Query 016348
Match_columns 391
No_of_seqs 281 out of 1915
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 06:02:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016348.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016348hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 3E-41 6.4E-46 330.3 34.7 294 96-390 46-350 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 3.2E-39 7E-44 310.5 32.0 293 99-391 2-296 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 1.3E-41 2.9E-46 322.0 13.6 292 95-391 13-310 (316)
4 KOG1443 Predicted integral mem 99.9 4.2E-26 9.1E-31 209.1 22.1 292 91-389 8-316 (349)
5 PLN00411 nodulin MtN21 family 99.9 3E-25 6.5E-30 217.1 29.7 280 102-390 16-330 (358)
6 PF08449 UAA: UAA transporter 99.9 1.1E-24 2.4E-29 209.6 30.6 283 104-391 5-300 (303)
7 PRK11272 putative DMT superfam 99.9 4.8E-24 1E-28 204.1 33.3 270 105-390 14-287 (292)
8 KOG1444 Nucleotide-sugar trans 99.9 1.4E-24 3.1E-29 201.8 25.0 283 104-390 17-302 (314)
9 PRK11689 aromatic amino acid e 99.9 9.9E-24 2.1E-28 202.3 31.3 254 112-386 17-285 (295)
10 TIGR00950 2A78 Carboxylate/Ami 99.9 7.6E-24 1.7E-28 198.9 28.5 253 114-383 4-259 (260)
11 PRK11453 O-acetylserine/cystei 99.9 4.3E-23 9.4E-28 198.2 31.7 266 110-388 15-287 (299)
12 PRK15430 putative chlorampheni 99.9 1.8E-22 3.9E-27 193.6 30.8 271 99-386 8-283 (296)
13 PRK10532 threonine and homoser 99.9 3.1E-22 6.7E-27 191.7 31.4 267 99-389 12-282 (293)
14 PF06027 DUF914: Eukaryotic pr 99.9 1.9E-21 4.2E-26 186.9 28.1 270 111-389 25-306 (334)
15 TIGR03340 phn_DUF6 phosphonate 99.9 2.6E-20 5.7E-25 177.3 26.7 267 106-385 8-280 (281)
16 COG0697 RhaT Permeases of the 99.8 4.7E-18 1E-22 161.1 33.0 276 101-390 9-289 (292)
17 TIGR00688 rarD rarD protein. T 99.8 6.1E-18 1.3E-22 158.8 27.2 244 102-363 5-255 (256)
18 KOG1442 GDP-fucose transporter 99.8 2.3E-20 5E-25 168.9 5.3 290 97-391 26-330 (347)
19 KOG1581 UDP-galactose transpor 99.8 9.8E-17 2.1E-21 147.9 25.7 288 95-389 10-314 (327)
20 COG5070 VRG4 Nucleotide-sugar 99.8 6E-18 1.3E-22 149.0 15.9 274 105-390 12-298 (309)
21 KOG3912 Predicted integral mem 99.8 1.3E-16 2.8E-21 145.1 20.3 279 110-389 14-335 (372)
22 PF03151 TPT: Triose-phosphate 99.7 1.3E-16 2.9E-21 137.7 15.9 146 243-388 1-153 (153)
23 KOG1580 UDP-galactose transpor 99.7 8E-17 1.7E-21 143.0 11.9 254 125-385 50-310 (337)
24 TIGR00776 RhaT RhaT L-rhamnose 99.7 2.2E-14 4.8E-19 137.2 28.9 252 113-389 15-289 (290)
25 COG5006 rhtA Threonine/homoser 99.7 2.8E-14 6E-19 128.5 26.4 242 117-384 30-278 (292)
26 KOG2765 Predicted membrane pro 99.7 3E-15 6.4E-20 141.6 19.5 221 163-389 160-391 (416)
27 PF04142 Nuc_sug_transp: Nucle 99.7 5.2E-15 1.1E-19 137.5 20.8 211 161-378 16-243 (244)
28 KOG1582 UDP-galactose transpor 99.7 6.4E-15 1.4E-19 133.6 18.0 287 96-390 40-334 (367)
29 KOG1583 UDP-N-acetylglucosamin 99.6 1.7E-15 3.7E-20 137.7 9.8 271 106-388 10-314 (330)
30 KOG4510 Permease of the drug/m 99.6 2.3E-16 5E-21 142.7 2.0 260 108-387 47-324 (346)
31 KOG2234 Predicted UDP-galactos 99.5 5.6E-12 1.2E-16 119.6 26.6 220 163-389 93-323 (345)
32 COG2962 RarD Predicted permeas 99.5 5.4E-11 1.2E-15 110.1 28.6 274 98-388 6-283 (293)
33 PF00892 EamA: EamA-like trans 99.2 9.9E-11 2.1E-15 96.6 9.7 119 113-232 5-124 (126)
34 TIGR00803 nst UDP-galactose tr 99.2 1.7E-10 3.8E-15 106.0 11.6 191 186-386 2-222 (222)
35 KOG2766 Predicted membrane pro 99.2 1.3E-11 2.8E-16 111.4 3.0 260 112-388 31-299 (336)
36 COG2510 Predicted membrane pro 99.0 6.9E-09 1.5E-13 84.4 11.3 121 113-234 17-139 (140)
37 PF13536 EmrE: Multidrug resis 98.9 4E-09 8.7E-14 86.5 7.8 77 162-239 34-111 (113)
38 PF00892 EamA: EamA-like trans 98.8 4.9E-08 1.1E-12 80.4 9.5 125 252-387 1-125 (126)
39 KOG4314 Predicted carbohydrate 98.7 7.3E-08 1.6E-12 84.2 10.3 216 162-386 53-274 (290)
40 PF06800 Sugar_transport: Suga 98.7 3.3E-06 7.2E-11 78.9 20.6 208 160-385 43-268 (269)
41 TIGR00950 2A78 Carboxylate/Ami 98.7 1E-06 2.3E-11 82.4 17.1 131 99-230 128-260 (260)
42 COG2510 Predicted membrane pro 98.7 1.5E-07 3.2E-12 76.8 8.9 136 243-388 4-139 (140)
43 PRK15430 putative chlorampheni 98.5 5.9E-06 1.3E-10 79.3 18.3 143 236-387 2-144 (296)
44 TIGR03340 phn_DUF6 phosphonate 98.5 4.2E-06 9.2E-11 79.6 15.2 132 244-387 3-134 (281)
45 PRK15051 4-amino-4-deoxy-L-ara 98.5 3E-06 6.5E-11 69.1 12.0 65 170-234 45-109 (111)
46 PLN00411 nodulin MtN21 family 98.5 5.7E-06 1.2E-10 81.4 15.8 134 100-234 190-328 (358)
47 PRK10532 threonine and homoser 98.4 8.2E-06 1.8E-10 78.2 16.3 131 100-233 149-280 (293)
48 TIGR00688 rarD rarD protein. T 98.4 1.8E-05 3.9E-10 74.1 17.0 139 242-386 2-140 (256)
49 PRK11689 aromatic amino acid e 98.4 1.1E-05 2.3E-10 77.5 14.8 131 100-234 157-287 (295)
50 PRK11272 putative DMT superfam 98.3 1.4E-05 3E-10 76.5 15.1 134 100-235 151-286 (292)
51 PF05653 Mg_trans_NIPA: Magnes 98.2 2.8E-05 6.1E-10 74.6 13.4 63 171-233 59-121 (300)
52 PRK02971 4-amino-4-deoxy-L-ara 98.2 7E-05 1.5E-09 62.7 13.5 121 242-390 2-124 (129)
53 PRK11453 O-acetylserine/cystei 98.1 0.00013 2.8E-09 70.1 16.2 136 99-234 143-287 (299)
54 TIGR00817 tpt Tpt phosphate/ph 97.9 0.0001 2.3E-09 70.8 12.3 133 100-233 146-292 (302)
55 PRK13499 rhamnose-proton sympo 97.9 0.0081 1.8E-07 58.5 24.5 228 158-387 69-340 (345)
56 PF03151 TPT: Triose-phosphate 97.9 0.00064 1.4E-08 58.2 14.7 130 103-232 4-151 (153)
57 COG0697 RhaT Permeases of the 97.8 0.00075 1.6E-08 63.5 16.0 133 99-235 154-288 (292)
58 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00032 6.9E-09 67.2 12.6 127 100-233 153-287 (290)
59 PTZ00343 triose or hexose phos 97.7 0.0013 2.8E-08 64.7 16.0 134 99-232 194-346 (350)
60 PRK02971 4-amino-4-deoxy-L-ara 97.7 0.00021 4.6E-09 59.8 8.0 71 165-235 51-123 (129)
61 COG5006 rhtA Threonine/homoser 97.6 0.0013 2.9E-08 60.2 13.4 132 97-231 146-279 (292)
62 PRK10452 multidrug efflux syst 97.5 0.00073 1.6E-08 55.7 9.3 70 165-234 33-103 (120)
63 PF13536 EmrE: Multidrug resis 97.5 0.0042 9E-08 50.6 13.8 58 331-389 50-107 (113)
64 PRK15051 4-amino-4-deoxy-L-ara 97.5 0.0012 2.7E-08 53.7 10.4 55 334-388 55-109 (111)
65 PRK11431 multidrug efflux syst 97.4 0.0014 3E-08 52.8 9.7 69 165-233 32-101 (105)
66 PRK09541 emrE multidrug efflux 97.4 0.0013 2.9E-08 53.4 9.2 69 166-234 34-103 (110)
67 PRK10650 multidrug efflux syst 97.4 0.0024 5.2E-08 51.7 10.6 68 165-232 38-106 (109)
68 COG2962 RarD Predicted permeas 97.4 0.0096 2.1E-07 55.9 15.8 140 240-388 5-144 (293)
69 COG2076 EmrE Membrane transpor 97.3 0.0013 2.8E-08 52.6 7.9 70 165-234 33-103 (106)
70 KOG2922 Uncharacterized conser 97.2 0.0032 6.9E-08 59.7 10.2 65 171-235 73-137 (335)
71 PF08449 UAA: UAA transporter 96.8 0.016 3.4E-07 55.8 12.3 134 100-233 155-296 (303)
72 PF00893 Multi_Drug_Res: Small 96.7 0.013 2.7E-07 46.2 8.7 59 167-225 34-93 (93)
73 PF06800 Sugar_transport: Suga 96.6 0.037 8E-07 52.0 12.4 71 159-230 193-267 (269)
74 PF06027 DUF914: Eukaryotic pr 96.6 0.036 7.9E-07 53.9 12.4 141 96-236 165-307 (334)
75 PF04142 Nuc_sug_transp: Nucle 96.5 0.014 3E-07 54.4 8.7 71 318-388 19-89 (244)
76 PRK09541 emrE multidrug efflux 96.5 0.07 1.5E-06 43.3 11.6 53 336-388 50-103 (110)
77 COG2076 EmrE Membrane transpor 96.4 0.088 1.9E-06 42.2 11.6 55 336-390 50-105 (106)
78 COG4975 GlcU Putative glucose 96.4 0.0014 3E-08 59.9 1.4 215 158-390 55-287 (288)
79 PRK11431 multidrug efflux syst 96.4 0.078 1.7E-06 42.6 11.4 54 336-389 49-103 (105)
80 PF10639 UPF0546: Uncharacteri 96.0 0.02 4.4E-07 46.5 6.3 70 162-232 42-112 (113)
81 PRK10452 multidrug efflux syst 95.9 0.16 3.5E-06 41.9 11.3 53 336-388 50-103 (120)
82 PRK10650 multidrug efflux syst 95.9 0.16 3.6E-06 41.1 11.1 52 336-387 55-107 (109)
83 TIGR00803 nst UDP-galactose tr 95.9 0.11 2.3E-06 47.6 11.3 66 166-231 156-221 (222)
84 PF04657 DUF606: Protein of un 95.8 0.37 8E-06 40.8 13.2 117 114-231 16-138 (138)
85 KOG2234 Predicted UDP-galactos 94.8 1.7 3.7E-05 42.2 15.8 69 319-387 95-163 (345)
86 PRK13499 rhamnose-proton sympo 94.5 1.3 2.9E-05 43.3 14.6 139 241-388 6-153 (345)
87 KOG4510 Permease of the drug/m 94.0 0.045 9.7E-07 50.8 3.0 116 116-232 208-323 (346)
88 PF04657 DUF606: Protein of un 93.7 2.3 5.1E-05 35.9 12.8 131 244-385 3-138 (138)
89 KOG1581 UDP-galactose transpor 93.3 1.2 2.7E-05 42.2 11.4 136 96-231 169-310 (327)
90 PF05653 Mg_trans_NIPA: Magnes 92.4 0.7 1.5E-05 44.4 8.8 49 337-385 71-119 (300)
91 PF00893 Multi_Drug_Res: Small 92.0 0.78 1.7E-05 35.9 7.1 44 336-379 49-93 (93)
92 COG3238 Uncharacterized protei 91.8 5.5 0.00012 34.1 12.3 140 241-390 4-148 (150)
93 KOG1441 Glucose-6-phosphate/ph 91.5 0.53 1.2E-05 45.4 6.7 138 94-233 158-306 (316)
94 COG3238 Uncharacterized protei 89.1 12 0.00025 32.1 12.1 118 114-232 20-144 (150)
95 KOG1580 UDP-galactose transpor 85.0 1.1 2.3E-05 41.1 3.8 70 162-231 241-310 (337)
96 KOG4314 Predicted carbohydrate 85.0 0.65 1.4E-05 41.3 2.3 55 334-388 71-125 (290)
97 PF10639 UPF0546: Uncharacteri 85.0 2.2 4.8E-05 34.7 5.2 38 348-385 74-111 (113)
98 PF07857 DUF1632: CEO family ( 83.8 3.3 7.1E-05 38.8 6.6 128 243-390 1-136 (254)
99 PF06379 RhaT: L-rhamnose-prot 82.9 47 0.001 32.4 14.1 137 241-389 6-154 (344)
100 KOG2765 Predicted membrane pro 74.4 25 0.00053 34.7 9.3 141 97-237 245-393 (416)
101 COG5070 VRG4 Nucleotide-sugar 68.9 59 0.0013 29.9 9.9 72 160-231 222-293 (309)
102 PRK02237 hypothetical protein; 68.5 14 0.0003 29.7 5.2 43 344-386 61-103 (109)
103 PF02694 UPF0060: Uncharacteri 66.3 13 0.00029 29.7 4.7 45 344-388 59-103 (107)
104 KOG1444 Nucleotide-sugar trans 63.0 52 0.0011 31.7 8.9 133 100-232 158-298 (314)
105 PF04342 DUF486: Protein of un 60.8 86 0.0019 25.1 9.3 54 179-232 52-106 (108)
106 KOG4831 Unnamed protein [Funct 60.0 14 0.00029 29.6 3.7 70 162-232 53-123 (125)
107 COG4975 GlcU Putative glucose 56.0 5 0.00011 37.2 0.8 75 156-231 204-282 (288)
108 PF04342 DUF486: Protein of un 53.1 16 0.00034 29.2 3.1 29 357-385 77-105 (108)
109 COG3169 Uncharacterized protei 52.2 1.2E+02 0.0025 24.1 10.4 33 201-233 82-114 (116)
110 PF08627 CRT-like: CRT-like; 49.0 60 0.0013 26.9 5.8 40 95-134 53-93 (130)
111 KOG3912 Predicted integral mem 41.4 67 0.0014 30.6 5.7 49 338-386 108-156 (372)
112 KOG1582 UDP-galactose transpor 39.7 1.3E+02 0.0027 28.7 7.2 78 162-239 260-337 (367)
113 PRK02237 hypothetical protein; 39.5 2E+02 0.0044 23.2 10.4 42 193-234 64-105 (109)
114 KOG1442 GDP-fucose transporter 37.5 84 0.0018 29.9 5.7 117 115-231 201-324 (347)
115 PF02694 UPF0060: Uncharacteri 34.6 2.4E+02 0.0053 22.6 9.1 41 194-234 63-103 (107)
116 PF07331 TctB: Tripartite tric 33.3 2.7E+02 0.0059 22.8 12.3 44 127-170 37-80 (141)
117 KOG2922 Uncharacterized conser 32.4 31 0.00066 33.3 2.1 36 349-384 97-132 (335)
118 PF05297 Herpes_LMP1: Herpesvi 30.0 17 0.00038 34.3 0.0 67 183-249 44-114 (381)
119 TIGR01167 LPXTG_anchor LPXTG-m 27.1 72 0.0015 19.3 2.5 24 367-390 9-32 (34)
120 KOG1583 UDP-N-acetylglucosamin 23.0 1.4E+02 0.0031 28.4 4.6 37 197-233 277-313 (330)
121 COG3169 Uncharacterized protei 22.0 4.1E+02 0.0089 21.1 10.4 50 338-387 59-114 (116)
122 PF06379 RhaT: L-rhamnose-prot 20.9 8E+02 0.017 24.1 22.2 103 160-262 71-193 (344)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=3e-41 Score=330.34 Aligned_cols=294 Identities=40% Similarity=0.669 Sum_probs=255.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCC--CHHHHHHHHHHHHHHH
Q 016348 96 QKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNT--DLEFWKTLFPVAVAHT 173 (391)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~ 173 (391)
.++++.++|+.||.+|+..+++||++++++|+|++++.+|++++.+++.+.|..+.++.|+. ++.+|+.+++.|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999999999999999999887766676655444443 3557899999999998
Q ss_pred HHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHHHHHHHHHH
Q 016348 174 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLA 253 (391)
Q Consensus 174 ~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~ 253 (391)
..+...+.|++++++++++++|+++|+++++++++++|||++++++++++++++|+.++..+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHHHHhhcCCCC-----CCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhh---hhhh-hchHHHHHHHHHHH
Q 016348 254 FVFRNIFSKKGMKGK-----SVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKT---AMSQ-IGPQFIWWVAAQSI 324 (391)
Q Consensus 254 ~a~~~v~~k~~~~~~-----~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~---~~~~-~~~~~l~~l~~~~~ 324 (391)
+++|+++.||.++++ +.+..+.+.++..++.++++|+....|++... ..|.. .... ....+++.++.+++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~-~~~~~~~~~~~~~~~~~~l~~i~~s~l 284 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWV-PVWTNYTANMTNYTKGIIIFKIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHhhhcccccchHHHHHHHHHHHH
Confidence 999999999987654 35677777777888988999988767764321 11211 0001 11234556777889
Q ss_pred HHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhcc
Q 016348 325 FYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 325 ~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
.++++|...|+++++++|.++++.+++||++++++|+++|||++++.+++|.++++.|+++|++.|
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999875
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=3.2e-39 Score=310.46 Aligned_cols=293 Identities=50% Similarity=0.839 Sum_probs=245.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016348 99 KIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVA 178 (391)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 178 (391)
++.++++.||.+|+.++++||++++++++|..++++|+.++.+++.+.|..+.+++++.++++|+.+++.|++++.++.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57789999999999999999999999999999999999998877666655444445556788899999999999999999
Q ss_pred hhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHHHHHHHHHHHHHHH
Q 016348 179 ATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRN 258 (391)
Q Consensus 179 ~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~ 258 (391)
.|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+.+...+|.+++..|++++++++++|++|+
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777788889999999999999999
Q ss_pred HHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchH-HHHHHHHHH-HHHHHHHHHHHHH
Q 016348 259 IFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQ-FIWWVAAQS-IFYHLYNQVSYMS 336 (391)
Q Consensus 259 v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~-~l~~l~~~~-~~~~l~~~~~~~~ 336 (391)
++.||.+++++.++.....++..++.+.+.|+....|++.....++.......... .+...+..+ ..++++|...+..
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML 241 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999877445666777777788888888898877776543322222211111111 222222233 3566778788889
Q ss_pred hhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhccC
Q 016348 337 LDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 391 (391)
Q Consensus 337 l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k~ 391 (391)
++++||.++++.+++||++++++|++++||+++..+++|+++++.|+++|++.|+
T Consensus 242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999998763
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=321.97 Aligned_cols=292 Identities=43% Similarity=0.680 Sum_probs=261.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCC-CHHHHHHHHHHHHH
Q 016348 95 AQKVKIGIYFATWWALNVVFNIYNKKVLN--AYPYPWLTSTLSLACGSLMMLISWATRIAEPPNT-DLEFWKTLFPVAVA 171 (391)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~nK~~l~--~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~-~~~~~~~~l~~~~~ 171 (391)
++.+...+++..||.+|++.+++||++++ +||+|++++.+|+.++.+.+.+.|..+..+.++. ++..|+.++++|++
T Consensus 13 ~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~ 92 (316)
T KOG1441|consen 13 KKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLV 92 (316)
T ss_pred chhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHH
Confidence 36777889999999999999999999999 8999999999999999999998888887665443 55678999999999
Q ss_pred HHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHHHHHHHH
Q 016348 172 HTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISN 251 (391)
Q Consensus 172 ~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 251 (391)
+++++++.|.|++|++++++|++|+++|++++++++++.+|+.++..++++++++.||.++..+|.++|+.|++.+++++
T Consensus 93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~ 172 (316)
T KOG1441|consen 93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISN 172 (316)
T ss_pred HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcC--CCCCCchhHhHHHHHHHHHHHHH-HHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHH
Q 016348 252 LAFVFRNIFSKKGM--KGKSVSGMNYYACLSILSLLILT-PFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHL 328 (391)
Q Consensus 252 l~~a~~~v~~k~~~--~~~~~~~l~~~~~~~~i~~~~l~-p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l 328 (391)
+.+++++++.|+.+ ++++.++++.+.+++.++...++ |+....|++.. . .+.... +....+.++ ...+++++
T Consensus 173 ~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~~~--~~~~~~~~~-~~sv~~f~ 247 (316)
T KOG1441|consen 173 LAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLTAP--WFVTFLILL-LNSVLAFL 247 (316)
T ss_pred HHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeeccc--cchhhHHHH-HHHHHHHH
Confidence 99999999999998 47789999999999999999888 99888888765 1 222111 112233333 34499999
Q ss_pred HHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhccC
Q 016348 329 YNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 391 (391)
Q Consensus 329 ~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k~ 391 (391)
+|+..|++++++||+|+++.|++|++++++.|+++|+|++++.|..|++++++|+++|++.|+
T Consensus 248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~ 310 (316)
T KOG1441|consen 248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKL 310 (316)
T ss_pred HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999763
No 4
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.95 E-value=4.2e-26 Score=209.14 Aligned_cols=292 Identities=20% Similarity=0.267 Sum_probs=233.8
Q ss_pred hHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHH-h-ccC---CCCCCCHHHHHHH
Q 016348 91 KSAAAQKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWA-T-RIA---EPPNTDLEFWKTL 165 (391)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~-~-~~~---~~~~~~~~~~~~~ 165 (391)
+....+++....++.+||+++++..+++|+.-.+|++|.+++.+|.++-.+......+ . +.. +.+-..+++.++.
T Consensus 8 ~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~ 87 (349)
T KOG1443|consen 8 NQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRL 87 (349)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHh
Confidence 3445566667777799999999999999999999999999999998876665332221 1 111 1222345677888
Q ss_pred HHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHH
Q 016348 166 FPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFM 245 (391)
Q Consensus 166 l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~ 245 (391)
.|.|++.+.+..++|+|+.|+++++++|.|+..++|+.+++.+|.-||+++.-.+.++++.+|+.+.+..+.++|..|+.
T Consensus 88 aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~ 167 (349)
T KOG1443|consen 88 APTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFF 167 (349)
T ss_pred hhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC------CCCchhHhHHHHHHHHHHHHHHHHHHhcchhhh--HhhhhhhhhhhchH---
Q 016348 246 GAMISNLAFVFRNIFSKKGMKG------KSVSGMNYYACLSILSLLILTPFAIAVEGPQLW--AAGYKTAMSQIGPQ--- 314 (391)
Q Consensus 246 ~~l~s~l~~a~~~v~~k~~~~~------~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~--~~~~~~~~~~~~~~--- 314 (391)
+++++.++.+++..+.+..+++ ++.+++...+ ......++|..+.+||+... ...|.. .+..
T Consensus 168 lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~---p~M~~~Ll~~~l~fEG~~~~~~s~~f~~----~d~~~~~ 240 (349)
T KOG1443|consen 168 LVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQ---PWMSIGLLPLSLLFEGLHLITSSSIFRF----QDTGLIL 240 (349)
T ss_pred HHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhh---hHHHHHHHHHHHHHcccccchhhhHHHh----cCccHHH
Confidence 9999998888887777665543 3344444443 33344567777788987643 222221 1221
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhc
Q 016348 315 -FIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQA 389 (391)
Q Consensus 315 -~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~ 389 (391)
....+.+.+..+++.-.+.|..+.+++.++.|+.+..|.+.+.++|..+.+|.++..+++|..++..|+..|.++
T Consensus 241 rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~~ 316 (349)
T KOG1443|consen 241 RVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRNE 316 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhccC
Confidence 122345667777777788888999999999999999999999999999999999999999999999999999543
No 5
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.95 E-value=3e-25 Score=217.07 Aligned_cols=280 Identities=13% Similarity=0.118 Sum_probs=200.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH-HHhcc-CCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 016348 102 IYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLIS-WATRI-AEPPNTDLEFWKTLFPVAVAHTIGHVAA 179 (391)
Q Consensus 102 ~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~-~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 179 (391)
..+++-=....++.++.|..++.--.|..+.++|+.+++++++.. +.+++ ++.++.++++|..+...|++....+.+.
T Consensus 16 ~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~ 95 (358)
T PLN00411 16 TAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITG 95 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 344444466677888889999863337888999999888766543 33322 2334444666777888888776566688
Q ss_pred hhhhcccchHHHHHHHhhHHHHHHHHHHHH------hcccCChhhHHHHHhhhhhheeeeec-cc---------------
Q 016348 180 TVSMSKVAVSFTHIIKSGEPAFSVLVSRFL------LGETFPLPVYMSLVPIIGGCALAAVT-EL--------------- 237 (391)
Q Consensus 180 ~~al~~~s~s~~~ii~~~~Pv~t~lls~l~------l~e~~~~~~~~~lll~~~Gv~l~~~~-~~--------------- 237 (391)
+.+++|++++.+.++.++.|++++++++++ +|||+++++++|++++++|+.++... +.
T Consensus 96 ~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~ 175 (358)
T PLN00411 96 YIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQ 175 (358)
T ss_pred HHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccc
Confidence 999999999999999999999999999999 69999999999999999999876531 10
Q ss_pred --------cch-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhh--hHhhhhh
Q 016348 238 --------NFN-MIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQL--WAAGYKT 306 (391)
Q Consensus 238 --------~~~-~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~--~~~~~~~ 306 (391)
..+ ..|.+++++++++|++|+++.||..++++. ......+.+.++...+.+.....|+.+. |...|..
T Consensus 176 ~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~-~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 254 (358)
T PLN00411 176 LSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPA-AFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDI 254 (358)
T ss_pred cccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-HhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccch
Confidence 112 459999999999999999999987665432 2222223334444444444444443211 1111111
Q ss_pred hhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 307 AMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 307 ~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
. ....++..+..++.+.+| ++++++.+|.+.++..+++|+++.++|++++||++++.+++|+++++.|+++.
T Consensus 255 ~----~~~i~y~~i~t~lay~lw----~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~ 326 (358)
T PLN00411 255 T----LITIVTMAIITSVYYVIH----SWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAV 326 (358)
T ss_pred H----HHHHHHHHHHHHHHHHHH----HHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHH
Confidence 0 011222223333333333 66899999999999999999999999999999999999999999999999998
Q ss_pred hhcc
Q 016348 387 SQAK 390 (391)
Q Consensus 387 ~~~k 390 (391)
++.|
T Consensus 327 ~~~~ 330 (358)
T PLN00411 327 MWGK 330 (358)
T ss_pred Hhhh
Confidence 7654
No 6
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.94 E-value=1.1e-24 Score=209.64 Aligned_cols=283 Identities=19% Similarity=0.315 Sum_probs=221.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 016348 104 FATWWALNVVFNIYNKKVLNA-Y--PYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAAT 180 (391)
Q Consensus 104 ~~~~~~~~~~~~~~nK~~l~~-f--p~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 180 (391)
+...++....+.+.++.+.+. + ++|.++++.|++...+...+...... .++.++..++.+++.++++.+...++|
T Consensus 5 ~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
T PF08449_consen 5 VAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSN 82 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHH
Confidence 445566666677778888764 2 36999999999988877554332222 122233447788999999999999999
Q ss_pred hhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecccc----c------hHHHHHHHHHH
Q 016348 181 VSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELN----F------NMIGFMGAMIS 250 (391)
Q Consensus 181 ~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~----~------~~~G~~~~l~s 250 (391)
.|++|++.+..+++|++.|+++++++.+++|||++++++++++++++|+++....|.+ . ...|+++.+++
T Consensus 83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~s 162 (303)
T PF08449_consen 83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLS 162 (303)
T ss_pred HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998765421 1 12399999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHH
Q 016348 251 NLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYN 330 (391)
Q Consensus 251 ~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~ 330 (391)
.++.+++.+++||.+++++.++.....+.+.++.++..+.....+..+. ...+... ...+..+..++..++.+++.+
T Consensus 163 l~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~-~~~~~f~--~~~p~~~~~l~~~s~~~~~g~ 239 (303)
T PF08449_consen 163 LLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEF-RSAIRFI--SAHPSVLLYLLLFSLTGALGQ 239 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHh-hHHHHHH--HHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988777777766666777877776665554221111 1111111 112345555666777777777
Q ss_pred HHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhccC
Q 016348 331 QVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 391 (391)
Q Consensus 331 ~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k~ 391 (391)
...+.++++.||++.++..+++++.++++|+++||+++++.+++|.++++.|..+|++.||
T Consensus 240 ~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~ 300 (303)
T PF08449_consen 240 FFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKK 300 (303)
T ss_pred HHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhc
Confidence 7778889999999999999999999999999999999999999999999999999988764
No 7
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.94 E-value=4.8e-24 Score=204.15 Aligned_cols=270 Identities=14% Similarity=0.153 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH-HHHHHHhhhhh
Q 016348 105 ATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAH-TIGHVAATVSM 183 (391)
Q Consensus 105 ~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~al 183 (391)
+.-...+....+..|...++.+ |..+++.|+.++.+++++....++++. .++++|+.....|.+. ..++.+.+.+.
T Consensus 14 ~~~~~iWg~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 90 (292)
T PRK11272 14 FALYIIWGSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHPL--PTLRQWLNAALIGLLLLAVGNGMVTVAE 90 (292)
T ss_pred HHHHHHHhhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444456677899999988 999999999988877654433322222 2455677777777765 56677788888
Q ss_pred -cccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeec-cccchHHHHHHHHHHHHHHHHHHHHH
Q 016348 184 -SKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVT-ELNFNMIGFMGAMISNLAFVFRNIFS 261 (391)
Q Consensus 184 -~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~-~~~~~~~G~~~~l~s~l~~a~~~v~~ 261 (391)
++++++.+.++.++.|+++++++.+ +|||++++++.+++++++|+.++..+ +.+.+..|.+++++++++||+++++.
T Consensus 91 ~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~ 169 (292)
T PRK11272 91 HQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWS 169 (292)
T ss_pred HccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999985 69999999999999999999888543 34556789999999999999999999
Q ss_pred hhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHH-HHHHHHHHHHHHHhhcc
Q 016348 262 KKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQS-IFYHLYNQVSYMSLDEI 340 (391)
Q Consensus 262 k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~l~~~~~~~~l~~~ 340 (391)
||..+++ +.....+...++..++.+.....+.+.....+... .....+..+..+ +.+.+| ++.+++.
T Consensus 170 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~l~i~~s~~~~~l~----~~~~~~~ 237 (292)
T PRK11272 170 SRLPLPV---GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSG-----FLALGYLAVFGSIIAISAY----MYLLRNV 237 (292)
T ss_pred HhcCCCc---chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHH-----HHHHHHHHHHHHHHHHHHH----HHHHhhc
Confidence 9875432 23333444556666666665443322110001111 011222223222 333344 5678999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhcc
Q 016348 341 SPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 341 s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
++.+.++..+++|+++.++|++++||++++.+++|+++++.|+++.++.+
T Consensus 238 ~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 238 RPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999876543
No 8
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=1.4e-24 Score=201.82 Aligned_cols=283 Identities=18% Similarity=0.220 Sum_probs=230.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHH--HHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 016348 104 FATWWALNVVFNIYNKKVLNAYPYPWLTST--LSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATV 181 (391)
Q Consensus 104 ~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~--~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 181 (391)
.+.+...++.+.+.||+++..++||..+.. .|.+++.+.+.+..+.|..+.++.+++..|+++|.++++.+..+....
T Consensus 17 a~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~~~ 96 (314)
T KOG1444|consen 17 ALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTGSK 96 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHccc
Confidence 344556778889999999999999987666 899999888888878888788888888899999999999999999999
Q ss_pred hhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHHHHHHHHHHHHHHHHHH
Q 016348 182 SMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFS 261 (391)
Q Consensus 182 al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~~a~~~v~~ 261 (391)
+++|++++.++++|..+|+++++.+..++|.++++..|.++....+|......+|.++|..|+.|++.++++.+.+.++.
T Consensus 97 slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v~~ 176 (314)
T KOG1444|consen 97 SLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVVYV 176 (314)
T ss_pred cccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 016348 262 KKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEIS 341 (391)
Q Consensus 262 k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s 341 (391)
||-.+..+........+-++.+++.+....+..+..+-....... ...+.++..+.++|++++..++..+++.+..|
T Consensus 177 kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~---~~~~~~~~~~~lScv~gf~isy~s~~ct~~~S 253 (314)
T KOG1444|consen 177 KKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDN---WSDSSVLVVMLLSCVMGFGISYTSFLCTRVNS 253 (314)
T ss_pred HHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 987655444433333333555555554444433321111111100 01234566778999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhC-CccchhhhHhHHHHHHHHHHHhhcc
Q 016348 342 PLTFSIGNTMKRISVIVSSIIIFH-TPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 342 ~~t~si~~~l~pv~~ii~g~l~fg-e~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
+.++++++ ++......++.+++| ++.++.+++|..+.+.|-.+|++.+
T Consensus 254 AtT~tivG-~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~ 302 (314)
T KOG1444|consen 254 ATTTTIVG-AKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT 302 (314)
T ss_pred ccceeehh-hhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence 99999999 666666666666555 5899999999999999999998764
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.94 E-value=9.9e-24 Score=202.25 Aligned_cols=254 Identities=13% Similarity=0.131 Sum_probs=179.5
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcc----cc
Q 016348 112 VVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSK----VA 187 (391)
Q Consensus 112 ~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~----~s 187 (391)
..+....|..++++| |..+.+.|+..+.+++.... +. ++.++++++..+..++.+..++.+.+.+++| .+
T Consensus 17 g~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~ 90 (295)
T PRK11689 17 STMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GF---PRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQ 90 (295)
T ss_pred HHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cc---cccccccHHHHHHHhHHHHHHHHHHHHHHHHhhcccc
Confidence 345567799999999 99999999998887765432 11 1112222344444455556777777777654 57
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecccc-----------chHHHHHHHHHHHHHHHH
Q 016348 188 VSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELN-----------FNMIGFMGAMISNLAFVF 256 (391)
Q Consensus 188 ~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~-----------~~~~G~~~~l~s~l~~a~ 256 (391)
+..+.++.++.|+++++++++++|||++++++++++++++|++++..++.+ .+..|++++++++++||.
T Consensus 91 a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~ 170 (295)
T PRK11689 91 AIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAA 170 (295)
T ss_pred chHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHH
Confidence 788899999999999999999999999999999999999999888655421 234699999999999999
Q ss_pred HHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHH
Q 016348 257 RNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMS 336 (391)
Q Consensus 257 ~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~ 336 (391)
|+++.||..++.+ +...+. ..+...+.+.....+.+. ...++... ..+++..+.+++.+.+| ++.
T Consensus 171 ~~v~~k~~~~~~~--~~~~~~---~~~~~~l~~~~~~~~~~~-~~~~~~~~-----~~l~~~~~~t~~~~~l~----~~a 235 (295)
T PRK11689 171 YCNVTRKYARGKN--GITLFF---ILTALALWIKYFLSPQPA-MVFSLPAI-----IKLLLAAAAMGFGYAAW----NVG 235 (295)
T ss_pred HHHHHhhccCCCC--chhHHH---HHHHHHHHHHHHHhcCcc-ccCCHHHH-----HHHHHHHHHHHHHHHHH----HHH
Confidence 9999999865433 333322 122223333222222111 11111110 11122222333334444 667
Q ss_pred hhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 337 LDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 337 l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
+++.+|.+.+...+++|++++++|++++||+++..+++|.++++.|+++.
T Consensus 236 l~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~ 285 (295)
T PRK11689 236 ILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLC 285 (295)
T ss_pred HHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHH
Confidence 89999999999999999999999999999999999999999999998654
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.93 E-value=7.6e-24 Score=198.88 Aligned_cols=253 Identities=16% Similarity=0.176 Sum_probs=192.5
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH-HHHHHHHhhhhhcccchHHHH
Q 016348 114 FNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVA-HTIGHVAATVSMSKVAVSFTH 192 (391)
Q Consensus 114 ~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~s~s~~~ 192 (391)
+.+..|+.+++.+.|..+.++|++++.+++.+....+ + ++++++..+..+.+ ..++..+.+.|++|++++.+.
T Consensus 4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR-----P-PLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc-----c-CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 4467799998755588999999998887765544333 1 23335555566554 578888999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecc-ccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCc
Q 016348 193 IIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTE-LNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVS 271 (391)
Q Consensus 193 ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~-~~~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~ 271 (391)
++.++.|+++++++.+++|||++++++.+++++++|+.++..++ .+.+..|++++++++++|+.++++.||..++.+.+
T Consensus 78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~ 157 (260)
T TIGR00950 78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPE 157 (260)
T ss_pred HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCch
Confidence 99999999999999999999999999999999999998876543 45567899999999999999999999987665544
Q ss_pred hhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHH-HHHHHHHHHHHHHHHhhccChhHHHHHHH
Q 016348 272 GMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAA-QSIFYHLYNQVSYMSLDEISPLTFSIGNT 350 (391)
Q Consensus 272 ~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~~l~~~~~~~~l~~~s~~t~si~~~ 350 (391)
......+...++.+++.|.....+.+... +..+ ....++.... +.+.+.+| ++.+++.++.+.++..+
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~----~~a~~~~~~~~~s~~~~ 226 (260)
T TIGR00950 158 LLQFTGWVLLLGALLLLPFAWFLGPNPQA--LSLQ-----WGALLYLGLIGTALAYFLW----NKGLTLVDPSAASILAL 226 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCc--chHH-----HHHHHHHHHHHHHHHHHHH----HHHHhcCCchHHHHHHH
Confidence 55555455667777777776544332211 1110 0011122222 22333333 66799999999999999
Q ss_pred HHHHHHHHHHHHHhCCccchhhhHhHHHHHHHH
Q 016348 351 MKRISVIVSSIIIFHTPVQPINALGAAIAILGT 383 (391)
Q Consensus 351 l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv 383 (391)
++|+++.+++++++||+++..+++|.++++.|+
T Consensus 227 ~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 227 AEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999986
No 11
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.93 E-value=4.3e-23 Score=198.20 Aligned_cols=266 Identities=13% Similarity=0.185 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH-HHHHHhhhhhcc-cc
Q 016348 110 LNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHT-IGHVAATVSMSK-VA 187 (391)
Q Consensus 110 ~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~al~~-~s 187 (391)
.+..+....|..+++++ |..+.++|+.++.+.++... ++ + +.+ ++..+..+++.. ....+.+.+++| .+
T Consensus 15 ~Wg~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~-~~-~---~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 85 (299)
T PRK11453 15 VWGLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFV-AR-P---KVP---LNLLLGYGLTISFGQFAFLFCAINFGMP 85 (299)
T ss_pred HHhhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHh-cC-C---CCc---hHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33445566799999999 99999999988765543322 11 1 111 233445555443 344466778887 68
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecc---ccchHHHHHHHHHHHHHHHHHHHHHhhc
Q 016348 188 VSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTE---LNFNMIGFMGAMISNLAFVFRNIFSKKG 264 (391)
Q Consensus 188 ~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~---~~~~~~G~~~~l~s~l~~a~~~v~~k~~ 264 (391)
++.+.++.++.|+++.+++++++|||++++++++++++++|+.++..++ .+.+..|++++++++++|+.++++.||.
T Consensus 86 a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal~~a~~~v~~~~~ 165 (299)
T PRK11453 86 AGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKI 165 (299)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998886542 2234579999999999999999999987
Q ss_pred CCCCC-CchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHH-HHHHHHHHHHHHhhccCh
Q 016348 265 MKGKS-VSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSI-FYHLYNQVSYMSLDEISP 342 (391)
Q Consensus 265 ~~~~~-~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~l~~~~~~~~l~~~s~ 342 (391)
.++.+ ...+....+...++...+.......|++......+..........+++..+..+. .+.+| ++.+++.+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~----~~~l~~~~a 241 (299)
T PRK11453 166 MSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIW----GTLLGRYET 241 (299)
T ss_pred hcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHH----HHHHHhCCH
Confidence 54332 2223333333333333333333334543211111111000001122333333333 33344 557899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 343 LTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 343 ~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
.+.+....++|+++.++|++++||+++..+++|+++++.|+++..+
T Consensus 242 ~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 242 WRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999988644
No 12
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.92 E-value=1.8e-22 Score=193.65 Aligned_cols=271 Identities=10% Similarity=-0.005 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH-HhccCCC---CCCCHHHHHHHHHHHHHHHH
Q 016348 99 KIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISW-ATRIAEP---PNTDLEFWKTLFPVAVAHTI 174 (391)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~-~~~~~~~---~~~~~~~~~~~l~~~~~~~~ 174 (391)
+..++.++....+.......|.. .++| |..+.+.|+..+.+.+...+ .++..+. ...+++++......++....
T Consensus 8 ~g~~~~l~a~~~wg~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (296)
T PRK15430 8 QGVLLALAAYFIWGIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGG 85 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 44445554445555566677886 6788 99999999998877544332 2221110 00123333333344555678
Q ss_pred HHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHHHHHHHHHHH
Q 016348 175 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAF 254 (391)
Q Consensus 175 ~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~~ 254 (391)
++.+.++|+++++++.+.++.++.|+++++++++++|||+++++|.+++++++|+.++..++.+.. .++++++++|
T Consensus 86 ~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~~~ 161 (296)
T PRK15430 86 NWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAFSF 161 (296)
T ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999999998764332222 4678899999
Q ss_pred HHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHH-HHHHHHHHHHHHHHH
Q 016348 255 VFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWW-VAAQSIFYHLYNQVS 333 (391)
Q Consensus 255 a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~l~~~~~ 333 (391)
++|.++.||..++...+......+...++.....+. .+.+.. .+...... ....+.. .+.+.+.+.+|
T Consensus 162 a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~-~~~~~~~~g~~t~i~~~~~---- 230 (296)
T PRK15430 162 AFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTS---HMGQNPMS-LNLLLIAAGIVTTVPLLCF---- 230 (296)
T ss_pred HHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcc---cccCCcHH-HHHHHHHHHHHHHHHHHHH----
Confidence 999999998643222211222222222222222111 111100 00000000 0111111 12222333333
Q ss_pred HHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 334 YMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 334 ~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
++.+++.+|.+.+...+++|++++++|++++||++++.+++|++++++|+.+.
T Consensus 231 ~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~ 283 (296)
T PRK15430 231 TAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF 283 (296)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 66789999999999999999999999999999999999999999998877654
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.92 E-value=3.1e-22 Score=191.75 Aligned_cols=267 Identities=15% Similarity=0.106 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 016348 99 KIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVA 178 (391)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 178 (391)
+...++++....+...+...|+.++++| |..+.+.|++.+.+++++....+.+ +.++++|+..+..|++......+
T Consensus 12 ~~~~~~~la~~~~~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~ 87 (293)
T PRK10532 12 LPILLLLIAMASIQSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWRL---RFAKEQRLPLLFYGVSLGGMNYL 87 (293)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHhc---cCCHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666677778999999999 8999999999988776554322221 22455677788888888777888
Q ss_pred hhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeec--c-ccchHHHHHHHHHHHHHHH
Q 016348 179 ATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVT--E-LNFNMIGFMGAMISNLAFV 255 (391)
Q Consensus 179 ~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~--~-~~~~~~G~~~~l~s~l~~a 255 (391)
.+++++|++++.+.++..+.|+++++++. |++.+ +.++.++++|+.++... + .+.+..|.+++++++++|+
T Consensus 88 ~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~~a 161 (293)
T PRK10532 88 FYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGACWA 161 (293)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHHHH
Confidence 89999999999999999999999998873 55544 44567788999877532 2 2345789999999999999
Q ss_pred HHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHH-HHHHHHHHHH
Q 016348 256 FRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSI-FYHLYNQVSY 334 (391)
Q Consensus 256 ~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~-~~~l~~~~~~ 334 (391)
+|.++.||..++++.... .+...++...+.|+....++...+ ++.. . ...++..+..++ .+.+| +
T Consensus 162 ~~~v~~r~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~--~~~~----~-~~~l~lgv~~t~~~~~l~----~ 227 (293)
T PRK10532 162 IYILSGQRAGAEHGPATV---AIGSLIAALIFVPIGALQAGEALW--HWSI----L-PLGLAVAILSTALPYSLE----M 227 (293)
T ss_pred HHHHHHHHHhccCCchHH---HHHHHHHHHHHHHHHHHccCcccC--CHHH----H-HHHHHHHHHHHHHHHHHH----H
Confidence 999999998655443222 233455666666766543321110 1110 0 112233333333 33344 5
Q ss_pred HHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhc
Q 016348 335 MSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQA 389 (391)
Q Consensus 335 ~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~ 389 (391)
+.+++.+|.+.++..+++|+++.++|++++||+++..+++|+++++.|++.+.+.
T Consensus 228 ~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 228 IALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999999999999999999988654
No 14
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.90 E-value=1.9e-21 Score=186.90 Aligned_cols=270 Identities=14% Similarity=0.214 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHh-cCCChHHHHHHHHHHHHHHHH-H-HHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 016348 111 NVVFNIYNKKVLN-AYPYPWLTSTLSLACGSLMML-I-SWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVA 187 (391)
Q Consensus 111 ~~~~~~~nK~~l~-~fp~P~~lt~~~~~~~~l~ll-~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s 187 (391)
+.+.+..+..+-+ ++..|.+.++...+.-.+... . .++++.++..+.-+++|++.+..|++...++.+.+.|++|++
T Consensus 25 ~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTs 104 (334)
T PF06027_consen 25 ITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTS 104 (334)
T ss_pred HHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3344445555554 467788888887665444322 1 222222222222233456677889999999999999999999
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc---------cchHHHHHHHHHHHHHHHHHH
Q 016348 188 VSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL---------NFNMIGFMGAMISNLAFVFRN 258 (391)
Q Consensus 188 ~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~---------~~~~~G~~~~l~s~l~~a~~~ 258 (391)
++.++++.++..+++++++++++|+|+++.+++|++++++|++++...|. +....|+++++.|++.||+++
T Consensus 105 vtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~n 184 (334)
T PF06027_consen 105 VTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSN 184 (334)
T ss_pred HhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998876542 124789999999999999999
Q ss_pred HHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhh
Q 016348 259 IFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLD 338 (391)
Q Consensus 259 v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~ 338 (391)
++.|+..++.+ ...+.+..++++.++..+.....|..++....|.. ......+..++.-+..+...-..++
T Consensus 185 V~~E~~v~~~~--~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~-------~~~~~~v~~~~~lf~~y~l~p~~l~ 255 (334)
T PF06027_consen 185 VLEEKLVKKAP--RVEFLGMLGLFGFIISGIQLAILERSGIESIHWTS-------QVIGLLVGYALCLFLFYSLVPIVLR 255 (334)
T ss_pred HHHHHhcccCC--HHHHHHHHHHHHHHHHHHHHHheehhhhhccCCCh-------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887654 56777888888888888877778876654333422 1111222222222222222234689
Q ss_pred ccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhc
Q 016348 339 EISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQA 389 (391)
Q Consensus 339 ~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~ 389 (391)
..||...++......+++++.++++||+++++..++|.+++++|+.+|+..
T Consensus 256 ~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 256 MSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred hCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 999999999999999999999999999999999999999999999999753
No 15
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.88 E-value=2.6e-20 Score=177.35 Aligned_cols=267 Identities=13% Similarity=0.111 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhc--cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 016348 106 TWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATR--IAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSM 183 (391)
Q Consensus 106 ~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al 183 (391)
+...+....+..+|...++-+ +. ...+.....+++......+ .++.+..+++.|...+..++....++.+.+.++
T Consensus 8 ~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 84 (281)
T TIGR03340 8 FSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAY 84 (281)
T ss_pred HHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455567788897777633 43 2444444444433322221 222333345555556666667788899999999
Q ss_pred cccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc-cchHHHHHHHHHHHHHHHHHHHHHh
Q 016348 184 SKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL-NFNMIGFMGAMISNLAFVFRNIFSK 262 (391)
Q Consensus 184 ~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~-~~~~~G~~~~l~s~l~~a~~~v~~k 262 (391)
++.+++.+..+.++.|+++++++++++|||+++++|+|+.++++|+.++..++. ..+..|+.++++++++|++|.++.|
T Consensus 85 ~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k 164 (281)
T TIGR03340 85 HHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDK 164 (281)
T ss_pred hcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999999999999999999999999988765432 3456788899999999999999998
Q ss_pred hcCCCCCC--chhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHH-HHHHHHHHHHHHHHHHHhhc
Q 016348 263 KGMKGKSV--SGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWV-AAQSIFYHLYNQVSYMSLDE 339 (391)
Q Consensus 263 ~~~~~~~~--~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~~~l~~~~~~~~l~~ 339 (391)
+..++.+. ....+...........+.+.....+........+ . .....+.. +.+.+.+.+| ++.+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~s~l~~~l~----~~al~~ 234 (281)
T TIGR03340 165 AAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYAR-----Q-ILPSATLGGLMIGGAYALV----LWAMTR 234 (281)
T ss_pred ccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHH-----H-HHHHHHHHHHHHHHHHHHH----HHHHhh
Confidence 76433221 1111222111111111111111111111000000 0 01112222 2222323333 567899
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016348 340 ISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFL 385 (391)
Q Consensus 340 ~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~l 385 (391)
.++.+.+...+++|+++.++|++++||+++..+++|++++++|+++
T Consensus 235 ~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 235 LPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred CCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999999875
No 16
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.85 E-value=4.7e-18 Score=161.07 Aligned_cols=276 Identities=16% Similarity=0.203 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 016348 101 GIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAAT 180 (391)
Q Consensus 101 ~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 180 (391)
..+..++...+.......|...++...+......|+..+.+.......++.....+..++.++..+..++....+..+.+
T Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (292)
T COG0697 9 LLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLF 88 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555666677777633255566668777776633332222111122222233445555666688889999
Q ss_pred hhhcccchHHHHHHHhhHHHHHHHHHH-HHhcccCChhhHHHHHhhhhhheeeeeccccch---HHHHHHHHHHHHHHHH
Q 016348 181 VSMSKVAVSFTHIIKSGEPAFSVLVSR-FLLGETFPLPVYMSLVPIIGGCALAAVTELNFN---MIGFMGAMISNLAFVF 256 (391)
Q Consensus 181 ~al~~~s~s~~~ii~~~~Pv~t~lls~-l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~---~~G~~~~l~s~l~~a~ 256 (391)
.++++++++.++++.++.|+++.+++. +++|||++++++.++++++.|+.++..++...+ ..|+.+++.+++++++
T Consensus 89 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~ 168 (292)
T COG0697 89 LALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWAL 168 (292)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997 777999999999999999999999988766543 5899999999999999
Q ss_pred HHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHH-HHHHHHHHHHHHHHHHH
Q 016348 257 RNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWW-VAAQSIFYHLYNQVSYM 335 (391)
Q Consensus 257 ~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~~~~l~~~~~~~ 335 (391)
+.++.|+.. +.+....... +..........+... .+.+ ....+.+. ....+. +...++.++++ ++
T Consensus 169 ~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~--~~~~~~~~-----~~~~~~g~~~~~i~~~~~----~~ 234 (292)
T COG0697 169 YTALVKRLS-RLGPVTLALL-LQLLLALLLLLLFFL-SGFG--APILSRAW-----LLLLYLGVFSTGLAYLLW----YY 234 (292)
T ss_pred HHHHHHHhc-CCChHHHHHH-HHHHHHHHHHHHHHh-cccc--ccCCHHHH-----HHHHHHHHHHHHHHHHHH----HH
Confidence 999999876 3222222221 222212222222221 1111 00011110 111111 22222233333 66
Q ss_pred HhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhcc
Q 016348 336 SLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 336 ~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
..++.++...+.....+|+++++.+++++||+++..+++|.++++.|+.+.++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~ 289 (292)
T COG0697 235 ALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRA 289 (292)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhccc
Confidence 7899999999999999999999999999999999999999999999999987654
No 17
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.83 E-value=6.1e-18 Score=158.81 Aligned_cols=244 Identities=9% Similarity=0.009 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH-HHhccCC-----CCCC-CHHHHHHHHHHHHHHHH
Q 016348 102 IYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLIS-WATRIAE-----PPNT-DLEFWKTLFPVAVAHTI 174 (391)
Q Consensus 102 ~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~-~~~~~~~-----~~~~-~~~~~~~~l~~~~~~~~ 174 (391)
++..+...++.......|. ..+.+ |..+.+.|++.+.+++++. ..++.++ .++. +++.+......+++...
T Consensus 5 ~~~i~a~~~wg~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 82 (256)
T TIGR00688 5 IVSLLASFLFGYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGF 82 (256)
T ss_pred HHHHHHHHHHHHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHH
Confidence 3444444555566678898 56788 9999999999887665432 2222111 1111 22224446677777888
Q ss_pred HHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHHHHHHHHHHH
Q 016348 175 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAF 254 (391)
Q Consensus 175 ~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~~ 254 (391)
+..+.++|+++++++.++++.++.|+++++++++++|||++++++++++++++|+.++..++.+.+ .++++++++|
T Consensus 83 ~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa~~~ 158 (256)
T TIGR00688 83 NWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLAFSF 158 (256)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999988754332222 3578899999
Q ss_pred HHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHH
Q 016348 255 VFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSY 334 (391)
Q Consensus 255 a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~ 334 (391)
+.|.+..||..++ +....... .........+.....+.+... .+. . .......+...+.+++.+.++ +
T Consensus 159 a~~~i~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~-~-~~~~~~l~~~g~~t~i~~~l~----~ 226 (256)
T TIGR00688 159 TAYGLIRKALKNT-DLAGFCLE---TLSLMPVAIYYLLQTDFATVQ--QTN-P-FPIWLLLVLAGLITGTPLLAF----V 226 (256)
T ss_pred HHHHHHHhhcCCC-CcchHHHH---HHHHHHHHHHHHHHhccCccc--ccC-c-hhHHHHHHHHHHHHHHHHHHH----H
Confidence 9999999987432 22111111 111111111111111111000 000 0 000011111222233333333 5
Q ss_pred HHhhccChhHHHHHHHHHHHHHHHHHHHH
Q 016348 335 MSLDEISPLTFSIGNTMKRISVIVSSIII 363 (391)
Q Consensus 335 ~~l~~~s~~t~si~~~l~pv~~ii~g~l~ 363 (391)
..+++.++.+.+...+++|+++.++|+++
T Consensus 227 ~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 227 IAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999999999999865
No 18
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.80 E-value=2.3e-20 Score=168.88 Aligned_cols=290 Identities=18% Similarity=0.241 Sum_probs=230.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCChHHHHHHHHHHHHHHHHH-HHHhc----cCCCC--CCCHHHHHHH
Q 016348 97 KVKIGIYFATWWALNVVFNIYNKKVLNA----YPYPWLTSTLSLACGSLMMLI-SWATR----IAEPP--NTDLEFWKTL 165 (391)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~nK~~l~~----fp~P~~lt~~~~~~~~l~ll~-~~~~~----~~~~~--~~~~~~~~~~ 165 (391)
..........+|.+++.+.+.||+++.. ...|.+.+..|.++...++.. .+... ....| +.+.+..+.+
T Consensus 26 ~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~v 105 (347)
T KOG1442|consen 26 AKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQV 105 (347)
T ss_pred hhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhh
Confidence 3345556677889999999999999985 567999999998877665443 33221 11222 2456667889
Q ss_pred HHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecc---ccchHH
Q 016348 166 FPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTE---LNFNMI 242 (391)
Q Consensus 166 l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~---~~~~~~ 242 (391)
+|+++.+..++.+.|..++|++++++++=+++.-+|+++++++++|+|-+.....+.++++.|-.+-+..| ...++.
T Consensus 106 lplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~ 185 (347)
T KOG1442|consen 106 LPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWI 185 (347)
T ss_pred cchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999998887776 456899
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHh-cchhhhHhhhhhhhhhhchHHHHHHHH
Q 016348 243 GFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAV-EGPQLWAAGYKTAMSQIGPQFIWWVAA 321 (391)
Q Consensus 243 G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~-e~~~~~~~~~~~~~~~~~~~~l~~l~~ 321 (391)
|.++.+.|.++-|+..++.||......-.-..+..+.+..++++.+|..... |-...+. +.+ .....++..+.+
T Consensus 186 GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~--~~~---l~a~~Fw~~mtL 260 (347)
T KOG1442|consen 186 GVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG--FPH---LPAIKFWILMTL 260 (347)
T ss_pred hhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC--ccc---chHHHHHHHHHH
Confidence 9999999999999999999986543221122334455777777778775532 2222221 110 001235556788
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhccC
Q 016348 322 QSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAKQ 391 (391)
Q Consensus 322 ~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k~ 391 (391)
++++++..|+...+-+|-+||+|+.+.+..|...-.+++..+++|.-+..-|-|-.+++.|...|.+.|+
T Consensus 261 sglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 261 SGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred HHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence 9999999998888889999999999999999999999999999999999999999999999999998763
No 19
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.79 E-value=9.8e-17 Score=147.89 Aligned_cols=288 Identities=15% Similarity=0.159 Sum_probs=220.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHh--------cCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 016348 95 AQKVKIGIYFATWWALNVVFNIYNKKVLN--------AYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLF 166 (391)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~nK~~l~--------~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l 166 (391)
.+.....+.+...|+..+...++.+.+.. .|.+|.++.++|-+.+.++-......+ ++..+ .++.|....
T Consensus 10 ~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~-k~~~~-~~apl~~y~ 87 (327)
T KOG1581|consen 10 NKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWW-KKELS-GVAPLYKYS 87 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcc-cccCC-CCCchhHHh
Confidence 34455555666667777777776666654 367899999999887777643322111 12222 333466788
Q ss_pred HHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc---------
Q 016348 167 PVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL--------- 237 (391)
Q Consensus 167 ~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~--------- 237 (391)
..++....+..+.+.|++|++-+...+-|++.-+-+++++.++.|+|++.++++...++..||.+....+.
T Consensus 88 ~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~ 167 (327)
T KOG1581|consen 88 LISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGR 167 (327)
T ss_pred HHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCC
Confidence 89999999999999999999999999999999999999999999999999999999999999988764321
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHH
Q 016348 238 NFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIW 317 (391)
Q Consensus 238 ~~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~ 317 (391)
....+|+.++..+.+..++.+-.++++.++..++....+.+.++++.+.-... +...+......++ ...++...+
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~-li~qg~~~~av~F----~~~hp~~~~ 242 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTY-LILQGHLLPAVSF----IKEHPDVAF 242 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHh-hhcCCCCchHHHH----HHcChhHHH
Confidence 24589999999999999999999999998888887777766677666554332 2222211111111 122455666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhc
Q 016348 318 WVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQA 389 (391)
Q Consensus 318 ~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~ 389 (391)
-++..+.++...+.+.|+.+++.+|++...++..+.+++++++.++||++++..|+.|..+++.|+++-...
T Consensus 243 Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~ 314 (327)
T KOG1581|consen 243 DILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILL 314 (327)
T ss_pred HHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHH
Confidence 666666666666677788999999999999999999999999999999999999999999999999875443
No 20
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.78 E-value=6e-18 Score=149.01 Aligned_cols=274 Identities=17% Similarity=0.212 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhh
Q 016348 105 ATWWALNVVFNIYNKKVLNA--YPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVS 182 (391)
Q Consensus 105 ~~~~~~~~~~~~~nK~~l~~--fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a 182 (391)
+.+.+.++.++..||++++. |+--+++.+.|-.+...-+.+....|..+. |..+.|.++|.+++.....+..-.+
T Consensus 12 lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~f---R~t~aK~WfpiSfLLv~MIyt~SKs 88 (309)
T COG5070 12 LSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEF---RLTKAKKWFPISFLLVVMIYTSSKS 88 (309)
T ss_pred HHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhe---ehhhhhhhcCHHHHHHHHHHhcccc
Confidence 34457788899999999984 655567777776655555555444443332 2344677899999998888888999
Q ss_pred hcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc--------cchHHHHHHHHHHHHHH
Q 016348 183 MSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL--------NFNMIGFMGAMISNLAF 254 (391)
Q Consensus 183 l~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~--------~~~~~G~~~~l~s~l~~ 254 (391)
++|.+++.+++.|.++.+.++..+.+++|.|++.....+.++.+..-+...++|. ..| .|++|+...+++.
T Consensus 89 LqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Nclss 167 (309)
T COG5070 89 LQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCLSS 167 (309)
T ss_pred eeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhHhH
Confidence 9999999999999999999999999999999999999999999999999988886 344 5999999999999
Q ss_pred HHHHHHHhhcCCC---CCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHH
Q 016348 255 VFRNIFSKKGMKG---KSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQ 331 (391)
Q Consensus 255 a~~~v~~k~~~~~---~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~ 331 (391)
+.+-+..||..+- ++.+.+.+ -+.+++.+++.+.+..|....- ... .......+.+.+.++++.+...+
T Consensus 168 aafVL~mrkri~ltNf~d~dtmfY---nNllslPiL~~~s~~~edws~~--n~a---nnl~~d~l~am~ISgl~svgiSy 239 (309)
T COG5070 168 AAFVLIMRKRIKLTNFKDFDTMFY---NNLLSLPILLSFSFLFEDWSPG--NLA---NNLSVDSLMAMFISGLCSVGISY 239 (309)
T ss_pred HHHHHHHHHhhcccccchhhHHHH---hhhHHHHHHHHHHHHhccCCcc--hhh---cCCChHHHHHHHHHHHHHhhhhh
Confidence 9998888775442 23333333 3677888888777776643211 111 11112234567788888888888
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhcc
Q 016348 332 VSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 332 ~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
..-|+++.+|..++|..+.+++.-..+.|.++|||+.+...+..+.+-+....+|...|
T Consensus 240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavak 298 (309)
T COG5070 240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAK 298 (309)
T ss_pred ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999888888887654
No 21
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.75 E-value=1.3e-16 Score=145.09 Aligned_cols=279 Identities=16% Similarity=0.208 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHh-------cCCChHHHHHHHHHHHHHHHHHHHHhcc----CCCC----------CCCHHHHHHHHHH
Q 016348 110 LNVVFNIYNKKVLN-------AYPYPWLTSTLSLACGSLMMLISWATRI----AEPP----------NTDLEFWKTLFPV 168 (391)
Q Consensus 110 ~~~~~~~~nK~~l~-------~fp~P~~lt~~~~~~~~l~ll~~~~~~~----~~~~----------~~~~~~~~~~l~~ 168 (391)
....+++..||.=+ .|.+|++.+...|+--.+++.+....+. +... +...+ -+..++.
T Consensus 14 sGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~-p~lfl~P 92 (372)
T KOG3912|consen 14 SGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN-PVLFLPP 92 (372)
T ss_pred hccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC-cceecCh
Confidence 34455567788755 2778999998888776665543322111 1000 00111 1456788
Q ss_pred HHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc----------c
Q 016348 169 AVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL----------N 238 (391)
Q Consensus 169 ~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~----------~ 238 (391)
+++...+..+.|.++.+++++.+||++....+|+.+++.-+++++++.++|++++....|++++...|. +
T Consensus 93 al~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s 172 (372)
T KOG3912|consen 93 ALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYS 172 (372)
T ss_pred HHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999876542 2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHH----HHHHHHhcchhh------hHhhhhhhh
Q 016348 239 FNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLIL----TPFAIAVEGPQL------WAAGYKTAM 308 (391)
Q Consensus 239 ~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l----~p~~~~~e~~~~------~~~~~~~~~ 308 (391)
.-..|+++++++-+.-|.+.++.+|..++++++++...++.+.++++++ +|+..+..++.+ .-++|.+..
T Consensus 173 ~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~ 252 (372)
T KOG3912|consen 173 SIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAF 252 (372)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHH
Confidence 2367999999999999999999999889999999999888888886554 333322222111 012344433
Q ss_pred hhhc--hHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 309 SQIG--PQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 309 ~~~~--~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
...+ +.+...+....+.-.++|+......|..|+.+..+...++..+.+++++....|.+...|+.|.++.+.|+++|
T Consensus 253 ~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY 332 (372)
T KOG3912|consen 253 AALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY 332 (372)
T ss_pred HHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222 33333333333333457888888899999999999999999999999999999999999999999999999999
Q ss_pred hhc
Q 016348 387 SQA 389 (391)
Q Consensus 387 ~~~ 389 (391)
+..
T Consensus 333 ~~i 335 (372)
T KOG3912|consen 333 NQI 335 (372)
T ss_pred HHH
Confidence 863
No 22
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.73 E-value=1.3e-16 Score=137.72 Aligned_cols=146 Identities=35% Similarity=0.561 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC-----CCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhh--hchHH
Q 016348 243 GFMGAMISNLAFVFRNIFSKKGMKG-----KSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQ--IGPQF 315 (391)
Q Consensus 243 G~~~~l~s~l~~a~~~v~~k~~~~~-----~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~--~~~~~ 315 (391)
|++++++|+++.++|+++.|+.+++ +..++.+...+.+..+.+++.|.+...|+++............ .....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7899999999999999999998877 5788888888889999999999998888876443221111000 02346
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 316 IWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 316 l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
+..++.+++.++++|...+.+++++||+++++.+.+|++..++.|+++|||+++..+++|+++.+.|+++|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6677889999999999999999999999999999999999999999999999999999999999999999986
No 23
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.71 E-value=8e-17 Score=143.05 Aligned_cols=254 Identities=17% Similarity=0.208 Sum_probs=184.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHH
Q 016348 125 YPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVL 204 (391)
Q Consensus 125 fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~l 204 (391)
|.|...+.+.|..+..+..-+....+.+ .+.++..-+.....++.+.+.++.+|.+++|+|.+...+-|++.|+-+++
T Consensus 50 FTfalaLVf~qC~~N~vfAkvl~~ir~~--~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi 127 (337)
T KOG1580|consen 50 FTFALALVFFQCTANTVFAKVLFLIRKK--TEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI 127 (337)
T ss_pred ehHHHHHHHHHHHHHHHHHHhheeeccc--ccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence 5566667777777776654332222211 11222223567788889999999999999999999999999999999999
Q ss_pred HHHHHhcccCChhhHHHHHhhhhhheeeeeccc-------cchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHH
Q 016348 205 VSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL-------NFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYA 277 (391)
Q Consensus 205 ls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~-------~~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~ 277 (391)
++.++.+++++|++++.++++++||++.-..+. .....|-++.++|....++....++|.-+.+...+...+.
T Consensus 128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~ 207 (337)
T KOG1580|consen 128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMF 207 (337)
T ss_pred eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHH
Confidence 999999999999999999999999999865432 2234788999999999988888887764333323322222
Q ss_pred HHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHH
Q 016348 278 CLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVI 357 (391)
Q Consensus 278 ~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~i 357 (391)
+.++.+.+.+.. .+.+.|. .|+.-. .....|..+|-+..-++...+.+...|..+...+|++-|+....+..+++
T Consensus 208 ~~NlwStL~Lg~-g~lfTGE-lweF~y---F~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTi 282 (337)
T KOG1580|consen 208 YTNLWSTLYLGA-GLLFTGE-LWEFFY---FVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTI 282 (337)
T ss_pred HHHHHHHHHhhh-hheehhh-HHHHHH---HHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHH
Confidence 335555554432 2222332 222100 01123455555555566666667777889999999999999999999999
Q ss_pred HHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016348 358 VSSIIIFHTPVQPINALGAAIAILGTFL 385 (391)
Q Consensus 358 i~g~l~fge~~t~~~~iG~~li~~Gv~l 385 (391)
+.|+++|+++++..||+|..+++.|+..
T Consensus 283 l~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 283 LISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999865
No 24
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.70 E-value=2.2e-14 Score=137.15 Aligned_cols=252 Identities=18% Similarity=0.171 Sum_probs=171.1
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHH
Q 016348 113 VFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLI-SWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFT 191 (391)
Q Consensus 113 ~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~ 191 (391)
.+....|.+. +.+.++.. +...+.+++.. ....+.++ +.+++.+..-+..|+....++.+++.+.++++++.+
T Consensus 15 s~g~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a 88 (290)
T TIGR00776 15 SFVLINVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKT 88 (290)
T ss_pred hhHHHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHH
Confidence 3444557665 55544443 45555554332 22222211 122444555566677788999999999999999999
Q ss_pred HHHHh-hHHHHHHHHHHHHhcccCChhh----HHHHHhhhhhheeeeecccc-------ch-HHHHHHHHHHHHHHHHHH
Q 016348 192 HIIKS-GEPAFSVLVSRFLLGETFPLPV----YMSLVPIIGGCALAAVTELN-------FN-MIGFMGAMISNLAFVFRN 258 (391)
Q Consensus 192 ~ii~~-~~Pv~t~lls~l~l~e~~~~~~----~~~lll~~~Gv~l~~~~~~~-------~~-~~G~~~~l~s~l~~a~~~ 258 (391)
..+-+ +.+++..+++.+++||+.++++ +++++++++|+.+....+.+ .+ ..|++++++|+++|++|.
T Consensus 89 ~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~ 168 (290)
T TIGR00776 89 MPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYV 168 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 99988 8888999999999999999999 99999999999998654221 33 689999999999999999
Q ss_pred HHHhhcCCCCCCchhHh---HHHHHHHHHH-HHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHH
Q 016348 259 IFSKKGMKGKSVSGMNY---YACLSILSLL-ILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSY 334 (391)
Q Consensus 259 v~~k~~~~~~~~~~l~~---~~~~~~i~~~-~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~ 334 (391)
+..|+.. .++... ..+...++.. +..+. . .+.+ +.. ...+.....+++...-+...+
T Consensus 169 ~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~~------~~~-------~~~~~~~~~Gi~~~ia~~~y~ 229 (290)
T TIGR00776 169 VVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGH-I-LAKP------LKK-------YAILLNILPGLMWGIGNFFYL 229 (290)
T ss_pred HHHHHcC----CCcceehhHHHHHHHHHHHHHHHHH-h-cccc------hHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 9999762 233333 2221222222 22222 0 0111 110 011111113333222233334
Q ss_pred HHhh-ccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhh----HhHHHHHHHHHHHhhc
Q 016348 335 MSLD-EISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINA----LGAAIAILGTFLYSQA 389 (391)
Q Consensus 335 ~~l~-~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~----iG~~li~~Gv~ly~~~ 389 (391)
...+ +.++.+.++...++|+.+.+.+++++||+.++.|+ +|.++++.|+.+-...
T Consensus 230 ~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~ 289 (290)
T TIGR00776 230 FSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIG 289 (290)
T ss_pred HHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhcc
Confidence 5677 99999999999999999999999999999999999 9999999999886544
No 25
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.69 E-value=2.8e-14 Score=128.48 Aligned_cols=242 Identities=16% Similarity=0.187 Sum_probs=182.0
Q ss_pred HHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHh
Q 016348 117 YNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKS 196 (391)
Q Consensus 117 ~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~ 196 (391)
+.|.++..++ |.-++.+|...+.++++..++-.+ .+.++++|+.++..|+.....+.++|.+++.+|.+.+..+-+
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~RPwr---~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF 105 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALFRPWR---RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF 105 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHhhHHH---hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 5588888888 899999999999988766544322 234567789999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeee--e-ccccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchh
Q 016348 197 GEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA--V-TELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGM 273 (391)
Q Consensus 197 ~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~--~-~~~~~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l 273 (391)
+-|+.+++++ .+|..-..|+++ .+.|..+.. . +..+.|..|..+++.+..||+.|.+..||.-+. .+..
T Consensus 106 ~GPL~vA~~~----sRr~~d~vwvaL--AvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g~ 177 (292)
T COG5006 106 TGPLAVALLS----SRRLRDFVWVAL--AVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA--EHGT 177 (292)
T ss_pred ccHHHHHHHh----ccchhhHHHHHH--HHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCCc
Confidence 9999877654 455555556555 455655443 2 224668999999999999999999999987532 2233
Q ss_pred HhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHH----HHHHHHHHHHHHHHHHHHhhccChhHHHHHH
Q 016348 274 NYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWW----VAAQSIFYHLYNQVSYMSLDEISPLTFSIGN 349 (391)
Q Consensus 274 ~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~----l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~ 349 (391)
.-.+.-+.++.++..|+.....++.++. +.++.. .++++..-|.. .+..+++.++-++++..
T Consensus 178 ~g~a~gm~vAaviv~Pig~~~ag~~l~~-----------p~ll~laLgvavlSSalPYsL---EmiAL~rlp~~~F~~Ll 243 (292)
T COG5006 178 AGVAVGMLVAALIVLPIGAAQAGPALFS-----------PSLLPLALGVAVLSSALPYSL---EMIALRRLPARTFGTLL 243 (292)
T ss_pred hHHHHHHHHHHHHHhhhhhhhcchhhcC-----------hHHHHHHHHHHHHhcccchHH---HHHHHhhCChhHHHHHH
Confidence 3344446778888889877555554321 122222 22333333322 34569999999999999
Q ss_pred HHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHH
Q 016348 350 TMKRISVIVSSIIIFHTPVQPINALGAAIAILGTF 384 (391)
Q Consensus 350 ~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ 384 (391)
.++|.++.+.|++++||.+|..|++|++.++.+..
T Consensus 244 SLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 244 SLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999988765
No 26
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.68 E-value=3e-15 Score=141.60 Aligned_cols=221 Identities=14% Similarity=0.229 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc-----
Q 016348 163 KTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL----- 237 (391)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~----- 237 (391)
+..+....+....++.+|.|+.|++++..+++.++.-+||..++.++.+||+++.|.+++.+.++|++++..+|.
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~ 239 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSD 239 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEecccccccc
Confidence 444555666678888999999999999999999999999999999999999999999999999999999987743
Q ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHhhcCCCC--CCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhh-hh
Q 016348 238 ---NFNMIGFMGAMISNLAFVFRNIFSKKGMKGK--SVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMS-QI 311 (391)
Q Consensus 238 ---~~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~--~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~-~~ 311 (391)
+....|.+++++|++.||.|.++.||...++ .++.-.++++.+++.++++.|..+..+.-. .+.+.-+.. ..
T Consensus 240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~--~e~F~lP~~~q~ 317 (416)
T KOG2765|consen 240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFG--EERFELPSSTQF 317 (416)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhc--cCcccCCCCcee
Confidence 2347899999999999999999999865443 566677788889999999988776544221 011111100 01
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhc
Q 016348 312 GPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQA 389 (391)
Q Consensus 312 ~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~ 389 (391)
+..++..++.+.+.-|+| .+..-.++|++.++...+.-..+++...++-|.++++.+++|.+.+++|.+..|+.
T Consensus 318 ~~vv~~~ligtvvSDylW----~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~ 391 (416)
T KOG2765|consen 318 SLVVFNNLIGTVVSDYLW----AKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNIS 391 (416)
T ss_pred EeeeHhhHHHHHHHHHHH----HHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecc
Confidence 111222233444445555 45567889999999888888999999999999999999999999999999987764
No 27
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.68 E-value=5.2e-15 Score=137.53 Aligned_cols=211 Identities=17% Similarity=0.175 Sum_probs=156.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecccc--
Q 016348 161 FWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELN-- 238 (391)
Q Consensus 161 ~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~-- 238 (391)
+..++...+++|++.+.+.+.++++++++.+++++++..++|++++++++|+|++++||.++++.++|+.+...++..
T Consensus 16 ~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~ 95 (244)
T PF04142_consen 16 DTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSS 95 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccc
Confidence 345677888899999999999999999999999999999999999999999999999999999999999998533211
Q ss_pred ---------------chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhh
Q 016348 239 ---------------FNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAG 303 (391)
Q Consensus 239 ---------------~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~ 303 (391)
....|++++++++++.++..++.+|.+|+++.+-..........+.++........|+....+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g 175 (244)
T PF04142_consen 96 DNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISESG 175 (244)
T ss_pred ccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccCC
Confidence 13589999999999999999999999987653322222222444444444333333433222222
Q ss_pred hhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHH
Q 016348 304 YKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAI 378 (391)
Q Consensus 304 ~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~l 378 (391)
+.+ ..+...+..+...++.+.+.. ..+|+.+...-+....+.-+.+.+.++++||.+++....+|..+
T Consensus 176 ~f~---G~~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 176 FFH---GYSWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred chh---hcchHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 211 111222223344555554442 35799999999999999999999999999999999999999875
No 28
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.66 E-value=6.4e-15 Score=133.56 Aligned_cols=287 Identities=17% Similarity=0.171 Sum_probs=210.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHh--cC-CChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 016348 96 QKVKIGIYFATWWALNVVFNIYNKKVLN--AY-PYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAH 172 (391)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~nK~~l~--~f-p~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (391)
++....+.+...+.+-.++....+++++ .| |+.|.+++.|++.-..+.++-. .... ++.+...||-...++.+.
T Consensus 40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~-~~~~--~k~r~iP~rtY~~la~~t 116 (367)
T KOG1582|consen 40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL-QLIQ--TKRRVIPWRTYVILAFLT 116 (367)
T ss_pred hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE-Eeec--ccceecchhHhhhhHhhh
Confidence 3444555666666777778888888887 35 4889999999987655433311 1111 111233477788888888
Q ss_pred HHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecc----ccchHHHHHHHH
Q 016348 173 TIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTE----LNFNMIGFMGAM 248 (391)
Q Consensus 173 ~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~----~~~~~~G~~~~l 248 (391)
...+.++|-|+.|++-+...+.|++.-+-+++.+.++-|+|+++..+.+..+...|.++....| .++|..|++++-
T Consensus 117 ~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIs 196 (367)
T KOG1582|consen 117 VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMIS 196 (367)
T ss_pred hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHH
Confidence 8889999999999999999999999999999999999999999999999999999999987665 467899999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHH-HHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHH
Q 016348 249 ISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLIL-TPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYH 327 (391)
Q Consensus 249 ~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l-~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ 327 (391)
++.++.|+-.=+++|.++.++-+.+....|...++.+.+ .|..+-.|--.. |..... .........++-++.+|
T Consensus 197 gALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a----~~fcae-hp~~tyGy~~~~s~~gy 271 (367)
T KOG1582|consen 197 GALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSA----WTFCAE-HPVRTYGYAFLFSLAGY 271 (367)
T ss_pred HHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhh----hHHHHh-CcHhHHHHHHHHHHHhH
Confidence 999999988888888877655444333222334555443 444333332222 221111 01112222333445555
Q ss_pred HHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhcc
Q 016348 328 LYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 328 l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
+...+....++..++.++..+.+.++.+++++|+++|..|+|.+..-|..+++.|+++--+.|
T Consensus 272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 555555667999999999999999999999999999999999999999999999999865443
No 29
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.62 E-value=1.7e-15 Score=137.72 Aligned_cols=271 Identities=19% Similarity=0.265 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 016348 106 TWWALNVVFNIYNKKVLNAYPY-PWLTSTLSLACGSLMMLISWATRIAE-PPNTDLEFWKTLFPVAVAHTIGHVAATVSM 183 (391)
Q Consensus 106 ~~~~~~~~~~~~nK~~l~~fp~-P~~lt~~~~~~~~l~ll~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~al 183 (391)
+.++.++++.+.-+.+.++.|- .-++|+.|++.-+.--++.. .+... +|+... |.++..-..+...++++|+++
T Consensus 10 ~vf~GCcsnvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~-skf~~~k~kipl---k~Y~i~V~mFF~vnv~NN~al 85 (330)
T KOG1583|consen 10 LVFGGCCSNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFT-SKFFTVKPKIPL---KDYAITVAMFFIVNVTNNYAL 85 (330)
T ss_pred HHHHhhhchHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeee-ccccccCCCCch---hhhheehheeeeeeeecccee
Confidence 3344455556677888887773 34788999887666544332 22211 133333 344455555666778899999
Q ss_pred cc-cchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeec---ccc--------------c--hHHH
Q 016348 184 SK-VAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVT---ELN--------------F--NMIG 243 (391)
Q Consensus 184 ~~-~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~---~~~--------------~--~~~G 243 (391)
++ ++.+...+.++..++.++++++++.|+|++.+|+.+++++.+|+++.... |.. . -.+|
T Consensus 86 ~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iG 165 (330)
T KOG1583|consen 86 KFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIG 165 (330)
T ss_pred eecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHH
Confidence 99 79999999999999999999999999999999999999999999988532 211 1 1468
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC--CCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhh----------hhh
Q 016348 244 FMGAMISNLAFVFRNIFSKKGMK--GKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAM----------SQI 311 (391)
Q Consensus 244 ~~~~l~s~l~~a~~~v~~k~~~~--~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~----------~~~ 311 (391)
+.+..++.+..|...++++...+ +++..+..+|. ... -+|+.++..++-. . .|.... ...
T Consensus 166 i~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFyt--H~L----sLP~Flf~~~div-~-~~~~~~~se~~~~p~~g~~ 237 (330)
T KOG1583|consen 166 IALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYT--HFL----SLPLFLFMGDDIV-S-HWRLAFKSESYLIPLLGFK 237 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHH--HHh----ccchHHHhcchHH-H-HHHHHhcCcceeccccCcc
Confidence 88888888888887777665433 33445555553 333 3455444433321 1 122111 111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 312 GPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 312 ~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
-|..++.++++++..|.+.-..+....+++++|.++.-++++.+..++|++.|.+++++..++|.++++.|.++|+.
T Consensus 238 vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 238 VPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 25567788899999998877778889999999999999999999999999999999999999999999999999864
No 30
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.60 E-value=2.3e-16 Score=142.67 Aligned_cols=260 Identities=15% Similarity=0.140 Sum_probs=174.8
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 016348 108 WALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAE--PPNTDLEFWKTLFPVAVAHTIGHVAATVSMSK 185 (391)
Q Consensus 108 ~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~ 185 (391)
|.+|..+.+..|.+.++ |..+.-.|++.-.+....+....+.. -|. .++ +++++.|+....+....++|++|
T Consensus 47 ~ff~~~~vv~t~~~e~~---p~e~a~~r~l~~mlit~pcliy~~~~v~gp~-g~R--~~LiLRg~mG~tgvmlmyya~~~ 120 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVLEND---PMELASFRLLVRMLITYPCLIYYMQPVIGPE-GKR--KWLILRGFMGFTGVMLMYYALMY 120 (346)
T ss_pred HHHhhHHHhhhhhhccC---hhHhhhhhhhhehhhhheEEEEEeeeeecCC-CcE--EEEEeehhhhhhHHHHHHHHHhh
Confidence 67777777777766554 77777777555544433221111111 122 122 44778899999999999999999
Q ss_pred cchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc--------------cchHHHHHHHHHHH
Q 016348 186 VAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL--------------NFNMIGFMGAMISN 251 (391)
Q Consensus 186 ~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~--------------~~~~~G~~~~l~s~ 251 (391)
++.+.+.+|..++|+||.++++.++||++++...++.++.+.||+++..+.. +.+..|...++.+.
T Consensus 121 mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~ 200 (346)
T KOG4510|consen 121 MSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSV 200 (346)
T ss_pred cchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhH
Confidence 9999999999999999999999999999999999999999999999975521 23456888888888
Q ss_pred HHHHHHHHHHhhcCCCCC-CchhHhHHHHHHHHHHHHHH-HHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHH
Q 016348 252 LAFVFRNIFSKKGMKGKS-VSGMNYYACLSILSLLILTP-FAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLY 329 (391)
Q Consensus 252 l~~a~~~v~~k~~~~~~~-~~~l~~~~~~~~i~~~~l~p-~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~ 329 (391)
+.-|.-.++.|+.-|+.+ .-.+.++ +.+..+.... ...+.+. -+.+.+.+. ++++.-|++++..
T Consensus 201 lf~asvyIilR~iGk~~h~~msvsyf---~~i~lV~s~I~~~~ig~~--~lP~cgkdr---------~l~~~lGvfgfig 266 (346)
T KOG4510|consen 201 LFGASVYIILRYIGKNAHAIMSVSYF---SLITLVVSLIGCASIGAV--QLPHCGKDR---------WLFVNLGVFGFIG 266 (346)
T ss_pred hhhhhHHHHHHHhhccccEEEEehHH---HHHHHHHHHHHHhhccce--ecCccccce---------EEEEEehhhhhHH
Confidence 888877777877644322 2223333 3333222111 1111110 011122221 1222335555555
Q ss_pred HHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHh
Q 016348 330 NQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYS 387 (391)
Q Consensus 330 ~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~ 387 (391)
+...-+.+++--+-..++..+..-+++.+.-+++|||.++++.++|+++++....+..
T Consensus 267 QIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a 324 (346)
T KOG4510|consen 267 QILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVA 324 (346)
T ss_pred HHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHH
Confidence 5544455555555556788888899999999999999999999999999888776643
No 31
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.55 E-value=5.6e-12 Score=119.63 Aligned_cols=220 Identities=17% Similarity=0.168 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecc------
Q 016348 163 KTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTE------ 236 (391)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~------ 236 (391)
.++...+++|++.+.+.+.++.+.+++++++..++..+.|++++.++++||.+++||.++++.++|+.++-.+.
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 45667778888888899999999999999999999999999999999999999999999999999999985221
Q ss_pred -----ccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhh
Q 016348 237 -----LNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQI 311 (391)
Q Consensus 237 -----~~~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~ 311 (391)
.+..+.|+..++.+++.-++-+++.+|.+|+.+.+...-.--+..++.++........|+.... |.......
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~---~~gff~G~ 249 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN---EYGFFYGY 249 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc---cCCccccc
Confidence 1234789999999999999999999999987653322111111223333322222223433221 22112222
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhc
Q 016348 312 GPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQA 389 (391)
Q Consensus 312 ~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~ 389 (391)
+...+..++.+++.+.+..+ +.|+.+-..-.....+--+.+.+.|+.+||-++|....+|+.+++..+.+|+..
T Consensus 250 s~~vw~vVl~~a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~ 323 (345)
T KOG2234|consen 250 SSIVWLVVLLNAVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLY 323 (345)
T ss_pred cHHHHHHHHHHhccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcC
Confidence 22223334445555544433 356666666666666667888889999999999999999999999999999854
No 32
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.50 E-value=5.4e-11 Score=110.09 Aligned_cols=274 Identities=13% Similarity=0.075 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH--HHHhccCCCC--CCCHHHHHHHHHHHHHHH
Q 016348 98 VKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLI--SWATRIAEPP--NTDLEFWKTLFPVAVAHT 173 (391)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~--~~~~~~~~~~--~~~~~~~~~~l~~~~~~~ 173 (391)
.++.++.+..|.++...-++.|.+ +..| +.-+...|.+-+...+++ ...++.++.. ..+.+.+......+++..
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~ 83 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIG 83 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 346666777777777777777766 4455 666777777666554332 2222221111 111122344445555556
Q ss_pred HHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccchHHHHHHHHHHHHH
Q 016348 174 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNFNMIGFMGAMISNLA 253 (391)
Q Consensus 174 ~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~~~~G~~~~l~s~l~ 253 (391)
.+-..+.+|...-.+=.+++=-...|++.++++.+++|||+++.||+++.++.+||..-.....++++..+.+ +++
T Consensus 84 ~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a~s 159 (293)
T COG2962 84 LNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----ALS 159 (293)
T ss_pred HHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----HHH
Confidence 6777788899888777888888899999999999999999999999999999999999888777888766444 578
Q ss_pred HHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 016348 254 FVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVS 333 (391)
Q Consensus 254 ~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~ 333 (391)
|++|..+-|+. + ++...-+....+.-.+..+...++.+... ++ ..........++++.|.....--..-
T Consensus 160 f~~Ygl~RK~~-~---v~a~~g~~lE~l~l~p~al~yl~~l~~~~----~~---~~~~~~~~~~LLv~aG~vTavpL~lf 228 (293)
T COG2962 160 FGLYGLLRKKL-K---VDALTGLTLETLLLLPVALIYLLFLADSG----QF---LQQNANSLWLLLVLAGLVTAVPLLLF 228 (293)
T ss_pred HHHHHHHHHhc-C---CchHHhHHHHHHHHhHHHHHHHHHHhcCc----hh---hhcCCchHHHHHHHhhHHHHHHHHHH
Confidence 89998877764 2 33333333222221121111222222211 00 00001122233333443322211111
Q ss_pred HHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 334 YMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 334 ~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
-...++++=.+.++..+++|....+++++++||+++..+.+..+.+-.|+.+|..
T Consensus 229 ~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~ 283 (293)
T COG2962 229 AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSI 283 (293)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2246899999999999999999999999999999999999999999999999864
No 33
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.20 E-value=9.9e-11 Score=96.65 Aligned_cols=119 Identities=15% Similarity=0.293 Sum_probs=96.3
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH-HHHHHHHhhhhhcccchHHH
Q 016348 113 VFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVA-HTIGHVAATVSMSKVAVSFT 191 (391)
Q Consensus 113 ~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~al~~~s~s~~ 191 (391)
...+.+|...++++ |....+.|+..+.++.......+..+.+..+.+++...+..+++ ...+..+.+.++++.+++.+
T Consensus 5 ~~~~~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 83 (126)
T PF00892_consen 5 IYSVFSKKLLKKIS-PLSITFWRFLIAGILLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASIV 83 (126)
T ss_pred eHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhHH
Confidence 45678899999988 88899999888876222222222222233445556777777777 48889999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 192 HIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 192 ~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
+++..++|+++++++++++||+++++++.|++++++|+.++
T Consensus 84 ~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 84 SILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999875
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.18 E-value=1.7e-10 Score=105.96 Aligned_cols=191 Identities=18% Similarity=0.202 Sum_probs=125.6
Q ss_pred cchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc---------------------------c
Q 016348 186 VAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL---------------------------N 238 (391)
Q Consensus 186 ~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~---------------------------~ 238 (391)
++++.....++..++++++.+..+.+||++..++++.++...|+.....+|. .
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 5677888889999999999999999999999999999998888875322110 1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHH--HHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHH
Q 016348 239 FNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYAC--LSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFI 316 (391)
Q Consensus 239 ~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~--~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l 316 (391)
....|....+.+.++.++..++.++..|+++. +.+... ....+.+.........++......++ ... .+...
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~ 155 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDT--MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF---FIG-YPTAV 155 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCC--chHHHHHHHHHHHHHHHHHHHhhcccchhhccCc---ccC-CchHH
Confidence 23567778888888888999999988765432 111111 11111111111111111111100010 000 11222
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 317 WWV-AAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 317 ~~l-~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
+.+ +.+.+.+.+ ..+++++.++.+.+....++++.+.++|+++|||+++..++.|+.+++.|+++|
T Consensus 156 ~~~~~~~a~~~~~----v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 156 WIVGLLNVGGGLC----IGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHHHHhcCce----eeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 322 223332232 356789999999999999999999999999999999999999999999998876
No 35
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.16 E-value=1.3e-11 Score=111.44 Aligned_cols=260 Identities=13% Similarity=0.132 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHH
Q 016348 112 VVFNIYNKKVLNA-YPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSF 190 (391)
Q Consensus 112 ~~~~~~nK~~l~~-fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~ 190 (391)
...++.+.++-+. .+.|...+++....-++..-.....+. +.-+..|+..+++++...-++++-..|.+|++.-.
T Consensus 31 t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtS 106 (336)
T KOG2766|consen 31 TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTS 106 (336)
T ss_pred HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHH
Confidence 3445666666664 677888888876654444221111111 11233467788888888878877788999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc--------cchHHHHHHHHHHHHHHHHHHHHHh
Q 016348 191 THIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL--------NFNMIGFMGAMISNLAFVFRNIFSK 262 (391)
Q Consensus 191 ~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~--------~~~~~G~~~~l~s~l~~a~~~v~~k 262 (391)
.+.+.+-..+.+++++++++|.|..+.++.|++++++||.++...|. +....|+.++++++-+||..|+..+
T Consensus 107 i~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EE 186 (336)
T KOG2766|consen 107 IMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEE 186 (336)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHH
Confidence 99999999999999999999999999999999999999999876652 2346899999999999999999888
Q ss_pred hcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccCh
Q 016348 263 KGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISP 342 (391)
Q Consensus 263 ~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~ 342 (391)
.+.|+ .+...+.+..++++.++...- ++.|..+.....|.... ..+....- ....+|.+. =..+|..|+
T Consensus 187 flvkn--~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~i------~~yl~f~L-~MFllYsl~-pil~k~~~a 255 (336)
T KOG2766|consen 187 FLVKN--ADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSAI------FLYLRFAL-TMFLLYSLA-PILIKTNSA 255 (336)
T ss_pred HHHhc--CcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHHH------HHHHHHHH-HHHHHHHhh-HHheecCCc
Confidence 77655 456667776777777766555 44555443333342111 11111111 112233322 234788999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 343 LTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 343 ~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
..+.+.......+++++ ..||-+.++...+..+.+..|.++|+-
T Consensus 256 T~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 256 TMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred eEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 99999888899999988 889999999999999999999999964
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.98 E-value=6.9e-09 Score=84.44 Aligned_cols=121 Identities=21% Similarity=0.267 Sum_probs=98.8
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHhccCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHH
Q 016348 113 VFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLI-SWATRIAEPP-NTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSF 190 (391)
Q Consensus 113 ~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~-~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~ 190 (391)
...++.|..+++.+ |.+-++.|-++....+.. ....+....+ ..+.+.|..+..-|+....+-.+++.+++...+|.
T Consensus 17 L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~ 95 (140)
T COG2510 17 LTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASR 95 (140)
T ss_pred HHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcce
Confidence 34467799999988 888999997776665443 3333332222 13455678888888888999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 191 THIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 191 ~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
..-+..+.|+++++++++++|||++.++|+|++++++|+.++..
T Consensus 96 VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 96 VVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred EEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999998753
No 37
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.92 E-value=4e-09 Score=86.46 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHH-HHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccc
Q 016348 162 WKTLFPVAVAHT-IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNF 239 (391)
Q Consensus 162 ~~~~l~~~~~~~-~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~ 239 (391)
+......+++.. .+..+.++|+++.+ +.+..+.++.|+++++++++++|||++++++.+++++++|++++..+|.+.
T Consensus 34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~~ 111 (113)
T PF13536_consen 34 WLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLTG 111 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhccc
Confidence 455666677664 88889999999999 689999999999999999999999999999999999999999998777553
No 38
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.76 E-value=4.9e-08 Score=80.38 Aligned_cols=125 Identities=16% Similarity=0.201 Sum_probs=83.7
Q ss_pred HHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHHHHHHHHHH
Q 016348 252 LAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQSIFYHLYNQ 331 (391)
Q Consensus 252 l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~ 331 (391)
++|+.+.++.|+..++ .++.....+...++.+ +.+.....+..+....+.. .....+....+.....+.
T Consensus 1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPR--------QWLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChh--------hhhhhhHhhccceehHHH
Confidence 4688999999998766 4555555555555554 4444433333221110111 011111111121233344
Q ss_pred HHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHh
Q 016348 332 VSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYS 387 (391)
Q Consensus 332 ~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~ 387 (391)
..+..+++.++...+....++|+++.+++++++||+++..+++|.++++.|+++.+
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 44677999999999999999999999999999999999999999999999998764
No 39
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=98.75 E-value=7.3e-08 Score=84.23 Aligned_cols=216 Identities=17% Similarity=0.243 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecc--ccc
Q 016348 162 WKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTE--LNF 239 (391)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~--~~~ 239 (391)
.++..|.+++.+..++.+..+++.++++.++.+.++.-.|+.+++++.+|+|+...++++.++.+.|++++...| ...
T Consensus 53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~ 132 (290)
T KOG4314|consen 53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD 132 (290)
T ss_pred eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence 445668888888888999999999999999999999999999999999999999999999999999999998654 345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCch-hHhHHHHHHHHHHHH-HH-HHHHhcchhhhHhhhhh-hhhhhchHH
Q 016348 240 NMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSG-MNYYACLSILSLLIL-TP-FAIAVEGPQLWAAGYKT-AMSQIGPQF 315 (391)
Q Consensus 240 ~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~-l~~~~~~~~i~~~~l-~p-~~~~~e~~~~~~~~~~~-~~~~~~~~~ 315 (391)
+++|+..+.+|+..-|+|.++.|+.....+... ..+..+...+.+.+. .| ..+.+.+-.. |+. +...+++
T Consensus 133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~----~qsFA~~PWG~-- 206 (290)
T KOG4314|consen 133 EIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEH----LQSFAAAPWGC-- 206 (290)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHH----HHHHhhCCchh--
Confidence 799999999999999999999998765544333 334444333333222 12 2222222221 221 0011111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 316 IWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 316 l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
+...+.....+|......+..+.|...|+.....-.-......++-+-..+...++|.+++..|..+.
T Consensus 207 ---l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi 274 (290)
T KOG4314|consen 207 ---LCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI 274 (290)
T ss_pred ---hhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence 11111112223433334467777888887766555555556665555578888999999999998764
No 40
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.70 E-value=3.3e-06 Score=78.85 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=140.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHH-hhHHHHHHHHHHHHhcccCChhhHH----HHHhhhhhheeeee
Q 016348 160 EFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLLGETFPLPVYM----SLVPIIGGCALAAV 234 (391)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~-~~~Pv~t~lls~l~l~e~~~~~~~~----~lll~~~Gv~l~~~ 234 (391)
..+..-+..|++..+++..++.|++++.+|.+.=+. ..+-+.+.+.+.++++|.-+..+++ +++++++|+.+.+.
T Consensus 43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~ 122 (269)
T PF06800_consen 43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY 122 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence 446667788999999999999999999988877555 5566779999999999988866654 88899999999876
Q ss_pred cccc--------chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhh-Hhhhh
Q 016348 235 TELN--------FNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLW-AAGYK 305 (391)
Q Consensus 235 ~~~~--------~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~-~~~~~ 305 (391)
.|.+ ....|+...+++.+.|..|.++.|-. +.++....-+++ ++.++.............. ...|.
T Consensus 123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~----~~~~~~~~lPqa-iGm~i~a~i~~~~~~~~~~~k~~~~ 197 (269)
T PF06800_consen 123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF----HVSGWSAFLPQA-IGMLIGAFIFNLFSKKPFFEKKSWK 197 (269)
T ss_pred ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc----CCChhHhHHHHH-HHHHHHHHHHhhcccccccccchHH
Confidence 5432 22569999999999999999997752 245555544433 3333322222111111111 11121
Q ss_pred hhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchh----hhHhHHHHHH
Q 016348 306 TAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPI----NALGAAIAIL 381 (391)
Q Consensus 306 ~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~----~~iG~~li~~ 381 (391)
+ +..++..-.-|...+...++.+..+.=...-+..+++.+.|++++||+=+.. .++|.++++.
T Consensus 198 n-------------il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~ 264 (269)
T PF06800_consen 198 N-------------ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVI 264 (269)
T ss_pred h-------------hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHH
Confidence 1 2233333333444455566776666666666678999999999999986654 5578888888
Q ss_pred HHHH
Q 016348 382 GTFL 385 (391)
Q Consensus 382 Gv~l 385 (391)
|..+
T Consensus 265 G~il 268 (269)
T PF06800_consen 265 GAIL 268 (269)
T ss_pred hhhc
Confidence 7653
No 41
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.68 E-value=1e-06 Score=82.45 Aligned_cols=131 Identities=17% Similarity=0.114 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH-HHHH
Q 016348 99 KIGIYFATWWALNVVFNIYNKKVLNAYPY-PWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAH-TIGH 176 (391)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~nK~~l~~fp~-P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 176 (391)
+...+.++...+....+...|...++.+. +......++..+.+.+........+.. ..+.++|...+..+++. ..+.
T Consensus 128 ~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 206 (260)
T TIGR00950 128 AGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QALSLQWGALLYLGLIGTALAY 206 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHH
Confidence 34455555556666777888999887662 233444567777666544322222222 22455566666666664 6788
Q ss_pred HHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhhe
Q 016348 177 VAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCA 230 (391)
Q Consensus 177 ~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~ 230 (391)
.+.+.++++.+++.++.+.+++|++++++++++++|+++..++.|..+++.|+.
T Consensus 207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 899999999999999999999999999999999999999999999999999873
No 42
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.66 E-value=1.5e-07 Score=76.78 Aligned_cols=136 Identities=18% Similarity=0.238 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHH
Q 016348 243 GFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQ 322 (391)
Q Consensus 243 G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~ 322 (391)
-.++++++++.+++..++.|-..++.+ +...+..-+.+...++..+.. ..++ |+.. ...++.-+..++.+
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vd--p~~At~IRtiVi~~~l~~v~~-~~g~------~~~~-~~~~~k~~lflilS 73 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVD--PDFATTIRTIVILIFLLIVLL-VTGN------WQAG-GEIGPKSWLFLILS 73 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccC--ccHHHHHHHHHHHHHHHHHHH-hcCc------eecc-cccCcceehhhhHH
Confidence 357899999999999999998877644 333332223333333333322 2222 2111 11122233344556
Q ss_pred HHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 323 SIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 323 ~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
++.+.+-.+..|+.++.-.+....-..-..+++++++|++++||+++..+++|+.++.+|..+.++
T Consensus 74 Gla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 74 GLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 665555455557788776666666666677899999999999999999999999999999876543
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.55 E-value=5.9e-06 Score=79.28 Aligned_cols=143 Identities=14% Similarity=0.115 Sum_probs=99.9
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHH
Q 016348 236 ELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQF 315 (391)
Q Consensus 236 ~~~~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~ 315 (391)
|.+....|.++++++++.|+...++.|.. .+ .++.....+-..++.+++.+......+.+.....+. ....
T Consensus 2 ~~~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~--~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~------~~~~ 72 (296)
T PRK15430 2 DAKQTRQGVLLALAAYFIWGIAPAYFKLI-YY--VPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQ------TPQK 72 (296)
T ss_pred CchhhhhHHHHHHHHHHHHHHHHHHHHHh-cC--CCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHc------CHHH
Confidence 33445689999999999999999999764 33 556666666566776666655432211110000010 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHh
Q 016348 316 IWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYS 387 (391)
Q Consensus 316 l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~ 387 (391)
.......+.....++...++.++++++...++..+..|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 73 IFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 112223333344455566788999999999999999999999999999999999999999999999998753
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.48 E-value=4.2e-06 Score=79.64 Aligned_cols=132 Identities=14% Similarity=0.173 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHH
Q 016348 244 FMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQS 323 (391)
Q Consensus 244 ~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 323 (391)
+.+.+++++++|.+++..||..++++ +...+. .....+++.|+........ .|... ...........+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~--~~~~~~--~~~~~~~l~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~ 70 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP--DFLWWA--LLAHSVLLTPYGLWYLAQV----GWSRL----PATFWLLLAISA 70 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh--HHHHHH--HHHHHHHHHHHHHHhcccC----CCCCc----chhhHHHHHHHH
Confidence 56789999999999999997765432 233332 3344555666654321011 11110 001112233344
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHh
Q 016348 324 IFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYS 387 (391)
Q Consensus 324 ~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~ 387 (391)
+....++...+...++.++...+...+..|+++.+++++++||+++..+++|.++++.|+++..
T Consensus 71 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~ 134 (281)
T TIGR03340 71 VANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG 134 (281)
T ss_pred HHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 4444555556778899999999999999999999999999999999999999999999998754
No 45
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.47 E-value=3e-06 Score=69.13 Aligned_cols=65 Identities=17% Similarity=0.144 Sum_probs=59.7
Q ss_pred HHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 170 VAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 170 ~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
+++.....+...+++.+|++.+..+.++.++++++++++++||++++++++|+.++++|++++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 34567888889999999999999999999999999999999999999999999999999987653
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.46 E-value=5.7e-06 Score=81.41 Aligned_cols=134 Identities=16% Similarity=0.194 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHHhccCCC----CCCCHHHHHHHHHHHHHHHH
Q 016348 100 IGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLI-SWATRIAEP----PNTDLEFWKTLFPVAVAHTI 174 (391)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~-~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~ 174 (391)
+..+.+....++...++..|...+++|.+...++++..++.+.+.+ ......... ...+...+ .++..++...+
T Consensus 190 G~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~i~y~~i~t~l 268 (358)
T PLN00411 190 GGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLI-TIVTMAIITSV 268 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHH-HHHHHHHHHHH
Confidence 4444444445555666788888888885666677776666555432 222211110 01111211 23333443345
Q ss_pred HHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 175 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 175 ~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
...+.++++++.+++.+.+...++|++++++++++++|++++.+++|.+++++|+.++..
T Consensus 269 ay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~ 328 (358)
T PLN00411 269 YYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMW 328 (358)
T ss_pred HHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 667889999999999999999999999999999999999999999999999999998754
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.44 E-value=8.2e-06 Score=78.18 Aligned_cols=131 Identities=15% Similarity=0.115 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH-HHHHHH
Q 016348 100 IGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAH-TIGHVA 178 (391)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~ 178 (391)
+.++.++...+...+.+..|+..++.+ |....... ..+.+.+.......... ...+...|...+..+++. .+++.+
T Consensus 149 G~ll~l~aa~~~a~~~v~~r~~~~~~~-~~~~~~~~-~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~lgv~~t~~~~~l 225 (293)
T PRK10532 149 GAALALGAGACWAIYILSGQRAGAEHG-PATVAIGS-LIAALIFVPIGALQAGE-ALWHWSILPLGLAVAILSTALPYSL 225 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCC-chHHHHHH-HHHHHHHHHHHHHccCc-ccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555566677788877766 65554433 44444333222221111 122334444455666664 577778
Q ss_pred hhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeee
Q 016348 179 ATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233 (391)
Q Consensus 179 ~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~ 233 (391)
.++++++++++.++++..++|++.+++++++++|+++..+++|..++++|++...
T Consensus 226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988764
No 48
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.40 E-value=1.8e-05 Score=74.14 Aligned_cols=139 Identities=12% Similarity=0.141 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHH
Q 016348 242 IGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAA 321 (391)
Q Consensus 242 ~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~ 321 (391)
.|.+++++++++|+...+..|.. .+ .++.....+=..++.+++.+........+.....+... .. ......+..
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~--~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~ 75 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KP--LPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRI-QK--RPLILSLLL 75 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-cc--CCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCc-cc--chHHHHHHH
Confidence 48899999999999999999973 33 55555554445566655555432222111000011100 00 011222333
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 322 QSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 322 ~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
.+++...++...+..++++++.+.++..+..|+++.++++++++|+++..+++|.++.++|+.+.
T Consensus 76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li 140 (256)
T TIGR00688 76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN 140 (256)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 44444455555677899999999999999999999999999999999999999999999998865
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.36 E-value=1.1e-05 Score=77.52 Aligned_cols=131 Identities=11% Similarity=0.015 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 016348 100 IGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAA 179 (391)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 179 (391)
+.++.+....+...+++++|..-++.+ |.... ....+..+.......+.. ....+.+.|...+..++...+...+.
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~~~~~-~~~~~--~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~t~~~~~l~ 232 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYARGKN-GITLF--FILTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAAAMGFGYAAW 232 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCC-chhHH--HHHHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555666667778888876655 55332 222222222222222211 11233445655666665556788899
Q ss_pred hhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 180 TVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 180 ~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
+.++++.+++.++.+.+.+|++.++++++++||+++..+++|.+++++|+.+...
T Consensus 233 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 233 NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 9999999999999999999999999999999999999999999999999977643
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.34 E-value=1.4e-05 Score=76.54 Aligned_cols=134 Identities=16% Similarity=0.089 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHH-HHhccCCCCCCCHHHHHHHHHHHHHH-HHHHH
Q 016348 100 IGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLIS-WATRIAEPPNTDLEFWKTLFPVAVAH-TIGHV 177 (391)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~-~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~ 177 (391)
+.++.++...+.......+|..-+. .+...+..++.++.+.+.+. +..........+.+.|..++..++.. .++..
T Consensus 151 G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~ 228 (292)
T PRK11272 151 GAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAIS 228 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444445555667776432 24455667777776654433 22221111112345566677777764 57788
Q ss_pred HhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeec
Q 016348 178 AATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVT 235 (391)
Q Consensus 178 ~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~ 235 (391)
+.+.++++.+++.+.++..++|++.++++++++||+++..+++|.+++++|+.+....
T Consensus 229 l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 229 AYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887543
No 51
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.19 E-value=2.8e-05 Score=74.64 Aligned_cols=63 Identities=21% Similarity=0.302 Sum_probs=58.8
Q ss_pred HHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeee
Q 016348 171 AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233 (391)
Q Consensus 171 ~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~ 233 (391)
.+..+..+...|+.+.|.+..+-+.+..-++.++++..++|||++++.+.|..+++.|..++.
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 457788889999999999999999999999999999999999999999999999999998764
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.15 E-value=7e-05 Score=62.68 Aligned_cols=121 Identities=15% Similarity=0.151 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHH
Q 016348 242 IGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAA 321 (391)
Q Consensus 242 ~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~ 321 (391)
.|+++++.+.++.+..+++.|+.+++....+.... . ...+ .. ..+ | + ..++..++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~---~-~~~~----~~-~~~-p------~--------~~i~lgl~~ 57 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD---F-IAAL----LA-FGL-A------L--------RAVLLGLAG 57 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH---H-HHHH----HH-Hhc-c------H--------HHHHHHHHH
Confidence 48899999999999999999998764321111110 0 0000 00 000 0 0 012223344
Q ss_pred HHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHH--HhCCccchhhhHhHHHHHHHHHHHhhcc
Q 016348 322 QSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSII--IFHTPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 322 ~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l--~fge~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
.++.+++| ...+++.+.....-.-...++...+.++. +|||++++.+++|.+++++|+++.++.+
T Consensus 58 ~~la~~~w----~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 58 YALSMLCW----LKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHH----HHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 44545555 45678888887777666767777777775 8999999999999999999999987654
No 53
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.10 E-value=0.00013 Score=70.09 Aligned_cols=136 Identities=14% Similarity=0.034 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChH--HHHHHHHHHHHHHHH-HHHHhccCC-----CCCCCHHHHHHHHHHHH
Q 016348 99 KIGIYFATWWALNVVFNIYNKKVLNAYPYPW--LTSTLSLACGSLMML-ISWATRIAE-----PPNTDLEFWKTLFPVAV 170 (391)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~--~lt~~~~~~~~l~ll-~~~~~~~~~-----~~~~~~~~~~~~l~~~~ 170 (391)
.+.++.++...++....+..|...++.+.|. .....+.+.+.+... ......... ....+...|..++..++
T Consensus 143 ~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i 222 (299)
T PRK11453 143 LGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAF 222 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHH
Confidence 3445555555666667778888776655333 233344444433322 112221110 11224455666666666
Q ss_pred HH-HHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 171 AH-TIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 171 ~~-~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
+. .++..+.+.++++.++..+..+..++|++.++++++++||+++..+++|..++++|+.+...
T Consensus 223 ~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 223 VATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 65 57778889999999999999999999999999999999999999999999999999987643
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=97.95 E-value=0.0001 Score=70.77 Aligned_cols=133 Identities=12% Similarity=0.047 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--cCCChHHHHHHHHHHHHHHHHHH-HHhccCC-CCC--------CC-HHHHHHHH
Q 016348 100 IGIYFATWWALNVVFNIYNKKVLN--AYPYPWLTSTLSLACGSLMMLIS-WATRIAE-PPN--------TD-LEFWKTLF 166 (391)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~nK~~l~--~fp~P~~lt~~~~~~~~l~ll~~-~~~~~~~-~~~--------~~-~~~~~~~l 166 (391)
+.+++++....+....+..|...+ +++ |..++..+...+.+++.+. +...... .+. .. ...+...+
T Consensus 146 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (302)
T TIGR00817 146 GFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL 224 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence 444555555666667788888887 565 7778888887777665443 2222111 000 00 01111122
Q ss_pred HHHH-HHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeee
Q 016348 167 PVAV-AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233 (391)
Q Consensus 167 ~~~~-~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~ 233 (391)
..++ ++...+.+.+.+++++++..+++....+|+++++++++++||+++..+++|.+++++|+.+..
T Consensus 225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 2222 233334566689999999999999999999999999999999999999999999999998764
No 55
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.91 E-value=0.0081 Score=58.52 Aligned_cols=228 Identities=11% Similarity=0.046 Sum_probs=130.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHH-HhhHHHHHHHHHHHHhcccC---C----hhhHHHHHhhhhhh
Q 016348 158 DLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLLGETF---P----LPVYMSLVPIIGGC 229 (391)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pv~t~lls~l~l~e~~---~----~~~~~~lll~~~Gv 229 (391)
+...+..-+..|++..+++..+..+++++.++.+.-+ ..++-++..++..++++|-. + ....++++++++|+
T Consensus 69 ~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi 148 (345)
T PRK13499 69 SGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGV 148 (345)
T ss_pred CHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHH
Confidence 3445666778888999999999999999999988744 45567788888888888643 2 45677889999999
Q ss_pred eeeee----ccc--------c-chHHHHHHHHHHHHHHHHHHHHHhhcC--C----CCCCchhHhHHHH---HHHHHHHH
Q 016348 230 ALAAV----TEL--------N-FNMIGFMGAMISNLAFVFRNIFSKKGM--K----GKSVSGMNYYACL---SILSLLIL 287 (391)
Q Consensus 230 ~l~~~----~~~--------~-~~~~G~~~~l~s~l~~a~~~v~~k~~~--~----~~~~~~l~~~~~~---~~i~~~~l 287 (391)
++... .|. + ....|++.++++.+.+++|+......+ + +...++.....++ ..++.++.
T Consensus 149 ~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~ 228 (345)
T PRK13499 149 AIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAIT 228 (345)
T ss_pred HHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH
Confidence 98865 332 1 236799999999999999995433321 1 1123333222222 22333333
Q ss_pred HHHHHHhc--chhhhH--hhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccChh----HHHHHHHHHHHHHHHH
Q 016348 288 TPFAIAVE--GPQLWA--AGYKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPL----TFSIGNTMKRISVIVS 359 (391)
Q Consensus 288 ~p~~~~~e--~~~~~~--~~~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~----t~si~~~l~pv~~ii~ 359 (391)
-....... .++.+. .+....-.....+. ....+.++.-+..+...++..++.+.. .+.+..-+.-+++.+.
T Consensus 229 n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~-l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw 307 (345)
T PRK13499 229 NLGFCFIRLAKNKDLSLKADFSLAKPLLITNV-LLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW 307 (345)
T ss_pred HHHHHHHHHhhCCCcccchhccccchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence 22211110 101000 00100000000111 112233443333444444444555222 2223334444777778
Q ss_pred HHHHhCCccc------hhhhHhHHHHHHHHHHHh
Q 016348 360 SIIIFHTPVQ------PINALGAAIAILGTFLYS 387 (391)
Q Consensus 360 g~l~fge~~t------~~~~iG~~li~~Gv~ly~ 387 (391)
|+ +++|.=+ ...++|.+++++|..+..
T Consensus 308 Gi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig 340 (345)
T PRK13499 308 GL-VLKEWKGASRRPVRVLSLGCVVIILAANIVG 340 (345)
T ss_pred hh-hhhhccCCCccchhHHHHHHHHHHHHHHHHh
Confidence 88 5999766 677899999999887654
No 56
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=97.87 E-value=0.00064 Score=58.18 Aligned_cols=130 Identities=12% Similarity=0.082 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-----C-CChHHHHHHHHHHHHHHHHHH-HHhccCCC-------CC----CCHHHHHH
Q 016348 103 YFATWWALNVVFNIYNKKVLNA-----Y-PYPWLTSTLSLACGSLMMLIS-WATRIAEP-------PN----TDLEFWKT 164 (391)
Q Consensus 103 ~~~~~~~~~~~~~~~nK~~l~~-----f-p~P~~lt~~~~~~~~l~ll~~-~~~~~~~~-------~~----~~~~~~~~ 164 (391)
+.+....+.....++.|..+++ . ..|..+....-..+.+.+.+. ...+..+. .. ...+.+..
T Consensus 4 ~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (153)
T PF03151_consen 4 LALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFL 83 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHH
Confidence 3444455666667788888876 2 236655555555555444332 22221110 00 02244555
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 165 LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 165 ~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
++..+++....+.+.+..++++++-.++++.....+.+.+++.++++|+++..++.|+++.++|+.+-
T Consensus 84 ~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 84 LILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 66667777888889999999999999999999999999999999999999999999999999999764
No 57
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.84 E-value=0.00075 Score=63.55 Aligned_cols=133 Identities=17% Similarity=0.172 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH-HHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH-HHH
Q 016348 99 KIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTST-LSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHT-IGH 176 (391)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~-~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~ 176 (391)
....+.++.-.........+|... +.+ +..... .++....+..... ...... .......|......+++.. .++
T Consensus 154 ~g~~~~l~a~~~~a~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~g~~~~~i~~ 229 (292)
T COG0697 154 LGLLLALAAALLWALYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLF-FLSGFG-APILSRAWLLLLYLGVFSTGLAY 229 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHH-Hhcccc-ccCCHHHHHHHHHHHHHHHHHHH
Confidence 344444444444446667778777 433 433333 4444222222222 221111 2234555777778888775 688
Q ss_pred HHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeec
Q 016348 177 VAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVT 235 (391)
Q Consensus 177 ~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~ 235 (391)
.+.+.+++..+++....+..++|++.+++++++++|+++..+++|..+++.|+.+....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 230 LLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999877543
No 58
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.79 E-value=0.00032 Score=67.15 Aligned_cols=127 Identities=13% Similarity=0.066 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH---HHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHH
Q 016348 100 IGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSL---ACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGH 176 (391)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~---~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 176 (391)
+.++.++.-.....+...+|.. +++ |...++.+. ..+++....... +.+|...+..|. .+..|+++.+.+
T Consensus 153 Gi~~~l~sg~~y~~~~~~~~~~--~~~-~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~Gi~~~ia~ 225 (290)
T TIGR00776 153 GILLLLMSTIGYLVYVVVAKAF--GVD-GLSVLLPQAIGMVIGGIIFNLGHI---LAKPLKKYAILL-NILPGLMWGIGN 225 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc--CCC-cceehhHHHHHHHHHHHHHHHHHh---cccchHHHHHHH-HHHHHHHHHHHH
Confidence 3333333334444555677765 344 665544443 333333322221 112222333333 445888888888
Q ss_pred HHhhhhhc-ccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhH----HHHHhhhhhheeee
Q 016348 177 VAATVSMS-KVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVY----MSLVPIIGGCALAA 233 (391)
Q Consensus 177 ~~~~~al~-~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~----~~lll~~~Gv~l~~ 233 (391)
.++..+.+ +.+++.+.++.+.+|+...+++.+++||+.+++++ +|.+++++|+.+..
T Consensus 226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 88989999 99999999999999999999999999999999999 99999999988764
No 59
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=97.72 E-value=0.0013 Score=64.73 Aligned_cols=134 Identities=14% Similarity=-0.019 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC-----C-hHHHHHHHHHHHHHHHHHHHH-hccCC-----------CCCCC-H
Q 016348 99 KIGIYFATWWALNVVFNIYNKKVLNAYP-----Y-PWLTSTLSLACGSLMMLISWA-TRIAE-----------PPNTD-L 159 (391)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~nK~~l~~fp-----~-P~~lt~~~~~~~~l~ll~~~~-~~~~~-----------~~~~~-~ 159 (391)
.+.++.++...++...+++.|..+++.+ . +..+.......+.++++.... ....+ ..... .
T Consensus 194 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~ 273 (350)
T PTZ00343 194 LAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKG 273 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchH
Confidence 3445555556666777788899887542 2 333444445566555433221 11100 00000 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 160 EFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
..+...+..++.+...+.+.+.+++++++..+++...+.|+++.++++++++|+++..+++|.+++++|+.+.
T Consensus 274 ~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 274 IIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 1112223334445555555667999999999999999999999999999999999999999999999999765
No 60
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.66 E-value=0.00021 Score=59.77 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHH--HhcccCChhhHHHHHhhhhhheeeeec
Q 016348 165 LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRF--LLGETFPLPVYMSLVPIIGGCALAAVT 235 (391)
Q Consensus 165 ~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l--~l~e~~~~~~~~~lll~~~Gv~l~~~~ 235 (391)
+...-+++.+..++.+.+++..+++.+.-+.+..+.++++.++. ++||++++++++|++++++|+.++..+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 33334456788889999999999999999999999888888885 899999999999999999999988654
No 61
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.65 E-value=0.0013 Score=60.15 Aligned_cols=132 Identities=16% Similarity=0.108 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHH-HHHHhccCCCCCCCHHHHHHHHHHHHHH-HH
Q 016348 97 KVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMML-ISWATRIAEPPNTDLEFWKTLFPVAVAH-TI 174 (391)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll-~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 174 (391)
+..+..+-+....++..+.+..|.+-+.-|-+..+ ...+.+++++.+ +....... .-.+.+....-+..+++. .+
T Consensus 146 Dp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~-a~gm~vAaviv~Pig~~~ag~--~l~~p~ll~laLgvavlSSal 222 (292)
T COG5006 146 DPVGVALALGAGACWALYIVLGQRAGRAEHGTAGV-AVGMLVAALIVLPIGAAQAGP--ALFSPSLLPLALGVAVLSSAL 222 (292)
T ss_pred CHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHH-HHHHHHHHHHHhhhhhhhcch--hhcChHHHHHHHHHHHHhccc
Confidence 33455566667788888888889888655534433 344444444433 32222111 112233333444555555 56
Q ss_pred HHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhhee
Q 016348 175 GHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCAL 231 (391)
Q Consensus 175 ~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l 231 (391)
...+...+++..|...+.++.+++|.+.++.++++++|+++..||+++..++.+.+=
T Consensus 223 PYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG 279 (292)
T COG5006 223 PYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG 279 (292)
T ss_pred chHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence 777899999999999999999999999999999999999999999999999887653
No 62
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.53 E-value=0.00073 Score=55.68 Aligned_cols=70 Identities=17% Similarity=0.236 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchHHHHHHH-hhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 165 LFPVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 165 ~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~-~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
.+...+++.....+...+++++|++.+..+- ...-+.+++.+.+++||++++.+++++.++++|+.++..
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 3455666778888889999999999999885 588999999999999999999999999999999988754
No 63
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.52 E-value=0.0042 Score=50.61 Aligned_cols=58 Identities=14% Similarity=0.205 Sum_probs=49.9
Q ss_pred HHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhc
Q 016348 331 QVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQA 389 (391)
Q Consensus 331 ~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~ 389 (391)
...++.++..++ ..+....+.|+++.++|+++|+|+++..+++|.+++++|+.+....
T Consensus 50 ~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~ 107 (113)
T PF13536_consen 50 LLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS 107 (113)
T ss_pred HHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 333556788885 7778888999999999999999999999999999999999987653
No 64
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.52 E-value=0.0012 Score=53.74 Aligned_cols=55 Identities=18% Similarity=0.266 Sum_probs=48.1
Q ss_pred HHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 334 YMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 334 ~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
...+++.+....-..-.+.++.+.+.|+++|||+++..+++|.+++++|+.+..+
T Consensus 55 ~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 55 LLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4467888877777777799999999999999999999999999999999987654
No 65
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.45 E-value=0.0014 Score=52.77 Aligned_cols=69 Identities=16% Similarity=0.107 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchHHHHHHHh-hHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeee
Q 016348 165 LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKS-GEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233 (391)
Q Consensus 165 ~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~-~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~ 233 (391)
.+..-+++.....+...+++++|++.+..+-. ..-+.+++.+.+++||++++.+++++.++++|++.+.
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 34445566777788888999999999988776 6688899999999999999999999999999998764
No 66
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.40 E-value=0.0013 Score=53.37 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHhhhhhcccchHHHHHHHh-hHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 166 FPVAVAHTIGHVAATVSMSKVAVSFTHIIKS-GEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 166 l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~-~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
...-+++.+...+...+++++|++.+..+.+ ..-+.+++.+++++||++++.+++++.++++|+.++..
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3444556677777788999999999998865 67888999999999999999999999999999998754
No 67
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.40 E-value=0.0024 Score=51.68 Aligned_cols=68 Identities=13% Similarity=0.128 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchHHHHHHHh-hHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 165 LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKS-GEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 165 ~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~-~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
.+...+++.....+...+++++|++.+..+-. ..-+.+++.+.+++||++++.+++++.++++|+...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 44445556677778888999999999988776 557888999999999999999999999999999865
No 68
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=97.39 E-value=0.0096 Score=55.86 Aligned_cols=140 Identities=11% Similarity=0.144 Sum_probs=89.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHH
Q 016348 240 NMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWV 319 (391)
Q Consensus 240 ~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l 319 (391)
+..|+++++.+-+.|+.--.+.|-+ ++ .++....+.=.+.+..++..........+ .+.+. ...+..+...
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~--~~~~eIlahRviwS~~~~l~ll~~~r~~~----~~~~~--~~~p~~~~~~ 75 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-EP--LPATEILAHRVIWSFPFMLALLFLLRQWR----ELKQL--LKQPKTLLML 75 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-cc--CCHHHHHHHHHHHHHHHHHHHHHHHhhhH----HHHHH--HhCcHHHHHH
Confidence 4579999999999999999988765 23 34444444333344333322221122111 11111 1123333333
Q ss_pred HHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 320 AAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 320 ~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
..+++.-..-...-.+....-.....|...+++|++.+++|.++++|.++..|++..++..+|+..-..
T Consensus 76 ~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 76 ALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 333332222112224567888899999999999999999999999999999999999999999986543
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.32 E-value=0.0013 Score=52.63 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHhhhhhcccchHHHHHHHhh-HHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 165 LFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSG-EPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 165 ~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~-~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
.+..-+++.....+...+++++|++.+..+-.. -.+.+++.+++++||+.+..+++++.++++|++....
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 445555667777888899999999998876654 4788999999999999999999999999999987643
No 70
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.17 E-value=0.0032 Score=59.74 Aligned_cols=65 Identities=15% Similarity=0.213 Sum_probs=60.0
Q ss_pred HHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeec
Q 016348 171 AHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVT 235 (391)
Q Consensus 171 ~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~ 235 (391)
.+..|..+++.|..+.|.+..+-+-++..++.++++..+++||+++...+|..++++|-.+++..
T Consensus 73 tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 73 TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 45778888999999999999999999999999999999999999999999999999999887653
No 71
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.84 E-value=0.016 Score=55.78 Aligned_cols=134 Identities=16% Similarity=0.222 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHHHHH-HHH--hcc-CCC---CCCCHHHHHHHHHHHHH
Q 016348 100 IGIYFATWWALNVVFNIYNKKVLNAYP-YPWLTSTLSLACGSLMMLI-SWA--TRI-AEP---PNTDLEFWKTLFPVAVA 171 (391)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~nK~~l~~fp-~P~~lt~~~~~~~~l~ll~-~~~--~~~-~~~---~~~~~~~~~~~l~~~~~ 171 (391)
+.+++.+...+......+.|+++++++ .++-..+..-..+.....+ .+. .+. .+. .....+.+..++..+++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 666667777777777889999998765 3545555544444443322 222 111 100 00112345566677777
Q ss_pred HHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeee
Q 016348 172 HTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233 (391)
Q Consensus 172 ~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~ 233 (391)
...++.+.+.-.+..++-..+++..+--+++.+++.+++++++++.+|.|+++.+.|..+-.
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~ 296 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYS 296 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHH
Confidence 77777777777888899899999999999999999999999999999999999999987653
No 72
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.72 E-value=0.013 Score=46.16 Aligned_cols=59 Identities=17% Similarity=0.225 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhhhhhcccchHHHHHHH-hhHHHHHHHHHHHHhcccCChhhHHHHHhh
Q 016348 167 PVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLLGETFPLPVYMSLVPI 225 (391)
Q Consensus 167 ~~~~~~~~~~~~~~~al~~~s~s~~~ii~-~~~Pv~t~lls~l~l~e~~~~~~~~~lll~ 225 (391)
..-.++..+..+...+++++|.+.+..+- ....+.+++.+.+++||+++..+++++.++
T Consensus 34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33346778888889999999999997765 588999999999999999999999998764
No 73
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=96.61 E-value=0.037 Score=52.01 Aligned_cols=71 Identities=21% Similarity=0.229 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHH----HHHhhhhhhe
Q 016348 159 LEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYM----SLVPIIGGCA 230 (391)
Q Consensus 159 ~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~----~lll~~~Gv~ 230 (391)
++.|+ -+..|+++..++.+...|.+.+.++..-.+.++.+++..+.+.+++||+=+++++. +++++++|.+
T Consensus 193 k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 193 KKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred cchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 34444 56889999999999999999999999999999999999999999999998877654 5555555544
No 74
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=96.56 E-value=0.036 Score=53.93 Aligned_cols=141 Identities=12% Similarity=0.074 Sum_probs=88.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCC--CHHHHHHHHHHHHHHH
Q 016348 96 QKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNT--DLEFWKTLFPVAVAHT 173 (391)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~ 173 (391)
+.+++-++++..-.+....+.+.|+.+++.|....+....+....+...........+.... +.+.+..++..+++..
T Consensus 165 ~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~~lf 244 (334)
T PF06027_consen 165 NPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYALCLF 244 (334)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHHHHH
Confidence 44555556665556666677788999988774334433333222222111111222111111 2222333333444443
Q ss_pred HHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeecc
Q 016348 174 IGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTE 236 (391)
Q Consensus 174 ~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~ 236 (391)
....+....++..++....+-..+..++.++++.+++|+++++..++|.+++++|.++....+
T Consensus 245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 334455667888888777777788899999999999999999999999999999999986543
No 75
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.47 E-value=0.014 Score=54.42 Aligned_cols=71 Identities=17% Similarity=0.317 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 318 WVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 318 ~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
....-+++|...|...|..++.++|.++.+....|-+++.++++++++.+++..||++..+.++|+.+...
T Consensus 19 ~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~ 89 (244)
T PF04142_consen 19 KLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQL 89 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeec
Confidence 34456777888899999999999999999999999999999999999999999999999999999987643
No 76
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.46 E-value=0.07 Score=43.32 Aligned_cols=53 Identities=13% Similarity=0.189 Sum_probs=43.8
Q ss_pred HhhccC-hhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 336 SLDEIS-PLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 336 ~l~~~s-~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
.+++++ ...|++..-+..+.+.+.|+++|||++++.+++|+++++.|+...+.
T Consensus 50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 455554 34566666677888899999999999999999999999999998765
No 77
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.42 E-value=0.088 Score=42.16 Aligned_cols=55 Identities=16% Similarity=0.333 Sum_probs=46.7
Q ss_pred HhhccC-hhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhcc
Q 016348 336 SLDEIS-PLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 336 ~l~~~s-~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
.+|+++ .+.|++..-.-.+.+.+.|+++|||+++..+++|..++++|+...+...
T Consensus 50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 356654 4567888888889999999999999999999999999999999877654
No 78
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.39 E-value=0.0014 Score=59.85 Aligned_cols=215 Identities=14% Similarity=0.140 Sum_probs=130.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHH-hhHHHHHHHHHHHHhcccCChhhH----HHHHhhhhhheee
Q 016348 158 DLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLLGETFPLPVY----MSLVPIIGGCALA 232 (391)
Q Consensus 158 ~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~-~~~Pv~t~lls~l~l~e~~~~~~~----~~lll~~~Gv~l~ 232 (391)
....+..-+..|++...++..++-|++++.+|-+.=+. .++-+-+.+++.+.++|-.+..+. .+++++++|+.+.
T Consensus 55 T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lT 134 (288)
T COG4975 55 TLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLT 134 (288)
T ss_pred chhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEe
Confidence 34445556677788899999999999999988777443 345667788999999998886543 4788899999999
Q ss_pred eecccc--------chHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHH-HHHHhcchhhhHhh
Q 016348 233 AVTELN--------FNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTP-FAIAVEGPQLWAAG 303 (391)
Q Consensus 233 ~~~~~~--------~~~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p-~~~~~e~~~~~~~~ 303 (391)
...|-+ +--.|+...+.|.+.|..|.++.+.. +.+.....-++. ++.++... +...-+........
T Consensus 135 s~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f----~v~g~saiLPqA-iGMv~~ali~~~~~~~~~~~K~t 209 (288)
T COG4975 135 SKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF----DVDGLSAILPQA-IGMVIGALILGFFKMEKRFNKYT 209 (288)
T ss_pred eeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc----cccchhhhhHHH-HHHHHHHHHHhhcccccchHHHH
Confidence 876531 12468888889999999998877643 245555444332 33333222 21111112221222
Q ss_pred hhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhh----hHhHHHH
Q 016348 304 YKTAMSQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPIN----ALGAAIA 379 (391)
Q Consensus 304 ~~~~~~~~~~~~l~~l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~----~iG~~li 379 (391)
|.+. ..++.--.-|...+...++.+-.+.=...-+--+++.+-|+++++|+=|..+ ++|++++
T Consensus 210 ~~ni-------------i~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiili 276 (288)
T COG4975 210 WLNI-------------IPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILI 276 (288)
T ss_pred HHHH-------------hhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHH
Confidence 2221 1122111223333333344332222112222336778899999999877665 5678888
Q ss_pred HHHHHHHhhcc
Q 016348 380 ILGTFLYSQAK 390 (391)
Q Consensus 380 ~~Gv~ly~~~k 390 (391)
++|..+....|
T Consensus 277 vvgai~lg~~K 287 (288)
T COG4975 277 VVGAILLGIAK 287 (288)
T ss_pred HHHhhhhheec
Confidence 88887765554
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.39 E-value=0.078 Score=42.64 Aligned_cols=54 Identities=9% Similarity=0.295 Sum_probs=46.0
Q ss_pred HhhccC-hhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhhc
Q 016348 336 SLDEIS-PLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQA 389 (391)
Q Consensus 336 ~l~~~s-~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~~ 389 (391)
.+|+++ .+.|++..-+..+.+.+.|+++|||++++.+++|+.++++|+...+..
T Consensus 49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~ 103 (105)
T PRK11431 49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS 103 (105)
T ss_pred HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence 355554 567788888888999999999999999999999999999999887654
No 80
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.04 E-value=0.02 Score=46.49 Aligned_cols=70 Identities=21% Similarity=0.273 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchHHHHHH-HhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 162 WKTLFPVAVAHTIGHVAATVSMSKVAVSFTHII-KSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
|+..+|..+- -.+.+.+++.+...+.|.+.-+ .++.=+||++.++++.+|..+++.++|+.++++|+.+.
T Consensus 42 ~~y~ipf~lN-q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 42 PKYIIPFLLN-QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 5556655544 4556667889999999999877 59999999999988888888899999999999999875
No 81
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=95.94 E-value=0.16 Score=41.86 Aligned_cols=53 Identities=11% Similarity=0.323 Sum_probs=43.0
Q ss_pred HhhccC-hhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 336 SLDEIS-PLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 336 ~l~~~s-~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
.+++++ ...|++..-+.-+.+.+.|+++|||++++.+++|++++++|+...+.
T Consensus 50 al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l 103 (120)
T PRK10452 50 AVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKS 103 (120)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhc
Confidence 455553 34556666677888899999999999999999999999999988764
No 82
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=95.91 E-value=0.16 Score=41.05 Aligned_cols=52 Identities=10% Similarity=0.276 Sum_probs=44.0
Q ss_pred HhhccC-hhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHh
Q 016348 336 SLDEIS-PLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYS 387 (391)
Q Consensus 336 ~l~~~s-~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~ 387 (391)
.+|+++ .+.|++..-+..+.+.+.|+++|||++++.+++|.++++.|+...+
T Consensus 55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 355554 4567777778889999999999999999999999999999998764
No 83
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=95.90 E-value=0.11 Score=47.56 Aligned_cols=66 Identities=12% Similarity=0.105 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhhee
Q 016348 166 FPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCAL 231 (391)
Q Consensus 166 l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l 231 (391)
....+..+.+..+..+.++|.+.-...+...+.++++.+++.++++|+++..+++|..+++.|+.+
T Consensus 156 ~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 156 WIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 344455667777888999999999999999999999999999999999999999999999999765
No 84
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.77 E-value=0.37 Score=40.76 Aligned_cols=117 Identities=18% Similarity=0.271 Sum_probs=79.6
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHh-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHH
Q 016348 114 FNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWAT-RIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTH 192 (391)
Q Consensus 114 ~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ 192 (391)
-...|-.+-+....|+.-++..+..+.+.+.+.+.. +....+..+...|+ ...-|++......+..+....+.++.+.
T Consensus 16 q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~vp~lG~~~~~ 94 (138)
T PF04657_consen 16 QAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILVPRLGAALTT 94 (138)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 345566666665568888899888888776544332 22122222222233 3447888888888888999999887777
Q ss_pred HH-HhhHHHHHHHHHHH----HhcccCChhhHHHHHhhhhhhee
Q 016348 193 II-KSGEPAFSVLVSRF----LLGETFPLPVYMSLVPIIGGCAL 231 (391)
Q Consensus 193 ii-~~~~Pv~t~lls~l----~l~e~~~~~~~~~lll~~~Gv~l 231 (391)
.+ ...+-+..+++..+ .-++++++++.+++.+.++|+.+
T Consensus 95 ~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 95 ILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 54 45556667777775 35788999999999999999864
No 85
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=94.83 E-value=1.7 Score=42.19 Aligned_cols=69 Identities=17% Similarity=0.412 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHh
Q 016348 319 VAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYS 387 (391)
Q Consensus 319 l~~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~ 387 (391)
+..-++.|.+.|...|..+...+|.++.+...+|-..+.+++.++++++++..||...++.+.|+.+..
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 344566788888888888999999999999999999999999999999999999999999999998765
No 86
>PRK13499 rhamnose-proton symporter; Provisional
Probab=94.52 E-value=1.3 Score=43.28 Aligned_cols=139 Identities=18% Similarity=0.175 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHH-HhcchhhhHhhhhhhhhhhchHHHHHH
Q 016348 241 MIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAI-AVEGPQLWAAGYKTAMSQIGPQFIWWV 319 (391)
Q Consensus 241 ~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~-~~e~~~~~~~~~~~~~~~~~~~~l~~l 319 (391)
..|+++++++++|++...+-.||. |+-+.+.. +-....+.. ++.|+.. ....+.+. +.....++..+...
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~~-k~w~wE~~--W~v~gi~~w-l~~~~~~g~~~~~~f~-----~~~~~~~~~~~~~~ 76 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKKV-KKWSWETM--WSVGGIFSW-LILPWLIAALLLPDFW-----AYYSSFSGSTLLPV 76 (345)
T ss_pred HHHHHHHHHHHHHhhccccccccc-CCCchhHH--HHHHHHHHH-HHHHHHHHHHHhhhHH-----HHHHhcCHHHHHHH
Confidence 579999999999999999988873 43333222 322222222 2333221 11112211 11121223333333
Q ss_pred HHHHHHHHHHHHHHHHHhhccCh-hHHHHHHHHHHHHHHHHHHHHhCCcc-------chhhhHhHHHHHHHHHHHhh
Q 016348 320 AAQSIFYHLYNQVSYMSLDEISP-LTFSIGNTMKRISVIVSSIIIFHTPV-------QPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 320 ~~~~~~~~l~~~~~~~~l~~~s~-~t~si~~~l~pv~~ii~g~l~fge~~-------t~~~~iG~~li~~Gv~ly~~ 388 (391)
++++++--.-|...+...++++- .+..+..-+.-+.+.+.+.+++||-. ...-++|.+++++|+.+.++
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 44444333334444555555543 33444455667888889999999743 23467888899999998776
No 87
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=93.97 E-value=0.045 Score=50.80 Aligned_cols=116 Identities=11% Similarity=0.079 Sum_probs=79.8
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHH
Q 016348 116 IYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIK 195 (391)
Q Consensus 116 ~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~ 195 (391)
+..+++-++.++-+.++....+....-++.+...+....|...++ |..+.-+|+...+++.+-..++|.--++-..+.+
T Consensus 208 IilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkd-r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~ 286 (346)
T KOG4510|consen 208 IILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKD-RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMT 286 (346)
T ss_pred HHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccc-eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhh
Confidence 455666555554333333332222222222222333344554444 6667788999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 196 SGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 196 ~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
++..++..+...++++|.+++..|.|.++++...+.+
T Consensus 287 ~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 287 YTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred HHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 9999999999999999999999998887766554433
No 88
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=93.69 E-value=2.3 Score=35.88 Aligned_cols=131 Identities=15% Similarity=0.251 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHHHH
Q 016348 244 FMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAAQS 323 (391)
Q Consensus 244 ~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 323 (391)
.++++.+...-+.+..+.-++-+... ++..-.......+...+.......++++. ..+. .. + ++....|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~~~--~~~~----~~-p---~w~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRPSL--ASLS----SV-P---WWAYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccccc--chhc----cC-C---hHHhccH
Confidence 46677788888888777665533211 13332222234444444444444443311 1111 01 1 2223355
Q ss_pred HHHHHHHHHHHHHhhccChhHHHHHHHHHHHH-HHHHHHH-HhC---CccchhhhHhHHHHHHHHHH
Q 016348 324 IFYHLYNQVSYMSLDEISPLTFSIGNTMKRIS-VIVSSII-IFH---TPVQPINALGAAIAILGTFL 385 (391)
Q Consensus 324 ~~~~l~~~~~~~~l~~~s~~t~si~~~l~pv~-~ii~g~l-~fg---e~~t~~~~iG~~li~~Gv~l 385 (391)
+++..+-.......+++++.........-.+. +.++..+ +|| +++++.+++|.+++++|+++
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 66655555556678999999888876554444 3444443 333 57999999999999999863
No 89
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.34 E-value=1.2 Score=42.21 Aligned_cols=136 Identities=7% Similarity=0.049 Sum_probs=86.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHHHhccCC-----CCCCCHHHHHHHHHHH
Q 016348 96 QKVKIGIYFATWWALNVVFNIYNKKVLNAYPY-PWLTSTLSLACGSLMMLISWATRIAE-----PPNTDLEFWKTLFPVA 169 (391)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~nK~~l~~fp~-P~~lt~~~~~~~~l~ll~~~~~~~~~-----~~~~~~~~~~~~l~~~ 169 (391)
....+.+++..+.++-...+-..+.+++++.- ++.+.+.--+..++.-.......... .-+...+.++.++..+
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s 248 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS 248 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence 44556666666666555566677777776541 22222222222222211111111111 1123456778899999
Q ss_pred HHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhhee
Q 016348 170 VAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCAL 231 (391)
Q Consensus 170 ~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l 231 (391)
.+.+.++.+-+.-++.-.+=..++|..+==+++.+++.+.+++++++.+|.++++.++|..+
T Consensus 249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 99999988777766665555555666666778999999999999999999999999988754
No 90
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=92.44 E-value=0.7 Score=44.43 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=38.1
Q ss_pred hhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016348 337 LDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFL 385 (391)
Q Consensus 337 l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~l 385 (391)
+...++...+-.+.+.-++..+++..++||+++...++|.++++.|..+
T Consensus 71 l~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l 119 (300)
T PF05653_consen 71 LGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL 119 (300)
T ss_pred HHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence 3334444444445555689999999999999999999999999999865
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=91.98 E-value=0.78 Score=35.91 Aligned_cols=44 Identities=11% Similarity=0.304 Sum_probs=23.9
Q ss_pred HhhccCh-hHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHH
Q 016348 336 SLDEISP-LTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIA 379 (391)
Q Consensus 336 ~l~~~s~-~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li 379 (391)
.+++++. ..|.+..-+..+.+.+.|+++|||+++..+++|+.++
T Consensus 49 al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 49 ALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 4566543 3446666677889999999999999999999999875
No 92
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.75 E-value=5.5 Score=34.10 Aligned_cols=140 Identities=11% Similarity=0.136 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHHH
Q 016348 241 MIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVA 320 (391)
Q Consensus 241 ~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~ 320 (391)
++..+..+.+..+-..++-+.-++.+..+ ++..........+...+....+..++... +. ... . .-|+..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~~~----~a-~~~---~-~pwW~~ 73 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGHPG----LA-AVA---S-APWWAW 73 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCc----hh-hcc---C-CchHHH
Confidence 45567777888888777776655533221 12221111123333333333333443221 11 011 1 112333
Q ss_pred HHHHHHHHHHHHHHHHhhccChhHHHHHHHHHH-HHHHHHHHH-HhC---CccchhhhHhHHHHHHHHHHHhhcc
Q 016348 321 AQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKR-ISVIVSSII-IFH---TPVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 321 ~~~~~~~l~~~~~~~~l~~~s~~t~si~~~l~p-v~~ii~g~l-~fg---e~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
+.|+++-.+-........+.++.+.......-. +.+.++..+ +|| .+++...++|++++++|+++..+.+
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~ 148 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG 148 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 344555555555556678888887776544333 333333333 344 3689999999999999977766654
No 93
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=91.48 E-value=0.53 Score=45.45 Aligned_cols=138 Identities=12% Similarity=0.002 Sum_probs=94.2
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHh--c--CCChHHHHHHHHHHHHHHHH-HHHHh--ccCC---CC-CCCHHHH
Q 016348 94 AAQKVKIGIYFATWWALNVVFNIYNKKVLN--A--YPYPWLTSTLSLACGSLMML-ISWAT--RIAE---PP-NTDLEFW 162 (391)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~nK~~l~--~--fp~P~~lt~~~~~~~~l~ll-~~~~~--~~~~---~~-~~~~~~~ 162 (391)
..=+..+..+...+......-+++.|.++. + .+ ++-+...+--++..+++ ..+.. +... .. ..+...+
T Consensus 158 ~~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T KOG1441|consen 158 LSFNLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFL 236 (316)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhH
Confidence 334666777777888888888899999994 2 44 55555555445555444 33322 1111 01 1122222
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeee
Q 016348 163 KTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233 (391)
Q Consensus 163 ~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~ 233 (391)
..+..+++....+...+..+..+++=++++.....=+++...++++++|+.++.+.+|..+.++|+.+-.
T Consensus 237 -~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 237 -ILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 3344446666667778888999988888888888888888899999999999999999999999998764
No 94
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.14 E-value=12 Score=32.10 Aligned_cols=118 Identities=17% Similarity=0.284 Sum_probs=71.2
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHhccCCCC-C-CCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHH
Q 016348 114 FNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEPP-N-TDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFT 191 (391)
Q Consensus 114 ~~~~nK~~l~~fp~P~~lt~~~~~~~~l~ll~~~~~~~~~~~-~-~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~ 191 (391)
-+-.|-.+-+....|..-++..+.++...+.+....+.++.+ . .++..|+ ...-|++.......+......+.+..+
T Consensus 20 Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW-~~~GG~lGa~~vt~s~~l~p~lGa~~t 98 (150)
T COG3238 20 QAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWW-AWIGGLLGAIFVTSSILLAPRLGAATT 98 (150)
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchH-HHHccchhhhhhhhhHHhccchhHHHH
Confidence 344666666667779999999999988776544333322211 1 1121232 334456655555555566666665555
Q ss_pred H-HHHhhHHHHHHHHHHHHh----cccCChhhHHHHHhhhhhheee
Q 016348 192 H-IIKSGEPAFSVLVSRFLL----GETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 192 ~-ii~~~~Pv~t~lls~l~l----~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
. .+.+.+-+..+++..+=. ++++++.+++++++..+|+.++
T Consensus 99 ~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 99 IALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred HHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 4 444555555555554322 4778899999999999996554
No 95
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=85.03 E-value=1.1 Score=41.10 Aligned_cols=70 Identities=14% Similarity=0.225 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhhee
Q 016348 162 WKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCAL 231 (391)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l 231 (391)
|..+..++++.++++++.+.-..+-++=.-+++..+--+|+.+.+.++++..++.+||++-.+.+.|...
T Consensus 241 ~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~ 310 (337)
T KOG1580|consen 241 FWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTA 310 (337)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence 5567788888888988887776666665666677777899999999999999999999999999988654
No 96
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=84.98 E-value=0.65 Score=41.32 Aligned_cols=55 Identities=22% Similarity=0.220 Sum_probs=49.9
Q ss_pred HHHhhccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 334 YMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 334 ~~~l~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
...+++++|...+.....+..++-+++|+++||.+....++..++.+.|+.+.++
T Consensus 71 l~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay 125 (290)
T KOG4314|consen 71 LLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY 125 (290)
T ss_pred HHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence 4568999999999999999999999999999999999999999999998876554
No 97
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=84.96 E-value=2.2 Score=34.69 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016348 348 GNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFL 385 (391)
Q Consensus 348 ~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~l 385 (391)
.|.+.-+++.+.|+++.+|..+...++|.++++.|+.+
T Consensus 74 ~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 74 ANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34555689999998888888899999999999999864
No 98
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=83.81 E-value=3.3 Score=38.79 Aligned_cols=128 Identities=15% Similarity=0.242 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHH-HHHHHHhcchhhhHhhhhhhhhhhchHHHHHHHH
Q 016348 243 GFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLIL-TPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWVAA 321 (391)
Q Consensus 243 G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l-~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l~~ 321 (391)
|++.+++|+++++..-+=.||.- .-|++.++.+++. +..+. ....+..+.+.++. +.++
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~---~gDg~~fQw~~~~-~i~~~g~~v~~~~~~p~f~p----------------~aml 60 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD---TGDGFFFQWVMCS-GIFLVGLVVNLILGFPPFYP----------------WAML 60 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc---CCCcHHHHHHHHH-HHHHHHHHHHHhcCCCccee----------------HHHh
Confidence 66788889998888777777653 2356666544333 22222 22222223332211 1111
Q ss_pred HHHHHHHHHHHHHHHhhccC-hhHHHHHHHHHHHHHHHHHHH-HhCCc-----cchhhhHhHHHHHHHHHHHhhcc
Q 016348 322 QSIFYHLYNQVSYMSLDEIS-PLTFSIGNTMKRISVIVSSII-IFHTP-----VQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 322 ~~~~~~l~~~~~~~~l~~~s-~~t~si~~~l~pv~~ii~g~l-~fge~-----~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
+|.+-..-|....-.++.++ ++-..+.+..+-+.+...|-+ +||++ -...+++|.+++++|..+|...|
T Consensus 61 gG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 61 GGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeec
Confidence 22211112222222233332 222333343444555555544 67654 36789999999999999987644
No 99
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=82.89 E-value=47 Score=32.42 Aligned_cols=137 Identities=20% Similarity=0.212 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCchhHhHHHHHHHHHHHHHHHHHHhcchhhhHhhhhhhhhhhchHHHHHH-
Q 016348 241 MIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLLILTPFAIAVEGPQLWAAGYKTAMSQIGPQFIWWV- 319 (391)
Q Consensus 241 ~~G~~~~l~s~l~~a~~~v~~k~~~~~~~~~~l~~~~~~~~i~~~~l~p~~~~~e~~~~~~~~~~~~~~~~~~~~l~~l- 319 (391)
..|+++..+++++.+.+.+=.||. | +.+--+++...++++.+++-+.....+-|+..+. ........++..
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k--~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i-----~~~~~~~~l~~~~ 77 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-K--GWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSI-----YSATPASTLFWTF 77 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-C--CccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH-----HHhCChhHHHHHH
Confidence 579999999999999988878875 2 3444555555566665544333334444443221 111111111111
Q ss_pred ---HHHHHHHHHHHHHHHHHhhccC-hhHHHHHHHHHHHHHHHHHHHHh-------CCccchhhhHhHHHHHHHHHHHhh
Q 016348 320 ---AAQSIFYHLYNQVSYMSLDEIS-PLTFSIGNTMKRISVIVSSIIIF-------HTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 320 ---~~~~~~~~l~~~~~~~~l~~~s-~~t~si~~~l~pv~~ii~g~l~f-------ge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
++=++.+..|.. .+++++ ++..++..-+-.++..++--++. +++-....++|.+++++|+.+..+
T Consensus 78 l~G~lWGIGgltfGl----~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~ 153 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGL----AMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGK 153 (344)
T ss_pred HHHHHHhcchhhHhH----HHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhH
Confidence 111222222222 234433 33344433333344444433332 333345788999999999988765
Q ss_pred c
Q 016348 389 A 389 (391)
Q Consensus 389 ~ 389 (391)
+
T Consensus 154 A 154 (344)
T PF06379_consen 154 A 154 (344)
T ss_pred H
Confidence 3
No 100
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=74.37 E-value=25 Score=34.71 Aligned_cols=141 Identities=7% Similarity=-0.038 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CChHHHHHHHHHHHHHHHHHHH---HhccCCCCCCCHHHHHHHHHHH
Q 016348 97 KVKIGIYFATWWALNVVFNIYNKKVLNAY----PYPWLTSTLSLACGSLMMLISW---ATRIAEPPNTDLEFWKTLFPVA 169 (391)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~nK~~l~~f----p~P~~lt~~~~~~~~l~ll~~~---~~~~~~~~~~~~~~~~~~l~~~ 169 (391)
.+.+.++-.+--.+-.++..+.|.=.++. .-+.++.+..+.--.++....+ ..+..+.+-.+......++..+
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ 324 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNN 324 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhh
Confidence 34444444444344445555566666543 3455555444333222221222 2232222211222223344555
Q ss_pred HHH-HHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccc
Q 016348 170 VAH-TIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTEL 237 (391)
Q Consensus 170 ~~~-~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~ 237 (391)
+.. ...-++..+|.-..++=.+++-.+.+....++...++.++++++..++|-+.+++|.+++...+.
T Consensus 325 ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 325 LIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 444 46667778888888887788878888778899999999999999999999999999999876543
No 101
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=68.92 E-value=59 Score=29.89 Aligned_cols=72 Identities=6% Similarity=-0.025 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhhee
Q 016348 160 EFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCAL 231 (391)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l 231 (391)
+...+++.-|++..+-.+++-|.++-++...++|+.++.-.-.++.+.++++|..+...+.++++++...++
T Consensus 222 d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~i 293 (309)
T COG5070 222 DSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAI 293 (309)
T ss_pred HHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHH
Confidence 334567777888777778888999999999999999999888999999999999999999999887765443
No 102
>PRK02237 hypothetical protein; Provisional
Probab=68.47 E-value=14 Score=29.70 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 344 TFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 344 t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
.++..+-+--+.+++.++.+-|++|+...++|.+++++|+.+.
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 4455555666788899999999999999999999999999765
No 103
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=66.32 E-value=13 Score=29.68 Aligned_cols=45 Identities=11% Similarity=0.141 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHHhh
Q 016348 344 TFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQ 388 (391)
Q Consensus 344 t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly~~ 388 (391)
.++..+-+--+.+++.++.+-|++|+...++|.+++++|+.+.-.
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 344555556678889999999999999999999999999987543
No 104
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=62.97 E-value=52 Score=31.67 Aligned_cols=133 Identities=12% Similarity=-0.020 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC-hHHHHHHHHHHHHHHHHHHH-HhccC-----CCC-CCCHHHHHHHHHHHHH
Q 016348 100 IGIYFATWWALNVVFNIYNKKVLNAYPY-PWLTSTLSLACGSLMMLISW-ATRIA-----EPP-NTDLEFWKTLFPVAVA 171 (391)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~nK~~l~~fp~-P~~lt~~~~~~~~l~ll~~~-~~~~~-----~~~-~~~~~~~~~~l~~~~~ 171 (391)
+..+..........+..+.|...+.-.. -+-+.+..-+.....+++.+ ..+.. ..+ ..+...+..+..-+++
T Consensus 158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~ 237 (314)
T KOG1444|consen 158 GYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVM 237 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHH
Confidence 3444555556666666788888763221 11122222222222222221 12210 111 1122334445555556
Q ss_pred HHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 172 HTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 172 ~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
..+-.++..+..+..++-.+++.....-..+.+...++.+++.++....|+.+++.|-++-
T Consensus 238 gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y 298 (314)
T KOG1444|consen 238 GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY 298 (314)
T ss_pred HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence 5666777788888888888888876666777777777788888898888888888887654
No 105
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=60.75 E-value=86 Score=25.13 Aligned_cols=54 Identities=17% Similarity=0.216 Sum_probs=35.4
Q ss_pred hhhhhcccchHHHHHHH-hhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 179 ATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 179 ~~~al~~~s~s~~~ii~-~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
+-.+.+..+.+.--++. ..+-...+.++.+++||++++....|.+.+.+++..+
T Consensus 52 NRiG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 52 NRIGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhhhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 33455544443332322 1223334567888999999999999999998888765
No 106
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=60.04 E-value=14 Score=29.61 Aligned_cols=70 Identities=20% Similarity=0.263 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchHHHH-HHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheee
Q 016348 162 WKTLFPVAVAHTIGHVAATVSMSKVAVSFTH-IIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALA 232 (391)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~-ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~ 232 (391)
|.+..|..+-.+ +..+++.-++..+.+.+. +-.+++-.|+++.+..+..|...++.++|..++++|..+.
T Consensus 53 w~Y~iPFllNqc-gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 53 WEYLIPFLLNQC-GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHHHHHHHh-hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 555566554433 445566677777776665 4456678889999987766667789999999999998664
No 107
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=56.05 E-value=5 Score=37.18 Aligned_cols=75 Identities=17% Similarity=0.214 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHH----HHHhhhhhhee
Q 016348 156 NTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYM----SLVPIIGGCAL 231 (391)
Q Consensus 156 ~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~----~lll~~~Gv~l 231 (391)
+.++..| .-...|+....++.+...|-+.+.+++.-.+.++..+...+-+.+++|||=+++++. ++++++.|..+
T Consensus 204 ~~~K~t~-~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 204 RFNKYTW-LNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred chHHHHH-HHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence 3344444 456778888999998888988888888888888888999999999999999987765 44555555544
No 108
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=53.09 E-value=16 Score=29.21 Aligned_cols=29 Identities=7% Similarity=0.021 Sum_probs=25.2
Q ss_pred HHHHHHHhCCccchhhhHhHHHHHHHHHH
Q 016348 357 IVSSIIIFHTPVQPINALGAAIAILGTFL 385 (391)
Q Consensus 357 ii~g~l~fge~~t~~~~iG~~li~~Gv~l 385 (391)
..+++++++|++++.+..|.++++.+++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 34778899999999999999999888764
No 109
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.24 E-value=1.2e+02 Score=24.05 Aligned_cols=33 Identities=21% Similarity=0.242 Sum_probs=28.1
Q ss_pred HHHHHHHHHhcccCChhhHHHHHhhhhhheeee
Q 016348 201 FSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233 (391)
Q Consensus 201 ~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~ 233 (391)
+-+.++.+.+||.+++..+.+.+++.+|+.++.
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 345688899999999999999999999987764
No 110
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=48.96 E-value=60 Score=26.87 Aligned_cols=40 Identities=23% Similarity=0.458 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ChHHHHHH
Q 016348 95 AQKVKIGIYFATWWALNVVFNIYNKKVLNAYP-YPWLTSTL 134 (391)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~nK~~l~~fp-~P~~lt~~ 134 (391)
...+++.+++++.....+++.++-|.+...++ ||++++-+
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~Ql 93 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQL 93 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHh
Confidence 45777888888888888888899999998775 77766655
No 111
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=41.42 E-value=67 Score=30.60 Aligned_cols=49 Identities=18% Similarity=0.158 Sum_probs=37.5
Q ss_pred hccChhHHHHHHHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHHHH
Q 016348 338 DEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLY 386 (391)
Q Consensus 338 ~~~s~~t~si~~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ly 386 (391)
..+++..+...--..-+++-+++.-+++.+++..||.|+..+.+|+...
T Consensus 108 ~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviV 156 (372)
T KOG3912|consen 108 NLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIV 156 (372)
T ss_pred HHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhee
Confidence 3444555544444445788888999999999999999999999998753
No 112
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=39.71 E-value=1.3e+02 Score=28.66 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeeeccccc
Q 016348 162 WKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAVTELNF 239 (391)
Q Consensus 162 ~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~~~~~~ 239 (391)
....+..++...+++.....=++--.+..+.++...-=..|.+++++++.+.++-+-..+.++++.|+.+-..++.+-
T Consensus 260 yGy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 260 YGYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 344455555544444433222333355566666666667889999999999999999899999999998876665443
No 113
>PRK02237 hypothetical protein; Provisional
Probab=39.49 E-value=2e+02 Score=23.15 Aligned_cols=42 Identities=14% Similarity=-0.111 Sum_probs=33.6
Q ss_pred HHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 193 IIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 193 ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
.--....+...+..+.+-|+|+++..+++..++.+|+.++..
T Consensus 64 AYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 64 AYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 333444556667888899999999999999999999987743
No 114
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=37.52 E-value=84 Score=29.87 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=67.1
Q ss_pred HHHHHHHHhcC-CChHHHHHHHHHHHHHHHHHH-HHhcc----CCCCCC-CHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Q 016348 115 NIYNKKVLNAY-PYPWLTSTLSLACGSLMMLIS-WATRI----AEPPNT-DLEFWKTLFPVAVAHTIGHVAATVSMSKVA 187 (391)
Q Consensus 115 ~~~nK~~l~~f-p~P~~lt~~~~~~~~l~ll~~-~~~~~----~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~al~~~s 187 (391)
.++.|..+... .--|.++++.-+-+.++.+.. ...+. ...|+. ...+|..+.+.|++...-.+.+.+-++.++
T Consensus 201 aiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~TS 280 (347)
T KOG1442|consen 201 AIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKVTS 280 (347)
T ss_pred HHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEecc
Confidence 36778665432 234667777766665554432 22221 122222 345666666667765444444444555555
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhhee
Q 016348 188 VSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCAL 231 (391)
Q Consensus 188 ~s~~~ii~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l 231 (391)
+=++.+-....-.-=.+++..+++|.-+...|-+-+++.+|-.+
T Consensus 281 plThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~ 324 (347)
T KOG1442|consen 281 PLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLA 324 (347)
T ss_pred cceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHH
Confidence 44444444444555677888999999998888887777666543
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=34.63 E-value=2.4e+02 Score=22.64 Aligned_cols=41 Identities=12% Similarity=-0.061 Sum_probs=33.9
Q ss_pred HHhhHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeeee
Q 016348 194 IKSGEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAAV 234 (391)
Q Consensus 194 i~~~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~~ 234 (391)
--....+...+..+.+-|+++++..+++..++.+|+.++..
T Consensus 63 YGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 63 YGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 33445666777888899999999999999999999988754
No 116
>PF07331 TctB: Tripartite tricarboxylate transporter TctB family; InterPro: IPR009936 This entry contains bacterial proteins of around 150 residues in length, which have 4 transmembrane domains. Some of the sequences in the entry are annotated as the TctB subunit of the tripartite tricarboxylate transport(TTT) family. However there is no direct evidence to support this annotation as characterised members of this family are not associated with the entry.
Probab=33.30 E-value=2.7e+02 Score=22.79 Aligned_cols=44 Identities=23% Similarity=0.276 Sum_probs=20.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 016348 127 YPWLTSTLSLACGSLMMLISWATRIAEPPNTDLEFWKTLFPVAV 170 (391)
Q Consensus 127 ~P~~lt~~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~l~~~~ 170 (391)
+|..+...-.+++.+.+.-....+.++.+..++..++.......
T Consensus 37 fP~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (141)
T PF07331_consen 37 FPRLLGILLLILSLLLLVRSFRGPDEDEEPFDRVDWKRVLLVLG 80 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccccccccHHHHHHHHHHHH
Confidence 46666666666655544333333222233334444554444333
No 117
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=32.38 E-value=31 Score=33.34 Aligned_cols=36 Identities=11% Similarity=0.320 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHhCCccchhhhHhHHHHHHHHH
Q 016348 349 NTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTF 384 (391)
Q Consensus 349 ~~l~pv~~ii~g~l~fge~~t~~~~iG~~li~~Gv~ 384 (391)
+.+.-+...+++..+++|+++....+|.+++++|..
T Consensus 97 GAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst 132 (335)
T KOG2922|consen 97 GALSVIISAILASFFLKEKLNLLGILGCVLCVVGST 132 (335)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccE
Confidence 334447889999999999999999999999999864
No 118
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=29.98 E-value=17 Score=34.27 Aligned_cols=67 Identities=10% Similarity=0.112 Sum_probs=0.0
Q ss_pred hcccchHHHHHHHhhHHHHHHH-HHHHHhcccCC-hhhHHHHHhhhhhheeeeeccc--cchHHHHHHHHH
Q 016348 183 MSKVAVSFTHIIKSGEPAFSVL-VSRFLLGETFP-LPVYMSLVPIIGGCALAAVTEL--NFNMIGFMGAMI 249 (391)
Q Consensus 183 l~~~s~s~~~ii~~~~Pv~t~l-ls~l~l~e~~~-~~~~~~lll~~~Gv~l~~~~~~--~~~~~G~~~~l~ 249 (391)
++-.+-+-.+++.+.+.+.+.+ +-.+++|+|+- ..-.++++++++-..++..-.. +.-+.|+++.++
T Consensus 44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l 114 (381)
T PF05297_consen 44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFL 114 (381)
T ss_dssp -----------------------------------------------------------------------
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 3333333334444444333333 33344566654 4455555555554444432222 222456554333
No 119
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=27.11 E-value=72 Score=19.33 Aligned_cols=24 Identities=25% Similarity=0.243 Sum_probs=13.7
Q ss_pred ccchhhhHhHHHHHHHHHHHhhcc
Q 016348 367 PVQPINALGAAIAILGTFLYSQAK 390 (391)
Q Consensus 367 ~~t~~~~iG~~li~~Gv~ly~~~k 390 (391)
.-....++|.+++..+.+++.+.|
T Consensus 9 ~~~~~~~~G~~l~~~~~~~~~~rk 32 (34)
T TIGR01167 9 GNSLLLLLGLLLLGLGGLLLRKRK 32 (34)
T ss_pred ccHHHHHHHHHHHHHHHHHheecc
Confidence 344566677765555555555444
No 120
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=23.04 E-value=1.4e+02 Score=28.39 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHhcccCChhhHHHHHhhhhhheeee
Q 016348 197 GEPAFSVLVSRFLLGETFPLPVYMSLVPIIGGCALAA 233 (391)
Q Consensus 197 ~~Pv~t~lls~l~l~e~~~~~~~~~lll~~~Gv~l~~ 233 (391)
+-=++..+++.+.++..+++..|+|..+.++|..+.+
T Consensus 277 lRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa 313 (330)
T KOG1583|consen 277 LRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA 313 (330)
T ss_pred HHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 3345677888888888888888888888888887653
No 121
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.97 E-value=4.1e+02 Score=21.09 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=36.5
Q ss_pred hccChhHHHH--HHHHHHHHHH----HHHHHHhCCccchhhhHhHHHHHHHHHHHh
Q 016348 338 DEISPLTFSI--GNTMKRISVI----VSSIIIFHTPVQPINALGAAIAILGTFLYS 387 (391)
Q Consensus 338 ~~~s~~t~si--~~~l~pv~~i----i~g~l~fge~~t~~~~iG~~li~~Gv~ly~ 387 (391)
.|++-..+|+ .-.++.+++. .+|.+.++|++.+.++.|..+++.|+++.-
T Consensus 59 NRiG~~v~s~~QLK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 59 NRIGHQVYSAAQLKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred chhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 4555544444 4445565554 368889999999999999999999987653
No 122
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=20.93 E-value=8e+02 Score=24.09 Aligned_cols=103 Identities=20% Similarity=0.193 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHHH-hhHHHHHHHHHHHHhc-------ccCChhhHHHHHhhhhhhee
Q 016348 160 EFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIK-SGEPAFSVLVSRFLLG-------ETFPLPVYMSLVPIIGGCAL 231 (391)
Q Consensus 160 ~~~~~~l~~~~~~~~~~~~~~~al~~~s~s~~~ii~-~~~Pv~t~lls~l~l~-------e~~~~~~~~~lll~~~Gv~l 231 (391)
+.+......|++..++...+-.+++|+.++..+-|. .+.-++=.++-.++.+ ++-....++++++..+|+++
T Consensus 71 ~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai 150 (344)
T PF06379_consen 71 STLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAI 150 (344)
T ss_pred hHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHH
Confidence 345566788888888888888899998877766332 2223333333333333 23345788999999999998
Q ss_pred eeec----c-------ccch-HHHHHHHHHHHHHHHHHHHHHh
Q 016348 232 AAVT----E-------LNFN-MIGFMGAMISNLAFVFRNIFSK 262 (391)
Q Consensus 232 ~~~~----~-------~~~~-~~G~~~~l~s~l~~a~~~v~~k 262 (391)
.... | .++| ..|.+.+++|.+..|+.+.=..
T Consensus 151 ~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 151 CGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred HhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 7421 1 1233 4799999999999998887654
Done!