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH--VSTRVAGTIGYL 217
LH II+RD+K NILLD++ K++DFGL+K ++ H + GT+ Y+
Sbjct: 141 DHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYM 194
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE R T+ AD +SFGVL+ E+++G
Sbjct: 195 APEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + +VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 192
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
+G+G +G VY GR L + AIK + + + EI + ++H+N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
E + + SL+ L + ++ + +T I GL +LH+ I
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGFYTKQILEGLKYLHDN---QI 129
Query: 171 IHRDIKASNILLDK-DLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ--V 227
+HRDIK N+L++ KISDFG +K + A + + GT+ Y+APE +G
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 228 TRKADIYSFGVLLVEIVSGR 247
+ ADI+S G ++E+ +G+
Sbjct: 189 GKAADIWSLGCTIIEMATGK 208
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 51 KIGEGGFGSVYKGR-LKDGKIAAIK------VLSAESRQGVKEFLTEIQVISEIEHENLV 103
KIG G F VY+ L DG A+K ++ A++R + + EI ++ ++ H N++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKAR---ADCIKEIDLLKQLNHPNVI 95
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ--FSWRTRSRICIGIARGLAF 161
K Y +E N +V + L++ + H+ + RT + + + L
Sbjct: 96 KYYASFIEDNELNIVLELADAGDLSRMI----KHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
+H ++HRDIK +N+ + K+ D GL + + T + V GT Y++PE
Sbjct: 152 MHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPER 207
Query: 222 AIRGQVTRKADIYSFGVLLVEIVS 245
K+DI+S G LL E+ +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG--KIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENL 102
+ + KIG+G FG V+K R + K+A KVL ++G L EI+++ ++HEN+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 103 VKLYGCC---VEGNHRI-----LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
V L C +R LV+++ E++ + G ++F+ R+
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHD------LAGLLSNVLVKFTLSEIKRVMQM 132
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-- 212
+ GL ++H R I+HRD+KA+N+L+ +D K++DFGLA+ R
Sbjct: 133 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 189
Query: 213 -TIGYLAPEYAI-RGQVTRKADIYSFGVLLVEI 243
T+ Y PE + D++ G ++ E+
Sbjct: 190 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG--KIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENL 102
+ + KIG+G FG V+K R + K+A KVL ++G L EI+++ ++HEN+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 103 VKLYGCC---VEGNHRI-----LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
V L C +R LV+++ E++ + G ++F+ R+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHD------LAGLLSNVLVKFTLSEIKRVMQM 133
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-- 212
+ GL ++H R I+HRD+KA+N+L+ +D K++DFGLA+ R
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 213 -TIGYLAPEYAI-RGQVTRKADIYSFGVLLVEI 243
T+ Y PE + D++ G ++ E+
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKG-RLKDGK----IAAIKVLSAES-RQGVKEFLTEIQVISEIEHENLVKL 105
+G G FG+V+KG + +G+ IKV+ +S RQ + + I ++H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGG-GHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G C G+ LV YL SL + G + +W + IA+G+ +L E
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ------IAKGMYYLEE 133
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT-IGYLAPEYAI 223
++HR++ A N+LL +++DFG+A L+P + + A T I ++A E
Sbjct: 134 H---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
G+ T ++D++S+GV + E+++
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMT 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG--KIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENL 102
+ + KIG+G FG V+K R + K+A KVL ++G L EI+++ ++HEN+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 103 VKLYGCC---VEGNHRI-----LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
V L C +R LV+++ E++ + G ++F+ R+
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEHD------LAGLLSNVLVKFTLSEIKRVMQM 133
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-- 212
+ GL ++H R I+HRD+KA+N+L+ +D K++DFGLA+ R
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 213 -TIGYLAPEYAI-RGQVTRKADIYSFGVLLVEI 243
T+ Y PE + D++ G ++ E+
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQ------GVKEFLTEIQV 93
+AT + P+ +IG G +G+VYK R G A+K + + + V+E + ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRR 59
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
+ EH N+V+L C + L + Q L T +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
RGL FLH I+HRD+K NIL+ T K++DFGLA++ M V T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPVVVT 174
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEI 243
+ Y APE ++ D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 24/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG--KIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENL 102
+ + KIG+G FG V+K R + K+A KVL ++G L EI+++ ++HEN+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 103 VKLYGCC---VEGNHRI-----LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
V L C +R LV+++ E++ + G ++F+ R+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHD------LAGLLSNVLVKFTLSEIKRVMQM 133
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-- 212
+ GL ++H R I+HRD+KA+N+L+ +D K++DFGLA+ R
Sbjct: 134 LLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRV 190
Query: 213 -TIGYLAPEYAI-RGQVTRKADIYSFGVLLVEI 243
T+ Y PE + D++ G ++ E+
Sbjct: 191 VTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 96
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y APE
Sbjct: 154 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 205
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKDGKI----AAIKVLS-AESRQGVKEFLTEIQVISEIEHENLVKLY 106
IG+G FG VY G D AIK LS Q V+ FL E ++ + H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 107 GCCV--EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG--IARGLAFL 162
G + EG +L+ Y+ + L Q + + Q + + I G +ARG+ +L
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFI-------RSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-----ANMTHVSTRVAGTIGYL 217
E+ +HRD+ A N +LD+ T K++DFGLA+ I + H R+ + +
Sbjct: 141 AEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLP--VKWT 195
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVS 245
A E + T K+D++SFGVLL E+++
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y APE
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 192
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 52 IGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFL-TEIQVISEIEHENLVKLYGCC 109
+G G F V K GK+ A+K + ++ +G + + EI V+ +I+HEN+V L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIY 89
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
NH LV + L ++ G ++ + S + + + +LH R
Sbjct: 90 ESPNHLYLVMQLVSGGELFDRIVEKGF------YTEKDASTLIRQVLDAVYYLH---RMG 140
Query: 170 IIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ 226
I+HRD+K N+L D++ ISDFGL+K+ V + GT GY+APE +
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKP 198
Query: 227 VTRKADIYSFGVLLVEIVSG 246
++ D +S GV+ ++ G
Sbjct: 199 YSKAVDCWSIGVIAYILLCG 218
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 111
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y APE
Sbjct: 169 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 220
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ +DF + +G+G FG V R K G+ A+K+L E ++ V +TE +V+
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELF-------FHLSRERVFTEERARFYGAEI 119
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH +++RDIK N++LDKD KI+DFGL K ++ + GT
Sbjct: 120 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPE 175
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ +DF + +G+G FG V R K G+ A+K+L E ++ V +TE +V+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELF-------FHLSRERVFTEERARFYGAEI 114
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH +++RDIK N++LDKD KI+DFGL K ++ + GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPE 170
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 117
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y APE
Sbjct: 175 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 226
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 88
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y APE
Sbjct: 146 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 197
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 47/244 (19%)
Query: 46 FSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLS----AESRQGV-KEFLTEIQVISEIEH 99
+ ++ +GEG F +VYK R K+ +I AIK + +E++ G+ + L EI+++ E+ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 100 ENLVKLYGCCVEGNHRILVYNYLE--------NNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
N++ L ++ LV++++E +NSL T S+I+
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT-------PSHIK-------AY 117
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ +GL +LH+ I+HRD+K +N+LLD++ K++DFGLAK + +V
Sbjct: 118 MLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 212 GTIGYLAPEYAIRGQVTR-KADIYSFGVLLVEIV--------------SGRCNTNMRLPT 256
T Y APE ++ D+++ G +L E++ R + PT
Sbjct: 175 -TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233
Query: 257 EEQY 260
EEQ+
Sbjct: 234 EEQW 237
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 35/261 (13%)
Query: 49 INKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLY- 106
+ +G GG G V+ D K AIK + Q VK L EI++I ++H+N+VK++
Sbjct: 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFE 75
Query: 107 -------------GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI 153
G E N +V Y+E + LA L G +R+ +
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMETD-LANVLEQGP--------LLEEHARLFM 126
Query: 154 -GIARGLAFLHEEVRPHIIHRDIKASNILLD-KDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ RGL ++H +++HRD+K +N+ ++ +DL KI DFGLA+++ + +H
Sbjct: 127 YQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 212 GTIG--YLAPEYAIR-GQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEE-QYLLERTWD 267
G + Y +P + T+ D+++ G + E+++G+ E+ Q +LE
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 268 LYE--RRELILLVDTSLNGDF 286
++E R+EL+ ++ + D
Sbjct: 244 VHEEDRQELLSVIPVYIRNDM 264
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 119
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y APE
Sbjct: 177 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 228
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 121
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y APE
Sbjct: 179 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 230
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 18/208 (8%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVL--SAESRQGVKEFLT-EIQVISEIEH 99
DDF +G+G FG+VY R K I A+KVL S ++GV+ L EI++ + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
N+++LY + L+ Y L + L + F + + I +A L
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL------QKSCTFDEQRTATIMEELADAL 136
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
+ H + +IHRDIK N+LL KI+DFG + P+ + GT+ YL P
Sbjct: 137 MYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT---MCGTLDYLPP 190
Query: 220 EYAIRGQV-TRKADIYSFGVLLVEIVSG 246
E I G++ K D++ GVL E++ G
Sbjct: 191 E-MIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 28/232 (12%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQG 83
F NV+L + + +DFS IG GGFG VY R D GK+ A+K L ++
Sbjct: 174 FCQWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKR 226
Query: 84 VKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLI-----GGGHHY 138
+K E ++E +LV C I+ +Y + + I GG HY
Sbjct: 227 IKMKQGETLALNERIMLSLVSTGDCPF-----IVCMSYAFHTPDKLSFILDLMNGGDLHY 281
Query: 139 SNIQ---FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGL 195
Q FS I GL +H +++RD+K +NILLD+ +ISD GL
Sbjct: 282 HLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL 338
Query: 196 AKLIPANMTHVSTRVAGTIGYLAPEYAIRG-QVTRKADIYSFGVLLVEIVSG 246
A H S GT GY+APE +G AD +S G +L +++ G
Sbjct: 339 ACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ +DF + +G+G FG V R K G+ A+K+L E ++ V +TE +V+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELF-------FHLSRERVFTEERARFYGAEI 114
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH +++RDIK N++LDKD KI+DFGL K ++ + GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPE 170
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 28/232 (12%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQG 83
F NV+L + + +DFS IG GGFG VY R D GK+ A+K L ++
Sbjct: 174 FCQWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKR 226
Query: 84 VKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLI-----GGGHHY 138
+K E ++E +LV C I+ +Y + + I GG HY
Sbjct: 227 IKMKQGETLALNERIMLSLVSTGDCPF-----IVCMSYAFHTPDKLSFILDLMNGGDLHY 281
Query: 139 SNIQ---FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGL 195
Q FS I GL +H +++RD+K +NILLD+ +ISD GL
Sbjct: 282 HLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL 338
Query: 196 AKLIPANMTHVSTRVAGTIGYLAPEYAIRG-QVTRKADIYSFGVLLVEIVSG 246
A H S GT GY+APE +G AD +S G +L +++ G
Sbjct: 339 ACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ +DF + +G+G FG V R K G+ A+K+L E ++ V +TE +V+
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELF-------FHLSRERVFTEERARFYGAEI 114
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH +++RDIK N++LDKD KI+DFGL K ++ + GT
Sbjct: 115 VSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTPE 170
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L H + + ++ G+ +L E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLEES 146
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 147 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L H + + ++ G+ +L E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLEES 146
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 147 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 28/232 (12%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQG 83
F NV+L + + +DFS IG GGFG VY R D GK+ A+K L ++
Sbjct: 173 FCQWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKR 225
Query: 84 VKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLI-----GGGHHY 138
+K E ++E +LV C I+ +Y + + I GG HY
Sbjct: 226 IKMKQGETLALNERIMLSLVSTGDCPF-----IVCMSYAFHTPDKLSFILDLMNGGDLHY 280
Query: 139 SNIQ---FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGL 195
Q FS I GL +H +++RD+K +NILLD+ +ISD GL
Sbjct: 281 HLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL 337
Query: 196 AKLIPANMTHVSTRVAGTIGYLAPEYAIRG-QVTRKADIYSFGVLLVEIVSG 246
A H S GT GY+APE +G AD +S G +L +++ G
Sbjct: 338 ACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIK-VLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGC 108
IG G FG VY+ +L D G++ AIK VL ++ + E+Q++ +++H N+V+L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIVRLRYFF 82
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLH 163
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH 139
Query: 164 EEVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 220 EYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
E T D++S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 103/232 (44%), Gaps = 28/232 (12%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQG 83
F NV+L + + +DFS IG GGFG VY R D GK+ A+K L ++
Sbjct: 174 FCQWKNVEL----NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKR 226
Query: 84 VKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLI-----GGGHHY 138
+K E ++E +LV C I+ +Y + + I GG HY
Sbjct: 227 IKMKQGETLALNERIMLSLVSTGDCPF-----IVCMSYAFHTPDKLSFILDLMNGGDLHY 281
Query: 139 SNIQ---FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGL 195
Q FS I GL +H +++RD+K +NILLD+ +ISD GL
Sbjct: 282 HLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGL 338
Query: 196 AKLIPANMTHVSTRVAGTIGYLAPEYAIRG-QVTRKADIYSFGVLLVEIVSG 246
A H S GT GY+APE +G AD +S G +L +++ G
Sbjct: 339 ACDFSKKKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 162
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y APE
Sbjct: 220 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 271
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 84
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 142 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 193
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVK---EFLTEIQVISEIEHENLVKLYG 107
+G GG V+ R L+D + A+KVL A+ + F E Q + + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 108 C----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
G +V Y++ +L + ++ + + + + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSH 133
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEY 221
+ IIHRD+K +NIL+ K+ DFG+A+ I N + V GT YL+PE
Sbjct: 134 QN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQ 190
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
A V ++D+YS G +L E+++G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 29/209 (13%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIK-VLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGC 108
IG G FG VY+ +L D G++ AIK VL ++ + E+Q++ +++H N+V+L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIVRLRYFF 82
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLH 163
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH 139
Query: 164 EEVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
I HRDIK N+LLD D K+ DFG AK + N++++ +R Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 220 EYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
E T D++S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 192
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 132/306 (43%), Gaps = 48/306 (15%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKI-AAIKVLSAES---RQGVKEFLTEIQVI-SEIEH 99
DF + IG+G FG V R K ++ A+KVL ++ ++ K ++E V+ ++H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFS---WRTRSRICIG-I 155
LV L+ + V +Y I GG + ++Q R+R I
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDY----------INGGELFYHLQRERCFLEPRARFYAAEI 148
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST--RVAGT 213
A L +LH +I++RD+K NILLD ++DFGL K N+ H ST GT
Sbjct: 149 ASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGT 202
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRE 273
YLAPE + R D + G +L E++ G LP + T ++Y+
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG-------LPP---FYSRNTAEMYDN-- 250
Query: 274 LILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPS------MSTVVQMLMGEKDIDD 327
+++ L + + R L GLL T +L S V L+ D+ +
Sbjct: 251 ---ILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLIN 307
Query: 328 DKITKP 333
KIT P
Sbjct: 308 KKITPP 313
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ ++F + +G+G FG V + K G+ A+K+L E ++ V LTE +V+
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF-------FHLSRERVFSEDRARFYGAEI 260
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH E ++++RD+K N++LDKD KI+DFGL K + + T GT
Sbjct: 261 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPE 317
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ ++F + +G+G FG V + K G+ A+K+L E ++ V LTE +V+
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF-------FHLSRERVFSEDRARFYGAEI 257
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH E ++++RD+K N++LDKD KI+DFGL K + + T GT
Sbjct: 258 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPE 314
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 91
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 149 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 200
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L H + + ++ G+ +L E
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLEES 144
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 145 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 102
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 160 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 211
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 192
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 95
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 153 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 204
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 87
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 145 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 196
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 95
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 153 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 204
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L H + + ++ G+ +L E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLEES 130
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 131 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGCC 109
IG G FG VY+ +L D G++ AIK + + R +E +Q++ +++H N+V+L Y
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 117
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLHE 164
G + VY L + + +T+ HYS + +T I + + R LA++H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 165 EVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAPE 220
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y APE
Sbjct: 175 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 226
Query: 221 YAIRG-QVTRKADIYSFGVLLVEIVSGR 247
T D++S G +L E++ G+
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAE-SRQGVKEFLTEIQVISEIEHENLVKLYGC 108
++G GGFG V + +D G+ AIK E S + + + EIQ++ ++ H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 109 ------CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-IARGLAF 161
+ +L Y E L + L + + N R + I+ L +
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYL----NQFENCCGLKEGPIRTLLSDISSALRY 136
Query: 162 LHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
LHE IIHRD+K NI+L + L KI D G AK + + + T GT+ YLA
Sbjct: 137 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLA 191
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVSG 246
PE + + T D +SFG L E ++G
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 41/238 (17%)
Query: 31 VKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIK-VLSAESRQGVKEFL 88
+K+ + +D + +IG G +GSV K K G+I A+K + S + K+ L
Sbjct: 9 LKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLL 68
Query: 89 TEIQVI-SEIEHENLVKLYGCCV-EGNHRILV----------YNYLE---NNSLAQTLIG 133
++ V+ + +V+ YG EG+ I + Y Y+ ++ + + ++G
Sbjct: 69 MDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILG 128
Query: 134 GGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDF 193
+I + + L L E ++ IIHRDIK SNILLD+ K+ DF
Sbjct: 129 ----------------KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDF 170
Query: 194 GLAKLIPANMTHVSTRVAGTIGYLAPE----YAIRGQVTRKADIYSFGVLLVEIVSGR 247
G++ + ++ TR AG Y+APE A R ++D++S G+ L E+ +GR
Sbjct: 171 GISGQLVDSIAK--TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L H + + ++ G+ +L E
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLEES 126
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 127 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 21/208 (10%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVLSAE-SRQGVKEFLTEIQVISEIEHENLVKLYGC 108
++G GGFG V + +D G+ AIK E S + + + EIQ++ ++ H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 109 ------CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-IARGLAF 161
+ +L Y E L + L + + N R + I+ L +
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYL----NQFENCCGLKEGPIRTLLSDISSALRY 137
Query: 162 LHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
LHE IIHRD+K NI+L + L KI D G AK + + + T GT+ YLA
Sbjct: 138 LHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLA 192
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVSG 246
PE + + T D +SFG L E ++G
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVK---EFLTEIQVISEIEHENLVKLYG 107
+G GG V+ R L+D + A+KVL A+ + F E Q + + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 108 C----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
G +V Y++ +L + ++ + + + + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSH 133
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEY 221
+ IIHRD+K +NI++ K+ DFG+A+ I N + V GT YL+PE
Sbjct: 134 QN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
A V ++D+YS G +L E+++G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
DF I +G+G FG V K R D + AIK + + + + L+E+ +++ + H+ +V
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVV 65
Query: 104 KLYGCCVEGNHRI-------------LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
+ Y +E + + + Y EN +L + H N+ R
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI-----HSENLNQQRDEYWR 120
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA----------KLIP 200
+ I L+++H + IIHR++K NI +D+ KI DFGLA KL
Sbjct: 121 LFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDS 177
Query: 201 ANMTHVS---TRVAGTIGYLAPEYAI-RGQVTRKADIYSFGVLLVEIV 244
N+ S T GT Y+A E G K D YS G++ E +
Sbjct: 178 QNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
IG+G FG V++G+ + G+ A+K+ S+ E R +E EI + HEN++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 106
Query: 111 EGN----HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
+ N LV +Y E+ SL L + + ++ + A GLA LH E+
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHMEI 159
Query: 167 -----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS---TRVAGTIGYLA 218
+P I HRD+K+ NIL+ K+ T I+D GLA + + GT Y+A
Sbjct: 160 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 219 PEYAIRG------QVTRKADIYSFGVLLVEIVSGRCN 249
PE + ++ADIY+ G++ EI RC+
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCS 255
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L H + + ++ G+ +L E
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLEES 136
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 137 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFS 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVK---EFLTEIQVISEIEHENLVKLYG 107
+G GG V+ R L+D + A+KVL A+ + F E Q + + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 108 C----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
G +V Y++ +L + ++ + + + + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSH 133
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEY 221
+ IIHRD+K +NI++ K+ DFG+A+ I N + V GT YL+PE
Sbjct: 134 QN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
A V ++D+YS G +L E+++G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-------LIYQILR 132
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L H + + ++ G+ +L E
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLEES 124
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 125 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
IG+G FG V++G+ + G+ A+K+ S+ E R +E EI + HEN++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 93
Query: 111 EGN----HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
+ N LV +Y E+ SL L + + ++ + A GLA LH E+
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHMEI 146
Query: 167 -----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS---TRVAGTIGYLA 218
+P I HRD+K+ NIL+ K+ T I+D GLA + + GT Y+A
Sbjct: 147 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 219 PEY------AIRGQVTRKADIYSFGVLLVEIVSGRCN 249
PE + ++ADIY+ G++ EI RC+
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCS 242
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 23 EEFSGIHNVKLYSYKELS---IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSA 78
E ++ ++ +K L + D F +G GGFG V+ ++K GK+ A K L+
Sbjct: 161 EFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK 220
Query: 79 ESRQ---GVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGG 135
+ + G + + E ++++++ +V L + + L T++ GG
Sbjct: 221 KRLKKRKGYQGAMVEKKILAKVHSRFIVSL----------AYAFETKTDLCLVMTIMNGG 270
Query: 136 ---HHYSNIQ-----FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLT 187
+H N+ F I GL LH+ +II+RD+K N+LLD D
Sbjct: 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGN 327
Query: 188 PKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
+ISD GLA + A T AGT G++APE + + D ++ GV L E+++ R
Sbjct: 328 VRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ IG G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 141
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 37/223 (16%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLV 103
D + + +G+G +G V++G + G+ A+K+ S+ + + +E TE+ + HEN++
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENIL 65
Query: 104 KLYGCCVEGNHR----ILVYNYLENNSLAQTLIGGGHHYSNIQFS-WRTRS--RICIGIA 156
+ H L+ +Y E SL Y +Q + T S RI + IA
Sbjct: 66 GFIASDMTSRHSSTQLWLITHYHEMGSL----------YDYLQLTTLDTVSCLRIVLSIA 115
Query: 157 RGLAFLHEEV-----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST--- 208
GLA LH E+ +P I HRD+K+ NIL+ K+ I+D GLA + + +
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 209 -RVAGTIGYLAPEYAIRG-QVT-----RKADIYSFGVLLVEIV 244
RV GT Y+APE QV ++ DI++FG++L E+
Sbjct: 176 PRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
IG+G FG V++G+ + G+ A+K+ S+ E R +E EI + HEN++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 68
Query: 111 EGN----HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
+ N LV +Y E+ SL L + + ++ + A GLA LH E+
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHMEI 121
Query: 167 -----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS---TRVAGTIGYLA 218
+P I HRD+K+ NIL+ K+ T I+D GLA + + GT Y+A
Sbjct: 122 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 219 PEY------AIRGQVTRKADIYSFGVLLVEIVSGRCN 249
PE + ++ADIY+ G++ EI RC+
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCS 217
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV +K G A+K LS +S K E++++ ++HEN+
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 103 VKLY-----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 113 IGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 165
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 166 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 217
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + DI+S G ++ E+++GR
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
IG+G FG V++G+ + G+ A+K+ S+ E R +E EI + HEN++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 67
Query: 111 EGN----HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
+ N LV +Y E+ SL L + + ++ + A GLA LH E+
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHMEI 120
Query: 167 -----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS---TRVAGTIGYLA 218
+P I HRD+K+ NIL+ K+ T I+D GLA + + GT Y+A
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 219 PEY------AIRGQVTRKADIYSFGVLLVEIVSGRCN 249
PE + ++ADIY+ G++ EI RC+
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCS 216
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L N + + ++ G+ +L E
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 489 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
IG+G FG V++G+ + G+ A+K+ S+ E R +E EI + HEN++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 73
Query: 111 EGN----HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
+ N LV +Y E+ SL L + + ++ + A GLA LH E+
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHMEI 126
Query: 167 -----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS---TRVAGTIGYLA 218
+P I HRD+K+ NIL+ K+ T I+D GLA + + GT Y+A
Sbjct: 127 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 219 PEY------AIRGQVTRKADIYSFGVLLVEIVSGRCN 249
PE + ++ADIY+ G++ EI RC+
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCS 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L N + + ++ G+ +L E
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL------QQNRHVKDKNIIELVHQVSMGMKYLEES 489
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT--IGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A+ + + G + + APE
Sbjct: 490 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 23 EEFSGIHNVKLYSYKELS---IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSA 78
E ++ ++ +K L + D F +G GGFG V+ ++K GK+ A K L+
Sbjct: 161 EFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK 220
Query: 79 ESRQ---GVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGG 135
+ + G + + E ++++++ +V L + + L T++ GG
Sbjct: 221 KRLKKRKGYQGAMVEKKILAKVHSRFIVSL----------AYAFETKTDLCLVMTIMNGG 270
Query: 136 ---HHYSNIQ-----FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLT 187
+H N+ F I GL LH+ +II+RD+K N+LLD D
Sbjct: 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGN 327
Query: 188 PKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
+ISD GLA + A T AGT G++APE + + D ++ GV L E+++ R
Sbjct: 328 VRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 132
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 23 EEFSGIHNVKLYSYKELS---IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSA 78
E ++ ++ +K L + D F +G GGFG V+ ++K GK+ A K L+
Sbjct: 161 EFLDSLYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK 220
Query: 79 ESRQ---GVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGG 135
+ + G + + E ++++++ +V L + + L T++ GG
Sbjct: 221 KRLKKRKGYQGAMVEKKILAKVHSRFIVSL----------AYAFETKTDLCLVMTIMNGG 270
Query: 136 ---HHYSNIQ-----FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLT 187
+H N+ F I GL LH+ +II+RD+K N+LLD D
Sbjct: 271 DIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGN 327
Query: 188 PKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
+ISD GLA + A T AGT G++APE + + D ++ GV L E+++ R
Sbjct: 328 VRISDLGLAVELKAGQTKTKG-YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
IG+G FG V++G+ + G+ A+K+ S+ E R +E EI + HEN++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFIAADN 70
Query: 111 EGN----HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEV 166
+ N LV +Y E+ SL L + + ++ + A GLA LH E+
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYL-------NRYTVTVEGMIKLALSTASGLAHLHMEI 123
Query: 167 -----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS---TRVAGTIGYLA 218
+P I HRD+K+ NIL+ K+ T I+D GLA + + GT Y+A
Sbjct: 124 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 219 PEY------AIRGQVTRKADIYSFGVLLVEIVSGRCN 249
PE + ++ADIY+ G++ EI RC+
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCS 219
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 45 DFSPIN---KIGEGGFGSVYKGRLKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEH 99
DF +N K+ E G ++KGR + I +KVL S + ++F E + H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 100 ENLVKLYGCC--VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
N++ + G C H L+ +++ SL L H +N + + +AR
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVL----HEGTNFVVDQSQAVKFALDMAR 122
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKIS--DFGLAKLIPANMTHVSTRVAGTIG 215
G+AFLH + P I + + ++++D+D+T +IS D + P M + VA
Sbjct: 123 GMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRM-YAPAWVAPEAL 180
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
PE R R AD++SF VLL E+V+
Sbjct: 181 QKKPEDTNR----RSADMWSFAVLLWELVT 206
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 156
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 32/207 (15%)
Query: 52 IGEGGFGSVY--KGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+G G F V+ K RL GK+ A+K + EI V+ +I+HEN+V L
Sbjct: 17 LGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGLAFLHEE 165
H LV L+ GG + I ++ + S + + + +LHE
Sbjct: 76 ESTTHYYLV----------MQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 166 VRPHIIHRDIKASNILLDKDLTPK------ISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
I+HRD+K N+L LTP+ I+DFGL+K+ + + GT GY+AP
Sbjct: 126 ---GIVHRDLKPENLLY---LTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAP 176
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSG 246
E + ++ D +S GV+ ++ G
Sbjct: 177 EVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 43 TDDFSPINKIGEGGFGSVY--KGRLKDGK--IAAIKVLSAESRQGVKEFLTEIQVISEIE 98
+D + + K+G G +G V K +L + I IK S + L E+ V+ +++
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIG 154
H N++KLY + N L + GG + I +FS + I
Sbjct: 63 HPNIMKLYE----------FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 112
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ G +LH + +I+HRD+K N+LL+ +D KI DFGL+ + R+
Sbjct: 113 VLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL- 167
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
GT Y+APE +R + K D++S GV+L ++ G
Sbjct: 168 GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WY 195
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 141
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 142
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 148
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 101/223 (45%), Gaps = 21/223 (9%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + GK A+K++ + +++ E++++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ LV Y + L+ G R + R I + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQY 128
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE- 220
H++ I+HRD+KA N+LLD D+ KI+DFG + + G+ Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPEL 183
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ + + D++S GV+L +VSG LP + Q L E
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 155
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 156 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 51 KIGEGGFGSVYKGRLK---DGKIAAIKVLSAESRQGV--KEFLTEIQVISEIEHENLVKL 105
++G G FG+V KG + K A+K+L E+ E L E V+ ++++ +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
G C E +LV E L + L H + + ++ G+ +L E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD------KNIIELVHQVSMGMKYLEES 130
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPA--NMTHVSTRVAGTIGYLAPEYAI 223
+ +HRD+ A N+LL KISDFGL+K + A N T + + APE
Sbjct: 131 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 224 RGQVTRKADIYSFGVLLVEIVS 245
+ + K+D++SFGVL+ E S
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISE 96
+D++ ++G+G F V + K KI K LSA Q ++ E ++ +
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 60
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI---QFSWRTRSRICI 153
++H N+V+L+ E + LV++ L+ GG + +I +F + CI
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFD----------LVTGGELFEDIVAREFYSEADASHCI 110
Query: 154 G-IARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTR 209
I +A+ H I+HR++K N+LL K K++DFGLA I N +
Sbjct: 111 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG 165
Query: 210 VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
AGT GYL+PE + ++ DI++ GV+L ++ G
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 91 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 143
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 144 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 195
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 133
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 134 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + GK A+K++ + +++ E++++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ LV Y + L+ G R + R I + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQY 128
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE- 220
H++ I+HRD+KA N+LLD D+ KI+DFG + + G+ Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPEL 183
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSG 246
+ + + D++S GV+L +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISE 96
+D++ ++G+G F V + K KI K LSA Q ++ E ++ +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI---QFSWRTRSRICI 153
++H N+V+L+ E + LV++ L+ GG + +I +F + CI
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFD----------LVTGGELFEDIVAREFYSEADASHCI 111
Query: 154 G-IARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTR 209
I +A+ H I+HR++K N+LL K K++DFGLA I N +
Sbjct: 112 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG 166
Query: 210 VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
AGT GYL+PE + ++ DI++ GV+L ++ G
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQ---GVKEFLTEIQVISE 96
+ D F +G GGFG V+ ++K GK+ A K L+ + + G + + E +++++
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGG---HHYSNIQ-----FSWRTR 148
+ +V L + + L T++ GG +H N+ F
Sbjct: 242 VHSRFIVSL----------AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRA 291
Query: 149 SRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST 208
I GL LH+ +II+RD+K N+LLD D +ISD GLA + A T
Sbjct: 292 IFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 209 RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
AGT G++APE + + D ++ GV L E+++ R
Sbjct: 349 -YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 141
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 88
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 89 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 141
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 142 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 193
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 82
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 83 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 135
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 136 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 187
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISE 96
+D++ ++G+G F V + K KI K LSA Q ++ E ++ +
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 61
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI---QFSWRTRSRICI 153
++H N+V+L+ E + LV++ L+ GG + +I +F + CI
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFD----------LVTGGELFEDIVAREFYSEADASHCI 111
Query: 154 G-IARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTR 209
I +A+ H I+HR++K N+LL K K++DFGLA I N +
Sbjct: 112 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG 166
Query: 210 VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
AGT GYL+PE + ++ DI++ GV+L ++ G
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 138
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 142
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 29/209 (13%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIK-VLSAESRQGVKEFLTEIQVISEIEHENLVKL-YGC 108
IG G FG VY+ +L D G++ AIK VL ++ + E+Q++ +++H N+V+L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIVRLRYFF 82
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-----RGLAFLH 163
G + VY L + + T+ HYS + +T I + + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH 139
Query: 164 EEVRPHIIHRDIKASNILLDKDLTP-KISDFGLAKLI---PANMTHVSTRVAGTIGYLAP 219
I HRDIK N+LLD D K+ DFG AK + N++ + +R Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 220 EYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
E T D++S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 147
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 148 GLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ ++F + +G+G FG V + K G+ A+K+L E ++ V LTE +V+
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF-------FHLSRERVFSEDRARFYGAEI 119
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH E ++++RD+K N++LDKD KI+DFGL K + + GT
Sbjct: 120 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPE 176
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 138
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ ++F + +G+G FG V + K G+ A+K+L E ++ V LTE +V+
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF-------FHLSRERVFSEDRARFYGAEI 117
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH E ++++RD+K N++LDKD KI+DFGL K + + GT
Sbjct: 118 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPE 174
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 148
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 133
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 134 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 185
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 148
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 149 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 200
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 147
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 148 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 199
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 138
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + GK A+K++ + +++ E++++ + H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ LV Y + L+ G R + R I + +
Sbjct: 68 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEK---EARAKFR---QIVSAVQY 121
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE- 220
H++ I+HRD+KA N+LLD D+ KI+DFG + + G+ Y APE
Sbjct: 122 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPEL 176
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSG 246
+ + + D++S GV+L +VSG
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVL---SAESRQGVKEFLTEIQVISEIE 98
+D + + K+G G +G V + K G AIK++ S + L E+ V+ +++
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIG 154
H N++KLY + N L + GG + I +FS + I
Sbjct: 80 HPNIMKLYE----------FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 129
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVA 211
+ G +LH + +I+HRD+K N+LL+ +D KI DFGL+ + R+
Sbjct: 130 VLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL- 184
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
GT Y+APE +R + K D++S GV+L ++ G
Sbjct: 185 GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 107 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 159
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 160 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 211
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 132
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ + +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 93
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 94 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 146
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 147 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 198
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ ++F + +G+G FG V + K G+ A+K+L E ++ V LTE +V+
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC-IGI 155
H L L + V Y L H S + R+R I
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELF-------FHLSRERVFSEDRARFYGAEI 118
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
L +LH E ++++RD+K N++LDKD KI+DFGL K + + GT
Sbjct: 119 VSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPE 175
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
YLAPE R D + GV++ E++ GR
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 31/217 (14%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISE 96
+D++ ++G+G F V + K KI K LSA Q ++ E ++ +
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER---EARICRK 84
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI---QFSWRTRSRICI 153
++H N+V+L+ E + LV++ L+ GG + +I +F + CI
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFD----------LVTGGELFEDIVAREFYSEADASHCI 134
Query: 154 G-IARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTR 209
I +A+ H I+HR++K N+LL K K++DFGLA I N +
Sbjct: 135 QQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG 189
Query: 210 VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
AGT GYL+PE + ++ DI++ GV+L ++ G
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 156
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 82 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 134
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 135 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 186
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + GK A+K++ + +++ E++++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ LV Y + L+ G R + R I + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQY 128
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE- 220
H++ I+HRD+KA N+LLD D+ KI+DFG + + G Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPEL 183
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ + + D++S GV+L +VSG LP + Q L E
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
+G+G +G V++G + G+ A+K+ S+ + + +E TE+ + HEN++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 111 EGNHR----ILVYNYLENNSLAQTLIGGGHHYSNIQFS-WRTRS--RICIGIARGLAFLH 163
H L+ +Y E SL Y +Q + T S RI + IA GLA LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSL----------YDYLQLTTLDTVSCLRIVLSIASGLAHLH 122
Query: 164 EEV-----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST----RVAGTI 214
E+ +P I HRD+K+ NIL+ K+ I+D GLA + + + RV GT
Sbjct: 123 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTK 181
Query: 215 GYLAPEYAIRG-QVT-----RKADIYSFGVLLVEIV 244
Y+APE QV ++ DI++FG++L E+
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSA-ESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
+G+G +G V++G + G+ A+K+ S+ + + +E TE+ + HEN++ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 111 EGNHR----ILVYNYLENNSLAQTLIGGGHHYSNIQFS-WRTRS--RICIGIARGLAFLH 163
H L+ +Y E SL Y +Q + T S RI + IA GLA LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSL----------YDYLQLTTLDTVSCLRIVLSIASGLAHLH 151
Query: 164 EEV-----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST----RVAGTI 214
E+ +P I HRD+K+ NIL+ K+ I+D GLA + + + RV GT
Sbjct: 152 IEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTK 210
Query: 215 GYLAPEYAIRG-QVT-----RKADIYSFGVLLVEIV 244
Y+APE QV ++ DI++FG++L E+
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 142
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 155
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 156 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 35/225 (15%)
Query: 45 DFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
DF I IG GGFG V+K + + DGK IK + + + +E ++ +++++H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQF-------SWRTRSR------ 150
GC ++ + + S + L + ++F W + R
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCL------FIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 151 -----ICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH 205
+ I +G+ ++H + +I+RD+K SNI L KI DFGL + +
Sbjct: 122 VLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 178
Query: 206 VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNT 250
R GT+ Y++PE ++ D+Y+ G++L E++ C+T
Sbjct: 179 --XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-VCDT 220
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 138
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 139 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WY 190
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 142
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT +V+TR Y
Sbjct: 143 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG-- 215
GL ++H IIHRD+K SN+ +++D KI DFGLA+ H +AG +
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 186
Query: 216 -YLAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + GK A++++ + +++ E++++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ LV Y + L+ G R + R I + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQY 128
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE- 220
H++ I+HRD+KA N+LLD D+ KI+DFG + + G+ Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPYAAPEL 183
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSG 246
+ + + D++S GV+L +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG-- 215
GL ++H IIHRD+K SN+ +++D KI DFGLA+ H +AG +
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 186
Query: 216 -YLAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 50 NKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISEIEHENLVKL 105
+ +G G FG V G+ + G A+K+L+ + S V + EIQ + H +++KL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
Y + +V Y+ L + G + + R+ I G+ + H
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCH-- 133
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R ++HRD+K N+LLD + KI+DFGL+ ++ G+ Y APE I G
Sbjct: 134 -RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPE-VISG 189
Query: 226 QVTR--KADIYSFGVLLVEIVSG 246
++ + DI+S GV+L ++ G
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCG 212
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 52 IGEGGFGSV-YKGRLKDGKIAAIKVLSAESR-QGVKEFLTEIQVISEIEHENLVKLYGCC 109
IG GGF V + G++ AIK++ + + TEI+ + + H+++ +LY
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
N +V Y L +I S + S + I +A++H +
Sbjct: 78 ETANKIFMVLEYCPGGELFDYII------SQDRLSEEETRVVFRQIVSAVAYVHSQ---G 128
Query: 170 IIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ--V 227
HRD+K N+L D+ K+ DFGL N + G++ Y APE I+G+ +
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPE-LIQGKSYL 187
Query: 228 TRKADIYSFGVLLVEIVSG 246
+AD++S G+LL ++ G
Sbjct: 188 GSEADVWSMGILLYVLMCG 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 47 SPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENLV 103
SP + +G G +GSV K G+ AIK LS +S K E+ ++ ++HEN++
Sbjct: 46 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 104
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
L + Y++ QT + ++FS + + +GL ++H
Sbjct: 105 GLLDVFTPASSLRNFYDFYLVMPFMQTDL---QKIMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGYLAPEYA 222
++HRD+K N+ +++D KI DFGLA+ A MT +V TR Y APE
Sbjct: 162 SA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVI 213
Query: 223 IRG-QVTRKADIYSFGVLLVEIVSGRC 248
+ + DI+S G ++ E+++G+
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 15/206 (7%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + GK A++++ + +++ E++++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ LV Y + L+ G R + R I + +
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQY 128
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE- 220
H++ I+HRD+KA N+LLD D+ KI+DFG + + G+ Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPEL 183
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSG 246
+ + + D++S GV+L +VSG
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 105/212 (49%), Gaps = 18/212 (8%)
Query: 42 ATDDFSPINK---IGEGGFGSVYK-GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI 97
A + F ++K +G G FG V+K G A K++ + +E EI V++++
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 98 EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+H NL++LY N +LV Y++ L +I ++ + + + +IC GI
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELD-TILFMKQICEGIRH 202
Query: 158 GLAFLHEEVRPHIIHRDIKASNIL-LDKDLTP-KISDFGLA-KLIPANMTHVSTRVAGTI 214
+H+ +I+H D+K NIL +++D KI DFGLA + P V+ GT
Sbjct: 203 ----MHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTP 252
Query: 215 GYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+LAPE V+ D++S GV+ ++SG
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 132
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG-- 215
GL ++H IIHRD+K SN+ +++D KI DFGLA+ H +AG +
Sbjct: 133 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 182
Query: 216 -YLAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
Y APE + + DI+S G ++ E+++GR
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 27/219 (12%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHENLVKLYGC 108
IG+G F V R + G+ A+K++ + +++ E++++ + H N+VKL+
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRP 168
LV Y + L+ G R + R I + + H++
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR---QIVSAVQYCHQK--- 133
Query: 169 HIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV---AGTIGYLAPE-YAIR 224
+I+HRD+KA N+LLD D+ KI+DFG +N V ++ G+ Y APE + +
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGF-----SNEFTVGNKLDTFCGSPPYAAPELFQGK 188
Query: 225 GQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ D++S GV+L +VSG LP + Q L E
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 17/207 (8%)
Query: 47 SPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENLV 103
SP + +G G +GSV K G+ AIK LS +S K E+ ++ ++HEN++
Sbjct: 28 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVI 86
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
L + Y++ QT + ++FS + + +GL ++H
Sbjct: 87 GLLDVFTPASSLRNFYDFYLVMPFMQTDL---QKIMGLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGYLAPEYA 222
++HRD+K N+ +++D KI DFGLA+ A MT +V TR Y APE
Sbjct: 144 SA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVI 195
Query: 223 IRG-QVTRKADIYSFGVLLVEIVSGRC 248
+ + DI+S G ++ E+++G+
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ MT V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 102/212 (48%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI D+GLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 19/228 (8%)
Query: 34 YSYKELSIATDDFSPINKIGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKE 86
Y + D + +G G FG V + + + A+K+L + +
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 87 FLTEIQVISEIEHE-NLVKLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHH---YSNI 141
++E++++ I H N+V L G C + G +++ + + +L+ L + Y ++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 142 QFSWRTRSR-ICIG--IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKL 198
+ T IC +A+G+ FL IHRD+ A NILL + KI DFGLA+
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARD 193
Query: 199 IPANMTHVSTRVAG-TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I + +V A + ++APE T ++D++SFGVLL EI S
Sbjct: 194 IYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGL + MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + +AGT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLAGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 19/210 (9%)
Query: 45 DFSPINKIGEGGFGSVY-KGRLKDGKIAAIKVLSAE---SRQGVKEFLTEIQVISEIEHE 100
DF+ + +G+G FG V R ++ AIK+L + V+ + E +V++ ++
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 101 N-LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI-QFSWRTRSRICIGIARG 158
L +L+ C + V Y+ L +H + +F I+ G
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLM-------YHIQQVGKFKEPQAVFYAAEISIG 132
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTR-VAGTIGYL 217
L FLH+ II+RD+K N++LD + KI+DFG+ K M V+TR GT Y+
Sbjct: 133 LFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYI 187
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
APE + D +++GVLL E+++G+
Sbjct: 188 APEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 66/311 (21%)
Query: 52 IGEGGFGSVYK----GRLKD--GKIAAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G +K A+K+L + +E ++E++V+S + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTR-SRIC---------- 152
L G C G +++ Y L + F R R S IC
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDL-------------LNFLRRKRDSFICSKTSPAIMED 160
Query: 153 --------------IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKL 198
+A+G+AFL + + IHRD+ A NILL KI DFGLA+
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARH 217
Query: 199 IPANMTHVSTRVAG-TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTE 257
I + +V A + ++APE T ++D++S+G+ L E+ S + +P +
Sbjct: 218 IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 277
Query: 258 EQYLLERTWDLYERRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQ 317
++ ++I L+ + E +K C P RP+ +VQ
Sbjct: 278 SKFY-----------KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQ 323
Query: 318 MLMGEKDIDDD 328
++ EK I +
Sbjct: 324 LI--EKQISES 332
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 49 INKIGEGGFGSV---YKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENLV 103
+ +G G +GSV Y RL+ + A+K LS +S + E++++ ++HEN++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 104 KLY-----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
L +E + + L L + ++QF + + RG
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-------LVYQLLRG 143
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGYL 217
L ++H IIHRD+K SN+ +++D +I DFGLA+ MT +V+TR Y
Sbjct: 144 LKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYR 195
Query: 218 APEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E++ G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 49 INKIGEGGFGSV---YKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENLV 103
+ +G G +GSV Y RL+ + A+K LS +S + E++++ ++HEN++
Sbjct: 25 LRPVGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 82
Query: 104 KLY-----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
L +E + + L L + ++QF + + RG
Sbjct: 83 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-------LVYQLLRG 135
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGYL 217
L ++H IIHRD+K SN+ +++D +I DFGLA+ MT +V+TR Y
Sbjct: 136 LKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYR 187
Query: 218 APEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E++ G+
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 27/226 (11%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQ--GVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + G+ AIK++ +++ E++++ + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ L+ Y + L+ G R++ R I + +
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKFR---QIVSAVQY 129
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG---YLA 218
H++ I+HRD+KA N+LLD D+ KI+DFG +N V ++ G Y A
Sbjct: 130 CHQK---RIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTVGGKLDAFCGAPPYAA 181
Query: 219 PE-YAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
PE + + + D++S GV+L +VSG LP + Q L E
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQ--GVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + G+ AIK++ +++ E++++ + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ L+ Y + L+ G R++ R I + +
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKFR---QIVSAVQY 126
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV---AGTIGYLA 218
H++ I+HRD+KA N+LLD D+ KI+DFG +N V ++ G+ Y A
Sbjct: 127 CHQK---RIVHRDLKAENLLLDADMNIKIADFGF-----SNEFTVGGKLDTFCGSPPYAA 178
Query: 219 PE-YAIRGQVTRKADIYSFGVLLVEIVSG 246
PE + + + D++S GV+L +VSG
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE---SRQGVKEFLTEIQVIS 95
S+ DF + IG G + V RLK +I A+KV+ E + + TE V
Sbjct: 1 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 60
Query: 96 EI-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
+ H LV L+ C + V Y+ L H +
Sbjct: 61 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM------FHMQRQRKLPEEHARFYSAE 114
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK--LIPANMTHVSTRVAG 212
I+ L +LHE II+RD+K N+LLD + K++D+G+ K L P + T + G
Sbjct: 115 ISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCG 168
Query: 213 TIGYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSGRC 248
T Y+APE +RG+ D ++ GVL+ E+++GR
Sbjct: 169 TPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGRS 204
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHH---YSNIQFSWRTRSRI---CIGIA 156
L G C + G +++ + + +L+ L + Y ++ + T + +A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-TIG 215
+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A +
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYERRELI 275
++APE T ++D++SFGVLL EI S + + +E+ + RR
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---------FXRR--- 259
Query: 276 LLVDTSLNG-DFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQML 319
L T + D+ E + + L C P RP+ S +V+ L
Sbjct: 260 LKEGTRMRAPDYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 21/216 (9%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE---SRQGVKEFLTEIQVIS 95
S+ DF + IG G + V RLK +I A+KV+ E + + TE V
Sbjct: 16 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 75
Query: 96 EIE-HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
+ H LV L+ C + V Y+ L H +
Sbjct: 76 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM------FHMQRQRKLPEEHARFYSAE 129
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK--LIPANMTHVSTRVAG 212
I+ L +LHE II+RD+K N+LLD + K++D+G+ K L P + T + G
Sbjct: 130 ISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCG 183
Query: 213 TIGYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
T Y+APE +RG+ D ++ GVL+ E+++GR
Sbjct: 184 TPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG-KIAAIK-VLSAESRQGV-KEFLTEIQVISEIEHENL 102
+ + KIGEG +G+V+K + ++ +I A+K V + +GV L EI ++ E++H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 103 VKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFL 162
V+L+ LV+ + + + + N + +GL F
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQD------LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYA 222
H +++HRD+K N+L++++ K++DFGLA+ + S V T+ Y P+
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVL 173
Query: 223 IRGQV-TRKADIYSFGVLLVEIVSG 246
++ + D++S G + E+ +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 105/269 (39%), Gaps = 74/269 (27%)
Query: 45 DFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENL 102
DF PI +G GGFG V++ + K D AIK + +R+ +E + E++ ++++EH +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 103 VKLYGCCV--------EGNHRILVYN-------------------------YLENNSLAQ 129
V+ + + E I + + + N++ Q
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 130 TLIGGGHHYSNIQFS---------WRTRS------------RICIGIARGLAFLHEEVRP 168
Y IQ W R I I IA + FLH +
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK--- 183
Query: 169 HIIHRDIKASNILLDKDLTPKISDFGLAKL-------------IPANMTHVSTRVAGTIG 215
++HRD+K SNI D K+ DFGL +PA TH GT
Sbjct: 184 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ--VGTKL 241
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIV 244
Y++PE + K DI+S G++L E++
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 40/298 (13%)
Query: 52 IGEGGFGSVYK----GRLKD--GKIAAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G +K A+K+L + +E ++E++V+S + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFS------------WRTRSRI 151
L G C G +++ Y L L + + S
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+A+G+AFL + + IHRD+ A NILL KI DFGLA+ I + +V A
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 212 G-TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYE 270
+ ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------- 258
Query: 271 RRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDD 328
++I L+ + E +K C P RP+ +VQ++ EK I +
Sbjct: 259 --KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI--EKQISES 309
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 40/298 (13%)
Query: 52 IGEGGFGSVYK----GRLKD--GKIAAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G +K A+K+L + +E ++E++V+S + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFS------------WRTRSRI 151
L G C G +++ Y L L + + S
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+A+G+AFL + + IHRD+ A NILL KI DFGLA+ I + +V A
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 212 G-TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYE 270
+ ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------- 281
Query: 271 RRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDD 328
++I L+ + E +K C P RP+ +VQ++ EK I +
Sbjct: 282 --KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI--EKQISES 332
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 107 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 159
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DFGLA+ M +V+TR Y
Sbjct: 160 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WY 211
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E+++GR
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 40/298 (13%)
Query: 52 IGEGGFGSVYK----GRLKD--GKIAAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G +K A+K+L + +E ++E++V+S + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFS------------WRTRSRI 151
L G C G +++ Y L L + + S
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+A+G+AFL + + IHRD+ A NILL KI DFGLA+ I + +V A
Sbjct: 169 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 212 G-TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYE 270
+ ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------- 276
Query: 271 RRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDD 328
++I L+ + E +K C P RP+ +VQ++ EK I +
Sbjct: 277 --KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI--EKQISES 327
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLT---EIQVISEIEHENLVKLYG 107
+G GG V+ R L+ + A+KVL A+ + +L E Q + + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 108 C----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
G +V Y++ +L + ++ + + + + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSH 133
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEY 221
+ IIHRD+K +NI++ K+ DFG+A+ I N + V GT YL+PE
Sbjct: 134 QN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
A V ++D+YS G +L E+++G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 126/298 (42%), Gaps = 40/298 (13%)
Query: 52 IGEGGFGSVYK----GRLKD--GKIAAIKVLSAESRQGVKE-FLTEIQVISEI-EHENLV 103
+G G FG V + G +K A+K+L + +E ++E++V+S + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFS------------WRTRSRI 151
L G C G +++ Y L L + + S
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+A+G+AFL + + IHRD+ A NILL KI DFGLA+ I + +V A
Sbjct: 167 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 212 G-TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLERTWDLYE 270
+ ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY--------- 274
Query: 271 RRELILLVDTSLNGDFDAEEACRFLKVGLLCTQDTPKLRPSMSTVVQMLMGEKDIDDD 328
++I L+ + E +K C P RP+ +VQ++ EK I +
Sbjct: 275 --KMIKEGFRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLI--EKQISES 325
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 156
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG-- 215
GL ++H IIHRD+K SN+ +++D KI DFGLA+ H + G +
Sbjct: 157 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATR 206
Query: 216 -YLAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
Y APE + + DI+S G ++ E+++GR
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI DF LA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 49 INKIGEGGFGSV---YKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENLV 103
+ +G G +GSV Y RL+ + A+K LS +S + E++++ ++HEN++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI 90
Query: 104 KLY-----GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
L +E + + L L + ++QF + + RG
Sbjct: 91 GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-------LVYQLLRG 143
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGYL 217
L ++H IIHRD+K SN+ +++D +I DFGLA+ MT +V+TR Y
Sbjct: 144 LKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYR 195
Query: 218 APEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
APE + + DI+S G ++ E++ G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 52 IGEGGFGSVYKGRL----KDGKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G AIK + V+E FL E + + +H ++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ---FSWRTRSRICIG--IARGLAF 161
G E I++ L G S +Q FS S I ++ LA+
Sbjct: 458 GVITENPVWIIM-----------ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L + +HRDI A N+L+ + K+ DFGL++ + + + +++ I ++APE
Sbjct: 507 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 222 AIRGQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVL--SAESRQGVKEFLTEIQVISEIEHE 100
D++ I IG G +G V R + G+ AIK + + + K L E++++ +H+
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 101 NLVKL---------YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
N++ + YG E +V + +E++ L Q + +S+ +
Sbjct: 115 NIIAIKDILRPTVPYG---EFKSVYVVLDLMESD-LHQII------HSSQPLTLEHVRYF 164
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVST 208
+ RGL ++H +IHRD+K SN+L++++ KI DFG+A+ + PA + T
Sbjct: 165 LYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 209 RVAGTIGYLAPEYAIR-GQVTRKADIYSFGVLLVEIVSGR 247
T Y APE + + T+ D++S G + E+++ R
Sbjct: 222 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 102/219 (46%), Gaps = 24/219 (10%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRL----KDGKIAAIKVLS----AESRQGVKEFLTEIQ 92
+ ++F + +G G +G V+ R GK+ A+KVL + + + TE Q
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 93 VISEIEHEN-LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
V+ I LV L+ L+ +Y+ L H S + +I
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFT-------HLSQRERFTEHEVQI 163
Query: 152 CIG-IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV 210
+G I L LH + II+RDIK NILLD + ++DFGL+K A+ T +
Sbjct: 164 YVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 220
Query: 211 AGTIGYLAPEYAIRGQVT---RKADIYSFGVLLVEIVSG 246
GTI Y+AP+ +RG + + D +S GVL+ E+++G
Sbjct: 221 CGTIEYMAPD-IVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 29/220 (13%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVL--SAESRQGVKEFLTEIQVISEIEHE 100
D++ I IG G +G V R + G+ AIK + + + K L E++++ +H+
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 101 NLVKL---------YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRI 151
N++ + YG E +V + +E++ L Q + +S+ +
Sbjct: 114 NIIAIKDILRPTVPYG---EFKSVYVVLDLMESD-LHQII------HSSQPLTLEHVRYF 163
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVST 208
+ RGL ++H +IHRD+K SN+L++++ KI DFG+A+ + PA + T
Sbjct: 164 LYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 209 RVAGTIGYLAPEYAIR-GQVTRKADIYSFGVLLVEIVSGR 247
T Y APE + + T+ D++S G + E+++ R
Sbjct: 221 EYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVK---EFLTEIQVISEIEHENLVKLYG 107
+G GG V+ R L+ + A+KVL A+ + F E Q + + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 108 C----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
G +V Y++ +L + ++ + + + + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSH 133
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEY 221
+ IIHRD+K +NI++ K+ DFG+A+ I N + V GT YL+PE
Sbjct: 134 QN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
A V ++D+YS G +L E+++G
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I IG G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ K++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------ICIG 154
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 155 --IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 213 -TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI FGLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 45 DFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHEN 101
++ + IG+G F V R + GK A+K++ + +++ E+++ + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+VKL+ LV Y + L+ G R + R I + +
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK---EARAKFR---QIVSAVQY 128
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE- 220
H++ I+HRD+KA N+LLD D KI+DFG + + G Y APE
Sbjct: 129 CHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPEL 183
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ + + D++S GV+L +VSG LP + Q L E
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKE 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI D GLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 52 IGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEFLT---EIQVISEIEHENLVKLYG 107
+G GG V+ R L+ + A+KVL A+ + +L E Q + + H +V +Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 108 C----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
G +V Y++ +L + ++ + + + + L F H
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEVIADACQALNFSH 150
Query: 164 EEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP--ANMTHVSTRVAGTIGYLAPEY 221
+ IIHRD+K +NI++ K+ DFG+A+ I N + V GT YL+PE
Sbjct: 151 QN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 207
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
A V ++D+YS G +L E+++G
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 52 IGEGGFGSVYKGRL----KDGKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G AIK + V+E FL E + + +H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ---FSWRTRSRICIG--IARGLAF 161
G E I++ L G S +Q FS S I ++ LA+
Sbjct: 78 GVITENPVWIIM-----------ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L + +HRDI A N+L+ + K+ DFGL++ + + +++ I ++APE
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
Query: 222 AIRGQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 21/216 (9%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE---SRQGVKEFLTEIQVIS 95
S+ DF + IG G + V RLK +I A++V+ E + + TE V
Sbjct: 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFE 107
Query: 96 EIE-HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
+ H LV L+ C + V Y+ L H +
Sbjct: 108 QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM------FHMQRQRKLPEEHARFYSAE 161
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK--LIPANMTHVSTRVAG 212
I+ L +LHE II+RD+K N+LLD + K++D+G+ K L P + T + G
Sbjct: 162 ISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCG 215
Query: 213 TIGYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSGR 247
T Y+APE +RG+ D ++ GVL+ E+++GR
Sbjct: 216 TPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 27 GIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKD------GKIAAIKVLSAES 80
G N+ + TDD+ ++G+G F V + K KI K LSA
Sbjct: 14 GTENLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARD 73
Query: 81 RQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSN 140
Q ++ E ++ ++H N+V+L+ E LV++ + L + ++ +YS
Sbjct: 74 HQKLER---EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSE 129
Query: 141 IQFSWRTRSRICI-GIARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLA 196
S CI I + +H+ I+HRD+K N+LL K K++DFGLA
Sbjct: 130 ADAS------HCIHQILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
Query: 197 KLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ AGT GYL+PE + + DI++ GV+L ++ G
Sbjct: 181 IEVQGEQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I IG G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y+ GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMP----------GGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ K++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 138 VLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPE 190
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------ICIG 154
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 155 --IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 192 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 213 -TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 41 IATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE---SRQGVKEFLTEIQVISE 96
+ DF + IG G + V RLK +I A+KV+ E + + TE V +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 97 I-EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
H LV L+ C + V Y+ L H + I
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLM------FHMQRQRKLPEEHARFYSAEI 119
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK--LIPANMTHVSTRVAGT 213
+ L +LHE II+RD+K N+LLD + K++D+G+ K L P + T + GT
Sbjct: 120 SLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGT 173
Query: 214 IGYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSGRC 248
Y+APE +RG+ D ++ GVL+ E+++GR
Sbjct: 174 PNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGRS 208
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------IC-- 152
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + V A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 213 -TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 52 IGEGGFGSVYKGRL----KDGKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G AIK + V+E FL E + + +H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 107 GCCVEGNHRILV--YNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G E I++ E S Q S I ++++ ++ LA+L
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--------LSTALAYLES 129
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
+ +HRDI A N+L+ + K+ DFGL++ + + + +++ I ++APE
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 225 GQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I IG G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y+ GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMP----------GGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ K++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLXGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +KE L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ K++DFGLAK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 52 IGEGGFGSVYKGRLKD----GKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G AIK + V+E FL E + + +H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ---FSWRTRSRICIG--IARGLAF 161
G E I++ L G S +Q FS S I ++ LA+
Sbjct: 78 GVITENPVWIIM-----------ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 126
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L + +HRDI A N+L+ K+ DFGL++ + + + +++ I ++APE
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 222 AIRGQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 22/215 (10%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKG--RLKDGKIAAIKVLSAESRQGVK-EFLTEIQVISE 96
+ + D + I K+GEG +G VYK + + +A ++ +GV + E+ ++ E
Sbjct: 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 97 IEHENLVKLYGCCVEGNHRI-LVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
++H N+++L + NHR+ L++ Y EN+ + N S R +
Sbjct: 90 LQHRNIIEL-KSVIHHNHRLHLIFEYAENDL-------KKYMDKNPDVSMRVIKSFLYQL 141
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTP--KISDFGLAKLIPANMTHVSTRV 210
G+ F H +HRD+K N+LL D TP KI DFGLA+ + + +
Sbjct: 142 INGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI 198
Query: 211 AGTIGYLAPEYAIRGQ-VTRKADIYSFGVLLVEIV 244
T+ Y PE + + + DI+S + E++
Sbjct: 199 I-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 52 IGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCV 110
+GEG F K K A A+K++S ++ +T +++ H N+VKL+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFH 76
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHI 170
+ H LV L L + I H+S + S+ R + ++ +H+ +
Sbjct: 77 DQLHTFLVMELLNGGELFER-IKKKKHFSETEASYIMRK-----LVSAVSHMHD---VGV 127
Query: 171 IHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQV 227
+HRD+K N+L + +L KI DFG A+L P + + T T+ Y APE +
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 228 TRKADIYSFGVLLVEIVSGR 247
D++S GV+L ++SG+
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------ICIG 154
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 155 --IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 213 -TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI D GLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 20/217 (9%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAES---RQGVKEFLTEIQVI 94
L + +D+ + IG G FG V R K K+ A+K+LS R F E ++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
+ +V+L+ + + +V Y+ L + SN +
Sbjct: 130 AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM-------SNYDVPEKWAKFYTAE 182
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGT 213
+ L +H +IHRD+K N+LLDK K++DFG K+ M H T V GT
Sbjct: 183 VVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GT 238
Query: 214 IGYLAPEY----AIRGQVTRKADIYSFGVLLVEIVSG 246
Y++PE G R+ D +S GV L E++ G
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 52 IGEGGFGSVYKGRLKDGK----IAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G + AIK + V+E FL E + + +H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 107 GCCVEGNHRILV--YNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G E I++ E S Q S I ++++ ++ LA+L
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--------LSTALAYLES 129
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
+ +HRDI A N+L+ + K+ DFGL++ + + + +++ I ++APE
Sbjct: 130 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 225 GQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 172 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG----ATWTLCGTPE 224
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE I + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHE 100
+ DF + +GEG +G V K G+I AIK + + L EI+++ +HE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 101 NLVKLYGC----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGI 155
N++ ++ E + + + L L + + +IQ F ++T
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT-------- 121
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---------PANMTHV 206
R + LH ++IHRD+K SN+L++ + K+ DFGLA++I P
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 207 STRVAGTIGYLAPEYAI-RGQVTRKADIYSFGVLLVEIVSGR 247
T T Y APE + + +R D++S G +L E+ R
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGV-----KEFLTEIQ 92
+ IA +D +GEG FG VY+G + K I V ++ ++F++E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 77
Query: 93 VISEIEHENLVKLYGCCVEGNHRILV--YNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
++ ++H ++VKL G E I++ Y Y E GH+ + S + +
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGE----------LGHYLERNKNSLKVLTL 127
Query: 151 I--CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST 208
+ + I + +A+L + +HRDI NIL+ K+ DFGL++ I + ++
Sbjct: 128 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 184
Query: 209 RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I +++PE + T +D++ F V + EI+S
Sbjct: 185 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGV-----KEFLTEIQ 92
+ IA +D +GEG FG VY+G + K I V ++ ++F++E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 65
Query: 93 VISEIEHENLVKLYGCCVEGNHRIL--VYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
++ ++H ++VKL G E I+ +Y Y E GH+ + S + +
Sbjct: 66 IMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGE----------LGHYLERNKNSLKVLTL 115
Query: 151 I--CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST 208
+ + I + +A+L + +HRDI NIL+ K+ DFGL++ I + ++
Sbjct: 116 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 172
Query: 209 RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I +++PE + T +D++ F V + EI+S
Sbjct: 173 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 22/217 (10%)
Query: 38 ELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGV-----KEFLTEIQ 92
+ IA +D +GEG FG VY+G + K I V ++ ++F++E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 93 VISEIEHENLVKLYGCCVEGNHRIL--VYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR 150
++ ++H ++VKL G E I+ +Y Y E GH+ + S + +
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGE----------LGHYLERNKNSLKVLTL 111
Query: 151 I--CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST 208
+ + I + +A+L + +HRDI NIL+ K+ DFGL++ I + ++
Sbjct: 112 VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKAS 168
Query: 209 RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
I +++PE + T +D++ F V + EI+S
Sbjct: 169 VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 52 IGEGGFGSVYKGRL----KDGKIAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G AIK + V+E FL E + + +H ++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 107 GCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ---FSWRTRSRICIG--IARGLAF 161
G E I++ L G S +Q FS S I ++ LA+
Sbjct: 458 GVITENPVWIIM-----------ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEY 221
L + +HRDI A N+L+ K+ DFGL++ + + + +++ I ++APE
Sbjct: 507 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 222 AIRGQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------ICIG 154
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 155 --IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 213 -TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHE 100
+ DF + +GEG +G V K G+I AIK + + L EI+++ +HE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 101 NLVKLYGC----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGI 155
N++ ++ E + + + L L + + +IQ F ++T
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT-------- 121
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---------PANMTHV 206
R + LH ++IHRD+K SN+L++ + K+ DFGLA++I P
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 207 STRVAGTIGYLAPEYAI-RGQVTRKADIYSFGVLLVEIVSGR 247
T T Y APE + + +R D++S G +L E+ R
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 52 IGEGGFGSVYKGRLKDGK----IAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G + AIK + V+E FL E + + +H ++VKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 107 GCCVEGNHRILV--YNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G E I++ E S Q S I ++++ ++ LA+L
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--------LSTALAYLES 126
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
+ +HRDI A N+L+ + K+ DFGL++ + + + +++ I ++APE
Sbjct: 127 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 183
Query: 225 GQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------ICIG 154
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 155 --IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 157 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 213 -TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 52 IGEGGFGSVYKGRLKDGK----IAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G + AIK + V+E FL E + + +H ++VKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 107 GCCVEGNHRILV--YNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G E I++ E S Q S I ++++ ++ LA+L
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--------LSTALAYLES 157
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
+ +HRDI A N+L+ + K+ DFGL++ + + + +++ I ++APE
Sbjct: 158 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 214
Query: 225 GQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 52 IGEGGFGSVYKGRLKDGK----IAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G + AIK + V+E FL E + + +H ++VKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 107 GCCVEGNHRILV--YNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G E I++ E S Q S I ++++ ++ LA+L
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--------LSTALAYLES 134
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
+ +HRDI A N+L+ + K+ DFGL++ + + + +++ I ++APE
Sbjct: 135 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 191
Query: 225 GQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 144 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 196
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------ICIG 154
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 155 --IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---PANMTHVSTR 209
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I P + R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 210 VAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ + ++APE T ++D++SFGVLL EI S
Sbjct: 212 LP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 25/212 (11%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ ++ +G G +GSV K G A+K LS +S K E++++ ++HEN+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + + +L L + ++QF + I R
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-------LIYQILR 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIGY 216
GL ++H IIHRD+K SN+ +++D KI D GLA+ MT +V+TR Y
Sbjct: 137 GLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WY 188
Query: 217 LAPEYAIRG-QVTRKADIYSFGVLLVEIVSGR 247
APE + + DI+S G ++ E+++GR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%), Gaps = 23/227 (10%)
Query: 44 DDFSPINKIGEGGFGSVYKGRL-KDGKIAAIKVLS-AESRQGVKEFLTEIQVI-SEIEHE 100
+D + ++G G G V+K R K G + A+K + + +++ K L ++ V+ +
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
+V+ +G + + + + A+ L R ++ + I + L
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKL----KKRMQGPIPERILGKMTVAIVKALY 138
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPE 220
+L E + +IHRD+K SNILLD+ K+ DFG++ + + R AG Y+APE
Sbjct: 139 YLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDRSAGCAAYMAPE 194
Query: 221 YAIRGQVTR-----KADIYSFGVLLVEIVSGR-----CNTNMRLPTE 257
T+ +AD++S G+ LVE+ +G+ C T+ + T+
Sbjct: 195 RIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 52 IGEGGFGSVYKGRLKDGK----IAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G + AIK + V+E FL E + + +H ++VKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 107 GCCVEGNHRILV--YNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G E I++ E S Q S I ++++ ++ LA+L
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--------LSTALAYLES 131
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
+ +HRDI A N+L+ + K+ DFGL++ + + + +++ I ++APE
Sbjct: 132 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 188
Query: 225 GQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 52 IGEGGFGSVYKGRLKDGK----IAAIKVLSAESRQGVKE-FLTEIQVISEIEHENLVKLY 106
IGEG FG V++G + AIK + V+E FL E + + +H ++VKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 107 GCCVEGNHRILV--YNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHE 164
G E I++ E S Q S I ++++ ++ LA+L
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--------LSTALAYLES 132
Query: 165 EVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
+ +HRDI A N+L+ + K+ DFGL++ + + + +++ I ++APE
Sbjct: 133 K---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINF 189
Query: 225 GQVTRKADIYSFGVLLVEIV 244
+ T +D++ FGV + EI+
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 100/205 (48%), Gaps = 14/205 (6%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDG-KIAAIK-VLSAESRQGV-KEFLTEIQVISEIEHENL 102
+ + KIGEG +G+V+K + ++ +I A+K V + +GV L EI ++ E++H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 103 VKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFL 162
V+L+ LV+ + + + + N + +GL F
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQD------LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYA 222
H +++HRD+K N+L++++ K+++FGLA+ + S V T+ Y P+
Sbjct: 118 HSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVL 173
Query: 223 IRGQV-TRKADIYSFGVLLVEIVSG 246
++ + D++S G + E+ +
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 25/207 (12%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAI------KVLSAESRQGVKEFLTEIQVISEIEHENLVK 104
+IG G F +VYKG + + + L+ RQ KE E + + ++H N+V+
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVR 89
Query: 105 LYGC---CVEGNHRILVYNYLENNSLAQTLIGGGHHYS-NIQFSWRTRSRICIGIARGLA 160
Y V+G I++ L + +T + + SW C I +GL
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQ 143
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDL-TPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
FLH P IIHRD+K NI + + KI D GLA L A+ V GT + AP
Sbjct: 144 FLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA---VIGTPEFXAP 199
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSG 246
E + D+Y+FG +E +
Sbjct: 200 E-XYEEKYDESVDVYAFGXCXLEXATS 225
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 105/231 (45%), Gaps = 22/231 (9%)
Query: 34 YSYKELSIATDDFSPINKIGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKE 86
Y + D + +G G FG V + + + A+K+L + +
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 87 FLTEIQVISEIEHE-NLVKLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHY------ 138
++E++++ I H N+V L G C + G +++ + + +L+ L + +
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 139 SNIQFSWRTRSR-ICIG--IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGL 195
++ + T IC +A+G+ FL IHRD+ A NILL + KI DFGL
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGL 194
Query: 196 AKLIPANMTHVSTRVAG-TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
A+ I + V A + ++APE T ++D++SFGVLL EI S
Sbjct: 195 ARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------ICIG 154
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 155 --IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + V A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 213 -TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTL--IGGGHHYSNIQ----FSWRTRSRICI 153
LVKL Y++ +N++L + + GG +S+++ FS
Sbjct: 101 PFLVKL------------EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I +LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTL--IGGGHHYSNIQ----FSWRTRSRICI 153
LVKL Y++ +N++L + + GG +S+++ FS
Sbjct: 101 PFLVKL------------EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I +LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 29/213 (13%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTL--IGGGHHYSNIQ----FSWRTRSRICI 153
LVKL Y++ +N++L + + GG +S+++ FS
Sbjct: 101 PFLVKL------------EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 154 GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGT 213
I +LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 149 QIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGT 201
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 23/214 (10%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR--------ICIG 154
L G C + G +++ + + +L+ L + + + + + IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 155 --IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + V A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 213 -TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 39/217 (17%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSAESRQG-VKEFLTEIQVISEIEHENLVKLYGCCV 110
+G+G +G V++G L G+ A+K+ S+ Q +E TEI + H+N++
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGF----- 67
Query: 111 EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS--------RICIGIARGLAFL 162
+ + NS Q + +H + + R R+ + A GLA L
Sbjct: 68 ------IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHL 121
Query: 163 HEEV-----RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV----STRVAGT 213
H E+ +P I HRD K+ N+L+ +L I+D GLA + ++ + RV GT
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GT 180
Query: 214 IGYLAPEY---AIRG---QVTRKADIYSFGVLLVEIV 244
Y+APE IR + + DI++FG++L EI
Sbjct: 181 KRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 34/242 (14%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
+D F +++G G VY+ + K K A+KVL + + TEI V+ + H N
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHPN 109
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIAR 157
++KL ++ SL L+ GG + I +S R + I
Sbjct: 110 IIKLKE----------IFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILE 159
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDK---DLTPKISDFGLAKLIPANMTHVSTRVAGTI 214
+A+LHE I+HRD+K N+L D KI+DFGL+K++ + + V GT
Sbjct: 160 AVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTP 214
Query: 215 GYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG-------RCNTNM--RLPTEEQYLLERT 265
GY APE + D++S G++ ++ G R + M R+ E Y +
Sbjct: 215 GYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPW 274
Query: 266 WD 267
WD
Sbjct: 275 WD 276
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE-SRQGVKEFLTEIQV- 93
+ + DD PI ++G G +G V K R + G+I A+K + A + Q K L ++ +
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 94 ISEIEHENLVKLYGCCV-EGNHRILVYNYLENNSL----AQTLIGGGHHYSNIQFSWRTR 148
+ ++ V YG EG+ + + L + SL Q + G +I
Sbjct: 104 MRTVDCPFTVTFYGALFREGD--VWICMELMDTSLDKFYKQVIDKGQTIPEDI------L 155
Query: 149 SRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST 208
+I + I + L LH ++ +IHRD+K SN+L++ K+ DFG++ + ++ T
Sbjct: 156 GKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--KT 211
Query: 209 RVAGTIGYLAPEYAIRGQVTR-----KADIYSFGVLLVEIV 244
AG Y+APE I ++ + K+DI+S G+ ++E+
Sbjct: 212 IDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELA 251
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 137 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPE 189
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 100/212 (47%), Gaps = 21/212 (9%)
Query: 52 IGEGGFGSVYKG------RLKDGKIAAIKVLS-AESRQGVKEFLTEIQVISEIEHE-NLV 103
+G G FG V + + + A+K+L + + ++E++++ I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 104 KLYGCCVE-GNHRILVYNYLENNSLAQTLIGGGHHY-----SNIQFSWRTRSRI---CIG 154
L G C + G +++ + + +L+ L + + ++ + T +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-T 213
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + V A
Sbjct: 157 VAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 45 DFSPINKIGEGGFGSV------YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE 98
++ + +GEG FG V G+ KI KVL+ QG E EI + +
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H +++KLY + I+V Y N L ++ + S + R I
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIV------QRDKMSEQEARRFFQQIISA 115
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYL 217
+ + H R I+HRD+K N+LLD+ L KI+DFGL+ ++ N S G+ Y
Sbjct: 116 VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYA 169
Query: 218 APEYAIRGQVTR--KADIYSFGVLLVEIVSGR 247
APE I G++ + D++S GV+L ++ R
Sbjct: 170 APE-VISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 45 DFSPINKIGEGGFGSV------YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE 98
++ + +GEG FG V G+ KI KVL+ QG E EI + +
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H +++KLY + I+V Y N L ++ + S + R I
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIV------QRDKMSEQEARRFFQQIISA 119
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYL 217
+ + H R I+HRD+K N+LLD+ L KI+DFGL+ ++ N S G+ Y
Sbjct: 120 VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYA 173
Query: 218 APEYAIRGQVTR--KADIYSFGVLLVEIVSGR 247
APE I G++ + D++S GV+L ++ R
Sbjct: 174 APE-VISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ ++ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 172 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 224
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F+ I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 45 DFSPINKIGEGGFGSV------YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE 98
++ + +GEG FG V G+ KI KVL+ QG E EI + +
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H +++KLY + I+V Y N L ++ + S + R I
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIV------QRDKMSEQEARRFFQQIISA 124
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYL 217
+ + H R I+HRD+K N+LLD+ L KI+DFGL+ ++ N S G+ Y
Sbjct: 125 VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYA 178
Query: 218 APEYAIRGQVTR--KADIYSFGVLLVEIVSGR 247
APE I G++ + D++S GV+L ++ R
Sbjct: 179 APE-VISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +KE L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ +++DFGLAK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 45 DFSPINKIGEGGFGSV------YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE 98
++ + +GEG FG V G+ KI KVL+ QG E EI + +
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 99 HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
H +++KLY + I+V Y N L ++ + S + R I
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIV------QRDKMSEQEARRFFQQIISA 125
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYL 217
+ + H R I+HRD+K N+LLD+ L KI+DFGL+ ++ N S G+ Y
Sbjct: 126 VEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYA 179
Query: 218 APEYAIRGQVTR--KADIYSFGVLLVEIVSGR 247
APE I G++ + D++S GV+L ++ R
Sbjct: 180 APE-VISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 146 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 198
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 20/204 (9%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCVE 111
IG G FG V++ +L + AIK + + R + E+Q++ ++H N+V L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDLKAFFYS 103
Query: 112 -GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-----IARGLAFLHEE 165
G+ + V+ L + +T+ HY+ ++ +T + I + R LA++H
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLK---QTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 166 VRPHIIHRDIKASNILLDKDL-TPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIR 224
I HRDIK N+LLD K+ DFG AK++ A +VS + Y APE
Sbjct: 161 ---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--YRAPELIFG 215
Query: 225 G-QVTRKADIYSFGVLLVEIVSGR 247
T DI+S G ++ E++ G+
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 28/222 (12%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHE 100
+ DF + +GEG +G V K G+I AIK + + L EI+++ +HE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 101 NLVKLYGC----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ-FSWRTRSRICIGI 155
N++ ++ E + + + L L + + +IQ F ++T
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQT-------- 121
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI---------PANMTHV 206
R + LH ++IHRD+K SN+L++ + K+ DFGLA++I P
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 207 STRVAGTIGYLAPEYAI-RGQVTRKADIYSFGVLLVEIVSGR 247
T Y APE + + +R D++S G +L E+ R
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y GG +S+++ FS I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ K++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 144 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 196
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 39 LSIATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE-SRQGVKEFLTEIQV-IS 95
+ + DD PI ++G G +G V K R + G+I A+K + A + Q K L ++ + +
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 96 EIEHENLVKLYGCCV-EGNHRILVYNYLENNSLAQ---TLIGGGHHYSNIQFSWRTRSRI 151
++ V YG EG+ + + L + SL + +I G +I
Sbjct: 62 TVDCPFTVTFYGALFREGD--VWICMELMDTSLDKFYKQVIDKGQTIPE-----DILGKI 114
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRV- 210
+ I + L LH ++ +IHRD+K SN+L++ K+ DFG++ + + V+ +
Sbjct: 115 AVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDDVAKDID 169
Query: 211 AGTIGYLAPEYAIRGQVTR-----KADIYSFGVLLVEI 243
AG Y+APE I ++ + K+DI+S G+ ++E+
Sbjct: 170 AGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIEL 206
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 172 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 224
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAP + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ K++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 15/207 (7%)
Query: 44 DDFSPINKIGEGGFGSVYK-GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENL 102
D + ++G G FG V++ G A K + + EIQ +S + H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 103 VKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFL 162
V L+ + N +++Y ++ L + + H+ + + ++C +GL +
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEK-VADEHNKMSEDEAVEYMRQVC----KGLCHM 165
Query: 163 HEEVRPHIIHRDIKASNILLDKDLTP--KISDFGL-AKLIPANMTHVSTRVAGTIGYLAP 219
HE + +H D+K NI+ + K+ DFGL A L P V+T GT + AP
Sbjct: 166 HEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAP 219
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSG 246
E A V D++S GVL ++SG
Sbjct: 220 EVAEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ F I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 20/219 (9%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAES---RQGVKEFLTEIQ 92
++L + +D+ + IG G FG V R K K+ A+K+LS R F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+++ +V+L+ + + +V Y+ L + SN +
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-------SNYDVPEKWARFYT 179
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVA 211
+ L +H IHRD+K N+LLDK K++DFG K+ M T V
Sbjct: 180 AEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 235
Query: 212 GTIGYLAPEY----AIRGQVTRKADIYSFGVLLVEIVSG 246
GT Y++PE G R+ D +S GV L E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 20/219 (9%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAES---RQGVKEFLTEIQ 92
++L + +D+ + IG G FG V R K K+ A+K+LS R F E
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+++ +V+L+ + + +V Y+ L + SN +
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-------SNYDVPEKWARFYT 179
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVA 211
+ L +H IHRD+K N+LLDK K++DFG K+ M T V
Sbjct: 180 AEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 235
Query: 212 GTIGYLAPEY----AIRGQVTRKADIYSFGVLLVEIVSG 246
GT Y++PE G R+ D +S GV L E++ G
Sbjct: 236 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 44/232 (18%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVL--SAESRQGVKEFLTEIQVISEIE-HEN 101
+ + K+G+G +G V+K + G++ A+K + + ++ + EI +++E+ HEN
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 102 LVKLYGCCVEGNHR--ILVYNYLENNSLA---QTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+V L N R LV++Y+E + A ++ H + + +
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVH-----------KQYVVYQLI 119
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKL----------IPANMTH- 205
+ + +LH ++HRD+K SNILL+ + K++DFGL++ IP ++
Sbjct: 120 KVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 206 ---------VSTRVAGTIGYLAPEYAI-RGQVTRKADIYSFGVLLVEIVSGR 247
+ T T Y APE + + T+ D++S G +L EI+ G+
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 24/214 (11%)
Query: 43 TDDFSPINKIGEGGFGSVYK------GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISE 96
TD++ IG+G F V + G KI K LSA Q ++ E ++
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-I 155
++H N+V+L+ E LV++ + L + ++ +YS S CI I
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSEADAS------HCIQQI 112
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLD---KDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+ H+ ++HRD+K N+LL K K++DFGLA + + AG
Sbjct: 113 LEAVLHCHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ-QAWFGFAG 168
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T GYL+PE + + DI++ GV+L ++ G
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E ++ +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y GG +S+++ FS I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAP----------GGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ K++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 20/219 (9%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAES---RQGVKEFLTEIQ 92
++L + +D+ + IG G FG V R K K+ A+K+LS R F E
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
+++ +V+L+ + + +V Y+ L + SN +
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-------SNYDVPEKWARFYT 174
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVA 211
+ L +H IHRD+K N+LLDK K++DFG K+ M T V
Sbjct: 175 AEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV- 230
Query: 212 GTIGYLAPEY----AIRGQVTRKADIYSFGVLLVEIVSG 246
GT Y++PE G R+ D +S GV L E++ G
Sbjct: 231 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 43 TDDFSPINKIGEGGFGSVYK------GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISE 96
TD++ ++G+G F V + G+ KI K LSA Q ++ E ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-I 155
++H N+V+L+ E LV++ + L + ++ +YS S CI I
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSEADAS------HCIQQI 112
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+ H I+HRD+K N+LL K K++DFGLA + + AG
Sbjct: 113 LESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAG 168
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T GYL+PE + + D+++ GV+L ++ G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + K+ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y + GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEY----------VAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+L+D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
LAPE + + D ++ GVL+ E+ +G
Sbjct: 204 ALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHV---STRVA 211
+ARG+ FL IHRD+ A NILL ++ KI DFGLA+ I N +V TR+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 212 GTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE + K+D++S+GVLL EI S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 51 KIGEGGFGSVYK-GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
++G G FG V++ G A K + + EIQ +S + H LV L+
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ N +++Y ++ L + + + S + R ++C +GL +HE +
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR-QVC----KGLCHMHEN---N 275
Query: 170 IIHRDIKASNILLDKDLTP--KISDFGL-AKLIPANMTHVSTRVAGTIGYLAPEYAIRGQ 226
+H D+K NI+ + K+ DFGL A L P V+T GT + APE A
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 332
Query: 227 VTRKADIYSFGVLLVEIVSG 246
V D++S GVL ++SG
Sbjct: 333 VGYYTDMWSVGVLSYILLSG 352
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 43 TDDFSPINKIGEGGFGSVYK------GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISE 96
TD++ ++G+G F V + G+ KI K LSA Q ++ E ++
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARICRL 59
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-I 155
++H N+V+L+ E LV++ + L + ++ +YS S CI I
Sbjct: 60 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-EYYSEADAS------HCIQQI 112
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
+ H I+HRD+K N+LL K K++DFGLA + + AG
Sbjct: 113 LESVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAG 168
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T GYL+PE + + D+++ GV+L ++ G
Sbjct: 169 TPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y GG +S+++ FS I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ +++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENL 102
D + + ++G G FG V++ K G++ K ++ EI +++++ H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 103 VKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFL 162
+ L+ + +L+ +L L + + S + R + C GL +
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR-QAC----EGLKHM 165
Query: 163 HEEVRPHIIHRDIKASNILLD--KDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAP 219
HE I+H DIK NI+ + K + KI DFGLA KL P + V+T T + AP
Sbjct: 166 HEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAP 219
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSG 246
E R V D+++ GVL ++SG
Sbjct: 220 EIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
L KL + ++ +V Y GG +S+++ FS I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ K++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 25/211 (11%)
Query: 52 IGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE-HENLVKLYGCC 109
+GEG + V L++GK A+K++ ++ E++ + + + ++N+++L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ LV+ L+ S+ H F+ R SR+ +A L FLH +
Sbjct: 81 EDDTRFYLVFEKLQGGSIL------AHIQKQKHFNEREASRVVRDVAAALDFLHTK---G 131
Query: 170 IIHRDIKASNILLD--KDLTP-KISDFGLAKLIPAN------MTHVSTRVAGTIGYLAPE 220
I HRD+K NIL + + ++P KI DF L + N T T G+ Y+APE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 221 Y--AIRGQVT---RKADIYSFGVLLVEIVSG 246
Q T ++ D++S GV+L ++SG
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
L KL + ++ +V Y GG +S+++ FS I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ K++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAES---RQGVKEFLTEIQ 92
KE+ + +DF I IG G FG V ++K+ +I A+K+L+ R F E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
V+ + + + L+ + NH LV +Y L L +R
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP------EDMARFY 196
Query: 153 IG-IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IG + + +H+ H +HRDIK N+LLD + +++DFG + + T S+
Sbjct: 197 IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 212 GTIGYLAPE--YAIR---GQVTRKADIYSFGVLLVEIVSG 246
GT Y++PE A+ G+ + D +S GV + E++ G
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAES---RQGVKEFLTEIQ 92
KE+ + +DF I IG G FG V ++K+ +I A+K+L+ R F E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
V+ + + + L+ + NH LV +Y L L +R
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP------EDMARFY 180
Query: 153 IG-IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
IG + + +H+ H +HRDIK N+LLD + +++DFG + + T S+
Sbjct: 181 IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 212 GTIGYLAPE--YAIR---GQVTRKADIYSFGVLLVEIVSG 246
GT Y++PE A+ G+ + D +S GV + E++ G
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
LVKL + ++ +V Y GG +S+++ F I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ K++DFG AK + + + GT
Sbjct: 151 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPE 203
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 79 ESRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGN--HRILVYNYLENNSLAQTLIGGGH 136
+ R +++ EI ++ +++H N+VKL + N H +V+ + + +
Sbjct: 75 QPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 137 HYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA 196
+F ++ + +G+ +LH + IIHRDIK SN+L+ +D KI+DFG++
Sbjct: 135 SEDQARFYFQD-------LIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Query: 197 KLIPANMTHVSTRVAGTIGYLAPE--YAIRGQVTRKA-DIYSFGVLLVEIVSGRC 248
+ +S V GT ++APE R + KA D+++ GV L V G+C
Sbjct: 185 NEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAESRQGVKEFLT-EIQVISEIEHE 100
+D + + IG G FG R K ++ A+K + E + + E + EI + H
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+V+ + H +V Y L + + G +FS + G++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGVS 129
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTP--KISDFGLAKLIPANMTHVSTRVA-GTIGYL 217
+ H + HRD+K N LLD P KI+DFG +K A++ H + A GT Y+
Sbjct: 130 YAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYI 183
Query: 218 APEYAIRGQVTRK-ADIYSFGVLLVEIVSG 246
APE ++ + K AD++S GV L ++ G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 41/224 (18%)
Query: 52 IGEGGFGSV-YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE------HENLVK 104
+GEG FG V K + A+K +S RQ +K+ ++V EI H +++K
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFIS---RQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 105 LYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS----RICIGIARGLA 160
LY ++V Y GG + I R R I +
Sbjct: 74 LYDVITTPTDIVMVIEY-----------AGGELFDYIVEKKRMTEDEGRRFFQQIICAIE 122
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIP-ANMTHVSTRVAGTIGYLAP 219
+ H R I+HRD+K N+LLD +L KI+DFGL+ ++ N S G+ Y AP
Sbjct: 123 YCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAP 176
Query: 220 EYAIRGQVTR--KADIYSFGVLLVEIVSGRCNTNMRLPTEEQYL 261
E I G++ + D++S G++L ++ G RLP +++++
Sbjct: 177 E-VINGKLYAGPEVDVWSCGIVLYVMLVG------RLPFDDEFI 213
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 50 NKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISEIEHENLVKL 105
+ +G G FG V G + G A+K+L+ + S V + EIQ + H +++KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
Y +V Y+ L + G + R+ I + + H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCH-- 128
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R ++HRD+K N+LLD + KI+DFGL+ ++ ++ + T G+ Y APE I G
Sbjct: 129 -RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTS-CGSPNYAAPE-VISG 184
Query: 226 QVTR--KADIYSFGVLLVEIVSG 246
++ + DI+S GV+L ++ G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAES---RQGVKEFLTEIQ 92
K++ + +DF + IG G FG V +LK+ K+ A+K+L+ R F E
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
V+ + + + L+ + N+ LV +Y L L +F R +
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLS---------KFEDRLPEEMA 177
Query: 153 -IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVA 211
+A + + + H +HRDIK NIL+D + +++DFG + + T S+
Sbjct: 178 RFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV 237
Query: 212 GTIGYLAPEY-----AIRGQVTRKADIYSFGVLLVEIVSG 246
GT Y++PE +G+ + D +S GV + E++ G
Sbjct: 238 GTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 95/223 (42%), Gaps = 27/223 (12%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAESRQGVKEFLTEIQVISEIE 98
S F ++++G G +G V+K R K DG++ A+K S +G K+ + ++E+
Sbjct: 53 SFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKD---RARKLAEVG 108
Query: 99 HENLVKLYGCCV------EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
V + CCV E + + L SL Q G Q R +
Sbjct: 109 SHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL 168
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG 212
LA LH + ++H D+K +NI L K+ DFGL L+ G
Sbjct: 169 -----ALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEG 218
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLP 255
Y+APE ++G AD++S G+ ++E+ NM LP
Sbjct: 219 DPRYMAPEL-LQGSYGTAADVFSLGLTILEVA-----CNMELP 255
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 50 NKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVISEIEHENLVKL 105
+ +G G FG V G + G A+K+L+ + S V + EIQ + H +++KL
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
Y +V Y+ L + G + R+ I + + H
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCH-- 128
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R ++HRD+K N+LLD + KI+DFGL+ ++ G+ Y APE I G
Sbjct: 129 -RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAPE-VISG 184
Query: 226 QVTR--KADIYSFGVLLVEIVSG 246
++ + DI+S GV+L ++ G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIK----VLSAESRQGVK------- 85
KE +D+ I + +G F + KD K A+K L + R K
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKIS 82
Query: 86 ------EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYS 139
+F E+Q+I++I++E + G + ++Y Y+EN+S+ + ++
Sbjct: 83 IKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSI----LKFDEYFF 138
Query: 140 NIQFSWRTRSRI----CI--GIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDF 193
+ ++ I CI + +++H E +I HRD+K SNIL+DK+ K+SDF
Sbjct: 139 VLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 194 GLAKLIPANMTHVSTRVAGTIG---YLAPEYAIRGQVTR--KADIYSFGVLL 240
G ++ + V ++ G+ G ++ PE+ K DI+S G+ L
Sbjct: 197 GESEYM------VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 25/211 (11%)
Query: 44 DDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAESRQGVKEF---LTEIQVISEIEH 99
D F I +G G FG V + ++ G A+K+L + +K+ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQ----FSWRTRSRICIGI 155
L KL + ++ +V Y GG +S+++ F I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAP----------GGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH +I+RD+K N+++D+ K++DFG AK + + + GT
Sbjct: 152 VLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----TWXLCGTPE 204
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YLAPE + + D ++ GVL+ E+ +G
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF ++ D GKI +L ++ ++ EI + + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR--EKMSMEISIHRSLAHQHVVGF 82
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + H + I G +LH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLEL------HKRRKALTEPEARYYLRQIVLGCQYLH-- 134
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R +IHRD+K N+ L++DL KI DFGLA + + T + GT Y+APE +
Sbjct: 135 -RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKK 192
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + D++S G ++ ++ G+
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKDGK-IAAIKVLSAESRQGVKEFLT-EIQVISEIEHE 100
+D + + IG G FG R K K + A+K + E + E + EI + H
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDENVQREIINHRSLRHP 76
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+V+ + H ++ Y L + + G +FS + G++
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAG------RFSEDEARFFFQQLLSGVS 130
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTP--KISDFGLAKLIPANMTHVSTR-VAGTIGYL 217
+ H I HRD+K N LLD P KI DFG +K +++ H + GT Y+
Sbjct: 131 YCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYI 184
Query: 218 APEYAIRGQVTRK-ADIYSFGVLLVEIVSG 246
APE +R + K AD++S GV L ++ G
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 27/215 (12%)
Query: 45 DFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLSAE---SRQGVKEFLTEIQVIS-EIEH 99
DF+ + +G+G FG V K ++ A+K+L + V+ + E +V++ +
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI----GI 155
L +L+ C + V Y + GG +IQ R + + I
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEY----------VNGGDLMYHIQQVGRFKEPHAVFYAAEI 130
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH-VSTR-VAGT 213
A GL FL + II+RD+K N++LD + KI+DFG+ K N+ V+T+ GT
Sbjct: 131 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGT 184
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGRC 248
Y+APE + D ++FGVLL E+++G+
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF ++ D GKI +L ++ ++ EI + + H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR--EKMSMEISIHRSLAHQHVVGF 82
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + H + I G +LH
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLEL------HKRRKALTEPEARYYLRQIVLGCQYLH-- 134
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R +IHRD+K N+ L++DL KI DFGLA + + T + GT Y+APE +
Sbjct: 135 -RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKK 192
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + D++S G ++ ++ G+
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF Y+ D GK+ +L ++ ++ TEI + +++ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVVGF 107
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + L + + + R I +G+ +LH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN 161
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
+IHRD+K N+ L+ D+ KI DFGLA I + T + GT Y+APE +
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKK 217
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + DI+S G +L ++ G+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGK 239
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 46 FSPINKIGEGGFGSVYK------GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEH 99
+ ++G+G F V + G+ KI K LSA Q ++ E ++ ++H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER---EARICRLLKH 80
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-IARG 158
N+V+L+ E H L+++ + L + ++ +YS S CI I
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-EYYSEADAS------HCIQQILEA 133
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDL---TPKISDFGLAKLIPANMTHVSTRVAGTIG 215
+ H+ ++HRD+K N+LL L K++DFGLA + AGT G
Sbjct: 134 VLHCHQM---GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPG 189
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
YL+PE + + D+++ GV+L ++ G
Sbjct: 190 YLSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 26/223 (11%)
Query: 35 SYKELSIATDDFSPINKIGEGGFGSVYKGR-LKDGKIAAIKVLSAE-SRQGVKEFLTEIQ 92
+ + + DD PI ++G G +G V K R + G+I A+K + A + Q K L ++
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLD 84
Query: 93 V-ISEIEHENLVKLYGCCV-EGNHRILVYNYLENNSLAQ---TLIGGGHHYSNIQFSWRT 147
+ ++ V YG EG+ + + L + SL + +I G
Sbjct: 85 ISXRTVDCPFTVTFYGALFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPE-----DI 137
Query: 148 RSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVS 207
+I + I + L LH ++ +IHRD+K SN+L++ K DFG++ + + V+
Sbjct: 138 LGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL---VDDVA 192
Query: 208 TRV-AGTIGYLAPEYAIRGQVTR-----KADIYSFGVLLVEIV 244
+ AG Y APE I ++ + K+DI+S G+ +E+
Sbjct: 193 KDIDAGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELA 234
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF ++ D GKI +L ++ ++ EI + + H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR--EKMSMEISIHRSLAHQHVVGF 86
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + H + I G +LH
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLEL------HKRRKALTEPEARYYLRQIVLGCQYLH-- 138
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R +IHRD+K N+ L++DL KI DFGLA + + T + GT Y+APE +
Sbjct: 139 -RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKK 196
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + D++S G ++ ++ G+
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 90/210 (42%), Gaps = 20/210 (9%)
Query: 45 DFSPIN---KIGEGGFGSVYKGRLKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEH 99
DF +N K+ E G ++KGR + I +KVL S + ++F E + H
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIV-VKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 100 ENLVKLYGCC--VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
N++ + G C H L+ ++ SL L H +N + + AR
Sbjct: 67 PNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVL----HEGTNFVVDQSQAVKFALDXAR 122
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKIS--DFGLAKLIPANMTHVSTRVAGTIG 215
G AFLH + P I + + ++ +D+D T +IS D + P + VA
Sbjct: 123 GXAFLHT-LEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRX-YAPAWVAPEAL 180
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
PE R R AD +SF VLL E+V+
Sbjct: 181 QKKPEDTNR----RSADXWSFAVLLWELVT 206
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 28/208 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSAE--SRQGVKEFLTEIQVISEIEHENLVKLYGCC 109
IG+G FG VY GR G++ AI+++ E + +K F E+ + HEN+V G C
Sbjct: 41 IGKGRFGQVYHGRW-HGEV-AIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 110 VEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPH 169
+ H ++ + + +L + + I +I I +G+ +LH +
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVV-----RDAKIVLDVNKTRQIAQEIVKGMGYLHAK---G 150
Query: 170 IIHRDIKASNILLDKDLTPKISDFGL---AKLIPANMTHVSTRVA-GTIGYLAPEYAIRG 225
I+H+D+K+ N+ D I+DFGL + ++ A R+ G + +LAPE IR
Sbjct: 151 ILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPE-IIRQ 208
Query: 226 ----------QVTRKADIYSFGVLLVEI 243
++ +D+++ G + E+
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 45 DFSPINKIGEGGFGSVY-KGRLKDGKIAAIKVLSAE---SRQGVKEFLTEIQVIS-EIEH 99
DF+ + +G+G FG V R ++ A+K+L + V+ + E +V++ +
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 100 ENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI----GI 155
L +L+ C + V Y + GG +IQ R + + I
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEY----------VNGGDLMYHIQQVGRFKEPHAVFYAAEI 451
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH-VSTR-VAGT 213
A GL FL + II+RD+K N++LD + KI+DFG+ K N+ V+T+ GT
Sbjct: 452 AIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGT 505
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
Y+APE + D ++FGVLL E+++G+
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 43 TDDFSPINKIGEGGFGSVYK------GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISE 96
T+++ ++G+G F V + G+ I K LSA Q ++ E ++
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRL 66
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG-I 155
++H N+V+L+ E H L+++ + L + ++ +YS S CI I
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-EYYSEADAS------HCIQQI 119
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDL---TPKISDFGLAKLIPANMTHVSTRVAG 212
+ H+ ++HR++K N+LL L K++DFGLA + AG
Sbjct: 120 LEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAG 175
Query: 213 TIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T GYL+PE + + D+++ GV+L ++ G
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 44 DDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS--------AESRQGVKEFLTEIQVI 94
D++ +G G G V K K AIK++S A TEI+++
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYL--ENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
++ H ++K + N+ E+ + L+ GG + + + R + C
Sbjct: 69 KKLNHPCIIK-------------IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 115
Query: 153 ----IGIARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTH 205
+ + +LHE IIHRD+K N+LL ++D KI+DFG +K++ T
Sbjct: 116 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 170
Query: 206 VSTRVAGTIGYLAPEYAIR---GQVTRKADIYSFGVLLVEIVSG 246
+ + GT YLAPE + R D +S GV+L +SG
Sbjct: 171 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 44 DDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS--------AESRQGVKEFLTEIQVI 94
D++ +G G G V K K AIK++S A TEI+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYL--ENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
++ H ++K + N+ E+ + L+ GG + + + R + C
Sbjct: 70 KKLNHPCIIK-------------IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 153 ----IGIARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTH 205
+ + +LHE IIHRD+K N+LL ++D KI+DFG +K++ T
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 171
Query: 206 VSTRVAGTIGYLAPEYAIR---GQVTRKADIYSFGVLLVEIVSG 246
+ + GT YLAPE + R D +S GV+L +SG
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 44 DDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS--------AESRQGVKEFLTEIQVI 94
D++ +G G G V K K AIK++S A TEI+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYL--ENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
++ H ++K + N+ E+ + L+ GG + + + R + C
Sbjct: 70 KKLNHPCIIK-------------IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 153 ----IGIARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTH 205
+ + +LHE IIHRD+K N+LL ++D KI+DFG +K++ T
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 171
Query: 206 VSTRVAGTIGYLAPEYAIR---GQVTRKADIYSFGVLLVEIVSG 246
+ + GT YLAPE + R D +S GV+L +SG
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 44 DDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS--------AESRQGVKEFLTEIQVI 94
D++ +G G G V K K AIK++S A TEI+++
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYL--ENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
++ H ++K + N+ E+ + L+ GG + + + R + C
Sbjct: 70 KKLNHPCIIK-------------IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 153 ----IGIARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTH 205
+ + +LHE IIHRD+K N+LL ++D KI+DFG +K++ T
Sbjct: 117 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 171
Query: 206 VSTRVAGTIGYLAPEYAIR---GQVTRKADIYSFGVLLVEIVSG 246
+ + GT YLAPE + R D +S GV+L +SG
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 60 VYKGRLKDGKIAAIKV-----LSAESRQGVKEF-LTEIQVISEIE-HENLVKLYGCCVEG 112
++K K+ + I V SAE Q ++E L E+ ++ ++ H N+++L
Sbjct: 24 IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 83
Query: 113 NHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIH 172
LV++ ++ L L + S + +I + + LH + +I+H
Sbjct: 84 TFFFLVFDLMKKGELFDYLT------EKVTLSEKETRKIMRALLEVICALH---KLNIVH 134
Query: 173 RDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAPEYAIRGQVT--- 228
RD+K NILLD D+ K++DFG + +L P V GT YLAPE I +
Sbjct: 135 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPE-IIECSMNDNH 190
Query: 229 ----RKADIYSFGVLLVEIVSG 246
++ D++S GV++ +++G
Sbjct: 191 PGYGKEVDMWSTGVIMYTLLAG 212
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L+Q + ++ S + +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI--------QMELDHERMSYLLYQMLV 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 60 VYKGRLKDGKIAAIKV-----LSAESRQGVKEF-LTEIQVISEIE-HENLVKLYGCCVEG 112
++K K+ + I V SAE Q ++E L E+ ++ ++ H N+++L
Sbjct: 37 IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 96
Query: 113 NHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIH 172
LV++ ++ L L + S + +I + + LH + +I+H
Sbjct: 97 TFFFLVFDLMKKGELFDYLT------EKVTLSEKETRKIMRALLEVICALH---KLNIVH 147
Query: 173 RDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAPEYAIRGQVT--- 228
RD+K NILLD D+ K++DFG + +L P V GT YLAPE I +
Sbjct: 148 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPE-IIECSMNDNH 203
Query: 229 ----RKADIYSFGVLLVEIVSG 246
++ D++S GV++ +++G
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF Y+ D GK+ +L ++ ++ TEI + +++ ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVVGF 91
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + L + + + R I +G+ +LH
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN 145
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
+IHRD+K N+ L+ D+ KI DFGLA I + + GT Y+APE +
Sbjct: 146 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKK 201
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + DI+S G +L ++ G+
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGK 223
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L+Q + ++ S + +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI--------QMELDHERMSYLLYQMLV 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 44 DDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS--------AESRQGVKEFLTEIQVI 94
D++ +G G G V K K AIK++S A TEI+++
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYL--ENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
++ H ++K + N+ E+ + L+ GG + + + R + C
Sbjct: 76 KKLNHPCIIK-------------IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 122
Query: 153 ----IGIARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTH 205
+ + +LHE IIHRD+K N+LL ++D KI+DFG +K++ T
Sbjct: 123 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 177
Query: 206 VSTRVAGTIGYLAPEYAIR---GQVTRKADIYSFGVLLVEIVSG 246
+ + GT YLAPE + R D +S GV+L +SG
Sbjct: 178 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 28/202 (13%)
Query: 60 VYKGRLKDGKIAAIKV-----LSAESRQGVKEF-LTEIQVISEIE-HENLVKLYGCCVEG 112
++K K+ + I V SAE Q ++E L E+ ++ ++ H N+++L
Sbjct: 37 IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 96
Query: 113 NHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIH 172
LV++ ++ L L + S + +I + + LH + +I+H
Sbjct: 97 TFFFLVFDLMKKGELFDYLT------EKVTLSEKETRKIMRALLEVICALH---KLNIVH 147
Query: 173 RDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTIGYLAPEYAIRGQVT--- 228
RD+K NILLD D+ K++DFG + +L P V GT YLAPE I +
Sbjct: 148 RDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SVCGTPSYLAPE-IIECSMNDNH 203
Query: 229 ----RKADIYSFGVLLVEIVSG 246
++ D++S GV++ +++G
Sbjct: 204 PGYGKEVDMWSTGVIMYTLLAG 225
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF ++ D GKI +L ++ ++ EI + + H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR--EKMSMEISIHRSLAHQHVVGF 104
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + H + I G +LH
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLEL------HKRRKALTEPEARYYLRQIVLGCQYLH-- 156
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R +IHRD+K N+ L++DL KI DFGLA + + + GT Y+APE +
Sbjct: 157 -RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKK 214
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + D++S G ++ ++ G+
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAESRQGVKEFLT-EIQVISEIEHE 100
+D + + IG G FG R K ++ A+K + E + + E + EI + H
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 74
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+V+ + H +V Y L + + G +FS + G++
Sbjct: 75 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGVS 128
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTP--KISDFGLAKLIPANMTHVSTR-VAGTIGYL 217
+ H + HRD+K N LLD P KI DFG +K +++ H + GT Y+
Sbjct: 129 YCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYI 182
Query: 218 APEYAIRGQVTRK-ADIYSFGVLLVEIVSG 246
APE ++ + K AD++S GV L ++ G
Sbjct: 183 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 49 INKIGEGGFGSV--YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLY 106
I K+GEGGF V +G L DG A+K + +Q +E E + H N+++L
Sbjct: 34 IQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 107 GCCVE----GNHRILVYNYLENNSLA---QTLIGGGHHYSNIQFSWRTRSRICIGIARGL 159
C+ + L+ + + +L + L G+ + Q W + +GI RGL
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGL 147
Query: 160 AFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG------- 212
+H + HRD+K +NILL + P + D G +M V G
Sbjct: 148 EAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLG-------SMNQACIHVEGSRQALTL 197
Query: 213 --------TIGYLAPE-YAIRGQ--VTRKADIYSFGVLLVEIVSGRCNTNM 252
TI Y APE ++++ + + D++S G +L ++ G +M
Sbjct: 198 QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDM 248
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF Y+ D GK+ +L ++ ++ TEI + +++ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVVGF 107
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + L + + + R I +G+ +LH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN 161
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
+IHRD+K N+ L+ D+ KI DFGLA I + + GT Y+APE +
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYIAPEVLCKK 217
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + DI+S G +L ++ G+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGK 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF ++ D GKI +L ++ ++ EI + + H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR--EKMSMEISIHRSLAHQHVVGF 106
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + H + I G +LH
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLEL------HKRRKALTEPEARYYLRQIVLGCQYLH-- 158
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R +IHRD+K N+ L++DL KI DFGLA + + + GT Y+APE +
Sbjct: 159 -RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKK 216
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + D++S G ++ ++ G+
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGK 238
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 32/213 (15%)
Query: 52 IGEGGFGSVYKGRLKD----GKI----AAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+G+G F ++KG ++ G++ +KVL R + F ++S++ H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
YG CV G+ ILV +++ SL L + + I W+ + +A + FL
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYL---KKNKNCINILWKL--EVAKQLAAAMHFLE 130
Query: 164 EEVRPHIIHRDIKASNILL-----DKDLTP---KISDFGLA-KLIPANMTHVSTRVAGTI 214
E +IH ++ A NILL K P K+SD G++ ++P ++ + I
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI------LQERI 181
Query: 215 GYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSG 246
++ PE + + D +SFG L EI SG
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF Y+ D GK+ +L ++ ++ TEI + +++ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVVGF 107
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + L + + + R I +G+ +LH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN 161
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
+IHRD+K N+ L+ D+ KI DFGLA I + + GT Y+APE +
Sbjct: 162 ---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYIAPEVLCKK 217
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + DI+S G +L ++ G+
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGK 239
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 52 IGEGGFGSVYKGRLKD------GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
+G+GGF ++ D GKI +L ++ ++ EI + + H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQR--EKMSMEISIHRSLAHQHVVGF 80
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+G + + +V SL + H + I G +LH
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLEL------HKRRKALTEPEARYYLRQIVLGCQYLH-- 132
Query: 166 VRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRG 225
R +IHRD+K N+ L++DL KI DFGLA + + + GT Y+APE +
Sbjct: 133 -RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKK 190
Query: 226 QVTRKADIYSFGVLLVEIVSGR 247
+ + D++S G ++ ++ G+
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 18/225 (8%)
Query: 27 GIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVK 85
G+H++ ++ TD + IG G + + K + A+K++ R +
Sbjct: 5 GVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE 64
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSW 145
E EI ++ +H N++ L +G + +V ++ L ++ FS
Sbjct: 65 EI--EI-LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF------FSE 115
Query: 146 RTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL-LDKDLTP---KISDFGLAKLIPA 201
R S + I + + +LH + ++HRD+K SNIL +D+ P +I DFG AK + A
Sbjct: 116 REASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 202 NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ T T ++APE R DI+S GVLL +++G
Sbjct: 173 ENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 36 YKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQVI 94
Y + + +D + IG G + + K + A+KV+ R +E EI ++
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EI-LL 75
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIG 154
+H N++ L +G H LV + L ++ FS R S +
Sbjct: 76 RYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHT 129
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNIL-LDKDLTP---KISDFGLAKLIPANMTHVSTRV 210
I + + +LH + ++HRD+K SNIL +D+ P +I DFG AK + A + T
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 211 AGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
T ++APE R DI+S G+LL +++G
Sbjct: 187 Y-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 44 DDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS--------AESRQGVKEFLTEIQVI 94
D++ +G G G V K K AI+++S A TEI+++
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYL--ENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
++ H ++K + N+ E+ + L+ GG + + + R + C
Sbjct: 195 KKLNHPCIIK-------------IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 241
Query: 153 ----IGIARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTH 205
+ + +LHE IIHRD+K N+LL ++D KI+DFG +K++ T
Sbjct: 242 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 296
Query: 206 VSTRVAGTIGYLAPEYAIR---GQVTRKADIYSFGVLLVEIVSG 246
+ + GT YLAPE + R D +S GV+L +SG
Sbjct: 297 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 30/222 (13%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLS----AESRQGV--KEFLTEIQ 92
S+ D + ++G G F V K R K GK A K + + SR+GV +E E+
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTR 148
++ EI H N++ L+ +L+ L+ GG + + +
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILE----------LVSGGELFDFLAEKESLTEDEA 110
Query: 149 SRICIGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TPKIS--DFGLAKLIPANMT 204
++ I G+ +LH + I H D+K NI LLDK++ P+I DFG+A I A
Sbjct: 111 TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 167
Query: 205 HVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 168 F--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 44 DDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLS--------AESRQGVKEFLTEIQVI 94
D++ +G G G V K K AI+++S A TEI+++
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYL--ENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
++ H ++K + N+ E+ + L+ GG + + + R + C
Sbjct: 209 KKLNHPCIIK-------------IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 255
Query: 153 ----IGIARGLAFLHEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTH 205
+ + +LHE IIHRD+K N+LL ++D KI+DFG +K++ T
Sbjct: 256 KLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETS 310
Query: 206 VSTRVAGTIGYLAPEYAIR---GQVTRKADIYSFGVLLVEIVSG 246
+ + GT YLAPE + R D +S GV+L +SG
Sbjct: 311 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 72 AIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTL 131
A+KV+ R +E EI ++ +H N++ L +G H LV + L +
Sbjct: 56 AVKVIDKSKRDPSEEI--EI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 132 IGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL-LDKDLTP-- 188
+ FS R S + I + + +LH + ++HRD+K SNIL +D+ P
Sbjct: 113 L------RQKFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPEC 163
Query: 189 -KISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+I DFG AK + A + T T ++APE R DI+S G+LL +++G
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-T 213
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-T 213
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
N IG G +G V K +I A K + + V F EI+++ ++H N+++LY
Sbjct: 15 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE- 73
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGLAFLHE 164
E N I L L GG + + F +RI + +A+ H
Sbjct: 74 TFEDNTDIY---------LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH- 123
Query: 165 EVRPHIIHRDIKASNILL--DKDLTP-KISDFGL-AKLIPANMTHVSTRVAGTIGYLAPE 220
+ ++ HRD+K N L D +P K+ DFGL A+ P M + T+V GT Y++P+
Sbjct: 124 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYVSPQ 178
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ G + D +S GV++ ++ G PT+ + +L+
Sbjct: 179 -VLEGLYGPECDEWSAGVMMYVLLCG--YPPFSAPTDXEVMLK 218
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-T 213
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 155 IARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAG-T 213
+A+G+ FL IHRD+ A NILL + KI DFGLA+ I + +V A
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 214 IGYLAPEYAIRGQVTRKADIYSFGVLLVEIVS 245
+ ++APE T ++D++SFGVLL EI S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 18/209 (8%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAESRQGVKEFLTEIQVISEIEHEN 101
+D + + IG G FG R K ++ A+K + + EI + H N
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPN 76
Query: 102 LVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAF 161
+V+ + H +V Y L + + G +FS + G+++
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGVSY 130
Query: 162 LHEEVRPHIIHRDIKASNILLDKDLTP--KISDFGLAKLIPANMTHVSTR-VAGTIGYLA 218
H + HRD+K N LLD P KI DFG +K +++ H + GT Y+A
Sbjct: 131 CHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIA 184
Query: 219 PEYAIRGQVTRK-ADIYSFGVLLVEIVSG 246
PE ++ + K AD++S GV L ++ G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 50 NKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYGC 108
N IG G +G V K +I A K + + V F EI+++ ++H N+++LY
Sbjct: 32 NTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE- 90
Query: 109 CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGLAFLHE 164
E N I L L GG + + F +RI + +A+ H
Sbjct: 91 TFEDNTDIY---------LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH- 140
Query: 165 EVRPHIIHRDIKASNILL--DKDLTP-KISDFGL-AKLIPANMTHVSTRVAGTIGYLAPE 220
+ ++ HRD+K N L D +P K+ DFGL A+ P M + T+V GT Y++P+
Sbjct: 141 --KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYVSPQ 195
Query: 221 YAIRGQVTRKADIYSFGVLLVEIVSGRCNTNMRLPTEEQYLLE 263
+ G + D +S GV++ ++ G PT+ + +L+
Sbjct: 196 -VLEGLYGPECDEWSAGVMMYVLLCG--YPPFSAPTDXEVMLK 235
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 28/214 (13%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVL--SAESRQGVKEFLTEIQVISEIEHENL 102
D P+ G S GR G AIK L +S K E++++ + HEN+
Sbjct: 29 DLQPVGSGAYGAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 103 VKLYGCCV------EGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+ L + LV ++ L + + IQF + +
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQF-------LVYQML 138
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMT-HVSTRVAGTIG 215
+GL ++H IIHRD+K N+ +++D KI DFGLA+ + M V TR
Sbjct: 139 KGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 216 YLAPEYAIRG-QVTRKADIYSFGVLLVEIVSGRC 248
Y APE + + T+ DI+S G ++ E+++G+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 26/212 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAES-RQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+G+G +V++GR K G + AIKV + S + V + E +V+ ++ H+N+VKL+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 110 VEGN--HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVR 167
E H++L+ + SL L + Y + + R +G G+ L E
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLREN-- 131
Query: 168 PHIIHRDIKASNILL----DKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
I+HR+IK NI+ D K++DFG A+ + + VS + GT YL P+
Sbjct: 132 -GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYE 188
Query: 224 RGQVTRK---------ADIYSFGVLLVEIVSG 246
R V RK D++S GV +G
Sbjct: 189 RA-VLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 40 SIATDDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLS----AESRQGV--KEFLTEIQ 92
S+ D + ++G G F V K R K GK A K + SR+GV +E E+
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTR 148
++ EI H N++ L+ +L+ L+ GG + + +
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILE----------LVSGGELFDFLAEKESLTEDEA 131
Query: 149 SRICIGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TPKIS--DFGLAKLIPANMT 204
++ I G+ +LH + I H D+K NI LLDK++ P+I DFG+A I A
Sbjct: 132 TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
Query: 205 HVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 189 F--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L+Q + ++ S + +
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI--------QMELDHERMSYLLYQMLV 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L+Q + H + S+ +C
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 52 IGEGGFGSVYKGRLKD----GKI----AAIKVLSAESRQGVKEFLTEIQVISEIEHENLV 103
+G+G F ++KG ++ G++ +KVL R + F ++S++ H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLH 163
YG C G+ ILV +++ SL L + + I W+ + +A + FL
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYL---KKNKNCINILWKL--EVAKQLAWAMHFLE 130
Query: 164 EEVRPHIIHRDIKASNILL-----DKDLTP---KISDFGLA-KLIPANMTHVSTRVAGTI 214
E +IH ++ A NILL K P K+SD G++ ++P ++ + I
Sbjct: 131 ENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI------LQERI 181
Query: 215 GYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSG 246
++ PE + + D +SFG L EI SG
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L+Q + H + S+ +C
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 102/247 (41%), Gaps = 37/247 (14%)
Query: 46 FSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE------ 98
+ P + IG G V + G A+K++ + + E L E++ + E
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 99 ---HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGI 155
H +++ L + LV++ + L L + S + I +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT------EKVALSEKETRSIMRSL 209
Query: 156 ARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLA-KLIPANMTHVSTRVAGTI 214
++FLH +I+HRD+K NILLD ++ ++SDFG + L P + GT
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTP 263
Query: 215 GYLAPEY------AIRGQVTRKADIYSFGVLLVEIVSG-------RCNTNMRLPTEEQYL 261
GYLAPE ++ D+++ GV+L +++G R +R+ E QY
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ 323
Query: 262 LERT-WD 267
WD
Sbjct: 324 FSSPEWD 330
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L+Q + H + S+ +C
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 29 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 87 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 138
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 96/229 (41%), Gaps = 33/229 (14%)
Query: 37 KELSIATDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAES---RQGVKEFLTEIQ 92
KE+ + DDF + IG G F V ++K G++ A+K+++ R V F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 93 VISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRIC 152
V+ + + +L+ + N+ LV Y L L G RI
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE-------------RIP 160
Query: 153 IGIARGLAFLHEEV-------RPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTH 205
+AR +L E V R +HRDIK NILLD+ +++DFG + A+ T
Sbjct: 161 AEMAR--FYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV 218
Query: 206 VSTRVAGTIGYLAPE-------YAIRGQVTRKADIYSFGVLLVEIVSGR 247
S GT YL+PE G + D ++ GV E+ G+
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 30/218 (13%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLK-DGKIAAIKVLS----AESRQGV--KEFLTEIQVISE 96
D + ++G G F V K R K GK A K + + SR+GV +E E+ ++ E
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 97 IEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRIC 152
I H N++ L+ +L+ L+ GG + + + ++
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILE----------LVSGGELFDFLAEKESLTEDEATQFL 121
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TPKIS--DFGLAKLIPANMTHVST 208
I G+ +LH + I H D+K NI LLDK++ P+I DFG+A I A
Sbjct: 122 KQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--K 176
Query: 209 RVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + ++ S + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--------QMELDHERMSYLLYQMLX 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAESRQGVKEFLT-EIQVISEIEHE 100
+D + + IG G FG R K ++ A+K + E + + E + EI + H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+V+ + H +V Y L + + G +FS + G++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGVS 129
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTP--KISDFGLAKLIPANMTHVSTR-VAGTIGYL 217
+ H + HRD+K N LLD P KI FG +K +++ H + GT Y+
Sbjct: 130 YCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYI 183
Query: 218 APEYAIRGQVTRK-ADIYSFGVLLVEIVSG 246
APE ++ + K AD++S GV L ++ G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 20/210 (9%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSAESRQGVKEFLT-EIQVISEIEHE 100
+D + + IG G FG R K ++ A+K + E + + E + EI + H
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI--ERGEKIDENVKREIINHRSLRHP 75
Query: 101 NLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLA 160
N+V+ + H +V Y L + + G +FS + G++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAG------RFSEDEARFFFQQLISGVS 129
Query: 161 FLHEEVRPHIIHRDIKASNILLDKDLTP--KISDFGLAKLIPANMTHVSTR-VAGTIGYL 217
+ H + HRD+K N LLD P KI FG +K +++ H + GT Y+
Sbjct: 130 YCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYI 183
Query: 218 APEYAIRGQVTRK-ADIYSFGVLLVEIVSG 246
APE ++ + K AD++S GV L ++ G
Sbjct: 184 APEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 52 IGEGGFGSVYKGRLKD-GKIAAIKVLSAES-RQGVKEFLTEIQVISEIEHENLVKLYGCC 109
+G+G +V++GR K G + AIKV + S + V + E +V+ ++ H+N+VKL+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 110 VEGN--HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEEVR 167
E H++L+ + SL L + Y + + R +G G+ L E
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG---GMNHLREN-- 131
Query: 168 PHIIHRDIKASNILL----DKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAI 223
I+HR+IK NI+ D K++DFG A+ + + V + GT YL P+
Sbjct: 132 -GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMYE 188
Query: 224 RGQVTRK---------ADIYSFGVLLVEIVSG 246
R V RK D++S GV +G
Sbjct: 189 RA-VLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 95/214 (44%), Gaps = 29/214 (13%)
Query: 46 FSPINKIGEGGFGS-VYKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI-EHENLV 103
F P + +G G G+ VY+G + +A ++L +E +Q++ E EH N++
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADRE----VQLLRESDEHPNVI 81
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICI--GIARGLAF 161
+ + C E + + + Y+ A TL + F+ I + GLA
Sbjct: 82 RYF--CTEKDRQ---FQYIAIELCAATL---QEYVEQKDFAHLGLEPITLLQQTTSGLAH 133
Query: 162 LHEEVRPHIIHRDIKASNILLDK-----DLTPKISDFGLAKLIPANMTHVSTR--VAGTI 214
LH +I+HRD+K NIL+ + ISDFGL K + S R V GT
Sbjct: 134 LHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 215 GYLAPEYA---IRGQVTRKADIYSFGVLLVEIVS 245
G++APE + T DI+S G + ++S
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 27 GIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIA-AIKVLSAESRQGVK 85
G+H++ ++ TD + IG G + + K A+K++ R +
Sbjct: 5 GVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE 64
Query: 86 EFLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSW 145
E EI ++ +H N++ L +G + +V + L ++ FS
Sbjct: 65 EI--EI-LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL------RQKFFSE 115
Query: 146 RTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNIL-LDKDLTP---KISDFGLAKLIPA 201
R S + I + + +LH + ++HRD+K SNIL +D+ P +I DFG AK + A
Sbjct: 116 REASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 202 NMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ T T ++APE R DI+S GVLL ++G
Sbjct: 173 ENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPA 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + ++ S + +
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--------QMELDHERMSYLLYQMLX 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + ++ S + +
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--------QMELDHERMSYLLYQMLX 130
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYR 185
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 57/255 (22%)
Query: 25 FSGIHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSA--ESR 81
F GI NV + D++ + IG G +G VY K+ K AIK ++ E
Sbjct: 16 FQGIKNVHV---------PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDL 66
Query: 82 QGVKEFLTEIQVISEIEHENLVKLYGCCVEGN----HRILVYNYLENNSLAQTLIGGGHH 137
K L EI +++ ++ + +++LY + + + + + ++ L +
Sbjct: 67 IDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF------ 120
Query: 138 YSNIQFSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK 197
+ I + I + G F+HE IIHRD+K +N LL++D + K+ DFGLA+
Sbjct: 121 KTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
Query: 198 LI-------------------PAN-------MTHVSTRVAGTIGYLAPEYA-IRGQVTRK 230
I P N +HV TR Y APE ++ T+
Sbjct: 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKS 232
Query: 231 ADIYSFGVLLVEIVS 245
DI+S G + E+++
Sbjct: 233 IDIWSTGCIFAELLN 247
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSAESRQG-----------VKEFLTEIQVISEIEHE 100
I G +G+V G +G AIK + G K L EI++++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 101 NLVKLYGCCVE----GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N++ L V H++ + L LAQ + H I S + I
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI-----HDQRIVISPQHIQYFMYHIL 144
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK--LIPANMTHVSTRVAGTI 214
GL LHE ++HRD+ NILL + I DF LA+ AN TH T
Sbjct: 145 LGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---- 197
Query: 215 GYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSGRC 248
Y APE ++ + T+ D++S G ++ E+ + +
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 89/215 (41%), Gaps = 30/215 (13%)
Query: 52 IGEGGFGSVYKGRLKDGKIAAIKVLSAESRQG-----------VKEFLTEIQVISEIEHE 100
I G +G+V G +G AIK + G K L EI++++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 101 NLVKLYGCCVE----GNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
N++ L V H++ + L LAQ + H I S + I
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI-----HDQRIVISPQHIQYFMYHIL 144
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAK--LIPANMTHVSTRVAGTI 214
GL LHE ++HRD+ NILL + I DF LA+ AN TH T
Sbjct: 145 LGLHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR---- 197
Query: 215 GYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSGRC 248
Y APE ++ + T+ D++S G ++ E+ + +
Sbjct: 198 WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 30 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 88 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 139
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T Y
Sbjct: 140 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYR 194
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSG 246
APE + DI+S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 22 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 131
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 29 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 138
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 29 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 138
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 139 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 193
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 27 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 84
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 85 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 136
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 137 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 191
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 78
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 79 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 130
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 131 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 185
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 22 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 80 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 131
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 66 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 175
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 230
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 22/207 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L + AIK LS +++ K E+ ++ + H+N+
Sbjct: 66 NLKPIGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 175
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 176 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 230
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIV 244
APE + DI+S G ++ E+V
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 77 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 127 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 181
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 77 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 127 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 181
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ + AIK LS +++ K E+ ++ + H+N+
Sbjct: 33 NLKPIGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 91 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 142
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 143 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 197
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
APE + D++S G ++ E+V +
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENLV 103
PI +G + + L G A+K LS +++ K E+ ++ + H+N++
Sbjct: 27 LKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNII 84
Query: 104 KLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
L +E + + L + +L Q + +++ S + + G
Sbjct: 85 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--------HMELDHERMSYLLYQMLCG 136
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
+ LH IIHRD+K SNI++ D T KI DFGLA+ N + T T Y A
Sbjct: 137 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF--MMTPYVVTRYYRA 191
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVSG 246
PE + DI+S G ++ E+V G
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 22/210 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ AIK LS +++ K E+ ++ + H+N+
Sbjct: 22 NLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 80 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 131
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T T Y
Sbjct: 132 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYR 186
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
APE + D++S G ++ E+V +
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 22/208 (10%)
Query: 46 FSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENLV 103
PI +G + + L G A+K LS +++ K E+ ++ + H+N++
Sbjct: 29 LKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNII 86
Query: 104 KLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIARG 158
L +E + + L + +L Q + +++ S + + G
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--------HMELDHERMSYLLYQMLCG 138
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLA 218
+ LH IIHRD+K SNI++ D T KI DFGLA+ N + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF--MMTPYVVTRYYRA 193
Query: 219 PEYAIRGQVTRKADIYSFGVLLVEIVSG 246
PE + DI+S G ++ E+V G
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ VY + L L+ GG + + + + I G+
Sbjct: 78 TLHE----------VYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 93/218 (42%), Gaps = 32/218 (14%)
Query: 43 TDDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAE--------SRQGVKEFLTEIQV 93
+ +S ++ +G G FG V+ K+ K +K + E + + EI +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 94 ISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLI----GGGHHYSNIQFSWRTRS 149
+S +EH N++K V + EN Q ++ G ++ I R
Sbjct: 83 LSRVEHANIIK-------------VLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDE 129
Query: 150 RICIGIARGLAFLHEEVR-PHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVST 208
+ I R L +R IIHRDIK NI++ +D T K+ DFG A + +
Sbjct: 130 PLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT- 188
Query: 209 RVAGTIGYLAPEYAIRGQVTR--KADIYSFGVLLVEIV 244
GTI Y APE + G R + +++S GV L +V
Sbjct: 189 -FCGTIEYCAPE-VLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 51 KIGEGGFGSVYKGRLKD---GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYG 107
++G G FG V+ R+KD G A+K + E + + E+ + + +V LYG
Sbjct: 65 RVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYG 117
Query: 108 CCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-RGLAFLHEEV 166
EG + LE SL Q + + R+ +G A GL +LH
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRALYYLGQALEGLEYLHTR- 169
Query: 167 RPHIIHRDIKASNILLDKDLT-PKISDFGLA-KLIPANMTH---VSTRVAGTIGYLAPEY 221
I+H D+KA N+LL D + + DFG A L P + + GT ++APE
Sbjct: 170 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 227
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
+ K DI+S +++ +++G
Sbjct: 228 VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 52 IGEGGFGSVYK------GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKL 105
IG+G F V + G+ KI + ++ ++ E + ++H ++V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 106 YGCCVEGNHRILVYNYLENNSLAQTLI---GGGHHYSNIQFSWRTRSRICIGIARGLAFL 162
+V+ +++ L ++ G YS S R I L +
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ-----ILEALRYC 146
Query: 163 HEEVRPHIIHRDIKASNILL---DKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAP 219
H+ +IIHRD+K N+LL + K+ DFG+A + + RV GT ++AP
Sbjct: 147 HDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAP 202
Query: 220 EYAIRGQVTRKADIYSFGVLLVEIVSG 246
E R + D++ GV+L ++SG
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 30/211 (14%)
Query: 51 KIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVISEIEHENLV 103
++G G F V K R K G A K + + SR+GV ++ E+ ++ EI+H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 104 KLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRICIGIARGL 159
L+ IL+ L+ GG + + + + I G+
Sbjct: 78 TLHEVYENKTDVILILE----------LVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 160 AFLHEEVRPHIIHRDIKASNI-LLDKDLTP---KISDFGLAKLIPANMTHVSTRVAGTIG 215
+LH I H D+K NI LLD+++ KI DFGLA I + + + GT
Sbjct: 128 YYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPE 182
Query: 216 YLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
++APE + +AD++S GV+ ++SG
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 51 KIGEGGFGSVYKGRLKD---GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYG 107
++G G FG V+ R+KD G A+K + E + + E+ + + +V LYG
Sbjct: 81 RVGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYG 133
Query: 108 CCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-RGLAFLHEEV 166
EG + LE SL Q + + R+ +G A GL +LH
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRALYYLGQALEGLEYLHTR- 185
Query: 167 RPHIIHRDIKASNILLDKDLT-PKISDFGLAKLIPANMTHVST----RVAGTIGYLAPEY 221
I+H D+KA N+LL D + + DFG A + + S + GT ++APE
Sbjct: 186 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 243
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
+ K DI+S +++ +++G
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 134 GGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILL---DK 184
GG +S IQ F+ R + I I + FLH +I HRD+K N+L +K
Sbjct: 91 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEK 147
Query: 185 DLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIV 244
D K++DFG AK N T Y+APE + + D++S GV++ ++
Sbjct: 148 DAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 204
Query: 245 SG 246
G
Sbjct: 205 CG 206
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 31/219 (14%)
Query: 44 DDFSPI-NKIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVIS 95
+DF I ++G G F V K R K G A K + S SR+GV +E E+ ++
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 96 EIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSRI 151
++ H N++ L+ VY + L L+ GG + + S +
Sbjct: 71 QVLHPNIITLHD----------VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSF 120
Query: 152 CIGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TP--KISDFGLAKLIPANMTHVS 207
I G+ +LH + I H D+K NI LLDK++ P K+ DFGLA I +
Sbjct: 121 IKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF-- 175
Query: 208 TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 40/226 (17%)
Query: 43 TDDFSPINKIGEGGFGSVYK--GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI--- 97
T +F + KIG G FGSV+K RL DG I AIK S++ + + E + E+
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 62
Query: 98 ----EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR-IC 152
+H ++V+ + E +H ++ Y SLA + +Y + + + +
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLL 119
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKIS-------DFGLAKLI--PANM 203
+ + RGL ++H ++H DIK SNI + + P + D+ K++ ++
Sbjct: 120 LQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 176
Query: 204 THVSTRVA------GTIGYLAPEYAIRGQVTR--KADIYSFGVLLV 241
HV TR++ G +LA E ++ T KADI++ + +V
Sbjct: 177 GHV-TRISSPQVEEGDSRFLANE-VLQENYTHLPKADIFALALTVV 220
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 134 GGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILL---DK 184
GG +S IQ F+ R + I I + FLH +I HRD+K N+L +K
Sbjct: 110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEK 166
Query: 185 DLTPKISDFGLAKLIPANMTHVSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIV 244
D K++DFG AK N T Y+APE + + D++S GV++ ++
Sbjct: 167 DAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 223
Query: 245 SG 246
G
Sbjct: 224 CG 225
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 40/226 (17%)
Query: 43 TDDFSPINKIGEGGFGSVYK--GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI--- 97
T +F + KIG G FGSV+K RL DG I AIK S++ + + E + E+
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 60
Query: 98 ----EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR-IC 152
+H ++V+ + E +H ++ Y SLA + +Y + + + +
Sbjct: 61 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLL 117
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKIS-------DFGLAKLI--PANM 203
+ + RGL ++H ++H DIK SNI + + P + D+ K++ ++
Sbjct: 118 LQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 174
Query: 204 THVSTRVA------GTIGYLAPEYAIRGQVTR--KADIYSFGVLLV 241
HV TR++ G +LA E ++ T KADI++ + +V
Sbjct: 175 GHV-TRISSPQVEEGDSRFLANE-VLQENYTHLPKADIFALALTVV 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 51 KIGEGGFGSVYKGRLKD---GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENLVKLYG 107
++G G FG V+ R+KD G A+K + E + + E+ + + +V LYG
Sbjct: 79 RLGRGSFGEVH--RMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYG 131
Query: 108 CCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA-RGLAFLHEEV 166
EG + LE SL Q + + R+ +G A GL +LH
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLI-------KQMGCLPEDRALYYLGQALEGLEYLHTR- 183
Query: 167 RPHIIHRDIKASNILLDKDLT-PKISDFGLAKLIPANMTHVST----RVAGTIGYLAPEY 221
I+H D+KA N+LL D + + DFG A + + S + GT ++APE
Sbjct: 184 --RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV 241
Query: 222 AIRGQVTRKADIYSFGVLLVEIVSG 246
+ K DI+S +++ +++G
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 40/226 (17%)
Query: 43 TDDFSPINKIGEGGFGSVYK--GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI--- 97
T +F + KIG G FGSV+K RL DG I AIK S++ + + E + E+
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 62
Query: 98 ----EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR-IC 152
+H ++V+ + E +H ++ Y SLA + +Y + + + +
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLL 119
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKIS-------DFGLAKLI--PANM 203
+ + RGL ++H ++H DIK SNI + + P + D+ K++ ++
Sbjct: 120 LQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 176
Query: 204 THVSTRVA------GTIGYLAPEYAIRGQVTR--KADIYSFGVLLV 241
HV TR++ G +LA E ++ T KADI++ + +V
Sbjct: 177 GHV-TRISSPQVEEGDSRFLANE-VLQENYTHLPKADIFALALTVV 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 40/226 (17%)
Query: 43 TDDFSPINKIGEGGFGSVYK--GRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEI--- 97
T +F + KIG G FGSV+K RL DG I AIK S++ + + E + E+
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIK----RSKKPLAGSVDEQNALREVYAH 64
Query: 98 ----EHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSR-IC 152
+H ++V+ + E +H ++ Y SLA + +Y + + + +
Sbjct: 65 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI---SENYRIMSYFKEAELKDLL 121
Query: 153 IGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKIS-------DFGLAKLI--PANM 203
+ + RGL ++H ++H DIK SNI + + P + D+ K++ ++
Sbjct: 122 LQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL 178
Query: 204 THVSTRVA------GTIGYLAPEYAIRGQVTR--KADIYSFGVLLV 241
HV TR++ G +LA E ++ T KADI++ + +V
Sbjct: 179 GHV-TRISSPQVEEGDSRFLANE-VLQENYTHLPKADIFALALTVV 222
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 43 TDDFSPI-NKIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVI 94
+DF I ++G G F V K R K G A K + S SR+GV +E E+ ++
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSR 150
++ H N++ L+ VY + L L+ GG + + S +
Sbjct: 70 RQVLHHNVITLHD----------VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TP--KISDFGLAKLIPANMTHV 206
I G+ +LH + I H D+K NI LLDK++ P K+ DFGLA I +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 207 STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 43 TDDFSPI-NKIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVI 94
+DF I ++G G F V K R K G A K + S SR+GV +E E+ ++
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSR 150
++ H N++ L+ VY + L L+ GG + + S +
Sbjct: 70 RQVLHHNVITLHD----------VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TP--KISDFGLAKLIPANMTHV 206
I G+ +LH + I H D+K NI LLDK++ P K+ DFGLA I +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 207 STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 43 TDDFSPI-NKIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVI 94
+DF I ++G G F V K R K G A K + S SR+GV +E E+ ++
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSR 150
++ H N++ L+ VY + L L+ GG + + S +
Sbjct: 70 RQVLHHNVITLHD----------VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TP--KISDFGLAKLIPANMTHV 206
I G+ +LH + I H D+K NI LLDK++ P K+ DFGLA I +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 207 STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 43 TDDFSPI-NKIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVI 94
+DF I ++G G F V K R K G A K + S SR+GV +E E+ ++
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSR 150
++ H N++ L+ VY + L L+ GG + + S +
Sbjct: 70 RQVLHHNVITLHD----------VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TP--KISDFGLAKLIPANMTHV 206
I G+ +LH + I H D+K NI LLDK++ P K+ DFGLA I +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 207 STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 43 TDDFSPI-NKIGEGGFGSVYKGRLKD-GKIAAIKVL----SAESRQGV--KEFLTEIQVI 94
+DF I ++G G F V K R K G A K + S SR+GV +E E+ ++
Sbjct: 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 95 SEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNI----QFSWRTRSR 150
++ H N++ L+ VY + L L+ GG + + S +
Sbjct: 70 RQVLHHNVITLHD----------VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 151 ICIGIARGLAFLHEEVRPHIIHRDIKASNI-LLDKDL-TP--KISDFGLAKLIPANMTHV 206
I G+ +LH + I H D+K NI LLDK++ P K+ DFGLA I +
Sbjct: 120 FIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF- 175
Query: 207 STRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + +AD++S GV+ ++SG
Sbjct: 176 -KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
APE + DI+S G ++ E+V +
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 34 YSYKE-LSIATDDFSPINKIGEGGFGSVYKGRLKD---GKIAAIKVLSAESRQGVKEFLT 89
Y Y+E + AT ++G G FG V+ R++D G A+K + E +
Sbjct: 67 YEYREEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRA-----E 115
Query: 90 EIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS 149
E+ + + +V LYG EG + LE SL Q + G + R+
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED-------RA 168
Query: 150 RICIGIA-RGLAFLHEEVRPHIIHRDIKASNILLDKDLT-PKISDFGLAK-LIPANMTH- 205
+G A GL +LH I+H D+KA N+LL D + + DFG A L P +
Sbjct: 169 LYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKD 225
Query: 206 --VSTRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + K D++S +++ +++G
Sbjct: 226 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 34 YSYKE-LSIATDDFSPINKIGEGGFGSVYKGRLKD---GKIAAIKVLSAESRQGVKEFLT 89
Y Y+E + AT ++G G FG V+ R++D G A+K + E +
Sbjct: 86 YEYREEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRA-----E 134
Query: 90 EIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRS 149
E+ + + +V LYG EG + LE SL Q + G + R+
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPED-------RA 187
Query: 150 RICIGIA-RGLAFLHEEVRPHIIHRDIKASNILLDKDLT-PKISDFGLAKLIPANMTHVS 207
+G A GL +LH I+H D+KA N+LL D + + DFG A + + S
Sbjct: 188 LYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKS 244
Query: 208 ----TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLVEIVSG 246
+ GT ++APE + K D++S +++ +++G
Sbjct: 245 LLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 52 IGEGGFGSV-YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE-HENLVKLYGCC 109
+G G G+V ++G + +A ++L L EI++++E + H N+++ Y C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY--C 76
Query: 110 VEGNHRILVYNYLE--NNSLAQTLIGGGHHYSNIQFSWRTRS-RICIGIARGLAFLHEEV 166
E R L Y LE N +L + N++ + IA G+A LH
Sbjct: 77 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 134
Query: 167 RPHIIHRDIKASNILLD-------------KDLTPKISDFGLAKLIPANMTHVSTRV--- 210
IIHRD+K NIL+ ++L ISDFGL K + + + T +
Sbjct: 135 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 211 AGTIGYLAPE-------YAIRGQVTRKADIYSFGVLLVEIVS 245
+GT G+ APE + ++TR DI+S G + I+S
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 60/252 (23%)
Query: 36 YKELSIATDDFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVKEFLTE---IQ 92
Y+ + ++ F +KIGEG F SVY A ++V E + +K + I+
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLA------TAQLQV-GPEEKIALKHLIPTSHPIR 65
Query: 93 VISEIE-------HENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSW 145
+ +E++ +N++ + C + +H ++ YLE+ S L S+
Sbjct: 66 IAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS---------LSF 116
Query: 146 RTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDKDLTP-KISDFGLAK------- 197
+ + + + L +H+ I+HRD+K SN L ++ L + DFGLA+
Sbjct: 117 QEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173
Query: 198 ---------------------LIPANMTHVSTRVAGTIGYLAPEYAIR-GQVTRKADIYS 235
+ + V+ R AGT G+ APE + T D++S
Sbjct: 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPR-AGTPGFRAPEVLTKCPNQTTAIDMWS 232
Query: 236 FGVLLVEIVSGR 247
GV+ + ++SGR
Sbjct: 233 AGVIFLSLLSGR 244
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 51/239 (21%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKDG-KIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHE 100
D++ + IG G +G VY K+ K AIK ++ E K L EI +++ ++ +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 101 NLVKLYGCCVEGN----HRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIA 156
+++L+ + + + + + ++ L + + I + + I +
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLF------KTPIFLTEQHVKTILYNLL 141
Query: 157 RGLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLI----------------- 199
G F+HE IIHRD+K +N LL++D + KI DFGLA+ I
Sbjct: 142 LGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEE 198
Query: 200 -----PAN-------MTHVSTRVAGTIGYLAPEYA-IRGQVTRKADIYSFGVLLVEIVS 245
P N +HV TR Y APE ++ T DI+S G + E+++
Sbjct: 199 NEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 34/218 (15%)
Query: 52 IGEGGFGSV-YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE-HENLVKLYGCC 109
+G G G+V ++G + +A ++L L EI++++E + H N+++ Y C
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY--C 94
Query: 110 VEGNHRILVYNYLE--NNSLAQTLIGGGHHYSNIQFSWRTRS-RICIGIARGLAFLHEEV 166
E R L Y LE N +L + N++ + IA G+A LH
Sbjct: 95 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 152
Query: 167 RPHIIHRDIKASNILLD-------------KDLTPKISDFGLAKLIPANMTHVSTRV--- 210
IIHRD+K NIL+ ++L ISDFGL K + + +
Sbjct: 153 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 211 AGTIGYLAPEY---AIRGQVTRKADIYSFGVLLVEIVS 245
+GT G+ APE + + ++TR DI+S G + I+S
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 99/218 (45%), Gaps = 34/218 (15%)
Query: 52 IGEGGFGSV-YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE-HENLVKLYGCC 109
+G G G+V ++G + +A ++L L EI++++E + H N+++ Y C
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY--C 94
Query: 110 VEGNHRILVYNYLE--NNSLAQTLIGGGHHYSNIQFSWRTRS-RICIGIARGLAFLHEEV 166
E R L Y LE N +L + N++ + IA G+A LH
Sbjct: 95 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 152
Query: 167 RPHIIHRDIKASNILLD-------------KDLTPKISDFGLAKLIPANMTHVSTRV--- 210
IIHRD+K NIL+ ++L ISDFGL K + + +
Sbjct: 153 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 211 AGTIGYLAPEY---AIRGQVTRKADIYSFGVLLVEIVS 245
+GT G+ APE + + ++TR DI+S G + I+S
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 45 DFSPINKIGEGGFGSVYKGRLKDGKIAAIKVLSA--ESRQGVKEFLTEIQVISEIEHENL 102
+ PI +G + Y L+ AIK LS +++ K E+ ++ + H+N+
Sbjct: 28 NLKPIGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 103 VKLYGC-----CVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTRSRICIGIAR 157
+ L +E + + L + +L Q + H + S+ +C
Sbjct: 86 IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHE---RMSYLLYQMLC----- 137
Query: 158 GLAFLHEEVRPHIIHRDIKASNILLDKDLTPKISDFGLAKLIPANMTHVSTRVAGTIGYL 217
G+ LH IIHRD+K SNI++ D T KI DFGLA+ A + + T Y
Sbjct: 138 GIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYR 192
Query: 218 APEYAIRGQVTRKADIYSFGVLLVEIVSGR 247
APE + D++S G ++ E+V +
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 51 KIGEGGFGSVYKGRLKDGKIAAIKVLSAESRQGVK-EFLTEIQVISEIEHENLVKLYGCC 109
K+G G +G VYK + KDGK L G+ EI ++ E++H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 110 VEGNHR--ILVYNYLENN--SLAQTLIGGGHHYSNIQFSWRTRSRICIGIARGLAFLHEE 165
+ R L+++Y E++ + + + +Q + I G+ +LH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 166 VRPHIIHRDIKASNILLDKDLTP----KISDFGLAKLIPANMTHVS--TRVAGTIGYLAP 219
++HRD+K +NIL+ + KI+D G A+L + + ++ V T Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 220 EYAIRGQ-VTRKADIYSFGVLLVEIVSG 246
E + + T+ DI++ G + E+++
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 44 DDFSPINKIGEGGFGSVYKGRLKD-GKIAAIKVLSAESRQGVKEFLTEIQVISEIEHENL 102
D F G+G FG+V G+ K G AIK + + R +E L +Q ++ + H N+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLAVLHHPNI 81
Query: 103 VKL--YGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWRTR--SRICIGIARG 158
V+L Y + R +Y + + TL +Y Q + + R
Sbjct: 82 VQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRS 141
Query: 159 LAFLHEEVRPHIIHRDIKASNILLDK-DLTPKISDFGLA-KLIPA--NMTHVSTRVAGTI 214
+ LH ++ HRDIK N+L+++ D T K+ DFG A KL P+ N+ ++ +R
Sbjct: 142 IGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY---- 196
Query: 215 GYLAPEYAIRGQ-VTRKADIYSFGVLLVEIVSG 246
Y APE Q T DI+S G + E++ G
Sbjct: 197 -YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 7 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 66
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 67 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 121
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 122 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 181
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 182 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 8 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 67
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 68 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 182
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 183 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 27 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 86
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 87 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 141
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 142 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 202 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 7 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 66
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 67 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 121
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 122 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 181
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 182 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 8 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 67
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 68 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 182
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 183 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 35 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 94
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 95 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 149
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 150 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 209
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 210 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 8 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 67
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 68 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 122
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 182
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 183 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 20 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 79
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 80 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 134
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 194
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 195 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 20 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 79
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 80 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 134
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 194
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 195 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 35 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 94
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 95 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 149
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 150 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 209
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 210 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 21 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 80
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 81 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 135
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 195
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 196 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 20 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 79
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 80 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 134
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 194
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 195 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 20 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 79
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 80 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 134
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 194
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 195 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 21 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 80
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 81 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 135
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 195
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 196 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 21 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 80
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 81 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 135
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 195
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 196 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 40 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 99
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 100 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 154
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 155 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 214
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 215 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 94/227 (41%), Gaps = 16/227 (7%)
Query: 28 IHNVKLYSYKELSIATDDFSPINKIGEGGFGSVYKG-RLKDGKIAAIKVLSAESRQGVKE 86
+H KL KE + +G GGFGSVY G R+ D AIK + + E
Sbjct: 21 LHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 80
Query: 87 FLTEIQVISEIEHENLVKLYGCCVEGNHRILVYNYLENNSLAQTLIGGGHHYSNIQFSWR 146
+V E+ L+K G R+L ++ E ++ ++
Sbjct: 81 LPNGTRVPMEV---VLLKKVSSGFSGVIRLL--DWFERPDSFVLILERPEPVQDLFDFIT 135
Query: 147 TRSRICIGIARGLAFLHEEVRPH-----IIHRDIKASNILLDKDLTP-KISDFGLAKLIP 200
R + +AR + E H ++HRDIK NIL+D + K+ DFG L+
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 195
Query: 201 ANMTHVSTRVAGTIGYLAPEYAIRGQV-TRKADIYSFGVLLVEIVSG 246
V T GT Y PE+ + R A ++S G+LL ++V G
Sbjct: 196 DT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 38/222 (17%)
Query: 52 IGEGGFGSV-YKGRLKDGKIAAIKVLSAESRQGVKEFLTEIQVISEIE-HENLVKLYGCC 109
+G G G+V ++G + +A ++L L EI++++E + H N+++ Y C
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRYY--C 76
Query: 110 VEGNHRILVYNYLE--NNSLAQTLIGGGHHYSNIQFSWRTRS-RICIGIARGLAFLHEEV 166
E R L Y LE N +L + N++ + IA G+A LH
Sbjct: 77 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 134
Query: 167 RPHIIHRDIKASNILLD-------------KDLTPKISDFGLAKLIPANMTHVSTRV--- 210
IIHRD+K NIL+ ++L ISDFGL K + + +
Sbjct: 135 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 211 AGTIGYLAPE-------YAIRGQVTRKADIYSFGVLLVEIVS 245
+GT G+ APE + ++TR DI+S G + I+S
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 132 IGGGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK- 184
+ GG +S IQ F+ R S I I + +LH +I HRD+K N+L
Sbjct: 95 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 151
Query: 185 --DLTPKISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLV 241
+ K++DFG AK +H S T T Y+APE + + D++S GV++
Sbjct: 152 RPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 208
Query: 242 EIVSG 246
++ G
Sbjct: 209 ILLCG 213
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 132 IGGGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK- 184
+ GG +S IQ F+ R S I I + +LH +I HRD+K N+L
Sbjct: 141 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 197
Query: 185 --DLTPKISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLV 241
+ K++DFG AK +H S T T Y+APE + + D++S GV++
Sbjct: 198 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 254
Query: 242 EIVSG 246
++ G
Sbjct: 255 ILLCG 259
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 132 IGGGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK- 184
+ GG +S IQ F+ R S I I + +LH +I HRD+K N+L
Sbjct: 102 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 158
Query: 185 --DLTPKISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLV 241
+ K++DFG AK +H S T T Y+APE + + D++S GV++
Sbjct: 159 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 215
Query: 242 EIVSG 246
++ G
Sbjct: 216 ILLCG 220
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 132 IGGGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK- 184
+ GG +S IQ F+ R S I I + +LH +I HRD+K N+L
Sbjct: 97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 153
Query: 185 --DLTPKISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLV 241
+ K++DFG AK +H S T T Y+APE + + D++S GV++
Sbjct: 154 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 210
Query: 242 EIVSG 246
++ G
Sbjct: 211 ILLCG 215
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 132 IGGGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK- 184
+ GG +S IQ F+ R S I I + +LH +I HRD+K N+L
Sbjct: 101 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 157
Query: 185 --DLTPKISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLV 241
+ K++DFG AK +H S T T Y+APE + + D++S GV++
Sbjct: 158 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 214
Query: 242 EIVSG 246
++ G
Sbjct: 215 ILLCG 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 132 IGGGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK- 184
+ GG +S IQ F+ R S I I + +LH +I HRD+K N+L
Sbjct: 147 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 203
Query: 185 --DLTPKISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLV 241
+ K++DFG AK +H S T T Y+APE + + D++S GV++
Sbjct: 204 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 260
Query: 242 EIVSG 246
++ G
Sbjct: 261 ILLCG 265
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 132 IGGGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK- 184
+ GG +S IQ F+ R S I I + +LH +I HRD+K N+L
Sbjct: 96 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 152
Query: 185 --DLTPKISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLV 241
+ K++DFG AK +H S T T Y+APE + + D++S GV++
Sbjct: 153 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 209
Query: 242 EIVSG 246
++ G
Sbjct: 210 ILLCG 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 132 IGGGHHYSNIQ------FSWRTRSRICIGIARGLAFLHEEVRPHIIHRDIKASNILLDK- 184
+ GG +S IQ F+ R S I I + +LH +I HRD+K N+L
Sbjct: 97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK 153
Query: 185 --DLTPKISDFGLAKLIPANMTHVS-TRVAGTIGYLAPEYAIRGQVTRKADIYSFGVLLV 241
+ K++DFG AK +H S T T Y+APE + + D++S GV++
Sbjct: 154 RPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 210
Query: 242 EIVSG 246
++ G
Sbjct: 211 ILLCG 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,848,641
Number of Sequences: 62578
Number of extensions: 456308
Number of successful extensions: 3905
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 1147
Number of HSP's gapped (non-prelim): 1231
length of query: 391
length of database: 14,973,337
effective HSP length: 101
effective length of query: 290
effective length of database: 8,652,959
effective search space: 2509358110
effective search space used: 2509358110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)