Query 016349
Match_columns 391
No_of_seqs 153 out of 376
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 12:05:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qqy_A Sigma B operon; dodecam 97.2 0.016 5.4E-07 48.0 15.5 120 161-295 12-135 (149)
2 2inc_A Toluene, O-xylene monoo 97.0 0.0024 8.1E-08 66.1 10.5 137 164-307 96-247 (491)
3 3uno_A Probable bacterioferrit 97.0 0.0041 1.4E-07 56.4 10.7 136 160-306 11-148 (189)
4 2y3q_A Bacterioferritin; metal 97.0 0.012 4.2E-07 49.4 12.6 132 161-302 8-139 (158)
5 4am5_A Bacterioferritin; metal 96.9 0.006 2E-07 52.6 10.3 130 161-306 8-139 (159)
6 1eum_A Ferritin 1; ECFTNA, met 96.9 0.0045 1.5E-07 54.1 9.2 133 161-304 7-141 (165)
7 1rcd_A L ferritin; iron storag 96.8 0.0088 3E-07 52.9 11.1 137 159-304 12-152 (173)
8 3qz3_A Ferritin; structural ge 96.8 0.01 3.6E-07 53.3 11.6 137 159-307 14-153 (184)
9 1krq_A Ferritin; H-chain like 96.8 0.0038 1.3E-07 54.7 8.4 133 161-304 7-141 (167)
10 1s3q_A Ferritin; ferroxidase, 96.8 0.0045 1.5E-07 54.9 8.8 137 160-312 8-150 (173)
11 2fkz_A Bacterioferritin; ferro 96.8 0.062 2.1E-06 44.7 15.3 129 161-304 8-141 (155)
12 2cih_A Ferritin heavy chain; a 96.7 0.015 5.3E-07 52.0 11.4 141 155-305 12-157 (183)
13 3e6s_A Ferritin; iron storage, 96.6 0.0097 3.3E-07 52.7 9.8 144 161-316 6-153 (168)
14 3qb9_A Bacterioferritin, BFR; 96.5 0.038 1.3E-06 47.6 12.6 132 161-304 10-143 (174)
15 2v2p_A Ferritin light chain; m 96.5 0.037 1.3E-06 48.9 12.7 134 158-304 10-151 (174)
16 3ka8_A Ferritin, middle subuni 96.5 0.025 8.6E-07 50.4 11.4 141 158-307 11-155 (176)
17 1nfv_A Bacterioferritin; 24 su 96.5 0.039 1.3E-06 47.9 12.3 129 161-306 13-144 (179)
18 2vzb_A Putative bacterioferrit 96.4 0.066 2.3E-06 45.5 13.1 133 161-301 19-157 (170)
19 3pvt_A Phenylacetic acid degra 96.3 0.0011 3.9E-08 65.0 1.7 133 160-306 33-173 (311)
20 3a68_A Sferh-4, ferritin-4, ch 96.3 0.29 1E-05 45.0 17.7 127 157-296 42-180 (212)
21 2jd6_0 Ferritin homolog, ferri 96.2 0.04 1.4E-06 47.8 11.1 125 161-296 7-133 (174)
22 1jgc_A Bacterioferritin, BFR; 96.2 0.067 2.3E-06 45.0 11.8 131 161-304 8-141 (161)
23 3oj5_A Ferritin family protein 96.1 0.023 7.9E-07 50.5 9.2 133 161-304 12-146 (189)
24 3bvf_A Ferritin; iron storage, 96.0 0.029 1E-06 49.8 9.2 126 159-295 19-146 (181)
25 3r2k_A Bacterioferritin, BFR; 96.0 0.07 2.4E-06 45.0 11.1 129 161-305 8-138 (154)
26 3uoi_A Bacterioferritin, BFR; 95.9 0.38 1.3E-05 40.6 15.3 126 161-296 10-135 (161)
27 3fvb_A Bacterioferritin; niaid 95.9 0.35 1.2E-05 42.5 15.6 121 161-296 29-154 (182)
28 3vnx_A Ferritin; 4-helix bundl 95.8 0.58 2E-05 42.8 17.1 141 156-306 36-185 (204)
29 3gvy_A Bacterioferritin; iron 95.6 0.29 9.9E-06 41.4 13.6 131 161-301 8-138 (161)
30 1vlg_A Ferritin; TM1128, struc 95.5 0.089 3.1E-06 46.1 10.4 132 160-306 20-153 (176)
31 3kxu_A Ferritin; iron storage 95.5 0.11 3.7E-06 47.2 10.9 139 158-305 11-153 (191)
32 1j30_A 144AA long hypothetical 95.4 0.16 5.6E-06 43.1 11.3 125 161-305 10-137 (144)
33 1otk_A Protein PAAC, phenylace 95.1 0.069 2.4E-06 50.9 8.6 99 200-306 39-147 (249)
34 2itb_A TRNA-(MS(2)IO(6)A)-hydr 95.0 0.25 8.6E-06 46.1 12.0 134 161-308 29-166 (206)
35 1mty_D Methane monooxygenase h 95.0 0.094 3.2E-06 54.6 10.2 140 161-307 90-246 (512)
36 1z6o_M Ferritin heavy chain; m 94.6 2 6.7E-05 38.6 16.6 79 146-225 7-85 (191)
37 3ge3_A Toluene-4-monooxygenase 94.4 0.26 9E-06 51.2 11.6 139 162-307 95-248 (500)
38 3u52_A Phenol hydroxylase comp 94.2 0.34 1.1E-05 50.4 12.0 136 162-307 99-250 (511)
39 2vxx_A Starvation induced DNA 94.1 0.88 3E-05 40.4 13.0 122 161-294 30-162 (192)
40 1syy_A Ribonucleoside-diphosph 94.0 0.18 6.2E-06 49.3 9.1 148 154-307 69-244 (346)
41 2fzf_A Hypothetical protein; s 93.4 0.58 2E-05 40.5 10.4 131 162-306 23-163 (175)
42 3ge3_B Toluene-4-monooxygenase 93.4 1 3.5E-05 44.2 13.2 137 164-307 122-275 (327)
43 1ji5_A DLP-1; dodecamer, four- 92.8 0.82 2.8E-05 37.9 10.0 90 196-295 35-135 (142)
44 1za0_A Possible acyl-[acyl-car 92.2 0.53 1.8E-05 45.5 9.1 103 202-324 102-223 (275)
45 1mhy_B Methane monooxygenase h 92.1 0.55 1.9E-05 47.4 9.4 141 161-307 149-308 (395)
46 1o9i_A Pseudocatalase; oxidore 92.0 0.8 2.7E-05 44.1 10.1 134 162-304 24-192 (266)
47 2oh3_A Rubrerythrin, COG1633: 91.8 1.5 5.3E-05 37.7 10.8 115 168-296 14-141 (167)
48 1mty_B Methane monooxygenase h 91.5 0.46 1.6E-05 47.8 8.1 139 163-307 143-300 (384)
49 2c41_A DPS family DNA-binding 91.5 5.4 0.00018 33.9 13.8 121 161-294 12-143 (158)
50 2inc_B Toluene, O-xylene monoo 91.1 3.5 0.00012 40.2 13.8 148 167-323 121-285 (322)
51 2v8t_A Manganese-containing ps 90.9 1.1 3.6E-05 44.0 9.8 126 162-296 25-191 (302)
52 2rcc_A Ribonucleoside-diphosph 90.2 1.1 3.8E-05 43.7 9.3 106 202-308 114-238 (346)
53 1jig_A DLP-2; dodecamer, four- 90.1 2.2 7.6E-05 35.5 9.9 90 195-294 38-138 (146)
54 3ee4_A Probable ribonucleoside 89.2 2 6.9E-05 41.8 10.2 110 195-307 101-228 (323)
55 4di0_A Rubrerythrin; ssgcid, s 89.1 0.75 2.6E-05 39.9 6.4 117 162-295 15-133 (144)
56 1n1q_A DPS protein; four-helix 89.0 2.8 9.7E-05 35.1 9.8 91 195-295 41-142 (149)
57 2uw1_A Desaturase, plastid del 88.1 3.1 0.00011 41.3 10.8 105 202-323 113-238 (338)
58 3k6c_A Uncharacterized protein 87.7 0.5 1.7E-05 39.3 4.1 55 261-323 31-85 (95)
59 2d5k_A DPS, DPS family protein 86.7 3.9 0.00013 34.9 9.4 89 196-294 41-140 (156)
60 1zpy_A Hypothetical protein NE 86.0 1.4 4.7E-05 36.6 5.9 51 265-323 35-85 (95)
61 1yuz_A Nigerythrin; rubrythrin 86.0 20 0.00068 32.6 14.4 129 161-307 30-162 (202)
62 2o1z_A Ribonucleotide reductas 85.9 3.6 0.00012 39.7 9.7 100 202-305 124-240 (311)
63 2p1i_A Ribonucleotide reductas 85.8 2.4 8.1E-05 41.6 8.5 104 202-306 125-242 (349)
64 3n37_A Ribonucleoside-diphosph 84.7 4.5 0.00015 39.1 9.8 143 154-307 47-209 (319)
65 3dhz_A Ribonucleotide reductas 84.3 4.7 0.00016 39.2 9.8 142 155-307 58-219 (329)
66 1vjx_A Putative ferritin-like 84.3 5 0.00017 34.2 8.9 117 169-296 24-148 (157)
67 1z6o_A Ferritin light chain; m 83.0 23 0.00078 32.3 13.3 69 160-229 37-107 (212)
68 3pf7_A Benzoyl-COA oxygenase c 82.7 18 0.00062 37.4 13.5 124 161-306 110-256 (481)
69 3pwf_A Rubrerythrin; non heme 82.1 2.8 9.5E-05 37.4 6.6 115 163-307 10-126 (170)
70 3mjo_A Ribonucleotide reductas 81.6 4.4 0.00015 38.8 8.3 142 155-307 57-218 (296)
71 1h0o_A Ribonucleoside-diphosph 80.9 2.2 7.6E-05 42.7 6.1 145 155-306 120-283 (390)
72 1tjo_A Iron-rich DPSA-homolog 80.5 7.6 0.00026 34.1 8.8 85 198-294 65-163 (182)
73 2chp_A MRGA, metalloregulation 80.4 15 0.0005 31.4 10.4 83 200-294 50-145 (153)
74 1lko_A Rubrerythrin all-iron(I 80.1 20 0.00067 32.1 11.5 120 162-296 11-134 (191)
75 1mxr_A Ribonucleotide reductas 79.7 3.1 0.00011 41.0 6.7 139 155-306 65-254 (375)
76 3iq1_A DPS family protein; csg 79.6 7.8 0.00027 33.3 8.4 87 198-294 54-151 (159)
77 1jk0_B RNR Y4, ribonucleoside- 79.0 4.2 0.00014 39.8 7.3 147 153-306 72-236 (345)
78 1jk0_A RNR Y2, ribonucleoside- 78.6 5 0.00017 40.6 7.9 138 156-305 147-308 (419)
79 2fjc_A Antigen TPF1; mini ferr 78.2 7.2 0.00025 33.5 7.8 83 200-294 51-147 (156)
80 3kwo_A Putative bacterioferrit 78.0 8.7 0.0003 32.8 8.2 88 198-294 41-139 (152)
81 3chh_A P-aminobenzoate N-oxyge 77.7 48 0.0017 32.5 14.4 169 168-344 98-284 (336)
82 1o9r_A Agrobacterium tumefacie 77.0 9.6 0.00033 32.8 8.3 85 199-294 54-151 (162)
83 2yjk_A AFP, DPS; metal-binding 75.6 9.8 0.00034 32.8 7.9 83 200-294 58-152 (161)
84 2cf7_A DPR; peroxide resistanc 75.3 10 0.00034 33.0 8.0 83 200-294 55-152 (165)
85 3k6c_A Uncharacterized protein 75.1 7.1 0.00024 32.4 6.4 52 164-222 24-75 (95)
86 4eve_A Neutrophil-activating p 74.6 12 0.0004 32.7 8.2 85 198-294 58-156 (164)
87 2bk6_A Non-heme iron-containin 73.1 15 0.00052 31.3 8.4 83 200-294 46-143 (156)
88 2clb_A DPS-like protein; DI-ir 72.8 50 0.0017 29.1 12.8 127 161-305 27-167 (188)
89 4a58_A Ribonucleoside-diphosph 72.4 23 0.00078 34.3 10.5 141 154-306 63-226 (324)
90 2wlu_A DPS-like peroxide resis 72.1 13 0.00044 32.7 8.0 86 200-294 65-162 (175)
91 2c2u_A DPS, DNA-binding stress 71.7 15 0.0005 33.6 8.4 86 200-294 98-194 (207)
92 3olj_A Ribonucleoside-diphosph 71.1 21 0.00071 33.9 9.6 141 155-305 55-217 (286)
93 2hz8_A De novo designed DIIRON 68.9 13 0.00045 31.7 6.9 45 171-222 44-88 (115)
94 2xgw_A Peroxide resistance pro 68.4 16 0.00056 33.0 8.0 86 200-294 81-178 (199)
95 2pyb_A NAPA, neutrophil activa 67.4 5.8 0.0002 33.8 4.5 85 201-294 44-140 (151)
96 2oc5_A Hypothetical protein; D 64.5 77 0.0026 29.8 11.6 103 195-304 62-172 (244)
97 1zpy_A Hypothetical protein NE 63.5 18 0.0006 30.0 6.4 53 162-221 22-74 (95)
98 2c2j_A DNA-binding stress resp 61.2 28 0.00094 31.9 8.1 82 200-294 85-180 (211)
99 3hl1_A Ferritin like protein; 59.1 43 0.0015 32.9 9.5 66 155-224 6-71 (317)
100 3u52_C Phenol hydroxylase comp 58.2 46 0.0016 32.6 9.5 152 164-323 123-289 (333)
101 3ak8_A DNA protection during s 58.0 64 0.0022 27.8 9.6 80 200-294 66-159 (167)
102 3qhb_A Symerythrin, ORF180; fo 57.1 18 0.00062 32.7 6.0 121 161-295 26-166 (179)
103 2z90_A Starvation-inducible DN 56.8 40 0.0014 29.0 8.0 82 200-294 56-151 (161)
104 1rcw_A CT610, CADD; iron, DI-i 54.9 40 0.0014 29.7 7.9 136 160-306 41-194 (231)
105 4dr0_A Ribonucleoside-diphosph 53.1 60 0.002 31.8 9.4 140 154-307 67-236 (350)
106 2yw6_A DNA protection during s 52.9 93 0.0032 27.4 9.9 82 200-294 54-149 (183)
107 1vjx_A Putative ferritin-like 44.9 76 0.0026 26.7 7.8 54 162-221 103-156 (157)
108 4etr_A Putative uncharacterize 41.2 1.6E+02 0.0056 24.8 11.6 122 161-294 13-142 (153)
109 2fzf_A Hypothetical protein; s 37.5 1.1E+02 0.0039 25.8 7.8 67 160-236 106-172 (175)
110 3fse_A Two-domain protein cont 36.1 52 0.0018 32.5 6.0 86 196-288 241-331 (365)
111 2v8t_A Manganese-containing ps 35.0 1.2E+02 0.0041 29.6 8.2 66 161-232 145-212 (302)
112 1o9i_A Pseudocatalase; oxidore 34.2 70 0.0024 30.6 6.4 65 161-232 138-202 (266)
113 2oh3_A Rubrerythrin, COG1633: 30.8 1.7E+02 0.0057 24.7 7.7 55 162-222 96-150 (167)
114 2e0z_A Virus-like particle; ba 30.1 11 0.00037 37.3 0.0 56 163-224 23-78 (345)
115 1za0_A Possible acyl-[acyl-car 28.2 34 0.0012 32.9 3.0 22 200-221 182-203 (275)
116 3ez0_A Uncharacterized protein 27.5 47 0.0016 31.3 3.8 57 161-224 17-74 (225)
117 2e0z_A Virus-like particle; ba 24.9 15 0.00053 36.2 0.0 50 255-307 29-78 (345)
118 2hz8_A De novo designed DIIRON 24.4 76 0.0026 27.0 4.2 47 267-320 51-97 (115)
119 3q4o_A Uncharacterized protein 23.8 4.2E+02 0.015 24.2 15.1 154 147-321 17-187 (196)
120 3dde_A TENA/THI-4 protein, dom 22.6 4E+02 0.014 23.6 9.4 140 160-312 42-193 (239)
121 2ouf_A Hypothetical protein; s 21.2 73 0.0025 26.2 3.4 24 239-262 31-54 (94)
122 1jm0_A Protein (four-helix bun 21.0 39 0.0013 24.3 1.5 18 278-295 25-42 (50)
123 2uw1_A Desaturase, plastid del 20.4 57 0.002 32.3 3.0 19 201-219 198-216 (338)
No 1
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=97.23 E-value=0.016 Score=48.01 Aligned_cols=120 Identities=13% Similarity=0.065 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC----CCCCccchhhHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK----YGDMPAHDVLWN 236 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~----YGDlPaH~gLWe 236 (391)
+..|-..-..|+.|+....-..+.+.+. +++ ++..=|-+.+.||..|...+.+|+..+|.. .+.++. |
T Consensus 12 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~--~~~-~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~----~- 83 (149)
T 2qqy_A 12 IEGLNEDLAGEYSAIIMYNHNAATVSGI--YRQ-VLKPFFESEISDEQGHALYLAEKIKTLGGTPTTIPLRVKQ----A- 83 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCST--THH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCC----C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--ChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCCCCCC----C-
Confidence 4455555568999999988777777642 222 455556678999999999999999999864 121111 1
Q ss_pred HHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHh
Q 016349 237 QCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVA 295 (391)
Q Consensus 237 ~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa 295 (391)
.++..=|.. -+-.|......-..+++.....||..+.++|+.|+.||..|+.
T Consensus 84 ------~~~~e~l~~-~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~ 135 (149)
T 2qqy_A 84 ------EDVREMLEY-ARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHME 135 (149)
T ss_dssp ------SSHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ------CCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 111111111 1234443333334455566668999999999999999999984
No 2
>2inc_A Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 2ind_A* 1t0q_A 1t0r_A 1t0s_A 3n1z_A* 3rnf_A* 3n20_A* 3rnc_A 3rn9_A* 3n1x_A 3rne_A 2rdb_A* 3n1y_A* 3rnb_A 3rng_A 3rna_A
Probab=97.05 E-value=0.0024 Score=66.08 Aligned_cols=137 Identities=14% Similarity=0.007 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccc-------hhhHH
Q 016349 164 LHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAH-------DVLWN 236 (391)
Q Consensus 164 LHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH-------~gLWe 236 (391)
+=++.|.|+.|.--...+ .|+... ... ..--+..+.||.||..+..-++.+|+.....++.+ +-.|+
T Consensus 96 ~~~~~~~Ey~a~~~~a~~-~r~ap~--~~~---rnaaa~q~lDElRHaQ~~~~~~~el~~~~~~~~~f~~~~~~~~p~~~ 169 (491)
T 2inc_A 96 FGAIALEEYAASTAEARM-ARFAKA--PGN---RNMATFGMMDENRHGQIQLYFPYANVKRSRKWDWAHKAIHTNEWAAI 169 (491)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCSC--HHH---HHHHHHHHHHHHHHHHHHHHHHHTTGGGCGGGGHHHHGGGSCCHHHH
T ss_pred HhhhhHHHHHHHHHHHHH-HHhCCC--HHH---HHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhcccccHHHhhcCcccH
Confidence 346779999999876655 688742 111 11223466799999999999999988876655532 23344
Q ss_pred HHHhhh------hcHHHHHhhchhhHhhc--CCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHH
Q 016349 237 QCKKSS------DNVAARLAVIPLVQEAR--GLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 237 ~a~~T~------~dllaRlAvVp~vlEAR--GLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~ 307 (391)
.+.+.. +|...-+..+.+|+|.- +|=.. .+++--...||..+..|+.-|..||-.|++.|...++.++++
T Consensus 170 ~~R~~~ed~~~t~D~~E~~ialnlv~E~~~tnll~~-~f~~~Aa~nGD~lt~~v~~siq~DEaRH~~~g~~ll~~ll~d 247 (491)
T 2inc_A 170 AARSFFDDMMMTRDSVAVSIMLTFAFETGFTNMQFL-GLAADAAEAGDHTFASLISSIQTDESRHAQQGGPSLKILVEN 247 (491)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHCCCCCCCTTHHHHHH-HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHT
T ss_pred HHHHHHHHhhccccHHHHHHHHHHHHHHHhHHHHHH-HHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 433332 45566666667777651 01001 134455578999999999999999999999999999999987
No 3
>3uno_A Probable bacterioferritin BFRB; ferroxidase activity, iron storage, oxidoreductase; 2.50A {Mycobacterium tuberculosis} PDB: 3oj5_A 3qd8_A
Probab=97.02 E-value=0.0041 Score=56.39 Aligned_cols=136 Identities=18% Similarity=0.131 Sum_probs=90.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccchhhHHH
Q 016349 160 NAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHDVLWNQ 237 (391)
Q Consensus 160 ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~gLWe~ 237 (391)
-...|-...+.|+.|++..+-..+=|.+. ++| +|-.=|.+.|.||-.|...+.+|+..+|.. +.+++.-..=|..
T Consensus 11 v~~~LN~qi~~El~As~~Yl~~a~~f~~~--~l~-g~a~~f~~~A~EE~~HA~~l~~~i~~rGG~~~l~~i~~p~~~~~s 87 (189)
T 3uno_A 11 FHALMQEQIHNEFTAAQQYVAIAVYFDSE--DLP-QLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDR 87 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccC--ChH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCCCCccchH
Confidence 36788889999999999988776666542 343 555555678999999999999999999975 4444333222432
Q ss_pred HHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 238 CKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 238 a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
..+.-. .-+.+|..--..-..+++.-...||..+.+.|+-|++||+.|+..=...+..++.
T Consensus 88 ~~e~le--------~aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~fL~EQve~~~~l~~~l~~l~~ 148 (189)
T 3uno_A 88 PREALA--------LALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADR 148 (189)
T ss_dssp HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--------HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221110 1123333322222235555667899999999999999999999765555555554
No 4
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=96.98 E-value=0.012 Score=49.41 Aligned_cols=132 Identities=19% Similarity=0.093 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhhHHHHHh
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVLWNQCKK 240 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gLWe~a~~ 240 (391)
+..|-..-..|+.|+....-..+.|.+. ++| ++..=|-+.+.+|..|...+.+|+..+|.. |.-..+ ....
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~--~~~-~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~----p~~~~~-~~~~- 78 (158)
T 2y3q_A 8 INYLNKLLGNELVAINQYFLHARMFKNW--GLK-RLNDVEYHESIDEMKHADRYIERILFLEGL----PNLQDL-GKLN- 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----CCCSCC-CCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc--CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----CcCCCC-CcCC-
Confidence 4455555678999999988777777542 343 566666779999999999999999999864 111100 0000
Q ss_pred hhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHH
Q 016349 241 SSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFL 302 (391)
Q Consensus 241 T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~ 302 (391)
...++..=|. .-+-.|......=..+++.....||..+.++|+.|..||..|+..=..++.
T Consensus 79 ~~~~~~e~l~-~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~ 139 (158)
T 2y3q_A 79 IGEDVEEMLR-SDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELD 139 (158)
T ss_dssp CCSSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012221111 122445554444445666666679999999999999999999754333333
No 5
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=96.91 E-value=0.006 Score=52.65 Aligned_cols=130 Identities=14% Similarity=0.115 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHDVLWNQC 238 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~gLWe~a 238 (391)
+-+|-..-..|+.|++..+-...-|.+. ++ .+|..=|.+.|.||-.|...+.+|+..+|.. +++++... .|+
T Consensus 8 i~~LN~~l~~El~A~~~Y~~~a~~~~~~--g~-~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~~~-~~~-- 81 (159)
T 4am5_A 8 IEYLNRGLRSELTAVSQYWLHYRMLEDW--GY-KDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDPLR-IGQ-- 81 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--TC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCC-CCS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC--Cc-HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccccc-cch--
Confidence 4556555668999999977554444321 12 2455556678999999999999999999975 33333221 122
Q ss_pred HhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 239 KKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
++..=+.. -+-+|....+.=+.+++-....||..++++|+.|+.||..|+ .||....+
T Consensus 82 -----~~~e~l~~-~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~il~eEeeH~----~~l~~~L~ 139 (159)
T 4am5_A 82 -----TVKEVLES-DLAAEREARALYQEGAAYAASVGDFPSKNLFEELMGDEEHHI----DFLETQLD 139 (159)
T ss_dssp -----SHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH----HHHHHHHH
T ss_pred -----hHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 22111111 123444444444556777788999999999999999999998 56655433
No 6
>1eum_A Ferritin 1; ECFTNA, metal binding protein; 2.05A {Escherichia coli} SCOP: a.25.1.1
Probab=96.87 E-value=0.0045 Score=54.05 Aligned_cols=133 Identities=14% Similarity=0.023 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHDVLWNQC 238 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~gLWe~a 238 (391)
...|....+.|+.|+...+-...=|.+ .++| +|-.=|.+.|.||-.|...+.+++..+|.. +.+++.-..-|...
T Consensus 7 ~~~LN~~i~~El~A~~~Yl~~a~~~~~--~gl~-~~a~~f~~~a~eE~~HA~~l~~~i~~~gg~~~l~~i~~p~~~~~~~ 83 (165)
T 1eum_A 7 IEKLNEQMNLELYSSLLYQQMSAWCSY--HTFE-GAAAFLRRHAQEEMTHMQRLFDYLTDTGNLPRINTVESPFAEYSSL 83 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCCH
Confidence 567888889999999998766555543 2354 455555678999999999999999999987 23322222123211
Q ss_pred HhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHH
Q 016349 239 KKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~l 304 (391)
. +.+ .. -+.+|..-...-+.+++.-...||..++..|+-+++||+.|++.=...+..+
T Consensus 84 ~----e~l-~~---al~~E~~~~~~~~~l~~~a~~~~D~~~~~fl~~~l~eq~e~~~~l~~~l~~l 141 (165)
T 1eum_A 84 D----ELF-QE---TYKHEQLITQKINELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKL 141 (165)
T ss_dssp H----HHH-HH---HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H----HHH-HH---HHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 11 1233444333345677777788999999999999999999997544444444
No 7
>1rcd_A L ferritin; iron storage; 2.00A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 1rcg_A 1rci_A 1rcc_A 1rce_A
Probab=96.84 E-value=0.0088 Score=52.93 Aligned_cols=137 Identities=12% Similarity=0.031 Sum_probs=88.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccc-hhhH
Q 016349 159 LNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAH-DVLW 235 (391)
Q Consensus 159 ~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH-~gLW 235 (391)
.-...|....+.|+.|+...+-...=|.+..-++| +|..=|.+.|.||-.|...+.+|+..+|.. +.+++.- ..=|
T Consensus 12 ~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~-g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~~ 90 (173)
T 1rcd_A 12 DCEAGLNRTVNLKFHSSYVYLSMASYFNRDDVALS-NFAKFFRERSEEEKEHAEKLIEYQNQRGGRVFLQSVEKPERDDW 90 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcccc
Confidence 44788999999999999998877666654211343 555555678999999999999999999976 4555432 1112
Q ss_pred HHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHH-HHHHhHhhhHhhhhHHHHHH
Q 016349 236 NQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVA-RIADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 236 e~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~-iI~~DEI~HVa~G~rWF~~l 304 (391)
....+. + -.-+.+|..-...--.+++.-...+|..+...|+ -|++||+.|++.=...+..+
T Consensus 91 ~~~~e~----l----e~aL~~E~~v~~~l~~l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l 152 (173)
T 1rcd_A 91 ANGLEA----L----QTALKLQKSVNQALLDLHAVAADKSDPHMTDFLESPYLSESVETIKKLGDHITSL 152 (173)
T ss_dssp CSHHHH----H----HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHH----H----HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111110 0 0112333332222233555556779999999999 99999999995433333333
No 8
>3qz3_A Ferritin; structural genomics, the center for structural genomics of I diseases, csgid, cytoplasmic, oxidoreductase; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: a.25.1.1
Probab=96.83 E-value=0.01 Score=53.25 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=93.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccchhhHH
Q 016349 159 LNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHDVLWN 236 (391)
Q Consensus 159 ~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~gLWe 236 (391)
.-...|....+.||.|+...+-..+=|.+. ++| +|-.=|.+.|.||-.|...+.+|+..+|.. +.+++.-..-|.
T Consensus 14 ~v~~~LN~qin~EL~as~~Yl~~a~~f~~~--~l~-g~a~~f~~~a~EE~~HA~~l~~~i~~~Gg~~~l~~i~~p~~~~~ 90 (184)
T 3qz3_A 14 AMVEHLNEQINLEFFSSNLYLQMSAWCEDK--GFD-GAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAPRHDFA 90 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--ChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcccCCCCCcccCcC
Confidence 346788889999999999988766666532 233 455555678999999999999999999975 556655544453
Q ss_pred HHHhhh-hcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHH
Q 016349 237 QCKKSS-DNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 237 ~a~~T~-~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~ 307 (391)
...+.- .++..=..+..... .+++.....+|..+.+.|+-+++|++.|+..=...+..++.-
T Consensus 91 ~~~e~le~aL~~Ek~v~~~l~---------~l~~la~~~~D~~t~~fLe~fl~EQve~~~~l~~~l~~l~~~ 153 (184)
T 3qz3_A 91 SLGEVFRETYQHEQKITQQIN---------KLAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKLELV 153 (184)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 322211 11111222222222 345555678999999999999999999997766666666553
No 9
>1krq_A Ferritin; H-chain like four-helix bundle, binding protein; 2.70A {Campylobacter jejuni} SCOP: a.25.1.1
Probab=96.82 E-value=0.0038 Score=54.71 Aligned_cols=133 Identities=16% Similarity=0.052 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC--CCCccchhhHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY--GDMPAHDVLWNQC 238 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y--GDlPaH~gLWe~a 238 (391)
...|....+.|++|+...+-...=|.+ .++| +|-.=|.+.|.||-.|...+.+++..+|..- .+++.-..-|...
T Consensus 7 ~~~Ln~~i~~El~A~~~Yl~~a~~~~~--~gl~-~~a~~f~~~a~eE~~HA~~l~~~i~~~gG~~~l~~i~~p~~~~~~~ 83 (167)
T 1krq_A 7 VKLLNEQINKEMYAANLYLSMSSWCYE--NSLD-GAGAFLFAHASEESDHAKKLITYLNETDSHVELQEVKQPEQNFKSL 83 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCCCCCCCCCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhH--cCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCcCCH
Confidence 567778889999999998766555543 2354 3555556689999999999999999999873 3333222223211
Q ss_pred HhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHH
Q 016349 239 KKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~l 304 (391)
. +.+ . .-+.+|..-.+.-+.+++.-...||..+...|+-++.||+.|+..=...+..+
T Consensus 84 ~----e~l-~---~al~~E~~~~~~~~~l~~~a~~~~D~~~~~~l~~~l~Eq~e~~~~l~~~l~~l 141 (167)
T 1krq_A 84 L----DVF-E---KTYEHEQFITKSINTLVEHMLTHKDYSTFNFLQWYVSEQHEEEALFRGIVDKI 141 (167)
T ss_dssp H----HHH-H---HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred H----HHH-H---HHHHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 1 11234444444445677777788999999999999999999986433333333
No 10
>1s3q_A Ferritin; ferroxidase, four helix bundle, iron storage, metal binding; 2.10A {Archaeoglobus fulgidus} SCOP: a.25.1.1 PDB: 1sq3_A 3kx9_A
Probab=96.80 E-value=0.0045 Score=54.93 Aligned_cols=137 Identities=14% Similarity=0.025 Sum_probs=90.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC--CCCccchh----
Q 016349 160 NAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY--GDMPAHDV---- 233 (391)
Q Consensus 160 ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y--GDlPaH~g---- 233 (391)
-...|....+.|+.|+...+-..+=|.+. ++| +|-.=|-+.|.||-.|...+.+|+..+|..- .+++.-..
T Consensus 8 v~~~LN~qi~~El~as~~Yl~~a~~~~~~--~l~-g~a~~f~~~a~EE~~HA~~l~~~i~~~gg~~~l~~i~~p~~~~~~ 84 (173)
T 1s3q_A 8 MVEALNRQINAEIYSAYLYLSMASYFDSI--GLK-GFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSEWDS 84 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHc--ChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCCC
Confidence 46778889999999999988666556542 354 4555566789999999999999999999873 44432121
Q ss_pred hHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHcCCCc
Q 016349 234 LWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKMKRAP 312 (391)
Q Consensus 234 LWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~g~dp 312 (391)
+-++.+. + +.+|..-...--.+++.-...+|..+...|+-|+.||+.|++.=...+..+.. .|.++
T Consensus 85 ~~e~le~---a---------L~~E~~v~~~~~~l~~~a~~~~D~~t~~fle~~l~eq~e~~~~l~~~l~~l~~-~g~~~ 150 (173)
T 1s3q_A 85 PLAAFEH---V---------YEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRL-IGEDK 150 (173)
T ss_dssp HHHHHHH---H---------HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTCH
T ss_pred HHHHHHH---H---------HHHHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCc
Confidence 2222221 1 22333322222235555666799999999999999999999755555555532 35444
No 11
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=96.79 E-value=0.062 Score=44.66 Aligned_cols=129 Identities=18% Similarity=0.098 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC-----CCCccchhhH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY-----GDMPAHDVLW 235 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y-----GDlPaH~gLW 235 (391)
...|-..-..|+.|+....-..+.+.+. ++ .++..=|.+.+.||..|...+.+|+..+|..- ..++..
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~--~~-~~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~---- 80 (155)
T 2fkz_A 8 IQHLNKILGNELIAINQYFLHARMYEDW--GL-EKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLIG---- 80 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--Ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCC----
Confidence 4556566668999999877666666431 12 22333344899999999999999999998651 111111
Q ss_pred HHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHH
Q 016349 236 NQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 236 e~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~l 304 (391)
.++..=|. .-+-+|......-..+++.....||..++++|+.|..||..|+..=...+..+
T Consensus 81 -------~~~~e~l~-~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i 141 (155)
T 2fkz_A 81 -------EHTKEMLE-CDLKLEQAGLPDLKAAIAYCESVGDYASRELLEDILESEEDHIDWLETQLDLI 141 (155)
T ss_dssp -------SSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12211111 11234444444445566666777999999999999999999986554554444
No 12
>2cih_A Ferritin heavy chain; apoferritin, ferroxidase, DI-iron non-heme protein, iron storage, iron, metal-binding, oxidoreductase, phosphorylation; 1.5A {Homo sapiens} PDB: 2chi_A 2cei_A 1fha_A 2fha_A 2cn7_A 2iu2_A 2clu_A 2cn6_A 3ajo_A 3ajq_A 3ajp_A 3erz_A 3es3_A 2z6m_A 1r03_A
Probab=96.67 E-value=0.015 Score=52.03 Aligned_cols=141 Identities=13% Similarity=0.058 Sum_probs=90.6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccch
Q 016349 155 SGLPLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHD 232 (391)
Q Consensus 155 ~~~~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~ 232 (391)
...+.-...|....+.||.|+...+-...=|.+..-++| +|..=+-+.+.||-.|...+.+++..+|.. +.+++.-.
T Consensus 12 ~~~~~~~~~LN~qi~~El~As~~Yl~~a~~~~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~ 90 (183)
T 2cih_A 12 NYHQDSEAAINRQINLDLYASYVYLSMSYYFDRDDVALK-NFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIQKPD 90 (183)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccccCCCCCCC
Confidence 334455788999999999999998877666764211343 455555568999999999999999999975 45554331
Q ss_pred -hhHHHHHhhh-hcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHH-HHHHhHhhhHhhhhHHHHHHH
Q 016349 233 -VLWNQCKKSS-DNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVA-RIADEEVAHVAVGVHWFLSVC 305 (391)
Q Consensus 233 -gLWe~a~~T~-~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~-iI~~DEI~HVa~G~rWF~~lC 305 (391)
+-|....+.- .+| -+|..-...--.+++.-...+|..+...|+ -+++||+.|++.=...+..+.
T Consensus 91 ~~~~~~~~e~le~aL---------~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~fl~eq~e~~~~l~~~l~~l~ 157 (183)
T 2cih_A 91 CDDWESGLNAMECAL---------HLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVKAIKELGDHVTNLR 157 (183)
T ss_dssp CSCCCSHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHH---------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2232211110 111 223221111123445556679999999999 699999999865444444443
No 13
>3e6s_A Ferritin; iron storage, ferroxidase, oxidoreductase; 1.95A {Pseudo-nitzschia multiseries} SCOP: a.25.1.1 PDB: 3e6r_A
Probab=96.65 E-value=0.0097 Score=52.74 Aligned_cols=144 Identities=13% Similarity=0.049 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccch--hhHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHD--VLWN 236 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~--gLWe 236 (391)
...|....+.|+.|++..+-..+=|.+. ++| +|-.=|.+.|.||-.|...+.+++..+|.. +.+++.-. .-|.
T Consensus 6 ~~~LN~qin~El~As~~Yl~ma~~f~~~--~l~-g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~~~~ 82 (168)
T 3e6s_A 6 LDLFNRQVTQEFTASQVYLSASIWFDQN--DWE-GMAAYMLAESAEEREHGLGFVDFANKRNIPIELQAVPAPVSCAEWS 82 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCGGGTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCcC--Cch-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcCCCCccccCC
Confidence 5678889999999999988776666542 353 555556678999999999999999999974 66776664 4564
Q ss_pred HHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHcCCCchHHH
Q 016349 237 QCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKMKRAPCSTF 316 (391)
Q Consensus 237 ~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~g~dp~~tf 316 (391)
...+.-.. -+-+|..--..--.+++--...+|..+.+.|+-++.|++.|++.=...+..+. .-|.+|..-|
T Consensus 83 ~~~e~le~--------aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~fl~eQve~~~~l~~~l~~l~-~~g~~~~~l~ 153 (168)
T 3e6s_A 83 SPEDVWQS--------ILELEQANTRSLLNLAEAASTCHDFAVMAFLNPFHLQQVNEEDKIGSILAKVT-DENRTPGLLR 153 (168)
T ss_dssp SHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTSTTHHH
T ss_pred CHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCcCeee
Confidence 43322111 12233321111122444445689999999999999999999965434444443 2355554433
No 14
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=96.53 E-value=0.038 Score=47.61 Aligned_cols=132 Identities=14% Similarity=0.035 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC--CCCccchhhHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY--GDMPAHDVLWNQC 238 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y--GDlPaH~gLWe~a 238 (391)
+..|-..-..|+.|+...+-..+.|.+. ++| ++-.=|-..|.+|..|...+.+|+..+|..- .+++.-.. |.
T Consensus 10 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~--~~~-~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~i~~~~~-~~-- 83 (174)
T 3qb9_A 10 LRLLNEQLTSELTAINQYFLHSKMQDNW--GFT-ELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRI-GQ-- 83 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCC-CS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC--ChH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCCCCCCC-CC--
Confidence 4555555578999999987777777541 344 4555556689999999999999999998541 11111111 21
Q ss_pred HhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHH
Q 016349 239 KKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~l 304 (391)
++..=|.. -+-.|....+.=..+++.-...||..+.++|+.|+.||..|+..=..++..+
T Consensus 84 -----~~~e~l~~-al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~l~eEe~h~~~l~~~l~~i 143 (174)
T 3qb9_A 84 -----TLREQFEA-DLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELM 143 (174)
T ss_dssp -----SHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111111 2244544444444456566778999999999999999999986544445444
No 15
>2v2p_A Ferritin light chain; metal transport, iron, haemin, apoferritin, iron storage, metal-binding; 1.15A {Equus caballus} PDB: 2v2r_A 2v2m_A 2v2l_A 2v2s_A 2v2o_A 2v2n_A 2za6_A 2v2j_A 2v2i_A 2z5p_A 1dat_A 2g4h_A 1aew_A 3h7g_A 2zg9_X 2zg8_X 3fi6_A 3o7r_A 2w0o_A 1hrs_A* ...
Probab=96.51 E-value=0.037 Score=48.91 Aligned_cols=134 Identities=16% Similarity=0.065 Sum_probs=88.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccc--hh
Q 016349 158 PLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAH--DV 233 (391)
Q Consensus 158 ~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH--~g 233 (391)
+.-...|....+.|+.|+...+-...=|.+..-++| +|-.=+.+.|.||-.|...+.+++..+|.. +.+++.- .+
T Consensus 10 ~~v~~~LN~qi~~El~as~~Yl~~a~~~~~~~~~l~-g~a~~f~~~s~EE~~HA~~l~~~i~~rgg~~~l~~i~~p~~~~ 88 (174)
T 2v2p_A 10 TEVEAAVNRLVNLYLRASYTYLSLGFYFDRDDVALE-GVCHFFRQLAQQKMQGAERLLKMQNQRGGRALFQDLQKPSQDE 88 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCccc
Confidence 344778999999999999998877666664211243 455555568899999999999999999986 4555432 22
Q ss_pred ---hHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHH-HHHhHhhhHhhhhHHHHHH
Q 016349 234 ---LWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVAR-IADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 234 ---LWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~i-I~~DEI~HVa~G~rWF~~l 304 (391)
+-++.+. + +.+|..-...--.+++.-...+|..+...|+- +++||+.|++.=...+..+
T Consensus 89 ~~~~~e~le~---a---------L~~Ek~v~~~l~~l~~~a~~~~D~~t~~fLe~~~l~eq~e~~~~l~~~l~~l 151 (174)
T 2v2p_A 89 WGTTPDAMKA---A---------IVLEKSLNQALLDLHALGSAQADPHLCDFLESHFLDEEVKLIKKMGDHLTNI 151 (174)
T ss_dssp CCSHHHHHHH---H---------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHH---H---------HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222211 1 23333322222235555566799999999998 9999999976544444444
No 16
>3ka8_A Ferritin, middle subunit; iron storage, DIIRON, iron, metal-binding, oxidoreductase; 1.35A {Rana catesbeiana} SCOP: a.25.1.1 PDB: 3ka9_A 3ka3_A 1mfr_A 3ka4_A 3rbc_A 3re7_A 3rgd_A 4das_A* 3ka6_A 3shx_A 3sh6_A 3se1_A 1bg7_A
Probab=96.48 E-value=0.025 Score=50.35 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=91.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccc-hhh
Q 016349 158 PLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAH-DVL 234 (391)
Q Consensus 158 ~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH-~gL 234 (391)
+.-...|....+.|+.|+++.+-..+=|....-++| +|-.=|.+.|.||-.|...+.+++..+|.. +.+++.- .+=
T Consensus 11 ~~v~~~LN~qin~El~As~~Yl~ma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~~i~~rgg~~~l~~i~~p~~~~ 89 (176)
T 3ka8_A 11 SDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALH-NVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKPERDE 89 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCcccCCCccc
Confidence 345778889999999999999877777762111243 455555678899999999999999999964 5565544 332
Q ss_pred HHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHH-HHHhHhhhHhhhhHHHHHHHHH
Q 016349 235 WNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVAR-IADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 235 We~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~i-I~~DEI~HVa~G~rWF~~lC~~ 307 (391)
|....+.-.. -+.+|..--..--.+++--...+|..+.+.|+- +++|++.|++.=...+..++.-
T Consensus 90 ~~~~~e~le~--------aL~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~~fl~eQve~~~~l~~~l~~l~~~ 155 (176)
T 3ka8_A 90 WGNTLEAMQA--------ALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVKHIKRIGDFITNLKRL 155 (176)
T ss_dssp CCSHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4322211100 012222211111123444456799999999995 9999999997666666666543
No 17
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=96.45 E-value=0.039 Score=47.88 Aligned_cols=129 Identities=22% Similarity=0.217 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC--CCCc-cchhhHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY--GDMP-AHDVLWNQ 237 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y--GDlP-aH~gLWe~ 237 (391)
+..|-..-..|+.|+....-..+.|.+. ++| ++..=|-+.|.+|..|...+.+|+..+|..- .++. +..+
T Consensus 13 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~--~~~-~l~~~f~~~a~eE~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~---- 85 (179)
T 1nfv_A 13 IEVLNKARAMELHAIHQYMNQHYSLDDM--DYG-ELAANMKLIAIDEMRHAENFAERIKELGGEPTTQKEGKVVTG---- 85 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TBH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSSCCCCS----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC--CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcCCCCCcCCCC----
Confidence 4455555668999999888777777541 233 4555566789999999999999999998651 1110 0001
Q ss_pred HHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 238 CKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 238 a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
.++..=|. .-+-.|....+.=..+++.....||..+.++|+.|..||..|+. ||+.+..
T Consensus 86 -----~~~~e~l~-~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~~~eEe~h~~----~l~~~l~ 144 (179)
T 1nfv_A 86 -----QAVPVIYE-SDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLT----YYENIGS 144 (179)
T ss_dssp -----CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred -----CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 12221111 11245555455455566666678999999999999999999984 5554443
No 18
>2vzb_A Putative bacterioferritin-related protein; DPS, DPSL, iron, oxidative stress, metal transport; 2.30A {Bacteroides fragilis}
Probab=96.38 E-value=0.066 Score=45.51 Aligned_cols=133 Identities=16% Similarity=0.103 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccch-hhHHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHD-VLWNQCK 239 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~-gLWe~a~ 239 (391)
+..|-..-..|+.|+....-..+-|.+. +++ ++..=+-+.+.+|..|...+.+|+..+|.. .+.-. .+.+.+.
T Consensus 19 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~--~~~-~l~~~f~~~a~ee~~Had~lae~i~~lGg~---p~~~~~~~~~~~~ 92 (170)
T 2vzb_A 19 IDQLNAALSEEWLAYYQYWVGALVVEGA--MRA-DVQGEFEEHAEEERHHAQLIADRIIELEGV---PVLDPKKWFELAR 92 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCBST--THH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCC---CCCCGGGHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCc---cCCCHHHHHHhhc
Confidence 5667777788999999988777777652 233 555666778999999999999999999954 22211 2222210
Q ss_pred -----hhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHH
Q 016349 240 -----KSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWF 301 (391)
Q Consensus 240 -----~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF 301 (391)
....++..=|.. -+-.|....+.-..+++..... |..++++|+.|..||..|+..=...+
T Consensus 93 ~~~~~~~~~~~~e~l~~-~l~~E~~~~~~~~~~~~~a~~~-D~~t~~~l~~~~~ee~~h~~~l~~~l 157 (170)
T 2vzb_A 93 CKYDSPTAFDSVSLLNQ-NVSSERCAILRYQEIANFTNGK-DYTTCDIAKHILAEEEEHEQDLQDYL 157 (170)
T ss_dssp SCCCCCCSCBHHHHHHH-HHHHHHHHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000122111111 1133443333333344444344 99999999999999999986433333
No 19
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein complex, ferritin-like fold, bacterial multi monooxygenase, structural genomics; HET: 3HC; 2.03A {Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C* 3pwq_C
Probab=96.30 E-value=0.0011 Score=64.95 Aligned_cols=133 Identities=17% Similarity=0.139 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCC--ccchh----
Q 016349 160 NAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDM--PAHDV---- 233 (391)
Q Consensus 160 ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDl--PaH~g---- 233 (391)
-+.+|-.+||=|+-+..---+-+- -.+ .|...- =.+.++.||..|+.++..+|.+||.+=-++ +.+++
T Consensus 33 L~~ll~~laD~ELi~~~rl~ew~~-~AP---~Lee~i--ALa~ia~DE~GHa~~l~~~a~~lG~d~d~l~~~~r~~~~~~ 106 (311)
T 3pvt_A 33 LIRQIGQHAHSEIVGMLPEGNWIT-RAP---TLRRKA--ILLAKVQDEAGHGLYLYSAAETLGCAREDIYQKMLDGRMKY 106 (311)
T ss_dssp HHHHHHHHHHHHHHTHHHHHTTGG-GCS---SHHHHH--HHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHh-hCC---CHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhcchhhh
Confidence 356677778878776543222222 222 232222 467899999999999999999998631000 01111
Q ss_pred --hHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 234 --LWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 234 --LWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
|++. ...|-. -.-+...++.+-+.+ ....|....|..-+.|+..|+.||--|+..|..|++.+|+
T Consensus 107 ~~lfe~---P~~dWa-d~vvr~~l~D~~a~~----~~~~L~~ss~~plA~~a~ki~kEE~yH~~~g~~wv~rL~~ 173 (311)
T 3pvt_A 107 SSIFNY---PTLSWA-DIGVIGWLVDGAAIV----NQVALCRTSYGPYARAMVKICKEESFHQRQGFEACMALAQ 173 (311)
T ss_dssp CGGGGS---CCCSHH-HHHHHHHHHHHHHHH----HHHTTTTCSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHhC---CCCCHH-HHHHHHHHHHHHHHH----HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1110 001111 111112222222221 3345566778888999999999999999999999999996
No 20
>3a68_A Sferh-4, ferritin-4, chloroplastic; 4-helix bundle, iron storage, CAGE-like protein, plant, iron, metal-binding, oxidoreductase, plastid; 1.80A {Glycine max} PDB: 3a9q_A
Probab=96.28 E-value=0.29 Score=44.95 Aligned_cols=127 Identities=14% Similarity=0.062 Sum_probs=84.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccch--
Q 016349 157 LPLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHD-- 232 (391)
Q Consensus 157 ~~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~-- 232 (391)
.+.-...|....+.||.|+.+.+-..+=|.+..-++| .|..=|-+.+.||-.|...+.+++..+|.. +.+++.-.
T Consensus 42 ~~~v~~~LN~qin~El~As~~Yl~ma~~f~~~~v~l~-g~a~~f~~~s~EE~~HA~kl~~yi~~rGG~~~l~~i~~p~~~ 120 (212)
T 3a68_A 42 VDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALR-GLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSD 120 (212)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCBCCCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCcCCCCCC
Confidence 3445788999999999999998877766764211343 455555568899999999999999999976 44544321
Q ss_pred -------hhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHH-HHHHhHhhhHhh
Q 016349 233 -------VLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVA-RIADEEVAHVAV 296 (391)
Q Consensus 233 -------gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~-iI~~DEI~HVa~ 296 (391)
..-++.+. +| -+|..-...--.+++.-...+|..+.+.|+ -+++||+.|++.
T Consensus 121 ~~~~e~~~~~e~le~---aL---------~~Ek~v~~~l~~l~~~A~~~~D~~t~~fLe~~fL~EQve~~~~ 180 (212)
T 3a68_A 121 FDHADKGDALHAMEL---AL---------SLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKR 180 (212)
T ss_dssp CCCTTTCHHHHHHHH---HH---------HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCCcccCCHHHHHHH---HH---------HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 11122111 11 222221111122444555679999999999 999999999943
No 21
>2jd6_0 Ferritin homolog, ferritin; metal transport, iron, pores, archaeon, entry channels, thermostability, hyperthermophIle, ferroxidase center; 2.75A {Pyrococcus furiosus} PDB: 2jd7_0 2jd8_0 2x17_0
Probab=96.24 E-value=0.04 Score=47.80 Aligned_cols=125 Identities=18% Similarity=0.103 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHDVLWNQC 238 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~gLWe~a 238 (391)
+..|-...+.|+.|+.+.+-..+=|.+ .+++ +|..=|-+.+.+|..|...+.+|+..+|.. +.+++....-|...
T Consensus 7 ~~~Ln~~l~~El~a~~~Yl~~a~~~~~--~~~~-~l~~~f~~~a~ee~~had~laeri~~lGg~p~~~~i~~~~~~~~~~ 83 (174)
T 2jd6_0 7 LKALNDQLNRELYSAYLYFAMAAYFED--LGLE-GFANWMKAQAEEEIGHALRFYNYIYDRNGRVELDEIPKPPKEWESP 83 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--CCch-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCCCCcCcCCH
Confidence 456777778899999987655444432 1222 355555678999999999999999999987 23333222223211
Q ss_pred HhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhh
Q 016349 239 KKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAV 296 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~ 296 (391)
.+.-... +-+|......-..+++.-...||..++++|+.|+.||+.|+..
T Consensus 84 ~e~l~~~--------l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~l~eq~e~~~~ 133 (174)
T 2jd6_0 84 LKAFEAA--------YEHEKFISKSIYELAALAEEEKDYSTRAFLEWFINEQVEEEAS 133 (174)
T ss_dssp HHHHHHH--------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHH--------HHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHH
Confidence 1111111 1233332222344566666789999999999999999999864
No 22
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=96.16 E-value=0.067 Score=44.97 Aligned_cols=131 Identities=17% Similarity=0.062 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCC--CCc-cchhhHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYG--DMP-AHDVLWNQ 237 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YG--DlP-aH~gLWe~ 237 (391)
+..|-..-..|+.|+....-..+.|.+. ++ .++..=|-+.+.+|..|...+.+|+..+|..-- .++ +..+
T Consensus 8 ~~~Ln~~l~~E~~a~~~Y~~~a~~~~~~--~~-~~l~~~f~~~a~ee~~Ha~~l~e~i~~lgg~p~~~~~~~~~~~---- 80 (161)
T 1jgc_A 8 IEFLNAALRSELTAISQYWVHFRLQEDW--GL-AKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRIG---- 80 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCCCCCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC--Cc-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCCCcCCCC----
Confidence 4455555568999999887777777531 22 234444566899999999999999999996411 111 1111
Q ss_pred HHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHH
Q 016349 238 CKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 238 a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~l 304 (391)
.++..=|. .-+-.|....+.=..+++.....||..++++|+.|+.||..|+..=..++..+
T Consensus 81 -----~~~~e~l~-~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l 141 (161)
T 1jgc_A 81 -----EGPRETLE-CDLAGEHDALKLYREARDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISLY 141 (161)
T ss_dssp -----SSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12111111 11244544444444455555666999999999999999999997655555554
No 23
>3oj5_A Ferritin family protein; ferroxidase, cytosol, oxidoreductase; 2.85A {Mycobacterium tuberculosis} PDB: 3qd8_A
Probab=96.14 E-value=0.023 Score=50.47 Aligned_cols=133 Identities=19% Similarity=0.166 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccchhhHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHDVLWNQC 238 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~gLWe~a 238 (391)
+..|-....-|+.|+.+.+-..+=|.. .+++ +|..=|-+.+.||..|...+.+|+..+|.. +.+++.-..-|...
T Consensus 12 ~~~LN~~la~El~a~~~Yl~~a~~~~~--~gf~-~l~~~f~~~a~ee~~Had~laeri~~lGg~p~~~~i~~~~~~~~~~ 88 (189)
T 3oj5_A 12 HALMQEQIHNEFTAAQQYVAIAVYFDS--EDLP-QLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRP 88 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc--CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCCCCCCH
Confidence 566777778899999987755443422 1232 455556678999999999999999999987 23322222223111
Q ss_pred HhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHH
Q 016349 239 KKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~l 304 (391)
.+ .+. . -+-.|..-.+.-..+++.....||..++++|+-|+.||+.|+..=...+..+
T Consensus 89 ~e----~l~---~-~l~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~~l~eqe~~~~~l~~~l~~l 146 (189)
T 3oj5_A 89 RE----ALA---L-ALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVA 146 (189)
T ss_dssp HH----HHH---H-HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH----HHH---H-HHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 110 0 1123333333334456666778999999999999999999986533444333
No 24
>3bvf_A Ferritin; iron storage, metal-binding, oxidoreductase; 1.50A {Helicobacter pylori} PDB: 3bve_A 3bvi_A 3bvk_A 3bvl_A 3egm_A
Probab=96.00 E-value=0.029 Score=49.81 Aligned_cols=126 Identities=15% Similarity=0.060 Sum_probs=84.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC--CCCccchhhHH
Q 016349 159 LNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY--GDMPAHDVLWN 236 (391)
Q Consensus 159 ~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y--GDlPaH~gLWe 236 (391)
.-...|-...+.|+.|+.+.+-...=|.+ .++| +|-.=|.+.|.||..|...+.+|+..+|..- .+++.-..=|.
T Consensus 19 ~~~~~LN~~i~~El~a~~~Yl~~a~~~~~--~gl~-~~a~~f~~~a~EE~~HA~~l~e~i~~lGG~p~l~~i~~p~~~~~ 95 (181)
T 3bvf_A 19 DIIKLLNEQVNKEMNSSNLYMSMSSWCYT--HSLD-GAGLFLFDHAAEEYEHAKKLIIFLNENNVPVQLTSISAPEHKFE 95 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCCCCC
Confidence 34677888889999999997755444543 2344 4555566789999999999999999999873 33222222221
Q ss_pred HHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHh
Q 016349 237 QCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVA 295 (391)
Q Consensus 237 ~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa 295 (391)
|+..=|. .-+.+|..-.+.-+.+++.-...||..++..|+-|+.|+|.+..
T Consensus 96 -------~~~e~le-~aL~~E~~~~~~~~~l~~~A~~~~D~~t~~~l~~~l~eqvEe~~ 146 (181)
T 3bvf_A 96 -------GLTQIFQ-KAYEHEQHISESINNIVDHAIKSKDHATFNFLQWYVAEQHEEEV 146 (181)
T ss_dssp -------CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHTHHHHHHHHHHHH
T ss_pred -------CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHH
Confidence 1111111 11234444444445566777788999999999999999888876
No 25
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=95.99 E-value=0.07 Score=44.97 Aligned_cols=129 Identities=16% Similarity=0.104 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC-CCCCccchhhHHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK-YGDMPAHDVLWNQCK 239 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YGDlPaH~gLWe~a~ 239 (391)
+..|-..-..|+.|+...+-..+.|.+. ++ .++..=|-+.+.+|..|...+.+|+..+|.. -++++--
T Consensus 8 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~~--~~-~~l~~~f~~~a~ee~~had~l~eri~~lGg~p~~~~~~~-------- 76 (154)
T 3r2k_A 8 IDYLNTLLTGELAARDQYFIHSRMYEDW--GF-SKLYERLNHEMEEETQHADALLRRILLLEGTPRMRPDDI-------- 76 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC--CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC--------
Confidence 4455555556999999877666666431 11 2344445678999999999999999999864 1122100
Q ss_pred hhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHh-HhhhHhhhhHHHHHHH
Q 016349 240 KSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADE-EVAHVAVGVHWFLSVC 305 (391)
Q Consensus 240 ~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~D-EI~HVa~G~rWF~~lC 305 (391)
....++..-|. .-+-+|....+.=..+++.....||..++++|+.|..| |..|+ .||+...
T Consensus 77 ~~~~~~~e~l~-~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~e~ee~h~----~~l~~~l 138 (154)
T 3r2k_A 77 HPGTTVPEMLE-ADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHA----YWLEQQL 138 (154)
T ss_dssp CCCSSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHH----HHHHHHH
T ss_pred CCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 01112222111 12233444344444556666677999999999999999 99998 4565543
No 26
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=95.89 E-value=0.38 Score=40.60 Aligned_cols=126 Identities=16% Similarity=0.085 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhhHHHHHh
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVLWNQCKK 240 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gLWe~a~~ 240 (391)
+..|-..-.-|+.|+....-..+.|.+. ++ .++..=|-+.+.+|..|...+.+|+..+|.. |....+- ...
T Consensus 10 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~~--~~-~~l~~~f~~~a~ee~~Had~l~e~i~~lGg~----p~~~~~~-~~~- 80 (161)
T 3uoi_A 10 LRLLNEQLTSELTAINQYFLHSKMQDNW--GF-TELAAHTRAESFDEMRHAEEITDRILLLDGL----PNYQRIG-SLR- 80 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----CCCSCCC-CCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC----CcCCCCC-CCC-
Confidence 4455555556999999877666566431 12 2445555678999999999999999999864 2111100 000
Q ss_pred hhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhh
Q 016349 241 SSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAV 296 (391)
Q Consensus 241 T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~ 296 (391)
...++..-|. .-+-+|..-.+.=..+++.....||..++++|+.|..||..|+..
T Consensus 81 ~~~~~~e~l~-~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eee~h~~~ 135 (161)
T 3uoi_A 81 IGQTLREQFE-ADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDY 135 (161)
T ss_dssp CCSSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0012222111 111233333333334555566789999999999999999999943
No 27
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=95.88 E-value=0.35 Score=42.54 Aligned_cols=121 Identities=15% Similarity=0.093 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC-----CCCCccchhhH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK-----YGDMPAHDVLW 235 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~-----YGDlPaH~gLW 235 (391)
+..|-..-.-|+.|+....-..+.|.+. ++ .++..=|-+.+.||..|...+.+|+..+|.. .+.++.-
T Consensus 29 ~~~LN~~la~E~~a~~~Y~~~a~~~~~~--~~-~~l~~~f~~~a~eE~~Had~laeri~~lGg~p~~~~~~~~~~~---- 101 (182)
T 3fvb_A 29 IERLNEALFLELGAVNQYWLHYRLLNDW--GY-TRLAKKEREESIEEMHHADKLIDRIIFLEGFPNLQTVSPLRIG---- 101 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--TC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCCCCCC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC--Ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCcCCCCCCCCCC----
Confidence 4556555567999999877666666421 11 2444556678999999999999999999864 2222211
Q ss_pred HHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhh
Q 016349 236 NQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAV 296 (391)
Q Consensus 236 e~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~ 296 (391)
.++..=|. .-+-.|..-.+.=..+++.-...||..++++|+.|..||..|+..
T Consensus 102 -------~~~~e~l~-~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~il~eEe~h~~~ 154 (182)
T 3fvb_A 102 -------QNVKEVLE-ADLKGEYDARASYKESREICDKLGDYVSKQLFDELLADEEGHIDF 154 (182)
T ss_dssp -------SSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 12221111 112233332222233455555789999999999999999999743
No 28
>3vnx_A Ferritin; 4-helix bundle, iron storage, oxidoreductase; 2.40A {Ulva pertusa}
Probab=95.79 E-value=0.58 Score=42.81 Aligned_cols=141 Identities=13% Similarity=0.036 Sum_probs=89.0
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccchh
Q 016349 156 GLPLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHDV 233 (391)
Q Consensus 156 ~~~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~g 233 (391)
..+.-...|....+.||.|+++.+-..+=|....-++| +|..=|.+.+.||-.|...+.+++..+|.. +.+++.-..
T Consensus 36 ~~~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kLi~yi~~rGG~~~l~~i~~p~~ 114 (204)
T 3vnx_A 36 YHIECEAAINEQINIEYTISYVYHALHSYFARDNVGLP-GFAKFFKEASDEEREHAHMLMDYQTKRGGRVELKPLAAPEM 114 (204)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCCc
Confidence 33455788999999999999998877766752111343 455555668999999999999999999974 555544331
Q ss_pred -----hHHHHHhh-hhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHH-HHHHhHhhhHhhhhHHHHHHHH
Q 016349 234 -----LWNQCKKS-SDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVA-RIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 234 -----LWe~a~~T-~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~-iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
-|....+. ..++..=-.+....+ .+++--...+|..+.+.|+ -+++|++.|++.=...+..++.
T Consensus 115 ~~~~~~~~~~~e~le~aL~~Ek~v~~~l~---------~l~~lA~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~~ 185 (204)
T 3vnx_A 115 EFANDDKGEALYAMELALSLEKLNFQKLQ---------ALQAIADKHKDAALCDFVEGGLLSEQVDAVKEHAVYVSQLRR 185 (204)
T ss_dssp CCCCTTTCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHTTCHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12111110 011111111111111 2333445679999999999 7999999998754445555543
No 29
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=95.64 E-value=0.29 Score=41.42 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhhHHHHHh
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVLWNQCKK 240 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gLWe~a~~ 240 (391)
+..|-..-.-|+.|+....-..+.+.+. ++ .++..=|-+.+.||..|...+.+|+..||.. |....+ ... .
T Consensus 8 ~~~Ln~~la~E~~a~~~Y~~~a~~~~~~--~~-~~l~~~f~~~a~ee~~Had~l~eri~~lGg~----p~~~~~-~~~-~ 78 (161)
T 3gvy_A 8 IEYLNAALRSELTAVSQYWLHYRLQEDW--GF-GSIAHKSRKESIEEMHHADKLIQRIIFLGGH----PNLQRL-NPL-R 78 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT--TC-TTHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----CCCSCC-CCC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--Ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CccCCC-CCC-C
Confidence 4455555556999999876555445321 11 2344455678999999999999999999863 111000 000 0
Q ss_pred hhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHH
Q 016349 241 SSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWF 301 (391)
Q Consensus 241 T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF 301 (391)
...++..-|. .-+-.|..-.+.=..+++.....||..++++|+.|..||..|+..=..++
T Consensus 79 ~~~~~~e~l~-~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l 138 (161)
T 3gvy_A 79 IGQTLRETLD-ADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQI 138 (161)
T ss_dssp CCSSHHHHHH-HHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112222111 11233333223233344455568999999999999999999985433333
No 30
>1vlg_A Ferritin; TM1128, structural genomics, JCSG, protein structu initiative, PSI, joint center for structural genomics, META protein; 2.00A {Thermotoga maritima} SCOP: a.25.1.1 PDB: 1z4a_A*
Probab=95.54 E-value=0.089 Score=46.13 Aligned_cols=132 Identities=17% Similarity=0.120 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC--CCCccchhhHHH
Q 016349 160 NAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY--GDMPAHDVLWNQ 237 (391)
Q Consensus 160 ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y--GDlPaH~gLWe~ 237 (391)
-+..|-...+.|+.|+.+.+-...=|.+ .++| +|..=|-+.+.||..|...+.+|+..+|..- .+++.-..=|..
T Consensus 20 ~~~~Ln~~l~~El~a~~~Yl~~a~~~~~--~~~~-~la~~f~~~a~EE~~HAd~l~eri~~lGg~~~l~~i~~p~~~~~~ 96 (176)
T 1vlg_A 20 VRKALNDQLNREIYSSYLYLSMATYFDA--EGFK-GFAHWMKKQAQEELTHAMKFYEYIYERGGRVELEAIEKPPSNWNG 96 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcc--CCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeecCCCCCCCCCCCC
Confidence 4677888888999999886543332443 1233 4555556689999999999999999999873 333332222321
Q ss_pred HHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 238 CKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 238 a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
..+. + .. -+-+|..-.+.-..+++.-...||..++++|+-++.|++.|+. |+..+..
T Consensus 97 ~~e~----l---e~-~l~~E~~v~~~~~~l~~~A~~~~D~~t~~~l~~~l~eq~ee~~----~l~~~l~ 153 (176)
T 1vlg_A 97 IKDA----F---EA-ALKHEEFVTQSIYNILELASEEKDHATVSFLKWFVDEQVEEED----QVREILD 153 (176)
T ss_dssp HHHH----H---HH-HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred HHHH----H---HH-HHHHHHHHHHHHHHHHHHHHHcCCHhHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 1111 1 10 1123333223334466666778999999999999999988886 6655443
No 31
>3kxu_A Ferritin; iron storage protein, disorder, iron, metal binding protein; 1.85A {Homo sapiens} PDB: 3hx2_A 3hx5_A 3hx7_A
Probab=95.46 E-value=0.11 Score=47.21 Aligned_cols=139 Identities=14% Similarity=0.093 Sum_probs=86.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCccch-hh
Q 016349 158 PLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMPAHD-VL 234 (391)
Q Consensus 158 ~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlPaH~-gL 234 (391)
+.-...|....+.||.|+++.+-..+=|....-++| .|..=|.+.+.||-.|...+.+++..+|.. +.+++.-. .=
T Consensus 11 ~~v~~~LN~qin~EL~As~~Ylsma~~f~~~d~~l~-g~a~~f~~~s~EE~~HA~kl~~yi~~rgG~~~l~~i~~p~~~~ 89 (191)
T 3kxu_A 11 TDVEAAVNSLVNLYLQASYTYLSLGFYFDRDDVALE-GVSHFFRELAEEKREGYERLLKMQNQRGGRALFQDIKKPAEDE 89 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCcCCCCccc
Confidence 344778899999999999998877666752111243 444444567889999999999999999964 55654443 12
Q ss_pred HHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHH-HHHHhHhhhHhhhhHHHHHHH
Q 016349 235 WNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVA-RIADEEVAHVAVGVHWFLSVC 305 (391)
Q Consensus 235 We~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~-iI~~DEI~HVa~G~rWF~~lC 305 (391)
|....+.-..- +-+|..--..--.+++--...+|..+.+.|+ -+++|++.|++.=..-+..++
T Consensus 90 ~~s~~e~le~a--------L~~Ek~v~~~l~~l~~la~~~~D~~t~~fLe~~fL~EQve~i~~l~~~l~~l~ 153 (191)
T 3kxu_A 90 WGKTPDAMKAA--------MALEKKLNQALLDLHALGSARTDPHLCDFLETHFLDEEVKLIKKMGDHLTNLH 153 (191)
T ss_dssp CCSHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHH--------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43222111110 1122211111112444445679999999999 499999999865434444443
No 32
>1j30_A 144AA long hypothetical rubrerythrin; sulerythrin, sulfolobus tokodaii strain 7, FOU bundle, domain swapping, metal binding site plasticity; 1.70A {Sulfolobus tokodaii} SCOP: a.25.1.1
Probab=95.42 E-value=0.16 Score=43.12 Aligned_cols=125 Identities=15% Similarity=0.007 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHH--hCCCCCCCccchhhHHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAE--LGFKYGDMPAHDVLWNQC 238 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~e--LG~~YGDlPaH~gLWe~a 238 (391)
...|-..-.-|+.|++..+-...-+.+ .++| ++-.=|-+.|.+|..|...+.++|.. +|.-=++.| |
T Consensus 10 ~~~Ln~a~~~E~~A~~~Y~~~A~~a~~--~g~~-~~a~~f~~~A~eE~~HA~~~~~~l~~~~lg~p~~~~p-----~--- 78 (144)
T 1j30_A 10 AENLKQGFIGESMANRRYLYFAKRADE--EGYP-EIAGLLRSIAEGETAHAFGHLDFIRQGGLTDPATDKP-----I--- 78 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTTSCB-----C---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCcCCC-----C---
Confidence 456666667899999986644333321 1232 34444456899999999999999998 655212222 1
Q ss_pred HhhhhcHHHHHhhchhhHhhcC-CCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHH
Q 016349 239 KKSSDNVAARLAVIPLVQEARG-LDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVC 305 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlEARG-LDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC 305 (391)
..|.+-|- . -+-+|..- -+.=|.+++.-+..||..++++++.|..||..|.. ||..+-
T Consensus 79 ~~~~e~L~--~---al~~E~~~~~~~y~~~~~~A~~egd~~~~~~f~~i~~~E~~H~~----~~~~~l 137 (144)
T 1j30_A 79 GTLEQMIE--S---AIAGETYEWTQMYPGFAKVAREEGFPEVAEWFETLARAEKSHAE----KFQNVL 137 (144)
T ss_dssp SSHHHHHH--H---HHHHHHHHHHTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH----HHHHHH
T ss_pred ccHHHHHH--H---HHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence 11221111 1 22445555 35567888999999999999999999999999974 555543
No 33
>1otk_A Protein PAAC, phenylacetic acid degradation protein PAAC; structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: a.25.1.2 PDB: 3pvt_B* 3pvr_B* 3pvy_B* 3pw1_B* 3pw8_A* 3pwq_A
Probab=95.07 E-value=0.069 Score=50.91 Aligned_cols=99 Identities=19% Similarity=0.157 Sum_probs=67.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHh-CCC------CCCCcc--chh-hHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHH
Q 016349 200 FAHVADDESRHFAWCSQRLAEL-GFK------YGDMPA--HDV-LWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQ 269 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eL-G~~------YGDlPa--H~g-LWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~ 269 (391)
.+.++.||.-|.+++-+.+.+| |.. |.--+. +|- |.+.-..+-.+.+.|-.++-... -...+
T Consensus 39 lanialDelGhar~ly~~a~~l~G~~~~D~La~~R~~~~frn~~l~e~P~gdwa~ti~r~~l~d~~~--------~~~~~ 110 (249)
T 1otk_A 39 LANIGLDLLGQARNFLSYAAELAGEGDEDTLAFTRDERQFSNLLLVEQPNGNFADTIARQYFIDAWH--------VALFT 110 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHSCCGGGCCCCGGGGSCCCSHHHHHHHHHHHHHHH--------HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHhcCHHHhhccHHHcCCCCCHHHHHHHHHHHHHHH--------HHHHH
Confidence 5689999999999999999999 853 111010 111 11111111112233333333221 13667
Q ss_pred HHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 270 KLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 270 kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
.|....|..-+.|+.+|..||-=|+..|..|+..+|.
T Consensus 111 ~L~~ss~~plA~ia~K~~kEe~yH~~h~~~w~~rL~~ 147 (249)
T 1otk_A 111 RLMESRDPQLAAISAKAIKEARYHLRFSRGWLERLGN 147 (249)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8889999999999999999999999999999999984
No 34
>2itb_A TRNA-(MS(2)IO(6)A)-hydroxylase, putative; putative ATTH, structural genomics, joint center for structu genomics, JCSG; 2.05A {Pseudomonas putida} SCOP: a.25.1.7
Probab=95.03 E-value=0.25 Score=46.09 Aligned_cols=134 Identities=15% Similarity=0.179 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccch---hhHHH
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHD---VLWNQ 237 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~---gLWe~ 237 (391)
-.+|-.=||-|.=|--.|.-.+.||++ -.+-..-....|.||-.||.++.+.|.+-|+.||.++.-. +|-+.
T Consensus 29 ~~iL~DHA~CE~KAA~tAm~Li~rYp~-----~~~Lv~~m~~LarEEL~HFeqVl~im~~Rgi~l~~~~~~~Ya~~L~k~ 103 (206)
T 2itb_A 29 ETLLIDHKNCEFKAASTALSLIAKYNT-----HLDLINMMSRLAREELVHHEQVLRLMKRRGVPLRPVSAGRYASGLRRL 103 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTT-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 456777789999999889989999986 3466788899999999999999999999999999998874 45444
Q ss_pred HHhhh-hcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHc
Q 016349 238 CKKSS-DNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKM 308 (391)
Q Consensus 238 a~~T~-~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~ 308 (391)
+.... +-+++||-| -=+.|||+.. -..+|...=|.+-++--.-++.-|-+|... |-.++++.
T Consensus 104 vr~~ep~~l~D~Llv-~AlIEARSCE----RF~lLa~~l~d~L~~FY~~Ll~SEArHy~~----yl~LA~~y 166 (206)
T 2itb_A 104 VRAHEPVKLVDTLVV-GAFIEARSCE----RFAALVPHLDEELGRFYHGLLKSEARHYQG----YLKLAHNY 166 (206)
T ss_dssp SCSSTTHHHHHHHHH-HHHHHHHHHH----HHHHHGGGSCHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
T ss_pred ccCCChHHHHHHHHH-HHHHHHHhHH----HHHHHHhcCcHHHHHHHHHHHHHHhhHHHH----HHHHHHHH
Confidence 33211 346677654 4488999764 333333444444555566678889999754 33445544
No 35
>1mty_D Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1mmo_D 1xvb_A 1fyz_A 1fz0_A 1fz2_A 1fz3_A 1fz4_A 1fz5_A 1fz6_A 1fz7_A 1fz8_A 1fz9_A 1fzh_A 1fzi_A 1xmf_A 1xmg_A 1xmh_A 1xu3_A 1xu5_A 1fz1_A ...
Probab=95.01 E-value=0.094 Score=54.60 Aligned_cols=140 Identities=21% Similarity=0.147 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCC---Cc------cc
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGD---MP------AH 231 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGD---lP------aH 231 (391)
..++=+++|.|+.|..-.. .+.|+... ..=..--+..+.||.||......+.++++-.|-| |. -|
T Consensus 90 k~~l~av~~~EY~a~~~~a-~~~r~ap~-----~~~rnaaa~qalDElRHaQ~~~~l~k~~~~~~~dp~Gfd~~r~~~~~ 163 (512)
T 1mty_D 90 KVVSNFLEVGEYNAIAATG-MLWDSAQA-----AEQKNGYLAQVLDEIRHTHQCAYVNYYFAKNGQDPAGHNDARRTRTI 163 (512)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHCCS-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTTTTHHHHGGG
T ss_pred HHHHcccCHHHHHHHHHHH-HHHHhCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccCCCHHHHHhcc
Confidence 3455568899999998554 34788742 1112223456779999999877766777744422 11 11
Q ss_pred hhhHHHHHhh------hhcHHHHHhhchhhHhhc--CCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHH
Q 016349 232 DVLWNQCKKS------SDNVAARLAVIPLVQEAR--GLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLS 303 (391)
Q Consensus 232 ~gLWe~a~~T------~~dllaRlAvVp~vlEAR--GLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~ 303 (391)
+-.|+.+.+. ..|...-+.-+..|+|.- +|=..+ +++--...||..+..++.-|..||-.|.+.|..-++.
T Consensus 164 ~p~~q~~R~~fe~~~~t~D~~E~~valn~v~E~~~tnll~~~-~~~~Aa~nGD~~tptv~~siqsDEaRH~~~g~~ll~~ 242 (512)
T 1mty_D 164 GPLWKGMKRVFSDGFISGDAVECSLNLQLVGEACFTNPLIVA-VTEWAAANGDEITPTVFLSIETDELRHMANGYQTVVS 242 (512)
T ss_dssp SSHHHHHHHHHTHHHHSSCHHHHHHHHTTTHHHHTHHHHHHH-HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhhHHHHHHHhhcCChHHHhhhhhhhHHHHhHHHHHHH-HHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233332222 245555555677777762 111111 4566678999999999999999999999999999999
Q ss_pred HHHH
Q 016349 304 VCQK 307 (391)
Q Consensus 304 lC~~ 307 (391)
++++
T Consensus 243 Lled 246 (512)
T 1mty_D 243 IAND 246 (512)
T ss_dssp HTTS
T ss_pred HHcC
Confidence 9874
No 36
>1z6o_M Ferritin heavy chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=94.62 E-value=2 Score=38.58 Aligned_cols=79 Identities=18% Similarity=0.011 Sum_probs=58.1
Q ss_pred CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC
Q 016349 146 AKEIPAPKNSGLPLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY 225 (391)
Q Consensus 146 P~~vPrrk~~~~~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y 225 (391)
+..+|..+....+.-...|....+.||.|+...+-..+=|.+..-++| +|-.=|-+.|.||-.|...+.+++..+|..-
T Consensus 7 ~~~~~~~~~~~~~~~~~~LN~qin~El~As~~Yl~ma~~f~~~~~~l~-g~a~~f~~~s~EE~~HA~kli~yi~~rGg~~ 85 (191)
T 1z6o_M 7 PVQIPKDWITMHRSCRNSMRQQIQMEVGASLQYLAMGAHFSKDVVNRP-GFAQLFFDAASEEREHAMKLIEYLLMRGELT 85 (191)
T ss_dssp CCCCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CccCcHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 334455444444555789999999999999998877666664211344 5555556789999999999999999999855
No 37
>3ge3_A Toluene-4-monooxygenase system protein A; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} SCOP: a.25.1.2 PDB: 3ge8_A 3dhi_A* 3dhh_A* 3dhg_A* 3i5j_A 3i63_A 3q14_A 3q2a_A* 3q3m_A* 3q3n_A* 3q3o_A* 3rmk_A* 3ri7_A
Probab=94.40 E-value=0.26 Score=51.17 Aligned_cols=139 Identities=17% Similarity=0.097 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCc-----cchhhHH
Q 016349 162 YMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMP-----AHDVLWN 236 (391)
Q Consensus 162 ~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlP-----aH~gLWe 236 (391)
..+=++.|.|+.|. .+.-.+.|+.... .+- .--.=.+.||.||.....-+..+|..++..|- .|+.-|.
T Consensus 95 ~~~~av~~~Ey~a~-~g~A~~~R~aps~-~~r----n~~~fQ~~DElRHaQ~q~y~~~~l~~~~~gFd~~~r~~~d~~W~ 168 (500)
T 3ge3_A 95 SHYGAIAVGEYAAV-TGEGRMARFSKAP-GNR----NMATFGMMDELRHGQLQLFFPHEYCKKDRQFDWAWRAYHSNEWA 168 (500)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHCSCH-HHH----HHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGGHHHHGGGSCCHH
T ss_pred HHhcccchHHHHHH-HHHHHHHHhCCCH-HHH----HHHHHHHHHHHHHHHHHHHHHHHhcccCcccChHHHHHhCchhh
Confidence 34556899999996 4555778987531 111 11222567999999998888888876555442 3445555
Q ss_pred --HHHh------hhhcHHHHHhhchhhHhhc--CCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 237 --QCKK------SSDNVAARLAVIPLVQEAR--GLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 237 --~a~~------T~~dllaRlAvVp~vlEAR--GLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
.+.+ +..|...-+..+.+|+|.- +|=..+ +++--...||..+..++.-|..||-.|.+.|.-=++.+.+
T Consensus 169 ~~~~R~~fE~~~~t~Dw~E~~valnlvfEp~~tnll~v~-l~~~Aa~NGD~~tptl~~S~qsDe~Rh~~~g~alv~~lle 247 (500)
T 3ge3_A 169 AIAAKHFFDDIITGRDAISVAIMLTFSFETGFANMQFLG-LAADAAEAGDYTFANLISSIQTDESRHAQQGGPALQLLIE 247 (500)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHTCCCCCCCCHHHHHTH-HHHHHHHTTCHHHHHHHHHHHHHHHHHGGGHHHHHHHHHH
T ss_pred hhHHHHHHHHHHccCCHHHHHHHHHhhHHHhhhHHHHHH-HHHHHHHcCChhhHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 2222 1345666666777777752 222233 5667778999999999999999999999999999999887
Q ss_pred H
Q 016349 307 K 307 (391)
Q Consensus 307 ~ 307 (391)
+
T Consensus 248 ~ 248 (500)
T 3ge3_A 248 N 248 (500)
T ss_dssp T
T ss_pred c
Confidence 6
No 38
>3u52_A Phenol hydroxylase component PHN; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_A 2inp_A
Probab=94.22 E-value=0.34 Score=50.45 Aligned_cols=136 Identities=16% Similarity=0.139 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCC-------------
Q 016349 162 YMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDM------------- 228 (391)
Q Consensus 162 ~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDl------------- 228 (391)
..+=.+.|.|+.| ..+.-.+.||... ...-.--+=.|.||.||..++...+..|+-.|..|
T Consensus 99 ~~l~al~~~EYgA-~~~~a~~~r~~~g-----~~~~na~~fqa~DeLRhAQ~~~~~~~~l~~~~~Gf~d~a~~~d~~W~~ 172 (511)
T 3u52_A 99 LFISGISPLEHAA-FQGYSKVGRQFSG-----AGARVACQMQAIDELRHSQTQQHAMSHYNKHFNGLHDGPHMHDRVWYL 172 (511)
T ss_dssp HHHHHTHHHHHHH-HHHHHHHHHHCSC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCTTHHHHHTTCGGG
T ss_pred HHhccccHHHHHH-HHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccChhhhhcCccccc
Confidence 3445688999999 4566678888742 23344445568899999999999888887776555
Q ss_pred -ccchhhHHHHHhhhhcHHHHHhhchhhHhhc--CCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHH
Q 016349 229 -PAHDVLWNQCKKSSDNVAARLAVIPLVQEAR--GLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVC 305 (391)
Q Consensus 229 -PaH~gLWe~a~~T~~dllaRlAvVp~vlEAR--GLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC 305 (391)
+. ..++|.+. | .|...-+-.+.+|+|.- +|=..+ +.+--...||..+..++..|..||-.|.+.|.-=|+.+.
T Consensus 173 ~~~-R~~vEd~~-t-~Dw~E~~vA~nlv~E~l~tnLl~~~-~~~~Aa~nGD~~t~t~~~s~qsDesRh~~w~~alvk~~l 248 (511)
T 3u52_A 173 SVP-KSFFDDAR-S-AGPFEFLTAISFSFEYVLTNLLFVP-FMSGAAYNGDMATVTFGFSAQSDEARHMTLGLEVIKFIL 248 (511)
T ss_dssp HHH-HHHHHHHH-H-SCHHHHHHHHTTCCCCCCHHHHHHH-HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhh-HHHHhhcc-c-cCHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 66777775 4 47777776677777753 122222 234445679999999999999999999999999999988
Q ss_pred HH
Q 016349 306 QK 307 (391)
Q Consensus 306 ~~ 307 (391)
++
T Consensus 249 ~~ 250 (511)
T 3u52_A 249 EQ 250 (511)
T ss_dssp HH
T ss_pred hc
Confidence 75
No 39
>2vxx_A Starvation induced DNA binding protein; stress response protein, DPS, oxidation, iron binding, ferroxidase centre; HET: PG4; 2.40A {Synechococcus elongatus}
Probab=94.11 E-value=0.88 Score=40.36 Aligned_cols=122 Identities=12% Similarity=0.052 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC-C---------CCcc
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY-G---------DMPA 230 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y-G---------DlPa 230 (391)
+..|-.+-.-|+.|+....-..+.+.+. ++ .++..=+-+.+.||..|+..+.+|+..||..- + .++.
T Consensus 30 i~~LN~~La~e~~a~~~y~~~hw~v~g~--~f-~~lh~~~~~~~~ee~~had~laErI~~LGg~p~~~~~~~~~~s~i~e 106 (192)
T 2vxx_A 30 CEGMNRLLASFQALYLQYQKHHFVVEGA--EF-YPLHQFFQDCYEQVQDHVHALGERLNGLGGVPVAGFQQLAALCCFTP 106 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCST--TH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC--Ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCcCCC
Confidence 5666667778999999988888787642 11 23334455688899999999999999999752 2 2331
Q ss_pred chhhHHHHHhhh-hcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 231 HDVLWNQCKKSS-DNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 231 H~gLWe~a~~T~-~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
...=|..+.+.- .++..--.++-.+- .+++.....||..+.++|+-|+.||-.|+
T Consensus 107 ~~~~~~~~~e~l~~~l~~e~~~i~~~~---------~~i~~a~~~~D~~T~~lL~~~l~eeEkh~ 162 (192)
T 2vxx_A 107 EPEGAFNCRQMLSNDLQAEQAIIGVLR---------QQATQAESLGDRATAYLYDQILLKTEERA 162 (192)
T ss_dssp CCSSBCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 111011111111 12222222222222 23445557899999999999999999997
No 40
>1syy_A Ribonucleoside-diphosphate reductase beta chain; DIIRON, oxygen activation, iron coupled radical, immune EVAS replication, oxidoreductase; 1.70A {Chlamydia trachomatis} SCOP: a.25.1.2 PDB: 4d8g_A 4d8f_A 2ani_A
Probab=94.03 E-value=0.18 Score=49.31 Aligned_cols=148 Identities=11% Similarity=0.100 Sum_probs=87.8
Q ss_pred CCCchhhHHHHHHHHHH---H-HHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC----C
Q 016349 154 NSGLPLNAYMLHNLAHV---E-LNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK----Y 225 (391)
Q Consensus 154 ~~~~~~ra~lLHaiAHI---E-lnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~----Y 225 (391)
..+..+|-+..|.++-. + ...-+++. .++.+-... -=+.||. ..+.+|+.|-..+..-|..+|.+ |
T Consensus 69 ~Lt~~Er~~~~~~l~~~~~~D~iv~~~~~~-~l~~~v~~~--E~~~~l~---~q~~~EaiHs~sYs~il~tl~~~~~e~f 142 (346)
T 1syy_A 69 RLSEDERRVILLNLGFFSTAESLVGNNIVL-AIFKHVTNP--EARQYLL---RQAFEEAVHTHTFLYICESLGLDEKEIF 142 (346)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-THHHHCCCH--HHHHHHH---HHHHHHHHHHHHHHHHHHHHTCCHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHhCCcH--HHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCHHHHH
Confidence 34555677777776643 1 11222222 233332210 0124554 46789999999999999999864 2
Q ss_pred CCCccchhhHHHHH-------------------hhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHH
Q 016349 226 GDMPAHDVLWNQCK-------------------KSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDH-RTSNIVAR 285 (391)
Q Consensus 226 GDlPaH~gLWe~a~-------------------~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~i 285 (391)
...--...|-+.+. .+..+++.++.....++|+-=+=.+=.++--|.+.|-. -++++++-
T Consensus 143 ~~~~~~p~l~~k~~~i~~~y~~~~~~~~~~~~~~~~~~~~~~lva~~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~~ 222 (346)
T 1syy_A 143 NAYNERAAIKAKDDFQMEITGKVLDPNFRTDSVEGLQEFVKNLVGYYIIMEGIFFYSGFVMILSFHRQNKMIGIGEQYQY 222 (346)
T ss_dssp THHHHCHHHHHHHHHHHHTTSGGGSTTCCSSSHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHTTSSHHHHHHHHH
T ss_pred HHHhhCHHHHHHHHHHHHHHHHhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHH
Confidence 22111122211110 01235565665555677765433333345566677755 46889999
Q ss_pred HHHhHhhhHhhhhHHHHHHHHH
Q 016349 286 IADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 286 I~~DEI~HVa~G~rWF~~lC~~ 307 (391)
|.+||.-|+.+|...|+.+.++
T Consensus 223 I~RDE~~H~~f~~~l~~~~~~e 244 (346)
T 1syy_A 223 ILRDETIHLNFGIDLINGIKEE 244 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998875
No 41
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=93.41 E-value=0.58 Score=40.50 Aligned_cols=131 Identities=10% Similarity=0.061 Sum_probs=78.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchh---hHH--
Q 016349 162 YMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDV---LWN-- 236 (391)
Q Consensus 162 ~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~g---LWe-- 236 (391)
-+|-.....|..|++......-+..+ .+--.=|.+.|.+|.+|...+.+++.++ +|+.|.-+. .|.
T Consensus 23 e~L~~A~~~E~~a~~~Y~~~A~~~~~------~~~~~~f~~lA~~E~~H~~~l~~~~~~l---~g~~~~~~~~~~~~~~~ 93 (175)
T 2fzf_A 23 ELLGMAIKAEIGAREFYKSLAEKIKI------EALKEKINWLAEEEKKHEALLRKLYSQM---FPGKEVVFPKEHIGPEL 93 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCC------TTHHHHHHHHHHHTHHHHHHHHHHHHHH---STTCCCCCCSCCBSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCCCcchhhhhhhhh
Confidence 34444556799999987755554442 2344556679999999999999999987 222332111 111
Q ss_pred -----HHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 237 -----QCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 237 -----~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
... ...++ ..+--.-+-.|....+ .+.+-...+.|....++++.|..||..|+..=.+++..+.+
T Consensus 94 ~~~~~~~~-~~~~~-~~~L~~ai~~E~~a~~---~Y~~~a~~~~d~~~r~l~~~ia~eE~~H~~~l~~~l~~l~~ 163 (175)
T 2fzf_A 94 QPVARELE-KVQDI-IDLIRWAMKAEEIAAE---FYLKLEEMVKEEEKKRLMRYLADMERGHYYTLRAEYELLLN 163 (175)
T ss_dssp CCCCSCCC-SHHHH-HHHHHHHHHHHHHHHH---HHHHHHHTSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHhcc-ccCCH-HHHHHHHHHHHHHHHH---HHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 000 00111 1122222345655333 34444445689999999999999999998765555555543
No 42
>3ge3_B Toluene-4-monooxygenase system protein E; DIIRON hydroxylase, effector protein, T201A, aromatic hydrocarbons catabolism, FAD, flavoprotein; 1.52A {Pseudomonas mendocina} PDB: 3ge8_B 3i5j_B 3i63_B 3dhi_B* 3dhh_B* 3dhg_B* 3q14_B 3q2a_B* 3q3m_B* 3q3n_B* 3q3o_B* 3rmk_B* 3ri7_B
Probab=93.37 E-value=1 Score=44.18 Aligned_cols=137 Identities=12% Similarity=0.009 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHH---HHHHHHHhCCCCCCCccchhhH-----
Q 016349 164 LHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAW---CSQRLAELGFKYGDMPAHDVLW----- 235 (391)
Q Consensus 164 LHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~L---l~~RL~eLG~~YGDlPaH~gLW----- 235 (391)
+=.+.|.|+.|.= +--.+.|+... ...-.--+=.+.||-||..+ +...|..-+-.+|+.-.|.-.|
T Consensus 122 l~pl~~~e~~a~m-~~a~~~r~~~~-----~~i~na~~fqa~DelRhaQ~~q~~~~~l~~~~~~~~~~~~~k~~W~~dp~ 195 (327)
T 3ge3_B 122 YSPLRYLFHCLQM-SSAYVQQMAPA-----STISNCCILQTADSLRWLTHTAYRTHELSLTYPDAGLGEHERELWEKEPG 195 (327)
T ss_dssp TTTHHHHHHHHHH-HHHHHHHHCSS-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTSHHHHHHHCHH
T ss_pred hhHHHHHHHHHHH-HHHHHHHhcCC-----HHHHHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCCCchhHHHHHHhhCcc
Confidence 3347789988854 33357788642 22223333357899999666 4455555444444433444444
Q ss_pred -HHHHhh------hhcHHHHHhhchhhHhh--cCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 236 -NQCKKS------SDNVAARLAVIPLVQEA--RGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 236 -e~a~~T------~~dllaRlAvVp~vlEA--RGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
+.+.+. ..|..+-+-.+.+|+|. -+|=..+ +.+-....||..+..++..|..||-.|.+.|.-=|+.+++
T Consensus 196 Wq~~R~~~Ed~~~~~Dw~E~~vA~nlv~E~l~~~L~~~~-~~~~Aa~nGD~~t~~l~~s~qsD~~Rh~~~~~alvk~ll~ 274 (327)
T 3ge3_B 196 WQGLRELMEKQLTAFDWGEAFVSLNLVVKPMIVESIFKP-LQQQAWENNDTLLPLLIDSQLKDAERHSRWSKALVKHALE 274 (327)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHTHHHHHHHHTHHH-HHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333222 24666677778888885 2333333 4688889999999999999999999999999999999887
Q ss_pred H
Q 016349 307 K 307 (391)
Q Consensus 307 ~ 307 (391)
+
T Consensus 275 ~ 275 (327)
T 3ge3_B 275 N 275 (327)
T ss_dssp S
T ss_pred C
Confidence 6
No 43
>1ji5_A DLP-1; dodecamer, four-helix bundle, metal transport; 2.50A {Bacillus anthracis} SCOP: a.25.1.1
Probab=92.84 E-value=0.82 Score=37.85 Aligned_cols=90 Identities=12% Similarity=0.082 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCC----------CccchhhHHHHHhhhhcHH-HHHhhchhhHhhcCCCCC
Q 016349 196 FFADFAHVADDESRHFAWCSQRLAELGFKYGD----------MPAHDVLWNQCKKSSDNVA-ARLAVIPLVQEARGLDAG 264 (391)
Q Consensus 196 Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGD----------lPaH~gLWe~a~~T~~dll-aRlAvVp~vlEARGLDvt 264 (391)
+..=+-+.+.||..|...+.+|+..+|..-=. ++...+=| .+.+.-..++ .--.++-.+
T Consensus 35 l~~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~--------- 104 (142)
T 1ji5_A 35 LHEKFEELYTESATHIDEIAERILAIGGKPVATMKEYLEISSIQEAAYGE-TAEGMVEAIMKDYEMMLVEL--------- 104 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCCCCCCTTC-CHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhhCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHH---------
Confidence 44445568889999999999999999976211 22111112 1121111112 111222221
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHhHhhhHh
Q 016349 265 PRLTQKLIGFGDHRTSNIVARIADEEVAHVA 295 (391)
Q Consensus 265 P~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa 295 (391)
-.+++--...||..|.++|+-|+.||-.|+-
T Consensus 105 ~~~~~~a~~~~D~~t~~~l~~~l~e~ek~~w 135 (142)
T 1ji5_A 105 KKGMEIAQNSDDEMTSDLLLGIYTELEKHAW 135 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 1234444567999999999999999999973
No 44
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=92.20 E-value=0.53 Score=45.48 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=68.2
Q ss_pred HHHHHHHhhHHHHHHHHHHhC------------------CCCCC-CccchhhHHHHHhhhhcHHHHHhhchhhHhhcCCC
Q 016349 202 HVADDESRHFAWCSQRLAELG------------------FKYGD-MPAHDVLWNQCKKSSDNVAARLAVIPLVQEARGLD 262 (391)
Q Consensus 202 ~VA~DEarHF~Ll~~RL~eLG------------------~~YGD-lPaH~gLWe~a~~T~~dllaRlAvVp~vlEARGLD 262 (391)
+...||.||-..|++.|.--| ++-|+ =|.+.-.|-++++++..+..|
T Consensus 102 ~WtaEE~rHg~aL~~YL~~sg~vdp~~lE~~~~~~i~~g~~~~~~~p~~~~vy~~fqE~aT~v~y~-------------- 167 (275)
T 1za0_A 102 RWTAEEHLHAIALREYLVVTREVDPVANEDVRVQHVMKGYRAEKYTQVETLVYMAFYERCGAVFCR-------------- 167 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSCTTTTTCTTC----------CCCHHHHHHHHHHHHHHHHHHHH--------------
T ss_pred hHhHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------
Confidence 457899999999999996434 22220 044555555555554333222
Q ss_pred CCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHcCCCchHHHHHHHHhcC
Q 016349 263 AGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKMKRAPCSTFKDLLKEYD 324 (391)
Q Consensus 263 vtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~g~dp~~tf~~lv~~~~ 324 (391)
+--+..||..-++|+.+|-.||..|..+=.+=++.+.+..+......|.+.++++.
T Consensus 168 ------n~a~~~~dPvL~~i~~~IA~DE~RH~~~y~~~v~~~le~dpd~~~~A~a~~~~~~~ 223 (275)
T 1za0_A 168 ------NLAAQIEEPILAGLIDRIARDEVRHEEFFANLVTHCLDYTRDETIAAIAARAADLD 223 (275)
T ss_dssp ------HHHHHCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCC
T ss_pred ------HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHhcCc
Confidence 11157899999999999999999999987777777666544334556777777773
No 45
>1mhy_B Methane monooxygenase hydroxylase; oxidoreductase, NADP, one-carbon metabolism; 2.00A {Methylosinus trichosporium} SCOP: a.25.1.2 PDB: 1mhz_B
Probab=92.09 E-value=0.55 Score=47.39 Aligned_cols=141 Identities=11% Similarity=-0.010 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCc----------c
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMP----------A 230 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlP----------a 230 (391)
...+=.+.|.|+.|.-- .-.+.|+... ...-.--+=.+.||-||..++..++.+||-.|.++. .
T Consensus 149 ~~~l~p~r~~Eyga~~~-~a~~~r~~~~-----~~i~na~~fqa~DeLRhaQ~~~~~~~~l~~~~~g~~~~~~~~k~~W~ 222 (395)
T 1mhy_B 149 NKYFGALLYSEYGLFNA-HSSVGRDCLS-----DTIRQTAVFAALDKVDNAQMIQMERLFIAKLVPGFDASTDVPKKIWT 222 (395)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHCSS-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHH
T ss_pred HHHHhhhhHHHHHHHHH-HHHHHhhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHh
Confidence 34566788999988643 3456788742 233333344577999999999999999999998885 3
Q ss_pred chhhHHHHHhhh-------hcHHHHHhhchhhHhhc--CCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHH
Q 016349 231 HDVLWNQCKKSS-------DNVAARLAVIPLVQEAR--GLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWF 301 (391)
Q Consensus 231 H~gLWe~a~~T~-------~dllaRlAvVp~vlEAR--GLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF 301 (391)
|+-.|+-+.+.. .|...-+-.+.+|+|.- +|=..+..++--...||..+..++.-+..||-.|.+.|.-=|
T Consensus 223 ~dp~Wq~~R~~~E~~~l~~~Dw~E~~vA~nlv~E~l~~~L~~~~~~~~~Aa~nGD~~tptl~~s~q~D~~Rh~~~~~alv 302 (395)
T 1mhy_B 223 TDPIYSGARATVQEIWQGVQDWNEILWAGHAVYDATFGQFARREFFQRLATVYGDTLTPFFTAQSQTYFQTTRGAIDDLF 302 (395)
T ss_dssp HCGGGHHHHHHHHHHHHSCCCHHHHHHHHHHTHHHHHHHHHHTTTHHHHHTTTTCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCcchHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455665544332 35555666778888762 111122224445678999999999999999999999998888
Q ss_pred HHHHHH
Q 016349 302 LSVCQK 307 (391)
Q Consensus 302 ~~lC~~ 307 (391)
+.+.++
T Consensus 303 k~lle~ 308 (395)
T 1mhy_B 303 VYCLAN 308 (395)
T ss_dssp CCCCCT
T ss_pred HHHHhc
Confidence 887643
No 46
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=92.04 E-value=0.8 Score=44.06 Aligned_cols=134 Identities=13% Similarity=0.090 Sum_probs=79.0
Q ss_pred HHHHHHH--HHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CC-----------
Q 016349 162 YMLHNLA--HVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YG----------- 226 (391)
Q Consensus 162 ~lLHaiA--HIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YG----------- 226 (391)
.|+-.+. .=|+.|+-..|--.+.+.+ |.-|++=+..++.||-.|..|+...+..|+-. ..
T Consensus 24 ~L~e~~GG~~GElsAamqYl~Q~~~~~~-----~~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~~~~a~~~p~~~ 98 (266)
T 1o9i_A 24 RLQESLGGQWGETTGMMSFLSQGWASTG-----AEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDPSLA 98 (266)
T ss_dssp HHHHHHHSTTSHHHHHHHHHHHHHHCCS-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHHCTTHH
T ss_pred HHHHHhCCCccHHHHHHHHHHHHhcCCC-----cHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCcchhhcccchhhH
Confidence 4555566 4499999888866666653 43445555678899999999999999999542 11
Q ss_pred -----------------CCccch--hhHHHHHh-hhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHH
Q 016349 227 -----------------DMPAHD--VLWNQCKK-SSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARI 286 (391)
Q Consensus 227 -----------------DlPaH~--gLWe~a~~-T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI 286 (391)
.+|+.. .-|.++.- ...||.+=|- --+..|+++-- .+.+-++-..|....++|..|
T Consensus 99 ~~~~g~n~~~~~~~g~g~~p~ds~G~pWt~~yv~~~Gdl~aDL~-~niaaE~~Ar~---~Y~rl~~~tdDp~vkd~L~fL 174 (266)
T 1o9i_A 99 TTMAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMR-FNVVRESEARL---QVSRLYSMTEDEGVRDMLKFL 174 (266)
T ss_dssp HHHHHSCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHH-HHHHHHHHHHH---HHHHHHTTCCCHHHHHHHHHH
T ss_pred hhhcCCChHHHHhcCCCCCccCCCCCCCcccccccCCCHHHHHH-HHHHHHHHHHH---HHHHHHHhcCChhHHHHHHHH
Confidence 111110 11222221 1123332221 23345555422 223333445688888999999
Q ss_pred HHhHhhhHhhhhHHHHHH
Q 016349 287 ADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 287 ~~DEI~HVa~G~rWF~~l 304 (391)
+.+|+.|...=-+-++.+
T Consensus 175 i~RE~~H~~~f~~aLe~l 192 (266)
T 1o9i_A 175 LARETQHQLQFMKAQEEL 192 (266)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999998633444443
No 47
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=91.79 E-value=1.5 Score=37.69 Aligned_cols=115 Identities=16% Similarity=0.046 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHhh---hcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhh----------
Q 016349 168 AHVELNAIDLAWDTVV---RFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVL---------- 234 (391)
Q Consensus 168 AHIElnAIDLAwD~v~---RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gL---------- 234 (391)
-.+|..|++......- ...+ ..--.=|.+.|.||.+|...+.++...... +.+|.-..+
T Consensus 14 i~~E~~~~~~Y~~lA~~~~~~~~------~~~k~~f~~LA~eE~~H~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 85 (167)
T 2oh3_A 14 IALETEAAERYVELADMMEAHNN------LDTATVFRDMARFSTLHGDEIKQRSRALEL--PKLMSWQYRWKTPPEVGDE 85 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC------HHHHHHHHHHHHHHHHHHHHHHHHHTTSCC--CCCCGGGTSCCCCCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CccccccccCCCcHhhhhH
Confidence 3679999987665544 2221 133344566899999999999999776311 111222211
Q ss_pred HHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhh
Q 016349 235 WNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAV 296 (391)
Q Consensus 235 We~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~ 296 (391)
|.. ....++. .+--+-+-.|..+.+ .+.+-.....|..+.++++.|..||.+|+..
T Consensus 86 ~~~--~~~~~~~-~~l~~A~~~E~~a~~---fY~~~a~~~~d~~~k~~~~~la~eE~~H~~~ 141 (167)
T 2oh3_A 86 NDI--HYLMTPY-HALRYARDNEIRGME---YYKEAAANSADPEVKRLGADFAAEEAEHVVA 141 (167)
T ss_dssp -----CGGGSHH-HHHHHHHHHHHHHHH---HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhc--cccCCHH-HHHHHHHHHHHHHHH---HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 221 1111221 222223566777766 3555556689999999999999999999864
No 48
>1mty_B Methane monooxygenase hydroxylase; dinuclear iron center monooxygenase; 1.70A {Methylococcus capsulatus str} SCOP: a.25.1.2 PDB: 1xvb_C 1fyz_C 1fz0_C 1fz2_C 1fz3_C 1fz4_C 1fz5_C 1fz6_C 1fz7_C 1fz8_C 1fz9_C 1fzh_C 1fzi_C 1xu3_C 1xu5_C 1fz1_C 1xvc_C 1xvd_C 1xve_C 1xvf_C ...
Probab=91.53 E-value=0.46 Score=47.75 Aligned_cols=139 Identities=9% Similarity=-0.058 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCc----cchhhHH--
Q 016349 163 MLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMP----AHDVLWN-- 236 (391)
Q Consensus 163 lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlP----aH~gLWe-- 236 (391)
.+=.+.|.|+.|.-- .-.+.|+... ...-.--+=.+.||-||..++..++.++|..|.+|. .|...|.
T Consensus 143 ~l~~~r~~Eyga~~~-~a~~~r~~~~-----~~i~na~~fqa~DeLRhaQ~~~~~~~~l~~~~~gf~~~~~~~k~~W~~d 216 (384)
T 1mty_B 143 YWGAFLFNEYGLFNA-HSQGAREALS-----DVTRVSLAFWGFDKIDIAQMIQLERGFLAKIVPGFDESTAVPKAEWTNG 216 (384)
T ss_dssp HHHHHHHHHHHHHHT-THHHHHHCSS-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCSHHHHHHHHHC
T ss_pred HHhhhhHHHHHHHHH-HHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCcchhHHHHHHHhhC
Confidence 566788999988643 3356787632 223333344577999999999999999998887774 5666665
Q ss_pred --------HHHhh---hhcHHHHHhhchhhHhhc--CCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHH
Q 016349 237 --------QCKKS---SDNVAARLAVIPLVQEAR--GLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLS 303 (391)
Q Consensus 237 --------~a~~T---~~dllaRlAvVp~vlEAR--GLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~ 303 (391)
.++++ ..|...=+..+.+|+|.- +|=+.+.+++--...||..+..++.-+..||-.|.+.|.-=|+.
T Consensus 217 p~wq~~R~~vE~~~l~~~Dw~E~~va~nlv~epl~~~L~~~~~~~~~Aa~nGD~~tp~l~~s~q~D~~Rh~~w~~alvk~ 296 (384)
T 1mty_B 217 EVYKSARLAVEGLWQEVFDWNESAFSVHAVYDALFGQFVRREFFQRLAPRFGDNLTPFFINQAQTYFQIAKQGVQDLYYN 296 (384)
T ss_dssp STTHHHHHHHHHHHHTCCCHHHHHHHHHHTHHHHHHHHHHHTTHHHHGGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred chhHHHHHHHHHHHhhccCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 135555566677777761 12222224555567899999999999999999999999888888
Q ss_pred HHHH
Q 016349 304 VCQK 307 (391)
Q Consensus 304 lC~~ 307 (391)
++++
T Consensus 297 lle~ 300 (384)
T 1mty_B 297 CLGD 300 (384)
T ss_dssp CCCT
T ss_pred HHhc
Confidence 7643
No 49
>2c41_A DPS family DNA-binding stress response protein; iron-binding/oxidation protein, DPS (DNA-binding proteins from starved cells); HET: PG4 PGE; 1.81A {Thermosynechococcus elongatus}
Probab=91.48 E-value=5.4 Score=33.89 Aligned_cols=121 Identities=11% Similarity=-0.039 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCC-CC---------Ccc
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKY-GD---------MPA 230 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~Y-GD---------lPa 230 (391)
+..|-..-.-|+.++....-.-+=+.+. + =..+..=+-+.+.||..|+-.+.+|+..||..- +. ++.
T Consensus 12 ~~~LN~~La~e~~~~~~y~~~hw~v~g~--~-f~~lh~~~~~~~~ee~~had~iaErI~~lGg~p~~~~~~~~~~s~i~~ 88 (158)
T 2c41_A 12 LTTLKREQANAVVMYLNYKKYHWLTYGP--L-FRDLHLLFEEQGSEVFAMIDELAERSLMLDGQPVADPADYLKVATVTP 88 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCST--T-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSGGGHHHHCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhheECc--C-hHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCC
Confidence 4566666667888888877665555531 1 123344445678899999999999999998762 22 222
Q ss_pred chhhHHHHHhhhhcHHH-HHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 231 HDVLWNQCKKSSDNVAA-RLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 231 H~gLWe~a~~T~~dlla-RlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
... +..+.+.-..++. --.++-.+- .+++.-...||..|.++|+-|+.||-.|+
T Consensus 89 ~~~-~~~~~e~l~~~l~~e~~~~~~~~---------~~i~~a~~~~D~~T~~ll~~~l~~~Ek~~ 143 (158)
T 2c41_A 89 SSG-QLTVKQMIEEAIANHELIITEMH---------QDAEIATEAGDIGTADLYTRLVQTHQKHR 143 (158)
T ss_dssp CCS-CCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 222 2222222222222 222222222 24555667899999999999999999986
No 50
>2inc_B Toluene, O-xylene monooxygenase oxygenase subunit; DIIRON, 4-helix bundle, carboxylate bridge, metalloenzyme, oxidoreductase; HET: P6G; 1.85A {Pseudomonas stutzeri} SCOP: a.25.1.2 PDB: 3n20_B* 1t0r_B 1t0s_B 1t0q_B* 3n1x_B 3n1y_B* 3n1z_B* 2rdb_B* 3rn9_B* 3rna_B 3rnb_B 3rnc_B 3rne_B 3rnf_B* 3rng_B 2ind_B*
Probab=91.15 E-value=3.5 Score=40.20 Aligned_cols=148 Identities=10% Similarity=0.040 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHH---HHHHHHHHhCCCCCCCccchhhHH------H
Q 016349 167 LAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFA---WCSQRLAELGFKYGDMPAHDVLWN------Q 237 (391)
Q Consensus 167 iAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~---Ll~~RL~eLG~~YGDlPaH~gLWe------~ 237 (391)
+-|.|..| .++.-.+.|+... ...-.--+=.+.||-||-. ++..-|..-+-.||+.-.+...|. -
T Consensus 121 ~~~~e~~~-~~~~a~~~r~~~~-----~~i~n~~~~qa~DelR~aQ~~~y~~~~L~~~~~~~g~~~~~k~~w~~~p~wq~ 194 (322)
T 2inc_B 121 ARYLFHAL-QMGSVYIHQIAPA-----STITNCATYETADHLRWLTHTAYRTRELANCYPDVGFGKRERDVWENDPAWQG 194 (322)
T ss_dssp HHHHHHHH-HHHHHHHHHHCSS-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCTTTSHHHHHHHCHHHHH
T ss_pred HHHHHHHH-HHHHHHHHHhcCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccchHHHHHHhcCchhHH
Confidence 55777755 3444466788742 2233333445779999999 555777777777776665555553 2
Q ss_pred HHh------hhhcHHHHHhhchhhHhhc--CCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHcC
Q 016349 238 CKK------SSDNVAARLAVIPLVQEAR--GLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKMK 309 (391)
Q Consensus 238 a~~------T~~dllaRlAvVp~vlEAR--GLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~g 309 (391)
+.+ +..|...-+-.+.+|+|.- +|=..+ +.+-....||..+..++..|..||-.|.+.|.-=|+.+.++
T Consensus 195 ~R~~~E~~~~~~Dw~E~~va~nlv~e~l~~~l~~~~-~~~~Aa~nGD~~t~~l~~s~q~D~~Rh~~~~~alvk~~~~~-- 271 (322)
T 2inc_B 195 FRELIEKALIAWDWGEAFTAINLVTKPAVEEALLQQ-LGSLAQSEGDTLLGLLAQAQKRDAERHRRWSSALVKMALEK-- 271 (322)
T ss_dssp HHHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHTHH-HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--
T ss_pred HHHHHHHhhccCCHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--
Confidence 222 2356677777778888863 333333 56777789999999999999999999999999999998775
Q ss_pred CCchHHHHHHHHhc
Q 016349 310 RAPCSTFKDLLKEY 323 (391)
Q Consensus 310 ~dp~~tf~~lv~~~ 323 (391)
-+-....+..+.++
T Consensus 272 ~~N~~~lq~wi~~w 285 (322)
T 2inc_B 272 EGNREVLQKWVAKW 285 (322)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHH
Confidence 11233445555444
No 51
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=90.95 E-value=1.1 Score=43.99 Aligned_cols=126 Identities=15% Similarity=0.118 Sum_probs=81.1
Q ss_pred HHHHHHH--HHHHHHHHHHHHHhhhcCCCcccchh---HHHHHHHHHHHHHHhhHHHHHHHHHHh--CCCCCCC------
Q 016349 162 YMLHNLA--HVELNAIDLAWDTVVRFSPFTDILED---GFFADFAHVADDESRHFAWCSQRLAEL--GFKYGDM------ 228 (391)
Q Consensus 162 ~lLHaiA--HIElnAIDLAwD~v~RF~~~~~~lP~---~Fy~Dwl~VA~DEarHF~Ll~~RL~eL--G~~YGDl------ 228 (391)
.|+-.+. .=|+.|+-..|--.+.+.+ |. +|++=+..++.||-.|..|+...+..| |..-..+
T Consensus 25 ~L~eq~GG~~GElsAamqYl~Qs~~~~~-----~~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~~ 99 (302)
T 2v8t_A 25 AVQALLGGRFGEMSTLMNYMYQSFNFRG-----KKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDP 99 (302)
T ss_dssp HHTHHHHSTTSHHHHHHHHHHHHHHCSC-----TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCCCCCCCCG
T ss_pred HHHHHhCCCccHHHHHHHHHHHHccCCC-----CcchHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCChhhhhccccc
Confidence 3445565 4499999888866666653 43 678877889999999999999999999 6543332
Q ss_pred -------------ccch--------------hhHHHHH-hhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHH
Q 016349 229 -------------PAHD--------------VLWNQCK-KSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTS 280 (391)
Q Consensus 229 -------------PaH~--------------gLWe~a~-~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa 280 (391)
|-|- .-|.++. .+..||.+=|- --+..|+++-- .+.+-++-..|....
T Consensus 100 ~~~p~~~a~~~~~~~~~i~~g~g~~p~ds~G~pWta~Yv~~~Gdl~aDL~-~NiaAE~~Ar~---~Y~rL~~~tdDp~vk 175 (302)
T 2v8t_A 100 ASTPLGFAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLL-HNFFLEVAART---HKLRVYEMTDNPVAR 175 (302)
T ss_dssp GGCTTGGGGGSSCSHHHHTSSSCCCSBCTTSCBCBGGGCCCCSCHHHHHH-HHHHHHHHHHH---HHHHHHTTCCCHHHH
T ss_pred ccchHHHhhhcCCcHHHhhcCCCCCccCCCCCCCCcchhcCCCCHHHHHH-HHHHHHHHHHH---HHHHHHHhcCChhHH
Confidence 1111 1233322 11223333222 33455666532 233334445688889
Q ss_pred HHHHHHHHhHhhhHhh
Q 016349 281 NIVARIADEEVAHVAV 296 (391)
Q Consensus 281 ~IL~iI~~DEI~HVa~ 296 (391)
++|..|+.+|+.|...
T Consensus 176 d~L~fLi~RE~~H~~~ 191 (302)
T 2v8t_A 176 EMIGYLLVRGGVHAAA 191 (302)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999975
No 52
>2rcc_A Ribonucleoside-diphosphate reductase subunit beta; NP_241368.1, putative class I ribonucleotide reductase, ribonucleotide reductase; HET: MSE PGE PG4; 1.90A {Bacillus halodurans c-125}
Probab=90.24 E-value=1.1 Score=43.67 Aligned_cols=106 Identities=15% Similarity=0.089 Sum_probs=71.9
Q ss_pred HHHHHHHhhHHHHHHHHHHhCC--C----CC---CCccch--hhHHH--HHh-----hhhcHHHHHhhchhhHhhcCCCC
Q 016349 202 HVADDESRHFAWCSQRLAELGF--K----YG---DMPAHD--VLWNQ--CKK-----SSDNVAARLAVIPLVQEARGLDA 263 (391)
Q Consensus 202 ~VA~DEarHF~Ll~~RL~eLG~--~----YG---DlPaH~--gLWe~--a~~-----T~~dllaRlAvVp~vlEARGLDv 263 (391)
..+.+|+.|-..+..-|..+|. + |. +.|.=. .-|-. ..+ +..+++.++.. ..++|+-=+=.
T Consensus 114 ~q~~~E~iHs~sYs~il~tl~~~~e~~~~f~~~~~~p~l~~k~~~i~~~~~~~~~~~~~~~~~~~lva-~~~lEgi~Fys 192 (346)
T 2rcc_A 114 VLSFQEVVHNQSYSYVLSSLVPKATQDEIFEYWKHDDVLKERNEFIIDGYEKFVDNPTPKTFLESIVY-DVILEGLNFYS 192 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHH-HHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHHhcCHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHH-HHHHHHHHHHH
Confidence 4568999999999999999864 1 11 112110 00100 000 12355666655 77888876655
Q ss_pred CHHHHHHHHhCCCh-hHHHHHHHHHHhHhhhHhhhhHHHHHHHHHc
Q 016349 264 GPRLTQKLIGFGDH-RTSNIVARIADEEVAHVAVGVHWFLSVCQKM 308 (391)
Q Consensus 264 tP~~i~kl~~~GD~-~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~ 308 (391)
+=.++--|.+.|-. -++.+++-|.+||.-|+.+|..=|+.+.++.
T Consensus 193 gF~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~e~ 238 (346)
T 2rcc_A 193 GFAFFYNLARNQKMVSTSTMINYINRDEQLHVYLFTNIFKELLVEF 238 (346)
T ss_dssp HHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcC
Confidence 55566677777754 5688999999999999999999999988754
No 53
>1jig_A DLP-2; dodecamer, four-helix bundle, metal transport; 1.46A {Bacillus anthracis} SCOP: a.25.1.1
Probab=90.07 E-value=2.2 Score=35.55 Aligned_cols=90 Identities=14% Similarity=0.106 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------CccchhhHHHHHhhhh-cHHHHHhhchhhHhhcCCCC
Q 016349 195 GFFADFAHVADDESRHFAWCSQRLAELGFK-YGD---------MPAHDVLWNQCKKSSD-NVAARLAVIPLVQEARGLDA 263 (391)
Q Consensus 195 ~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------lPaH~gLWe~a~~T~~-dllaRlAvVp~vlEARGLDv 263 (391)
++..=+-+.+.+|..|+..+.+|+..||.. .+. ++....=| .+.+.-. ++-.--.++-.+-|
T Consensus 38 ~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~------ 110 (146)
T 1jig_A 38 TLHEKFEEFYNEAGTYIDELAERILALEGKPLATMKEYLATSSVNEGTSKE-SAEEMVQTLVNDYSALIQELKE------ 110 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCcCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHH------
Confidence 344444567889999999999999999976 222 11111112 1222211 22222233332222
Q ss_pred CHHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 264 GPRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 264 tP~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.-...||..|.++|+-|..||-.|+
T Consensus 111 ---~i~~a~~~~D~~T~~ll~~~l~e~ek~~ 138 (146)
T 1jig_A 111 ---GMEVAGEAGDATSADMLLAIHTTLEQHV 138 (146)
T ss_dssp ---HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4555567899999999999999999997
No 54
>3ee4_A Probable ribonucleoside-diphosphate reductase; manganese, iron, DIIRON, carboxylate, oxidase, ligand, C monooxygenase; HET: MYR; 1.90A {Mycobacterium tuberculosis} PDB: 4ac8_A*
Probab=89.16 E-value=2 Score=41.78 Aligned_cols=110 Identities=17% Similarity=0.146 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCC------ccchhhHH----HHHh------hhhcHHHHHhhchhhHhh
Q 016349 195 GFFADFAHVADDESRHFAWCSQRLAELGFKYGDM------PAHDVLWN----QCKK------SSDNVAARLAVIPLVQEA 258 (391)
Q Consensus 195 ~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDl------PaH~gLWe----~a~~------T~~dllaRlAvVp~vlEA 258 (391)
.||.- .+.+|+.|-..+..-+..+|.+-.-+ |.-...|. ...+ +..+++.++.....++|+
T Consensus 101 ~~l~~---q~~~EaiHs~sYs~il~tl~~~~~~f~~~~~~p~lr~k~~~~l~~~~~~~~~~~~~~~~~~~lvaf~~~lEG 177 (323)
T 3ee4_A 101 MYLTQ---FAFEEAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADPSPAAQVRASVTYNHIVEG 177 (323)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHHHTCCSCCGGGGTTCHHHHHHHHTHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCT
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHcCHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 35554 47899999999999999999874322 22222221 1010 111244555554556675
Q ss_pred cCCCCCHH-HHHHHHhCCCh-hHHHHHHHHHHhHhhhHhhhhHHHHHHHHH
Q 016349 259 RGLDAGPR-LTQKLIGFGDH-RTSNIVARIADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 259 RGLDvtP~-~i~kl~~~GD~-~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~ 307 (391)
-=+=.+=. +.--|.+.|-. -++++++-|.+||.-|+.+|..=|+.+.++
T Consensus 178 i~FysgF~~~~~~l~~rg~m~G~~~~i~lI~RDE~~H~~f~~~l~~~l~~e 228 (323)
T 3ee4_A 178 MLALTGYYAWHKICVERAILPGMQELVRRIGDDERRHMAWGTFTCRRHVAA 228 (323)
T ss_dssp THHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 32222211 22246666654 468999999999999999999999998876
No 55
>4di0_A Rubrerythrin; ssgcid, seattle structural genomics center for infectious DI peroxidase, oxidoreductase; 1.90A {Burkholderia pseudomallei}
Probab=89.08 E-value=0.75 Score=39.92 Aligned_cols=117 Identities=19% Similarity=0.109 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHHHH--HHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhhHHHHH
Q 016349 162 YMLHNLAHVELNAIDLA--WDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVLWNQCK 239 (391)
Q Consensus 162 ~lLHaiAHIElnAIDLA--wD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gLWe~a~ 239 (391)
..|-.--.-|.+|+... +--+++--+ .|. .-.=|-+.|.+|..|-..+.++|..+|.--+.+|+ .
T Consensus 15 ~nL~~afagEs~A~~~Y~~~A~~A~~eG----~~~-iA~~F~~~A~~E~~HA~~~~~~L~~~~~p~~~~~~--------~ 81 (144)
T 4di0_A 15 ENLKYAFAGESQANRRYLYFASKADVEG----QND-IAALFRSTAEGETGHAHGHLEYLEAVGDPATGLPF--------G 81 (144)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT----CHH-HHHHHHHHHHHHHHHHHHHHHHHTTTCCTTTSCCC--------S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC----hHH-HHHHHHHHHHHHHHHHHHHHHHHhhcCCcccCCCC--------C
Confidence 34444445688998863 333333222 232 23334579999999999999999877633233443 3
Q ss_pred hhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHh
Q 016349 240 KSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVA 295 (391)
Q Consensus 240 ~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa 295 (391)
.|...|...++.=.... -+.=|.+++.-+.-|+...+++++.|..+|-.|..
T Consensus 82 ~T~enL~~A~~GE~~e~----~~~Y~~~a~~A~~eG~~~ia~~f~~~a~~E~~Ha~ 133 (144)
T 4di0_A 82 TSRQNLQSAIAGETHEY----TDMYPGMAKTARDEGFEEIANWFETLAKAERSHAN 133 (144)
T ss_dssp SHHHHHHHHHHHHHHHH----HTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhHHHHH----HHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHH
Confidence 45555554444322111 12346788888999999999999999999999974
No 56
>1n1q_A DPS protein; four-helix bundle, unknown function; 2.20A {Brevibacillus brevis} SCOP: a.25.1.1
Probab=89.04 E-value=2.8 Score=35.08 Aligned_cols=91 Identities=12% Similarity=0.086 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------CccchhhHHHHHhhhh-cHHHHHhhchhhHhhcCCCC
Q 016349 195 GFFADFAHVADDESRHFAWCSQRLAELGFK-YGD---------MPAHDVLWNQCKKSSD-NVAARLAVIPLVQEARGLDA 263 (391)
Q Consensus 195 ~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------lPaH~gLWe~a~~T~~-dllaRlAvVp~vlEARGLDv 263 (391)
++..=+-+.+.+|..|+..+.+|+..||.. .+. ++....=| .+.+.-. ++-.--.++-.+-|
T Consensus 41 ~lh~~~~~~~~ee~~had~laeri~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~------ 113 (149)
T 1n1q_A 41 TLHEKFEELYTEASGHIDTLAERVLSIGGSPIATLAASLEEASIKEATGGE-SAAEMVSSVVNDFVDLVGELKV------ 113 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHH------
Confidence 344445567889999999999999999976 222 12111112 1222212 22222223332222
Q ss_pred CHHHHHHHHhCCChhHHHHHHHHHHhHhhhHh
Q 016349 264 GPRLTQKLIGFGDHRTSNIVARIADEEVAHVA 295 (391)
Q Consensus 264 tP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa 295 (391)
.++-....||..|.++|+-|..||-.|+-
T Consensus 114 ---~i~~a~~~~D~~T~~ll~~~l~e~ek~~w 142 (149)
T 1n1q_A 114 ---ARDVADEADDEATADMLDAIEAGLEKHVW 142 (149)
T ss_dssp ---HHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 45555678999999999999999999973
No 57
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=88.13 E-value=3.1 Score=41.34 Aligned_cols=105 Identities=14% Similarity=0.228 Sum_probs=70.0
Q ss_pred HHHHHHHhhHHHHHHHHHH------------------hCCCCCC--CccchhhHHHHHhhhhcHHHHHhhchhhHhhcCC
Q 016349 202 HVADDESRHFAWCSQRLAE------------------LGFKYGD--MPAHDVLWNQCKKSSDNVAARLAVIPLVQEARGL 261 (391)
Q Consensus 202 ~VA~DEarHF~Ll~~RL~e------------------LG~~YGD--lPaH~gLWe~a~~T~~dllaRlAvVp~vlEARGL 261 (391)
+...||.||-.+|++.|.- -|++-|. =|.+.-.+-++++++..+..|
T Consensus 113 ~WtaEEnrHg~aL~~YL~lsgrvDp~~lE~~~~~~i~~Gfd~~~~~~p~~~~vy~sfQE~AT~vsh~------------- 179 (338)
T 2uw1_A 113 AWTAEENRHGDLLNKYLYLSGRVDMRKIEKTIQYLIGSGMDIKSENSPYLGFIYTSFQERATFISHA------------- 179 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHCCCCCCTTCHHHHHHHHHHHHHHHHHHHH-------------
T ss_pred hHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-------------
Confidence 4578999999999987772 4666543 266666666666554433222
Q ss_pred CCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHcCCCchHHHHHHHH-hc
Q 016349 262 DAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKMKRAPCSTFKDLLK-EY 323 (391)
Q Consensus 262 DvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~g~dp~~tf~~lv~-~~ 323 (391)
.+.+.-...||..-++|+.+|-.||..|-.+=.+-++.+-+..+......|.+.++ ++
T Consensus 180 ----n~~r~A~~~gdPvLa~i~~~IA~DE~RH~~~Y~~~v~~~le~dpd~~~~Aia~vm~~~~ 238 (338)
T 2uw1_A 180 ----NTAKLAQHYGDKKLAHICGSIASDEKRHATAYTKIVEKLAEIDPDTTVIAFADMMRKKI 238 (338)
T ss_dssp ----HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
T ss_pred ----HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCchhHHHHHHHHHHhcC
Confidence 11222245699999999999999999999886666666655443333456777774 55
No 58
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=87.68 E-value=0.5 Score=39.25 Aligned_cols=55 Identities=31% Similarity=0.472 Sum_probs=47.0
Q ss_pred CCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHcCCCchHHHHHHHHhc
Q 016349 261 LDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKMKRAPCSTFKDLLKEY 323 (391)
Q Consensus 261 LDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~g~dp~~tf~~lv~~~ 323 (391)
|++---+.++.....|....+||.-|-+||+.||+--..|++++ || .|.+-++.|
T Consensus 31 leAI~~Y~q~a~~~~d~~~k~vl~~i~~EEkeH~g~~lelLrr~------Dp--~~~~~l~~y 85 (95)
T 3k6c_A 31 LEAVDLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRC------DP--AFDKELKDY 85 (95)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT------CH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CH--HHHHHHHHH
Confidence 45555699999999999999999999999999999999999985 44 566667776
No 59
>2d5k_A DPS, DPS family protein; four helix bundle, metal binding protein; 1.85A {Staphylococcus aureus subsp}
Probab=86.68 E-value=3.9 Score=34.87 Aligned_cols=89 Identities=9% Similarity=0.115 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------CccchhhHHHHHhhhh-cHHHHHhhchhhHhhcCCCCC
Q 016349 196 FFADFAHVADDESRHFAWCSQRLAELGFK-YGD---------MPAHDVLWNQCKKSSD-NVAARLAVIPLVQEARGLDAG 264 (391)
Q Consensus 196 Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------lPaH~gLWe~a~~T~~-dllaRlAvVp~vlEARGLDvt 264 (391)
+..=+-+.+.||..|+-.+.+|+..||.. .|. ++.-..=| .+.+.-. ++..--.++-.+-|
T Consensus 41 lh~~~~~~~~ee~~had~iaERI~~lGg~p~~~~~~~~~~s~i~~~~~~~-~~~e~l~~~l~~e~~~~~~~~~------- 112 (156)
T 2d5k_A 41 LHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGY-SAEQMVEELSQDFTNISKQLEN------- 112 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCSCC-CHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHH-------
Confidence 34444457888999999999999999976 333 22111112 2222222 22222233332222
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 265 PRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 265 P~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
+++.-...||..|.++|+-|+.||-.|+
T Consensus 113 --~i~~a~~~~D~~T~~ll~~~l~e~Ek~~ 140 (156)
T 2d5k_A 113 --AIEIAGNAGDDVSEDMFIGMQTSVDKHN 140 (156)
T ss_dssp --HHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4555566799999999999999999996
No 60
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=86.04 E-value=1.4 Score=36.58 Aligned_cols=51 Identities=29% Similarity=0.471 Sum_probs=43.5
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHcCCCchHHHHHHHHhc
Q 016349 265 PRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKMKRAPCSTFKDLLKEY 323 (391)
Q Consensus 265 P~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~g~dp~~tf~~lv~~~ 323 (391)
-.+.++.....|.+..+||.-|-+||+.||+--.+|++++ || .+.+.++.|
T Consensus 35 ~~Y~q~A~~t~D~evk~vl~~iadEEkeH~g~~l~~Lrr~------dp--~~~~~l~~y 85 (95)
T 1zpy_A 35 DLYNQRVNACKDKELKAILAHNRDEEKEHAAMLLEWIRRC------DP--AFDKELKDY 85 (95)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT------CH--HHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CH--HHHHHHHHH
Confidence 3589999999999999999999999999999999999996 33 345556666
No 61
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=85.98 E-value=20 Score=32.55 Aligned_cols=129 Identities=18% Similarity=0.088 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCC--CCccchhhHH
Q 016349 161 AYMLHNLAHVELNAIDLAW--DTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYG--DMPAHDVLWN 236 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAw--D~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YG--DlPaH~gLWe 236 (391)
...|-.-.+-|+.|++... -..++--+ ++ +.-.=|-.+|.+|..|-.++.++|..+|...= ..|+.. |
T Consensus 30 ~~nL~~a~~gE~~a~~~Y~~~A~~A~~eG----~~-~iA~~F~~~A~~E~~HA~~~~~~l~~l~~~~~i~~~p~~~--~- 101 (202)
T 1yuz_A 30 LENLKAAIAGETGAHAKYTAFAKAAREQG----YE-QIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPS--A- 101 (202)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT----CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCC--CC--C-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCC----cH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCccC--C-
Confidence 3455566677888888733 23334332 22 23334456899999999999999999876521 113311 1
Q ss_pred HHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHH
Q 016349 237 QCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 237 ~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~ 307 (391)
..|...|. .|+-.=..| .-+.=|.+++.-+..||..++..|+.|..+|..|-. ||+.+-++
T Consensus 102 --gst~enL~--~a~~gE~~E--~t~my~~~a~~A~eEgd~~~a~~f~~i~~~E~~H~~----~~~~ll~~ 162 (202)
T 1yuz_A 102 --YSCDLNLI--SGANGEIYE--TSDMYPAFIRKAQEEGNSKAVHVFTRAKLAESVHAE----RYLAAYND 162 (202)
T ss_dssp --CCHHHHHH--HHHHHHHHH--HHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH----HHHHHHHT
T ss_pred --CCHHHHHH--HHHHhHHHH--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 12322222 222221122 224557889999999999999999999999999963 45555443
No 62
>2o1z_A Ribonucleotide reductase subunit R2; small subunit ribonucleotide reductase, oxidoreductase, DNA replication, iron, DIIRON, radical, R2 subunit; 2.40A {Plasmodium vivax}
Probab=85.87 E-value=3.6 Score=39.72 Aligned_cols=100 Identities=11% Similarity=-0.035 Sum_probs=66.8
Q ss_pred HHHHHHHhhHHHHHHHHHHhCCCCCCCccchhhHHHHH----------------hhhhcHHHHHhhchhhHhhcCCCCCH
Q 016349 202 HVADDESRHFAWCSQRLAELGFKYGDMPAHDVLWNQCK----------------KSSDNVAARLAVIPLVQEARGLDAGP 265 (391)
Q Consensus 202 ~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gLWe~a~----------------~T~~dllaRlAvVp~vlEARGLDvtP 265 (391)
..+.+|+.|-..+..-|..++. |-+--+.++++.. ++..+++.++...- ++|+-=+=.+=
T Consensus 124 ~q~~~E~iHs~sYs~il~tl~~---d~~e~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~lva~~-~lEGi~fysgF 199 (311)
T 2o1z_A 124 FQIAVENIHSETYSLLIDNYIK---DEKERMNLFHAIENIPAVKNKALWAAKWINDTNSFAERIVANA-CVEGILFSGSF 199 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHTTSHHHHHHHHHHHHHSSTTSCHHHHHHHHH-HHHHTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCC---CHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCccHHHHHHHHHH-HHHHHHHHHHH
Confidence 4678999999999999999873 2222222333211 12235666665543 67775544443
Q ss_pred HHHHHHHhCCCh-hHHHHHHHHHHhHhhhHhhhhHHHHHHH
Q 016349 266 RLTQKLIGFGDH-RTSNIVARIADEEVAHVAVGVHWFLSVC 305 (391)
Q Consensus 266 ~~i~kl~~~GD~-~sa~IL~iI~~DEI~HVa~G~rWF~~lC 305 (391)
..+--|...|-. -++.+++-|.+||.-|+.+|..=|+.+.
T Consensus 200 ~~~~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~ 240 (311)
T 2o1z_A 200 CAIFWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLE 240 (311)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445566777755 4688999999999999999987777765
No 63
>2p1i_A Ribonucleotide reductase, small chain; F222 twinning, plasmodb PY03671, S genomics consortium, SGC, oxidoreductase; 2.70A {Plasmodium yoelii yoelii}
Probab=85.83 E-value=2.4 Score=41.65 Aligned_cols=104 Identities=10% Similarity=-0.037 Sum_probs=67.6
Q ss_pred HHHHHHHhhHHHHHHHHHHhCCC-------CCCCccchhhHHHHH------hhhhcHHHHHhhchhhHhhcCCCCCHHHH
Q 016349 202 HVADDESRHFAWCSQRLAELGFK-------YGDMPAHDVLWNQCK------KSSDNVAARLAVIPLVQEARGLDAGPRLT 268 (391)
Q Consensus 202 ~VA~DEarHF~Ll~~RL~eLG~~-------YGDlPaH~gLWe~a~------~T~~dllaRlAvVp~vlEARGLDvtP~~i 268 (391)
..+.+|+.|-..+..-|..+|.+ |-..--...|-+.+. ++..+++.++... .++|+-=+=.+=.++
T Consensus 125 ~q~~~E~iHs~sYs~il~tl~~d~~e~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~lva~-~~lEGi~FysgF~~~ 203 (349)
T 2p1i_A 125 FQIAVENIHSETYSLLIDNYIKDEKERLNLFHAIENIPAIKNKALWAAKWINDTNSFAERIVAN-ACVEGILFSGSFCAI 203 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSHHHHHHTTHHHHSCHHHHHHHHHHHHTSSCSSCHHHHHHHH-HHHTTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCchHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 46789999999999999999853 221111111211111 1113566666555 567765443333345
Q ss_pred HHHHhCCCh-hHHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 269 QKLIGFGDH-RTSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 269 ~kl~~~GD~-~sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
--|.+.|-. -++.+++-|.+||.-|+.+|..=|+.+.+
T Consensus 204 ~~l~~~g~m~g~~~~i~~I~RDE~~H~~f~~~l~~~l~~ 242 (349)
T 2p1i_A 204 FWFKKQNKLHGLTFSNELISRDEGLHTDFNCLIYSLLEN 242 (349)
T ss_dssp HHHHTTTCSTTHHHHHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 567777755 46889999999999999999877777654
No 64
>3n37_A Ribonucleoside-diphosphate reductase 2 subunit BE; ribonucleotide reductase, four-helix bundle, dimanganese CLU oxidoreductase; 1.65A {Escherichia coli} PDB: 3n38_A 3n39_B* 3n3a_B* 3n3b_B* 1r2f_A 2bq1_I* 2r2f_A
Probab=84.72 E-value=4.5 Score=39.07 Aligned_cols=143 Identities=12% Similarity=0.083 Sum_probs=84.6
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCc
Q 016349 154 NSGLPLNAYMLHNLAHVELNAIDL--AWDTVVRFSPFTDILE--DGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMP 229 (391)
Q Consensus 154 ~~~~~~ra~lLHaiAHIElnAIDL--AwD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlP 229 (391)
..+...|-...|.++=. .+.|- +-..+-+|...- ..| +.||.- .+..|+.|-..+..-|..+|.. |
T Consensus 47 ~Lt~~Er~~~~~~l~~~--~~~D~iq~~~~~~~~~~~~-~~pe~~~~~~~---q~~~E~iHs~sYs~il~tl~~~----~ 116 (319)
T 3n37_A 47 TLTVVEQQLTMRVFTGL--TLLDTLQNVIGAPSLMPDA-LTPHEEAVLSN---ISFMEAVHARSYSSIFSTLCQT----K 116 (319)
T ss_dssp TSCHHHHHHHHHHHHHH--HHHHHHHHHTHHHHHGGGC-SSHHHHHHHHH---HHHHHHHHHHHHHHHHHHHSCH----H
T ss_pred hCCHHHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHHc-CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCC----H
Confidence 35556677777777743 22221 111112232110 113 345554 4789999999999999999863 2
Q ss_pred cchhhHHHHHhhhhcHHHHHhhc---------------hhhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHHHHHhHhhh
Q 016349 230 AHDVLWNQCKKSSDNVAARLAVI---------------PLVQEARGLDAGPRLTQKLIGFGDH-RTSNIVARIADEEVAH 293 (391)
Q Consensus 230 aH~gLWe~a~~T~~dllaRlAvV---------------p~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~iI~~DEI~H 293 (391)
--+.+++... +...+..|...+ -.++|+-=+=.+=.++--|.+.|-. -++.+++-|.+||.-|
T Consensus 117 e~~~~f~~i~-~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEgi~Fys~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~H 195 (319)
T 3n37_A 117 DVDAAYAWSE-ENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVH 195 (319)
T ss_dssp HHHHHHHHHH-HCHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-hCHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHhHHHH
Confidence 2223444322 223333333333 3455554444343444456666754 4688999999999999
Q ss_pred HhhhhHHHHHHHHH
Q 016349 294 VAVGVHWFLSVCQK 307 (391)
Q Consensus 294 Va~G~rWF~~lC~~ 307 (391)
+.+|...|+.+.++
T Consensus 196 ~~f~~~l~~~~~~~ 209 (319)
T 3n37_A 196 GYYIGYKYQKNMEK 209 (319)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998765
No 65
>3dhz_A Ribonucleotide reductase subunit R2F; metal free, hydrogen bond, metal binding protein; 1.63A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1kgo_A 1kgp_A 1oqu_A 1kgn_A
Probab=84.32 E-value=4.7 Score=39.19 Aligned_cols=142 Identities=15% Similarity=0.093 Sum_probs=84.5
Q ss_pred CCchhhHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCcc
Q 016349 155 SGLPLNAYMLHNLAHVELNAIDL--AWDTVVRFSPFTDILE--DGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPA 230 (391)
Q Consensus 155 ~~~~~ra~lLHaiAHIElnAIDL--AwD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPa 230 (391)
.+...|-.+.|.++=. .+.|- +-+.+-+|...- ..| +.||.- .+..|+.|-..+..-|..+|.. |-
T Consensus 58 Lt~~Er~~~~~~l~~~--~~~D~iq~~~~~~~~~~~~-~~pE~~~~~~~---q~~~E~iHs~sYs~il~tl~~~----~e 127 (329)
T 3dhz_A 58 MTPQEQLATMRVFTGL--TLLDTIQGTVGAISLLPDA-ETMHEEAVYTN---IAFMESVHAKSYSNIFMTLAST----PQ 127 (329)
T ss_dssp SCHHHHHHHHHHHHHH--HHHHHHHHHTHHHHTGGGC-SSHHHHHHHHH---HHHHHHHHHHHHHHHHHHHSCH----HH
T ss_pred CCHHHHHHHHHHHHHH--HHHHHHHHHHhHHHHHHHc-CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHhCCC----HH
Confidence 5555677777777743 22222 111122332110 113 345554 4789999999999999999863 22
Q ss_pred chhhHHHHHhhhhcHHHHHhhc---------------hhhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHHHHHhHhhhH
Q 016349 231 HDVLWNQCKKSSDNVAARLAVI---------------PLVQEARGLDAGPRLTQKLIGFGDH-RTSNIVARIADEEVAHV 294 (391)
Q Consensus 231 H~gLWe~a~~T~~dllaRlAvV---------------p~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~iI~~DEI~HV 294 (391)
-+.+++... +...+..|...+ -.++|+-=+=.+=.++--|.+.|-. -++.+++-|.+||.-|+
T Consensus 128 ~~~~f~~i~-~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~ 206 (329)
T 3dhz_A 128 INEAFRWSE-ENENLQRKAKIIMSYYNGDDPLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHG 206 (329)
T ss_dssp HHHHHHHHH-HCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHTTTHHHHHHHHHHHTTTSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-hCHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHH
Confidence 223444322 222333333333 3455554444333444456666654 46889999999999999
Q ss_pred hhhhHHHHHHHHH
Q 016349 295 AVGVHWFLSVCQK 307 (391)
Q Consensus 295 a~G~rWF~~lC~~ 307 (391)
.+|...|+.+.++
T Consensus 207 ~f~~~l~~~~~~~ 219 (329)
T 3dhz_A 207 YYIGYKYQQGVKK 219 (329)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998765
No 66
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=84.28 E-value=5 Score=34.22 Aligned_cols=117 Identities=13% Similarity=0.074 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhC----CCC-CCCccch--hhHHHHHh-
Q 016349 169 HVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELG----FKY-GDMPAHD--VLWNQCKK- 240 (391)
Q Consensus 169 HIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG----~~Y-GDlPaH~--gLWe~a~~- 240 (391)
.+|..+++......- .. -.+.-.=|.+.|.+|.+|..++.+.....- ..| ..++.-. +-|.....
T Consensus 24 ~~E~~~~~~Y~~lA~--~~-----~~~~k~lF~~LA~eE~~H~~~l~~l~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~~ 96 (157)
T 1vjx_A 24 RLEEEGERFYRELSE--HF-----NGEIKKTFLELADQERIHAEIFRKMSDQENWDEVDSYLAGYAFYEVFPDTSEILRR 96 (157)
T ss_dssp HHHHHHHHHHHHHTT--SC-----CSHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTCBCCSBCCCCCCCCCTTGGGC
T ss_pred HHHHHHHHHHHHHHH--cC-----CHHHHHHHHHHHHHHHHHHHHHHHhhccCcchhHHHHHHhhhhhhccchhhhhhcc
Confidence 568888887664433 22 224455567799999999999999854210 001 0111111 11222100
Q ss_pred hhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhh
Q 016349 241 SSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAV 296 (391)
Q Consensus 241 T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~ 296 (391)
...++ ..+--+-+-.|....+ .+.+-.....|....+++..|..||-+|+..
T Consensus 97 ~~~~~-~~~l~~ai~~E~~a~~---~Y~~~a~~~~d~~~k~l~~~la~eE~~H~~~ 148 (157)
T 1vjx_A 97 KDLTL-KEVLDIAISVEKDSII---LYYELKDGLVNSDAQKTVKKIIDQEKEHLRK 148 (157)
T ss_dssp SCCCH-HHHHHHHHHHHHHHHH---HHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCH-HHHHHHHHHHHHHHHH---HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00111 1222223344555444 4555666688999999999999999999874
No 67
>1z6o_A Ferritin light chain; metal binding protein, iron storage; 1.91A {Trichoplusia NI} SCOP: a.25.1.1
Probab=82.96 E-value=23 Score=32.30 Aligned_cols=69 Identities=16% Similarity=0.128 Sum_probs=52.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC--CCCCc
Q 016349 160 NAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK--YGDMP 229 (391)
Q Consensus 160 ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~--YGDlP 229 (391)
-...|....+.||.|+++.+-+..=|....-++| .|..=|-+.+.||-.|...|.+++..+|.. +.+++
T Consensus 37 v~~~LN~qin~El~As~~Yl~ma~~f~~dd~~l~-gfa~~f~~~s~EE~~HA~kli~yi~~rGg~~~l~~i~ 107 (212)
T 1z6o_A 37 VATELQAYAKLHLERSYDYLLSAAYFNNYQTNRA-GFSKLFKKLSDEAWSKTIDIIKHVTKRGDKMNFDQHS 107 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTTCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccccccc
Confidence 4688999999999999998877666753112343 444445568999999999999999999976 44443
No 68
>3pf7_A Benzoyl-COA oxygenase component B; DIIRON center, epoxidase, benzoyl coenzyme A, oxidoreductase; 1.90A {Azoarcus evansii} PDB: 3per_A 3pm5_A* 3q1g_A
Probab=82.68 E-value=18 Score=37.41 Aligned_cols=124 Identities=18% Similarity=0.125 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHH-HHHHHHHHHHHhhHHHHHHHH-HHhCCC------------CC
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFF-ADFAHVADDESRHFAWCSQRL-AELGFK------------YG 226 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy-~Dwl~VA~DEarHF~Ll~~RL-~eLG~~------------YG 226 (391)
..+|..-||-|+-.+.---+.+-+=+ --+- .-.+++..||.+|...+...| +.+|.+ .|
T Consensus 110 iRlI~~haDSEiagve~e~~wi~~AP-------SL~~k~~L~aiVqDE~gHg~~mlyllae~fG~Dr~e~ad~LL~R~sG 182 (481)
T 3pf7_A 110 RRIIVTQGDTEPASVEQQRHLGLTAP-------SLYDLRNLFQVNVEEGRHLWAMVYLLHAHFGRDGREEGEALLERRSG 182 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHTTGGGGCS-------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHhhhHHhhchhhhhHHhcCC-------CHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHHHHHhhccC
Confidence 34445567889888877444433322 2221 356788999999997555555 666643 45
Q ss_pred CC--c----cc---hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhh
Q 016349 227 DM--P----AH---DVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVG 297 (391)
Q Consensus 227 Dl--P----aH---~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G 297 (391)
|. | +- --=|-.+-- ..=|..|-+++. +.-|....=.--+.++..|+.||.-|+..|
T Consensus 183 d~~~pk~L~~FNyPt~~WaD~~~-f~~LvDrAgi~q--------------L~~L~~sSY~PlARamr~I~kEEafH~~~G 247 (481)
T 3pf7_A 183 DEDNPRILTAFNEKTPDWLSFFM-FTFITDRDGKFQ--------------LASLAESAFDPLARTCKFMLTEEAHHLFVG 247 (481)
T ss_dssp CSSSCCSSGGGSSCCCSHHHHHH-HHHHTHHHHHHH--------------HHHHTTCSBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccccccccccCCCCCHHHHHH-HHHhhhHHHHHH--------------HHHHHhCCcHHHHHHHHHHhhHHHHHHHHH
Confidence 42 1 11 111322221 123334444433 223344444456788999999999999999
Q ss_pred hHHHHHHHH
Q 016349 298 VHWFLSVCQ 306 (391)
Q Consensus 298 ~rWF~~lC~ 306 (391)
-.|+..+|+
T Consensus 248 e~gl~rli~ 256 (481)
T 3pf7_A 248 ESGIARVIQ 256 (481)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999965
No 69
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=82.07 E-value=2.8 Score=37.35 Aligned_cols=115 Identities=15% Similarity=0.041 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHH--HHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhhHHHHHh
Q 016349 163 MLHNLAHVELNAIDLAW--DTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVLWNQCKK 240 (391)
Q Consensus 163 lLHaiAHIElnAIDLAw--D~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gLWe~a~~ 240 (391)
.|-.--.-|.+|++-.+ --+++=-+ +| +.-.=|-+.|.+|..|-..+.++|.. .| .
T Consensus 10 nL~~afagEs~A~~~Y~~~A~~A~~eG----~~-~iA~~F~~~A~~E~~HA~~~~~~L~~----i~-------------~ 67 (170)
T 3pwf_A 10 FLEEAFAGESMAHMRYLIFAEKAEQEG----FP-NIAKLFRAIAYAEFVHAKNHFIALGK----LG-------------K 67 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT----CH-HHHHHHHHHHHHHHHHHHHHHHHTTC----CC-------------C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC----HH-HHHHHHHHHHHHHHHHHHHHHHHHcC----CC-------------C
Confidence 34343445888988643 33333322 33 34444567899999999999888632 22 2
Q ss_pred hhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHH
Q 016349 241 SSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 241 T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~ 307 (391)
|...|...++. -..|. -+.-|.+++.-+.-||..++.+++.|..+|-.|. .||+.+-+.
T Consensus 68 t~enL~~a~~g--E~~e~--~~mY~~~a~~A~eeg~~~~a~~f~~i~~~E~~H~----~~~~~~l~~ 126 (170)
T 3pwf_A 68 TPENLQMGIEG--ETFEV--EEMYPVYNKAAEFQGEKEAVRTTHYALEAEKIHA----ELYRKAKEK 126 (170)
T ss_dssp HHHHHHHHHHH--HHHHH--HTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH----HHHHHHHHH
T ss_pred hHHHHHHHHHh--HHHHH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 44444433332 22221 3456788999999999999999999999999997 456655443
No 70
>3mjo_A Ribonucleotide reductase subunit R2F; Mn ribonucleotide reductase, RNR, radical enzyme, split SIGN metallocofactor; 1.36A {Corynebacterium ammoniagenes} SCOP: a.25.1.2 PDB: 1uzr_A*
Probab=81.64 E-value=4.4 Score=38.83 Aligned_cols=142 Identities=15% Similarity=0.086 Sum_probs=81.8
Q ss_pred CCchhhHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCcc
Q 016349 155 SGLPLNAYMLHNLAHVELNAIDL--AWDTVVRFSPFTDILE--DGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPA 230 (391)
Q Consensus 155 ~~~~~ra~lLHaiAHIElnAIDL--AwD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPa 230 (391)
.+...|-...|.++=. .+.|- +-+.+-+|...- .-| +.||.- .+..|+.|-..+..-|..+|.. |-
T Consensus 57 Ls~~Er~~~~~~l~~~--~~~D~iq~~~~~~~~~~~~-~~pe~~~~~~~---q~~~E~iHs~sYs~il~tl~~~----~e 126 (296)
T 3mjo_A 57 MTPQEQLATMRVFTGL--TLLDTIQGTVGAISLLPDA-ETMHEEAVYTN---IAFMESVHAKSYSNIFMTLAST----PQ 126 (296)
T ss_dssp SCHHHHHHHHHHHHHH--HHHHHHHHHTHHHHHGGGC-SSHHHHHHHHH---HHHHHHHHHHHHHHHHHHHSCH----HH
T ss_pred CCHHHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHhc-CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHhCCC----HH
Confidence 4555677777776643 22222 111122332110 113 345555 4789999999999999999853 22
Q ss_pred chhhHHHHHhhhhcHHHHHhhch---------------hhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHHHHHhHhhhH
Q 016349 231 HDVLWNQCKKSSDNVAARLAVIP---------------LVQEARGLDAGPRLTQKLIGFGDH-RTSNIVARIADEEVAHV 294 (391)
Q Consensus 231 H~gLWe~a~~T~~dllaRlAvVp---------------~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~iI~~DEI~HV 294 (391)
-+.+++... +...+..|...+- .++|+-=+=.+=.++--|.+.|-. -++.+++-|.+||--|+
T Consensus 127 ~~~~f~~i~-~~p~l~~K~~~i~~~~~~~~~~~~~va~~~lEGi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~ 205 (296)
T 3mjo_A 127 INEAFRWSE-ENENLQRKAKIIMSYYNGDDPLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIRLIIRDESVHG 205 (296)
T ss_dssp HHHHHHHHH-HCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHTHHHHHTHHHHHHHHTTSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHH
Confidence 234554322 2234444444333 344442222222233345566655 45789999999999999
Q ss_pred hhhhHHHHHHHHH
Q 016349 295 AVGVHWFLSVCQK 307 (391)
Q Consensus 295 a~G~rWF~~lC~~ 307 (391)
.+|...|+.+.++
T Consensus 206 ~f~~~l~~~l~~~ 218 (296)
T 3mjo_A 206 YYIGYKYQQGVKK 218 (296)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998765
No 71
>1h0o_A Ribonucleoside-diphosphate reductase; oxidoreductase, ribonucleotide reductase, dinuclear metal-cluster; 2.2A {Mus musculus} SCOP: a.25.1.2 PDB: 1h0n_A 1w68_A 1w69_A 1xsm_A 2uw2_A 3hf1_A 2vux_A
Probab=80.87 E-value=2.2 Score=42.69 Aligned_cols=145 Identities=14% Similarity=0.050 Sum_probs=81.0
Q ss_pred CCchhhHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC------
Q 016349 155 SGLPLNAYMLHNLAHVELNAIDL--AWDTVVRFSPFTDILE--DGFFADFAHVADDESRHFAWCSQRLAELGFK------ 224 (391)
Q Consensus 155 ~~~~~ra~lLHaiAHIElnAIDL--AwD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~------ 224 (391)
.+..+|-+..|.++-. .+.|- +-+.+-||...- ..| +.||. ..+..|+.|-..+..-|..+|.+
T Consensus 120 Lt~~Er~~~~~vla~f--a~~Dsiv~~nl~~~~~~~v-~~pE~~~~~~---~Q~~~EaiHsesYS~il~tl~~d~~e~~~ 193 (390)
T 1h0o_A 120 LKPDERHFISHVLAFF--AASDGIVNENLVERFSQEV-QVTEARCFYG---FQIAMENIHSEMYSLLIDTYIKDPKEREY 193 (390)
T ss_dssp SCHHHHHHHHHHHHHH--HHHHHHHHHHHHHTHHHHC-CCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhC-CcHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 3444566666766644 33332 122223443210 123 23333 34567999999999999998863
Q ss_pred -CCCCccchhhHHHH-------HhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHHHHHhHhhhHh
Q 016349 225 -YGDMPAHDVLWNQC-------KKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDH-RTSNIVARIADEEVAHVA 295 (391)
Q Consensus 225 -YGDlPaH~gLWe~a-------~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~iI~~DEI~HVa 295 (391)
|-...-...|-+.+ .++..+++.++... .++|+-=+=.+=..+--|...|-. -++.+++-|.+||.-|+.
T Consensus 194 if~~~~~~p~l~~Ka~~i~~~~~~~~~~~~~~lva~-~~lEGi~Fys~F~~~~~l~~rg~MpG~~~~i~lI~RDE~lH~~ 272 (390)
T 1h0o_A 194 LFNAIETMPCVKKKADWALRWIGDKEATYGERVVAF-AAVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGLHCD 272 (390)
T ss_dssp HHTHHHHCHHHHHHHHHHHHHHHCSSSCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHhccchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHH
Confidence 21111111111111 11224566666655 457764432222233456666755 468899999999999999
Q ss_pred hhhHHHHHHHH
Q 016349 296 VGVHWFLSVCQ 306 (391)
Q Consensus 296 ~G~rWF~~lC~ 306 (391)
+|..=|+.+.+
T Consensus 273 f~~~l~~~l~~ 283 (390)
T 1h0o_A 273 FACLMFKHLVH 283 (390)
T ss_dssp HHHHHHHTCSS
T ss_pred HHHHHHHHhhc
Confidence 99877776543
No 72
>1tjo_A Iron-rich DPSA-homolog protein; ferritin, low-iron, metal binding protein; 1.60A {Halobacterium salinarum} SCOP: a.25.1.1 PDB: 1moj_A 1tk6_A 1tko_A 1tkp_A
Probab=80.46 E-value=7.6 Score=34.13 Aligned_cols=85 Identities=15% Similarity=0.101 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------C---ccc-hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCC
Q 016349 198 ADFAHVADDESRHFAWCSQRLAELGFK-YGD---------M---PAH-DVLWNQCKKSSDNVAARLAVIPLVQEARGLDA 263 (391)
Q Consensus 198 ~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------l---PaH-~gLWe~a~~T~~dllaRlAvVp~vlEARGLDv 263 (391)
.=+-+.+.||..|+-.+.+|+..||.. .+. + |.. ...=++.. .++..--.++-.+-|
T Consensus 65 ~~~ee~~~e~~~haD~laERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~e~l~---~~l~~e~~~i~~~r~------ 135 (182)
T 1tjo_A 65 LFLGEAAETAEEVADELAERVQALGGVPHASPETLQAEASVDVEDEDVYDIRTSLA---NDMAIYGDIIEATRE------ 135 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCSSBCCHHHHHH---HHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhCCCCCCCCCCCCHHHHHH---HHHHHHHHHHHHHHH------
Confidence 334457788899999999999999875 121 1 221 11112222 122222233332222
Q ss_pred CHHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 264 GPRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 264 tP~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.-...||..|+++|+-|+.+|-.|+
T Consensus 136 ---~i~~a~e~~D~~T~dll~~~l~~~Ek~~ 163 (182)
T 1tjo_A 136 ---HTELAENLGDHATAHMLREGLIELEDDA 163 (182)
T ss_dssp ---HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHhHCCCHHHHHHHHHHHHHHHHHH
Confidence 4556678999999999999999999886
No 73
>2chp_A MRGA, metalloregulation DNA-binding stress protein; DNA-binding protein, DPS, dodecameric, ferritin; 2.0A {Bacillus subtilis}
Probab=80.44 E-value=15 Score=31.36 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=54.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CC------------CCccchhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YG------------DMPAHDVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPR 266 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YG------------DlPaH~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~ 266 (391)
+-+.+.+|..|+-.+.+|+..||.. .| +.|.....=+|. ..++..--.++-.+-|
T Consensus 50 ~ee~~~e~~~~~D~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~eml---~~~l~~~~~~i~~~r~--------- 117 (153)
T 2chp_A 50 FEELYDHAAETVDTIAERLLAIGGQPVATVKEYTEHASITDGGNETSASEMV---QALVNDYKQISSESKF--------- 117 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCSCCCCCSHHHHH---HHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCHHHHH---HHHHHHHHHHHHHHHH---------
Confidence 3456778889999999999999875 22 223221111221 1233333344443333
Q ss_pred HHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 267 LTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 267 ~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.....||..|+++|.-|+.++-.|+
T Consensus 118 ~i~~a~~~~D~~T~dll~~il~~~Ek~~ 145 (153)
T 2chp_A 118 VIGLAEENQDNATADLFVGLIEEVEKQV 145 (153)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHHHHHH
Confidence 4556678899999999999999998886
No 74
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=80.13 E-value=20 Score=32.12 Aligned_cols=120 Identities=18% Similarity=0.038 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC---CCCCccchhhHHHH
Q 016349 162 YMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK---YGDMPAHDVLWNQC 238 (391)
Q Consensus 162 ~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~---YGDlPaH~gLWe~a 238 (391)
..|-.--.-|+.|..+.+-...-+.. .++|. +-.=|-..|.+|..|...+.++|. |.. -+.-|+.. |.
T Consensus 11 ~~Ln~a~~~E~~A~~~Yl~~A~~a~~--~G~~~-iA~~f~~~A~eE~~HA~~~~~~l~--gg~~~i~~~~p~~~--~~-- 81 (191)
T 1lko_A 11 KNILTAFAGESQARNRYNYFGGQAKK--DGFVQ-ISDIFAETADQEREHAKRLFKFLE--GGDLEIVAAFPAGI--IA-- 81 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH--TTCHH-HHHHHHHHHHHHHHHHHHHHHHCC--SSCCCCCCCCCCCC--CC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--CCcHH-HHHHHHHHHHHHHHHHHHHHHHHc--CCCccccCcCCccc--cC--
Confidence 34444456799999986644333322 12332 223334578999999999999997 532 11224421 11
Q ss_pred HhhhhcHHHHHhhchhhHh-hcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhh
Q 016349 239 KKSSDNVAARLAVIPLVQE-ARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAV 296 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlE-ARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~ 296 (391)
.|.+.|- .|+ -+| ----+.=|.+++.-+..||..++..|+-|..+|+.|-..
T Consensus 82 -s~~e~l~--~al---~~E~~e~t~~y~~~~~~A~eegd~~~~~~f~~~~~~E~ehe~~ 134 (191)
T 1lko_A 82 -DTHANLI--ASA---AGEHHEYTEMYPSFARIAREEGYEEIARVFASIAVAEEFHEKR 134 (191)
T ss_dssp -CHHHHHH--HHH---HHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CHHHHHH--HHH---HhhHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 1211111 111 122 111133466888888999999999999999999999753
No 75
>1mxr_A Ribonucleotide reductase R2; radical protein, DI iron, oxidoreductase; 1.42A {Escherichia coli} SCOP: a.25.1.2 PDB: 1jpr_A 1jqc_A 1xik_A 3uus_E* 1yfd_A 1piy_A 1r65_A 2xof_A* 1biq_B* 1rsv_A 1piz_A 1piu_A 1pim_A 1rsr_A 1biq_A* 1rib_A 1mrr_A 1rnr_A* 1pj0_A 1pj1_A ...
Probab=79.69 E-value=3.1 Score=41.04 Aligned_cols=139 Identities=13% Similarity=0.089 Sum_probs=84.1
Q ss_pred CCchhhHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCcc
Q 016349 155 SGLPLNAYMLHNLAHVELNAIDL--AWDTVVRFSPFTDILE--DGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPA 230 (391)
Q Consensus 155 ~~~~~ra~lLHaiAHIElnAIDL--AwD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPa 230 (391)
.+...|-+..|.++-. .+.|- +-+.+-+|...-. .| ..||.-|. ..|+.|-+.+..-|..++.+=+
T Consensus 65 Lt~~Er~~~~~~l~~~--~~~Dsiv~~~~~~~~~~~v~-~pE~~~~l~~~~---~~E~iHs~sYs~il~tl~~~~~---- 134 (375)
T 1mxr_A 65 LPEHEKHIFISNLKYQ--TLLDSIQGRSPNVALLPLIS-IPELETWVETWA---FSETIHSRSYTHIIRNIVNDPS---- 134 (375)
T ss_dssp SCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHTGGGBC-SHHHHHHHHHHH---HHHHHHHHHHHHHHHTTCSCHH----
T ss_pred CCHHHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHhCC-cHHHHHHHHHHH---HHHHHHHHHHHHHHHHHCCCHH----
Confidence 4555677777877754 44443 1122234432211 13 23666554 7999999999999999975311
Q ss_pred chhhHHHHHh----------------------------------------------hhhcHHHHHhhchhhHhhcCCCCC
Q 016349 231 HDVLWNQCKK----------------------------------------------SSDNVAARLAVIPLVQEARGLDAG 264 (391)
Q Consensus 231 H~gLWe~a~~----------------------------------------------T~~dllaRlAvVp~vlEARGLDvt 264 (391)
.++++... +..+++.++...- ++|+-=+=++
T Consensus 135 --e~f~~i~~~p~i~~Ka~~i~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lva~~-~lEgi~Fysg 211 (375)
T 1mxr_A 135 --VVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVN-ALEAIRFYVS 211 (375)
T ss_dssp --HHHHHHHHCHHHHHHHTTHHHHHHHHHHHHHHHHHHCSEEEEETTEEEEECHHHHHHHHHHHHHHHH-HHHHTHHHHH
T ss_pred --HHHHHHHhCHHHHHHHHHHHHHHHHHHHhhhhhhhccchhhcccccccccccchhHHHHHHHHHHHH-HHHHHHHHHH
Confidence 23333221 1123443433332 5665443333
Q ss_pred HHHHHHHHhCCChh-HHHHHHHHHHhHhhhHhhhhHHHHHHHH
Q 016349 265 PRLTQKLIGFGDHR-TSNIVARIADEEVAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 265 P~~i~kl~~~GD~~-sa~IL~iI~~DEI~HVa~G~rWF~~lC~ 306 (391)
=..+--|.+.|-.. ++++++-|.+||.-|+.+|..=|+.+.+
T Consensus 212 F~~~~~l~~~g~m~G~~~~i~lI~RDE~lH~~~~~~l~~~l~~ 254 (375)
T 1mxr_A 212 FACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRS 254 (375)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34445677778664 6889999999999999999988887776
No 76
>3iq1_A DPS family protein; csgid, SAD, niaid, metal transport, STRU genomics, center for structural genomics of infectious DISE; 1.67A {Vibrio cholerae o1 biovar el tor}
Probab=79.58 E-value=7.8 Score=33.34 Aligned_cols=87 Identities=16% Similarity=0.154 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------CccchhhHHHHHhhhh-cHHHHHhhchhhHhhcCCCCCHH
Q 016349 198 ADFAHVADDESRHFAWCSQRLAELGFK-YGD---------MPAHDVLWNQCKKSSD-NVAARLAVIPLVQEARGLDAGPR 266 (391)
Q Consensus 198 ~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------lPaH~gLWe~a~~T~~-dllaRlAvVp~vlEARGLDvtP~ 266 (391)
.=+-+.+.+|..|+-.+.+|+..||.. .|. ++-..+-+. +.++-. ++...-.++-.+-|
T Consensus 54 ~~~ee~~~~~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~-~~eml~~ll~~~~~~i~~~r~--------- 123 (159)
T 3iq1_A 54 AKFEEIYTDLQLKIDELAERILTLSARPMHSFSGYLKAAQIKEHTDSID-GRSSMQGLVDGFSILLHQQRD--------- 123 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSSCCCCCCCS-HHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCccCCCCC-HHHHHHHHHHHHHHHHHHHHH---------
Confidence 344567889999999999999999873 221 222222222 222222 22223333333333
Q ss_pred HHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 267 LTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 267 ~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.....||..|+++|.-|+.++-.|+
T Consensus 124 ~i~~ae~~~D~~T~dll~~~l~~~Ek~~ 151 (159)
T 3iq1_A 124 ILELAGETGDEGTSALMSDYIREQEKLV 151 (159)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHcCCHHHHHHHHHHHHHHHHHH
Confidence 4566677899999999999999988885
No 77
>1jk0_B RNR Y4, ribonucleoside-diphosphate reductase small chain 2; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1sms_A
Probab=79.05 E-value=4.2 Score=39.80 Aligned_cols=147 Identities=12% Similarity=-0.057 Sum_probs=85.9
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCC
Q 016349 153 KNSGLPLNAYMLHNLAHVELNAIDL--AWDTVVRFSPFTDILE--DGFFADFAHVADDESRHFAWCSQRLAELGFKYGDM 228 (391)
Q Consensus 153 k~~~~~~ra~lLHaiAHIElnAIDL--AwD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDl 228 (391)
+..+...|-+..|.++-. .+.|- .-+.+-+|...- .-| ..|| ...+..|+.|-..+..-|..+|.+=...
T Consensus 72 ~~Lt~~Er~~~~~~l~~~--~~~D~iv~~nl~~~l~~~v-~~~E~~~~~---~~q~~~E~iHs~sYs~il~tl~~~~~e~ 145 (345)
T 1jk0_B 72 QKLTDDQKTYIGNLLALS--ISSDNLVNKYLIENFSAQL-QNPEGKSFY---GFQIMMENIYSEVYSMMVDAFFKDPKNI 145 (345)
T ss_dssp TTSCTTHHHHHHHHHHHH--C---------CHHHHHHHS-CSHHHHHHH---HHHHHHHHHHHHHHHHHHHHHSCSCTTS
T ss_pred HHCCHHHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHHC-ChHHHHHHH---HHHHHHHHHHHHHHHHHHHHHCCCHHHH
Confidence 345556777788887754 33332 111111222110 012 2333 3467899999999999999998543221
Q ss_pred ------ccchhhHHHH-------HhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHHHHHhHhhhH
Q 016349 229 ------PAHDVLWNQC-------KKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDH-RTSNIVARIADEEVAHV 294 (391)
Q Consensus 229 ------PaH~gLWe~a-------~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~iI~~DEI~HV 294 (391)
--...|-+.+ .++..+++.++... .++|+-=+=.+=.++--|.+.|-. -++.+++-|.+||.-|+
T Consensus 146 ~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~~lva~-~~lEgi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE~lH~ 224 (345)
T 1jk0_B 146 PLFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAF-AAKEGIFQAGNYASMFWLTDKKIMPGLAMANRNICRDRGAYT 224 (345)
T ss_dssp CSGGGGCSCHHHHHHHHHHHHTTSSSSCCHHHHHHHH-HHHHHTTTHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHhCCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHH
Confidence 1111121111 11122377777665 678876555444455577777765 46889999999999999
Q ss_pred hhhhHHHHHHHH
Q 016349 295 AVGVHWFLSVCQ 306 (391)
Q Consensus 295 a~G~rWF~~lC~ 306 (391)
.+|..=|+.+.+
T Consensus 225 ~f~~~l~~~l~~ 236 (345)
T 1jk0_B 225 DFSCLLFAHLRT 236 (345)
T ss_dssp HHHHHHHHTCSS
T ss_pred HHHHHHHHHhcc
Confidence 999887777654
No 78
>1jk0_A RNR Y2, ribonucleoside-diphosphate reductase small chain 1; ribonucleotide reductase, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: a.25.1.2 PDB: 1smq_A
Probab=78.58 E-value=5 Score=40.61 Aligned_cols=138 Identities=17% Similarity=0.077 Sum_probs=81.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccc
Q 016349 156 GLPLNAYMLHNLAHVELNAIDL--AWDTVVRFSPFTDILE--DGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAH 231 (391)
Q Consensus 156 ~~~~ra~lLHaiAHIElnAIDL--AwD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH 231 (391)
+..+|-++.|.++=. .+.|- +-+.+-||...-. .| +.||. ..+..|+.|-..+..-|..++.+ |.-
T Consensus 147 t~~Er~~~~~vLa~f--a~~Dsiv~~nl~~~l~~~v~-~pE~~~~~~---~Q~~~EaIHsesYS~il~tl~~d----~~e 216 (419)
T 1jk0_A 147 NENERFFISRVLAFF--AASDGIVNENLVENFSTEVQ-IPEAKSFYG---FQIMIENIHSETYSLLIDTYIKD----PKE 216 (419)
T ss_dssp CHHHHHHHHHHHHHH--HTTSSHHHHHHCCCCCTSCC-CHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCC----HHH
T ss_pred CHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCC-cHHHHHHHH---HHHHHHHHHHHHHHHHHHHhCCC----HHH
Confidence 334455566665543 22221 1222345654311 12 23444 46678999999999999998753 110
Q ss_pred -hhhHHHHH----------h-------hhhcHHHHHhhchhhHhhcCCCCCHHH-HHHHHhCCCh-hHHHHHHHHHHhHh
Q 016349 232 -DVLWNQCK----------K-------SSDNVAARLAVIPLVQEARGLDAGPRL-TQKLIGFGDH-RTSNIVARIADEEV 291 (391)
Q Consensus 232 -~gLWe~a~----------~-------T~~dllaRlAvVp~vlEARGLDvtP~~-i~kl~~~GD~-~sa~IL~iI~~DEI 291 (391)
+.++++.. . ....++.++... .++|+-=+ .+-.. +--|.+.|-. -++.+++.|.+||.
T Consensus 217 ~~~iF~~i~~~p~L~~Ka~~i~~~~~~~~~~~~~~lva~-~~lEGI~f-sg~Fa~~~~l~~rg~MpG~~~~i~lI~RDE~ 294 (419)
T 1jk0_A 217 SEFLFNAIHTIPEIGEKAEWALRWIQDADALFGERLVAF-ASIEGVFF-SGSFASIFWLKKRGMMPGLTFSNELICRDEG 294 (419)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTTSSSCCHHHHHHHH-HHHHHTTT-HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHhccchhHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHcCCCccHHHHHHHHHHHHH
Confidence 12222211 1 112366666555 67887654 22333 4567777755 46889999999999
Q ss_pred hhHhhhhHHHHHHH
Q 016349 292 AHVAVGVHWFLSVC 305 (391)
Q Consensus 292 ~HVa~G~rWF~~lC 305 (391)
-|+.+|..=|+.+.
T Consensus 295 lH~~f~~~l~~~l~ 308 (419)
T 1jk0_A 295 LHTDFACLLFAHLK 308 (419)
T ss_dssp HHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhh
Confidence 99999987777653
No 79
>2fjc_A Antigen TPF1; mini ferritin, iron binding protein, metal transport; 2.50A {Treponema pallidum} SCOP: a.25.1.1
Probab=78.16 E-value=7.2 Score=33.45 Aligned_cols=83 Identities=12% Similarity=0.041 Sum_probs=53.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------C---ccc-hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YGD---------M---PAH-DVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGP 265 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------l---PaH-~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP 265 (391)
+-+.+.+|..|+-.+.+|+..||.. .|. + |.- ...=+|.. .++..--.++-.+-|
T Consensus 51 ~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~~~~~~~eml~---~~l~~~~~~i~~~r~-------- 119 (156)
T 2fjc_A 51 LEEYYVSVTEAFDTIAERLLQLGAQAPASMAEYLALSGIAEETEKEITIVSALA---RVKRDFEYLSTRFSQ-------- 119 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSEEHHHHHH---HHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhhCCCCCCCCCCCCHHHHHH---HHHHHHHHHHHHHHH--------
Confidence 4456778889999999999999865 221 1 211 01112211 223333333343333
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 266 RLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 266 ~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.....||..|+++|.-|+.++-.|+
T Consensus 120 -~i~~a~~~~D~~T~dll~~il~~~Ek~~ 147 (156)
T 2fjc_A 120 -TQVLAAESGDAVTDGIITDILRTLGKAI 147 (156)
T ss_dssp -HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHhhCCCHHHHHHHHHHHHHHHHHH
Confidence 4556677899999999999999999886
No 80
>3kwo_A Putative bacterioferritin; alpha-helix, bacterial ferritin fold, structural genomics, center for structural genomics of infectious diseases; 1.99A {Campylobacter jejuni} SCOP: a.25.1.0
Probab=78.05 E-value=8.7 Score=32.77 Aligned_cols=88 Identities=11% Similarity=0.079 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhCCC-CC---------CCcc-chhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHH
Q 016349 198 ADFAHVADDESRHFAWCSQRLAELGFK-YG---------DMPA-HDVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPR 266 (391)
Q Consensus 198 ~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YG---------DlPa-H~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~ 266 (391)
.=+-+.+.++..|+-.+.+|+..||.. .| .++- ..|.+..-+-...++-..-.++-.+-|
T Consensus 41 ~~~ee~~~~~~~~~D~iAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~~~l~~~~~~i~~~r~--------- 111 (152)
T 3kwo_A 41 EYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKVAKDCFTPLEVIELIKQDYEYLLAEFKK--------- 111 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCCSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------
Confidence 334567889999999999999999873 22 1111 111112111111233333334443333
Q ss_pred HHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 267 LTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 267 ~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.....||..|+++|.-|+.++-.|+
T Consensus 112 ~i~~a~~~~D~~T~dll~~~l~~~Ek~~ 139 (152)
T 3kwo_A 112 LNEAAEKESDTTTAAFAQENIAKYEKSL 139 (152)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4566678899999999999999998885
No 81
>3chh_A P-aminobenzoate N-oxygenase; DI-iron oxygenase, oxidoreductase; 2.00A {Streptomyces thioluteus} PDB: 3chi_A 3cht_A* 3chu_A 2jcd_A
Probab=77.68 E-value=48 Score=32.45 Aligned_cols=169 Identities=16% Similarity=0.040 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHHhhh--cCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHH----HhCCC----CCCCccchhhHHH
Q 016349 168 AHVELNAIDLAWDTVVR--FSPFTDILEDGFFADFAHVADDESRHFAWCSQRLA----ELGFK----YGDMPAHDVLWNQ 237 (391)
Q Consensus 168 AHIElnAIDLAwD~v~R--F~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~----eLG~~----YGDlPaH~gLWe~ 237 (391)
.++|-.=|+.+...++. |+. ..+..+-.+-++...||++|..|-.+-.+ ..|.. |..+.+-..+...
T Consensus 98 I~~E~~lv~~~~r~i~~~~~p~---~~~~~~~ya~ltei~DE~~Hs~Mf~~~~~~~~~~~G~~~~~~~p~~~l~r~l~~~ 174 (336)
T 3chh_A 98 IATEQLIAEPAFDLVMHGVFPG---SDDPLIRKSVQQAIVDESFHTYMHMLAIDRTRELRKISERPPQPELVTYRRLRRV 174 (336)
T ss_dssp HHHHHHTHHHHHHHHHTTCSTT---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCC---CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHH
Confidence 34666666665554443 543 23777877878888999999999999999 58885 3333311113333
Q ss_pred HHhhh---hcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCCh-hHH-HHHHHHHHhHhhhHhhhhHHHHHHHHHcCCCc
Q 016349 238 CKKSS---DNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDH-RTS-NIVARIADEEVAHVAVGVHWFLSVCQKMKRAP 312 (391)
Q Consensus 238 a~~T~---~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~-~sa-~IL~iI~~DEI~HVa~G~rWF~~lC~~~g~dp 312 (391)
..... +..+..+++ -++.|-- +| .+...+..-.+. ..+ .|+++=..||-.|++++..=++.+-++.+..-
T Consensus 175 la~~~~~~~~~l~~~a~-~lvaEei-id---~~~r~~~~D~~vQP~vR~v~riHv~DEaRH~~fare~~~~~~~~l~~~~ 249 (336)
T 3chh_A 175 LADMPEQWERDIAVLVW-GAVAETC-IN---ALLALLARDATIQPMHSLITTLHLRDETAHGSIVVEVVRELYARMNEQQ 249 (336)
T ss_dssp HTTCCCHHHHHHHHHHH-HHHHHHS-BC---HHHHHHHTCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HccCchhhhhHHHHHHH-HHHHHHH-HH---HHHHHhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 33321 122333332 2344532 22 233333322222 223 34555588999999999988888777654222
Q ss_pred hHHHHHHHHhc-CC--CCCCCCCHHHHHhcCCCcc
Q 016349 313 CSTFKDLLKEY-DV--ELKGPFNYSARDEAGIPRD 344 (391)
Q Consensus 313 ~~tf~~lv~~~-~~--~lk~PFN~eAR~~AGfs~~ 344 (391)
...+..++..+ .. ...--+|...=..+|+++.
T Consensus 250 R~~~~~~l~~~l~af~~~~~~~~~~vy~~aGl~~~ 284 (336)
T 3chh_A 250 RRALVRCLPIALEAFAEQDLSALLLELNAAGIRGA 284 (336)
T ss_dssp HHHHHHHHHHHHHHHHCCCTHHHHHHHHHHTCTTH
T ss_pred HHHHHHHHHHHHHHHHHhHhhcCHHHHHHCCCCcH
Confidence 23344444332 11 1122388888889999874
No 82
>1o9r_A Agrobacterium tumefaciens DPS; iron-binding protein, DNA protection from oxidative damage, DNA-binding, iron- binding protein; 1.45A {Agrobacterium tumefaciens} SCOP: a.25.1.1 PDB: 3ge4_A*
Probab=77.00 E-value=9.6 Score=32.78 Aligned_cols=85 Identities=13% Similarity=0.145 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHhCCC-CCC------------CccchhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCH
Q 016349 199 DFAHVADDESRHFAWCSQRLAELGFK-YGD------------MPAHDVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGP 265 (391)
Q Consensus 199 Dwl~VA~DEarHF~Ll~~RL~eLG~~-YGD------------lPaH~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP 265 (391)
=+-+.+.+|..|+-.+.+|+..||.. .|. .|. |-++.-+-...++..--.++-.+-|
T Consensus 54 ~~ee~~~e~~~~aD~lAERI~~LGg~P~~~~~~~~~~s~i~e~~~--~~~~~~eml~~~l~~~~~~i~~~r~-------- 123 (162)
T 1o9r_A 54 LLDTFRTQLDNHGDTIAERVVQLGGTALGSLQAVSSTTKLKAYPT--DIYKIHDHLDALIERYGEVANMIRK-------- 123 (162)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCS--SCCBHHHHHHHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhHCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHH--------
Confidence 34457778899999999999999865 221 111 1111111111223333333333333
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 266 RLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 266 ~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.....||..|+++|.-|+.++-.|+
T Consensus 124 -~i~~a~~~~D~~T~dll~~il~~~Ek~~ 151 (162)
T 1o9r_A 124 -AIDDSDEAGDPTTADIFTAASRDLDKSL 151 (162)
T ss_dssp -HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHhhCCCHHHHHHHHHHHHHHHHHH
Confidence 4566678999999999999999999986
No 83
>2yjk_A AFP, DPS; metal-binding protein, iron uptake, ferritin fold; 2.00A {Microbacterium arborescens} PDB: 2yjj_A
Probab=75.57 E-value=9.8 Score=32.82 Aligned_cols=83 Identities=13% Similarity=0.054 Sum_probs=53.3
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CCCC-----------ccchhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YGDM-----------PAHDVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRL 267 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YGDl-----------PaH~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~ 267 (391)
+-+.+.+|..|+-.+.+|+..||.. .|.+ |. |-.+.-+-...++..--.++-.+-| .
T Consensus 58 ~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~si~e~~~--~~~~~~eml~~~l~~~~~~i~~~r~---------~ 126 (161)
T 2yjk_A 58 LDSVVAHAQDYADTAAERIVALGLPIDSRVSTMAEKTSTAVPA--GFAQWQDEIKAIVSDIDAALVDLQA---------A 126 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCCCCSCS--SCEEHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhccccCCC--CCCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 3456778889999999999999875 2321 21 1111111112233334444444434 3
Q ss_pred HHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 268 TQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 268 i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
+ .....||..|+++|.-|+.++-.|+
T Consensus 127 i-~a~~~~D~~T~dll~~il~~~Ek~~ 152 (161)
T 2yjk_A 127 I-DGLDEVDLTSQDVAIEIKRGVDKDR 152 (161)
T ss_dssp H-HHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred H-HhcccCCHHHHHHHHHHHHHHHHHH
Confidence 4 5567899999999999999999886
No 84
>2cf7_A DPR; peroxide resistance, DPS-family, ferritin-like, ferroxidase, iron-binding; HET: EPE; 1.50A {Streptococcus suis} PDB: 2ux1_A* 2bw1_A* 1umn_A* 2v15_A* 2xjm_A* 2xjn_A* 2xjo_A* 2xkq_A*
Probab=75.32 E-value=10 Score=33.03 Aligned_cols=83 Identities=18% Similarity=0.094 Sum_probs=53.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CCC------------Cccch--hhHHHHHhhhhcHHHHHhhchhhHhhcCCCCC
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YGD------------MPAHD--VLWNQCKKSSDNVAARLAVIPLVQEARGLDAG 264 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YGD------------lPaH~--gLWe~a~~T~~dllaRlAvVp~vlEARGLDvt 264 (391)
+-+.+.+|..|+-.+.+|+..||.. .|. .|... ..=+|.. .++..--.++-.+-|
T Consensus 55 ~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~~eml~---~~l~~~~~~i~~~r~------- 124 (165)
T 2cf7_A 55 MDEYMEEIDGYLAEMSERLITLGGAPFSTLKEFSENSQLKEVLGDYNVTIEEQLA---RVVEVFRYLAALFQK------- 124 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCHHHHHH---HHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHH---HHHHHHHHHHHHHHH-------
Confidence 3456778889999999999999865 221 11100 1112222 233333344443333
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 265 PRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 265 P~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.....||..|+++|.-|+.+|-.|+
T Consensus 125 --~i~~a~~~~D~~T~dll~~il~~~Ek~~ 152 (165)
T 2cf7_A 125 --GFDVSDEEGDSVTNDIFNVAKASIEKHI 152 (165)
T ss_dssp --HHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHhhCCCHHHHHHHHHHHHHHHHHH
Confidence 4556677899999999999999999986
No 85
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=75.06 E-value=7.1 Score=32.37 Aligned_cols=52 Identities=27% Similarity=0.250 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhC
Q 016349 164 LHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELG 222 (391)
Q Consensus 164 LHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG 222 (391)
+=+|. =|+-|||+.-..+--..+ .+-..=+..++.||-+|+.|+.+.|..+-
T Consensus 24 i~sl~-~EleAI~~Y~q~a~~~~d------~~~k~vl~~i~~EEkeH~g~~lelLrr~D 75 (95)
T 3k6c_A 24 IISLR-EELEAVDLYNQRVNACKD------KELKAILAHNRDEEKEHAAMLLEWIRRCD 75 (95)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHH-HHHHHHHHHHHHHHhCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33554 499999997655544443 23334456799999999999999998764
No 86
>4eve_A Neutrophil-activating protein; dodecamer, four-helix bundle, metal transport; 2.10A {Helicobacter pylori} PDB: 4evd_A 3t9j_A 3ta8_A 4evb_A 4evc_A 1ji4_A
Probab=74.64 E-value=12 Score=32.67 Aligned_cols=85 Identities=12% Similarity=0.085 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhhHHHHHHHHHHhCCC-CC------------CCccchhhHHHHHhhhh-cHHHHHhhchhhHhhcCCCC
Q 016349 198 ADFAHVADDESRHFAWCSQRLAELGFK-YG------------DMPAHDVLWNQCKKSSD-NVAARLAVIPLVQEARGLDA 263 (391)
Q Consensus 198 ~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YG------------DlPaH~gLWe~a~~T~~-dllaRlAvVp~vlEARGLDv 263 (391)
.=+-+.+.+|..|+-.+.+|+..||.. .| +.|. +-++. .++-. ++...-.++-.+-|
T Consensus 58 ~~~ee~~~e~~~~~D~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~--~~~~~-~eml~~ll~~~~~~i~~~r~------ 128 (164)
T 4eve_A 58 KATEEIYEEFADMFDDLAERIVQLGHHPLVTLSEAIKLTRVKEETK--TSFHS-KDIFKEILEDYKHLEKEFKE------ 128 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCC--CCCCH-HHHHHHHHHHHHHHHHHHHH------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHcCCCcCCC--CCCCH-HHHHHHHHHHHHHHHHHHHH------
Confidence 334567889999999999999999873 22 2222 11111 22222 23333334443333
Q ss_pred CHHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 264 GPRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 264 tP~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.....||..|+++|.-|+.++-.|+
T Consensus 129 ---~i~~aee~~D~~T~dll~~il~~~Ek~~ 156 (164)
T 4eve_A 129 ---LSNTAEKEGDKVTVTYADDQLAKLQKSI 156 (164)
T ss_dssp ---HHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4566677899999999999999988875
No 87
>2bk6_A Non-heme iron-containing ferritin; DPS (DNA binding protein from starved cells), ferroxidase center, mutagenesis study; 2.19A {Listeria innocua} SCOP: a.25.1.1 PDB: 1qgh_A 2bjy_A 2iy4_A 2bkc_A
Probab=73.05 E-value=15 Score=31.32 Aligned_cols=83 Identities=12% Similarity=0.117 Sum_probs=53.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CC------------CCccch--hhHHHHHhhhhcHHHHHhhchhhHhhcCCCCC
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YG------------DMPAHD--VLWNQCKKSSDNVAARLAVIPLVQEARGLDAG 264 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YG------------DlPaH~--gLWe~a~~T~~dllaRlAvVp~vlEARGLDvt 264 (391)
+-+.+.+|..|+-.+.+|+..||.. .| +.|.-. ..=+|.. .++..--.++-.+-|
T Consensus 46 ~ee~~~e~~~~~D~lAERI~~Lgg~P~~~~~~~~~~s~l~e~~~~~~~~~~eml~---~~l~~~~~~i~~~r~------- 115 (156)
T 2bk6_A 46 MDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLME---DLVGTLELLRDEYKQ------- 115 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSCCCHHHHHH---HHHHHHHHHHHHHHH-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCCHHHHHH---HHHHHHHHHHHHHHH-------
Confidence 3456778889999999999999865 22 112111 1112222 233333344443333
Q ss_pred HHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 265 PRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 265 P~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++.....||..|+++|.-|+.+|-.|+
T Consensus 116 --~i~~a~~~~D~~T~dll~~il~~~Ek~~ 143 (156)
T 2bk6_A 116 --GIELTDKEGDDVTNDMLIAFKASIDKHI 143 (156)
T ss_dssp --HHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHhHCCCHHHHHHHHHHHHHHHHHH
Confidence 3555567799999999999999999886
No 88
>2clb_A DPS-like protein; DI-iron carboxylate, hypothetical protein, bacterioferritin, hydrogen peroxide, metal binding protein, archaea; 2.4A {Sulfolobus solfataricus}
Probab=72.79 E-value=50 Score=29.10 Aligned_cols=127 Identities=22% Similarity=0.257 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccch-hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC-CC---------CCc
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILE-DGFFADFAHVADDESRHFAWCSQRLAELGFK-YG---------DMP 229 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP-~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~-YG---------DlP 229 (391)
+.+|-..-.-|+.++....-..|=..+ .- ..+..=+-..+.||..|+-.+.+|+..||.. .+ .++
T Consensus 27 ~~~LN~~La~e~~~~~~y~~~hw~v~G----~~f~~lh~~f~~~~~ee~~haD~iaERI~~LGg~p~~~~~~~~~~s~I~ 102 (188)
T 2clb_A 27 VDKLVKATAAEFTTYYYYTILRMHLTG----MEGEGLKEIAEDARLEDRLHFELMTQRIYELGGGLPRDIRQLADISACS 102 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCH----HHHGGGHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSSHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHhccCC
Confidence 444544444458887775544442221 11 1223333457888999999999999999976 22 333
Q ss_pred -c-chhhHHHHHhhhhcHHH-HHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHH
Q 016349 230 -A-HDVLWNQCKKSSDNVAA-RLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVC 305 (391)
Q Consensus 230 -a-H~gLWe~a~~T~~dlla-RlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC 305 (391)
. ..+=|..+.+.-..++. --.++-.+-+ +++--... |..|+++|+-|+.|+..|. .||..+.
T Consensus 103 ~e~~~~~~~~~~e~l~~~l~~e~~v~~~~~~---------~i~~A~e~-D~~T~dlL~~~l~e~ee~~----~~l~~~L 167 (188)
T 2clb_A 103 DAYLPENWKDPKEILKVLLEAEQCAIRTWKE---------VCDMTYGK-DPRTYDLAQRILQEEIEHE----AWFLELL 167 (188)
T ss_dssp CCCCCTTTTSHHHHHHHHHHHHHHHHHHHHH---------HHHHHTTT-CHHHHHHHHHHHHHHHHHH----HHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HHHHHHhc-CHHHHHHHHHHHHHHHHHH----HHHHHHh
Confidence 2 12212222222222222 2222232222 34444567 9999999999999999997 4666553
No 89
>4a58_A Ribonucleoside-diphosphate reductase small chain; oxidoreductase, epstein-BARR virus, R2 subunit; 1.68A {Human herpesvirus 4} PDB: 4a5c_A 4a5d_A 4a5e_A 4a5f_A 4a5h_A 4a5i_A 4a5j_A
Probab=72.36 E-value=23 Score=34.34 Aligned_cols=141 Identities=13% Similarity=0.007 Sum_probs=81.6
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHH----HHHhh-hcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCC-CCCC
Q 016349 154 NSGLPLNAYMLHNLAHVELNAIDLA----WDTVV-RFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGF-KYGD 227 (391)
Q Consensus 154 ~~~~~~ra~lLHaiAHIElnAIDLA----wD~v~-RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~-~YGD 227 (391)
..+..+|-+..|.+|=. .+.|-. +..++ .+.. .-=+.||.- .+..|+.|-..+..-+..++. +=+
T Consensus 63 ~Lt~~Er~~~~~vl~~~--~~~D~iv~~nl~~l~~~i~~---pE~~~~l~~---q~~~E~iHs~sYs~il~tl~~~d~~- 133 (324)
T 4a58_A 63 LLNERDLEFYKFLFTFL--AMAEKLVNFNIDELVTSFES---HDIDHYYTE---QKAMENVHGETYANILNMLFDGDRA- 133 (324)
T ss_dssp GSCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHTTCCC---HHHHHHHHH---HHHHHHHHHHHHHHHHHHHTTTCHH-
T ss_pred hCCHHHHHHHHHHHHHH--HHhHHHHHhhHHHHHHHCCc---HHHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCCHH-
Confidence 35555677777776643 333321 11222 3321 012356554 478999999999999999874 111
Q ss_pred CccchhhHHHHHhh----------------hhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHHHHHhH
Q 016349 228 MPAHDVLWNQCKKS----------------SDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDH-RTSNIVARIADEE 290 (391)
Q Consensus 228 lPaH~gLWe~a~~T----------------~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~iI~~DE 290 (391)
--+.++++.... ..++..++... .++|+-=+=.+=.++--|.+.|-. -++++++-|.+||
T Consensus 134 --e~~~~f~~~~~~p~l~~K~~~i~~~~~~~~~~~~~lva~-~~lEgi~FysgF~~~~~l~~~g~m~g~~~~i~~I~RDE 210 (324)
T 4a58_A 134 --AMNAYAEAIMTDEALQAKISWLRDKVAAAVTLPEKILVF-LLIEGIFFISSFYSIALLRVRGLMPGICLANNYISRDE 210 (324)
T ss_dssp --HHHHHHHHHHTCGGGHHHHHCCCCCHHHCSSHHHHHHHH-HHHHHTTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHhCHHHHHHHHHHHHHHhCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHH
Confidence 011233332211 12333344332 355554444333344456666765 4688999999999
Q ss_pred hhhHhhhhHHHHHHHH
Q 016349 291 VAHVAVGVHWFLSVCQ 306 (391)
Q Consensus 291 I~HVa~G~rWF~~lC~ 306 (391)
.-|+.+|..=|+.+.+
T Consensus 211 ~lH~~f~~~l~~~l~~ 226 (324)
T 4a58_A 211 LLHTRAASLLYNSMTA 226 (324)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988887765
No 90
>2wlu_A DPS-like peroxide resistance protein; DNA-binding, oxidoreductase; 1.94A {Streptococcus pyogenes} PDB: 2wla_A
Probab=72.14 E-value=13 Score=32.67 Aligned_cols=86 Identities=16% Similarity=0.134 Sum_probs=54.0
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------Ccc-chhhH-HHHHhhhhcHHHHHhhchhhHhhcCCCCCHHH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YGD---------MPA-HDVLW-NQCKKSSDNVAARLAVIPLVQEARGLDAGPRL 267 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------lPa-H~gLW-e~a~~T~~dllaRlAvVp~vlEARGLDvtP~~ 267 (391)
+-+.+.+|..|+-.+.+|+..||.. .|. ++- ..|.+ +.-+-...++..--.++..+-| .
T Consensus 65 ~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~ 135 (175)
T 2wlu_A 65 MDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQV---------G 135 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 3456778899999999999999865 221 110 11111 1111122233333444443333 3
Q ss_pred HHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 268 TQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 268 i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
++.....||..|+++|.-|+.++-.|+
T Consensus 136 i~~ae~~~D~~T~dll~~il~~~Ek~~ 162 (175)
T 2wlu_A 136 LDITDEEGDAGTNDLFTAAKTEAEKTI 162 (175)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 555667899999999999999999886
No 91
>2c2u_A DPS, DNA-binding stress response protein; DNA-binding protein, iron; 1.1A {Deinococcus radiodurans} PDB: 2c2f_A 2f7n_A
Probab=71.67 E-value=15 Score=33.63 Aligned_cols=86 Identities=13% Similarity=0.009 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------Cccch-hhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YGD---------MPAHD-VLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLT 268 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------lPaH~-gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i 268 (391)
+-+.+.+|..|+-.+.+|+..||.. .|. ++-.. |....-+-...++...-.++-.+-| .+
T Consensus 98 ~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~I~e~~~g~~~~~emL~~ll~~e~~~i~~~re---------~i 168 (207)
T 2c2u_A 98 YDEFIAEIFPSIDEQAERLVALGGSPLAAPADLARYSTVQVPQETVRDARTQVADLVQDLSRVGKGYRD---------DS 168 (207)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTBCCCCSHHHHHHHCSSCCCSSCCCCHHHHHHHHHHHHHHHHHHHHH---------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HH
Confidence 3456778889999999999999865 221 11100 1111111111233333344443333 45
Q ss_pred HHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 269 QKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 269 ~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
+.....||..++++|.-|+.+|-.|+
T Consensus 169 ~~aee~~D~~T~dLl~~il~~~Ekhi 194 (207)
T 2c2u_A 169 QACDEANDPVTADMYNGYAATIDKIR 194 (207)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 66678999999999999999999986
No 92
>3olj_A Ribonucleoside-diphosphate reductase subunit M2; metal-binding, HRRM2, oxidoreductase; 2.10A {Homo sapiens} PDB: 4djn_A
Probab=71.09 E-value=21 Score=33.90 Aligned_cols=141 Identities=16% Similarity=0.058 Sum_probs=79.5
Q ss_pred CCchhhHHHHHHHHHHHHHHHHH--HHHHhhhcCCCcccch--hHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCcc
Q 016349 155 SGLPLNAYMLHNLAHVELNAIDL--AWDTVVRFSPFTDILE--DGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPA 230 (391)
Q Consensus 155 ~~~~~ra~lLHaiAHIElnAIDL--AwD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPa 230 (391)
.+..+|-...|.++=. .+.|- .-+.+-+|...- ..| +.||.- .+..|+.|-..+..-+..+|.+=..
T Consensus 55 L~~~Er~~~~~~l~~~--~~~D~iv~~~l~~~~~~~v-~~pE~~~~~~~---q~~~E~iHs~sYs~il~tl~~d~~e--- 125 (286)
T 3olj_A 55 LKPEERYFISHVLAFF--AASDGIVNENLVERFSQEV-QITEARCFYGF---QIAMENIHSEMYSLLIDTYIKDPKE--- 125 (286)
T ss_dssp SCHHHHHHHHHHHHHH--HHHHHHHHHHHHHTHHHHC-CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHCCCHHH---
T ss_pred CCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHC-CCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCCHHH---
Confidence 4444566666666543 33332 112333453210 123 245444 5789999999999999999864211
Q ss_pred chhhHHHHH-----------------hhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHHHHHhHhh
Q 016349 231 HDVLWNQCK-----------------KSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDH-RTSNIVARIADEEVA 292 (391)
Q Consensus 231 H~gLWe~a~-----------------~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~iI~~DEI~ 292 (391)
-+.++++.. +...++..|+...- ++|+-=+=.+=..+--|.+.|-. -++++++-|.+||.-
T Consensus 126 ~~~~f~~~~~~p~l~~K~~~~~~~~~~~~~~~~~~lva~~-~lEgi~f~~~F~~~~~l~~~g~m~g~~~~i~~I~RDE~~ 204 (286)
T 3olj_A 126 REFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFA-AVEGIFFSGSFASIFWLKKRGLMPGLTFSNELISRDEGL 204 (286)
T ss_dssp HHHHHTHHHHCGGGHHHHHHHHHHHHCSSSCHHHHHHHHH-HHHHTTTHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHhCChhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCchhHHHHHHHHHHHHHH
Confidence 112222111 11123455544443 67864331111123346667764 568999999999999
Q ss_pred hHhhhhHHHHHHH
Q 016349 293 HVAVGVHWFLSVC 305 (391)
Q Consensus 293 HVa~G~rWF~~lC 305 (391)
|+.+|..=|+.+.
T Consensus 205 H~~~~~~l~~~l~ 217 (286)
T 3olj_A 205 HCDFACLMFKHLV 217 (286)
T ss_dssp HHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHh
Confidence 9999977666554
No 93
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=68.91 E-value=13 Score=31.70 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhC
Q 016349 171 ELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELG 222 (391)
Q Consensus 171 ElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG 222 (391)
|++||.+.- -+....+. .+...-.+.++.||.+|+.+....+. -|
T Consensus 44 E~~AI~~Y~-qLA~~AP~-----ee~k~iI~eIr~DE~rH~~~F~~lY~-TG 88 (115)
T 2hz8_A 44 EKQAVKVYK-EAAEKARN-----PEKRQVIDKILEDEEKHIEWLKAASK-QG 88 (115)
T ss_dssp HHHHHHHHH-HHHHSCCC-----TTTTTTHHHHHHHHHHHHHHHHHHHH-SS
T ss_pred HHHHHHHHH-HHHhcCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHH-hC
Confidence 999998843 23344431 23455678899999999999999988 55
No 94
>2xgw_A Peroxide resistance protein; metal binding protein; 2.10A {Streptococcus pyogenes}
Probab=68.43 E-value=16 Score=33.04 Aligned_cols=86 Identities=16% Similarity=0.134 Sum_probs=54.3
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------Ccc-chhhH-HHHHhhhhcHHHHHhhchhhHhhcCCCCCHHH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YGD---------MPA-HDVLW-NQCKKSSDNVAARLAVIPLVQEARGLDAGPRL 267 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------lPa-H~gLW-e~a~~T~~dllaRlAvVp~vlEARGLDvtP~~ 267 (391)
+-+.+.+|..|+-.+.+|+..||.. .|. ++- ..|.+ +.-+-...++..--.++-.+-| .
T Consensus 81 ~ee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~~emL~~ll~~e~~~i~~~re---------~ 151 (199)
T 2xgw_A 81 MDELLDSLNANLDEVSERLITIGGAPYSTLAEFSKHSKLDEAKGTYDKTVAQHLARLVEVYLYLSSLYQV---------G 151 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCSCCCCCCCTTSCHHHHHHHHHHHHHHHHHHHHH---------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCcCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------H
Confidence 3457778899999999999999865 221 110 11111 1111122233334444443333 3
Q ss_pred HHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 268 TQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 268 i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
++.....||..|+++|.-|+.+|-.|+
T Consensus 152 i~~aee~~D~~T~dll~~il~~~Ekh~ 178 (199)
T 2xgw_A 152 LDITDEEGDAGTNDLFTAAKTEAEKTI 178 (199)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 555667899999999999999999986
No 95
>2pyb_A NAPA, neutrophil activating protein; ferritin, DPS, four-helix bundle, metal transport; 2.60A {Borrelia burgdorferi}
Probab=67.45 E-value=5.8 Score=33.80 Aligned_cols=85 Identities=14% Similarity=0.112 Sum_probs=52.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHhCCC-CC---C------Ccc-chhhH-HHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHH
Q 016349 201 AHVADDESRHFAWCSQRLAELGFK-YG---D------MPA-HDVLW-NQCKKSSDNVAARLAVIPLVQEARGLDAGPRLT 268 (391)
Q Consensus 201 l~VA~DEarHF~Ll~~RL~eLG~~-YG---D------lPa-H~gLW-e~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i 268 (391)
-+.+.+|..|+-.+.+|+..||.. .| + ++- ..|-+ ..-+-...++..--.++..+-| .+
T Consensus 44 ee~~~e~~~~aD~lAERI~~Lgg~P~~~~~~~~~~s~l~e~~~~~~~~~~eml~~~l~~~~~~i~~~r~---------~i 114 (151)
T 2pyb_A 44 QKLYEYIEKIIDIVAERSRMLGYDSEFRYSEFMKKSFIKELDIESTSNFLPSMESIVCSLTEILKNIFG---------MR 114 (151)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHTCCCCCCSTTTTTTCSSCCCCSCSSSCCCSSCCTTSTTHHHHHHHHHH---------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH---------HH
Confidence 346778889999999999999875 22 2 111 11111 1111111222223333333322 35
Q ss_pred HHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 269 QKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 269 ~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
+.....||..|+++|.-|+.++-.|+
T Consensus 115 ~~a~~~~D~~T~dll~~il~~~Ek~~ 140 (151)
T 2pyb_A 115 KLIDTAGDYGTANIMDDIMSDLEKHL 140 (151)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhCCCHHHHHHHHHHHHHHHHHH
Confidence 55567899999999999999998886
No 96
>2oc5_A Hypothetical protein; DUF3066 family protein, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.68A {Prochlorococcus marinus} SCOP: a.25.1.6
Probab=64.48 E-value=77 Score=29.77 Aligned_cols=103 Identities=19% Similarity=0.262 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCc--------cchhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHH
Q 016349 195 GFFADFAHVADDESRHFAWCSQRLAELGFKYGDMP--------AHDVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPR 266 (391)
Q Consensus 195 ~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlP--------aH~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~ 266 (391)
+.-+++.+.+.=|.||.+=....=+.||+. -|+| +|+.+-.++.+ ..+..=|-|-.+..|+=-+-
T Consensus 62 ~~~dEL~rLakME~rH~kgF~aCGrNL~V~-pDm~fA~~fF~~LH~nFq~A~~~--gkv~TCLlIQaLiIE~FAIa---- 134 (244)
T 2oc5_A 62 DHVEELKRLAKMEMRHKKGFTACGKNLGVE-ADMDFAREFFAPLRDNFQTALGQ--GKTPTCLLIQALLIEAFAIS---- 134 (244)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHTTCC-CCHHHHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHTHHHHHHHH----
T ss_pred ccHHHHHHHHHHHHHHHhHHHHhccCCcCC-CCcHHHHHHHHHHHHHHHHHHhc--CCeeehHHHHHHHHHHHHHH----
Confidence 457889999999999999888888888886 3554 56655544432 56677777777777763221
Q ss_pred HHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHH
Q 016349 267 LTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSV 304 (391)
Q Consensus 267 ~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~l 304 (391)
--.-...+-|.-+.+|-+-+..||-.|.-+|-.|++.-
T Consensus 135 AYniYIpVAD~FARkITegVVkDEY~HLNfGe~WLk~~ 172 (244)
T 2oc5_A 135 AYHTYIPVSDPFARKITEGVVKDEYTHLNYGEAWLKAN 172 (244)
T ss_dssp HHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhccccccHHHHHHHHhHHhhHHhhcchHHHHHHHH
Confidence 12234468899999999999999999999999999763
No 97
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=63.50 E-value=18 Score=29.97 Aligned_cols=53 Identities=26% Similarity=0.229 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHh
Q 016349 162 YMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAEL 221 (391)
Q Consensus 162 ~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eL 221 (391)
..+=+|. =|+-|||+.-..+-.-.+ .+-..=+..+|.||..|+.|+.+-|..+
T Consensus 22 rai~aL~-~EleAI~~Y~q~A~~t~D------~evk~vl~~iadEEkeH~g~~l~~Lrr~ 74 (95)
T 1zpy_A 22 RAIISLR-EELEAVDLYNQRVNACKD------KELKAILAHNRDEEKEHAAMLLEWIRRC 74 (95)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH-HHHHHHHHHHHHHHhCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344664 699999997655544433 1223335568999999999999999886
No 98
>2c2j_A DNA-binding stress response protein; DNA-binding protein, DPS; 2.05A {Deinococcus radiodurans} PDB: 2c6r_A
Probab=61.16 E-value=28 Score=31.95 Aligned_cols=82 Identities=11% Similarity=-0.014 Sum_probs=52.2
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------C---ccc-hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YGD---------M---PAH-DVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGP 265 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------l---PaH-~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP 265 (391)
+-+.+.+|..|+-.+.+|+..||.. .|. + |.- ...=+|.. .++...-.++-.+-|
T Consensus 85 fee~~~e~~~haD~lAERIl~LGG~P~~t~~~~~~~s~i~e~~~g~~~~~emL~---~ll~~e~~~i~~~re-------- 153 (211)
T 2c2j_A 85 LQDHYEGISKFADDVAERQLSVGASSDGRAITIVAASRLPEIPGGFLDDAQVIQ---FFTYQYETVGQRIHQ-------- 153 (211)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHTCCSCCCCCSCEEHHHHHH---HHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHhCCCcccCCCCCCHHHHHH---HHHHHHHHHHHHHHH--------
Confidence 4456778889999999999999865 221 1 110 11112222 233333344443333
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 266 RLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 266 ~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++..... |..++++|+-|+.+|-.|+
T Consensus 154 -~i~~aee~-D~~T~dLl~~il~~~Ekhi 180 (211)
T 2c2j_A 154 -RVGDVEKV-DPTTANLLQEVEHIIEKYQ 180 (211)
T ss_dssp -HHHHHTTT-CHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHhcc-CHHHHHHHHHHHHHHHHHH
Confidence 34555667 9999999999999999986
No 99
>3hl1_A Ferritin like protein; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Caulobacter vibrioides}
Probab=59.06 E-value=43 Score=32.94 Aligned_cols=66 Identities=14% Similarity=0.042 Sum_probs=53.6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC
Q 016349 155 SGLPLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK 224 (391)
Q Consensus 155 ~~~~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~ 224 (391)
.+...-..+|+.-+-+|+..|=..+=+.|--.+. ..+=+.=...|+.||-.|+.|..+.|..+|..
T Consensus 6 ~~~~~L~~~Lq~Ai~lE~stIp~YL~a~ySi~~~----n~~~~~~i~~V~~eEMlHl~l~aNll~AiGg~ 71 (317)
T 3hl1_A 6 WTLPRLYQHFQGAIDLELWTIPYYLTVLYSIKDP----TTVPYRLIQAAVYQEMLHAQLVSNIANAYGYS 71 (317)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHBSCT----TSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc----CHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 3444556678888899999999888777766652 34666778889999999999999999999987
No 100
>3u52_C Phenol hydroxylase component PHL; 4-helix bundle, dioxygen, hydrocarbons, oxidore; HET: MPO EPE; 1.95A {Pseudomonas stutzeri} PDB: 2inn_C* 2inp_C
Probab=58.19 E-value=46 Score=32.60 Aligned_cols=152 Identities=13% Similarity=0.043 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCC-CCccchhhHHHH----
Q 016349 164 LHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYG-DMPAHDVLWNQC---- 238 (391)
Q Consensus 164 LHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YG-DlPaH~gLWe~a---- 238 (391)
+=.+.|.|+-|-= +.--+.|+... ...-.=-+=.+.||-||...+......++..=| +.-.|.-.|...
T Consensus 123 ~~plr~~E~ga~~-~~a~~~r~~~~-----~~i~na~~fqa~DelRhaQ~ls~~~l~l~~~~g~~~~~~k~~W~~dp~Wq 196 (333)
T 3u52_C 123 LVPLRHVELGANM-NNAKIAGDATA-----TTVSQMHIYTGMDRLGIGQYLSRIALMIDGSTGAALDESKAYWMDDEMWQ 196 (333)
T ss_dssp TTTHHHHHHHHHH-HHHHHHHHCCS-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHCTTTH
T ss_pred cchHhHHHHHHHH-HHHHHHhhcCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhHHHHHHHhCcchH
Confidence 3457799987742 22356677642 122222234678999999988875666643311 123455555422
Q ss_pred --Hh------hhhcHHHHHhhchhhHhhc--CCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHc
Q 016349 239 --KK------SSDNVAARLAVIPLVQEAR--GLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKM 308 (391)
Q Consensus 239 --~~------T~~dllaRlAvVp~vlEAR--GLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~ 308 (391)
.+ +..|..+-+..+.+|+|.- +|=..+ +.+.+...||...+-+.....+||-.|.+.|.-=|+.++++
T Consensus 197 ~~R~~~Ed~~~~~Dw~E~~vA~nlv~E~ll~~L~~~~-~~~~aa~~gd~~~~~~~s~q~d~~~Rh~~~~~alvk~ll~~- 274 (333)
T 3u52_C 197 PMRKLVEDTLVVDDWFELTLVQNILIDGMMYPLVYDK-MDQWFESQGAEDVSMLTEFMRDWYKESLRWTNAMMKAVAGE- 274 (333)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHTHHHHHHHHHHHTH-HHHHHHTTTCGGGGGTSHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHH-HHHHHHHcCCceehhhHHHhhhHHHHHHHHHHHHHHHHHhc-
Confidence 11 2246666777788888853 222222 56677888887766455555666999999999999999987
Q ss_pred CCCchHHHHHHHHhc
Q 016349 309 KRAPCSTFKDLLKEY 323 (391)
Q Consensus 309 g~dp~~tf~~lv~~~ 323 (391)
+-+-....+.++.+|
T Consensus 275 ~~~N~~~lq~Wi~~W 289 (333)
T 3u52_C 275 SETNRELLQKWIDHW 289 (333)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 211133455555555
No 101
>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*
Probab=57.97 E-value=64 Score=27.82 Aligned_cols=80 Identities=15% Similarity=0.150 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CC------------CCccc-hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YG------------DMPAH-DVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGP 265 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YG------------DlPaH-~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP 265 (391)
+-+.+.+|..|+-.+.+|+..||.. .| +.|.- ...=++.. .++..--.++-.+-|
T Consensus 66 ~ee~~~e~~~~aD~lAERI~~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~---~~l~~~~~~i~~~r~-------- 134 (167)
T 3ak8_A 66 LDGFRTALTDHLDTMAERAVQLGGVALGTTQVINSKTPLKSYPLDIHNVQDHLK---ELADRYAVVANDVRK-------- 134 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCCBHHHHHH---HHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHH---HHHHHHHHHHHHHHH--------
Confidence 3456778889999999999999865 22 22221 01112211 233333333333322
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 266 RLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 266 ~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.+..++|..|+++|.-|+.++-.|+
T Consensus 135 ----~i~~a~D~~T~dll~~il~~~Ek~~ 159 (167)
T 3ak8_A 135 ----AIGEAKDEDTADIFTAASRDLDKFL 159 (167)
T ss_dssp ----HHHHCCSHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 2223339999999999999999886
No 102
>3qhb_A Symerythrin, ORF180; four-helix bundle, carboxylate bridged-DIIRON, ferritin-like superfamily, metal transport; 1.20A {Cyanophora paradoxa} PDB: 3qhc_A 3sid_A
Probab=57.11 E-value=18 Score=32.67 Aligned_cols=121 Identities=17% Similarity=0.129 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHH-HH--HHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCC-----------
Q 016349 161 AYMLHNLAHVELNA-ID--LAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYG----------- 226 (391)
Q Consensus 161 a~lLHaiAHIElnA-ID--LAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YG----------- 226 (391)
...|-+-++-|..+ .+ +.+--++|--++ | +-=.=|-.+|..|..|-..+.+.|..++...+
T Consensus 26 ~eNL~~A~~GE~~E~~~~Y~~fA~~A~~EG~----~-~IA~~F~~~A~~E~~HA~r~~kll~~l~~~~~~~~~~~~~~v~ 100 (179)
T 3qhb_A 26 DANAASSIEVEMYECDCMYPTFAEIARRSGQ----P-EIGAMFDAIAKEEGMHAQLLTKLYSELEVKDSAETLEAKRLVS 100 (179)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHTTC----H-HHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHcCh----H-HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccc
Confidence 45555666667777 33 344445555432 2 22233457899999999999999987765542
Q ss_pred --CCccchhhHHHHHhhhhc----HHHHHhhchhhHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHh
Q 016349 227 --DMPAHDVLWNQCKKSSDN----VAARLAVIPLVQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVA 295 (391)
Q Consensus 227 --DlPaH~gLWe~a~~T~~d----llaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa 295 (391)
+.|+- + ...|... |...++ -=..|. -+.=|.+.+.-+.-|+.+.+..++.|..+|-.|..
T Consensus 101 ~~~~p~~--~---~~~T~eN~~~~L~~A~~--GE~~E~--~~mYp~fA~~A~eEG~~eiA~~F~~ia~~Ek~H~~ 166 (179)
T 3qhb_A 101 TIESQID--A---VASDSRGLRRALETALE--VETIES--QKTYPAFAKLAAEQGNMEVATAFEAIVKSETKHAN 166 (179)
T ss_dssp HHHHTHH--H---HHHSHHHHHHHHHHHHH--HHHHHH--HTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccc--c---cCcHHHHHHHHHHHHHH--hhHHHH--HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 12321 0 1234433 332222 222222 24568999999999999999999999999999974
No 103
>2z90_A Starvation-inducible DNA-binding protein or FINE tangled PILI major subunit; quarternary assembly, ferroxidation; 2.40A {Mycobacterium smegmatis str}
Probab=56.82 E-value=40 Score=28.97 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=52.1
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CC------------CCccc-hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YG------------DMPAH-DVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGP 265 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YG------------DlPaH-~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP 265 (391)
+-+.+.+|..|+-.+.+|+..||.. .| +.|.- ...=+|. ..++..--.++-.+-|
T Consensus 56 ~ee~~~e~~~~aD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml---~~~l~~~~~~i~~~r~-------- 124 (161)
T 2z90_A 56 LDELVDFAREGSDTIAERMRALDAVPDGRSDTVAATTTLPEFPAFERSTADVV---DLITTRINATVDTIRR-------- 124 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHCCSCCCCSSCEEHHHHH---HHHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHhHCCCCCCCCCCCCHHHHH---HHHHHHHHHHHHHHHH--------
Confidence 3356778889999999999999865 22 22220 0111221 1233333444443333
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 266 RLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 266 ~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++..... |..|+++|.-|+.++-.|+
T Consensus 125 -~i~~a~~~-D~~T~dll~~il~~~Ek~~ 151 (161)
T 2z90_A 125 -VHDAVDAE-DPSTADLLHGLIDGLEKQA 151 (161)
T ss_dssp -HHHHHHHH-CHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHhcCC-CHHHHHHHHHHHHHHHHHH
Confidence 35555667 9999999999999998886
No 104
>1rcw_A CT610, CADD; iron, DI-iron, redox enzyme, metallo enzyme, oxidoreductase,; 2.50A {Chlamydia trachomatis} SCOP: a.132.1.4
Probab=54.88 E-value=40 Score=29.67 Aligned_cols=136 Identities=17% Similarity=0.140 Sum_probs=80.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHH----HhhHHHHHHHHHHhCCCCCCC------c
Q 016349 160 NAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDE----SRHFAWCSQRLAELGFKYGDM------P 229 (391)
Q Consensus 160 ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DE----arHF~Ll~~RL~eLG~~YGDl------P 229 (391)
+..+++..-|+.--+-=+|. ++.+.++ | +-..-|++.+.+| ..|+.|+.+-++++|.+.-++ |
T Consensus 41 ~~yl~qdy~yl~~f~~~~a~-~~~~~~~-----~-~~~~~~~~~i~~e~~~~~~h~~l~~~~~~~~Gi~~~~~~~~~~~p 113 (231)
T 1rcw_A 41 QAYAKDYYLHIKAFPKYLSA-IHSRCDD-----L-EARKLLLDNLMDEENGYPNHIDLWKQFVFALGVTPEELEAHEPSE 113 (231)
T ss_dssp HHHHHHTHHHHHHHHHHHHH-HHTTCCC-----H-HHHHHHHHHHHHHHSSSSCHHHHHHHHHHHTTCCHHHHHHCCCCH
T ss_pred HHHHHHhHHHHHHHHHHHHH-HHhcCCC-----H-HHHHHHHHHHHHhcCCCCChHHHHHHHHHHcCCCHHHHhcCCCCH
Confidence 56677666666533333344 4455543 1 3355678888888 699999999999999975332 3
Q ss_pred cc----hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHH---hCCChhHHHHH-HHHHHhHhhhHhhhhHHH
Q 016349 230 AH----DVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLI---GFGDHRTSNIV-ARIADEEVAHVAVGVHWF 301 (391)
Q Consensus 230 aH----~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~---~~GD~~sa~IL-~iI~~DEI~HVa~G~rWF 301 (391)
.- +.+++.+. ..++..-+|.+ .+.|.-|.+.....+..+. +..|..+..-+ ..|--| ..||..+...+
T Consensus 114 ~t~~y~~~~~~~~~--~~~~~~~laal-~~~E~~~~~~~~~~~~~~~~~~~wi~~~~~~~f~~h~~~d-~~h~~~~~~~l 189 (231)
T 1rcw_A 114 AAKAKVATFMRWCT--GDSLAAGVAAL-YSYESQIPRIAREKIRGLTEYFGFSNPEDYAYFTEHEEAD-VRHAREEKALI 189 (231)
T ss_dssp HHHHHHHHHHHHHT--SSCHHHHHHHH-HHHHTTHHHHHHHHHHHHHHHSCCCSGGGGHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc--CCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCChhhhHHHHHHHHHh-HHHHHHHHHHH
Confidence 22 45666543 25777777775 5667665333222222222 22333333333 223334 58998888888
Q ss_pred HHHHH
Q 016349 302 LSVCQ 306 (391)
Q Consensus 302 ~~lC~ 306 (391)
..+|.
T Consensus 190 ~~~~~ 194 (231)
T 1rcw_A 190 EMLLK 194 (231)
T ss_dssp HHHCS
T ss_pred HHHHH
Confidence 88875
No 105
>4dr0_A Ribonucleoside-diphosphate reductase subunit beta; ribonucleotide reductase, manganese, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=53.07 E-value=60 Score=31.78 Aligned_cols=140 Identities=15% Similarity=0.084 Sum_probs=80.9
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHH--H---HHHhhhcCCCcccch--hHHHHHHHHHHHHHH-hhHHHHHHHHHHhCCCC
Q 016349 154 NSGLPLNAYMLHNLAHVELNAIDL--A---WDTVVRFSPFTDILE--DGFFADFAHVADDES-RHFAWCSQRLAELGFKY 225 (391)
Q Consensus 154 ~~~~~~ra~lLHaiAHIElnAIDL--A---wD~v~RF~~~~~~lP--~~Fy~Dwl~VA~DEa-rHF~Ll~~RL~eLG~~Y 225 (391)
..+..+|-+..|.++=. .+.|- + +..+++.-. -| ..||.-+ +..|+ .|-..+..-|..+|..
T Consensus 67 ~Lt~~Er~~~~~vl~f~--~~~Dsiv~~~~~~~~~~~v~----~pE~~~~~~~q---~~~E~aiHs~sYs~il~tl~~~- 136 (350)
T 4dr0_A 67 YLGKNEQDTYMKVLAGL--TLLDTEQGNTGMPIVAEHVD----GHQRKAVLNFM---AMMENAVHAKSYSNIFMTLAPT- 136 (350)
T ss_dssp TSCHHHHHHHHHHHHHH--HHHHHHHHHTHHHHHHHHSC----SHHHHHHHHHH---HHHHHHTHHHHHHHHHHHHSCH-
T ss_pred hCCHHHHHHHHHHHHHH--HHHHHHHHHhhHHHHHHhCC----CHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHcCc-
Confidence 35555676677776643 33332 1 112222221 23 3455553 56778 9999999999999732
Q ss_pred CCCccchhhHHHHHhhhhcHHHHHhhch---------------------hhHhhcCCCCCHHHHHHHHhCCCh-hHHHHH
Q 016349 226 GDMPAHDVLWNQCKKSSDNVAARLAVIP---------------------LVQEARGLDAGPRLTQKLIGFGDH-RTSNIV 283 (391)
Q Consensus 226 GDlPaH~gLWe~a~~T~~dllaRlAvVp---------------------~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL 283 (391)
+--+.+++... +...+..|...+- .++|+-=+=.+=.++--|.+.|-. -++.++
T Consensus 137 ---~e~~~~f~~~~-~~p~l~~Ka~~i~~~y~~~~~~~~~~~~~~lva~~~lEGi~FysgF~~~~~l~~~g~m~G~~~~i 212 (350)
T 4dr0_A 137 ---ETINEVFEWVK-QNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSGEII 212 (350)
T ss_dssp ---HHHHHHHHHHH-HCHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHTTTCSHHHHHHH
T ss_pred ---hhHHHHHHHHh-cCHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhHHHHH
Confidence 22234554432 2233344433333 345544433333344456666755 468899
Q ss_pred HHHHHhHhhhHhhhhHHHHHHHHH
Q 016349 284 ARIADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 284 ~iI~~DEI~HVa~G~rWF~~lC~~ 307 (391)
+-|.+||.-|+.+|..=|+.+.++
T Consensus 213 ~~I~RDE~lH~~f~~~l~~~l~~~ 236 (350)
T 4dr0_A 213 NLILRDEAIHGVYVGLLAQEIYNK 236 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999987767666544
No 106
>2yw6_A DNA protection during starvation protein; DNA-binding protein, quarternary assembly, ferroxidation, oxidoreductase; HET: DNA; 2.53A {Mycobacterium smegmatis} SCOP: a.25.1.1 PDB: 1vei_A 1vel_A 1veq_A 1uvh_A* 2yw7_A
Probab=52.89 E-value=93 Score=27.36 Aligned_cols=82 Identities=16% Similarity=0.070 Sum_probs=51.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHhCCC-CCC---------C---ccc-hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCH
Q 016349 200 FAHVADDESRHFAWCSQRLAELGFK-YGD---------M---PAH-DVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGP 265 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eLG~~-YGD---------l---PaH-~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP 265 (391)
+-+.+.+|..|+-.+.+|+..||.. .|. + |.- ...=+|.. .++...-.++-.+-|
T Consensus 54 ~ee~~~e~~~haD~lAERIl~LGg~P~~t~~~~~~~s~i~e~~~~~~~~~eml~---~~l~~~~~~i~~~r~-------- 122 (183)
T 2yw6_A 54 IDPQVELVRGYADEVAERIATLGKSPKGTPGAIIKDRTWDDYSVERDTVQAHLA---ALDLVYNGVIEDTRK-------- 122 (183)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSHHHHHHHCCSCCCCCCSEEHHHHHH---HHHHHHHHHHHHHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHCCCCccCCCCCCHHHHHH---HHHHHHHHHHHHHHH--------
Confidence 3456778889999999999999865 221 1 211 11112221 233333344443333
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 266 RLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 266 ~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
.++..... |..|+++|.-|+.+|-.|+
T Consensus 123 -~i~~ae~~-D~~T~dll~~il~~~Ek~~ 149 (183)
T 2yw6_A 123 -SIEKLEDL-DLVSQDLLIAHAGELEKFQ 149 (183)
T ss_dssp -HHHHHTTT-CHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHhcc-CHHHHHHHHHHHHHHHHHH
Confidence 35555667 9999999999999999996
No 107
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=44.88 E-value=76 Score=26.71 Aligned_cols=54 Identities=17% Similarity=0.068 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHh
Q 016349 162 YMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAEL 221 (391)
Q Consensus 162 ~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eL 221 (391)
..|-..-..|..||+..-.++-++.+. -=+.. +.++|.||..|..+|.+.|.+.
T Consensus 103 ~~l~~ai~~E~~a~~~Y~~~a~~~~d~---~~k~l---~~~la~eE~~H~~~l~~~~~~~ 156 (157)
T 1vjx_A 103 EVLDIAISVEKDSIILYYELKDGLVNS---DAQKT---VKKIIDQEKEHLRKLLEMKRES 156 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSH---HHHHH---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCH---HHHHH---HHHHHHHHHHHHHHHHHHHhhc
Confidence 344444478999999988887777641 12233 3458899999999999998764
No 108
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=41.16 E-value=1.6e+02 Score=24.84 Aligned_cols=122 Identities=12% Similarity=0.012 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhhHHHHHh
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVLWNQCKK 240 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gLWe~a~~ 240 (391)
+-.|-.|.-++..+++-.=.++-.-. ..++..=|.+.+.+..+|-.-|..++.++|.. .+-..+++-.+.+
T Consensus 13 i~~Ln~Li~~~~D~~~gY~~aae~~~------d~~lk~~f~~~a~~~~~~~~eL~~~i~~lGg~---p~~~~s~~g~~hr 83 (153)
T 4etr_A 13 LDVLNDLLQTSKDGEAGFHACAEDLR------DPQLKAAMLEQSRDCAAAADELERIVLELGGK---PKDSTSFAGDLHR 83 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC---C------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCCCcHHHHHHH
Confidence 44555555566555554333222222 23566667788999999999999999999954 4444445444443
Q ss_pred hhhcHHHH------Hhhchh--hHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhH
Q 016349 241 SSDNVAAR------LAVIPL--VQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHV 294 (391)
Q Consensus 241 T~~dllaR------lAvVp~--vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HV 294 (391)
+--++-+- -+++.- .-|...++ .+-+-++..-+..+..+|+.++.++-.|.
T Consensus 84 ~~~~lks~~~~~~~~~iL~~~~~gE~~~~~---~Y~~al~~~lp~~~r~ll~~q~~~~~~~~ 142 (153)
T 4etr_A 84 RWVDLKSLVTGKDEEAVLNECERGEDVAKH---RYQAALEKSLPAEIHQVIERQYQGVLRHH 142 (153)
T ss_dssp -------------CHHHHHHHHHHHHHHHH---HHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHH---HHHHHHhccCCHHHHHHHHHHHHHHHHHH
Confidence 32222211 222222 22333333 23334443445667788888888877764
No 109
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=37.53 E-value=1.1e+02 Score=25.83 Aligned_cols=67 Identities=10% Similarity=-0.095 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhhHH
Q 016349 160 NAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVLWN 236 (391)
Q Consensus 160 ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gLWe 236 (391)
-...|-.....|..||+..-.++-...+ .+=..=+-++|.||..|..++.+.|..+--. .+.+-||.
T Consensus 106 ~~~~L~~ai~~E~~a~~~Y~~~a~~~~d------~~~r~l~~~ia~eE~~H~~~l~~~l~~l~~~----~~~~~~~~ 172 (175)
T 2fzf_A 106 IIDLIRWAMKAEEIAAEFYLKLEEMVKE------EEKKRLMRYLADMERGHYYTLRAEYELLLNW----EMYSQMMH 172 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCS------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----SCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHhc
Confidence 3556666678899999997766655442 1112224568899999999999988876321 45555554
No 110
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=36.08 E-value=52 Score=32.46 Aligned_cols=86 Identities=20% Similarity=0.175 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccchhh---HHHHHhhhhcH-HHHHhhchhhHhhcCCCCCHHHHHHH
Q 016349 196 FFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHDVL---WNQCKKSSDNV-AARLAVIPLVQEARGLDAGPRLTQKL 271 (391)
Q Consensus 196 Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~gL---We~a~~T~~dl-laRlAvVp~vlEARGLDvtP~~i~kl 271 (391)
...=|-++..++.+|..+|.+||..||-+--.-+.-.|- |++....+++. +=|-|+ ..|..|+- ....|
T Consensus 241 ~~~~~~~i~~~~~~h~~~l~~~~~~~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~l~~al---~~~~~gi~----~~~~l 313 (365)
T 3fse_A 241 AKALFQEMITNKQRHIEYLETYLTRLGEKPSLSANIANQYAKVKTALTGSDDIYQIRSAL---GDIQTGIG----DIGNL 313 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSCC---------------CHHHHHHHHH---HHHHHHHH----HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCcCcchhHHHHHHHHHhcCCChHHHHHHHh---cchhhhHH----HHHHH
Confidence 333445688899999999999999988763222212111 23223222332 223232 33555543 33333
Q ss_pred H-hCCChhHHHHHHHHHH
Q 016349 272 I-GFGDHRTSNIVARIAD 288 (391)
Q Consensus 272 ~-~~GD~~sa~IL~iI~~ 288 (391)
. +.=|..+.+||+.|+.
T Consensus 314 ~~~~~dp~~~~i~~~i~~ 331 (365)
T 3fse_A 314 CAMYTDPIATAIFKEIYK 331 (365)
T ss_dssp TTTCSCHHHHHHHHHHHH
T ss_pred HHhcCCHHHHHHHHHHHH
Confidence 3 4567788888888877
No 111
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=35.01 E-value=1.2e+02 Score=29.55 Aligned_cols=66 Identities=15% Similarity=0.049 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHh-CCCCCC-Cccch
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAEL-GFKYGD-MPAHD 232 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eL-G~~YGD-lPaH~ 232 (391)
.+.|++-..-|.-||-..- -+|+..+. ..-.+=......+|.-|+..+.+-|+++ |.+.|. +|+-+
T Consensus 145 ~aDL~~NiaAE~~Ar~~Y~-rL~~~tdD-----p~vkd~L~fLi~RE~~H~~~f~~ALe~l~~~~~~~~~pvp~ 212 (302)
T 2v8t_A 145 ILDLLHNFFLEVAARTHKL-RVYEMTDN-----PVAREMIGYLLVRGGVHAAAYGKALESLTGVEMTKMLPIPK 212 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHTTCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCGGGGCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcccCCCC
Confidence 5667766667999987754 45677642 2333334556789999999999999999 888886 77655
No 112
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=34.17 E-value=70 Score=30.61 Aligned_cols=65 Identities=15% Similarity=0.040 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCCCccch
Q 016349 161 AYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGDMPAHD 232 (391)
Q Consensus 161 a~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGDlPaH~ 232 (391)
++.|++-..-|.-||-..- -+|+..+. ..-.+=......+|.-|+..+.+-|+++|.+.| +|+-+
T Consensus 138 ~aDL~~niaaE~~Ar~~Y~-rl~~~tdD-----p~vkd~L~fLi~RE~~H~~~f~~aLe~l~~~~~-~pvp~ 202 (266)
T 1o9i_A 138 VADMRFNVVRESEARLQVS-RLYSMTED-----EGVRDMLKFLLARETQHQLQFMKAQEELEEKYG-IIVPG 202 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHTTCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-SSSST
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCC
Confidence 5677766667999987754 45677642 233333445678999999999999999988777 77765
No 113
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=30.75 E-value=1.7e+02 Score=24.70 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhC
Q 016349 162 YMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELG 222 (391)
Q Consensus 162 ~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG 222 (391)
..|-.--.+|..|++..-.+.-+..+. --+.. +.+.|.||..|..+|.+.+..+.
T Consensus 96 ~~l~~A~~~E~~a~~fY~~~a~~~~d~---~~k~~---~~~la~eE~~H~~~l~~~~~~~~ 150 (167)
T 2oh3_A 96 HALRYARDNEIRGMEYYKEAAANSADP---EVKRL---GADFAAEEAEHVVALDKWIEKTP 150 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHH---HHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHH---HHHHHHHHHHHHHHHHHHHHHcc
Confidence 344444578999999877776666531 11223 34588899999999999998874
No 114
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=30.14 E-value=11 Score=37.33 Aligned_cols=56 Identities=21% Similarity=0.124 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC
Q 016349 163 MLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK 224 (391)
Q Consensus 163 lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~ 224 (391)
.|-.--..|+.||+.....+-.-.+ .+-..=+.++|.||.+|+.++.+.|..++-.
T Consensus 23 air~ai~~E~eAi~~Y~q~A~~~~d------~~~K~vl~~ia~EEk~H~~~f~~ll~~l~~~ 78 (345)
T 2e0z_A 23 ILRLAIIAELDAINLYEQMARYSED------ENVRKILLDVAREEKAHVGEFMALLLNLDPE 78 (345)
T ss_dssp --------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 3333346899999986544332222 1122224458999999999999999887543
No 115
>1za0_A Possible acyl-[acyl-carrier protein] desaturase D (acyl-[ACP] desaturase) (stearoyl-ACP...; four-helix bundle, metal binding protein; 2.00A {Mycobacterium tuberculosis} SCOP: a.25.1.2
Probab=28.15 E-value=34 Score=32.91 Aligned_cols=22 Identities=23% Similarity=0.369 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhHHHHHHHHHHh
Q 016349 200 FAHVADDESRHFAWCSQRLAEL 221 (391)
Q Consensus 200 wl~VA~DEarHF~Ll~~RL~eL 221 (391)
.-++|.||.||+..+.+.++++
T Consensus 182 ~~~IA~DE~RH~~~y~~~v~~~ 203 (275)
T 1za0_A 182 IDRIARDEVRHEEFFANLVTHC 203 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4479999999999999888874
No 116
>3ez0_A Uncharacterized protein with ferritin-like fold; YP_832262.1, protein of unknown function with ferritin-like structural genomics; HET: UNL TLA; 2.33A {Arthrobacter SP}
Probab=27.52 E-value=47 Score=31.29 Aligned_cols=57 Identities=35% Similarity=0.486 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCC
Q 016349 161 AYMLHNLAHVELNAID-LAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFK 224 (391)
Q Consensus 161 a~lLHaiAHIElnAID-LAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~ 224 (391)
.-+|=-+|--|+.|.+ ||-|+ ++.+. |.. .....+.|.-|..||..|.++|.++|.+
T Consensus 17 ~~llg~lAygel~AF~RLa~da--~~AP~---L~~--r~ala~mAaae~~hf~~L~~~l~~~G~D 74 (225)
T 3ez0_A 17 ADLFGMMAYGELSAFERFSADA--RYSPT---LHD--RAVLGRIAVVEFRHYELVSARLEAMGID 74 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--TTCSS---STT--HHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hhCCC---HHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4456667788888888 47777 56642 322 3567899999999999999999999987
No 117
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=24.86 E-value=15 Score=36.25 Aligned_cols=50 Identities=22% Similarity=0.209 Sum_probs=0.0
Q ss_pred hHhhcCCCCCHHHHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHH
Q 016349 255 VQEARGLDAGPRLTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 255 vlEARGLDvtP~~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~ 307 (391)
--|-.+.+ .+.+......|.+..++|..|-+||+.|+..=.+|+++++.+
T Consensus 29 ~~E~eAi~---~Y~q~A~~~~d~~~K~vl~~ia~EEk~H~~~f~~ll~~l~~~ 78 (345)
T 2e0z_A 29 IAELDAIN---LYEQMARYSEDENVRKILLDVAREEKAHVGEFMALLLNLDPE 78 (345)
T ss_dssp -----------------------------------------------------
T ss_pred HHHHHHHH---HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 34555554 467777778899999999999999999999999999998665
No 118
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=24.35 E-value=76 Score=27.01 Aligned_cols=47 Identities=13% Similarity=0.358 Sum_probs=34.3
Q ss_pred HHHHHHhCCChhHHHHHHHHHHhHhhhHhhhhHHHHHHHHHcCCCchHHHHHHH
Q 016349 267 LTQKLIGFGDHRTSNIVARIADEEVAHVAVGVHWFLSVCQKMKRAPCSTFKDLL 320 (391)
Q Consensus 267 ~i~kl~~~GD~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~~g~dp~~tf~~lv 320 (391)
+-+-...+-|.+-.+++.-|.+||+.|+ .||..+-. .| +..+|.+-+
T Consensus 51 Y~qLA~~AP~ee~k~iI~eIr~DE~rH~----~~F~~lY~-TG--~p~sY~eGL 97 (115)
T 2hz8_A 51 YKEAAEKARNPEKRQVIDKILEDEEKHI----EWLKAASK-QG--NAEQFASLV 97 (115)
T ss_dssp HHHHHHSCCCTTTTTTHHHHHHHHHHHH----HHHHHHHH-SS--CCTTHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHH----HHHHHHHH-hC--ChHhHHHHH
Confidence 4444445667777789999999999998 58999888 67 445565543
No 119
>3q4o_A Uncharacterized protein MJ0754; ferritin-like protein, four-helix bundle, metal binding, DIN center, unknown function; HET: B3P; 1.34A {Methanocaldococcus jannaschii} PDB: 3q4q_A* 3q4r_A* 3q4n_A
Probab=23.82 E-value=4.2e+02 Score=24.25 Aligned_cols=154 Identities=12% Similarity=0.083 Sum_probs=84.7
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCC
Q 016349 147 KEIPAPKNSGLPLNAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYG 226 (391)
Q Consensus 147 ~~vPrrk~~~~~~ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YG 226 (391)
..+|. ...+......++.++ .=|.-|=|+....+=+|+ + .=|..++.-|++|...+...|...|...-
T Consensus 17 ~~~p~-~~Ls~~E~~~Ll~m~-EEEklArdvY~~l~e~~g-----~-----~~F~NIa~SEq~H~dal~~Ll~rYgl~~P 84 (196)
T 3q4o_A 17 RGSHM-QPISEEEKEGLIEMR-EEEKLARDVYLTLYNKWK-----L-----QIFKNIAESEQTHMDAVKYLLEKYNIPDP 84 (196)
T ss_dssp -------CCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHC-----C-----HHHHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred CCCCC-CCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhC-----C-----chHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 33444 234444555555544 779999999887777886 2 23667899999999999999999998642
Q ss_pred -------CCccc--hhhHHHHHh-hhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhCCCh-hHHHHHHHHHHhHhhhHh
Q 016349 227 -------DMPAH--DVLWNQCKK-SSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGFGDH-RTSNIVARIADEEVAHVA 295 (391)
Q Consensus 227 -------DlPaH--~gLWe~a~~-T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~GD~-~sa~IL~iI~~DEI~HVa 295 (391)
.|-.- ..|++.... -..++.+=+-+--. .|- .+-...+++...-|. ....+.+...+==-.|-+
T Consensus 85 ~~~~~~G~f~~p~lq~LY~~L~e~G~~S~~dAl~vGa~-iEe----~dI~dl~~~l~~t~~~Di~~Vy~nL~~gS~nHLr 159 (196)
T 3q4o_A 85 VKNDSIGVFSNPKFEELYKKLVEKGDKSEVDALKVGAT-IED----LDIADLEKWINKTDNEDIKFVYENLMKGSRNHMR 159 (196)
T ss_dssp CSCCSTTCCSSHHHHHHHHHHHHHHTTCHHHHHHHHHH-HHH----HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeeccHhHHHHHHHHHHHhhhhHHHHHHHHHH-HHH----hhHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 11111 112222211 11233333222221 121 122344555554443 444555665554448888
Q ss_pred hhhHHHHHHHHHcCCC------chHHHHHHHH
Q 016349 296 VGVHWFLSVCQKMKRA------PCSTFKDLLK 321 (391)
Q Consensus 296 ~G~rWF~~lC~~~g~d------p~~tf~~lv~ 321 (391)
.-.|++.. .|.. +.+.|.++|.
T Consensus 160 AF~r~L~~----~G~~Y~pq~ls~~e~~~i~~ 187 (196)
T 3q4o_A 160 AFVRMLNN----YGSNYTPQYISKEEYEEIIS 187 (196)
T ss_dssp HHHHHHHH----TTCCCCCSSSCHHHHHHHHT
T ss_pred HHHHHHHH----CCCCCCCccCCHHHHHHHHC
Confidence 87777763 4553 3566777764
No 120
>3dde_A TENA/THI-4 protein, domain of unknown function WI oxygenase-like fold; structural genomics, joint center for structural genomics; HET: MSE PGE; 2.30A {Shewanella denitrificans OS217}
Probab=22.62 E-value=4e+02 Score=23.57 Aligned_cols=140 Identities=16% Similarity=0.121 Sum_probs=75.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhcCCCcccchhHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCCC------Cccc--
Q 016349 160 NAYMLHNLAHVELNAIDLAWDTVVRFSPFTDILEDGFFADFAHVADDESRHFAWCSQRLAELGFKYGD------MPAH-- 231 (391)
Q Consensus 160 ra~lLHaiAHIElnAIDLAwD~v~RF~~~~~~lP~~Fy~Dwl~VA~DEarHF~Ll~~RL~eLG~~YGD------lPaH-- 231 (391)
+..+.-..-++.-.+-=++. ++.+-++ .+..-..-|.+.+.+|..|-.++.+.|+.+|...-+ .|+-
T Consensus 42 ~~yl~Qdy~yl~~~~r~la~-a~~ka~~----~~~~~~~~~~~~~~~e~~~e~~~~~~l~~~G~~~~~~~~~~~~pat~a 116 (239)
T 3dde_A 42 AIYMTETYHYTKHNAKNQAL-VGIMGKD----LPGKYLSFCFHHAHEEAGHELMALSDIASIGFDREDVLSSKPLPATET 116 (239)
T ss_dssp HHHHHHHHHHHTTHHHHHHH-HHHHCSS----CCHHHHHHHHHHHHHHTTTHHHHHHHHHHTTCCHHHHHTCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhCCC----chHHHHHHHHHHHHHHHChHHHHHHHHHHhCCCHHHHHhCCCChHHHH
Confidence 34444444444333322333 4556654 232245557778889999997766669999998654 2322
Q ss_pred --hhhHHHHHhhhhcHHHHHhhchhhHhhcCCCCCHHHHHHHHhC-CC-hhHHHHHHHHHHhHhhhHhhhhHHHHHHHHH
Q 016349 232 --DVLWNQCKKSSDNVAARLAVIPLVQEARGLDAGPRLTQKLIGF-GD-HRTSNIVARIADEEVAHVAVGVHWFLSVCQK 307 (391)
Q Consensus 232 --~gLWe~a~~T~~dllaRlAvVp~vlEARGLDvtP~~i~kl~~~-GD-~~sa~IL~iI~~DEI~HVa~G~rWF~~lC~~ 307 (391)
+.|.+.+.. .++..-+|.+- ++|.-+ +....+++.+++. |= .....-+..=-...+.|++ .|+.+-++
T Consensus 117 Y~~~l~~~a~~--~~~~~~la~~~-~~E~~y-~~~~~~~~~l~~~~~l~~~~~~f~~~h~~~d~~h~~----~~~~~ld~ 188 (239)
T 3dde_A 117 LIAYLYWISAT--GNPVQRLGYSY-WAENVY-GYIDPVLKAIQSTLDLTPQSMKFFIAHSKIDAKHAE----EVNEMLHE 188 (239)
T ss_dssp HHHHHHHHHHS--SCGGGGHHHHH-HHHTCH-HHHHHHHHHHHHHTTCCGGGGHHHHHHHHHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHhC--CCHHHHHHHHH-HHHHhh-HHHHHHHHHHHHHhCcCHHHHHHHHHHHhcchhHHH----HHHHHHHH
Confidence 334444332 46776677654 788877 6666666666643 21 1222222211112247874 35555555
Q ss_pred cCCCc
Q 016349 308 MKRAP 312 (391)
Q Consensus 308 ~g~dp 312 (391)
...+|
T Consensus 189 ~~~~~ 193 (239)
T 3dde_A 189 VCKTQ 193 (239)
T ss_dssp HCCSH
T ss_pred HcCCH
Confidence 44444
No 121
>2ouf_A Hypothetical protein; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Helicobacter pylori} SCOP: a.292.1.1 PDB: 2bo3_A 3mli_A
Probab=21.24 E-value=73 Score=26.22 Aligned_cols=24 Identities=25% Similarity=0.331 Sum_probs=20.8
Q ss_pred HhhhhcHHHHHhhchhhHhhcCCC
Q 016349 239 KKSSDNVAARLAVIPLVQEARGLD 262 (391)
Q Consensus 239 ~~T~~dllaRlAvVp~vlEARGLD 262 (391)
.+--..++.|+|++-+.+|.+|+|
T Consensus 31 ~~ELe~llerlaamE~llEe~G~~ 54 (94)
T 2ouf_A 31 KKELERLLELLALLETFIEKEDLE 54 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCc
Confidence 344567899999999999999999
No 122
>1jm0_A Protein (four-helix bundle model); alpha-helical bundle, protein design, de novo protein; 1.70A {Synthetic} SCOP: k.8.1.1 PDB: 1jmb_A 1ovu_A 1ovv_A 1lt1_A 1ec5_A 1nvo_A 1ovr_A 2kik_A 1u7j_A 1y47_A 1mft_A 1u7m_A
Probab=21.04 E-value=39 Score=24.33 Aligned_cols=18 Identities=22% Similarity=0.440 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHhHhhhHh
Q 016349 278 RTSNIVARIADEEVAHVA 295 (391)
Q Consensus 278 ~sa~IL~iI~~DEI~HVa 295 (391)
.|.++|+.|+.||-.|+-
T Consensus 25 vsr~lle~iL~dEEeH~d 42 (50)
T 1jm0_A 25 VKLPVLAKILEDEEKHIE 42 (50)
T ss_dssp HCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 788999999999999984
No 123
>2uw1_A Desaturase, plastid delta4 multifunctional acyl-ACYL carrier desaturase; electron transfer, oxidoreductase, lipid synthesis, fatty AC biosynthesis; HET: GVM; 1.95A {Hedera helix} PDB: 2uw1_B* 1oq4_A 1oq7_A 1oq9_A 1oqb_A 2xz0_A* 2xz1_A* 1afr_A 2j2f_A
Probab=20.39 E-value=57 Score=32.31 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=17.1
Q ss_pred HHHHHHHHhhHHHHHHHHH
Q 016349 201 AHVADDESRHFAWCSQRLA 219 (391)
Q Consensus 201 l~VA~DEarHF~Ll~~RL~ 219 (391)
-++|.||.||+..+.+.++
T Consensus 198 ~~IA~DE~RH~~~Y~~~v~ 216 (338)
T 2uw1_A 198 GSIASDEKRHATAYTKIVE 216 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999887
Done!