Query 016350
Match_columns 391
No_of_seqs 369 out of 1419
Neff 11.2
Searched_HMMs 46136
Date Fri Mar 29 06:03:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016350.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016350hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.4E-35 3.1E-40 256.8 25.4 291 47-375 9-300 (394)
2 TIGR01299 synapt_SV2 synaptic 100.0 4.6E-35 9.9E-40 277.8 31.0 206 47-255 163-381 (742)
3 PRK14995 methyl viologen resis 100.0 5.6E-34 1.2E-38 265.6 26.5 320 49-372 4-346 (495)
4 COG2271 UhpC Sugar phosphate p 100.0 3.6E-35 7.8E-40 250.7 14.8 328 46-389 24-358 (448)
5 KOG0569 Permease of the major 100.0 8.8E-32 1.9E-36 240.3 34.6 322 50-371 10-355 (485)
6 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.6E-33 7.7E-38 254.3 25.9 311 47-364 4-323 (412)
7 PRK10642 proline/glycine betai 100.0 1.4E-32 3E-37 256.1 29.1 291 50-363 15-328 (490)
8 PRK10077 xylE D-xylose transpo 100.0 5.2E-32 1.1E-36 252.7 32.6 319 47-372 8-357 (479)
9 TIGR00887 2A0109 phosphate:H+ 100.0 1.7E-32 3.7E-37 256.4 28.3 323 46-371 11-385 (502)
10 PRK03545 putative arabinose tr 100.0 2.5E-32 5.5E-37 247.8 26.0 280 49-368 7-287 (390)
11 TIGR00879 SP MFS transporter, 100.0 3E-31 6.6E-36 247.8 32.3 322 47-369 24-367 (481)
12 KOG0254 Predicted transporter 100.0 1.8E-31 3.8E-36 249.6 30.5 327 47-374 41-382 (513)
13 PRK10406 alpha-ketoglutarate t 100.0 8.6E-32 1.9E-36 247.2 27.9 282 49-364 20-322 (432)
14 PRK12307 putative sialic acid 100.0 2.7E-31 5.8E-36 244.2 27.3 299 47-370 14-315 (426)
15 TIGR00711 efflux_EmrB drug res 100.0 8.3E-32 1.8E-36 251.9 23.5 312 52-369 3-339 (485)
16 TIGR00891 2A0112 putative sial 100.0 6.5E-31 1.4E-35 240.2 28.4 306 47-363 8-316 (405)
17 PRK09556 uhpT sugar phosphate 100.0 1.4E-32 3E-37 254.8 16.6 303 47-363 25-336 (467)
18 PRK11551 putative 3-hydroxyphe 100.0 9.3E-31 2E-35 239.1 27.8 292 46-371 10-305 (406)
19 TIGR00898 2A0119 cation transp 100.0 4.6E-31 1E-35 247.8 25.1 293 72-374 110-408 (505)
20 PRK10213 nepI ribonucleoside t 100.0 2.2E-30 4.7E-35 234.7 27.6 271 49-360 18-290 (394)
21 PRK11663 regulatory protein Uh 100.0 2.9E-31 6.3E-36 243.7 22.0 283 49-348 21-306 (434)
22 PRK09705 cynX putative cyanate 100.0 2E-30 4.3E-35 235.1 26.4 280 50-370 9-289 (393)
23 PRK10091 MFS transport protein 100.0 9.2E-31 2E-35 236.7 23.8 281 52-371 4-285 (382)
24 PRK09952 shikimate transporter 100.0 8E-30 1.7E-34 234.2 28.4 292 46-368 17-333 (438)
25 TIGR00710 efflux_Bcr_CflA drug 100.0 4.7E-30 1E-34 232.9 26.2 286 52-371 6-292 (385)
26 PRK15034 nitrate/nitrite trans 100.0 6.9E-30 1.5E-34 229.5 26.5 278 49-368 32-333 (462)
27 TIGR00903 2A0129 major facilit 100.0 3.8E-30 8.2E-35 229.7 24.3 249 63-350 3-252 (368)
28 PRK15402 multidrug efflux syst 100.0 8.9E-30 1.9E-34 232.4 26.7 293 47-372 9-302 (406)
29 PRK15075 citrate-proton sympor 100.0 2.1E-29 4.5E-34 231.6 28.9 280 50-362 14-315 (434)
30 PRK03699 putative transporter; 100.0 1.4E-29 3.1E-34 229.9 27.3 285 49-370 5-290 (394)
31 TIGR00894 2A0114euk Na(+)-depe 100.0 5.1E-30 1.1E-34 238.0 24.3 288 46-351 14-327 (465)
32 PRK15403 multidrug efflux syst 100.0 1.7E-29 3.6E-34 230.1 26.5 267 54-353 19-286 (413)
33 PRK10504 putative transporter; 100.0 9.5E-30 2.1E-34 236.8 25.2 314 52-372 11-348 (471)
34 PLN00028 nitrate transmembrane 100.0 1.4E-29 3.1E-34 234.6 26.0 275 50-351 35-318 (476)
35 TIGR00893 2A0114 d-galactonate 100.0 5.7E-30 1.2E-34 233.2 21.9 279 60-352 3-282 (399)
36 PRK10133 L-fucose transporter; 100.0 2.7E-29 5.8E-34 229.9 26.3 291 49-371 24-345 (438)
37 TIGR00890 2A0111 Oxalate/Forma 100.0 6.6E-30 1.4E-34 231.2 21.5 285 53-372 6-291 (377)
38 PF07690 MFS_1: Major Facilita 100.0 1.8E-30 4E-35 232.7 17.7 289 57-372 2-294 (352)
39 KOG1330 Sugar transporter/spin 100.0 4E-31 8.8E-36 228.2 12.0 281 44-348 26-310 (493)
40 TIGR00900 2A0121 H+ Antiporter 100.0 2.7E-29 5.8E-34 226.3 24.3 287 56-372 4-298 (365)
41 TIGR00886 2A0108 nitrite extru 100.0 8E-30 1.7E-34 229.8 20.7 294 54-371 4-311 (366)
42 TIGR00895 2A0115 benzoate tran 100.0 4.3E-29 9.4E-34 227.6 24.0 311 47-364 13-327 (398)
43 PRK03893 putative sialic acid 100.0 1.2E-28 2.5E-33 231.2 25.6 319 47-368 16-358 (496)
44 PRK10473 multidrug efflux syst 100.0 8.8E-29 1.9E-33 224.9 24.0 286 53-373 5-291 (392)
45 PRK11273 glpT sn-glycerol-3-ph 100.0 6.6E-29 1.4E-33 229.3 22.2 287 49-352 27-322 (452)
46 PRK03633 putative MFS family t 100.0 4.1E-28 8.8E-33 219.5 26.2 277 50-368 5-282 (381)
47 PRK11043 putative transporter; 100.0 6.4E-28 1.4E-32 219.9 25.3 273 56-366 11-283 (401)
48 COG2223 NarK Nitrate/nitrite t 100.0 1.8E-28 3.8E-33 210.3 19.4 290 47-372 10-305 (417)
49 TIGR00881 2A0104 phosphoglycer 100.0 3.2E-29 7E-34 226.9 15.8 276 59-349 3-280 (379)
50 PRK11652 emrD multidrug resist 100.0 1E-27 2.3E-32 218.0 25.1 267 49-351 6-273 (394)
51 KOG2533 Permease of the major 100.0 2.2E-28 4.7E-33 221.7 19.8 301 47-363 41-355 (495)
52 PRK11102 bicyclomycin/multidru 100.0 6.2E-28 1.3E-32 218.4 22.7 268 65-364 5-273 (377)
53 PRK11195 lysophospholipid tran 100.0 8.9E-28 1.9E-32 217.5 23.5 272 55-358 7-278 (393)
54 PRK05122 major facilitator sup 100.0 1.3E-27 2.9E-32 217.7 24.5 278 50-372 14-300 (399)
55 KOG2532 Permease of the major 100.0 5.3E-28 1.1E-32 218.9 21.3 281 78-376 65-358 (466)
56 TIGR00885 fucP L-fucose:H+ sym 100.0 2.2E-27 4.7E-32 215.5 24.5 283 53-373 5-321 (410)
57 TIGR00712 glpT glycerol-3-phos 100.0 1.2E-27 2.7E-32 220.1 21.5 286 50-351 26-317 (438)
58 KOG0255 Synaptic vesicle trans 100.0 3.5E-27 7.5E-32 222.0 25.0 288 79-376 111-405 (521)
59 TIGR00899 2A0120 sugar efflux 100.0 4.1E-27 8.9E-32 212.9 24.5 276 58-370 4-284 (375)
60 TIGR00805 oat sodium-independe 100.0 2.1E-28 4.6E-33 232.0 16.5 305 54-367 36-415 (633)
61 TIGR00897 2A0118 polyol permea 100.0 1.1E-26 2.5E-31 211.4 26.9 280 53-364 15-301 (402)
62 KOG0253 Synaptic vesicle trans 100.0 4.7E-27 1E-31 196.4 22.0 324 46-375 73-435 (528)
63 TIGR00896 CynX cyanate transpo 100.0 7.3E-27 1.6E-31 209.4 23.6 268 66-372 15-284 (355)
64 PRK12382 putative transporter; 100.0 1.4E-26 3E-31 210.5 25.6 275 53-372 17-300 (392)
65 TIGR00883 2A0106 metabolite-pr 100.0 1.2E-26 2.6E-31 211.2 24.7 272 61-363 3-297 (394)
66 TIGR00892 2A0113 monocarboxyla 100.0 9.2E-27 2E-31 214.7 23.5 286 49-348 17-303 (455)
67 PRK09874 drug efflux system pr 100.0 7.1E-26 1.5E-30 207.1 28.7 287 52-372 15-309 (408)
68 PF00083 Sugar_tr: Sugar (and 100.0 1.7E-32 3.6E-37 254.0 -15.7 313 57-369 6-334 (451)
69 PRK10489 enterobactin exporter 99.9 5.2E-27 1.1E-31 214.9 16.7 280 59-371 25-309 (417)
70 cd06174 MFS The Major Facilita 99.9 6.4E-26 1.4E-30 203.1 22.4 261 55-373 3-264 (352)
71 PF06609 TRI12: Fungal trichot 99.9 1.5E-24 3.2E-29 199.1 29.2 325 57-389 50-417 (599)
72 PRK10054 putative transporter; 99.9 1.9E-25 4E-30 202.5 20.3 279 55-371 11-294 (395)
73 KOG3764 Vesicular amine transp 99.9 3.3E-27 7.2E-32 199.7 8.0 257 85-375 103-362 (464)
74 TIGR00902 2A0127 phenyl propri 99.9 5E-25 1.1E-29 199.2 22.6 281 56-374 9-293 (382)
75 PRK11646 multidrug resistance 99.9 1E-24 2.2E-29 198.0 23.9 279 56-373 15-296 (400)
76 PRK11010 ampG muropeptide tran 99.9 1.9E-24 4E-29 200.8 26.0 281 53-367 14-305 (491)
77 PRK11128 putative 3-phenylprop 99.9 1.3E-24 2.8E-29 196.6 22.1 275 60-372 13-291 (382)
78 PRK08633 2-acyl-glycerophospho 99.9 9.5E-25 2.1E-29 224.4 21.8 279 70-372 29-320 (1146)
79 PRK15011 sugar efflux transpor 99.9 1.6E-23 3.4E-28 190.2 26.8 275 55-368 19-299 (393)
80 TIGR00901 2A0125 AmpG-related 99.9 3.8E-24 8.2E-29 192.0 22.4 270 68-371 5-295 (356)
81 COG0738 FucP Fucose permease [ 99.9 1.8E-23 3.9E-28 178.4 24.4 289 51-373 13-324 (422)
82 KOG0252 Inorganic phosphate tr 99.9 2.2E-25 4.8E-30 192.1 11.7 321 46-373 36-400 (538)
83 TIGR00806 rfc RFC reduced fola 99.9 1E-23 2.3E-28 186.1 21.6 165 66-234 41-208 (511)
84 PRK11902 ampG muropeptide tran 99.9 3.4E-23 7.3E-28 188.7 25.5 277 58-368 6-293 (402)
85 PRK06814 acylglycerophosphoeth 99.9 7.2E-24 1.6E-28 217.2 23.5 287 55-369 19-309 (1140)
86 TIGR00882 2A0105 oligosacchari 99.9 2.6E-23 5.7E-28 189.2 23.9 286 54-370 5-303 (396)
87 PRK10207 dipeptide/tripeptide 99.9 6.3E-23 1.4E-27 189.7 22.7 308 51-368 14-363 (489)
88 PRK09528 lacY galactoside perm 99.9 9.8E-23 2.1E-27 186.8 23.0 288 56-373 15-314 (420)
89 KOG2615 Permease of the major 99.9 3.5E-23 7.5E-28 174.5 15.0 140 90-232 70-217 (451)
90 KOG2504 Monocarboxylate transp 99.9 5.5E-23 1.2E-27 188.6 17.0 320 47-374 42-388 (509)
91 PTZ00207 hypothetical protein; 99.9 5.7E-21 1.2E-25 176.8 26.2 150 69-225 45-201 (591)
92 TIGR00889 2A0110 nucleoside tr 99.9 2.3E-21 5E-26 176.8 22.7 277 56-371 7-301 (418)
93 COG2807 CynX Cyanate permease 99.9 1.5E-20 3.3E-25 158.3 25.3 285 53-376 14-299 (395)
94 TIGR00924 yjdL_sub1_fam amino 99.9 4.7E-21 1E-25 177.2 23.7 172 53-227 12-190 (475)
95 PF05977 MFS_3: Transmembrane 99.9 1.3E-20 2.8E-25 173.9 21.7 293 52-375 11-308 (524)
96 TIGR00792 gph sugar (Glycoside 99.9 2.7E-21 5.8E-26 178.5 14.9 267 73-372 22-308 (437)
97 TIGR02718 sider_RhtX_FptX side 99.8 4.2E-19 9.1E-24 161.3 24.1 276 53-364 3-287 (390)
98 PRK09584 tppB putative tripept 99.8 7.4E-19 1.6E-23 163.6 23.5 166 53-221 23-193 (500)
99 KOG2563 Permease of the major 99.8 3.6E-18 7.8E-23 148.0 21.6 288 44-364 38-345 (480)
100 TIGR01301 GPH_sucrose GPH fami 99.8 1.6E-17 3.5E-22 150.9 22.3 294 55-372 8-357 (477)
101 PRK15462 dipeptide/tripeptide 99.8 1.4E-16 3E-21 145.4 26.6 169 53-224 11-184 (493)
102 KOG4686 Predicted sugar transp 99.8 1E-18 2.2E-23 141.7 10.7 309 46-387 39-365 (459)
103 PF13347 MFS_2: MFS/sugar tran 99.8 6.1E-18 1.3E-22 155.4 16.4 269 72-373 23-312 (428)
104 PRK10642 proline/glycine betai 99.8 6.8E-18 1.5E-22 157.6 16.8 182 69-252 268-458 (490)
105 PRK09669 putative symporter Ya 99.8 3.1E-17 6.7E-22 151.5 16.8 262 72-369 31-312 (444)
106 TIGR00788 fbt folate/biopterin 99.8 6.6E-17 1.4E-21 149.3 18.7 298 53-368 28-335 (468)
107 PRK10429 melibiose:sodium symp 99.7 8.9E-17 1.9E-21 149.3 16.0 283 56-369 11-314 (473)
108 PF03825 Nuc_H_symport: Nucleo 99.7 1.8E-15 3.9E-20 136.0 23.1 283 58-373 9-295 (400)
109 TIGR01299 synapt_SV2 synaptic 99.7 1.1E-15 2.4E-20 146.2 20.4 138 92-231 599-736 (742)
110 PRK09848 glucuronide transport 99.7 1.1E-15 2.4E-20 141.4 19.0 279 58-371 15-314 (448)
111 KOG2325 Predicted transporter/ 99.7 3.6E-15 7.9E-20 133.2 19.5 187 46-233 29-234 (488)
112 TIGR01272 gluP glucose/galacto 99.7 1.2E-15 2.6E-20 133.3 16.3 205 136-371 5-228 (310)
113 TIGR00880 2_A_01_02 Multidrug 99.7 3E-16 6.5E-21 120.8 10.6 136 94-230 4-140 (141)
114 PF01306 LacY_symp: LacY proto 99.7 1.8E-15 4E-20 133.5 15.7 291 53-374 9-312 (412)
115 PF03137 OATP: Organic Anion T 99.7 6E-18 1.3E-22 156.9 -0.0 304 55-364 7-387 (539)
116 PRK11462 putative transporter; 99.7 1.4E-14 3E-19 133.8 21.0 260 73-368 32-310 (460)
117 COG2211 MelB Na+/melibiose sym 99.6 6.6E-15 1.4E-19 131.3 16.6 289 55-373 16-324 (467)
118 PRK15011 sugar efflux transpor 99.6 8.5E-15 1.8E-19 133.1 17.3 155 72-230 237-392 (393)
119 PRK11551 putative 3-hydroxyphe 99.6 5.3E-15 1.2E-19 135.3 15.4 158 71-230 240-397 (406)
120 TIGR00889 2A0110 nucleoside tr 99.6 1.3E-15 2.9E-20 139.1 10.7 160 72-231 229-405 (418)
121 PRK05122 major facilitator sup 99.6 1.1E-14 2.4E-19 132.8 16.7 156 71-231 236-391 (399)
122 TIGR00890 2A0111 Oxalate/Forma 99.6 2.5E-15 5.4E-20 135.9 12.3 147 72-221 226-374 (377)
123 KOG0569 Permease of the major 99.6 6.3E-14 1.4E-18 126.3 21.0 226 2-231 215-457 (485)
124 KOG3626 Organic anion transpor 99.6 2E-15 4.4E-20 140.3 11.4 304 52-364 98-474 (735)
125 PF11700 ATG22: Vacuole efflux 99.6 2.8E-13 6.1E-18 124.2 24.6 251 90-363 72-361 (477)
126 PRK09528 lacY galactoside perm 99.6 3.7E-15 8.1E-20 136.8 11.4 140 90-230 264-405 (420)
127 cd06174 MFS The Major Facilita 99.6 3.1E-14 6.6E-19 127.4 15.6 165 60-227 184-350 (352)
128 PF03209 PUCC: PUCC protein; 99.6 3.9E-13 8.4E-18 116.8 21.4 282 77-388 6-312 (403)
129 PF05631 DUF791: Protein of un 99.6 8.7E-13 1.9E-17 112.8 23.2 268 69-371 52-329 (354)
130 COG3104 PTR2 Dipeptide/tripept 99.6 1.6E-13 3.5E-18 121.5 18.4 174 53-229 23-206 (498)
131 PRK12382 putative transporter; 99.6 5.3E-14 1.1E-18 128.0 15.8 152 70-226 235-386 (392)
132 TIGR00902 2A0127 phenyl propri 99.6 8.3E-14 1.8E-18 126.1 15.7 162 58-224 212-374 (382)
133 TIGR00899 2A0120 sugar efflux 99.6 1.1E-13 2.4E-18 125.2 16.2 150 76-229 225-374 (375)
134 TIGR00887 2A0109 phosphate:H+ 99.6 2.6E-13 5.5E-18 127.4 18.2 162 70-231 307-491 (502)
135 PRK09874 drug efflux system pr 99.6 4.2E-14 9E-19 129.5 12.4 158 69-227 237-396 (408)
136 TIGR00883 2A0106 metabolite-pr 99.5 5.9E-14 1.3E-18 127.7 13.1 159 58-218 226-390 (394)
137 TIGR00892 2A0113 monocarboxyla 99.5 9E-14 2E-18 128.6 14.2 164 58-223 248-415 (455)
138 PRK09556 uhpT sugar phosphate 99.5 1.3E-13 2.8E-18 128.2 15.4 171 53-226 260-446 (467)
139 PRK10077 xylE D-xylose transpo 99.5 4.7E-13 1E-17 125.2 19.0 160 69-231 289-460 (479)
140 TIGR00879 SP MFS transporter, 99.5 1.4E-13 3E-18 128.7 15.2 176 53-231 286-473 (481)
141 PRK09705 cynX putative cyanate 99.5 5.4E-13 1.2E-17 121.3 16.9 162 66-231 220-384 (393)
142 KOG2816 Predicted transporter 99.5 7.3E-13 1.6E-17 120.1 17.6 310 55-387 26-344 (463)
143 PRK03699 putative transporter; 99.5 3E-13 6.6E-18 123.0 14.9 168 59-230 213-381 (394)
144 PRK03633 putative MFS family t 99.5 3.8E-13 8.3E-18 121.8 15.4 150 72-227 221-370 (381)
145 TIGR00893 2A0114 d-galactonate 99.5 1.8E-13 3.8E-18 124.6 13.2 170 53-225 217-395 (399)
146 PRK09952 shikimate transporter 99.5 5.2E-13 1.1E-17 123.0 16.4 158 72-231 271-435 (438)
147 TIGR00891 2A0112 putative sial 99.5 2.7E-13 5.8E-18 124.0 13.0 140 72-213 259-400 (405)
148 TIGR00895 2A0115 benzoate tran 99.5 4.9E-13 1.1E-17 121.9 13.9 134 65-200 264-397 (398)
149 TIGR00897 2A0118 polyol permea 99.5 7.6E-13 1.6E-17 120.7 14.2 157 66-227 237-399 (402)
150 PRK10489 enterobactin exporter 99.5 5.3E-13 1.2E-17 122.4 13.2 158 71-231 243-402 (417)
151 PRK03893 putative sialic acid 99.5 4.5E-13 9.8E-18 125.9 12.9 143 71-216 295-440 (496)
152 COG2270 Permeases of the major 99.5 3.1E-12 6.7E-17 111.0 15.9 269 86-380 56-347 (438)
153 PRK03545 putative arabinose tr 99.5 4E-12 8.7E-17 115.6 17.7 147 75-226 230-377 (390)
154 TIGR00898 2A0119 cation transp 99.5 2E-12 4.4E-17 121.7 15.8 135 94-231 361-497 (505)
155 PRK11128 putative 3-phenylprop 99.4 2.8E-12 6E-17 116.2 15.7 148 71-223 225-373 (382)
156 PRK11273 glpT sn-glycerol-3-ph 99.4 6.8E-12 1.5E-16 116.3 16.8 168 56-226 258-432 (452)
157 PF11700 ATG22: Vacuole efflux 99.4 1.3E-11 2.9E-16 113.2 16.4 179 51-231 281-470 (477)
158 PRK11663 regulatory protein Uh 99.4 1.1E-11 2.4E-16 114.2 15.3 168 56-226 248-421 (434)
159 PRK10504 putative transporter; 99.4 8.6E-12 1.9E-16 116.4 14.8 144 60-205 270-417 (471)
160 TIGR00900 2A0121 H+ Antiporter 99.4 2E-12 4.3E-17 116.4 10.1 131 72-204 232-364 (365)
161 KOG2504 Monocarboxylate transp 99.4 6.5E-12 1.4E-16 116.0 12.7 177 51-229 298-476 (509)
162 PRK15075 citrate-proton sympor 99.4 1.8E-11 3.9E-16 112.8 15.2 138 66-205 253-396 (434)
163 PRK11010 ampG muropeptide tran 99.4 1.2E-10 2.6E-15 108.7 20.4 155 74-231 246-405 (491)
164 TIGR00882 2A0105 oligosacchari 99.4 9.8E-12 2.1E-16 113.3 12.7 133 91-224 257-390 (396)
165 PF01770 Folate_carrier: Reduc 99.3 3.1E-10 6.7E-15 100.1 21.1 294 73-372 26-338 (412)
166 PRK12307 putative sialic acid 99.3 4.1E-11 8.8E-16 110.4 16.4 136 71-209 251-388 (426)
167 PF05977 MFS_3: Transmembrane 99.3 1.6E-11 3.5E-16 114.0 13.2 153 70-225 237-390 (524)
168 TIGR00792 gph sugar (Glycoside 99.3 4.6E-11 9.9E-16 110.5 15.5 115 91-205 260-382 (437)
169 TIGR02718 sider_RhtX_FptX side 99.3 2.1E-11 4.6E-16 110.9 13.0 148 73-223 230-385 (390)
170 PRK10406 alpha-ketoglutarate t 99.3 3.6E-11 7.8E-16 110.8 14.7 156 71-229 263-424 (432)
171 COG2814 AraJ Arabinose efflux 99.3 9.4E-11 2E-15 102.8 14.4 159 64-227 225-384 (394)
172 PF06813 Nodulin-like: Nodulin 99.3 1.9E-10 4.1E-15 95.4 15.3 161 66-231 17-184 (250)
173 PRK10054 putative transporter; 99.3 3.9E-11 8.4E-16 109.1 12.2 129 91-221 247-376 (395)
174 TIGR00896 CynX cyanate transpo 99.3 5.8E-11 1.3E-15 106.6 13.0 136 70-208 216-353 (355)
175 TIGR00712 glpT glycerol-3-phos 99.3 6E-11 1.3E-15 109.6 12.9 159 70-231 270-436 (438)
176 TIGR01272 gluP glucose/galacto 99.3 1.4E-10 3E-15 101.5 14.5 158 51-214 140-300 (310)
177 PLN00028 nitrate transmembrane 99.3 7.5E-11 1.6E-15 109.8 13.6 152 73-229 274-433 (476)
178 TIGR00881 2A0104 phosphoglycer 99.3 1.2E-11 2.6E-16 111.9 7.5 154 55-211 220-379 (379)
179 COG2271 UhpC Sugar phosphate p 99.3 1.5E-10 3.2E-15 100.6 13.6 172 51-225 252-430 (448)
180 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.2E-10 2.6E-15 106.5 13.9 162 56-217 247-409 (412)
181 PRK10213 nepI ribonucleoside t 99.2 3.6E-10 7.7E-15 102.8 16.3 145 74-222 240-384 (394)
182 COG2270 Permeases of the major 99.2 1E-10 2.2E-15 101.7 11.6 155 75-231 276-431 (438)
183 PF03825 Nuc_H_symport: Nucleo 99.2 2.4E-10 5.3E-15 103.0 14.6 176 53-230 209-397 (400)
184 PRK15402 multidrug efflux syst 99.2 4.9E-10 1.1E-14 102.5 16.4 144 74-221 238-387 (406)
185 PRK11646 multidrug resistance 99.2 3E-10 6.4E-15 103.5 14.2 151 72-224 229-383 (400)
186 PRK10091 MFS transport protein 99.2 2.6E-10 5.5E-15 103.4 13.6 148 74-225 223-372 (382)
187 TIGR00894 2A0114euk Na(+)-depe 99.2 6.6E-10 1.4E-14 103.6 16.3 175 52-229 262-450 (465)
188 PF00083 Sugar_tr: Sugar (and 99.2 1.4E-13 3.1E-18 127.6 -9.7 165 68-243 270-445 (451)
189 PRK08633 2-acyl-glycerophospho 99.2 6.2E-10 1.3E-14 115.4 15.7 143 73-218 254-399 (1146)
190 TIGR00901 2A0125 AmpG-related 99.1 7.3E-10 1.6E-14 99.5 13.4 121 65-187 223-355 (356)
191 TIGR00710 efflux_Bcr_CflA drug 99.1 8.7E-10 1.9E-14 100.1 14.0 135 74-213 229-370 (385)
192 PF03092 BT1: BT1 family; Int 99.1 1.7E-09 3.6E-14 99.0 15.4 156 71-230 10-176 (433)
193 PF01306 LacY_symp: LacY proto 99.1 3.2E-10 6.9E-15 100.6 10.2 141 89-230 260-402 (412)
194 TIGR00711 efflux_EmrB drug res 99.1 6.1E-10 1.3E-14 104.5 12.5 131 71-203 275-410 (485)
195 PRK11902 ampG muropeptide tran 99.1 1.9E-09 4.2E-14 98.4 15.2 146 75-227 234-388 (402)
196 TIGR00903 2A0129 major facilit 99.1 3.2E-09 6.9E-14 95.3 15.9 167 55-230 196-366 (368)
197 PRK06814 acylglycerophosphoeth 99.1 8.3E-10 1.8E-14 114.2 13.7 144 72-217 246-410 (1140)
198 PRK09848 glucuronide transport 99.1 2E-09 4.4E-14 99.8 14.9 129 72-202 249-387 (448)
199 PF07690 MFS_1: Major Facilita 99.1 4.5E-10 9.7E-15 100.6 10.3 126 67-194 222-352 (352)
200 KOG4686 Predicted sugar transp 99.1 1.6E-09 3.5E-14 88.9 12.2 169 53-227 269-441 (459)
201 KOG0253 Synaptic vesicle trans 99.1 2.6E-10 5.6E-15 97.0 6.8 125 100-231 393-521 (528)
202 KOG0254 Predicted transporter 99.1 1.3E-08 2.9E-13 95.7 19.1 185 51-246 295-495 (513)
203 COG0477 ProP Permeases of the 99.1 4.2E-09 9.2E-14 92.3 14.8 158 60-220 11-176 (338)
204 PRK11102 bicyclomycin/multidru 99.1 5.7E-09 1.2E-13 94.5 15.3 121 76-199 220-345 (377)
205 PRK14995 methyl viologen resis 99.1 1.8E-09 4E-14 101.2 12.4 129 72-202 280-412 (495)
206 PF13347 MFS_2: MFS/sugar tran 99.1 2.8E-09 6.1E-14 98.2 13.4 148 53-202 227-383 (428)
207 PRK11195 lysophospholipid tran 99.1 6.8E-09 1.5E-13 94.4 15.7 133 76-213 231-364 (393)
208 PRK10473 multidrug efflux syst 99.0 2.1E-09 4.5E-14 97.9 11.9 132 77-216 230-361 (392)
209 TIGR00926 2A1704 Peptide:H+ sy 99.0 9.7E-08 2.1E-12 91.1 22.9 151 73-226 10-179 (654)
210 PRK10429 melibiose:sodium symp 99.0 7.5E-09 1.6E-13 96.5 15.2 136 65-202 245-392 (473)
211 COG2223 NarK Nitrate/nitrite t 99.0 1.3E-09 2.9E-14 94.8 8.7 150 70-226 237-398 (417)
212 TIGR00769 AAA ADP/ATP carrier 99.0 3.7E-07 7.9E-12 83.3 24.6 286 51-363 7-345 (472)
213 PRK10133 L-fucose transporter; 99.0 7.6E-09 1.6E-13 95.3 13.4 135 78-217 287-421 (438)
214 PRK09669 putative symporter Ya 99.0 1.3E-08 2.9E-13 94.1 15.0 114 91-204 267-389 (444)
215 PRK11043 putative transporter; 99.0 1.3E-08 2.9E-13 92.9 14.5 129 73-204 225-358 (401)
216 PRK15034 nitrate/nitrite trans 99.0 9.4E-09 2E-13 93.5 12.8 134 94-227 292-452 (462)
217 KOG0637 Sucrose transporter an 99.0 7.9E-09 1.7E-13 90.7 11.1 147 53-201 34-203 (498)
218 COG2807 CynX Cyanate permease 98.9 1.3E-07 2.8E-12 81.0 16.2 157 68-227 225-383 (395)
219 TIGR00924 yjdL_sub1_fam amino 98.9 7.6E-08 1.6E-12 89.6 16.0 134 91-225 315-464 (475)
220 TIGR00885 fucP L-fucose:H+ sym 98.9 3.9E-08 8.4E-13 89.8 13.5 154 57-213 238-396 (410)
221 KOG2532 Permease of the major 98.9 6E-08 1.3E-12 88.8 13.8 171 51-228 258-446 (466)
222 KOG0252 Inorganic phosphate tr 98.8 3.6E-09 7.8E-14 92.9 5.5 177 51-231 304-500 (538)
223 PRK09584 tppB putative tripept 98.8 1.5E-07 3.3E-12 88.1 16.6 133 91-224 319-474 (500)
224 KOG3764 Vesicular amine transp 98.8 2E-08 4.4E-13 86.6 8.0 170 53-225 272-450 (464)
225 TIGR00788 fbt folate/biopterin 98.8 4.4E-08 9.6E-13 90.9 10.6 125 79-205 281-415 (468)
226 COG2211 MelB Na+/melibiose sym 98.8 2.4E-07 5.1E-12 83.5 14.4 142 57-199 242-392 (467)
227 PF06779 DUF1228: Protein of u 98.7 5.4E-08 1.2E-12 65.4 7.4 80 63-144 4-83 (85)
228 KOG3098 Uncharacterized conser 98.7 4.7E-06 1E-10 75.3 21.8 106 94-200 56-161 (461)
229 KOG3762 Predicted transporter 98.7 2.7E-08 5.8E-13 89.2 7.4 164 60-226 380-544 (618)
230 PRK11652 emrD multidrug resist 98.7 8.3E-07 1.8E-11 80.9 17.2 126 77-205 234-362 (394)
231 PRK11462 putative transporter; 98.7 1E-06 2.2E-11 81.8 16.9 111 91-201 266-385 (460)
232 TIGR00886 2A0108 nitrite extru 98.6 6.7E-08 1.5E-12 87.1 7.3 116 71-189 245-365 (366)
233 COG0738 FucP Fucose permease [ 98.6 3.7E-07 8.1E-12 79.4 11.1 168 49-222 234-402 (422)
234 PRK10207 dipeptide/tripeptide 98.6 1E-06 2.2E-11 82.2 14.7 135 91-225 312-472 (489)
235 PF03209 PUCC: PUCC protein; 98.6 1.6E-06 3.4E-11 76.2 14.3 146 78-225 236-394 (403)
236 PF06963 FPN1: Ferroportin1 (F 98.6 4.1E-05 8.9E-10 69.3 22.6 304 53-366 4-338 (432)
237 PF05978 UNC-93: Ion channel r 98.6 3.5E-06 7.5E-11 64.8 13.5 106 94-200 43-148 (156)
238 KOG0255 Synaptic vesicle trans 98.6 3.2E-06 6.9E-11 80.1 16.3 140 92-232 354-496 (521)
239 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00023 5.1E-09 65.6 22.7 285 47-357 20-355 (491)
240 PRK15403 multidrug efflux syst 98.4 2.2E-05 4.7E-10 72.0 15.9 143 72-219 239-387 (413)
241 PF12832 MFS_1_like: MFS_1 lik 98.3 1.9E-06 4.2E-11 57.5 6.5 70 57-128 6-75 (77)
242 TIGR01301 GPH_sucrose GPH fami 98.3 9.3E-06 2E-10 74.7 12.2 140 92-231 309-474 (477)
243 KOG4332 Predicted sugar transp 98.3 7.3E-06 1.6E-10 67.3 9.8 266 69-371 55-334 (454)
244 PF06609 TRI12: Fungal trichot 98.2 2.3E-05 4.9E-10 73.6 13.2 146 51-196 310-460 (599)
245 PTZ00207 hypothetical protein; 98.2 2.1E-05 4.5E-10 74.1 12.6 178 52-231 354-555 (591)
246 COG3202 ATP/ADP translocase [E 98.2 0.0014 3.1E-08 59.1 22.7 288 47-364 23-365 (509)
247 KOG3574 Acetyl-CoA transporter 98.2 0.00018 3.9E-09 62.4 16.1 151 46-201 26-193 (510)
248 KOG2533 Permease of the major 98.1 9.2E-05 2E-09 68.5 14.4 159 52-213 274-440 (495)
249 KOG3810 Micronutrient transpor 98.1 2.6E-05 5.7E-10 66.5 9.6 287 74-371 28-323 (433)
250 PF02487 CLN3: CLN3 protein; 98.0 0.00013 2.9E-09 64.9 12.0 130 93-228 64-194 (402)
251 KOG2816 Predicted transporter 97.9 0.00016 3.4E-09 66.4 12.1 123 75-200 266-389 (463)
252 PRK15462 dipeptide/tripeptide 97.9 0.00053 1.1E-08 63.6 15.1 110 91-200 311-437 (493)
253 KOG2615 Permease of the major 97.8 0.00017 3.7E-09 62.7 9.6 122 79-202 290-413 (451)
254 PF00854 PTR2: POT family; In 97.7 0.00027 5.9E-09 63.8 9.6 109 119-228 2-122 (372)
255 PF02487 CLN3: CLN3 protein; 97.7 0.00026 5.7E-09 63.1 9.1 107 91-201 284-395 (402)
256 PF12832 MFS_1_like: MFS_1 lik 97.5 0.00075 1.6E-08 45.1 6.8 66 294-360 9-74 (77)
257 PRK03612 spermidine synthase; 97.4 0.02 4.3E-07 54.0 18.2 133 80-216 44-185 (521)
258 KOG1237 H+/oligopeptide sympor 97.4 0.0071 1.5E-07 57.3 14.6 155 68-225 55-241 (571)
259 KOG3098 Uncharacterized conser 97.2 0.017 3.8E-07 52.7 15.1 101 99-200 290-411 (461)
260 PF06963 FPN1: Ferroportin1 (F 97.1 0.0083 1.8E-07 54.6 11.8 146 53-200 260-415 (432)
261 COG3104 PTR2 Dipeptide/tripept 97.1 0.031 6.7E-07 51.0 15.1 133 91-224 327-482 (498)
262 KOG3097 Predicted membrane pro 97.0 0.087 1.9E-06 45.4 16.2 73 98-171 68-140 (390)
263 KOG1479 Nucleoside transporter 97.0 0.15 3.2E-06 45.6 18.3 168 61-233 28-208 (406)
264 TIGR00939 2a57 Equilibrative N 96.8 0.035 7.6E-07 51.1 13.6 89 140-233 105-200 (437)
265 PF03092 BT1: BT1 family; Int 96.8 0.0046 9.9E-08 57.0 7.7 142 90-231 257-415 (433)
266 PF13000 Acatn: Acetyl-coenzym 96.6 0.014 2.9E-07 53.2 8.9 144 54-201 3-178 (544)
267 TIGR00806 rfc RFC reduced fola 96.6 0.012 2.6E-07 53.8 8.4 70 306-375 46-116 (511)
268 KOG3762 Predicted transporter 96.3 0.0038 8.3E-08 57.1 3.5 84 53-138 13-97 (618)
269 PF07672 MFS_Mycoplasma: Mycop 96.2 0.022 4.8E-07 47.3 7.3 102 173-298 2-107 (267)
270 KOG1330 Sugar transporter/spin 96.2 0.016 3.5E-07 52.2 6.9 100 288-390 32-134 (493)
271 PF03137 OATP: Organic Anion T 96.1 0.0016 3.4E-08 61.5 0.0 151 51-203 305-514 (539)
272 TIGR00880 2_A_01_02 Multidrug 96.0 0.097 2.1E-06 39.2 10.0 46 323-368 89-134 (141)
273 TIGR00939 2a57 Equilibrative N 96.0 0.062 1.3E-06 49.5 10.1 106 92-198 311-429 (437)
274 KOG2563 Permease of the major 95.9 0.016 3.6E-07 51.9 5.6 141 91-231 304-452 (480)
275 PF06813 Nodulin-like: Nodulin 95.5 0.18 3.8E-06 42.4 10.0 73 302-375 15-90 (250)
276 PF05631 DUF791: Protein of un 95.4 0.15 3.2E-06 44.8 9.3 51 317-367 65-115 (354)
277 TIGR00805 oat sodium-independe 95.3 0.021 4.6E-07 55.4 4.4 62 311-372 58-119 (633)
278 KOG2325 Predicted transporter/ 95.1 0.033 7.1E-07 51.2 4.9 81 143-224 389-470 (488)
279 PF01770 Folate_carrier: Reduc 94.8 0.32 7E-06 43.9 10.1 95 90-184 287-383 (412)
280 PF01733 Nucleoside_tran: Nucl 94.8 0.01 2.2E-07 52.0 0.6 108 92-199 186-306 (309)
281 PF06779 DUF1228: Protein of u 94.6 0.19 4.2E-06 34.0 6.3 58 317-374 23-80 (85)
282 KOG1479 Nucleoside transporter 92.6 1.4 3.1E-05 39.6 9.9 106 91-197 285-399 (406)
283 KOG0637 Sucrose transporter an 91.7 0.18 3.9E-06 45.7 3.4 127 92-218 336-485 (498)
284 TIGR00926 2A1704 Peptide:H+ sy 91.2 0.57 1.2E-05 45.6 6.5 68 305-372 7-75 (654)
285 KOG3880 Predicted small molecu 88.3 2.8 6.1E-05 36.2 7.5 118 78-201 279-402 (409)
286 PF01733 Nucleoside_tran: Nucl 88.3 0.14 3.1E-06 44.8 0.0 19 326-344 187-205 (309)
287 KOG4332 Predicted sugar transp 87.2 12 0.00026 31.9 10.3 138 85-223 279-425 (454)
288 PF05978 UNC-93: Ion channel r 87.1 7 0.00015 30.2 8.6 44 326-369 42-85 (156)
289 KOG2881 Predicted membrane pro 82.0 29 0.00063 29.1 12.5 36 331-366 250-285 (294)
290 COG0477 ProP Permeases of the 80.8 7.4 0.00016 33.3 7.4 50 323-372 41-90 (338)
291 PF02990 EMP70: Endomembrane p 80.7 21 0.00045 34.1 10.6 72 277-349 250-325 (521)
292 PF06912 DUF1275: Protein of u 77.9 37 0.00079 27.7 15.3 20 92-111 50-69 (209)
293 PF07672 MFS_Mycoplasma: Mycop 76.7 35 0.00076 28.9 9.4 100 92-192 145-254 (267)
294 KOG4830 Predicted sugar transp 75.7 0.31 6.7E-06 40.6 -2.6 63 57-121 23-94 (412)
295 PF03219 TLC: TLC ATP/ADP tran 74.9 77 0.0017 30.0 13.8 70 149-219 290-360 (491)
296 COG4262 Predicted spermidine s 73.7 67 0.0015 28.7 12.3 95 73-168 29-132 (508)
297 PF13000 Acatn: Acetyl-coenzym 72.9 14 0.0003 34.5 6.7 48 144-191 408-455 (544)
298 COG5336 Uncharacterized protei 72.1 23 0.0005 25.1 6.1 38 331-368 52-90 (116)
299 TIGR00769 AAA ADP/ATP carrier 71.3 92 0.002 29.3 15.5 72 148-220 273-345 (472)
300 COG5336 Uncharacterized protei 70.3 23 0.0005 25.1 5.8 28 95-122 49-77 (116)
301 COG3619 Predicted membrane pro 70.3 62 0.0013 26.8 16.5 119 87-205 54-196 (226)
302 KOG3810 Micronutrient transpor 69.2 36 0.00078 30.4 8.0 110 90-202 273-384 (433)
303 COG2233 UraA Xanthine/uracil p 67.5 1.1E+02 0.0023 28.5 11.5 125 52-180 17-144 (451)
304 PF07857 DUF1632: CEO family ( 65.0 87 0.0019 26.6 9.9 23 208-230 115-137 (254)
305 PF02694 UPF0060: Uncharacteri 64.4 19 0.0004 25.5 4.5 51 321-371 54-104 (107)
306 KOG2601 Iron transporter [Inor 64.4 1.1E+02 0.0025 27.7 11.5 149 55-209 31-206 (503)
307 PRK02237 hypothetical protein; 61.6 34 0.00073 24.3 5.3 50 322-371 57-106 (109)
308 KOG1237 H+/oligopeptide sympor 59.1 85 0.0018 30.4 9.5 77 296-372 48-125 (571)
309 PF04346 EutH: Ethanolamine ut 58.0 1.4E+02 0.003 26.7 13.0 95 103-197 61-161 (354)
310 PF02632 BioY: BioY family; I 57.5 57 0.0012 25.0 6.6 41 94-134 59-99 (148)
311 COG4769 Predicted membrane pro 57.1 29 0.00063 26.8 4.8 54 96-155 81-134 (181)
312 KOG3880 Predicted small molecu 56.1 8 0.00017 33.6 1.9 131 92-228 66-198 (409)
313 PF11947 DUF3464: Protein of u 54.2 86 0.0019 24.1 6.9 51 139-192 95-145 (153)
314 COG1268 BioY Uncharacterized c 51.7 62 0.0013 25.8 6.1 24 94-117 88-111 (184)
315 KOG1277 Endosomal membrane pro 50.7 1.2E+02 0.0026 28.0 8.2 16 278-293 282-297 (593)
316 COG1288 Predicted membrane pro 48.6 2.3E+02 0.0049 26.3 10.8 73 122-195 358-438 (481)
317 PTZ00101 rhomboid-1 protease; 47.8 1.8E+02 0.004 25.1 13.6 38 99-136 119-157 (278)
318 PF11151 DUF2929: Protein of u 47.7 66 0.0014 19.9 5.0 43 188-231 13-55 (57)
319 PF02694 UPF0060: Uncharacteri 46.8 47 0.001 23.6 4.2 47 91-137 57-103 (107)
320 PF06645 SPC12: Microsomal sig 46.4 85 0.0018 20.8 5.3 10 141-150 38-47 (76)
321 PRK10263 DNA translocase FtsK; 41.8 1.8E+02 0.004 31.2 9.0 19 98-116 62-80 (1355)
322 PRK02237 hypothetical protein; 41.8 82 0.0018 22.5 4.7 47 91-137 59-105 (109)
323 KOG3626 Organic anion transpor 41.5 22 0.00047 35.1 2.6 63 310-372 121-183 (735)
324 KOG1397 Ca2+/H+ antiporter VCX 41.2 34 0.00073 30.6 3.4 44 44-88 284-327 (441)
325 COG2076 EmrE Membrane transpor 40.8 1.3E+02 0.0029 21.4 7.3 32 342-373 21-52 (106)
326 PF02535 Zip: ZIP Zinc transpo 39.4 2.6E+02 0.0057 24.4 10.0 30 142-171 261-291 (317)
327 PF11299 DUF3100: Protein of u 39.0 19 0.00041 29.6 1.5 49 149-198 179-227 (241)
328 PLN02332 membrane bound O-acyl 38.5 2.2E+02 0.0049 26.8 8.6 111 116-230 339-453 (465)
329 PF10785 NADH-u_ox-rdase: NADH 36.7 1.4E+02 0.003 20.4 5.5 42 100-141 30-78 (86)
330 TIGR02230 ATPase_gene1 F0F1-AT 36.1 1.6E+02 0.0034 20.9 6.4 13 339-351 61-73 (100)
331 TIGR00801 ncs2 uracil-xanthine 36.1 3.6E+02 0.0077 25.0 13.2 121 54-180 8-133 (415)
332 PRK14229 camphor resistance pr 35.9 1.6E+02 0.0036 21.1 7.3 24 148-171 56-79 (108)
333 PF08570 DUF1761: Protein of u 35.2 1.8E+02 0.0039 21.4 8.6 33 54-88 5-38 (126)
334 PF00860 Xan_ur_permease: Perm 35.1 1.1E+02 0.0024 27.9 6.0 94 81-180 29-129 (389)
335 PRK11469 hypothetical protein; 35.0 2.1E+02 0.0046 23.0 6.9 89 35-131 90-178 (188)
336 PF04281 Tom22: Mitochondrial 34.7 1.5E+02 0.0032 22.4 5.5 27 165-191 59-85 (137)
337 TIGR01666 YCCS hypothetical me 33.7 5.1E+02 0.011 26.1 10.9 49 108-156 43-96 (704)
338 KOG1278 Endosomal membrane pro 33.2 81 0.0017 29.9 4.6 30 319-348 357-386 (628)
339 PF13937 DUF4212: Domain of un 33.2 84 0.0018 21.2 3.6 21 99-119 57-77 (81)
340 KOG3500 Vacuolar H+-ATPase V0 32.3 1E+02 0.0022 20.6 3.7 42 329-370 9-50 (84)
341 PF07456 Hpre_diP_synt_I: Hept 31.6 1.8E+02 0.004 22.3 5.7 52 95-152 68-119 (148)
342 TIGR01667 YCCS_YHJK integral m 31.2 5.1E+02 0.011 26.1 10.1 52 107-158 42-98 (701)
343 COG1288 Predicted membrane pro 29.4 4.7E+02 0.01 24.4 11.6 101 116-225 132-236 (481)
344 PRK00293 dipZ thiol:disulfide 28.0 5.7E+02 0.012 24.9 14.4 45 325-369 329-380 (571)
345 PRK10599 calcium/sodium:proton 27.1 4.8E+02 0.01 23.7 8.9 36 57-94 228-263 (366)
346 PRK10692 hypothetical protein; 26.7 1.3E+02 0.0028 20.4 3.5 17 117-133 3-19 (92)
347 PF06570 DUF1129: Protein of u 26.3 3.6E+02 0.0078 22.0 11.0 26 285-310 76-101 (206)
348 KOG2765 Predicted membrane pro 25.9 86 0.0019 28.1 3.4 15 112-126 208-222 (416)
349 TIGR02230 ATPase_gene1 F0F1-AT 25.4 2.5E+02 0.0054 19.9 6.1 24 106-129 60-84 (100)
350 PF07760 DUF1616: Protein of u 25.3 4.5E+02 0.0098 22.8 8.0 57 144-201 22-78 (287)
351 COG1268 BioY Uncharacterized c 25.3 2.4E+02 0.0052 22.6 5.5 21 330-350 91-111 (184)
352 PF13940 Ldr_toxin: Toxin Ldr, 25.0 1.2E+02 0.0027 16.2 2.9 20 328-347 15-34 (35)
353 COG1742 Uncharacterized conser 24.7 1.1E+02 0.0025 21.6 3.2 49 322-370 56-104 (109)
354 TIGR02840 spore_YtaF putative 23.8 4.1E+02 0.0088 21.7 7.0 28 103-131 173-202 (206)
355 PF11947 DUF3464: Protein of u 23.4 1.2E+02 0.0027 23.3 3.5 28 91-118 99-126 (153)
356 TIGR03802 Asp_Ala_antiprt aspa 23.3 7E+02 0.015 24.3 10.3 82 90-173 452-534 (562)
357 PF08551 DUF1751: Eukaryotic i 23.3 2.7E+02 0.0058 19.6 5.0 34 102-135 28-62 (99)
358 TIGR00367 K+-dependent Na+/Ca+ 23.0 4.1E+02 0.009 23.3 7.3 58 56-117 175-232 (307)
359 PF04550 Phage_holin_2: Phage 22.6 1.9E+02 0.0041 19.8 3.8 33 139-171 29-61 (89)
360 PRK10720 uracil transporter; P 22.4 5.5E+02 0.012 23.9 8.2 52 114-166 298-352 (428)
361 PRK03612 spermidine synthase; 22.2 7.1E+02 0.015 23.9 16.8 29 322-350 146-175 (521)
362 PRK10263 DNA translocase FtsK; 21.2 4.6E+02 0.01 28.4 7.9 39 331-369 141-179 (1355)
363 PF12273 RCR: Chitin synthesis 21.2 38 0.00082 25.2 0.4 16 208-223 1-16 (130)
364 PRK10734 putative calcium/sodi 21.2 4.8E+02 0.01 23.2 7.3 54 65-122 188-241 (325)
365 TIGR03647 Na_symport_sm probab 21.1 2.7E+02 0.0058 18.6 4.8 21 99-119 53-73 (77)
366 PF02990 EMP70: Endomembrane p 21.1 2.1E+02 0.0045 27.5 5.4 42 170-211 290-333 (521)
367 PF00854 PTR2: POT family; In 21.0 2.4E+02 0.0051 25.4 5.6 78 61-138 41-122 (372)
368 TIGR00986 3a0801s05tom22 mitoc 20.8 3.3E+02 0.0072 20.7 5.1 26 165-190 57-82 (145)
369 TIGR00846 caca2 calcium/proton 20.7 5E+02 0.011 23.5 7.4 37 52-88 222-258 (365)
370 PF07281 INSIG: Insulin-induce 20.6 4.6E+02 0.01 21.2 6.4 82 144-231 46-127 (193)
371 PRK09541 emrE multidrug efflux 20.3 3.4E+02 0.0074 19.5 7.7 21 331-351 37-57 (110)
372 PRK14200 camphor resistance pr 20.2 3.7E+02 0.0081 19.9 7.9 24 148-171 69-92 (127)
373 KOG3574 Acetyl-CoA transporter 20.1 5.1E+02 0.011 24.0 7.0 59 147-205 375-433 (510)
374 PF15050 SCIMP: SCIMP protein 20.0 64 0.0014 23.3 1.3 12 205-216 2-13 (133)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-35 Score=256.81 Aligned_cols=291 Identities=22% Similarity=0.257 Sum_probs=255.5
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+..+..+..+.++.|..+....+...++|++++|+|++..+. |+..|+|.++.+++.++...+.||+.||++++..+.
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~a--G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~ 86 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAA--GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLA 86 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHH
Confidence 334556778888999999999999999999999999998888 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch
Q 016350 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (391)
++.++++++++++||+.++++|++.|+..|..++...++..+..|+++|++++++...+..++.++|.++|.++.+..|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G- 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFG- 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccccc
Q 016350 207 WRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR 285 (391)
Q Consensus 207 w~~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
||+.|++.+..+++..+.. ..+| |+ +.+ ++...+..+..+++++|
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP--~~----~~~----------------------------~~~~~~~~~~~~~l~~p 211 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP--PS----EIS----------------------------GSLPGPLRTLLRLLRRP 211 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--Cc----cCC----------------------------CCCCcchhHHHHHhcCc
Confidence 9999999888888776654 5567 11 000 00111122244577889
Q ss_pred chhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 016350 286 HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM 365 (391)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (391)
..+..++..++.+...+..++++..++++..+.+....++.+..+++++++|++++|++.|| +.|+.+.....+.++..
T Consensus 212 ~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~ 290 (394)
T COG2814 212 GVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALAL 290 (394)
T ss_pred hHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888899999999999999999999999 88888888888888887
Q ss_pred HHHHHHhccC
Q 016350 366 AIQVAASSSY 375 (391)
Q Consensus 366 ~~~~~~~~~~ 375 (391)
+.+.+.....
T Consensus 291 l~l~~~~~~~ 300 (394)
T COG2814 291 LALTFTGASP 300 (394)
T ss_pred HHHHHhcchH
Confidence 7777666554
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=4.6e-35 Score=277.80 Aligned_cols=206 Identities=20% Similarity=0.269 Sum_probs=185.2
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+..|..++++.++.+..+++...++..+|.+.++++++..+. +++.+++.++.+++++++|+++||+|||++++++++
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~--g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~li 240 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGK--GMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLS 240 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 556667777888888889999999999999999999987766 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc---
Q 016350 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI--- 203 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--- 203 (391)
+.++++++++++++++.++++|+++|++.|+..+....++.|++|+++|++.+++...++.+|.++++.++..+...
T Consensus 241 l~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~ 320 (742)
T TIGR01299 241 VNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGW 320 (742)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998776544322
Q ss_pred ----------cchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCC
Q 016350 204 ----------AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGS 255 (391)
Q Consensus 204 ----------~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (391)
.+ ||+.+++.+++.++.++..+++||+|+|+..+++.+++.+.++++...+
T Consensus 321 ~~~~g~~~~~~g-WR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 321 SFQMGSAYQFHS-WRVFVIVCAFPCVFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred hhcccccccccc-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 24 9999999888888888788889999999999999999999888877654
No 3
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=5.6e-34 Score=265.57 Aligned_cols=320 Identities=13% Similarity=0.034 Sum_probs=247.5
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
+|..+..++++.++...+.++++..+|.+.+|+|.+.++. +|+.+.|.++++++.+++|+++||+|||++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~--~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNEL--LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4667888899999999999999999999999999988777 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcC-CccccchHHHHHHHHHHHHHHHHHHhccccccccchh
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (391)
+++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|++++++......+|..+||.+++.+.++.+ |
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g-w 160 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY-W 160 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-h
Confidence 999999999999999999999999999999888888787776 67899999999999999999999999999999988 9
Q ss_pred HHHHHHHHHHHHHHHHH-hhccccchhHHHHcCCHHHHHH----------HHHHHhCCCCch-hH----------HHHhh
Q 016350 208 RICFWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEA----------EFEKLLGGSHVK-SS----------LAELS 265 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-~~----------~~~~~ 265 (391)
|+.|++.....++.++. .+++||+++...++.+...... ............ .. .....
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 99999987766665444 4556776431100011000000 000000000000 00 00000
Q ss_pred hcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHH
Q 016350 266 KLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLM 345 (391)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 345 (391)
..+.+ ...+....+++++|.+....+..++..........+.+.|++..++.+..+++....+..++..++.++.|++.
T Consensus 241 ~~e~~-~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLA-ASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhc-CCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 12233335688888888777777776666666666788888888888888899999999999999999999999
Q ss_pred hhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 346 DKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 346 d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
||+|+|+.+..+..+.+++..++....
T Consensus 320 ~r~g~~~~~~~g~~~~~~~~~~l~~~~ 346 (495)
T PRK14995 320 SRLGLRLVATGGMALSALSFYGLAMTD 346 (495)
T ss_pred HHcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 999999988888888887777665543
No 4
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-35 Score=250.74 Aligned_cols=328 Identities=15% Similarity=0.100 Sum_probs=261.5
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 125 (391)
.+.+++.++.+.+++...++.+...+...|.+.+|.++|.+|. |++.+.+.++|.++-++.|.++||.++|..+..++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~l--G~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQL--GILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 3455677888899999999999999999999999999988877 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhc--cccccc
Q 016350 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG--IPVKEI 203 (391)
Q Consensus 126 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~ 203 (391)
++.++.+++.+++++...+.+..+++|...|..+|.+...++.|+|+++||+..++++++.++|..+.|++. +.+..+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999998888888 888877
Q ss_pred cchhHHHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccC-CCCccccchhc
Q 016350 204 AGWWRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRG-DDGDIVKFEEL 281 (391)
Q Consensus 204 ~~~w~~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 281 (391)
.+ ||..|++.++++++..+.. +..+++|+..-... .+|.+. +.. +.. .++.+++ ....+.-.+-+
T Consensus 182 ~~-w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~-ie~~~~-------d~~---e~~-~~~~~~~~ls~~~i~~~YV 248 (448)
T COG2271 182 GG-WRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPP-IEEYRG-------DPL---EIY-EEEKENEGLTAWQIFVKYV 248 (448)
T ss_pred cc-hhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCC-HHHhhc-------Cch---hhh-hhhccCCCccHHHHHHHHH
Confidence 77 9999999988888876655 55677764221110 111000 000 000 0000111 11122345567
Q ss_pred ccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh--CchHHHHH-HH
Q 016350 282 LYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL--GRKALLQW-SF 358 (391)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~-~~ 358 (391)
++||..|.+.+..++....-+....|.|.|+.+..+.+..+++...+.+-.++++|.+++|+++||+ |||....+ ..
T Consensus 249 L~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~ 328 (448)
T COG2271 249 LKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFM 328 (448)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHH
Confidence 8999999999999999999999999999999999999888899999999999999999999999996 56666554 44
Q ss_pred HHHHHHHHHHHHHhccCCCCchHhHHhhhhc
Q 016350 359 FSMAVSMAIQVAASSSYIPGSASLYLSVGGM 389 (391)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 389 (391)
+...++...+...++. +......++.+.|+
T Consensus 329 ~~i~~~~~~~w~~~~~-~~~l~~~~l~~iGf 358 (448)
T COG2271 329 LLITASLVLYWLAPNG-SYLLDAILLFIIGF 358 (448)
T ss_pred HHHHHHHHHHHcCCCc-cHHHHHHHHHHHHH
Confidence 4444555545444443 34444555555554
No 5
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.8e-32 Score=240.34 Aligned_cols=322 Identities=34% Similarity=0.582 Sum_probs=261.4
Q ss_pred hHHHHHHHHHHHHhhhhhhcccchHHHhHh--------hhcc--Ccch--hHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016350 50 FPHVLVATLSSFLFGYHLGVVNEPLESISL--------DLGF--NGNT--LAEGLVVSMCLGGAFIGSTLSGWIADGVGR 117 (391)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--------~~~~--~~~~--~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr 117 (391)
......+.++.+..+++...+++..+.+.+ .+|. ++++ ..++.+++++.+|.++|+++.++++||+||
T Consensus 10 ~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GR 89 (485)
T KOG0569|consen 10 LLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGR 89 (485)
T ss_pred HHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 344455566668888888888887654443 3442 3222 246889999999999999999999999999
Q ss_pred hHHHHHhhHHHHHHHHHHHhh---hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHH
Q 016350 118 RRAFQLCALPMIIGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (391)
Q Consensus 118 r~~l~~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 194 (391)
|..++++.++..++.++..++ +++.+++++|++.|+..|......+.++.|..|++.||....+.+.+..+|.+++.
T Consensus 90 K~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~ 169 (485)
T KOG0569|consen 90 KNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQ 169 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHH
Confidence 999999988888887776554 78899999999999999999999999999999999999999999999999999997
Q ss_pred Hhcc-ccccccchhHHHHHHHHHHHHHHHHHhhccccchhHHHH-cCCHHHHHHHHHHHhCCCCchhHHHHhhh---ccc
Q 016350 195 LIGI-PVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYK-KGRTAEAEAEFEKLLGGSHVKSSLAELSK---LDR 269 (391)
Q Consensus 195 ~~~~-~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 269 (391)
.++. .+......|++.+.+..+++++..+...++||+|+|+.. +++.+++++.++..++.++...+.++..+ .++
T Consensus 170 ~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~ 249 (485)
T KOG0569|consen 170 VLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEE 249 (485)
T ss_pred HHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhc
Confidence 7763 333333339999999999999999999999999999988 79999999999999988765544433222 222
Q ss_pred CCCCccccchhcccccchhH-HHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCCh---hHHHHHHHHHHHHHHHHHHHHH
Q 016350 270 GDDGDIVKFEELLYGRHFRV-VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GLANVFVGIANLLGSVVAMVLM 345 (391)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~ 345 (391)
..+++..++.++++++..+. ..+...+.....+.+.+.+..|..+++...+.+. .+.....++...+.++++.++.
T Consensus 250 ~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~li 329 (485)
T KOG0569|consen 250 LEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLI 329 (485)
T ss_pred cccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33346778999999887664 4556667777788888899999999998877664 4577888999999999999999
Q ss_pred hhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 346 DKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 346 d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
||.|||++++++..++.+..+++...
T Consensus 330 d~~gRRpLll~~~~~~~~~~~~~~~~ 355 (485)
T KOG0569|consen 330 DRLGRRPLLLISLSLMAVALLLMSIA 355 (485)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888887776643
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.6e-33 Score=254.31 Aligned_cols=311 Identities=14% Similarity=0.096 Sum_probs=225.7
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
|.+|+.+.+++++++.++++...++...|.+.+|+|++.++. |++.+++.+++++++++.|+++||+|||+++..+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~ 81 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMF--GLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMV 81 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHH
Confidence 345777888888999999999999999999999999998877 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc----
Q 016350 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE---- 202 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---- 202 (391)
+++++++++++++|++++++.|+++|++.+...+....++.|++|+++|++++++++.+..+|..+++.+++.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 82 LWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999887753
Q ss_pred --ccchhHHHHHHHHHHHHHHHH-HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccch
Q 016350 203 --IAGWWRICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFE 279 (391)
Q Consensus 203 --~~~~w~~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (391)
..+ ||+.|++.+++.++..+ .++++||+|+.... ..+++.+...+.........++.. ...++.+......++
T Consensus 162 ~~~~g-wr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 237 (412)
T TIGR02332 162 MALKG-WQWLFLLEGFPSVILGVMTWFWLDDSPDKAKW-LDEEDKKALKEMIDNDQLTLEQPE--GAFAHAAMPQRSMLR 237 (412)
T ss_pred CCccc-hhHHHHHHHHHHHHHHHHHhhccCCCcccCCC-CCHHHHHHHHHHHHhccccccccc--cccccccccHHHHHH
Confidence 246 99999998877766544 44667888742100 001111111111100000000000 000000000111233
Q ss_pred hcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHH-HhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHH-HHHH
Q 016350 280 ELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV-FKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKAL-LQWS 357 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-~~~~ 357 (391)
+++ ++.++...+..++.....+....+.|.|+.+. .+.+....+.......++..++.++.|+++||+++|+. ....
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~ 316 (412)
T TIGR02332 238 EIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALP 316 (412)
T ss_pred Hhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHH
Confidence 344 46666666655555555555566677776552 12333456677888899999999999999999997764 3334
Q ss_pred HHHHHHH
Q 016350 358 FFSMAVS 364 (391)
Q Consensus 358 ~~~~~~~ 364 (391)
.....++
T Consensus 317 ~~~~~~~ 323 (412)
T TIGR02332 317 YLFAAAG 323 (412)
T ss_pred HHHHHHH
Confidence 4344433
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.4e-32 Score=256.06 Aligned_cols=291 Identities=18% Similarity=0.202 Sum_probs=207.8
Q ss_pred hHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhH--HHH--HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 016350 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLA--EGL--VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (391)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~--~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 125 (391)
++.+....++.+++.++...++...|.+.++++.+.++.. .+. +.++..+++.+++++.|+++||+|||+++..+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 3456677889999999999999999999999976554321 111 247778999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHH--------HHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhc
Q 016350 126 LPMIIGASISATTRNLIG--------MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (391)
Q Consensus 126 ~~~~i~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 197 (391)
++++++++++++++|+.+ ++++|+++|++.|..++....+++|++|+++||++.++...+..+|..+++.+.
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 788999999999999999999999999999999999999988888888777654
Q ss_pred cccc--------cccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhccc
Q 016350 198 IPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDR 269 (391)
Q Consensus 198 ~~l~--------~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
..+. ...| ||+.|++.+++.++..+....+||+|++...+++.++..+ +.
T Consensus 175 ~~~~~~~~~~~~~~~g-WR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~---------------------~~ 232 (490)
T PRK10642 175 VLISTIVGEANFLDWG-WRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR---------------------EG 232 (490)
T ss_pred HHHHHhcCHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc---------------------cc
Confidence 3322 2456 9999999877666655555678999876533221111000 00
Q ss_pred CCCCccccchhcccccchhHHHH---HHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 016350 270 GDDGDIVKFEELLYGRHFRVVFI---GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD 346 (391)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 346 (391)
..+.+..++++++++ +.+.... ..++.....+....+.|.|+.+.++.+....+.......++..++.++.|+++|
T Consensus 233 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d 311 (490)
T PRK10642 233 LQDGPKVSFKEIATK-HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSD 311 (490)
T ss_pred ccccccCCHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000112234455543 1122111 112222333344455666665544444333455666677888899999999999
Q ss_pred hhCchHHHHHHHHHHHH
Q 016350 347 KLGRKALLQWSFFSMAV 363 (391)
Q Consensus 347 ~~~~~~~~~~~~~~~~~ 363 (391)
|+|||+.+..+.+...+
T Consensus 312 r~grr~~~~~~~~~~~~ 328 (490)
T PRK10642 312 RFGRRPFVILGSVALFV 328 (490)
T ss_pred HhccHHHHHHHHHHHHH
Confidence 99999988777654443
No 8
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=5.2e-32 Score=252.73 Aligned_cols=319 Identities=29% Similarity=0.504 Sum_probs=232.1
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhh--------ccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDL--------GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR 118 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr 118 (391)
+...+..++..++.+.++++...+++..|.+.+++ +.+..+. +++.+++.++..++++++|+++||+|||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~~~ig~~~~~~~~G~l~dr~Grr 85 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLL--GFCVASALIGCIIGGALGGYCSNRFGRR 85 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 44566677778889999999999999999999988 6555555 8999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHhh------------hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHH
Q 016350 119 RAFQLCALPMIIGASISATT------------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIAT 186 (391)
Q Consensus 119 ~~l~~~~~~~~i~~~~~~~~------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 186 (391)
++++.+.++++++.+.++++ +++..++++|+++|++.|...+...++++|++|+++|++++++.+.+.
T Consensus 86 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~ 165 (479)
T PRK10077 86 DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAI 165 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHH
Confidence 99999999999998888763 235678899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccc--------cccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCch
Q 016350 187 CLGLMGSLLIGIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVK 258 (391)
Q Consensus 187 ~~g~~~~~~~~~~l~--------~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (391)
.+|..+++.+++.+. +..+ ||+.|++.+++.++..+..+++||+|+++..+++.++.++..++..+.....
T Consensus 166 ~~G~~~~~~~~~~~~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 244 (479)
T PRK10077 166 IFGQLVVYFVNYFIARSGDASWLNTDG-WRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLAT 244 (479)
T ss_pred HHHHHHHHHHHHHHhccCcccccccCC-hHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHH
Confidence 999998887765432 3446 9999999888887777777889999998877777776665555544333222
Q ss_pred hHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCC---ChhHHHHHHHHHHH
Q 016350 259 SSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANL 335 (391)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 335 (391)
...++..+..+.+.. .....+. ..............+......+...+|.+...+..+. .........++..+
T Consensus 245 ~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~ 320 (479)
T PRK10077 245 QALQEIKHSLDHGRK---TGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINL 320 (479)
T ss_pred HHHHHHHHHHHHhhh---hhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHH
Confidence 222221111000000 0011111 0111111111222222233333444555655544443 34456667788899
Q ss_pred HHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 336 LGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 336 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
++.+++++++||+|||+++..+..+++++.+.+....
T Consensus 321 i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~ 357 (479)
T PRK10077 321 TFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAF 357 (479)
T ss_pred HHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998888887776543
No 9
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.7e-32 Score=256.36 Aligned_cols=323 Identities=17% Similarity=0.217 Sum_probs=225.5
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhcc---CcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHH
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGF---NGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ 122 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~ 122 (391)
.+.++..+.++.++.+.++++...++...|.+.+++.. ..+..+.+++.+.+.++..++++++|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 45566777788889999999999999999988775311 112223489999999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHhhhh------HHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHh
Q 016350 123 LCALPMIIGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (391)
Q Consensus 123 ~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 196 (391)
.+.++..++.++++++++ +..++++|+++|++.|...+....+++|++|+++|++++++.+....+|.++++.+
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988865 78999999999999999999999999999999999999999999999999888887
Q ss_pred cccccc-----------------------ccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHH-HHHHHHHHHh
Q 016350 197 GIPVKE-----------------------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTA-EAEAEFEKLL 252 (391)
Q Consensus 197 ~~~l~~-----------------------~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~ 252 (391)
+..+.. ..+ ||+.|.+.+++.++..+..+++||+|+|+..+++++ ++.+.+.+..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~ 249 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYM-WRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVL 249 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhccc-HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHh
Confidence 654321 124 999999988888887777888999999998877764 3555555443
Q ss_pred CCCCchhHHHHhhhcccCCCCccccchhccccc---chhHHHHH-HHHH---HHHhhhchhhHHHhHHHHHhhcCCChhH
Q 016350 253 GGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR---HFRVVFIG-STLF---ALQQLSGINAIFYFSSSVFKSAGLSSGL 325 (391)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (391)
+.+...+ .++.++.+++++....+++++++++ +.+...+. .... .+..+....+.|.++.. .+.+....+.
T Consensus 250 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~ 327 (502)
T TIGR00887 250 QVKIEAE-PDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATN 327 (502)
T ss_pred ccccccC-cccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccch
Confidence 3211110 1111111111111123566776532 22122221 1111 11222222233333332 2322211110
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 326 ------------ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 326 ------------~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
......++.+++.+++++++||+|||+++.++..++++++.++.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 328 NAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 2333445667788999999999999999988887777776666543
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.5e-32 Score=247.78 Aligned_cols=280 Identities=17% Similarity=0.180 Sum_probs=217.5
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
+|..+..+.++.+..........+.+|.+.+|+|.+.++. |++.+.+.+++.+++++.|+++||+|||+++..+.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQV--GLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3444555555555555555556677899999999988877 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
+++++.+++++|++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|..++|.+++.+.+..+ ||
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g-w~ 163 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLG-WR 163 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888 99
Q ss_pred HHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccch
Q 016350 209 ICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (391)
Q Consensus 209 ~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
+.|++.++..++..+.. .+.||+|+ + ++++ ..+.+++++++.+
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~----~-~~~~-------------------------------~~~~~~~~~~~~~ 207 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPS----E-HSGS-------------------------------LKSLPLLFRRPAL 207 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCC----C-Ccch-------------------------------HHHHHHHHhCcHH
Confidence 99999887776655443 44555432 0 0000 0123456677777
Q ss_pred hHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 016350 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 367 (391)
+......++.....+....+.+.|..+..+.+....+.......++.++++++.+++.||++||.. ..+..+..++...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~ 286 (390)
T PRK03545 208 VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLL 286 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHH
Confidence 766555555554444445556666665556566667778888899999999999999999998764 4444444444433
Q ss_pred H
Q 016350 368 Q 368 (391)
Q Consensus 368 ~ 368 (391)
+
T Consensus 287 l 287 (390)
T PRK03545 287 L 287 (390)
T ss_pred H
Confidence 3
No 11
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=3e-31 Score=247.75 Aligned_cols=322 Identities=31% Similarity=0.576 Sum_probs=231.7
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccC------cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFN------GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA 120 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~ 120 (391)
++.+...+++.++.+...++...+.+..|.+..+++.+ .++.+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 33444555666677888889999999999999999887 334445999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHhh---hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhc
Q 016350 121 FQLCALPMIIGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (391)
Q Consensus 121 l~~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 197 (391)
++.+.++++++.+++.+. .+++.++++|+++|++.+...+....++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999998654 34568999999999999999999999999999999999999999999999999999999
Q ss_pred ---cccccccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHH-h---h-hccc
Q 016350 198 ---IPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAE-L---S-KLDR 269 (391)
Q Consensus 198 ---~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~ 269 (391)
....+..+ ||+.|++.++..++..+..+++||+|++...+++.++..+..++....+.......+ . . ..+.
T Consensus 184 ~~~~~~~~~~~-w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (481)
T TIGR00879 184 SGKVSLNNTLG-WRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSI 262 (481)
T ss_pred HHhhcCCCCcc-HHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 66666667 999999977777777667788999988776666655544444433322211111100 0 0 0000
Q ss_pred CCCCccccchhccccc--chhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCC---ChhHHHHHHHHHHHHHHHHHHHH
Q 016350 270 GDDGDIVKFEELLYGR--HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVL 344 (391)
Q Consensus 270 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l 344 (391)
+.......+.++++.. ..+..+....+..+...........+.+...+..+. ..+.......++.+++.++.+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l 342 (481)
T TIGR00879 263 EKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFL 342 (481)
T ss_pred HHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000111133333221 123333333333333333333444455544444343 34667778888999999999999
Q ss_pred HhhhCchHHHHHHHHHHHHHHHHHH
Q 016350 345 MDKLGRKALLQWSFFSMAVSMAIQV 369 (391)
Q Consensus 345 ~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (391)
.||++||+.+.++..+.+++++++.
T Consensus 343 ~d~~~~~~~~~~~~~~~~~~~~~~~ 367 (481)
T TIGR00879 343 VDRFGRRPLLLIGAAGMAICLFVLG 367 (481)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888777777666
No 12
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.8e-31 Score=249.55 Aligned_cols=327 Identities=33% Similarity=0.576 Sum_probs=262.7
Q ss_pred chhhHHHHHHHHHHHHhhhh--hhcccchHHHhHhhhccCcc---h--hHHHHHHHHHHHHHHHHHHHHHHhhhcchhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYH--LGVVNEPLESISLDLGFNGN---T--LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR 119 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~---~--~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~ 119 (391)
+...........+.+..+++ ....++....+.++...+.. + .+.+|+.+++.++..++++++|+++|++|||+
T Consensus 41 ~~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~ 120 (513)
T KOG0254|consen 41 PFVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKK 120 (513)
T ss_pred eehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 34444555566667777775 55667777777775432211 1 23489999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccc
Q 016350 120 AFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (391)
Q Consensus 120 ~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 199 (391)
.++.+.+.+.++.+++++++|+.+++++|+++|+|.|......+.+++|..|++.||...+..+....+|..++..++..
T Consensus 121 ~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~ 200 (513)
T KOG0254|consen 121 TLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG 200 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999777666
Q ss_pred cccc-cchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhC--CCCchhHHHHhhhcc---cCCCC
Q 016350 200 VKEI-AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLG--GSHVKSSLAELSKLD---RGDDG 273 (391)
Q Consensus 200 l~~~-~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---~~~~~ 273 (391)
..+. .+ ||..+.+..+++++..+..++.||+|+|+.++++.+++++.++.+.+ ..+...+..+..... .....
T Consensus 201 ~~~~~~~-Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (513)
T KOG0254|consen 201 TSKVYAG-WRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAE 279 (513)
T ss_pred hccCCcc-HHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccc
Confidence 5543 35 99999999999999888888899999999999999999999999988 333333333333111 11111
Q ss_pred ccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCCh--hHHHHHHHHHHHHHHHHHHHHHhhhCch
Q 016350 274 DIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS--GLANVFVGIANLLGSVVAMVLMDKLGRK 351 (391)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 351 (391)
....+.++++.+..+...+...+..+.++.+.+...+|.+.+++..+... .......++..+++.+++.++.||+|||
T Consensus 280 ~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr 359 (513)
T KOG0254|consen 280 GKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRR 359 (513)
T ss_pred ccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 11235556665566677778888888888888999999999998887764 4566777888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Q 016350 352 ALLQWSFFSMAVSMAIQVAASSS 374 (391)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~ 374 (391)
+.++.+...+.++++++......
T Consensus 360 ~lll~s~~~m~~~~~~~~~~~~~ 382 (513)
T KOG0254|consen 360 KLLLFGAAGMSICLVILAVVGVF 382 (513)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999999888765433
No 13
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=8.6e-32 Score=247.18 Aligned_cols=282 Identities=18% Similarity=0.110 Sum_probs=203.0
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCc-chhHHHHHHH---HHHHHHHHHHHHHHHhhhcchhhHHHHHh
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNG-NTLAEGLVVS---MCLGGAFIGSTLSGWIADGVGRRRAFQLC 124 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~s---~~~~~~~i~~~~~g~l~dr~Grr~~l~~~ 124 (391)
++..+...+++.+++.++...++...|.+.++++.+. +..+.+...+ ...++..++++++|+++||+|||+++..+
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 20 RIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3445566678889999999999999999999986321 1222233334 44455559999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhHH--------HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHh
Q 016350 125 ALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (391)
Q Consensus 125 ~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 196 (391)
.++++++++++++++++. .++++|+++|++.|..++...++++|++|+++|+++.++.+.+...|..+++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998874 588999999999999999999999999999999999999988888888888776
Q ss_pred ccccc--------cccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcc
Q 016350 197 GIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLD 268 (391)
Q Consensus 197 ~~~l~--------~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (391)
+..+. +..+ ||+.|++.+++.++........||+|++.. + + +
T Consensus 180 ~~~~~~~~~~~~~~~~g-Wr~~F~i~~~~~ll~~~~~~~~~e~~~~~~------~--~---------------------~ 229 (432)
T PRK10406 180 VVVLQQTLEDAELREWG-WRIPFALGAVLAVVALWLRRQLDETSQQET------R--A---------------------L 229 (432)
T ss_pred HHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHhcCCCCchHHH------h--h---------------------h
Confidence 54433 2456 999999988877766555555677653210 0 0 0
Q ss_pred cCCCCccccchhcccccchhHHHHHHHHH-HHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 016350 269 RGDDGDIVKFEELLYGRHFRVVFIGSTLF-ALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK 347 (391)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 347 (391)
+ +..++++++++++.+...+...+. ....+....+.|.|+.+.++.+..+.+.......++..++.++.|+++||
T Consensus 230 ~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr 305 (432)
T PRK10406 230 K----EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDK 305 (432)
T ss_pred c----ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011355667777666544433332 33334444556666655444443344556666677778888899999999
Q ss_pred hCchHHHHHHHHHHHHH
Q 016350 348 LGRKALLQWSFFSMAVS 364 (391)
Q Consensus 348 ~~~~~~~~~~~~~~~~~ 364 (391)
++||+.+.++..+.++.
T Consensus 306 ~grr~~~~~~~~~~~~~ 322 (432)
T PRK10406 306 IGRRTSMLCFGSLAALF 322 (432)
T ss_pred cCchHHHHHHHHHHHHH
Confidence 99998877665544333
No 14
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.7e-31 Score=244.21 Aligned_cols=299 Identities=17% Similarity=0.210 Sum_probs=222.8
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+.+++.+..+.++.+.++++.....+..|.+.+++|+++.+. +++.+++.+++.+++++.|+++||+|||++++.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~ 91 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEG--AFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIV 91 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 444566778888888999999999999999999999998776 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch
Q 016350 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (391)
+.+++.++++++++++.++++|+++|++.+..++....++.|++|+++|+++.++...+..+|.++++.+.+.+.+..+
T Consensus 92 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~- 170 (426)
T PRK12307 92 AYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG- 170 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888888778
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccc
Q 016350 207 WRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH 286 (391)
Q Consensus 207 w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (391)
||+.|++..+..++........||++++...+.+. ..+ +.+.........++++++++.
T Consensus 171 w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~------------~~~---------~~~~~~~~~~~~~~~~~~~~~ 229 (426)
T PRK12307 171 WRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSG------------KGK---------HSQSAWSVFSLSMKGLFNRAQ 229 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhc------------ccc---------ccccchhhhhHHHHHHHhhch
Confidence 99999886544433332223345553321110000 000 000000111224566777777
Q ss_pred hhHHHHHHHHHHHH---hhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 016350 287 FRVVFIGSTLFALQ---QLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (391)
Q Consensus 287 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (391)
++............ .+....+.+.|..+ .+.+....+.......++.+++.++.+++.||++||+....+.++..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~ 308 (426)
T PRK12307 230 FPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFL 308 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 76544333222221 11223345555543 233333456677778889999999999999999999988888777666
Q ss_pred HHHHHHH
Q 016350 364 SMAIQVA 370 (391)
Q Consensus 364 ~~~~~~~ 370 (391)
..+.+..
T Consensus 309 ~~~~~~~ 315 (426)
T PRK12307 309 FIFPLFR 315 (426)
T ss_pred HHHHHHH
Confidence 6554443
No 15
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=8.3e-32 Score=251.89 Aligned_cols=312 Identities=20% Similarity=0.230 Sum_probs=244.0
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
.+..++++.+...++....++.+|.+.+++|.+.++. +++.+.+.++..++.++.|+++||+|||++++.+.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQV--QWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh--hHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4567777888899999999999999999999987777 89999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHH
Q 016350 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (391)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 211 (391)
.+++++++|++.++++|+++|++.+...+....++.|++|+++|+++.+++..+..+|..++|.+++.+.+..+ ||+.|
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-w~~~f 159 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYH-WRWIF 159 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcC-ceehh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888 99999
Q ss_pred HHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHH--------HH--HHhCCCCc---h-hHHH----------Hhhh
Q 016350 212 WVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAE--------FE--KLLGGSHV---K-SSLA----------ELSK 266 (391)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~--------~~--~~~~~~~~---~-~~~~----------~~~~ 266 (391)
++.+...++..+.. ++.||+++.. +++.+..... .. ...+.... . .... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVV 237 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 99877766655444 4456643211 1111110000 00 00010000 0 0000 0000
Q ss_pred cccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 016350 267 LDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD 346 (391)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 346 (391)
.+.. ..++....+++++|+++...+..++..+..+....+.|.|+++.++.+..+.+....+..++..++.++.|++.|
T Consensus 238 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~ 316 (485)
T TIGR00711 238 WELT-DDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGD 316 (485)
T ss_pred HHHc-CCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0111 111222346788888888877777777777777778888888877777777888888899999999999999999
Q ss_pred hhCchHHHHHHHHHHHHHHHHHH
Q 016350 347 KLGRKALLQWSFFSMAVSMAIQV 369 (391)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ 369 (391)
|++||+.+.++..+.+++..++.
T Consensus 317 r~~~~~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 317 KIDPRKLVTIGLILYAVGFYWRA 339 (485)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999888888888877766
No 16
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=6.5e-31 Score=240.20 Aligned_cols=306 Identities=20% Similarity=0.223 Sum_probs=222.8
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+++|+.+..++++.+.+.++....++..|.+.+++|++.++. +++.+++.++..+++++.|+++||+|||++++.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDA--ASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 456778888999999999999999999999999999988877 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc-
Q 016350 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG- 205 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~- 205 (391)
+.++++++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++.+++.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~ 165 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGD 165 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999888776543
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccccc
Q 016350 206 WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR 285 (391)
Q Consensus 206 ~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
.||+.|++.++..++..+.....||++++...++++++..+..++..+..... +...++.....++..+.+
T Consensus 166 ~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 236 (405)
T TIGR00891 166 GWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRI---------ANIVMTLAAAMVQSAGKR 236 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhh---------hhhhhhhhHHhhhhhhhh
Confidence 39999998777666666666667887654322222111111111111100000 000000000011100001
Q ss_pred c--hhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 016350 286 H--FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (391)
Q Consensus 286 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (391)
. +...................+.+.|..+.++.+..+.+.......++..++.++.+++.||++||+.+.++.....+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~ 316 (405)
T TIGR00891 237 WPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQL 316 (405)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHH
Confidence 0 11111222222222223334556666555555555567778888999999999999999999999988877665533
No 17
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.4e-32 Score=254.82 Aligned_cols=303 Identities=16% Similarity=0.076 Sum_probs=225.7
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+..+..+.++.++++....++..+++..|.+.+|+|++.++. |++.+++.+++++++++.|+++||+|||+++..+.+
T Consensus 25 ~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~ 102 (467)
T PRK09556 25 KPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTEL--GMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLI 102 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHH
Confidence 335566777788888889999999999999999999988777 999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHh-----hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc
Q 016350 127 PMIIGASISAT-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 127 ~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (391)
+++++.+..++ ++|++.+++.|+++|++.+...+...++++||+|+++||+++|+...+..+|..+++++...+.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 103 LSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 88887776655 5899999999999999999999999999999999999999999999999999999998876655
Q ss_pred ccc--chhHHHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCcccc-
Q 016350 202 EIA--GWWRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVK- 277 (391)
Q Consensus 202 ~~~--~~w~~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 277 (391)
... ++||..|.+.+++.++..+.. ++.+++|+..... +.++ ..+ .. ... +....+.++......
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~-~~~~---~~~---~~--~~~---~~~~~~~~~~~~~~~~ 250 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWG-KAEE---IFG---EP--ISE---EDKETESTDMTKWQIF 250 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCC-Chhh---ccc---Cc--cch---hhhccccccCcHHHHH
Confidence 432 238999888777766654444 4456665321100 0110 000 00 000 000000000000011
Q ss_pred chhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHH
Q 016350 278 FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWS 357 (391)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 357 (391)
.+..++++.+|...+..++..........+.|.|+.+.++.+..+++.......++..++.+++|+++||++||+.....
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~ 330 (467)
T PRK09556 251 VEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVAC 330 (467)
T ss_pred HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHH
Confidence 12367888888888777777766666667888888777776666677788888899999999999999999998876655
Q ss_pred HHHHHH
Q 016350 358 FFSMAV 363 (391)
Q Consensus 358 ~~~~~~ 363 (391)
.....+
T Consensus 331 ~~~~~~ 336 (467)
T PRK09556 331 IALALI 336 (467)
T ss_pred HHHHHH
Confidence 444433
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=9.3e-31 Score=239.09 Aligned_cols=292 Identities=20% Similarity=0.250 Sum_probs=223.4
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 125 (391)
.+++|..+.+..+..+.++++....++..|.+.+++|.++++. +++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQM--GWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 3466778888888899999999999999999999999987776 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 126 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 88 ALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988887777
Q ss_pred hhHHHHHHHHHHHHHHHH-HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccc-
Q 016350 206 WWRICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLY- 283 (391)
Q Consensus 206 ~w~~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (391)
||+.|++.++..++..+ ...++||+|++...++++++.++. .+..++
T Consensus 168 -~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~ 216 (406)
T PRK11551 168 -WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPV------------------------------LRALFGE 216 (406)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhh------------------------------HHHHhhh
Confidence 99999987765555443 445678876543222111110000 000111
Q ss_pred --ccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHH
Q 016350 284 --GRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (391)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 361 (391)
.+..+......++.....+....+.|.|..+ .+.+....+.......++..++.++.|++.||++||+.+..+....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 295 (406)
T PRK11551 217 GRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGI 295 (406)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 1122222222333333333333445555543 3444455677888888999999999999999999999888776666
Q ss_pred HHHHHHHHHH
Q 016350 362 AVSMAIQVAA 371 (391)
Q Consensus 362 ~~~~~~~~~~ 371 (391)
.++++.+...
T Consensus 296 ~~~~~~~~~~ 305 (406)
T PRK11551 296 LASLAALAAA 305 (406)
T ss_pred HHHHHHHHhc
Confidence 6665555443
No 19
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=4.6e-31 Score=247.75 Aligned_cols=293 Identities=22% Similarity=0.315 Sum_probs=228.8
Q ss_pred chHHHhHhhhccC---cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHH
Q 016350 72 EPLESISLDLGFN---GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (391)
Q Consensus 72 ~~~~~i~~~~~~~---~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r 148 (391)
+..|.+.+|+|++ ..+. +++.+++.++..+++++.|+++||+|||++++.+.++.+++++++++++|++.++++|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~--~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKV--DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHH--HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 5678999999997 4444 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhcc
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~ 228 (391)
++.|++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+..+++
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999998876643 9999999888888877777889
Q ss_pred ccchhHHHHcCCHHHHHHHHHHHhCCCCch--hHHHHhh-hcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhch
Q 016350 229 AESPHWLYKKGRTAEAEAEFEKLLGGSHVK--SSLAELS-KLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGI 305 (391)
Q Consensus 229 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (391)
||+|+|+..+++.+++.+.+++..+.+... .+..+.. +.+..++.+..+.++++++|.++...+...+..+.....+
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998888877766654332211 1111110 0111111123467788888888776665554444333323
Q ss_pred hhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhcc
Q 016350 306 NAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS 374 (391)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (391)
+..+.+.+. .+.+........++..+++.++.+++.||+|||+.+.++.++.+++++++.+.+..
T Consensus 344 ~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~ 408 (505)
T TIGR00898 344 YGLVLDLGN----LGGNIYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVD 408 (505)
T ss_pred HHHhccccc----cCCChHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 333333322 22334455666778889999999999999999999999988888888777765543
No 20
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=2.2e-30 Score=234.65 Aligned_cols=271 Identities=16% Similarity=0.128 Sum_probs=207.7
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
.|+.+..+.++.+..........+.+|++.+++|.++++. ++..+++.++..+++++.|+++||+|||++++.+.++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~ 95 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVA--GQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLL 95 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHH
Confidence 4555555555555555555566678899999999998877 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
+++.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|+++.++...+.++|..++|.+++.+.+..+ ||
T Consensus 96 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~ 174 (394)
T PRK10213 96 TLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG-WR 174 (394)
T ss_pred HHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-HH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888 99
Q ss_pred HHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccch
Q 016350 209 ICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (391)
Q Consensus 209 ~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
+.|++.++..++..+.. ...||+|+ + ++ + ...+.++.+++|.+
T Consensus 175 ~~f~~~~~l~~~~~l~~~~~~p~~~~----~-~~-~------------------------------~~~~~~~~l~~~~~ 218 (394)
T PRK10213 175 NVFNAAAVMGVLCIFWIIKSLPSLPG----E-PS-H------------------------------QKQNTFRLLQRPGV 218 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCc----c-cc-c------------------------------chhHHHHHhcCHHH
Confidence 99998776666544433 33565431 0 00 0 00112345667777
Q ss_pred hHHHHHHHHHHHHhhhchhhH-HHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHH
Q 016350 288 RVVFIGSTLFALQQLSGINAI-FYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 360 (391)
+...+..++.....+....+. |.|. +.++.+....+......+++..++.++.+++.||.+++ .+..+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~l~~~~~~ 290 (394)
T PRK10213 219 MAGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-ALAGAPLV 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHH
Confidence 766555444444444333444 3343 33455555567788888899999999999999995444 43333333
No 21
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.9e-31 Score=243.73 Aligned_cols=283 Identities=16% Similarity=0.111 Sum_probs=215.2
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
++.......++.+...++...++..+|.+.+++|++.++. |++.+.+.+++.+++++.|+++||+|||+++.++.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~ 98 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDI--GLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIAT 98 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHH
Confidence 3455556667777778888888899999999999987776 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
+++.++++++++++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ ||
T Consensus 99 ~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g-w~ 177 (434)
T PRK11663 99 GIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYG-WR 177 (434)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-HH
Confidence 99999999999999999999999999999889999999999999999999999999999999999999999888888 99
Q ss_pred HHHHHHHHHHHHHH-HHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCcccc-c-hhccccc
Q 016350 209 ICFWVSIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVK-F-EELLYGR 285 (391)
Q Consensus 209 ~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 285 (391)
+.|++.+++.++.. +..++++|+|++...+...++..+.. + ..+..+++..+..+ + ...++++
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~ 243 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDAL-E-------------LAQQQEGAGLSRKEILTKYVLLNP 243 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccccccc-c-------------cchhccccCCChhhhHHHHHhcCh
Confidence 99998877666543 34456777764321010000000000 0 00000000000111 1 1245667
Q ss_pred chhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 016350 286 HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL 348 (391)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (391)
.++...+..++..........+.|.|+.+.++.+....+.......+++.+++++.|++.||+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~ 306 (434)
T PRK11663 244 YIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKL 306 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 777766665555555555556677777655566666677788888999999999999999998
No 22
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.98 E-value=2e-30 Score=235.07 Aligned_cols=280 Identities=13% Similarity=0.065 Sum_probs=216.0
Q ss_pred hHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHH
Q 016350 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (391)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 129 (391)
|.....++.+.+..... ...++.+|.+++|+|++.++. +++.+.+.+++.+++++.|+++||+|||+++..+..+++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 9 FMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVA--ALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred HHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 43444444444443333 567899999999999998877 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHH
Q 016350 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (391)
Q Consensus 130 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 209 (391)
++.+++++++|++.++++|+++|++.+...+....++.|++| ++|+++++.+..+...|..+++.+++.+.++..+||+
T Consensus 86 ~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~ 164 (393)
T PRK09705 86 VGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQ 164 (393)
T ss_pred HHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 999999999999999999999999999999999999999997 7899999999999999999999999888877523999
Q ss_pred HHHHHHHHHHHHHHHhhcccc-chhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchh
Q 016350 210 CFWVSIVPAAILCLAMVFCAE-SPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (391)
Q Consensus 210 ~f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (391)
.+.+.++..++..+..+...+ .|+ .++ ++ +.+.++.+++++.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-------------------------~~----~~~~~~~l~~~~~~ 208 (393)
T PRK09705 165 TLAWWALPAVVALFAWWWQSAREVA-------SSH-------------------------KT----TTTPVRVVFTPRAW 208 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc-------ccc-------------------------CC----CcCCcccccCHhHH
Confidence 887765554443333322211 110 000 00 01123345566666
Q ss_pred HHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 016350 289 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (391)
...+...+..........+.+.|+.+ ++.+..+.+....+..++.++++++.+++.||++||+...++..+..++..++
T Consensus 209 ~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~ 287 (393)
T PRK09705 209 TLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGF 287 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 66655555555555666677777765 56666667888889999999999999999999999998888877777776655
Q ss_pred HH
Q 016350 369 VA 370 (391)
Q Consensus 369 ~~ 370 (391)
..
T Consensus 288 ~~ 289 (393)
T PRK09705 288 IW 289 (393)
T ss_pred HH
Confidence 43
No 23
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.98 E-value=9.2e-31 Score=236.70 Aligned_cols=281 Identities=13% Similarity=0.154 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
.+..+.+..+..........+.+|.+.+|+|.+.++. |++.+.+.+++.++++++|+++||+|||+++..+..+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAA--GHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHH--hHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 3456666778888888888999999999999988777 89999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHH
Q 016350 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (391)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 211 (391)
.+++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+..+ ||+.|
T Consensus 82 ~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-wr~~f 160 (382)
T PRK10091 82 NAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS-WRYTF 160 (382)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc-HHHHH
Confidence 99999999999999999999999999888888899999999999999999999999999999999999888778 99999
Q ss_pred HHHHHHHHHHHHH-hhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHH
Q 016350 212 WVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (391)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (391)
++.++..++..+. .+++||.++ +.+. +.++ ..+.++++..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~lp~~~~----~~~~-~~~~-------------------------------~~~~~~~~~~~~~ 204 (382)
T PRK10091 161 LLIAVFNIAVLASIYFWVPDIRD----EAKG-GLRE-------------------------------QFHFLRSPAPWLI 204 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCc----cccc-CHHH-------------------------------HHHHhcChHHHHH
Confidence 9987776655443 345676531 1000 0000 0112344555544
Q ss_pred HHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 016350 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 370 (391)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (391)
.....+.....+....+++.|..+.++.+....+.......++..+++++.+++.||+++|+.+..+..+..++.+++..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~ 284 (382)
T PRK10091 205 FAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFF 284 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHH
Confidence 43333332222222334444554444555555677888889999999999999999999999988888877777765544
Q ss_pred H
Q 016350 371 A 371 (391)
Q Consensus 371 ~ 371 (391)
.
T Consensus 285 ~ 285 (382)
T PRK10091 285 F 285 (382)
T ss_pred H
Confidence 3
No 24
>PRK09952 shikimate transporter; Provisional
Probab=99.98 E-value=8e-30 Score=234.21 Aligned_cols=292 Identities=18% Similarity=0.101 Sum_probs=203.1
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHH-hHhhh--ccCcchhHHHHHH-----HHHHHHHHHHHHHHHHhhhcchh
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLES-ISLDL--GFNGNTLAEGLVV-----SMCLGGAFIGSTLSGWIADGVGR 117 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~--~~~~~~~~~~~~~-----s~~~~~~~i~~~~~g~l~dr~Gr 117 (391)
..++++.+....++.+.+.++...++...|. +.+++ +.++.. +++. ++..++..+++++.|+++||+||
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Gr 93 (438)
T PRK09952 17 LSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAM---GTLAAFATFGVGFLFRPLGGVVFGHFGDRLGR 93 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHH---HHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcc
Confidence 3444566777788899999999998888774 55555 555442 4543 34456678999999999999999
Q ss_pred hHHHHHhhHHHHHHHHHHHhhhhHH--------HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHH
Q 016350 118 RRAFQLCALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG 189 (391)
Q Consensus 118 r~~l~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 189 (391)
|++++.+.++++++++++++++|+. .++++|+++|++.|..++....++.|++|+++|++..+....+..+|
T Consensus 94 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G 173 (438)
T PRK09952 94 KRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999987 58889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcccccc--------ccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHH
Q 016350 190 LMGSLLIGIPVKE--------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSL 261 (391)
Q Consensus 190 ~~~~~~~~~~l~~--------~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (391)
.+++..+...+.. ..+ ||+.|++.+++.++........||+|++...+++.++.
T Consensus 174 ~~l~~~~~~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~----------------- 235 (438)
T PRK09952 174 LLLSTGLVSLISMMTTDEQFLSWG-WRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQAAA----------------- 235 (438)
T ss_pred HHHHHHHHHHHHHhCCHHHhhccC-hHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcccc-----------------
Confidence 9888776654432 346 99999998877655544445577876543221110000
Q ss_pred HHhhhcccCCCCccccchhcccccchhHHHH-HHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHH
Q 016350 262 AELSKLDRGDDGDIVKFEELLYGRHFRVVFI-GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVV 340 (391)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (391)
+.+....+.++++++.+.... ..++.....+....+.+.|..+.++.+...........++...++.++
T Consensus 236 ----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~ 305 (438)
T PRK09952 236 ----------KKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPC 305 (438)
T ss_pred ----------cccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000001122444555444332 223333333444455666665544433222223444556777888899
Q ss_pred HHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 016350 341 AMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 341 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (391)
.|+++||++||+.+..+.++..++.+.+
T Consensus 306 ~g~l~Dr~grr~~~~~~~~~~~~~~~~~ 333 (438)
T PRK09952 306 FAWLADRFGRRRVYITGALIGTLSAFPF 333 (438)
T ss_pred HHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 9999999999998887766655544333
No 25
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.97 E-value=4.7e-30 Score=232.95 Aligned_cols=286 Identities=17% Similarity=0.165 Sum_probs=225.2
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
.+..+....+....+.....+.+|.+.+++|.++++. +++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 6 FALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIV--QMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 3344444456667778888899999999999988777 99999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHH
Q 016350 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (391)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 211 (391)
.+.++++++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+.+..+ ||+.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~~~ 162 (385)
T TIGR00710 84 SLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLS-WHAIF 162 (385)
T ss_pred HHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888778 99999
Q ss_pred HHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHH
Q 016350 212 WVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (391)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (391)
++.++..++..+.. ++.||+++. +++++..+ .....++++++|+++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~ 211 (385)
T TIGR00710 163 AFLSLAGILLSALIFFILPETLPY----EARIQIST---------------------------YFETFLLLLKSKMFWGY 211 (385)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCC----cccCCHHH---------------------------HHHHHHHHHcCchhHHH
Confidence 98777666654444 446665321 10000000 01123455667777766
Q ss_pred HHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 016350 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 370 (391)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (391)
.+...+............+.+..+.++.++...+.......++.+++.++.+++.||+++|+.+..+..+..++..++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (385)
T TIGR00710 212 ALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEI 291 (385)
T ss_pred HHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 55554444444444445566666556666666777888888999999999999999999999888887777776666554
Q ss_pred H
Q 016350 371 A 371 (391)
Q Consensus 371 ~ 371 (391)
.
T Consensus 292 ~ 292 (385)
T TIGR00710 292 T 292 (385)
T ss_pred H
Confidence 4
No 26
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=6.9e-30 Score=229.49 Aligned_cols=278 Identities=12% Similarity=0.045 Sum_probs=214.4
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 127 (391)
.++.+.+..++.++......+.+++.+.+.+ ++|++.+|. +++.+++.++++++.++.|++.||+|.|+++.++.++
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~--g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll 109 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQL--FLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAI 109 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 4567777778888888889999999998877 899998877 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhh-----hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc-
Q 016350 128 MIIGASISATT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK- 201 (391)
Q Consensus 128 ~~i~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~- 201 (391)
+++.++..+++ ++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++.+.+.
T Consensus 110 ~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~ 188 (462)
T PRK15034 110 LIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999987 8999999999999997 7788899999999999999999999997666666665555443322
Q ss_pred ----c-------------ccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHh
Q 016350 202 ----E-------------IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAEL 264 (391)
Q Consensus 202 ----~-------------~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (391)
. ..+ ||..+++..++.++..+..++..++++ +.
T Consensus 189 ~~l~~~~G~~~~~~~~g~~~~-~~~~~~~~~~~~iv~~i~~~~~~~~~~----~~------------------------- 238 (462)
T PRK15034 189 VPVFAFLGVNGVPQADGSVMS-LANAAWIWVPLLAIATIAAWSGMNDIA----SS------------------------- 238 (462)
T ss_pred HHHHHHhccccccccccchHH-HHHHHHHHHHHHHHHHHHHHHhCCCcc----cc-------------------------
Confidence 1 222 888888877777666555544433311 00
Q ss_pred hhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHH
Q 016350 265 SKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVL 344 (391)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 344 (391)
+....+..+.+|+|+.|...+.+++.+..+.+..+++|+|..+.+. ............+...+.++++|++
T Consensus 239 -------~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~L 309 (462)
T PRK15034 239 -------RASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAI 309 (462)
T ss_pred -------ccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 0011224457788999998888888777776666678888766442 1222223444567788899999999
Q ss_pred HhhhCchHHHHHHHHHHHHHHHHH
Q 016350 345 MDKLGRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 345 ~d~~~~~~~~~~~~~~~~~~~~~~ 368 (391)
+||+|+++++.++++.+.++....
T Consensus 310 ADRiG~~~vl~~~~i~~~i~~~~~ 333 (462)
T PRK15034 310 SDKFGGVRVTLINFIFMAIFSALL 333 (462)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHH
Confidence 999999999998888777766443
No 27
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=3.8e-30 Score=229.72 Aligned_cols=249 Identities=13% Similarity=0.012 Sum_probs=186.0
Q ss_pred hhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHH
Q 016350 63 FGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI 142 (391)
Q Consensus 63 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~ 142 (391)
+......+++.+|.+.+|+|++.++. |++.+.+.+++.+++++.|+++||+|||+++..+......+.+....++|+.
T Consensus 3 ~~~~~~~~~~~lp~i~~~~~~s~~~~--g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDIDVSKEEL--GLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYE 80 (368)
T ss_pred hhHHHHHHHhhHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHH
Confidence 34455667899999999999988777 8999999999999999999999999999987766555545443333347999
Q ss_pred HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHH
Q 016350 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (391)
Q Consensus 143 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~ 222 (391)
+++++|+++|++.+.. ......++|++|+++|++++++.+.+..+|..+++++++.+.+..+ ||+.|++.+++.++..
T Consensus 81 ~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~ 158 (368)
T TIGR00903 81 WLLACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGI 158 (368)
T ss_pred HHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHH
Confidence 9999999999999864 5556667999999999999999999999999999999999988888 9999999777666654
Q ss_pred H-HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHh
Q 016350 223 L-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQ 301 (391)
Q Consensus 223 ~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (391)
+ ..+++||+|++.. +..+..+ ...++++++++|.+|...+..++.....
T Consensus 159 ~~~~~~lp~~p~~~~---~~~~~~~---------------------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 208 (368)
T TIGR00903 159 ILVLAALPALPFQAA---EGFGFKD---------------------------AVKEFGALAGRKDLWIIGAILGFGVALF 208 (368)
T ss_pred HHHHHHcCCCCCCCC---CCcchHH---------------------------HHHHHHHHHcChhHHHHHHHHHHHHHHH
Confidence 4 4567888875321 0000000 0012567888899999888888888888
Q ss_pred hhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCc
Q 016350 302 LSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGR 350 (391)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 350 (391)
+...+|+|.|+.+ .+.+ ...+.......+.+. +..++++||..|
T Consensus 209 ~~~~~wlp~~L~~-~g~s-~~~~~~~~l~~~~g~---~g~~~~~d~~~r 252 (368)
T TIGR00903 209 DNLAIWLEAALRP-AGLE-DIAGDAVALAILAGL---IGVAVIPDRVAR 252 (368)
T ss_pred HHHHHHHHHHHHH-CCCC-hHHHHHHHHHHHHHH---HHHHHhhHHhhh
Confidence 7777788888854 3322 223444444444444 445778887654
No 28
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.97 E-value=8.9e-30 Score=232.45 Aligned_cols=293 Identities=17% Similarity=0.144 Sum_probs=227.8
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
++.+.....+.+..+...+....+.+.+|.+.+++|.+.++. ++..+.+.+++.+++++.|+++||+|||+++..+..
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~ 86 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWV--PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVA 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 444555666677777778888888899999999999987776 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch
Q 016350 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (391)
..+++.+.+.++++++.+++.|+++|++.+...+....++.|++|+++|.++.++......+|..++|.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~- 165 (406)
T PRK15402 87 FFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP- 165 (406)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-
Confidence 9999999999999999999999999999999888889999999999999999999988888999999999998888777
Q ss_pred hHHHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccccc
Q 016350 207 WRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR 285 (391)
Q Consensus 207 w~~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
||+.|++.++..++..+.. +..||+++.. +++.+ .+ +...++++++++|
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~--------------------------~~~~~~~~~~~~~ 215 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRV---GEKLS-LK--------------------------ELGRDYKLVLKNR 215 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCccc---ccccc-HH--------------------------HHHHHHHHHHcCc
Confidence 9999998777766655543 4466653210 00000 00 0011234567778
Q ss_pred chhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 016350 286 HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSM 365 (391)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (391)
.++...+...+............+.|..+.++.+..+.+.......++..++.++.+++.||+++|+.+.++.....++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~ 295 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGL 295 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 87776665554444433333445666655555555555666666777888999999999999999999888888777777
Q ss_pred HHHHHHh
Q 016350 366 AIQVAAS 372 (391)
Q Consensus 366 ~~~~~~~ 372 (391)
+++....
T Consensus 296 ~~~~~~~ 302 (406)
T PRK15402 296 LLAALAT 302 (406)
T ss_pred HHHHHHH
Confidence 7766543
No 29
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=2.1e-29 Score=231.57 Aligned_cols=280 Identities=20% Similarity=0.249 Sum_probs=193.3
Q ss_pred hHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHH-----HHHHHHHHHHHHHhhhcchhhHHHHHh
Q 016350 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMC-----LGGAFIGSTLSGWIADGVGRRRAFQLC 124 (391)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~-----~~~~~i~~~~~g~l~dr~Grr~~l~~~ 124 (391)
++....++++.+++.++...++...|.+.+|++.++.+.. ++..+.. .++..+++++.|+++||+|||++++.+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFA-SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchH-HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4467788889999999999999999999999998876642 2333322 222347899999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhHH--------HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHh
Q 016350 125 ALPMIIGASISATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (391)
Q Consensus 125 ~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 196 (391)
.+++++++++++++++++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987 468899999999999999889999999999999999999998888887777777
Q ss_pred ccccc--------cccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcc
Q 016350 197 GIPVK--------EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLD 268 (391)
Q Consensus 197 ~~~l~--------~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (391)
++.+. +..+ ||+.|++..+...+........||++++...+.
T Consensus 173 g~~l~~~~~~~~~~~~g-Wr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~----------------------------- 222 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWG-WRIPFLIGCLIVPFIFLIRRSLEETEEFLARKH----------------------------- 222 (434)
T ss_pred HHHHHHhCCHHHHhccc-hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhh-----------------------------
Confidence 66542 3456 999998755433222222222333221100000
Q ss_pred cCCCCccccchhcccccchhHH-HHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 016350 269 RGDDGDIVKFEELLYGRHFRVV-FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK 347 (391)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 347 (391)
+ .+....+++..+++..+.. ....++.....+....+.|.|+.+.++.+..+.+.......++++++.++.|+++||
T Consensus 223 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr 300 (434)
T PRK15075 223 R--PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDR 300 (434)
T ss_pred c--cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000011122222222222 111222222233334456666665555554456667777888899999999999999
Q ss_pred hCchHHHHHHHHHHH
Q 016350 348 LGRKALLQWSFFSMA 362 (391)
Q Consensus 348 ~~~~~~~~~~~~~~~ 362 (391)
++||+....+.....
T Consensus 301 ~g~r~~~~~~~~~~~ 315 (434)
T PRK15075 301 IGRRPVLIAFTVLAI 315 (434)
T ss_pred hcchHHHHHHHHHHH
Confidence 999998777654443
No 30
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=1.4e-29 Score=229.85 Aligned_cols=285 Identities=16% Similarity=0.138 Sum_probs=220.6
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
+++....++++.+..+......++.+|++.+++|++.++. +++.+.+.+++.+++++.|++.||+|||+++..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~--g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~ 82 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSM--SNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALM 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3456667777888888888889999999999999988777 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc-ccchh
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-IAGWW 207 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~w 207 (391)
+++.++++++++++.+++.|+++|++.+...+....++.|++|+++|+++++..+....+|..++|.+.+.+.. ..+ |
T Consensus 83 ~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~g-w 161 (394)
T PRK03699 83 ILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIE-W 161 (394)
T ss_pred HHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-H
Confidence 99999999999999999999999999999888888999999999999999999988889998899988877654 456 9
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccch
Q 016350 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
|+.|.+.+++.++..+..++ .+.|+. ++++++ ++. +. .++. .++.+
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~-~~~p~~---~~~~~~------------------------~~~-~~----~~~~-~~~~~ 207 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLF-SEFPAL---GKHAPK------------------------ADK-PV----AKEK-WGIGV 207 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCccc---cccCcc------------------------ccC-cc----cccc-CChHH
Confidence 99999877766655444332 222210 000000 000 00 0011 12445
Q ss_pred hHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 016350 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 367 (391)
+...+..++.....+....+.|.|+.+.++.+..+.+.......++..+++++.++++||+++|+.+.....+..+.+.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~ 287 (394)
T PRK03699 208 LFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYL 287 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Confidence 55555555555555555677888887766766667788888888999999999999999999999888777666665555
Q ss_pred HHH
Q 016350 368 QVA 370 (391)
Q Consensus 368 ~~~ 370 (391)
+..
T Consensus 288 ~~~ 290 (394)
T PRK03699 288 FVN 290 (394)
T ss_pred HHH
Confidence 443
No 31
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=5.1e-30 Score=238.02 Aligned_cols=288 Identities=14% Similarity=0.096 Sum_probs=227.7
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHh----------------------hhccCcchhHHHHHHHHHHHHHHH
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISL----------------------DLGFNGNTLAEGLVVSMCLGGAFI 103 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----------------------~~~~~~~~~~~~~~~s~~~~~~~i 103 (391)
.+.++....++.++....+.++...+...+.+.+ |++++..+. |++.+.+.+++.+
T Consensus 14 ~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~ 91 (465)
T TIGR00894 14 CSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQ--GLILSSHFYGQII 91 (465)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHh--hHHHHHHHHHHHH
Confidence 4455667777788888888899888888887776 777776665 9999999999999
Q ss_pred HHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh--hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHH
Q 016350 104 GSTLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAF 181 (391)
Q Consensus 104 ~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~ 181 (391)
++++.|+++||+|||+++..+.++++++++++.++ .++..+++.|+++|++.+...+....++.|++|+++|++++++
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM 171 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999999999999999999998887554 5688899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccc-chhHHHHHHHHHHHHHHHHHhhc-cccchhHHHHcCCHHHHHHHHHHHhCCCCchh
Q 016350 182 IQIATCLGLMGSLLIGIPVKEIA-GWWRICFWVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKS 259 (391)
Q Consensus 182 ~~~~~~~g~~~~~~~~~~l~~~~-~~w~~~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (391)
...+..+|..+++++++.+.+.. + ||+.|++.++..++..+.+++ .+|+|+... ...++.++..++.
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~i~~~-------- 240 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCESWGG-WPMIFYVFGIVGCAWSLLWFVFPADDPSIHP--CISKFEKKYINSS-------- 240 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCC-CCeehhhhhHHHHHHHHHHHHHhcCCcccCC--CCCHHHHHHHHhh--------
Confidence 99999999999999999988874 7 999999988887777665544 555554211 1111111111110
Q ss_pred HHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHH
Q 016350 260 SLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSV 339 (391)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (391)
.+.++.+......++++++++.++...+..++.....+....++|.|+.+.++.+....+.......++..++.+
T Consensus 241 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~ 315 (465)
T TIGR00894 241 -----LQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSI 315 (465)
T ss_pred -----cccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHH
Confidence 000111112234578889999999888888887777777677888888877777777788888888999999999
Q ss_pred HHHHHHhhhCch
Q 016350 340 VAMVLMDKLGRK 351 (391)
Q Consensus 340 ~~g~l~d~~~~~ 351 (391)
++|+++||+++|
T Consensus 316 ~~g~l~d~~~~~ 327 (465)
T TIGR00894 316 FAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHHHc
Confidence 999999997543
No 32
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=1.7e-29 Score=230.14 Aligned_cols=267 Identities=16% Similarity=0.142 Sum_probs=210.1
Q ss_pred HHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHH
Q 016350 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (391)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 133 (391)
..+.+..+...+......|.+|.+.+++|.+.++. ++..+++.++++++++++|+++||+|||++++.+.++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 96 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRDFNADVSLA--PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACA 96 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHH
Confidence 33455566677888899999999999999988777 7999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH
Q 016350 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (391)
Q Consensus 134 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~ 213 (391)
++++++|++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+ ||+.|++
T Consensus 97 ~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g-w~~~f~~ 175 (413)
T PRK15403 97 ATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVH-WKVLFAI 175 (413)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-HHHHHHH
Confidence 999999999999999999999887777778889999999999999999999999999999999999888777 9999999
Q ss_pred HHHHHHHHHHH-hhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHH
Q 016350 214 SIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (391)
Q Consensus 214 ~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
.++..++..+. .+++||+++. ++++.+.. ....++++++++|.++...+
T Consensus 176 ~~~~~~i~~~~~~~~lp~~~~~---~~~~~~~~---------------------------~~~~~~~~ll~~~~~~~~~l 225 (413)
T PRK15403 176 IAVMGLIAFVGLLLAMPETVKR---GAVPFSAK---------------------------SVLRDFRNVFRNRLFLTGAA 225 (413)
T ss_pred HHHHHHHHHHHHHHhCCCCccc---cCCCCChH---------------------------HHHHHHHHHHcCHHHHHHHH
Confidence 88777766554 4557876421 10000000 00123456778888887777
Q ss_pred HHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHH
Q 016350 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKAL 353 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 353 (391)
...+.....+......|.++.+.++.+..+.++.......+..++..+.+.+.++..+++.
T Consensus 226 ~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~ 286 (413)
T PRK15403 226 TLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRF 286 (413)
T ss_pred HHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhH
Confidence 6666665555555566777777666666667777777778888888888777655444333
No 33
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=9.5e-30 Score=236.80 Aligned_cols=314 Identities=18% Similarity=0.200 Sum_probs=236.6
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
.+.+++++.+...++...+++.+|.+.+++|.+..+. +++.+.+.++..++.+++|+++||+|||++++.+..+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHM--HMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 4556677788888888888999999999999987776 89999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHH
Q 016350 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (391)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 211 (391)
.++++++++++.++++|+++|++.+...+....++.|++|+++|+++.++......+|..++|.+++.+.+..+ ||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g-w~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYAS-WHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhcc-HHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888 99999
Q ss_pred HHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHH--------H-HHhCCCC---chhHHH-----------Hhhhc
Q 016350 212 WVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEF--------E-KLLGGSH---VKSSLA-----------ELSKL 267 (391)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~--------~-~~~~~~~---~~~~~~-----------~~~~~ 267 (391)
.+......+..+.. ...|+.+. .+.+.+...... . ...+... ...... .....
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTM---QTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLH 244 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc---cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 98776666555444 33444321 111111110000 0 0001000 000000 00001
Q ss_pred ccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 016350 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK 347 (391)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 347 (391)
++...+ +....++++||.++......++............++|.+...+.++...++...+..++..++.++.+++.||
T Consensus 245 ~~~~~~-~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r 323 (471)
T PRK10504 245 ARNNNR-ALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNR 323 (471)
T ss_pred HhcCCC-CccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 2223357889999887777777666655555667778777667666677888888888888888999999999
Q ss_pred hCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 348 LGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
+++|+++..+..+.+++..++.+..
T Consensus 324 ~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (471)
T PRK10504 324 FGYRRVLVATTLGLALVSLLFMLVA 348 (471)
T ss_pred cCchHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999888887877766666543
No 34
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.97 E-value=1.4e-29 Score=234.57 Aligned_cols=275 Identities=15% Similarity=0.089 Sum_probs=200.3
Q ss_pred hHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHH
Q 016350 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (391)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 129 (391)
++.+...+...+...+......+..|.+.+++|++.++. +++.+.+.+++.+++++.|+++||+|||+++..+.++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDI--GNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 445555555666666666677888999999999988776 888999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc----c---
Q 016350 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK----E--- 202 (391)
Q Consensus 130 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~----~--- 202 (391)
++.++++++++++.++++|+++|++.+... ....+++|++|+++|++++++.+....+|..+++.+.+.+. +
T Consensus 113 ~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~ 191 (476)
T PLN00028 113 PAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGA 191 (476)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999887654 45567899999999999999998777777666655544332 1
Q ss_pred --ccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchh
Q 016350 203 --IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEE 280 (391)
Q Consensus 203 --~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (391)
..+ ||+.|++.+++.++..+..++++++++ +++.++..+. .+.++......+++
T Consensus 192 ~~~~g-Wr~~f~i~g~l~l~~~l~~~~~~~~~p----~~~~~~~~~~-------------------~~~~~~~~~~~~~~ 247 (476)
T PLN00028 192 PSFTA-WRIAFFVPGLLHIIMGILVLTLGQDLP----DGNYRELKKS-------------------GTMPKDSFSKVLRY 247 (476)
T ss_pred cchhh-hHHHHHHHHHHHHHHHHHHHHHcCcCC----CCchhhHHhc-------------------CccccccHHHHHHH
Confidence 235 999999988887776665555544321 1111110000 00000001123455
Q ss_pred cccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCch
Q 016350 281 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK 351 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 351 (391)
.++++++|...+..++..........+.+.|+.+.++.+...++.......++..++++++|+++||++||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 248 GVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 66777777766655554444444455667776655565555677788888999999999999999999865
No 35
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.97 E-value=5.7e-30 Score=233.23 Aligned_cols=279 Identities=17% Similarity=0.138 Sum_probs=220.0
Q ss_pred HHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh
Q 016350 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (391)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 139 (391)
++...++...++...|.+.+++|.+.++. +++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQY--GYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhH--HHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 34556777788889999999999988777 8999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHH
Q 016350 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (391)
Q Consensus 140 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~ 219 (391)
|++.++++|+++|++.+...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+ ||+.|++.++..+
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~ 159 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFS-WQWAFIIEGVLGI 159 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC-chHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998888888 9999998877766
Q ss_pred HHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHH
Q 016350 220 ILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFA 298 (391)
Q Consensus 220 ~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (391)
+..+.. ++.||+|+... ..++++..+..+.... ..+.++.++......++.+++|.++...+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (399)
T TIGR00893 160 IWGVLWLKFIPDPPQKAK-WLTEEEKYIVVGGLLA----------EQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVN 228 (399)
T ss_pred HHHHHhhheecCCCCccc-cCCHHHHhhcchhhcc----------ccccccccCCCccchHHHhcCHHHHHHHHHHHHHH
Confidence 655544 44566543110 0011111100000000 00011112223345667788888888777777777
Q ss_pred HHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchH
Q 016350 299 LQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKA 352 (391)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 352 (391)
........+.+.|..+.++.+..+.+.......++..++.++.+++.||++||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 229 IGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred hHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 776666677777877766666666778888889999999999999999999885
No 36
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=2.7e-29 Score=229.94 Aligned_cols=291 Identities=13% Similarity=0.112 Sum_probs=217.3
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
....+..+.+..+..++......+..|.+++++|+++++. ++..+.+.+++.+++++.|++.||+|||+++..+..++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~--gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQA--GLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 4455666777778888888889999999999999988777 89999999999999999999999999999999999999
Q ss_pred HHHHHHH---HhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc-c-
Q 016350 129 IIGASIS---ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-I- 203 (391)
Q Consensus 129 ~i~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~- 203 (391)
+++++++ +++++++.++++|+++|+|.|...+....++.|+.++++|++.+++.+..+.+|..+++.+++.+.. .
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999875 5688999999999999999999999999999998877777778999999999999999988765430 0
Q ss_pred ----------------cc-------hhHHHHHHHH-HHHHHHHHH-hhccccchhHHHHcCCHHHHHHHHHHHhCCCCch
Q 016350 204 ----------------AG-------WWRICFWVSI-VPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVK 258 (391)
Q Consensus 204 ----------------~~-------~w~~~f~~~~-~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (391)
.+ .||+.|+... +..++..+. ....||.+. + ++++
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~----~-~~~~--------------- 241 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS----D-NHSD--------------- 241 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----c-cccc---------------
Confidence 11 1666665433 333222222 222444211 0 0000
Q ss_pred hHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhH-HHHHhhcCCChhHHHHHHHHHHHHH
Q 016350 259 SSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFS-SSVFKSAGLSSGLANVFVGIANLLG 337 (391)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (391)
++..+...+.++++++|.++...+..++..........+.+.|+ ++.++.++...+.......++..+|
T Consensus 242 ----------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG 311 (438)
T PRK10133 242 ----------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIG 311 (438)
T ss_pred ----------ccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 00001112345677888887766666666666555556666664 4455666666788899999999999
Q ss_pred HHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 338 SVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 338 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
+++++++.||+++|+++..+..+..+++++..+.
T Consensus 312 ~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 345 (438)
T PRK10133 312 RFTGTWLISRFAPHKVLAAYALIAMALCLISAFA 345 (438)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999888877766665554443
No 37
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=6.6e-30 Score=231.21 Aligned_cols=285 Identities=19% Similarity=0.129 Sum_probs=209.9
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+.......+..+. ....++..|.+.+++|++.++. |++.+++.+++.+++++.|+++||+|||+++..+.++.+++.
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~ 82 (377)
T TIGR00890 6 LVGTVIMCFTSGY-VYTWTLLAPPLGRYFGVGVTAV--AIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGF 82 (377)
T ss_pred eHHHHHHHHHhhH-HhhhhhHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHH
Confidence 3333333333333 4457889999999999988777 999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH
Q 016350 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (391)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~ 212 (391)
+++++++|++.++++|++.|++.+..++.....+.|++| ++|+++.++...+..+|..+++.+.+.+.+..+ ||+.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~f~ 160 (377)
T TIGR00890 83 TFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEG-VPAAFI 160 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhccc-HHHHHH
Confidence 999999999999999999999999988888888999987 579999999999999998776666666666667 999999
Q ss_pred HHHHHHHHHHHHhh-ccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHH
Q 016350 213 VSIVPAAILCLAMV-FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (391)
Q Consensus 213 ~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
+.++..++..+..+ +.+++|+. +.++++ +.+.+..+.++.++++.++...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~ 211 (377)
T TIGR00890 161 YMGIIFLLVIVLGAFLIGYPPGQ---LIKTNI--------------------------EVSVKDYTVWEMLRTPQFWVLY 211 (377)
T ss_pred HHHHHHHHHHHHHHHheecCchh---ccccCc--------------------------ccchhhhhHHHHHcCccHHHHH
Confidence 98887777655543 44443221 000000 0000111234566777777665
Q ss_pred HHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
...++............+.|..+ ++.+....+.......++..+++++.|++.||++||+.+.++.....++.+++.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T TIGR00890 212 LSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFI 290 (377)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHc
Confidence 55444443333222333333322 23333335567778889999999999999999999999888888888877766654
Q ss_pred h
Q 016350 372 S 372 (391)
Q Consensus 372 ~ 372 (391)
+
T Consensus 291 ~ 291 (377)
T TIGR00890 291 P 291 (377)
T ss_pred c
Confidence 4
No 38
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=1.8e-30 Score=232.68 Aligned_cols=289 Identities=22% Similarity=0.346 Sum_probs=221.8
Q ss_pred HHHHHHhhhhhhcccchHH-HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHH
Q 016350 57 TLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (391)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 135 (391)
+++.++..++.....+.+| .+.+++|.+.++. +++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQI--GLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCH--HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 4566777788888889999 8999999998887 899999999999999999999999999999999999999997777
Q ss_pred HhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHH
Q 016350 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (391)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~ 215 (391)
.+++|++.++++|+++|++.+...+....++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+ ||+.|++.+
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~-~~~~~~~~~ 158 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFG-WRWAFLISA 158 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCH-HCCHHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccc-ccccccccc
Confidence 7778888999999999999999999999999999999999999999999999999999999999998888 999999988
Q ss_pred HHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccc-cchhcccccchhHHHHH
Q 016350 216 VPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIV-KFEELLYGRHFRVVFIG 293 (391)
Q Consensus 216 ~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 293 (391)
+..++..++. .+++++++....+.+.++. ++.+.+.. .++.+.+++.+|.....
T Consensus 159 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (352)
T PF07690_consen 159 ILSLIAAILFILFLPEPPPPRERESPKESE------------------------SKKPKPLKPGFKSLFKNPVLWILLIA 214 (352)
T ss_dssp HHHHHHHHHHHCCC---STTTT--SSTTTT--------------------------HHHCCCH-CTHHHHHHCCHHHHHH
T ss_pred chhhhhhhhHhhhhhhcccccccccccccc------------------------cccccccccccccccccchhhhhhhh
Confidence 8888876643 4455443211111111100 00001111 25666777777645555
Q ss_pred HHHHHHHhhhchhhHHHhHHHHHhhc-CCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 294 STLFALQQLSGINAIFYFSSSVFKSA-GLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
.++..+.......+.+.|+.+.++.+ ..+.+.......+.+.++.++.+++.||+++++..........+..+.+....
T Consensus 215 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
T PF07690_consen 215 FFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLP 294 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSH
T ss_pred hhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555455555667777766677776 35566678888899999999999999999988777766666666555554433
No 39
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4e-31 Score=228.15 Aligned_cols=281 Identities=19% Similarity=0.190 Sum_probs=227.8
Q ss_pred CCcchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHH
Q 016350 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (391)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 123 (391)
.+.+..++.+.++++...++.+++..+....+.+++.+|++++.. |++.+.+.+.+.+++|++|+++|||.||+++.+
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~--Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSEL--GLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhc--cchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 455666778889999999999999999999999999999998877 999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc
Q 016350 124 CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (391)
Q Consensus 124 ~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (391)
|.++++++.++++++..||+++++|.+.|+|.+...++.+.+++|.+|..+|++++++++.+..+|..+|.+.+..+.+.
T Consensus 104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhc-cccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcc
Q 016350 204 AGWWRICFWVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (391)
Q Consensus 204 ~~~w~~~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (391)
.++|||.|+..+++.+++.++.++ .+|+++ +..++...+ .+......+...+.+.+.
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r-----ga~~~~~~~-----------------~~~~~~~ts~~kDl~~l~ 241 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPER-----GARDEVDGE-----------------NKMVKPFTSVWKDLKVLA 241 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCccc-----ccccccccC-----------------CcCCCCccchHHHHHHHH
Confidence 888999999999999888776644 555422 211111100 000111222233445556
Q ss_pred cccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCC---hhHHHHHHHHHHHHHHHHHHHHHhhh
Q 016350 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGSVVAMVLMDKL 348 (391)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (391)
+++.+....+......+.......+.|.+.+..+...+.+ ...+..+...++.+|.+++|.++||+
T Consensus 242 ~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~ 310 (493)
T KOG1330|consen 242 KIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKL 310 (493)
T ss_pred ccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHH
Confidence 6677776666666666666665567777777666655432 23466667788899999999999994
No 40
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=2.7e-29 Score=226.26 Aligned_cols=287 Identities=16% Similarity=0.124 Sum_probs=225.3
Q ss_pred HHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHH
Q 016350 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 135 (391)
+..+.++..+......+.+|.+.++++.+..+. +++.+++.++..+++++.|+++||+|||++++.+.++.+++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVL--SLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 345667777777778889999999998877666 999999999999999999999999999999999999999999988
Q ss_pred Hhhh-----hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHH
Q 016350 136 ATTR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (391)
Q Consensus 136 ~~~~-----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 210 (391)
++++ +++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|..++|.+++.+.+..+ ||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g-~~~~ 160 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLG-IKWA 160 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHH
Confidence 8888 999999999999999999999999999999999999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHHHhhcc--ccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchh
Q 016350 211 FWVSIVPAAILCLAMVFC--AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (391)
Q Consensus 211 f~~~~~~~~~~~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (391)
|++.++..++..+..+.+ ||+++ +++++..++..+ +....+++++++|.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 213 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSVRIPELAA----SEIQALSNAVLR-----------------------DTREGIKFVLKNPLLR 213 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCC----ccccccchhHHH-----------------------HHHhHHHHHHcCcHHH
Confidence 988777666554444333 22211 000000000000 0011244566778887
Q ss_pred HHHHHHHHHHHHhhhch-hhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 016350 289 VVFIGSTLFALQQLSGI-NAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (391)
Q Consensus 289 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 367 (391)
......++......... ...+.|..+.++.+..+.+.......++..++.++.+++.||.+||+.+..+..+.+++++.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 293 (365)
T TIGR00900 214 TLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILV 293 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH
Confidence 77666666555554444 56777777766766667788888889999999999999999999999888887777777766
Q ss_pred HHHHh
Q 016350 368 QVAAS 372 (391)
Q Consensus 368 ~~~~~ 372 (391)
+.+..
T Consensus 294 ~~~~~ 298 (365)
T TIGR00900 294 VGLTP 298 (365)
T ss_pred HHhhc
Confidence 66554
No 41
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=8e-30 Score=229.81 Aligned_cols=294 Identities=17% Similarity=0.163 Sum_probs=216.6
Q ss_pred HHHHHHHHHhhhhhhcccchHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 54 LVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
...+++.+..........+..|. +.+++|+++++. +++.+++.+++.+++++.|+++||+|||++++.+.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQL--GNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHh--hHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 34666667777778888999995 999999988877 899999999999999999999999999999999999999999
Q ss_pred HHHHhhh-hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc---------
Q 016350 133 SISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE--------- 202 (391)
Q Consensus 133 ~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--------- 202 (391)
+++++++ +++.+++.|+++|++.+. .+....+++|++|+++|+++.++......+|..+++.+++.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999 999999999999998654 45678899999999999999999997777777777777655443
Q ss_pred -ccchhHHHHH-HHHHHHHH-HHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccch
Q 016350 203 -IAGWWRICFW-VSIVPAAI-LCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFE 279 (391)
Q Consensus 203 -~~~~w~~~f~-~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (391)
..+ ||+.|+ ..++...+ ..+...+.+|+|+. +++++ +...+ +.. ...++.......
T Consensus 161 ~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~---~~~------------~~~~~~~~~~~~ 219 (366)
T TIGR00886 161 AHLA-WGWAFVIVPAGILLLPALLIFFVGADTPPG----KPATG-KLSFK---GAR------------WSVGTGALGDQL 219 (366)
T ss_pred cccc-ccchhHHHHHHHHHHHHHHHHHhcccCCcc----cccch-hcccc---ccc------------ccccchhHHHHH
Confidence 225 999984 43444333 33344556665531 11100 00000 000 000000111345
Q ss_pred hcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHH
Q 016350 280 ELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 359 (391)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (391)
+.+++|.++...+..++..........+.+.|..+.++.+..+.+.......+.+.+++++.|++.||+++|+....+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 299 (366)
T TIGR00886 220 KVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFL 299 (366)
T ss_pred HHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHH
Confidence 67777888777766666655555656677888877777666677878888888999999999999999999888777766
Q ss_pred HHHHHHHHHHHH
Q 016350 360 SMAVSMAIQVAA 371 (391)
Q Consensus 360 ~~~~~~~~~~~~ 371 (391)
....+..++.+.
T Consensus 300 ~~~~~~~~~~~~ 311 (366)
T TIGR00886 300 GVAMGAFLVVLG 311 (366)
T ss_pred HHHHHHHHHHhc
Confidence 666665555543
No 42
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=4.3e-29 Score=227.60 Aligned_cols=311 Identities=20% Similarity=0.265 Sum_probs=214.4
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+.+++.+....+..+..+++.....+..|.+.+++|.+..+. +++.+.+.++..++.++.|+++||+|||+++..+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~ 90 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQL--GFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSIL 90 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHH--HHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHH
Confidence 344556666667777778888888889999999999987776 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch
Q 016350 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (391)
+.+++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g- 169 (398)
T TIGR00895 91 LFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFG- 169 (398)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hHHHHHHHHHHHHH-HHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccccc
Q 016350 207 WRICFWVSIVPAAI-LCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR 285 (391)
Q Consensus 207 w~~~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
||+.|++.++..++ ..+...++||++++...+ ++++..+..++......... ..+..+.+.+.+......+.+++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
T TIGR00895 170 WRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK-RPETVRRIVNAIAPQMQAEA-QSALPEQKATQGTKRSVFKALFQGK 247 (398)
T ss_pred ceeehhhhhhHHHHHHHHHHHhCCCCChHHHhc-CHHHHHHHHHHHHHhccccc-cccccccccccchhhHHHHHHhcch
Confidence 99999887644444 444556688887654433 22222222222111100000 0000000000001111122233333
Q ss_pred chhH---HHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHH
Q 016350 286 HFRV---VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMA 362 (391)
Q Consensus 286 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 362 (391)
..+. .....++..........+.+ +....++.+....+.......++.+++.++.+++.||+++|.... ......
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~ 325 (398)
T TIGR00895 248 TARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTAL-LLLLGA 325 (398)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH-HHHHHH
Confidence 2222 22222222222222223333 222233444445667788888999999999999999999984443 333333
Q ss_pred HH
Q 016350 363 VS 364 (391)
Q Consensus 363 ~~ 364 (391)
+.
T Consensus 326 ~~ 327 (398)
T TIGR00895 326 VF 327 (398)
T ss_pred HH
Confidence 33
No 43
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=1.2e-28 Score=231.17 Aligned_cols=319 Identities=18% Similarity=0.233 Sum_probs=219.2
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+.+++.+..++++.+...++....++.+|.+.+++|++.++. +++.+.+.+++.+++++.|+++||+|||++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 93 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQA--ASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 345667778888899999999999999999999999988777 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch
Q 016350 127 PMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (391)
+.+++.++.++++|++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|..+++.+++.+.+..+
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~- 172 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWG- 172 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHH-H------h-hhcccCCCCcccc-
Q 016350 207 WRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLA-E------L-SKLDRGDDGDIVK- 277 (391)
Q Consensus 207 w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~-~~~~~~~~~~~~~- 277 (391)
||+.|++..+..++..+.....||++++...+++.++..+..+.....+....... . . .............
T Consensus 173 w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (496)
T PRK03893 173 WRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVA 252 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 99999886555544444445567765443222111111111111100000000000 0 0 0000000000000
Q ss_pred ------------chhcccccchhH---HHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHH
Q 016350 278 ------------FEELLYGRHFRV---VFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAM 342 (391)
Q Consensus 278 ------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 342 (391)
...-.+.++... .....+......+....++|.|+.+.++.+..+.+.......++.+++.++.|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g 332 (496)
T PRK03893 253 VLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGG 332 (496)
T ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000 00111111111111223456666544555555677888889999999999999
Q ss_pred HHHhhhCchHHHHHHHHHHHHHHHHH
Q 016350 343 VLMDKLGRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 343 ~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (391)
++.||++||+.+..+..+..+..+++
T Consensus 333 ~l~dr~g~~~~~~~~~~~~~~~~~~~ 358 (496)
T PRK03893 333 FLGDWLGTRKAYVCSLLISQLLIIPV 358 (496)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 99999999998887766655554433
No 44
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=8.8e-29 Score=224.90 Aligned_cols=286 Identities=17% Similarity=0.132 Sum_probs=217.0
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+.+.....+..........+.+|.+.+++|.+.++. ++..+.+.++..+++++.|+++||+|||++++.+.++.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQL--HIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHH
Confidence 344555566666666677789999999999987776 899999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH
Q 016350 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (391)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~ 212 (391)
+++..+++++.+++.|+++|++.+...+....++.|++|+++|+++.++.+....+|..++|.+++.+.+..+ ||+.|+
T Consensus 83 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g-~~~~~~ 161 (392)
T PRK10473 83 LLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFP-WQSLFY 161 (392)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC-hHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999988877777 999999
Q ss_pred HHHHHHHHHHHH-hhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHH
Q 016350 213 VSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (391)
Q Consensus 213 ~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
+.++..++..+. .+++||+++.. ++++.+ .....++.++++.++...
T Consensus 162 ~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~------------------------------~~~~~~~~~~~~~~~~~~ 209 (392)
T PRK10473 162 TMAAMGILVLLLSLFILKETRPAR--APAASS------------------------------KPRENSESLLNRFFLSRL 209 (392)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCcc--cCCccc------------------------------hHHHHHHHHhCHHHHHHH
Confidence 887766665444 45566653210 000000 001122345556555444
Q ss_pred HHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
+...+............+.+..+.++.+....+......+++.+++.++.+++.||++||+.+.++..+..++.+.+.+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 210 VITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333332222223334445544445444445667778888999999999999999999999988888877777766665
Q ss_pred hc
Q 016350 372 SS 373 (391)
Q Consensus 372 ~~ 373 (391)
..
T Consensus 290 ~~ 291 (392)
T PRK10473 290 PS 291 (392)
T ss_pred HH
Confidence 43
No 45
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=6.6e-29 Score=229.33 Aligned_cols=287 Identities=13% Similarity=0.100 Sum_probs=204.6
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
+|..+....+.......++...+...|.+.++ |++.++. +++.+.+.+++++++++.|+++||+|||++++.+.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~--g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~ 103 (452)
T PRK11273 27 RWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDL--GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILA 103 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHH--HHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHH
Confidence 34444555555566666666667788988888 9887776 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhh----hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHH-HHHHHhccccccc
Q 016350 129 IIGASISATTR----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEI 203 (391)
Q Consensus 129 ~i~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~ 203 (391)
+++.+.+++++ +++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|. +.+++.+..+...
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 183 (452)
T PRK11273 104 AAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF 183 (452)
T ss_pred HHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 99999888763 788889999999999998888888889999999999999999999999885 4566554333333
Q ss_pred cchhHHHHHHHHHHHHHH-HHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCcccc-chhc
Q 016350 204 AGWWRICFWVSIVPAAIL-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVK-FEEL 281 (391)
Q Consensus 204 ~~~w~~~f~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 281 (391)
.+ ||+.|++.+++.++. ++..+++||+|+....+ +.++.++... . +..+.++++.+.... ...+
T Consensus 184 ~g-w~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~~~~~ 249 (452)
T PRK11273 184 ND-WHAALYMPAFAAILVALFAFAMMRDTPQSCGLP-PIEEYKNDYP---D---------DYNEKHEQELTAKQIFMQYV 249 (452)
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC-Chhhhhhccc---c---------ccccccCCCccHHHHHHHHH
Confidence 45 999999877766664 44456678876532111 1111000000 0 000000000000111 1235
Q ss_pred ccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh--CchH
Q 016350 282 LYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL--GRKA 352 (391)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~ 352 (391)
++++.+|...+..++.....+....++|.|+.+..+.+....+....+..++.+++.++.|+++||+ +||.
T Consensus 250 ~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~ 322 (452)
T PRK11273 250 LPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG 322 (452)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 6788888877777676666666667788888776665555667777788889999999999999998 4454
No 46
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=4.1e-28 Score=219.45 Aligned_cols=277 Identities=18% Similarity=0.145 Sum_probs=206.5
Q ss_pred hHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHH
Q 016350 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (391)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 129 (391)
.+.+..+.++.++.........+.+|.+.+++|.+.++. |++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~--G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQV--GVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344667778888889999999999999999999987766 999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHH
Q 016350 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (391)
Q Consensus 130 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 209 (391)
++.+++++++|++.++++|+++|++.+...+.....+.+..++++|+++++.+..+..+|..+|+.+++.+.+... |..
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~-~~~ 161 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELM-SVL 161 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-chH
Confidence 9999999999999999999999999999988888888899999999999999999999999999999998876542 222
Q ss_pred HHHHHHHHHHHHHHHhh-ccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchh
Q 016350 210 CFWVSIVPAAILCLAMV-FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (391)
Q Consensus 210 ~f~~~~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (391)
.+. .+..........+ ..+|++ .+ + ++..+..+.+++|.++
T Consensus 162 ~~~-~~~~~~~~~~~~~~~~~~~~------~~----------------------------~---~~~~~~~~~~~~~~~~ 203 (381)
T PRK03633 162 PWV-TGLVLAAILPLLFTRILNQQ------AE----------------------------N---HDSTSIWPMLKLRQAR 203 (381)
T ss_pred HHH-HHHHHHHHHHHHHhcccCCC------CC----------------------------C---CCCCCHHHHHHhcchH
Confidence 222 2222211111111 111110 00 0 0011234556667766
Q ss_pred HHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 016350 289 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (391)
......+.........+.++|.|.++ .+.+....+.......++.+++++..|++.||+++|+.+..+.....++.+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 282 (381)
T PRK03633 204 LGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM 282 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 54433333333333334456666654 23333345667778888999999999999999999998888777777665544
No 47
>PRK11043 putative transporter; Provisional
Probab=99.96 E-value=6.4e-28 Score=219.90 Aligned_cols=273 Identities=19% Similarity=0.189 Sum_probs=206.5
Q ss_pred HHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHH
Q 016350 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 135 (391)
+........+....+.|.+|.+.+++|.++++. ++..+++.+++.++++++|+++||+|||+++..+.++.+++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 88 (401)
T PRK11043 11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAV--SASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGM 88 (401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHH
Confidence 333345555667788899999999999987776 999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHH
Q 016350 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (391)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~ 215 (391)
+++++++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+..+ ||+.|++.+
T Consensus 89 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~~~~~~~~ 167 (401)
T PRK11043 89 LWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFG-WQAIFATLF 167 (401)
T ss_pred HHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHH
Confidence 9999999999999999999988888888899999999999999999988899999999999999988888 999999887
Q ss_pred HHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHH
Q 016350 216 VPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGST 295 (391)
Q Consensus 216 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (391)
+..++..+..++++|+++ ++++++ ...+++++++++.++...+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~----~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~ 213 (401)
T PRK11043 168 AITLLLILPTLRLKPSKK----ARKQSQ------------------------------DALTFKQLLKSKTYLGNVLIFA 213 (401)
T ss_pred HHHHHHHHHHHHcCCCCC----ccccch------------------------------HHHHHHHHHcChhHHHHHHHHH
Confidence 777776665555655432 100000 0112344566666655444333
Q ss_pred HHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 016350 296 LFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 366 (391)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (391)
+.....+....+.+.+..+ ++.+....+.......++..++.++.+++.||+++|+.........+++.+
T Consensus 214 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~ 283 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVI 283 (401)
T ss_pred HHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 3333333333445555543 344444456666667788889999999999999998876655555444443
No 48
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.8e-28 Score=210.28 Aligned_cols=290 Identities=15% Similarity=0.102 Sum_probs=242.8
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+.+.+.+.+..+...+..+-+.+.+++.+.+.+|+|+|++|. +++.++..+..++..++.|.+.||+|.|++...+.+
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~--~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQK--GLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHH--HHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 334556666677777777888888999999999999999988 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhH---HHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc
Q 016350 127 PMIIGASISATTRNL---IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~---~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (391)
+..+.++..+++.++ +++++++++.|++.+. +.....++++|||||++|.++|+.. ..++|..+..++++.+...
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~ 165 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVA 165 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhcccce-ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHH
Confidence 999999999998654 4999999999996554 4677889999999999999999999 8899999999999988887
Q ss_pred cch--hHHHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchh
Q 016350 204 AGW--WRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEE 280 (391)
Q Consensus 204 ~~~--w~~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (391)
.+. ||..-.+..+..++..+.. +...+.|+.....+ +..+...+.
T Consensus 166 ~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~--------------------------------~~~~~~~~~ 213 (417)
T COG2223 166 FGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVK--------------------------------PQLPAQLKA 213 (417)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcccc--------------------------------ccchhHHHH
Confidence 773 8988888777777755554 44544443210000 000033556
Q ss_pred cccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHH
Q 016350 281 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 360 (391)
++++++.|...+.++..+........+++.|+.+.++.+..+++.......+.+.+.++++|+++||+|.++.+.+.+..
T Consensus 214 v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~ 293 (417)
T COG2223 214 VFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVG 293 (417)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHH
Confidence 77789999999999999999988889999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHh
Q 016350 361 MAVSMAIQVAAS 372 (391)
Q Consensus 361 ~~~~~~~~~~~~ 372 (391)
++++........
T Consensus 294 ~~~~~~~l~~~~ 305 (417)
T COG2223 294 MALAAALLSLFL 305 (417)
T ss_pred HHHHHHHHHccc
Confidence 888888877665
No 49
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.96 E-value=3.2e-29 Score=226.89 Aligned_cols=276 Identities=16% Similarity=0.111 Sum_probs=212.0
Q ss_pred HHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh
Q 016350 59 SSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (391)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 138 (391)
+++...++....++..|.+.+++|.+.++. +++.+++.++..++.++.|+++||+|||++++.+.++.+++.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 80 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDL--GLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS 80 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHH--HHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh
Confidence 455667788888889999999999988877 899999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHH-HhccccccccchhHHHHHHHHHH
Q 016350 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL-LIGIPVKEIAGWWRICFWVSIVP 217 (391)
Q Consensus 139 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~w~~~f~~~~~~ 217 (391)
++++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|..+++ .+++.+.+..+ ||+.|++.+++
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 159 (379)
T TIGR00881 81 TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS-WHWVFIVPGII 159 (379)
T ss_pred hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC-chhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 56666666667 99999987776
Q ss_pred HHHHHH-HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHH
Q 016350 218 AAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTL 296 (391)
Q Consensus 218 ~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (391)
.++..+ ..++.+|+|+....+.++++..+. .+ .+..+.+++........++++++|.++...+..++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (379)
T TIGR00881 160 AIIVSLICFLLLRDSPQSCGLPPAEEMPNEE------PD------GDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVF 227 (379)
T ss_pred HHHHHHHHheeeCCCccccccCccccCcccc------cc------cccccccccccchHHHHHHHHhcchHHHHHHHHHH
Confidence 665544 445566665321100000000000 00 00000001111122334567788888877777776
Q ss_pred HHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhC
Q 016350 297 FALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLG 349 (391)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 349 (391)
..........+.+.|..+.++.+..+.+.......++..++.++.+++.||..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~ 280 (379)
T TIGR00881 228 VYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLF 280 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHc
Confidence 66666666667778877766666666788888889999999999999999864
No 50
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=1e-27 Score=218.01 Aligned_cols=267 Identities=14% Similarity=0.167 Sum_probs=203.7
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
.++.+.+..+......+......|.+|.+.+++|.++++. +++.+.+.+++.++++++|+++||+|||+++..+..+.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAV--QAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHH
Confidence 3555666666666767777788899999999999988877 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
.++.+++.++++++.+++.|++.|++.+...+....+..|.+++++|+++.+..+.+..+|..++|.+++.+.+..+ ||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g-~~ 162 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFG-WR 162 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hH
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999888778 99
Q ss_pred HHHHHHHHHHHHHHH-HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccch
Q 016350 209 ICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (391)
Q Consensus 209 ~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
+.|++.++..++..+ ..++.||+++. ++++++. ...+++.+++|.+
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------------------~~~~~~~~~~~~~ 209 (394)
T PRK11652 163 ACYLFLLLLGAGVTFSMARWMPETRPA---DARRTRV------------------------------LASYRTLLSNRRF 209 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCcc---ccchhHH------------------------------HHHHHHHHcChHH
Confidence 999987766655443 34556776421 0010000 1123345566666
Q ss_pred hHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCch
Q 016350 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK 351 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 351 (391)
+...+..+.............+.+..+.++.+....+.......++.+++.++.+++.||.+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~ 273 (394)
T PRK11652 210 NCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL 273 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6544443333333222233445555555555555556666677778888888889999988743
No 51
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=2.2e-28 Score=221.73 Aligned_cols=301 Identities=17% Similarity=0.157 Sum_probs=232.4
Q ss_pred chhhHHHHHHHHHHHHhhhhhhccc-chHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVN-EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 125 (391)
|.....+..++..++....+...++ +.+-.+.+|.+...++. +.+.+++.++++++.++++.+.||++..+.+....
T Consensus 41 K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l--~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~ 118 (495)
T KOG2533|consen 41 KLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQL--GVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSG 118 (495)
T ss_pred HHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhh--hhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHH
Confidence 3334444555555666666654432 33445668888877777 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc----
Q 016350 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK---- 201 (391)
Q Consensus 126 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~---- 201 (391)
+++++..++.+..+|++.+++.|++.|+..+..+|....+++.||.+++|++.++++.+...+|.++|.+++..+.
T Consensus 119 ~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~ 198 (495)
T KOG2533|consen 119 ILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNG 198 (495)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcC
Confidence 9999999888889999999999999999999999999999999999999999999999999999999999998863
Q ss_pred --cccchhHHHHHHHHHHHHHHHHH-hhccccchhHH--HHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccc
Q 016350 202 --EIAGWWRICFWVSIVPAAILCLA-MVFCAESPHWL--YKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIV 276 (391)
Q Consensus 202 --~~~~~w~~~f~~~~~~~~~~~~~-~~~~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (391)
...| |||.|++.+++.++..+. ++++|+.|... ..+++++-..+..++ .......++.+..
T Consensus 199 ~~~~~g-W~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~-------------~~~~~~~~~~~~~ 264 (495)
T KOG2533|consen 199 SGGLAG-WRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRE-------------SPSGGIENKFKWK 264 (495)
T ss_pred CCCcCC-ceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHh-------------ccCCCcccccCHH
Confidence 3345 999999998888877654 57789988621 111111000011100 0001111114556
Q ss_pred cchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhh----hCchH
Q 016350 277 KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK----LGRKA 352 (391)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~~~ 352 (391)
.+++.++++..|...++.++......+..++.|.|+.+..+.+..+++.+..+..++++++.+++|+++|| ..+|.
T Consensus 265 ~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~ 344 (495)
T KOG2533|consen 265 GFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRL 344 (495)
T ss_pred HHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHH
Confidence 78889999999999999999999988888888888887445667778889999999999999999999999 55565
Q ss_pred HHHHHHHHHHH
Q 016350 353 LLQWSFFSMAV 363 (391)
Q Consensus 353 ~~~~~~~~~~~ 363 (391)
.......+..+
T Consensus 345 ~~~~~~~~~~~ 355 (495)
T KOG2533|consen 345 LFIVFLCLYAI 355 (495)
T ss_pred HHHHHHHHHHH
Confidence 55554444443
No 52
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.96 E-value=6.2e-28 Score=218.36 Aligned_cols=268 Identities=15% Similarity=0.198 Sum_probs=209.6
Q ss_pred hhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHH
Q 016350 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (391)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l 144 (391)
+...+..|.+|.+.+++|+++++. +++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+
T Consensus 5 ~~~~~~~p~~~~~~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 5 LAIDMYLPALPVIAADFGVSAGSV--QMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred hHHHHHhccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 445667799999999999988777 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 016350 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~ 224 (391)
++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+ ||+.|++.++..++..+.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988777 999999877776665444
Q ss_pred -hhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhh
Q 016350 225 -MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLS 303 (391)
Q Consensus 225 -~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (391)
.++.||+++.. ++++.+. ++...++++.+++|..+...+...+.......
T Consensus 162 ~~~~~~~~~~~~--~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (377)
T PRK11102 162 VFFFIPETLPKE--RRQPFHL---------------------------RTTIRNFASLFRHKRVLGYMLASGFSFAGMFS 212 (377)
T ss_pred HHHhCCccCccc--ccCCCCh---------------------------HHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 45566653210 0000000 00011234566667766555544444433333
Q ss_pred chhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHH
Q 016350 304 GINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVS 364 (391)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (391)
...+.+.+..+.++.+..+.+.......++..++.++.+++.||+++|+.+..+.....+.
T Consensus 213 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~ 273 (377)
T PRK11102 213 FLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIM 273 (377)
T ss_pred HHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3344455555555656566778888889999999999999999999999888777654443
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=8.9e-28 Score=217.50 Aligned_cols=272 Identities=13% Similarity=0.058 Sum_probs=205.3
Q ss_pred HHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 134 (391)
.++++.++..++........+.+.+|++.+..+. +++.+.+.+++.++.+++|+++||+|||++++.+.++.+++++.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~ 84 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQ--PLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL 84 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH
Confidence 4556667766655555666677788988876655 89999999999999999999999999999999999999999988
Q ss_pred HHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH
Q 016350 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (391)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~ 214 (391)
++++.+. ++.|+++|++.+...|...+++.|++|+++|+++.++.+....+|.++||.+++.+.+.. |+..+.+.
T Consensus 85 ~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~--~~~~~~i~ 159 (393)
T PRK11195 85 MLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH--AEAALAVC 159 (393)
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Confidence 8777664 778999999999999999999999999999999999999999999999999999998753 77777666
Q ss_pred HHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHH
Q 016350 215 IVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGS 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
+...++..+..+.+||+|+... +++.+..+..+ +. ....+.++++|.++......
T Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~-------------~~----------~~~~~~l~~~~~~~~~~~~~ 214 (393)
T PRK11195 160 ALIYLLAALFNLFIPRLGARRP--GQSWNPIALLR-------------DF----------FHACRVLWRDKLGRFSLAGT 214 (393)
T ss_pred HHHHHHHHHHHhcCCCCccccc--ccCCCHHHHHH-------------HH----------HHHHHHHHhCchhHHHHHHH
Confidence 5554444455566777653211 00000000000 00 00123556667766555444
Q ss_pred HHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHH
Q 016350 295 TLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSF 358 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 358 (391)
.+............+.|.++.++.++.+.|......+++.++++++.+++.||.++++.+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~ 278 (393)
T PRK11195 215 TLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI 278 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH
Confidence 4444444444456667888888888888899999999999999999999999988887776664
No 54
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=1.3e-27 Score=217.72 Aligned_cols=278 Identities=18% Similarity=0.173 Sum_probs=201.2
Q ss_pred hHHHHHHHHHHHHhhhhhhcccchHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 50 FPHVLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
++.+..+.+..++..++..+..+.+|. +.+++|.+..+. |++.+++.+++.+++++.|+++||+|||++++.+.++.
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLA--GLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHH--HHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 344566777788888888888899986 678899987776 99999999999999999999999999999999999988
Q ss_pred HHHHHHHHhh--------hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccc
Q 016350 129 IIGASISATT--------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (391)
Q Consensus 129 ~i~~~~~~~~--------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (391)
+++.+.+.++ .++..+++.|+++|++.+...+....++.|++|+++|++++++.+.+..+|..+++.+++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 8887766543 25678899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchh
Q 016350 201 KEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEE 280 (391)
Q Consensus 201 ~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (391)
.+..+ |++.+++..+..++..+.....|++++ + + ++ + .++++
T Consensus 172 ~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~-~~-~------------------------------~~~~~ 213 (399)
T PRK05122 172 YHWGG-LAGLGLLIMLLALLGLLLARPRPAVPP----V-K-GE-R------------------------------LPFRR 213 (399)
T ss_pred HHccc-HHHHHHHHHHHHHHHHHHHhcCCCCCC----C-C-cc-c------------------------------hhHHH
Confidence 88888 999988766655444333332333211 0 0 00 0 00111
Q ss_pred cccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHH
Q 016350 281 LLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (391)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 360 (391)
.++ +.+.......+..+.......+.+.|..+ .+. ...+.......++.+++.++.+++.||+++|+.+..+..+
T Consensus 214 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~ 288 (399)
T PRK05122 214 VLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLV 288 (399)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 111 11111111112222222223344444432 121 2345566677888899999999999999999988888887
Q ss_pred HHHHHHHHHHHh
Q 016350 361 MAVSMAIQVAAS 372 (391)
Q Consensus 361 ~~~~~~~~~~~~ 372 (391)
..++.+++...+
T Consensus 289 ~~~~~~~~~~~~ 300 (399)
T PRK05122 289 EILGLLLLWLAP 300 (399)
T ss_pred HHHHHHHHHHhc
Confidence 777777666544
No 55
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=5.3e-28 Score=218.86 Aligned_cols=281 Identities=19% Similarity=0.204 Sum_probs=230.5
Q ss_pred HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh--hHHHHHHHHHHhhhcc
Q 016350 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGM 155 (391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~ 155 (391)
..+++++.++. +++.+.++.|+.+++++.|++.||+|.|+++..+.++.++++++...+. +++.+++.|++||++.
T Consensus 65 ~~~~~ws~~~k--~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 65 AGEYDWSSTEK--GLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQ 142 (466)
T ss_pred CceecCCHHHH--HHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHH
Confidence 34677776665 9999999999999999999999999999999999999999999998875 4457788999999999
Q ss_pred chhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc-cchhHHHHHHHHHHHHHHHHHh-hccccchh
Q 016350 156 GLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI-AGWWRICFWVSIVPAAILCLAM-VFCAESPH 233 (391)
Q Consensus 156 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~w~~~f~~~~~~~~~~~~~~-~~~~e~~~ 233 (391)
|..+|....+.+.|.|++||++..++...+..+|.+++.+++|.+.+. .| |++.|++.+..+++..+++ ++..|+|.
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G-W~sifY~~g~~g~i~~~~w~~~~~d~P~ 221 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLG-WPSIFYVFGIVGLIWFILWFLFYSDSPS 221 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC-CchHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999988 67 9999999999999887777 44566664
Q ss_pred HHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHH
Q 016350 234 WLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSS 313 (391)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (391)
.. +.-.+++.+.+++-. ..+..++....+++++++++.+|..++..++..........+.|.|+.
T Consensus 222 ~h--~~is~~El~~I~~~k-------------~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~ 286 (466)
T KOG2532|consen 222 KH--PNISEKELKYIEKGK-------------SEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLK 286 (466)
T ss_pred cC--CCCCHHHHHHHHhcc-------------cccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 21 111122222211110 001111125778999999999999999999999999999999999999
Q ss_pred HHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCc---------hHHHHHHHHHHHHHHHHHHHHhccCC
Q 016350 314 SVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGR---------KALLQWSFFSMAVSMAIQVAASSSYI 376 (391)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (391)
++++.+-.+.|+..++..+...+..+++|.++||..+ |-.-.++....+++++.+.+......
T Consensus 287 ~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~ 358 (466)
T KOG2532|consen 287 EVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHR 358 (466)
T ss_pred HHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcc
Confidence 9999999999999999999999999999999999755 22334567777777777777766554
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=2.2e-27 Score=215.49 Aligned_cols=283 Identities=15% Similarity=0.152 Sum_probs=215.7
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+.+++...+..++......+.+|.+++++|++..+. |++.+.+.+++.+++++.|++.||+|||++++.+.++++++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~--g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQA--ALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 556667778888888888999999999999988776 999999999999999999999999999999999999999999
Q ss_pred HHHHh---hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc------
Q 016350 133 SISAT---TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI------ 203 (391)
Q Consensus 133 ~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------ 203 (391)
++... .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.+++.+...
T Consensus 83 ~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 83 FLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 88644 468999999999999999999999999999999999999999999999999999999998766422
Q ss_pred --------------------cchhHHHHHHHHHHHHHHHHHhhc--cccchhHHHHcCCHHHHHHHHHHHhCCCCchhHH
Q 016350 204 --------------------AGWWRICFWVSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSL 261 (391)
Q Consensus 204 --------------------~~~w~~~f~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (391)
.+ ||++|.+.+++.++..+...+ .||.++ ++ ++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~-w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----~~-~~------------------ 217 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLAS-VQTPYMIIGAVVLAVALLIMLTKMPALNH-----SD-AK------------------ 217 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cc-cc------------------
Confidence 23 999998877766665444433 332110 00 00
Q ss_pred HHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCC---hhHHHHHHHHHHHHHH
Q 016350 262 AELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS---SGLANVFVGIANLLGS 338 (391)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 338 (391)
+.+...+.++++++|.++...+..+++........++++.|..+.. .+.+ ++........+..+|+
T Consensus 218 ---------~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~--~~~~~~~a~~~~~~~~~~~~vGR 286 (410)
T TIGR00885 218 ---------QISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLI--PGMTAGFAANYNIGAMVIFFISR 286 (410)
T ss_pred ---------cccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH
Confidence 0001112345677788887777777766666555555555554311 1222 2334445557788999
Q ss_pred HHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhc
Q 016350 339 VVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 373 (391)
Q Consensus 339 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (391)
++++++.||+++|+.+.+......+.+++..+.+.
T Consensus 287 ~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~ 321 (410)
T TIGR00885 287 FIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGG 321 (410)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999888888777777777666443
No 57
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.96 E-value=1.2e-27 Score=220.10 Aligned_cols=286 Identities=13% Similarity=0.070 Sum_probs=206.7
Q ss_pred hHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHH
Q 016350 50 FPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI 129 (391)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~ 129 (391)
++.+....+................|.+.+ +|.+.++. +++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~--g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGEL--GFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHh--HHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 444555556666666666666777787775 58887776 899999999999999999999999999999999999999
Q ss_pred HHHHHHHhh----hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc-cc
Q 016350 130 IGASISATT----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-IA 204 (391)
Q Consensus 130 i~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~ 204 (391)
++.++.++. +++..+.+.|++.|++.+..++.....+.|++|+++|++++++.+.+..+|..+++.+.+...+ ..
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 998887764 4677888899999999999988888999999999999999999999999998888877665443 44
Q ss_pred chhHHHHHHHHHHHHHHH-HHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccc
Q 016350 205 GWWRICFWVSIVPAAILC-LAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLY 283 (391)
Q Consensus 205 ~~w~~~f~~~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (391)
+ ||+.|++.++..++.. +..+++||+|+....+ +.+..+ ++.. .. .. .+.+.+.+.+....+.+++
T Consensus 183 ~-w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~-~~-~~--~~~~~~~~~~~~~~~~~~~ 249 (438)
T TIGR00712 183 D-WHAALYFPAICAIIVALFAFAMMRDTPQSCGLP--PIEEYR------NDYP-DD-YN--EKAEQELTAKEIFMQYVLP 249 (438)
T ss_pred h-hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCC--Cchhcc------cccc-cc-cc--cccccccchHHHHHHHHcc
Confidence 5 9999999887776654 4456677776431100 000000 0000 00 00 0000000000011124678
Q ss_pred ccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCch
Q 016350 284 GRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK 351 (391)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 351 (391)
++.++...+..++.....+....+.|.|+.+..+.+...++....+..++++++.+++|++.||++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 250 NKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 88888777666666655556666778888776666666678888888999999999999999999643
No 58
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=3.5e-27 Score=221.96 Aligned_cols=288 Identities=21% Similarity=0.194 Sum_probs=220.0
Q ss_pred hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchh
Q 016350 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLG 158 (391)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 158 (391)
+.+..+.... .+..+++++|..+|++++|+++||+|||++++.++++..++.+..++++|++.+++.|+++|++.++.
T Consensus 111 ~~~c~~~~~~--~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 111 NLVCDSSTLV--ALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred ceeeCcHhHH--HHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccch
Confidence 4444443333 78899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHc
Q 016350 159 PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKK 238 (391)
Q Consensus 159 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~ 238 (391)
......+++|++++++|+.+..+ ......+..+++..++++.. + ||+.+++..++.++.++.+++.||+|+|+..+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~-Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~ 264 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--D-WRWLFWIISIPSGLFLLLWFLPPESPRWLLSK 264 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--h-HHHHHHHHHHHHHHHHHHHHccCcChHHHHHc
Confidence 99999999999999999999999 66677777777777777776 4 99999999999888877777777999999999
Q ss_pred CCHHHHHHHHHHHhCCC----CchhHHHHh---hhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHh
Q 016350 239 GRTAEAEAEFEKLLGGS----HVKSSLAEL---SKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYF 311 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (391)
++.+++.+.+++..+.+ ......... +..+.....+...+.++++.++++...+...+..+.....++.+...
T Consensus 265 g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~ 344 (521)
T KOG0255|consen 265 GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLN 344 (521)
T ss_pred CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhh
Confidence 99999998888876432 111111111 11111122233557888888765544444433332222212212111
Q ss_pred HHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhccCC
Q 016350 312 SSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYI 376 (391)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (391)
....+.+........+.....+....+...|+.|||.....+..+..++++...+......
T Consensus 345 ----~~~lg~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (521)
T KOG0255|consen 345 ----VSGLGGNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLG 405 (521)
T ss_pred ----hhhcCchHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccch
Confidence 1223444556666677788888888899999999999999999999999999988876654
No 59
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=4.1e-27 Score=212.89 Aligned_cols=276 Identities=16% Similarity=0.109 Sum_probs=202.8
Q ss_pred HHHHHhhhhhhcccchHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHH-hhHHHHHHHHHH
Q 016350 58 LSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL-CALPMIIGASIS 135 (391)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~i~~~~~ 135 (391)
+..+...+......|.+|. +.+++|.+..+. |++.+++.+...+.+++.|+++||+||||.++. +..+..++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMI--GLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 3466677777788888886 567899987776 999999999999999999999999999887654 666667778888
Q ss_pred HhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchH--HHHHHHHHHHHHHHHHHhccccccccchhHHHHHH
Q 016350 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTY--GAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (391)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~ 213 (391)
+++++++.+++.|+++|.+.+...|...++..|+.|+++|++. .+....+.++|..+++.+++.+.+..+ ||+.|++
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~-~~~~f~~ 160 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFG-FTVMFLT 160 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcc-cHHHHHH
Confidence 9999999999999999988888888888889999887777654 577888889999999999999988888 9999999
Q ss_pred HHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHH
Q 016350 214 SIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (391)
Q Consensus 214 ~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
.++..++..+.. +++||+|+... +++ ...+.++.+++++++....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~------------------------------~~~~~~~~~~~~~~~~~~~ 206 (375)
T TIGR00899 161 AALAFVLCGVLVWLFLPSYPRGAP----GAL------------------------------TRLEVRGLLASRDTRLLFV 206 (375)
T ss_pred HHHHHHHHHHHHHHhCCCcccCcc----ccc------------------------------CcchhhhhhcCcchHHHHH
Confidence 888766655544 45777653110 000 0001223455666665555
Q ss_pred HHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 016350 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 370 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (391)
..++............+.|..+.++.+....+.......+...++.++.|++.||++||+.+.++.....+....+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 207 ACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 444444433333445666666655655555666666666677788899999999999999887776665555444443
No 60
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=2.1e-28 Score=231.96 Aligned_cols=305 Identities=15% Similarity=0.138 Sum_probs=228.1
Q ss_pred HHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHH
Q 016350 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (391)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 133 (391)
+.+++..+.........+..++.+.++|+++.++. |++.+.+.++++++.++.+++.||+|||+++.++.++++++++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~--G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSS--GLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcc--eeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 34444666667777888999999999999998887 9999999999999999999999999999999999999999999
Q ss_pred HHHhhh---------------------------------------------------hHHHHHHHHHHhhhccchhhHHH
Q 016350 134 ISATTR---------------------------------------------------NLIGMLLGRFVVGTGMGLGPTVA 162 (391)
Q Consensus 134 ~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~g~~~~~~ 162 (391)
++++.+ .+..++++|+++|+|.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 988763 24567889999999999999999
Q ss_pred HHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc---------------------chhHHHHHHHHHHHHHH
Q 016350 163 ALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---------------------GWWRICFWVSIVPAAIL 221 (391)
Q Consensus 163 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------------~~w~~~f~~~~~~~~~~ 221 (391)
.+++.|++|+++|+++++++..+..+|..+|+++++.+.+.. |.|+..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998876532 12777888888777776
Q ss_pred HHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHh
Q 016350 222 CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQ 301 (391)
Q Consensus 222 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (391)
.+.++++|++.+....+.+.++.++.... ....... .+......+....+++++++|.++...+..++.....
T Consensus 274 ~v~l~~~p~~lp~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~ 346 (633)
T TIGR00805 274 SIPFFFFPKALPKEGKRVNVDVHETEKLE-KSEDKSR------KKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAF 346 (633)
T ss_pred HHHHHhCccccCCcccccchhhhhhhccc-ccccccc------hhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 66666677652210000000000000000 0000000 0000000111234667899999999888888888888
Q ss_pred hhchhhHHHhHHHHHhhcCCChhHHHHHHHH-HHHHHHHHHHHHHhhhCc--hHHHHHHHHHHHHHHHH
Q 016350 302 LSGINAIFYFSSSVFKSAGLSSGLANVFVGI-ANLLGSVVAMVLMDKLGR--KALLQWSFFSMAVSMAI 367 (391)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~~~~~ 367 (391)
.....++|.|++..++.+...++.......+ +.+++.+++|+++||++. |+.+..+.++..++.++
T Consensus 347 ~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 347 NGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 8888899999998888887777877766665 567999999999999984 56666666666655443
No 61
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.96 E-value=1.1e-26 Score=211.39 Aligned_cols=280 Identities=13% Similarity=-0.005 Sum_probs=196.9
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+....++.++.........+.++.+.+|+|.++++. |++.+.+.+++.+++++.|++.||+|||+++..+.++.++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~ 92 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQS--ASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGH 92 (402)
T ss_pred hhHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHh--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 334444545555554445556777889999988777 999999999999999999999999999999999999999887
Q ss_pred HHHH---h-hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHH-HHHHHhccccccccchh
Q 016350 133 SISA---T-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGL-MGSLLIGIPVKEIAGWW 207 (391)
Q Consensus 133 ~~~~---~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~~w 207 (391)
+++. . .++++.+++.|+++|++.+...+.....+.+++|+++|++++|+.+.+.++|. .+++.+++.+.+..+ |
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-~ 171 (402)
T TIGR00897 93 AAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-E 171 (402)
T ss_pred HHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-h
Confidence 7653 3 35788889999999999988888888889999999999999999999999996 689999988887777 5
Q ss_pred HHHHHHHHHHHHHHHH-HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccc
Q 016350 208 RICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH 286 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (391)
+..++......++..+ ..++.++.++.. +.++++. ..+....+++++++|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--------------------------~~~~~~~~~~~~~~~~ 223 (402)
T TIGR00897 172 MNTLWSALAFVLTGGVIALFSNKDIFTPQ--HMQTREK--------------------------FSELGKAATILFTNPN 223 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCcc--cccCCcc--------------------------hhhHHHHHHHHHcChh
Confidence 5555443332222222 233334331100 0000000 0000112445678888
Q ss_pred hhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHH-HHHHHHHHH
Q 016350 287 FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQ-WSFFSMAVS 364 (391)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~~ 364 (391)
++...+..++.....+....+.|.|..+ ++.+..+.+.......++..+++++.|+++||++||+... .+.....++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~ 301 (402)
T TIGR00897 224 VLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIF 301 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHH
Confidence 8877666666555555555667766644 4555555666777788999999999999999999887654 333333443
No 62
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=4.7e-27 Score=196.44 Aligned_cols=324 Identities=18% Similarity=0.222 Sum_probs=245.1
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhh
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCA 125 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 125 (391)
.+.++........+...+.+.....+.+.|...+.+|++..+. +++....+.|..+++..+|..+|++|||+.+....
T Consensus 73 grfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~--~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~ 150 (528)
T KOG0253|consen 73 GRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQA--PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTF 150 (528)
T ss_pred ccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhh--hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhH
Confidence 4566777777778888877777777788899999999766555 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 126 LPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 126 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
....+...+.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|...+-+. ..+.+|.+....++..+....|
T Consensus 151 l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~g 228 (528)
T KOG0253|consen 151 LVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG 228 (528)
T ss_pred HHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999 778888889999999999888777 9999999999999988888888
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHH--------HHhhh-------cc-c
Q 016350 206 WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSL--------AELSK-------LD-R 269 (391)
Q Consensus 206 ~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-------~~-~ 269 (391)
|||.......+..+.++..+++||+||+...+++++++.+.++++...+..+-.. .+.++ .+ .
T Consensus 229 -wr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~ 307 (528)
T KOG0253|consen 229 -WRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSS 307 (528)
T ss_pred -HHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhc
Confidence 9999998888888888899999999999999999999999988887655321110 00000 00 1
Q ss_pred CCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhc--------------------CC--Chh-HH
Q 016350 270 GDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA--------------------GL--SSG-LA 326 (391)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~--~~~-~~ 326 (391)
..++...+..+++..+-.|..++....++...+. ++.........++.. +. ... .-
T Consensus 308 a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd 386 (528)
T KOG0253|consen 308 AAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD 386 (528)
T ss_pred cccccccchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH
Confidence 1122334455555544333333322222222222 221222222211110 00 011 24
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhccC
Q 016350 327 NVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSY 375 (391)
Q Consensus 327 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (391)
..+..+..+.|.++.++++||+|||+++...+++++++.+++.......
T Consensus 387 llitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn 435 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRN 435 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 5667889999999999999999999999999999999988887765544
No 63
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=7.3e-27 Score=209.43 Aligned_cols=268 Identities=15% Similarity=0.149 Sum_probs=203.0
Q ss_pred hhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHH
Q 016350 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGML 145 (391)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~ 145 (391)
.....++.+|.+.+++|++.++. +++.+++.+++.+++++.|+++||+|||+++..+.++..++.+.+ .+++++.++
T Consensus 15 ~~~~~~~~lp~l~~~~~~s~~~~--g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~ 91 (355)
T TIGR00896 15 ALTSVGPLLPQIRSALGMSFSVA--GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLF 91 (355)
T ss_pred ccccCcccHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHH
Confidence 33567899999999999988877 999999999999999999999999999999999999888888877 778999999
Q ss_pred HHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch-hHHHHHHHHHHHHHHHHH
Q 016350 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCLA 224 (391)
Q Consensus 146 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-w~~~f~~~~~~~~~~~~~ 224 (391)
+.|++.|++.+...+....++.|++| ++|++++++.+.+..+|..+++.+++.+.+..+. ||+.|.+.++..++...
T Consensus 92 ~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~- 169 (355)
T TIGR00896 92 AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL- 169 (355)
T ss_pred HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH-
Confidence 99999999999888888888899886 6899999999999999999999998888765533 99998776654433322
Q ss_pred hhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhc
Q 016350 225 MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSG 304 (391)
Q Consensus 225 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (391)
.++|+.++ ++++ ++.......++++++|.++...+...+.....+..
T Consensus 170 -~~~~~~~~------~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (355)
T TIGR00896 170 -AWIPQVRR------RVAA--------------------------NQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSL 216 (355)
T ss_pred -HHhhhhcc------ccCC--------------------------CCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHH
Confidence 23343311 0000 00001123456677787776655555555555555
Q ss_pred hhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh-CchHHHHHHHHHHHHHHHHHHHHh
Q 016350 305 INAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
..+.|.|..+ .+.+....+.......++.++++++.|++.||+ +||+.+.++..+.+++.+.+.+..
T Consensus 217 ~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 217 IGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh
Confidence 5667777754 355555567788889999999999999999999 466666677777777766665544
No 64
>PRK12382 putative transporter; Provisional
Probab=99.96 E-value=1.4e-26 Score=210.53 Aligned_cols=275 Identities=16% Similarity=0.136 Sum_probs=191.9
Q ss_pred HHHHHHHHHHhhhhhhcccchHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
+..+.++.+.......+..|.+|. +.+|+|.+.++. |++.+++.+++.++++++|+++||+|||++++.+.+...++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~--g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMV--GIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLA 94 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHH--HHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHH
Confidence 444555566667777778888885 578999988877 99999999999999999999999999999999998887776
Q ss_pred HHHHH---h-----hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc
Q 016350 132 ASISA---T-----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (391)
Q Consensus 132 ~~~~~---~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (391)
.+... . .++++.++++|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..++|.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~ 174 (392)
T PRK12382 95 GLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH 174 (392)
T ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 54332 1 368899999999999999998888889999999999999999999999999999999999988887
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccc
Q 016350 204 AGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLY 283 (391)
Q Consensus 204 ~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (391)
.+ ||+.+.+..+..++........||.++. ++++ .+.++..
T Consensus 175 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----------------------------------~~~~~~~- 215 (392)
T PRK12382 175 FG-FAALALTTMVLPLLAWAFNGTVRKVPAH---AGER----------------------------------PSLWSVV- 215 (392)
T ss_pred cC-hHHHHHHHHHHHHHHHHHHHhccCCCCC---cccC----------------------------------chHHHHH-
Confidence 78 9988776554433333222222332110 0000 0001111
Q ss_pred ccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 016350 284 GRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (391)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (391)
+.++.......+..........+.+.|..+. +. ...+.......++.+++.++.|++.||+++|+.+..+..+..+
T Consensus 216 -~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~ 291 (392)
T PRK12382 216 -GLIWKPGLGLALQGVGFAVIGTFVSLYFASK-GW--AMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETV 291 (392)
T ss_pred -HHHHHhHHHHHHHHHHHhHHHHHHHHHHHhc-CC--chhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHH
Confidence 0111111111112222222223344444331 11 1345556667778889999999999999999998888888887
Q ss_pred HHHHHHHHh
Q 016350 364 SMAIQVAAS 372 (391)
Q Consensus 364 ~~~~~~~~~ 372 (391)
+.+++.+.+
T Consensus 292 ~~~~~~~~~ 300 (392)
T PRK12382 292 GLLLLWLAP 300 (392)
T ss_pred HHHHHHHcc
Confidence 777665543
No 65
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=1.2e-26 Score=211.21 Aligned_cols=272 Identities=20% Similarity=0.182 Sum_probs=193.6
Q ss_pred HHhhhhhhcccchHHHhHhhhccCcchhHHHHHHH--HH---HHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHH
Q 016350 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVS--MC---LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS 135 (391)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s--~~---~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~ 135 (391)
+.+.++...++...+.+.+++..+.++.+.+...+ .+ .++..+++++.|+++||+|||++++.+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 45677777778888888888654222222244333 23 33345789999999999999999999999999999999
Q ss_pred HhhhhHH--------HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc------
Q 016350 136 ATTRNLI--------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK------ 201 (391)
Q Consensus 136 ~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------ 201 (391)
++++++. .++++|+++|++.+...+....++.|++|+++|++..++...+..+|.++++.++..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~ 162 (394)
T TIGR00883 83 GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD 162 (394)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 9998875 47889999999999999999999999999999999999999999999999988766543
Q ss_pred --cccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccch
Q 016350 202 --EIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFE 279 (391)
Q Consensus 202 --~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (391)
+..+ ||+.|++.++..++..+.....+|++++...+++ ++....+.+
T Consensus 163 ~~~~~~-w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~ 211 (394)
T TIGR00883 163 ALLEWG-WRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEK------------------------------HKKKRGPIR 211 (394)
T ss_pred Hhhccc-hHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhc------------------------------cccccCCHH
Confidence 2345 9999988777666655555556666432111000 001122334
Q ss_pred hcccccc--hhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHH
Q 016350 280 ELLYGRH--FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWS 357 (391)
Q Consensus 280 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 357 (391)
+.++++. ++......++..........+.+.|..+.++.+....+.......++..++.++.|++.||++||+.+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~ 291 (394)
T TIGR00883 212 ETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIF 291 (394)
T ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 4455444 44444444444444444445666676655555555667778888899999999999999999999877755
Q ss_pred HHHHHH
Q 016350 358 FFSMAV 363 (391)
Q Consensus 358 ~~~~~~ 363 (391)
..+..+
T Consensus 292 ~~~~~~ 297 (394)
T TIGR00883 292 TVLAAL 297 (394)
T ss_pred HHHHHH
Confidence 444433
No 66
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=9.2e-27 Score=214.75 Aligned_cols=286 Identities=13% Similarity=0.094 Sum_probs=201.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
+|..+..+.+...........++..+|.+.+++|.+.++. +++.+.+.++..++.++.|+++||+|||++++.+.++.
T Consensus 17 ~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~--~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~ 94 (455)
T TIGR00892 17 GWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSET--AWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLA 94 (455)
T ss_pred chHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHH--HHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHH
Confidence 4555555555544444445557788999999999988887 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHH-HHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchh
Q 016350 129 IIGASISATTRNLIGMLL-GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (391)
++++++++++++++.+++ .|+++|++.+...+....++.++++ ++|+++.++.+.+..+|..++|.+++.+.+..+ |
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g-w 172 (455)
T TIGR00892 95 SLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFG-W 172 (455)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC-h
Confidence 999999999999998875 5799999999877777788899995 789999999999999999999999999888888 9
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccch
Q 016350 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
|+.|++.+++.++..+..++..+.++... +.+.++ .+ .........+ .......++..+....+++++|.+
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~-~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 243 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRPVGPSQR-VSKSKS-KE---GLPPDGSTKK----LSKKSTAEKINRFLDFSLFTHRGF 243 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcccc-cccccc-cc---cCCCCCcccc----ccccchhhhhhhhcchHHhcCchH
Confidence 99999988777665544433322211000 000000 00 0000000000 000000000001111246788888
Q ss_pred hHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 016350 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL 348 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (391)
+......++.....+....+++.|..+ .+.+....+......+++.++++++.+++.||.
T Consensus 244 ~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 303 (455)
T TIGR00892 244 LVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLK 303 (455)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 877776666666655555666777654 455555677788888899999999999999973
No 67
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=7.1e-26 Score=207.15 Aligned_cols=287 Identities=19% Similarity=0.151 Sum_probs=205.2
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchh---HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTL---AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
....++++.+...+......+.+|.+.+++|.+..+. ..|++.+++.++..+++++.|+++||+|||+++..+.+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 94 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGM 94 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHH
Confidence 3445566677778888888999999999999886543 2478899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
+++.++++++++++.+++.|++.|++.+ ..+....++.|++|+++|+++.++...+..+|..++|.+++.+.+..+ ||
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~~ 172 (408)
T PRK09874 95 GIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYG-LR 172 (408)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HH
Confidence 9999999999999999999999999765 456777889999999999999999999999999999999999888777 99
Q ss_pred HHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccch
Q 016350 209 ICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (391)
Q Consensus 209 ~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
+.|++.++..++..+.. ++.+|+++. .++++..+ . .+..+.++++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~---------------------------~~~~~~~~~~~~ 220 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIRENFQP----VSKKEMLH-M---------------------------REVVTSLKNPKL 220 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCccc----ccchhhhH-H---------------------------HHHHHhCcCCch
Confidence 99998877766654444 445554311 00000000 0 001122344544
Q ss_pred hHHHH-HHHHHHHHhhhchhhHHHhHHHHHhhcCC---ChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 016350 288 RVVFI-GSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (391)
Q Consensus 288 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (391)
+.... ................+.|..+..+.... ..+......+++..++.+..|++.||++||+.+..+.....+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 300 (408)
T PRK09874 221 VLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVL 300 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH
Confidence 43222 22222222222233445555443222111 123445556778888899999999999999998888777776
Q ss_pred HHHHHHHHh
Q 016350 364 SMAIQVAAS 372 (391)
Q Consensus 364 ~~~~~~~~~ 372 (391)
+.+...+..
T Consensus 301 ~~~~~~~~~ 309 (408)
T PRK09874 301 LLIPMSFVQ 309 (408)
T ss_pred HHHHHHHhc
Confidence 666555443
No 68
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=1.7e-32 Score=254.04 Aligned_cols=313 Identities=34% Similarity=0.601 Sum_probs=239.9
Q ss_pred HHHHHHhhhhhhcccchHHHhH--hhhccCcc-------hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHH
Q 016350 57 TLSSFLFGYHLGVVNEPLESIS--LDLGFNGN-------TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (391)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~--~~~~~~~~-------~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 127 (391)
.++.+..+++...++...+... .++..+.+ +...+++.+...+|..+|+++.|+++||+|||+.+..+.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 4455778888877766665444 22222221 22347899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh---hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc
Q 016350 128 MIIGASISATTR---NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (391)
Q Consensus 128 ~~i~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (391)
..+++++.++++ |++.++++|+++|++.|...+....++.|..|+++|++..++.+.+..+|.+++..++..+....
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999 99999999999999999999999999999999999999999999999999999888876653322
Q ss_pred c--hhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcc
Q 016350 205 G--WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (391)
Q Consensus 205 ~--~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (391)
+ .||..+.+..++.++..+..+++||+|+|+..+++.+|+++.+++..+.+..+++.++..+..++.++...++++++
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred ccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 1 39999999999988888888899999999999999999988888865554443333333332222222236678888
Q ss_pred cccc-hhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChh-HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHH
Q 016350 283 YGRH-FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSG-LANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (391)
Q Consensus 283 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 360 (391)
+++. .+.......+..............|.+...+..+.+.. .......+...++.+++.++.||+|||++++.+...
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~ 325 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLL 325 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8765 34444444444445455555566666666665555444 344556677778888888999999999999998888
Q ss_pred HHHHHHHHH
Q 016350 361 MAVSMAIQV 369 (391)
Q Consensus 361 ~~~~~~~~~ 369 (391)
++++.+.+.
T Consensus 326 ~~~~~~~~~ 334 (451)
T PF00083_consen 326 MAICSLILG 334 (451)
T ss_pred ccccccccc
Confidence 887777664
No 69
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.95 E-value=5.2e-27 Score=214.90 Aligned_cols=280 Identities=17% Similarity=0.108 Sum_probs=210.2
Q ss_pred HHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh-
Q 016350 59 SSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT- 137 (391)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~- 137 (391)
..++..+......+.+|.+.++++.+..+. |++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 25 ARFISIFGLGLLGVAVPVQIQMMTGSTLQV--GLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHH
Confidence 345555566677788999999988766555 99999999999999999999999999999999988887777665542
Q ss_pred ----hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH
Q 016350 138 ----TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (391)
Q Consensus 138 ----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~ 213 (391)
.++++.+++.|+++|++.+...+...+++.|++|+++|+++.++......+|..+|+.+++.+.+..+ |++.|++
T Consensus 103 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~-~~~~~~~ 181 (417)
T PRK10489 103 AFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGG-VAWNYGL 181 (417)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHh-hHHHHHH
Confidence 56788999999999999888888889999999999999999999999999999999999999888777 8999998
Q ss_pred HHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHH
Q 016350 214 SIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (391)
Q Consensus 214 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (391)
.++..++..+..+.+||+++.. +++ ++..+. ....++.++++|.++...+.
T Consensus 182 ~~~~~~~~~~~~~~l~~~~~~~--~~~-~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~ 232 (417)
T PRK10489 182 AAAGTFITLLPLLRLPALPPPP--QPR-EHPLRS--------------------------LLAGFRFLLASPVVGGIALL 232 (417)
T ss_pred HHHHHHHHHHHHHhCCCCCCCC--ccc-ccchHH--------------------------HHHHHHHHHcChHHHHHHHH
Confidence 8777776666666677654211 000 000000 00112334566666555444
Q ss_pred HHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
.++... ......+.+.|..+.++.+....+.......++.+++.++.+++.||.++++.+..+....+++.+++.+.
T Consensus 233 ~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 309 (417)
T PRK10489 233 GGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM 309 (417)
T ss_pred HHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc
Confidence 433322 22334566777776666666667788888899999999999999999877777777777777776655543
No 70
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=6.4e-26 Score=203.08 Aligned_cols=261 Identities=28% Similarity=0.429 Sum_probs=219.6
Q ss_pred HHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 134 (391)
.+.+..+....+.....+..|.+.+++|.+.++. +++.+.+.++..+++++.|+++||+|||+.+..+.++..++.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQA--GLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 4455667778888888999999999999887766 89999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH
Q 016350 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (391)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~ 214 (391)
..++++++.+++.|++.|++.+...+....++.|++|+|+|++.+++......+|..+++.+++.+.+..+ ||+.|++.
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 159 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLG-WRWLFLIL 159 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998888 99999998
Q ss_pred HHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHH
Q 016350 215 IVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGS 294 (391)
Q Consensus 215 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (391)
++..++..+...+++ |.++...+..
T Consensus 160 ~~~~~~~~~~~~~~~-------------------------------------------------------~~~~~~~~~~ 184 (352)
T cd06174 160 AILGLLLALLLLFLL-------------------------------------------------------RLLLLLALAF 184 (352)
T ss_pred HHHHHHHHHHHHHHH-------------------------------------------------------HHHHHHHHHH
Confidence 877776655554332 2234444444
Q ss_pred HHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchH-HHHHHHHHHHHHHHHHHHHhc
Q 016350 295 TLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKA-LLQWSFFSMAVSMAIQVAASS 373 (391)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 373 (391)
++..........+.+.+..+..+.+..+.+.......++..++.++.+++.||++||+ .+..+..+..++.+.+....+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 4555444444555666665544555556677888899999999999999999999999 888888888888887776554
No 71
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=1.5e-24 Score=199.09 Aligned_cols=325 Identities=21% Similarity=0.226 Sum_probs=214.7
Q ss_pred HHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH
Q 016350 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (391)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 136 (391)
++......+.....+..++.+..|+|-++.. +|+.+.+.++.+++.++.|+++|.||||.+++.+.++..+|+++++
T Consensus 50 ~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~---~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~a 126 (599)
T PF06609_consen 50 SLAVIAAYFVLVLPASILPYINADIGGSDNW---SWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCA 126 (599)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHhcCCCccc---hHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhh
Confidence 3333334455555667789999999976544 5999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHH
Q 016350 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (391)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~ 216 (391)
.++|...++++-.+.|+|.|.... ....++|..|.|.|+...++...........++.++..+....+ |||.|++.++
T Consensus 127 tA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~-WRw~~~~~~i 204 (599)
T PF06609_consen 127 TAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSG-WRWIFYIFII 204 (599)
T ss_pred cCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCC-cchHHHHHHH
Confidence 999999999999999999888774 45568999999999888877776665656667777766665556 9999999877
Q ss_pred HHHHHHHHh--hccccchhHHHHcCC---HHHHHHHHHHHh------------------CC-C----CchhH--------
Q 016350 217 PAAILCLAM--VFCAESPHWLYKKGR---TAEAEAEFEKLL------------------GG-S----HVKSS-------- 260 (391)
Q Consensus 217 ~~~~~~~~~--~~~~e~~~~~~~~~~---~~~~~~~~~~~~------------------~~-~----~~~~~-------- 260 (391)
...+.++.. ++.|++ +...+++ ..+..+++|.+. +. . .....
T Consensus 205 ~~~i~~vl~~~fY~PP~--~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~ 282 (599)
T PF06609_consen 205 WSGIALVLIFFFYFPPP--RAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFV 282 (599)
T ss_pred HHHHHHHHHHHHhCCCc--hhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHH
Confidence 766654443 233333 2222221 233334444321 00 0 00000
Q ss_pred -HHHhhhcccC-CCCccccchhcccc-cchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCC---ChhHHHHHHHHHH
Q 016350 261 -LAELSKLDRG-DDGDIVKFEELLYG-RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIAN 334 (391)
Q Consensus 261 -~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 334 (391)
+..+.-.|.. ....+.-..+++++ |.+...++..++..+.++......|......++.+.. ..+....+.+++.
T Consensus 283 ~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~ 362 (599)
T PF06609_consen 283 LLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGS 362 (599)
T ss_pred HHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHH
Confidence 0001112221 12234455667776 4555555555566555555445555555555554442 3567778888888
Q ss_pred HHHHHHHHHHHhhhCc-hHHHHHHHHHHHHHHHHHHHHhccCCCCchHhHHhhhhc
Q 016350 335 LLGSVVAMVLMDKLGR-KALLQWSFFSMAVSMAIQVAASSSYIPGSASLYLSVGGM 389 (391)
Q Consensus 335 ~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 389 (391)
..+.++.|.+..+++| |+.++++.+++.+++..++....+.. .....+..+.|+
T Consensus 363 ~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~-~~~i~~~~l~g~ 417 (599)
T PF06609_consen 363 CAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNK-NAAIAFLVLAGF 417 (599)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCc-chHHHHHHHHHH
Confidence 8999999999999887 44556777777766666665544332 223344444443
No 72
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=1.9e-25 Score=202.53 Aligned_cols=279 Identities=11% Similarity=0.063 Sum_probs=208.1
Q ss_pred HHHHHHHHhhhhhhcccchHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 133 (391)
.+....++.........+.+|. +.+++|++..+. |++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~--g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~ 88 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLI--GYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFI 88 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Confidence 4445566666677776777664 567899988777 9999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH
Q 016350 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (391)
Q Consensus 134 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~ 213 (391)
+.+++++++.++++|++.|.+.+...+....+..|.+|+++|+++.++.....++|..++|.+++.+.+ .+ |+..|++
T Consensus 89 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g-~~~~f~~ 166 (395)
T PRK10054 89 AIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS-INLPFWL 166 (395)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc-cCcHHHH
Confidence 999999999999999999988787788888999999999999999999999999999999999998875 46 9999998
Q ss_pred HHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHH
Q 016350 214 SIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (391)
Q Consensus 214 ~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
.++..++..+.. +++||+++ ++++++ . +..+.++.+++|.++...+
T Consensus 167 ~~~~~~i~~i~~~~~~~~~~~----~~~~~~-~----------------------------~~~~~~~~~~~~~~~~~~~ 213 (395)
T PRK10054 167 AAICSAFPLVFIQIWVQRSEK----AIATET-G----------------------------SVWSPSVLLQDKALLWFTC 213 (395)
T ss_pred HHHHHHHHHHHHHHHHhcccc----ccccch-h----------------------------hhhhhhhhccCceehHHHH
Confidence 777766654433 44555421 000000 0 0011245677888877766
Q ss_pred HHHHHHHHhhhchhhHHHhHHHHHhhcCC---ChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 016350 293 GSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (391)
..++..+.......+.+.|.+...+ .+. ..+.......+......+..+++.||.++|+.+..+..+..++...+.
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~ 292 (395)
T PRK10054 214 SGFLASFVSGAFASCISQYVMVVAD-SDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFI 292 (395)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHhcc-cchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHH
Confidence 6666555544444456666654422 222 223455555555666678889999999999998888877777776665
Q ss_pred HH
Q 016350 370 AA 371 (391)
Q Consensus 370 ~~ 371 (391)
+.
T Consensus 293 ~~ 294 (395)
T PRK10054 293 FS 294 (395)
T ss_pred Hc
Confidence 43
No 73
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=3.3e-27 Score=199.69 Aligned_cols=257 Identities=16% Similarity=0.086 Sum_probs=203.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHH
Q 016350 85 GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAAL 164 (391)
Q Consensus 85 ~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~ 164 (391)
.++.++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|++.+...+++.++.++|++++++|.+||+|.+...+...+
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHH
Confidence 34556699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcc-ccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHH
Q 016350 165 YVTEVSPPF-VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAE 243 (391)
Q Consensus 165 ~i~~~~~~~-~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 243 (391)
+++|.||++ +|++++|+...+.++|.++||.+||.+.+..| .+..|.+.++++++-..+.+++-|.. +.++
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l~vi~p~-----~~~~-- 254 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQLLVIEPT-----EMDP-- 254 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHHheeCcc-----ccCc--
Confidence 999999965 57999999999999999999999999999999 89999999999988877776654431 1110
Q ss_pred HHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCCh
Q 016350 244 AEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS 323 (391)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (391)
+...+..++.+++++|..+...................++.+..+.+...+...
T Consensus 255 --------------------------~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~ 308 (464)
T KOG3764|consen 255 --------------------------DSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEV 308 (464)
T ss_pred --------------------------cccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcce
Confidence 112223456677888887766554444444444445566777777666556678
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhCchHHH--HHHHHHHHHHHHHHHHHhccC
Q 016350 324 GLANVFVGIANLLGSVVAMVLMDKLGRKALL--QWSFFSMAVSMAIQVAASSSY 375 (391)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 375 (391)
|+.+.+..+...++..+.|.+.||+++.+++ ..+.+.....+....+.+...
T Consensus 309 G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~ 362 (464)
T KOG3764|consen 309 GLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIA 362 (464)
T ss_pred eeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHH
Confidence 8899999999999999999999999943333 334444444444444444433
No 74
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.94 E-value=5e-25 Score=199.23 Aligned_cols=281 Identities=11% Similarity=0.014 Sum_probs=213.1
Q ss_pred HHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHH----HHhhHHHHHH
Q 016350 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAF----QLCALPMIIG 131 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l----~~~~~~~~i~ 131 (391)
+.+..+..........|.+|.+.+++|.+.+++ |++.+++.+...++++++|+++||+|||+.. ..+..+..+
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~i--g~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~- 85 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMI--GLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH-
Confidence 555667777777888999999999999988777 9999999999999999999999999985433 222222222
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHH
Q 016350 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (391)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 211 (391)
..+..+++++.+++.|+++|.+.+...|...++..|+ +++|++..|....+.++|.+++|++++.+.+..| ||..|
T Consensus 86 -~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g-~~~~f 161 (382)
T TIGR00902 86 -AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFD-EQNIL 161 (382)
T ss_pred -HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcC-hhHHH
Confidence 2445678999999999999999888888888887665 4779999999999999999999999999999888 99999
Q ss_pred HHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHH
Q 016350 212 WVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (391)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
.+.....++..+ .+..+|+++. +++.++ ++.....+.++++|+|+++...
T Consensus 162 ~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~--------------------------~~~~~~~~~~~~l~~~~~~~~l 211 (382)
T TIGR00902 162 AILTAGLAFMLI-GFLIKPTIPP---KDAIPE--------------------------DESQGDSAFIALLKNPMNLRFL 211 (382)
T ss_pred HHHHHHHHHHHH-HHHcCCCCCC---Cccccc--------------------------cccccchhHHHHHcChHHHHHH
Confidence 886554333333 3333443210 000000 0001122356788899998888
Q ss_pred HHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
+..++..........+.+.|.++ .+.+....+.......++.+++.++.+++.||+++|+.+.++.+...+...++.+.
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 212 AAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 87777777776767777777765 56666667778888888999999999999999999999999999999988887765
Q ss_pred hcc
Q 016350 372 SSS 374 (391)
Q Consensus 372 ~~~ 374 (391)
++.
T Consensus 291 ~~~ 293 (382)
T TIGR00902 291 EAF 293 (382)
T ss_pred hhH
Confidence 543
No 75
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=1e-24 Score=198.04 Aligned_cols=279 Identities=13% Similarity=0.056 Sum_probs=199.3
Q ss_pred HHHHHHHhhhhhhcccchHH-HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHH
Q 016350 56 ATLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 134 (391)
+....++.........|.++ .+.+++|++..+. |++.+.+.++..+.+++.|+++||+|||+++..+.++.+++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMV--GIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 33455555555556566665 4678899987776 99999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH
Q 016350 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (391)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~ 214 (391)
+.++++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+. ..+ ||+.|++.
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g-~~~~f~~~ 170 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD-FRLVCATG 170 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-HHHHHHHH
Confidence 9999999999999999999998888888999999999999999999999999999999999999988 556 99999988
Q ss_pred HHHHHHHHHH-hhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHH
Q 016350 215 IVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (391)
Q Consensus 215 ~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (391)
++..++..+. .++.||.+. +.+.++ ...++++++++|.++.....
T Consensus 171 ~~~~~~~~i~~~~~~~~~~~----~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~ 216 (400)
T PRK11646 171 AVLFVLAAAFNAWLLPAYKL----STVRTP------------------------------VREGMTRVLRDKRFVTYVLT 216 (400)
T ss_pred HHHHHHHHHHHHHhCCcccc----cccchh------------------------------hHHHHHHHHcCchHHHHHHH
Confidence 7766655433 344454210 000000 01123455666776654443
Q ss_pred HHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHh-hhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD-KLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
.+...........+.|.|..+..+ .+...+.......++...+....+++.| |.+.++.+..+..+.+++.+++...+
T Consensus 217 ~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~ 295 (400)
T PRK11646 217 LTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS 295 (400)
T ss_pred HHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh
Confidence 333332222223455666655433 3344566666666666555545555554 56656666677777777766665544
Q ss_pred c
Q 016350 373 S 373 (391)
Q Consensus 373 ~ 373 (391)
+
T Consensus 296 ~ 296 (400)
T PRK11646 296 N 296 (400)
T ss_pred h
Confidence 3
No 76
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=1.9e-24 Score=200.80 Aligned_cols=281 Identities=16% Similarity=0.155 Sum_probs=202.8
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-----hhhHH-HHHhhH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRA-FQLCAL 126 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~ 126 (391)
...+.+..+..+......++.+|.+.++.|.+.+++ |.+ +.....+ ++.+++|+++||+ |||+. ++.+.+
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~i--g~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i 89 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVENIDLKTI--GFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQL 89 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHH
Confidence 344555566667777788889999999999887776 664 3444444 6899999999999 99985 667777
Q ss_pred HHHHHHHHHHhh---hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc-
Q 016350 127 PMIIGASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE- 202 (391)
Q Consensus 127 ~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~- 202 (391)
..+++...+++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+
T Consensus 90 ~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~ 169 (491)
T PRK11010 90 LLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR 169 (491)
T ss_pred HHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 777777777775 4788899999999999999999999999999999999999999999999999999999998888
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcc
Q 016350 203 IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (391)
Q Consensus 203 ~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (391)
..| ||..|++.++..++..+..++.||+++.. +++++.. +....++++++
T Consensus 170 ~~G-Wr~~f~i~a~l~ll~~l~~~~~~e~~~~~---~~~~~~~--------------------------~~~~~~l~~~~ 219 (491)
T PRK11010 170 YLG-WQGMYWLMAALLIPCIIATLLAPEPTDTI---PVPKTLE--------------------------QAVVAPLRDFF 219 (491)
T ss_pred ccC-HHHHHHHHHHHHHHHHHHHHhcCCCcccc---ccccchh--------------------------hhHHHHHHHHH
Confidence 456 99999998877777666656677764210 0000000 00011244556
Q ss_pred cccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHH-HHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHH
Q 016350 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLAN-VFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSM 361 (391)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 361 (391)
+++..+......++..........+.+.|+.+.++.+..+.+... ....++.+++.+++|+++||+++|+.+.++.++.
T Consensus 220 ~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~ 299 (491)
T PRK11010 220 GRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQ 299 (491)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 666666555554444444444445566666554555555566665 3455788999999999999999988777666555
Q ss_pred HHHHHH
Q 016350 362 AVSMAI 367 (391)
Q Consensus 362 ~~~~~~ 367 (391)
++..+.
T Consensus 300 ~l~~l~ 305 (491)
T PRK11010 300 GVSNAG 305 (491)
T ss_pred HHHHHH
Confidence 554433
No 77
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.93 E-value=1.3e-24 Score=196.58 Aligned_cols=275 Identities=12% Similarity=0.071 Sum_probs=201.6
Q ss_pred HHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhh----HHHHHhhHHHHHHHHHH
Q 016350 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR----RAFQLCALPMIIGASIS 135 (391)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr----~~l~~~~~~~~i~~~~~ 135 (391)
.+..........|.+|.+.+|+|.+.++. |++.+++.++..++++++|+++||+||| +.+.++..+. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~i--G~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETI--GLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHH--HHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHH
Confidence 45555666788899999999999988777 9999999999999999999999999984 3333222221 22334
Q ss_pred HhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHH
Q 016350 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI 215 (391)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~ 215 (391)
..+++++.+++.|++.|++.+...+...+++.++ +++|+++.+.......+|..+||++++.+.++.+ ||..|++.+
T Consensus 89 ~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g-~~~~f~~~~ 165 (382)
T PRK11128 89 FGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFG-EQAILWILT 165 (382)
T ss_pred HhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcC-hhHHHHHHH
Confidence 4568899999999999999888888888887776 4568889999999999999999999999999888 999998877
Q ss_pred HHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHH
Q 016350 216 VPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGST 295 (391)
Q Consensus 216 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (391)
+..++..+..++.||+++ ++++++ ..++...++++++++|.++...+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~~~--------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~ 215 (382)
T PRK11128 166 AGVASMLLGQLLRPTIMP----QGESRQ--------------------------QESAGWPAWKALLKEPTVWRFLLCVS 215 (382)
T ss_pred HHHHHHHHHHHccCCCCC----cccccc--------------------------ccccccchHHHHHcChhHHHHHHHHH
Confidence 654444443344444311 000000 00011235678888998887777666
Q ss_pred HHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 296 LFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
+............+.|..+ .+.+....+.......++.++..++.+++.||+++|+.+..+....+++.+++...+
T Consensus 216 l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~ 291 (382)
T PRK11128 216 LLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT 291 (382)
T ss_pred HHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6655554445556666644 444444567777777788888999999999999999998888888888777665544
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.93 E-value=9.5e-25 Score=224.43 Aligned_cols=279 Identities=11% Similarity=-0.013 Sum_probs=204.8
Q ss_pred ccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHH---HhhhhHHHHHH
Q 016350 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---ATTRNLIGMLL 146 (391)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~~~~~~l~~ 146 (391)
...+.+.+..+++.+.+....+++.+++.+++.++++++|+++||+|||++++.+.++..++.++. ..+++++.+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 108 (1146)
T PRK08633 29 KILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFA 108 (1146)
T ss_pred HHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 344556666777777666556899999999999999999999999999999999887766555544 34578999999
Q ss_pred HHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc--------cchhHHHHHHHHH-H
Q 016350 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI--------AGWWRICFWVSIV-P 217 (391)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~--------~~~w~~~f~~~~~-~ 217 (391)
+|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|+.+++++.+. .++|++.+.+..+ .
T Consensus 109 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (1146)
T PRK08633 109 VTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAV 188 (1146)
T ss_pred HHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988765 2334554444333 3
Q ss_pred HHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHH
Q 016350 218 AAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLF 297 (391)
Q Consensus 218 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (391)
.++.++..+.+||.|+....+.+.++ .. ........++.+++++.++...+..++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (1146)
T PRK08633 189 AVLGLIFAYRLPKVPAAAPEVFDKKK-YL-----------------------FPKLLWRNLKLLRSDRVLWLAIIGLSYF 244 (1146)
T ss_pred HHHHHHHHhcCcCCCCCCcccccccc-cc-----------------------cHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 33344445566776532111000000 00 0000011244566778777766666666
Q ss_pred HHHhhhchhhHHHhHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 298 ALQQLSGINAIFYFSSSVFKSAGL-SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
.+.......+++.|....++.+.. ..+++.....++.+++.++.+++.||+++++.+.++.++.+++.+++.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 245 WFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh
Confidence 555555566777777777776666 677888888999999999999999999998888888777777776666544
No 79
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.93 E-value=1.6e-23 Score=190.24 Aligned_cols=275 Identities=13% Similarity=0.114 Sum_probs=182.8
Q ss_pred HHHHHHHHhhhhhhcccchHHH-hHhhhccCcchhHHHHHHHHHHH-HHHHHHHHHHHhhhcchhhHHH-HHhhHHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAF-QLCALPMIIG 131 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~i~ 131 (391)
...+..++.........|.+|. +.+++|++.++. |++.+...+ ++.++.+.+++ .||+||||.+ +.+.+..+++
T Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~--g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~ 95 (393)
T PRK15011 19 AFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMV--GFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLA 95 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHH
Confidence 4444567777777777787775 578899988877 888776554 55566655666 9999999875 4566666788
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccc--hHHHHHHHHHHHHHHHHHHhccccccccchhHH
Q 016350 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRG--TYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (391)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~--~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 209 (391)
..+.+++++++.+++.+.+.|...+...+....++.|+.++++|. ...++.+.+.++|.+++|.+++.+.+..| ||.
T Consensus 96 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g-w~~ 174 (393)
T PRK15011 96 CTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS-FTV 174 (393)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC-hHH
Confidence 888889999998876655555445567788888888887766553 44578888999999999999999988888 999
Q ss_pred HHHHHHHHHHHHHHH-hhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchh
Q 016350 210 CFWVSIVPAAILCLA-MVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFR 288 (391)
Q Consensus 210 ~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (391)
.|++.++..++..+. .+++||+++. .+ ++ .+. . + ..++ +.+..+
T Consensus 175 ~f~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~-~~~---------------------~--~----~~~~--~~~~~~ 219 (393)
T PRK15011 175 MYLSAAVAFIVCGVMVWLFLPSMRKE----LP-LA-TGT---------------------L--E----APRR--NRRDTL 219 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhcCccCCC----Cc-cc-ccc---------------------c--c----cccc--ccccHH
Confidence 999888776665544 4557776421 00 00 000 0 0 0000 012222
Q ss_pred HHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 016350 289 VVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (391)
..................+.+.|..+.++.+....+.......++.+++.++.|+++||++||+.+..+.....+.+..+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~ 299 (393)
T PRK15011 220 LLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGM 299 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 22222333333333333456667766666555556666666667788899999999999999988776655555444333
No 80
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.93 E-value=3.8e-24 Score=191.99 Aligned_cols=270 Identities=14% Similarity=0.076 Sum_probs=192.2
Q ss_pred hcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-----hhhHH-HHHhhHHHHHHHHHHHhh---
Q 016350 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRRA-FQLCALPMIIGASISATT--- 138 (391)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~i~~~~~~~~--- 138 (391)
...++.+|.+.+|+|++.++. |+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....++.
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~--g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTI--GFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHH--HHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 456778999999999998877 787655 455554 89999999998 89987 466777787777777777
Q ss_pred hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch-------hHHHH
Q 016350 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-------WRICF 211 (391)
Q Consensus 139 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-------w~~~f 211 (391)
.+.+.+.+..++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..+. ||..|
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 45666777788888888888899999999999999999999999999999999999999888766552 99999
Q ss_pred HHHHHHHHHHHHHhhc-cccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccc---h
Q 016350 212 WVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH---F 287 (391)
Q Consensus 212 ~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 287 (391)
++.++..++..+..++ .+|+++. ++++++..+. ....+++++++|. +
T Consensus 161 ~i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~ 211 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLAKEPQED---ASVPKPLTQA--------------------------VLKPIREFFQRKNMIQA 211 (356)
T ss_pred HHHHHHHHHHHHHHHHhccCCCcc---cccchhHHHH--------------------------HHHHHHHHHHhcCchHH
Confidence 9988877766555443 4554211 0000000000 0112344555554 4
Q ss_pred hHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHH-HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 016350 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 366 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (391)
+...+..++..........+.+.|..+ ++.+..+.+......+ ++.+++.++++++.||+|+|+.+..+.++.+++..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~ 290 (356)
T TIGR00901 212 LLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNA 290 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 444444444455545555667777765 4444444455555444 56789999999999999999998888887777766
Q ss_pred HHHHH
Q 016350 367 IQVAA 371 (391)
Q Consensus 367 ~~~~~ 371 (391)
++.+.
T Consensus 291 ~~~~~ 295 (356)
T TIGR00901 291 GFVWL 295 (356)
T ss_pred HHHHH
Confidence 55543
No 81
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.8e-23 Score=178.39 Aligned_cols=289 Identities=15% Similarity=0.180 Sum_probs=235.9
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i 130 (391)
..++.+....++.++......+.+|.+++.|+++..+. +++...++.++.+.+++.|++.+|+|+|+-++.|+.++++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a--~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~av 90 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEA--SLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAV 90 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHH--HHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHH
Confidence 34556666677888888899999999999999998888 8999999999999999999999999999999999999999
Q ss_pred HHHHHH---hhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc----
Q 016350 131 GASISA---TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI---- 203 (391)
Q Consensus 131 ~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~---- 203 (391)
++.+.. ...+|..++++-++.|.|.+...++.+.+++...++++....+++.+..+++|.+++|++++.+...
T Consensus 91 g~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~ 170 (422)
T COG0738 91 GAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVAL 170 (422)
T ss_pred HHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhh
Confidence 999984 6678999999999999999999999999999999998889999999999999999999999988762
Q ss_pred --------------cchhHHHHHHHHHHHHHHHHHhhc--cccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhc
Q 016350 204 --------------AGWWRICFWVSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKL 267 (391)
Q Consensus 204 --------------~~~w~~~f~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (391)
...||.+|...+...+++.+.... .|+.+. ..+
T Consensus 171 ~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~-----~~~-------------------------- 219 (422)
T COG0738 171 TMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV-----AAP-------------------------- 219 (422)
T ss_pred ccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc-----ccc--------------------------
Confidence 112778888777666666555543 333211 000
Q ss_pred ccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 016350 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK 347 (391)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 347 (391)
+..+.......+++++|+++...+..+++........++++.|+.+..+.+..++....+....+.++|++++.++..|
T Consensus 220 -~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~ 298 (422)
T COG0738 220 -SLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSR 298 (422)
T ss_pred -cccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0001111146778899999999999999999998888888888887755566667788888999999999999999999
Q ss_pred hCchHHHHHHHHHHHHHHHHHHHHhc
Q 016350 348 LGRKALLQWSFFSMAVSMAIQVAASS 373 (391)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (391)
+...+.+.+......+-++...+..+
T Consensus 299 ~~~~k~Laf~a~~~ill~~~~~l~~g 324 (422)
T COG0738 299 IKPEKYLAFYALIAILLLLAVALIGG 324 (422)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99888887777666666665555555
No 82
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.93 E-value=2.2e-25 Score=192.08 Aligned_cols=321 Identities=19% Similarity=0.270 Sum_probs=218.5
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhcc-C------cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGF-N------GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR 118 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~------~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr 118 (391)
.++..+.+.+...+.+.+.++...++.+.|.+...+.- + ++.+ .+.+..+-.+|..+|+++.|++.||+|||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i-~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGV-LALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchH-HHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 45557778888999999999999999999988776522 2 1222 27889999999999999999999999999
Q ss_pred HHHHHhhHHHHHHHHHHHhhh-------hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHH
Q 016350 119 RAFQLCALPMIIGASISATTR-------NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM 191 (391)
Q Consensus 119 ~~l~~~~~~~~i~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 191 (391)
+++...++++.+++++++++. -..++...|++.|+|.|+-+|...++.+|...++.||...+.+-+..+.|.+
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 999999999999999887752 2568888999999999999999999999999999999988887766666666
Q ss_pred HHHHhccccc----ccc----------chhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCH-HHHHHHHHHHhCCCC
Q 016350 192 GSLLIGIPVK----EIA----------GWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRT-AEAEAEFEKLLGGSH 256 (391)
Q Consensus 192 ~~~~~~~~l~----~~~----------~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~ 256 (391)
.|.+++-.+. ... +-||..|.+..++.++.....+..||++++.....++ +.+. ++..+...
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k~~~ 271 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAA---GDMKKVLS 271 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhh---hccccccc
Confidence 5555543322 111 2399999999999999888889999998876332222 2211 11111111
Q ss_pred chhHHHHhhhcccCCCCccc---cchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCCh---hH-----
Q 016350 257 VKSSLAELSKLDRGDDGDIV---KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSS---GL----- 325 (391)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----- 325 (391)
. ...+....+...+.+.. .+...+..+.. ...+.....++..-...+....+...+++..+... .+
T Consensus 272 ~--~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg-~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~ 348 (538)
T KOG0252|consen 272 V--DIEAESTAESDVPPPSNSFGLFSRLFLRWHG-KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFK 348 (538)
T ss_pred c--ccchhhccccCCCCcccccchHHHHHHHHHH-HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHH
Confidence 1 01111111111111111 12223333322 33344444444444445556666666666333221 11
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhc
Q 016350 326 ----ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 373 (391)
Q Consensus 326 ----~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (391)
...+...+.++|..+..+++|++||++..+.+++++.+..+.+....+
T Consensus 349 vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~ 400 (538)
T KOG0252|consen 349 VAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYN 400 (538)
T ss_pred HHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcc
Confidence 122333444457777888999999999999999999999998887665
No 83
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.92 E-value=1e-23 Score=186.11 Aligned_cols=165 Identities=14% Similarity=0.079 Sum_probs=142.6
Q ss_pred hhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHH
Q 016350 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGML 145 (391)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~ 145 (391)
.+...+...|.+.+|+|++.++. .|.+.++++.+++++.++.|+++||+|.|+++..+.+.+++.+++.++++++..+.
T Consensus 41 ~R~n~s~a~p~L~~elglT~~qv-~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~ 119 (511)
T TIGR00806 41 FRPGESFITPYLLTVLNFTEETV-TNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQ 119 (511)
T ss_pred hhchHHHHHHHHHHHcCCCHHHh-cchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455678899999999998882 29999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH---HHHHHHHH
Q 016350 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS---IVPAAILC 222 (391)
Q Consensus 146 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~---~~~~~~~~ 222 (391)
+.|++.|++.|+.. +...++..|+|+++|+++.++...+..+|.++++++++.+ ...+ ||+.+.+. .....+.+
T Consensus 120 i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~g-Wr~y~~Ln~Isl~s~~~a~ 196 (511)
T TIGR00806 120 LMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLG-WISYSTLNIISLVFMTFSV 196 (511)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC-chhHHHHHHHHHHHHHHHH
Confidence 99999999999999 9999999999999999999999999999999999999984 4556 88766543 33333344
Q ss_pred HHhhccccchhH
Q 016350 223 LAMVFCAESPHW 234 (391)
Q Consensus 223 ~~~~~~~e~~~~ 234 (391)
+..+++|..++.
T Consensus 197 ~~a~~LP~~~~s 208 (511)
T TIGR00806 197 FLALFLKRPKRS 208 (511)
T ss_pred HHHHhCCCCchh
Confidence 455778865543
No 84
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.92 E-value=3.4e-23 Score=188.71 Aligned_cols=277 Identities=18% Similarity=0.117 Sum_probs=199.6
Q ss_pred HHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-----hhhH-HHHHhhHHHHHH
Q 016350 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-----GRRR-AFQLCALPMIIG 131 (391)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~-~l~~~~~~~~i~ 131 (391)
..++..+.........+|.+.++.|.+.+++ |++..+... .+..+++|+++||+ |||| .++.+.++.+++
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~i--g~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDIQTI--GFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 3456667777778889999999999998887 888766665 58999999999999 8875 788888888888
Q ss_pred HHHHHhh---hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc-cchh
Q 016350 132 ASISATT---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI-AGWW 207 (391)
Q Consensus 132 ~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~w 207 (391)
..+.++. ++++.+++..++.++..+...+...+++.|++|+|+|+++.++...+..+|.++++.++..+.+. .+ |
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g-w 160 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG-W 160 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-H
Confidence 8887776 35777888888888888888899999999999999999999999999999999999998888875 36 9
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccch
Q 016350 208 RICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
|..|++.++..++..+..++.||+++. ++++++..+ +...++++++++|.+
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~e~~~~---~~~~~~~~~--------------------------~~~~~~~~l~~~~~~ 211 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAPEPEVP---ARPPRSLGE--------------------------AVVGPLRDFFSRRGA 211 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccc---ccccchhHH--------------------------HHHHHHHHHHhCcCH
Confidence 999999887776665555667765431 100000000 011235567788888
Q ss_pred hHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHH-HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 016350 288 RVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 366 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (391)
+...+..++............+.+..+.++.+..+.+......+ ++.+++.++++++.||+++|+.+..+.....+..+
T Consensus 212 ~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l 291 (402)
T PRK11902 212 WALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNL 291 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 87666555544433322233334444434433333455544433 45789999999999999999887776666555544
Q ss_pred HH
Q 016350 367 IQ 368 (391)
Q Consensus 367 ~~ 368 (391)
.+
T Consensus 292 ~~ 293 (402)
T PRK11902 292 GY 293 (402)
T ss_pred HH
Confidence 33
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.92 E-value=7.2e-24 Score=217.24 Aligned_cols=287 Identities=13% Similarity=0.062 Sum_probs=203.2
Q ss_pred HHHHHHHHhhhhhhcccchH-HHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHH---hhHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPL-ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL---CALPMII 130 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~---~~~~~~i 130 (391)
..+++.+.+++....+.... ..+..+.+.+... ..++..+++.+++.++++++|+++||+|||+++.. +.+...+
T Consensus 19 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~ 97 (1140)
T PRK06814 19 TQFFGAFNDNFLKNALVILILYGLSGALGAYNNA-LVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAA 97 (1140)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHhccccccchHH-HHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHH
Confidence 33444444444443333332 3444444433222 34788899999999999999999999999997533 2233333
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHH
Q 016350 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (391)
Q Consensus 131 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 210 (391)
..+.+...+++++++++|+++|++.+...|+..+++.|++|+++|++++++.+++..+|.++||++++++.+..+ |++.
T Consensus 98 ~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-~~~~ 176 (1140)
T PRK06814 98 LAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-FVIL 176 (1140)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-cHHH
Confidence 333344458999999999999999999999999999999999999999999999999999999999999998888 9999
Q ss_pred HHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHH
Q 016350 211 FWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (391)
Q Consensus 211 f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (391)
|+..++..++.++..+++|+++... ++.+.+ ....+ +....++.+.+++.++..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~-----------------------~~~~~~~~~~~~~~~~~~ 230 (1140)
T PRK06814 177 VALLMGIAVLGWLASLFIPKTGNAA--PDLKID-RNIIR-----------------------STITLLKYAKADKRIWLA 230 (1140)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCC--CCCeec-cchHH-----------------------HHHHHHHHHhcCchHHHH
Confidence 9666565665556666676653210 000000 00000 001134556678888888
Q ss_pred HHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 016350 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (391)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (391)
.+..++..+.......+++.|+.+.++.+....+.+....+++.++|.++.|++.|+..+++.+..+.++.+++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (1140)
T PRK06814 231 ILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLA 309 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHH
Confidence 7777777666666667888888887777777788899999999999999999999888776666555555555444333
No 86
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.92 E-value=2.6e-23 Score=189.17 Aligned_cols=286 Identities=18% Similarity=0.147 Sum_probs=195.7
Q ss_pred HHHHHHHHHhhhhhhcccchHHHh-HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 54 LVATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+.+....++.........|.+|.+ .+++|.+..+. |++.+++.++..+++++.|+++||+|||+.++.+....+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~--g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 82 (396)
T TIGR00882 5 WMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDT--GIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF 82 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 344455666666667777888765 45689887777 999999999999999999999999999999988777665544
Q ss_pred HHH---Hhh-----hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc
Q 016350 133 SIS---ATT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (391)
Q Consensus 133 ~~~---~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (391)
... .+. +.+..+++.|++.|++.+...+....+..|.. +++++..+......++|..++|.+++.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~- 159 (396)
T TIGR00882 83 APFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFSI- 159 (396)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhcc-
Confidence 332 111 22344567789999988888888877777753 3345677777788889999999999987664
Q ss_pred chhHHHHHHHHHHHHHHHHHhhcc-ccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccc
Q 016350 205 GWWRICFWVSIVPAAILCLAMVFC-AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLY 283 (391)
Q Consensus 205 ~~w~~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (391)
+ ||..|++.++..++..+..+.. +|+|+. ++..+.. + .+.++.+..+..++++
T Consensus 160 ~-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----------------~-~~~~~~~~~~~~~~l~ 213 (396)
T TIGR00882 160 D-PQIVFWLGSGFALILMLLLMFAKPKAPSS-------ATVANAL-----------------G-ANASAFSLKLALELFR 213 (396)
T ss_pred C-chHHHHHHHHHHHHHHHHHHHhCCCCchh-------hhhhccc-----------------c-cccCCCCHHHHHHHHc
Confidence 5 9999999887777765555443 333210 0000000 0 0011112234667888
Q ss_pred ccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCC---ChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHH
Q 016350 284 GRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (391)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 360 (391)
+|.++...+..+...........+.+.|.++.++..+. ..+.......+...++.+..+++.||+++|+.+.++..+
T Consensus 214 ~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l 293 (396)
T TIGR00882 214 QRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTI 293 (396)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 88887665554444433333344567777766532222 245667777788888999999999999999999888887
Q ss_pred HHHHHHHHHH
Q 016350 361 MAVSMAIQVA 370 (391)
Q Consensus 361 ~~~~~~~~~~ 370 (391)
.++...+...
T Consensus 294 ~~l~~~~~~~ 303 (396)
T TIGR00882 294 MSVRIIGSSF 303 (396)
T ss_pred HHHHHHHHHh
Confidence 7776666554
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=6.3e-23 Score=189.66 Aligned_cols=308 Identities=12% Similarity=0.115 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHhhhhhhcccch-HHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHhhHHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEP-LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPM 128 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~ 128 (391)
+.+..+++..+...+......+. ...+.+++|++.++. +++.+.+.....+..+++|+++|| +|||++++.+.+++
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a--~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~ 91 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQA--FITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVL 91 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHH
Confidence 34555555555555555544444 456677899987777 799999998888889999999999 99999999999999
Q ss_pred HHHHHHHHhhhhHHH-HHHHHHHhhhccchhhHHHHHHHhhcCCcc--ccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 129 IIGASISATTRNLIG-MLLGRFVVGTGMGLGPTVAALYVTEVSPPF--VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~-l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
+++++.++++++... ++++|+++|+|.|...+...++++|.+|++ +|+++.++++.+.++|..++|.+++++.+..|
T Consensus 92 ~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g 171 (489)
T PRK10207 92 AIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG 171 (489)
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999876554 457899999999999999999999999877 45779999999999999999999999999888
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccccchhHHH--HcCCHHHHHHHHH-------------HHhCCCCchhHH-H-------
Q 016350 206 WWRICFWVSIVPAAILCLAMVFCAESPHWLY--KKGRTAEAEAEFE-------------KLLGGSHVKSSL-A------- 262 (391)
Q Consensus 206 ~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~~~~~~~-------------~~~~~~~~~~~~-~------- 262 (391)
||+.|++.++..++.++.+.+.++..+... .++++.+...... ............ .
T Consensus 172 -w~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 250 (489)
T PRK10207 172 -YSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVT 250 (489)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 999999865544433333333332211000 0011111111100 000000000000 0
Q ss_pred -HhhhcccCCCCccccchhcccccchhHHHH--HHHHHHHHhhhchhhHHHhHHHHHhhc--CC--ChhHHHHHHHHHHH
Q 016350 263 -ELSKLDRGDDGDIVKFEELLYGRHFRVVFI--GSTLFALQQLSGINAIFYFSSSVFKSA--GL--SSGLANVFVGIANL 335 (391)
Q Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~ 335 (391)
.....+.+ . .+.+|+|.+....+ ...++........+.++.|.++..+.. +. .+........+..+
T Consensus 251 ~~f~~~~~~-~------~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~ii 323 (489)
T PRK10207 251 IIFFREAFK-L------DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVV 323 (489)
T ss_pred HHHHHHHhc-C------CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHH
Confidence 00000000 0 13455555443322 233344444444466777776533332 11 22334444556666
Q ss_pred HHHHHHHHHHhhhCchH-------HHHHHHHHHHHHHHHH
Q 016350 336 LGSVVAMVLMDKLGRKA-------LLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 336 ~~~~~~g~l~d~~~~~~-------~~~~~~~~~~~~~~~~ 368 (391)
+..++.+++.||+++|+ .+.+|+++.+++++.+
T Consensus 324 i~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~ 363 (489)
T PRK10207 324 VASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTA 363 (489)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 77788899999999886 3667777777776544
No 88
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=9.8e-23 Score=186.82 Aligned_cols=288 Identities=18% Similarity=0.116 Sum_probs=181.7
Q ss_pred HHHHHHHhhhhhhcccchHHHh-HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHH
Q 016350 56 ATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 134 (391)
+....+..........+.+|.+ .+++|++..+. |++.+++.++..++++++|+++||+|||++++.+..+.+++...
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~--g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~ 92 (420)
T PRK09528 15 FSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDT--GIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGP 92 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 3344555555555566777655 44599988777 99999999999999999999999999999998876665554332
Q ss_pred HH---hhh-----hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch
Q 016350 135 SA---TTR-----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (391)
Q Consensus 135 ~~---~~~-----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (391)
.. .++ .....++++++.|.+.....+....+..+ . .+++++..+.......+|..++|.+++.+.+. +
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~- 168 (420)
T PRK09528 93 FFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-N- 168 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-C-
Confidence 21 111 11122334444444444433333333322 2 34577888888888999999999999988764 5
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccc
Q 016350 207 WRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH 286 (391)
Q Consensus 207 w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (391)
|++.|++.++..++..+..++.+++++.... +.++.. ++++.....+..+.+++|.
T Consensus 169 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----------------------~~~~~~~~~~~~~~l~~~~ 224 (420)
T PRK09528 169 PQINFWLGSGSALILLVLLFFAKPDAPSTAK--VANALG----------------------ANASAVSLKDALALLKLPK 224 (420)
T ss_pred chHhHHHHHHHHHHHHHHHhcccccccchhh--hccchh----------------------cccccccHHHHHHHccCCC
Confidence 8999998887777666555554333211000 000000 0000111123445677787
Q ss_pred hhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCC---ChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 016350 287 FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGL---SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (391)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (391)
++...+................+.|..+.++..+. ..+.......++..++.++.|++.||+++|+.+..+..+..+
T Consensus 225 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~ 304 (420)
T PRK09528 225 FWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAV 304 (420)
T ss_pred eEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHH
Confidence 76555444333333333334566676665543332 245677777888889999999999999999998888888888
Q ss_pred HHHHHHHHhc
Q 016350 364 SMAIQVAASS 373 (391)
Q Consensus 364 ~~~~~~~~~~ 373 (391)
+.+++.+..+
T Consensus 305 ~~~l~~~~~~ 314 (420)
T PRK09528 305 RIIGSGFATG 314 (420)
T ss_pred HHHHHHhccc
Confidence 7777665443
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.90 E-value=3.5e-23 Score=174.47 Aligned_cols=140 Identities=24% Similarity=0.273 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhc
Q 016350 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (391)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 169 (391)
.|.+.+.|.++..+.++.+|.++||+|||+++++|++..++...+.+.+.|+..++++|++.|+..|-.. ...++++|.
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~-v~rAiisdV 148 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLS-VIRAIISDV 148 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchH-HHHHHHHhh
Confidence 4899999999999999999999999999999999999999999999999999777777999999888876 667899999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHhcccccc---ccchhHHHHHH----HHHHHHH-HHHHhhccccch
Q 016350 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE---IAGWWRICFWV----SIVPAAI-LCLAMVFCAESP 232 (391)
Q Consensus 170 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~w~~~f~~----~~~~~~~-~~~~~~~~~e~~ 232 (391)
+++|+|+++++.++..+++|.++||.+|+++.+ ..+ +.+|.. ..+.... .....+++||+-
T Consensus 149 ~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g--~~p~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 149 VSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG--SYPFALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred cChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc--cCchHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999999999999999999999999987 333 222222 2222222 334457789984
No 90
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.90 E-value=5.5e-23 Score=188.63 Aligned_cols=320 Identities=15% Similarity=0.104 Sum_probs=226.8
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
-+.|...+...+......-.....+...+.++++++.+.++. +|+.++..-...+..++.+.+.||+|.|++.+.|.+
T Consensus 42 G~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~--~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 42 GWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQI--AWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHH--HHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 334545555545544444444455678999999999988876 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHH-HHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 127 PMIIGASISATTRNLIGMLLG-RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 127 ~~~i~~~~~~~~~~~~~l~~~-r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
+.+++.++.+++++++++++. -++.|+|.|..+.....++..+| +|+|+.+.|+...+.++|.++-|.+...+.+..|
T Consensus 120 v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G 198 (509)
T KOG2504|consen 120 VAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence 999999999999999988885 79999999999999988899877 5779999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcccc-chhHHHHcCCHHHHHHHHH------------HH-hCCCCch----hHHHHhhhc
Q 016350 206 WWRICFWVSIVPAAILCLAMVFCAE-SPHWLYKKGRTAEAEAEFE------------KL-LGGSHVK----SSLAELSKL 267 (391)
Q Consensus 206 ~w~~~f~~~~~~~~~~~~~~~~~~e-~~~~~~~~~~~~~~~~~~~------------~~-~~~~~~~----~~~~~~~~~ 267 (391)
||+.+++.+.+.+-..+....+.+ +++.... .++..+... .. ....... .......+.
T Consensus 199 -~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (509)
T KOG2504|consen 199 -WRGALLIFGGISLNVLVAGALLRPLSPPKKPN---EEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRG 274 (509)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch---hhhhhccccccccccccccccccccCCCCCCcccccchhhhhhC
Confidence 999998877777665555444333 3221000 000000000 00 0000000 000111111
Q ss_pred ccCCC--Cccc-c---chhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHH
Q 016350 268 DRGDD--GDIV-K---FEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVA 341 (391)
Q Consensus 268 ~~~~~--~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (391)
+++.. ..+. . ..++++++.++...+...+.....+.....++.|.. ..+....+.+......++...+++++.
T Consensus 275 ~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~ 353 (509)
T KOG2504|consen 275 PDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIIL 353 (509)
T ss_pred CccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhh
Confidence 11111 1111 1 257889998888888887777777666666666665 345555667889999999999999999
Q ss_pred HHHHhhhCc--hHHHHHHHHHHHHHHHHHHHHhcc
Q 016350 342 MVLMDKLGR--KALLQWSFFSMAVSMAIQVAASSS 374 (391)
Q Consensus 342 g~l~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 374 (391)
|++.|+... +....++.+..+++.+...+..+.
T Consensus 354 G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~ 388 (509)
T KOG2504|consen 354 GLLADKPGIRALVLFLLTLLIAGLARLFLPFATTY 388 (509)
T ss_pred hhhcCccccchHHHHHHHHHHHHHHHHHHHHhccH
Confidence 999999873 444555666666666555555544
No 91
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=5.7e-21 Score=176.79 Aligned_cols=150 Identities=17% Similarity=0.078 Sum_probs=124.0
Q ss_pred cccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh------hhHH
Q 016350 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT------RNLI 142 (391)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~------~~~~ 142 (391)
..+...|.+.+++|++.++. +++.++. ....+++++.|++.||+|||++++++.++++++.++++++ ++++
T Consensus 45 ~fsv~s~~L~~~lgls~~~l--~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~ 121 (591)
T PTZ00207 45 AFNLISGAMQARYNLTQRDL--STITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVV 121 (591)
T ss_pred HHHHHHHHHHHHhCcCHHHH--HHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHH
Confidence 34567789999999988776 7777763 4455678889999999999999999999999999999997 6899
Q ss_pred HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHH-HHHhccccccccchhHHHHHHHHHHHHHH
Q 016350 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMG-SLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (391)
Q Consensus 143 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-~~~~~~~l~~~~~~w~~~f~~~~~~~~~~ 221 (391)
.+++.|+++|+|.+...+.....+.+|+| ++||++.|+...+.++|..+ +++..+.+. .+ |+..|++.++..++.
T Consensus 122 ~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~-~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 122 RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DN-TSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-HHHHHHHHHHHHHHH
Confidence 99999999999999999899999999996 77999999999999999864 555555544 23 788777776666665
Q ss_pred HHHh
Q 016350 222 CLAM 225 (391)
Q Consensus 222 ~~~~ 225 (391)
.++.
T Consensus 198 ~ll~ 201 (591)
T PTZ00207 198 GILA 201 (591)
T ss_pred HHHH
Confidence 4444
No 92
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.89 E-value=2.3e-21 Score=176.81 Aligned_cols=277 Identities=13% Similarity=0.067 Sum_probs=184.0
Q ss_pred HHHHHHHhhhhhhcc-cchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh-hHHHHHhhHHHHHHHH
Q 016350 56 ATLSSFLFGYHLGVV-NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMIIGAS 133 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~ 133 (391)
+++..+......... ++..+.+.+++|++.++. |++.+++.++..++++++|+++||+|| |+++.++.++.+++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~i--Gl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEI--GWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 344455555555555 445566777899988777 999999999999999999999999965 7888888888888888
Q ss_pred HHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHh--------hcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT--------EVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 134 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
+..+.++++.+++.|++.|++.+...+...++.. |......|.+..| .+|..+++.+++.+.....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~ 158 (418)
T TIGR00889 85 FAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELS 158 (418)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccch
Confidence 8899999999999999999987777666555432 2232334555555 3567777777776633333
Q ss_pred hhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhccccc
Q 016350 206 WWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGR 285 (391)
Q Consensus 206 ~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (391)
|+. |++.++..++..+..+++||+|+. ++++++..+ +....+.++++|+|
T Consensus 159 -~~~-f~~~~~~~~~~~~~~~~~~e~~~~---~~~~~~~~~-------------------------~~~~~~~~~~~k~~ 208 (418)
T TIGR00889 159 -NIQ-LYITAGSSALLGVFALTLPDIPVA---KSTAKMSIK-------------------------VMLGLDAFILFKNK 208 (418)
T ss_pred -hHH-HHHHHHHHHHHHHHHhcCCCCCCC---ccccccCHH-------------------------HHhhhhHHHHhcCC
Confidence 554 445555455554555677876521 110000000 00011234567778
Q ss_pred chhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcC--------CChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHH
Q 016350 286 HFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAG--------LSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWS 357 (391)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 357 (391)
.++...+..++............+.|..+. +.+. ...+.......+..+++.+..+++.||+|+|+++.++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~ 287 (418)
T TIGR00889 209 RMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLS 287 (418)
T ss_pred CeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 777666665555443333333344444432 2111 2346777888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 016350 358 FFSMAVSMAIQVAA 371 (391)
Q Consensus 358 ~~~~~~~~~~~~~~ 371 (391)
.++..++..++...
T Consensus 288 ~~~~~v~~~l~~~~ 301 (418)
T TIGR00889 288 LVAWALRFGFFAYG 301 (418)
T ss_pred HHHHHHHHHHHHHc
Confidence 98888877666653
No 93
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.89 E-value=1.5e-20 Score=158.27 Aligned_cols=285 Identities=16% Similarity=0.146 Sum_probs=231.1
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+..+.+..+----..+.++|.++++.+|+|+|.+.. |+++++..+...+.+++..++..|+|.++.+..++++.+++.
T Consensus 14 i~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~a--GlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~ 91 (395)
T COG2807 14 LAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVA--GLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGI 91 (395)
T ss_pred HHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 333333344444556778999999999999998888 999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH
Q 016350 133 SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFW 212 (391)
Q Consensus 133 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~ 212 (391)
++-... +...++.+-.+.|.|.+...+..+.++.+.||+ +-+..+|++....++|..+++.+...+.++.++||....
T Consensus 92 ~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~ 169 (395)
T COG2807 92 LIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALG 169 (395)
T ss_pred HHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHH
Confidence 999887 778889999999999999999999999999974 589999999999999999999999988888755999999
Q ss_pred HHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHH
Q 016350 213 VSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
+-+.++++.++.++.-... ++. ...+.+..+..+++++|.-|.+.+
T Consensus 170 ~WAl~allAl~~WlPq~~r-------~~~---------------------------~~~~~~~~~~~~vw~~~~aW~vtL 215 (395)
T COG2807 170 FWALLALLALLIWLPQALR-------EQA---------------------------ASIATKLVSVRKVWRSPLAWQVTL 215 (395)
T ss_pred HHHHHHHHHHHHHhhhccc-------ccc---------------------------cccccccccccccccCchhHHHHH
Confidence 9999888888777532211 000 011112233455889999998888
Q ss_pred HHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh-CchHHHHHHHHHHHHHHHHHHHH
Q 016350 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
...+..+..++...|+|.++.+ .+.+..++|.+.....+..++.++....+.+|. ++|+........+.++.+.+.+.
T Consensus 216 fmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~ 294 (395)
T COG2807 216 FMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA 294 (395)
T ss_pred HHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 8888888877777777777665 366666788899999999999999999999975 56777777888888888887766
Q ss_pred hccCC
Q 016350 372 SSSYI 376 (391)
Q Consensus 372 ~~~~~ 376 (391)
+....
T Consensus 295 P~~~~ 299 (395)
T COG2807 295 PGQLP 299 (395)
T ss_pred hhhHH
Confidence 65543
No 94
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.89 E-value=4.7e-21 Score=177.19 Aligned_cols=172 Identities=15% Similarity=0.159 Sum_probs=146.7
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHh-h--hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHhhHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISL-D--LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPM 128 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~-~--~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~ 128 (391)
+..+.+..+...+......+.+|.+.+ + +|++..+. +++.+.+.++..++++++|+++|| +|||++++.+.++.
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~a--g~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~ 89 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQA--FIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVL 89 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHH--HHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHH
Confidence 445555666666776666777776654 4 78887776 899999999999999999999999 89999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccc---cchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV---RGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
+++.++.+++++++.++++|++.|+|.|...+...++++|++|+++ |+++.++.+.+.++|..+||.+++.+.+..+
T Consensus 90 ~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 90 MLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999998754 8889999999999999999999999988878
Q ss_pred hhHHHHHHHHHHHHHHHHHhhc
Q 016350 206 WWRICFWVSIVPAAILCLAMVF 227 (391)
Q Consensus 206 ~w~~~f~~~~~~~~~~~~~~~~ 227 (391)
|++.|.+.++..++..+.+++
T Consensus 170 -~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 170 -YHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred -hHHHHHHHHHHHHHHHHHHHH
Confidence 999999877655544444333
No 95
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.87 E-value=1.3e-20 Score=173.88 Aligned_cols=293 Identities=18% Similarity=0.161 Sum_probs=216.9
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
.+..++.+.++..++..+....++-+..+.. .+....+++..+..+...+.++++|.++||+.||++++.+.++.++.
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt--~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVTQLT--GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALV 88 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHH
Confidence 3445566777777777777777777766654 45555599999999999999999999999999999999998887766
Q ss_pred HHHHHhh-----hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch
Q 016350 132 ASISATT-----RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW 206 (391)
Q Consensus 132 ~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 206 (391)
.+..++. .+.+.+++.-++.|++.+...|+..+++.|..|+++...+.++.+...++..++||.+||.+....|
T Consensus 89 ~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G- 167 (524)
T PF05977_consen 89 ALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFG- 167 (524)
T ss_pred HHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHH-
Confidence 5554432 4678899999999999999999999999999999999999999999999999999999999998887
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccc
Q 016350 207 WRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRH 286 (391)
Q Consensus 207 w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (391)
-.+.|.+.++..++.++.....+++++ .+..++| +..+. -...++-+.++|.
T Consensus 168 ~~~~f~inalsfl~~i~~l~~~~~~~~---~~~~~~e--~~~~~-----------------------l~~G~ryv~~~~~ 219 (524)
T PF05977_consen 168 AAAAFLINALSFLISILALLRWKPPPP---PSSLPRE--RFFSA-----------------------LREGLRYVRSSPP 219 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccc---ccccchh--hhhhh-----------------------HHHHHHHHhcchH
Confidence 578888877665554444433332211 0111111 00000 0111222344566
Q ss_pred hhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 016350 287 FRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 366 (391)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (391)
.+..+...+++.+........+|.+..+.++......|++....+++.++|.++.+++.+|+++++++..+.+..+++++
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~ 299 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALL 299 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHH
Confidence 66555545554444444445677777777777777788899999999999999999999999998888888888888887
Q ss_pred HHHHHhccC
Q 016350 367 IQVAASSSY 375 (391)
Q Consensus 367 ~~~~~~~~~ 375 (391)
.+.+.++.+
T Consensus 300 ~lal~~~~~ 308 (524)
T PF05977_consen 300 LLALSPSFW 308 (524)
T ss_pred HHhcchHHH
Confidence 777765543
No 96
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=2.7e-21 Score=178.53 Aligned_cols=267 Identities=17% Similarity=0.151 Sum_probs=188.6
Q ss_pred hHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc----chhh-HHHHHhhHHHHHHHHHHHhhhh------H
Q 016350 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRR-RAFQLCALPMIIGASISATTRN------L 141 (391)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~i~~~~~~~~~~------~ 141 (391)
..+.+.+++|+++.+. |++.++..+..++..|+.|+++|| +||| +.++.+....+++.+++...++ .
T Consensus 22 l~~~~~~~~g~s~~~~--g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~ 99 (437)
T TIGR00792 22 LLFFYTDVLGLSAAFV--GTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKL 99 (437)
T ss_pred HHHHHHHccCCCHHHH--HHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHH
Confidence 4566777899988777 999999999999999999999997 7874 4677788888888887776653 4
Q ss_pred HHHHHHHHHhhhccchhhHHHHHHHhhcC-CccccchHHHHHHHHHHHHHHHHHHhccccc-------cccchhHHHHHH
Q 016350 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-------EIAGWWRICFWV 213 (391)
Q Consensus 142 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-------~~~~~w~~~f~~ 213 (391)
..+++.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+. +..+ ||+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g-~~~~~~i 178 (437)
T TIGR00792 100 VYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFG-WFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccc-HHHHHHH
Confidence 56677888889888887777778888887 4688999999988888888766655544333 2335 9999988
Q ss_pred HHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHH
Q 016350 214 SIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (391)
Q Consensus 214 ~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
.+++.++..+.. ++.+|+++ + ++++ ++++......+++++++|.++...+
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~~----~-~~~~------------------------~~~~~~~~~~~~~l~~~~~~~~~~~ 229 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERYS----E-IPKN------------------------IEKKLSLKQIFKALFKNDQLLILCL 229 (437)
T ss_pred HHHHHHHHHHHHHcCCEecCC----C-CCcc------------------------cccCCCHHHHHHHHhCCHHHHHHHH
Confidence 887777665544 55666531 0 0000 0000011223556778888887776
Q ss_pred HHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
..++............++|.+..++ .....+.......++.+++.++.+++.||+|+|+.+.++..+.+++.+.+.+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 308 (437)
T TIGR00792 230 AYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG 308 (437)
T ss_pred HHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc
Confidence 6666655554433444455544333 222345566667888999999999999999999999988888888777666543
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.85 E-value=4.2e-19 Score=161.28 Aligned_cols=276 Identities=13% Similarity=0.021 Sum_probs=189.7
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHH--HHHHHHHHHHHHHHH-HHhhhcchhhHHHHHhhHHH-
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLV--VSMCLGGAFIGSTLS-GWIADGVGRRRAFQLCALPM- 128 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~s~~~~~~~i~~~~~-g~l~dr~Grr~~l~~~~~~~- 128 (391)
...+...++..+.......|.+|.+.+|.|.+.+++ |++ .+++.+...+.++++ ++..||+||||.+++...+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~i--Gl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTAL--AFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 445666778888888999999999999999988877 886 355667777777777 44789999999876655332
Q ss_pred HHHHHHHH---hhhh-HHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc
Q 016350 129 IIGASISA---TTRN-LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (391)
Q Consensus 129 ~i~~~~~~---~~~~-~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (391)
++.....+ ...+ ..+++..-++.++..+...+....+..|..++++++...+....+..+|.++++...+.+.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~ 160 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKF 160 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222222 2222 3344445555666677777777888888888888888888888888999999998888888888
Q ss_pred chhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccc
Q 016350 205 GWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYG 284 (391)
Q Consensus 205 ~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (391)
+ ||..|++.++..++..+..++.+|+++. +++.++ ....+.++++|+
T Consensus 161 g-w~~~f~~~a~l~~~~~~~~~~~~~~~~~---~~~~~~-----------------------------~~~~~~~~~l~~ 207 (390)
T TIGR02718 161 G-QRPAFLLVACVPLASLVCVLWLKDRAVA---SPEAPL-----------------------------ARRASLFRFFRR 207 (390)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHcCCCCcC---ccccch-----------------------------hhHHHHHHHHcC
Confidence 8 9999999888777665555555443210 000000 001124567777
Q ss_pred cchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHH-HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 016350 285 RHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVG-IANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (391)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (391)
|..+......++........+.+.+.|..+ .+.+..+.+......+ ...+++.++.|++.||+++|+.+..+..+..+
T Consensus 208 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 208 PLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGS 286 (390)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 887777666666666555555666666655 3444444566555554 45667789999999999999988877665533
Q ss_pred H
Q 016350 364 S 364 (391)
Q Consensus 364 ~ 364 (391)
.
T Consensus 287 ~ 287 (390)
T TIGR02718 287 L 287 (390)
T ss_pred H
Confidence 3
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.84 E-value=7.4e-19 Score=163.57 Aligned_cols=166 Identities=16% Similarity=0.162 Sum_probs=131.4
Q ss_pred HHHHHHHHHHhhhhhhcccchHH-HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHhhHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMII 130 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i 130 (391)
+..+++..+...+......+.++ .+.+++|++.++. +++.+.+........+++|+++|| +|||++++.+.++.++
T Consensus 23 ~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a--~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~i 100 (500)
T PRK09584 23 FYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADS--ITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAI 100 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 33444455555555444445544 5568899987776 677777766666667889999999 5999999999999999
Q ss_pred HHHHHHhhh-hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccc--cchHHHHHHHHHHHHHHHHHHhccccccccchh
Q 016350 131 GASISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFV--RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (391)
Q Consensus 131 ~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (391)
+..++++++ +...+.++|+++|++.|...+...+++.|++|+++ |..+.++++.+.++|..++|.+++++.+..| |
T Consensus 101 g~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g-~ 179 (500)
T PRK09584 101 GYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG-W 179 (500)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC-H
Confidence 999998875 56667788999999999988888899999998654 4567888999999999999999999998888 9
Q ss_pred HHHHHHHHHHHHHH
Q 016350 208 RICFWVSIVPAAIL 221 (391)
Q Consensus 208 ~~~f~~~~~~~~~~ 221 (391)
|+.|.+.++..++.
T Consensus 180 ~~~F~i~~i~~~i~ 193 (500)
T PRK09584 180 SVAFALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999877544443
No 99
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=3.6e-18 Score=147.98 Aligned_cols=288 Identities=16% Similarity=0.120 Sum_probs=206.7
Q ss_pred CCcchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHH
Q 016350 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL 123 (391)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 123 (391)
+..+++|..+++.++..+.+.+.+..+++........|+ +.+.. -|+.-+|++.+....+++-|+.|++|-|..+++
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~--~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAA--DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHH--HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 456777888888888888999999888999888999999 44444 599999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhh------hHH--HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHH
Q 016350 124 CALPMIIGASISATTR------NLI--GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (391)
Q Consensus 124 ~~~~~~i~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 195 (391)
+..+.++|..+-..+. .++ ....+..+.+.+.-........+..-||++++|..+..+-.+++.+|..++.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 9999999999877652 344 66678888888777776666677888999999999999999999999999999
Q ss_pred hcccccccc----c-hhHH--HHHHHHHHHHH-HHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhc
Q 016350 196 IGIPVKEIA----G-WWRI--CFWVSIVPAAI-LCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKL 267 (391)
Q Consensus 196 ~~~~l~~~~----~-~w~~--~f~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (391)
+.+.+..+. + .|.. .|+.......+ .....+..++.|+.... .+....
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps-----~s~~~~------------------- 250 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPS-----ASQAAL------------------- 250 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc-----hhHhhh-------------------
Confidence 998887655 1 1544 34433333333 22233444444321100 000000
Q ss_pred ccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHH---hhcCCChhHHHHHHHHHHHHHHHHHHHH
Q 016350 268 DRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVF---KSAGLSSGLANVFVGIANLLGSVVAMVL 344 (391)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~l 344 (391)
. +.+-..+.++.++++++....+++........+ ++..+...+ ++.+..+|+......++++++++++|.+
T Consensus 251 -~-~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~----l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii 324 (480)
T KOG2563|consen 251 -Q-DASFPKSIKSCFKNRQFIILAICYGIGLGLFNS----LSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGII 324 (480)
T ss_pred -h-cCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHH----HHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhh
Confidence 0 112345677788999988777666555544433 333333222 4455678999999999999999999999
Q ss_pred HhhhCc-hHHHHHHHHHHHHH
Q 016350 345 MDKLGR-KALLQWSFFSMAVS 364 (391)
Q Consensus 345 ~d~~~~-~~~~~~~~~~~~~~ 364 (391)
.||.+. |.+..+......++
T Consensus 325 ~Dktk~fk~~~~v~~~~~~v~ 345 (480)
T KOG2563|consen 325 ADKTKKFKLTTLVLYLFALVG 345 (480)
T ss_pred hhhhhhHHHHHHHHHHHHHHH
Confidence 999876 44555555555555
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.80 E-value=1.6e-17 Score=150.90 Aligned_cols=294 Identities=15% Similarity=0.165 Sum_probs=193.2
Q ss_pred HHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhh----cchhhHHHHHh-hHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAFQLC-ALPMI 129 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~l~~~-~~~~~ 129 (391)
.++...+-..+......+.++.+.+++|.+.... +++..+..+...+.+++.|+++| |+|||+.++.+ .....
T Consensus 8 ~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~--~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~ 85 (477)
T TIGR01301 8 RVASVAAGVQFGWALQLSLLTPYVQELGIPHAWA--SIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHH
Confidence 4444444445666667777888889999987666 89999999999999999999999 59999998875 66666
Q ss_pred HHHHHHHhhhhHH-----------------HHHHHHHHhhhccchhhHHHHHHHhhcCCcccc--chHHHHHHHHHHHHH
Q 016350 130 IGASISATTRNLI-----------------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVR--GTYGAFIQIATCLGL 190 (391)
Q Consensus 130 i~~~~~~~~~~~~-----------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~ 190 (391)
++.++.+++++.. .++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.
T Consensus 86 ~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 86 FAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 6667777776643 223333344557777888889999999998865 579999999999999
Q ss_pred HHHHHhcccc--cccc------------chhHHHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCC
Q 016350 191 MGSLLIGIPV--KEIA------------GWWRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGS 255 (391)
Q Consensus 191 ~~~~~~~~~l--~~~~------------~~w~~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (391)
++|+.+++.. .+.. .+.|..|++.++..++..+.. +..+|.|... +++.++ ++.++
T Consensus 166 ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~--~~~~~----- 236 (477)
T TIGR01301 166 VLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFIN--SEAAP----- 236 (477)
T ss_pred HHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchh--hhccc-----
Confidence 9999998764 1110 136889999887777765544 6678865311 110000 00000
Q ss_pred CchhHHHHhhhcccCCCCccccchhcc----c-ccchhHHHHHHHHHHHHhhhchhhHHHhHH-HHHhhcCC-----Ch-
Q 016350 256 HVKSSLAELSKLDRGDDGDIVKFEELL----Y-GRHFRVVFIGSTLFALQQLSGINAIFYFSS-SVFKSAGL-----SS- 323 (391)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~- 323 (391)
.++......+++++ + .|.++.+.+..++.++..+....+.+.|.. ++++..+. +.
T Consensus 237 -------------~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~g 303 (477)
T TIGR01301 237 -------------PSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDG 303 (477)
T ss_pred -------------ccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHH
Confidence 00000001112222 1 356777777777777777666555555554 34443221 11
Q ss_pred ---h-HHHHHHHHHHHHHHHHHHHHHhhhCc-hHHHHHHHHHHHHHHHHHHHHh
Q 016350 324 ---G-LANVFVGIANLLGSVVAMVLMDKLGR-KALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 324 ---~-~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
| +......+...+.+++-.++.+|+|+ |.+..++.++.++++....+..
T Consensus 304 vr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~ 357 (477)
T TIGR01301 304 VRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVT 357 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 1 24445566666777888889999985 6666888888888877776554
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.79 E-value=1.4e-16 Score=145.44 Aligned_cols=169 Identities=18% Similarity=0.161 Sum_probs=128.7
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHh-HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhhHHHHHhhHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMII 130 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~i 130 (391)
+..++...+...+........+|.+ .+++|++.++. +.+.+.+.....++++++|+++||+ |||++++.+.++.++
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a--~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~l 88 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHA--YELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAI 88 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHH
Confidence 3344444444454444455556644 56689887777 7889999999999999999999999 999999999999999
Q ss_pred HHHHHHhhh-hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCcc--ccchHHHHHHHHHHHHHHHHHHhccccccccchh
Q 016350 131 GASISATTR-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF--VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (391)
Q Consensus 131 ~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (391)
+.++.+..+ +...+.++..+.++|.|...+...++++|.+|++ +|..+.++.+.+.++|..++|.+.+++.+..| |
T Consensus 89 g~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G-w 167 (493)
T PRK15462 89 GHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS-W 167 (493)
T ss_pred HHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhC-h
Confidence 988776543 2233444444555666776677778999999875 69999999999999999999999999988888 9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 016350 208 RICFWVSIVPAAILCLA 224 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~~ 224 (391)
++.|.+.++..++.++.
T Consensus 168 ~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 168 AMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999876544443333
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=1e-18 Score=141.73 Aligned_cols=309 Identities=17% Similarity=0.099 Sum_probs=214.4
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHh
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLC 124 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~ 124 (391)
..++...++..|+..|-.++..........++..|.+++.++. .++.++|.....+.+++.|++.|| +|-|..-++-
T Consensus 39 l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akf--tLlYsvYSwPNvVlcffgGflidr~fgir~gtii~ 116 (459)
T KOG4686|consen 39 LGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKF--TLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIIL 116 (459)
T ss_pred hhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeee--eeeeeeccCCCEEEeeecceeehhhhhhhHHHHHH
Confidence 3444555666666677777777777888889999999988777 799999999999999999999996 8888776666
Q ss_pred hHHHHHHHHHHH---hhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc
Q 016350 125 ALPMIIGASISA---TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 125 ~~~~~i~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (391)
+....+|.++.+ ..+.+|++..+|++.|+|.-...++...+..-||..|+-+.++|+......+|..+.-.+.+++.
T Consensus 117 ~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly 196 (459)
T KOG4686|consen 117 CIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLY 196 (459)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHH
Confidence 666677777664 46899999999999999999999999999999999999999999999999999887777777666
Q ss_pred cccchh-----HHHHHH-------HHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhccc
Q 016350 202 EIAGWW-----RICFWV-------SIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDR 269 (391)
Q Consensus 202 ~~~~~w-----~~~f~~-------~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (391)
+..+.. +....+ .....++++...-+. .+.+++.+++ ++
T Consensus 197 ~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~------------D~rAerilh~-----------------e~ 247 (459)
T KOG4686|consen 197 DTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLS------------DDRAERILHL-----------------EE 247 (459)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh------------hhHHHHHHhh-----------------hc
Confidence 543310 000000 111111111111000 0111111111 11
Q ss_pred CCCCccccchhcc-cccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 016350 270 GDDGDIVKFEELL-YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL 348 (391)
Q Consensus 270 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (391)
....+..+..+.. ..+.+|.+.+.++++....+-.+..-+.+.++.++.++.+++.+.+.......+.+++.|.++||+
T Consensus 248 g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~ 327 (459)
T KOG4686|consen 248 GFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY 327 (459)
T ss_pred CcccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh
Confidence 1111111111111 237889999999999888888888888999999999999999888888888889999999999999
Q ss_pred CchHHHHHHHHHHHH-HHHHHHHHhccCCCCchHhHHhhh
Q 016350 349 GRKALLQWSFFSMAV-SMAIQVAASSSYIPGSASLYLSVG 387 (391)
Q Consensus 349 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
|++.+.+.+..+..+ +-..+.+. ..+.+..+.++++.
T Consensus 328 G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLs 365 (459)
T KOG4686|consen 328 GFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLS 365 (459)
T ss_pred cceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhh
Confidence 998777665554444 33333332 23344555555543
No 103
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.78 E-value=6.1e-18 Score=155.40 Aligned_cols=269 Identities=16% Similarity=0.182 Sum_probs=203.7
Q ss_pred chHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhh----cchhhHHHH-HhhHHHHHHHHHHHhh-h------
Q 016350 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGRRRAFQ-LCALPMIIGASISATT-R------ 139 (391)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~l~-~~~~~~~i~~~~~~~~-~------ 139 (391)
...+.+.+.+|+++... |++..+..+..++..|+.|.++| |+||||.++ .+....+++.+++... +
T Consensus 23 ~~~~f~~~~~gl~~~~~--g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALA--GLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 34566777779987666 89999999999999999999999 899776554 5778888887777655 3
Q ss_pred -hHHHHHHHHHHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHHHHHHHHHHHHhccccccccc------hhHHHH
Q 016350 140 -NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG------WWRICF 211 (391)
Q Consensus 140 -~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~w~~~f 211 (391)
....+.+..++..++.........++..|+.+ +++|.+..+.-..+..+|.++...+.+.+.+..+ +|++..
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 23345677777788888888888999999997 5789999999999888888766666665553222 388888
Q ss_pred HHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHH
Q 016350 212 WVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVV 290 (391)
Q Consensus 212 ~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (391)
.+.+++.++..+.. +..+|+++ +.++ ++++......++++++||.++..
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke~~~------~~~~------------------------~~~~~~~~~~~~~~~~nr~~~~l 230 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKERSV------EVTE------------------------QEKKISLRDSLRSLFRNRPFRIL 230 (428)
T ss_pred HHHHHHHHHHhhhhhheeeeccc------cccc------------------------cccccccccchhhhcccchHHHH
Confidence 88777777665544 44566210 0000 11222334457788899999988
Q ss_pred HHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 016350 291 FIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 370 (391)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (391)
....++............++|..+..+..+ ..+.......++.+++.++.++++||+|+|+.+..+..+.+++.+++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~-~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGNEG-LISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcCch-hhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHH
Confidence 888888877777777778888888777663 3456667778889999999999999999999999999999999988887
Q ss_pred Hhc
Q 016350 371 ASS 373 (391)
Q Consensus 371 ~~~ 373 (391)
...
T Consensus 310 ~~~ 312 (428)
T PF13347_consen 310 LGP 312 (428)
T ss_pred HHh
Confidence 763
No 104
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=6.8e-18 Score=157.61 Aligned_cols=182 Identities=15% Similarity=0.065 Sum_probs=136.1
Q ss_pred cccchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHH---HHhhhhHHHH
Q 016350 69 VVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI---SATTRNLIGM 144 (391)
Q Consensus 69 ~~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~---~~~~~~~~~l 144 (391)
.....+|.+. +++|.+..+. ++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...+++...+
T Consensus 268 ~~~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (490)
T PRK10642 268 MLLTYMPSYLSHNLHYSEDHG--VLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLI 345 (490)
T ss_pred HHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 3344567655 5678876654 67777888999999999999999999999988877654443332 2234567778
Q ss_pred HHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 016350 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~ 224 (391)
++++++.|++.+........++.|.+|++.|++++++......++..++|.+.+++.+..++|+..+++..+.+++..+.
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 88999999887777777778889999999999999975444455567788887777765444777776666667776666
Q ss_pred hhccccchhHHHHc-----CCHHHHHHHHHHHh
Q 016350 225 MVFCAESPHWLYKK-----GRTAEAEAEFEKLL 252 (391)
Q Consensus 225 ~~~~~e~~~~~~~~-----~~~~~~~~~~~~~~ 252 (391)
.+++||+|++..++ ++.+|+.+.++++.
T Consensus 426 ~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 426 GVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 77789999987754 77888888887765
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.75 E-value=3.1e-17 Score=151.46 Aligned_cols=262 Identities=15% Similarity=0.155 Sum_probs=168.9
Q ss_pred chHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc----chhh-HHHHHhhHHHHHHHHHHHhhhh------
Q 016350 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRR-RAFQLCALPMIIGASISATTRN------ 140 (391)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~i~~~~~~~~~~------ 140 (391)
...+.+.+++|++.... |.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++.++....++
T Consensus 31 ~l~~~~t~~~gls~~~~--g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~ 108 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIM--GTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGK 108 (444)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchH
Confidence 34567778899988777 999999999999999999999998 8874 5555677777777665544432
Q ss_pred HHHHHHHHHHhhhccchhhHHHHHHHhhcC-CccccchHHHHHHHHHHHHHHHHHHhcccccc-------ccchhHHHHH
Q 016350 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE-------IAGWWRICFW 212 (391)
Q Consensus 141 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~w~~~f~ 212 (391)
+..+++..++.+.+.........++.+|+. ++++|.+..++...+..+|..+++.+...+.. ..+ |+..+.
T Consensus 109 ~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g-~~~~~~ 187 (444)
T PRK09669 109 IIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKG-YFYAMM 187 (444)
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh-HHHHHH
Confidence 456666666777766666666778899988 46889988888887777777666654332221 224 888877
Q ss_pred HHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHH
Q 016350 213 VSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVF 291 (391)
Q Consensus 213 ~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
+.+++.++..+.. +..+|.++. + ++ ++.+...+.+++++||.++...
T Consensus 188 i~~ii~~v~~~~~~~~~~e~~~~-----~-~~--------------------------~~~~~~~~~~~~~~n~~~~~l~ 235 (444)
T PRK09669 188 VMGLLGVVLFFCCFFMTKERYTP-----E-VD--------------------------NSSSVWKDLKLLLGNSQWRIMF 235 (444)
T ss_pred HHHHHHHHHHHHHhCCeEEecCC-----C-Cc--------------------------CCCCHHHHHHHHhCCchHHHHH
Confidence 7776665554443 334443110 0 00 0011123456678889888776
Q ss_pred HHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 016350 292 IGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (391)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (391)
...++.............+|.....+. +...+.......+..+++.++.+++.||+|+|+....+.....++.+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 312 (444)
T PRK09669 236 IFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIF 312 (444)
T ss_pred HHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 665555444333233333344333322 11123344455677778889999999999999998887766555444333
No 106
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=6.6e-17 Score=149.31 Aligned_cols=298 Identities=14% Similarity=0.059 Sum_probs=193.8
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch-----hhHHHHHhhHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQLCALP 127 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~ 127 (391)
..++...++..+..........|.+.+++|++.++. +...+...+...+-.+ +|+++||++ ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i--~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARY--QRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 344444567777774444556677777899998887 7888999999988666 999999998 78888888776
Q ss_pred HH-HHHHHHHhhhhHHHHH-HHHHHhhhccchhhHHHHHHHhhcCCccccchHHH---HHHHHHHHHHHHHHHhcccccc
Q 016350 128 MI-IGASISATTRNLIGML-LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGA---FIQIATCLGLMGSLLIGIPVKE 202 (391)
Q Consensus 128 ~~-i~~~~~~~~~~~~~l~-~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~---~~~~~~~~g~~~~~~~~~~l~~ 202 (391)
.+ ++....+..++..... +..++.+++.+...+..-++..|..+ +++....+ .......+|.++++.+++.+.+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~ 183 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD 183 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 63 4433344445544444 47899999999999999999999998 55544333 3334445899999999999988
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcc
Q 016350 203 IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (391)
Q Consensus 203 ~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (391)
..+ ||..|++.+...++..+..++++|++.....+.++++.... .... ....... .+...+..+.+
T Consensus 184 ~~~-~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~----------~~~~~~l~~~l 249 (468)
T TIGR00788 184 KTL-TRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNM-ALLT--LGVLANV----------KVQILGLRGAI 249 (468)
T ss_pred hcC-cchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhh-hhhh--hhHHHHH----------HHHHHHHHHHH
Confidence 888 99999998877777766667778863100000000000000 0000 0000000 00011233345
Q ss_pred cccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHH
Q 016350 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMA 362 (391)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 362 (391)
++|..+...+..++.+............+.+..++.++...|......+++.+++..+.+++.+|++.|+++.++.++.+
T Consensus 250 ~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~ 329 (468)
T TIGR00788 250 QLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYT 329 (468)
T ss_pred hcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 66777665544444111111111112224455667778888999999999999999999999999999999999888888
Q ss_pred HHHHHH
Q 016350 363 VSMAIQ 368 (391)
Q Consensus 363 ~~~~~~ 368 (391)
++.+..
T Consensus 330 ~~~~~~ 335 (468)
T TIGR00788 330 LSSLFD 335 (468)
T ss_pred HHHhCc
Confidence 877554
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.73 E-value=8.9e-17 Score=149.35 Aligned_cols=283 Identities=11% Similarity=0.056 Sum_probs=175.2
Q ss_pred HHHHHHHhhhhhhcccchH-HHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhh----cchh-hHHHHHhhHHHH
Q 016350 56 ATLSSFLFGYHLGVVNEPL-ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD----GVGR-RRAFQLCALPMI 129 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Gr-r~~l~~~~~~~~ 129 (391)
-.++.+...+....+.+.+ ..+.+.+|++.... |.+..+.-+.-++..|+.|.++| |+|| |+.++.+.+..+
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~v--g~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~ 88 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV--GTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANS 88 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHH
Confidence 3344444455555555544 45556679887766 89999999999999999999999 6799 566667888777
Q ss_pred HHHHHHHhhh------hHHHHHHHHHHhhhccchhhHHHHHHHhhcC-CccccchHHHHHHHHHHHHHHHHHHhcccc--
Q 016350 130 IGASISATTR------NLIGMLLGRFVVGTGMGLGPTVAALYVTEVS-PPFVRGTYGAFIQIATCLGLMGSLLIGIPV-- 200 (391)
Q Consensus 130 i~~~~~~~~~------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-- 200 (391)
++..+.-..+ .+..+++..++.+++.....+...++..|+. ++++|.+..++-..+..+|..+.+.+...+
T Consensus 89 i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~ 168 (473)
T PRK10429 89 VVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVN 168 (473)
T ss_pred HHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766654432 1345556667777877888888888999998 589999999886666666644444333221
Q ss_pred -----ccccchhHHHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCc
Q 016350 201 -----KEIAGWWRICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGD 274 (391)
Q Consensus 201 -----~~~~~~w~~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
.+..+ |+....+.+++.++..+.. +..+|.++. .+.++ .++++...
T Consensus 169 ~~g~~~~~~g-~~~~~~i~~~~~~~~~~~~~~~~~e~~~~----~~~~~-----------------------~~~~~~~~ 220 (473)
T PRK10429 169 YVGGGDRGFG-FQMFTLVLIAFFIVSTIITLRNVHEVYSS----DNQVS-----------------------AEGSHLTL 220 (473)
T ss_pred HhCCCchhhh-HHHHHHHHHHHHHHHHHHHHcCceecCCc----ccccc-----------------------ccccCCCH
Confidence 11123 6776666666555544333 335554210 00000 00001111
Q ss_pred cccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHH
Q 016350 275 IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALL 354 (391)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 354 (391)
...++.+++||.++..+...++............++|.....+ .....+.......++.+++.++.+++.||+|+|+.+
T Consensus 221 ~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~ 299 (473)
T PRK10429 221 KDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW 299 (473)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 2234456678887776666655554444333333444433322 112233455555678889999999999999999998
Q ss_pred HHHHHHHHHHHHHHH
Q 016350 355 QWSFFSMAVSMAIQV 369 (391)
Q Consensus 355 ~~~~~~~~~~~~~~~ 369 (391)
.++..+..++.+.+.
T Consensus 300 ~~~~~~~~~~~~~~~ 314 (473)
T PRK10429 300 AGASIFPVLSCGVLL 314 (473)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888776666555544
No 108
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.72 E-value=1.8e-15 Score=135.95 Aligned_cols=283 Identities=16% Similarity=0.168 Sum_probs=196.0
Q ss_pred HHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHhhHHHHHHHHHHH
Q 016350 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-RRRAFQLCALPMIIGASISA 136 (391)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~i~~~~~~ 136 (391)
...++.....+...|.++.+.++.|.+..|+ |.+.++..+...++++++|.++||++ +|+++.+..++.++......
T Consensus 9 ~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qI--G~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 9 LMYFLYFFAYGAFLPYLPLYLESRGFSGTQI--GILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666667788999999999988877 99999999999999999999999986 57777777777777777777
Q ss_pred hhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHh-ccccccccc--hhHHHHHH
Q 016350 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI-GIPVKEIAG--WWRICFWV 213 (391)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~-~~~l~~~~~--~w~~~f~~ 213 (391)
..++++.+++.-++..+...+..|...++..+... ++++-.|-.-...++|.+++... ++.+....+ .....+++
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i 164 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYI 164 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHH
Confidence 88899988888888888888888888888777764 33444455555555555444322 111221111 12345556
Q ss_pred HHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHH
Q 016350 214 SIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (391)
Q Consensus 214 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (391)
.+...++.....+.+|+.|+ +++.++ +.++....+..+++|+|++...++.
T Consensus 165 ~~~~~~ll~~~~l~lp~~~~----~~~~~~-------------------------~~~~~~~~~~~~llk~~~~~~Fll~ 215 (400)
T PF03825_consen 165 AAILSLLLAGFALFLPKTPP----KRSAKE-------------------------SVKKLLGLDALKLLKNPRFLVFLLA 215 (400)
T ss_pred HHHHHHHHHHHHHhCCCCcc----ccccCC-------------------------CcccccchHHHHHhcCccHHHHHHH
Confidence 55555555555566777652 111000 0001111233468888998888787
Q ss_pred HHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhc
Q 016350 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 373 (391)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (391)
.++........+++.+.|+++.-+......+.......++.++.....+++.+|+|.++++.++.+..++=..++....+
T Consensus 216 ~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~ 295 (400)
T PF03825_consen 216 AFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD 295 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 77777776666666677766643333444566777778899999999999999999999999999988887777776633
No 109
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.71 E-value=1.1e-15 Score=146.18 Aligned_cols=138 Identities=14% Similarity=0.023 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCC
Q 016350 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 171 (391)
+...+..++..++.++.|+++||+|||++++.+.++.+++.++.+++++...+++.+++.|++.++.++...++++|++|
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34556668889999999999999999999999999999999999999888888888999999888888999999999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccccc
Q 016350 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 172 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
.+.|++++|+.+....+|.+++|.+++.+.+.. ...+|++.++..++..++.+++||+
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~~LPET 736 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSFVGIT--KAAPILFASAALACGGLLALKLPDT 736 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999998876643 4677777777777776667778887
No 110
>PRK09848 glucuronide transporter; Provisional
Probab=99.70 E-value=1.1e-15 Score=141.37 Aligned_cols=279 Identities=14% Similarity=0.155 Sum_probs=167.4
Q ss_pred HHHHHhhhhhhcccch-HHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc----hhhHHH-HHhhHHHHHH
Q 016350 58 LSSFLFGYHLGVVNEP-LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV----GRRRAF-QLCALPMIIG 131 (391)
Q Consensus 58 ~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~----Grr~~l-~~~~~~~~i~ 131 (391)
++.+..........+. .+.+.+.+|++..+. |.+.+...+..++..++.|+++||. |||+.+ +.+.+...+.
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~--g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAA--GTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 3444444444443333 346666779887766 9999999999999999999999996 777755 5555544444
Q ss_pred HHHH-Hh----hh--hHHHHHHHHHHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHH-----HHHHHHHHHHhcc
Q 016350 132 ASIS-AT----TR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIA-----TCLGLMGSLLIGI 198 (391)
Q Consensus 132 ~~~~-~~----~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~g~~~~~~~~~ 198 (391)
.++. .. ++ .....++.-++.+++.+...+...++..|..+ +++|.+..+.-..+ ..++..++|.+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~ 172 (448)
T PRK09848 93 SVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKN 172 (448)
T ss_pred HHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4432 21 11 22334445567787777777777777777665 46788876665443 2345556666654
Q ss_pred ccccccc-hhHHHHHHHHHHHHHHHH-HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccc
Q 016350 199 PVKEIAG-WWRICFWVSIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIV 276 (391)
Q Consensus 199 ~l~~~~~-~w~~~f~~~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (391)
....... .|.....+.+++.++..+ .....+|+++ + + .++.....
T Consensus 173 ~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~----~-~----------------------------~~~~~~~~ 219 (448)
T PRK09848 173 SSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVV----R-I----------------------------VAQPSLKI 219 (448)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccC----C-C----------------------------ccCCCHHH
Confidence 3321111 021111222222222222 2233444421 0 0 00001122
Q ss_pred cchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHH
Q 016350 277 KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQW 356 (391)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 356 (391)
.++++++||.++...+..++............++|.++.++.+....+.......++.+++.++.+++.||+++|+.+.+
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 35667889999887777777766666555566667766655443333333444456677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 016350 357 SFFSMAVSMAIQVAA 371 (391)
Q Consensus 357 ~~~~~~~~~~~~~~~ 371 (391)
+..+..++.+++.+.
T Consensus 300 g~~~~~i~~~~~~~~ 314 (448)
T PRK09848 300 GALLGTCGYLLFFWV 314 (448)
T ss_pred HHHHHHHHHHHHHHc
Confidence 988888887776654
No 111
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.69 E-value=3.6e-15 Score=133.19 Aligned_cols=187 Identities=21% Similarity=0.234 Sum_probs=145.8
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh-hHHHHHh
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLC 124 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~ 124 (391)
.+..|+.+.+..+..++...+.+++.+..-++.++++.+.+...-|++.++..++.+++++..|++..|.|. |+.++.+
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 344577788888889999999999888887777876655544444999999999999999999999999986 7888999
Q ss_pred hHHHHHHHHHH-Hhh---h-hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccc
Q 016350 125 ALPMIIGASIS-ATT---R-NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (391)
Q Consensus 125 ~~~~~i~~~~~-~~~---~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 199 (391)
.++..+++++. ++. + .-+.++++|++.|+|.|... ..-+|+++....++|.++++..+.+..+|.++||.++..
T Consensus 109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 99999999987 433 3 56788899999999888775 677899999989999999999999888888888887765
Q ss_pred ccccc--c----------hhHHHHHHHHHHHHHHHHHh-hccccchh
Q 016350 200 VKEIA--G----------WWRICFWVSIVPAAILCLAM-VFCAESPH 233 (391)
Q Consensus 200 l~~~~--~----------~w~~~f~~~~~~~~~~~~~~-~~~~e~~~ 233 (391)
+.... | .+..+-|+.++..++.++.. +++.|.++
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 54322 1 02344456666666654444 55666643
No 112
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.69 E-value=1.2e-15 Score=133.26 Aligned_cols=205 Identities=15% Similarity=0.127 Sum_probs=150.6
Q ss_pred HhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc-----------
Q 016350 136 ATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA----------- 204 (391)
Q Consensus 136 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------- 204 (391)
+...+|..++++-++.|.|.+...+..+.++++..++|++.+.+++.+..+++|.+++|++++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 456789999999999999999999999999999999999999999999999999999999999776321
Q ss_pred ----chhHHHHHHHHHHHHHHHHHhhc--cccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccc
Q 016350 205 ----GWWRICFWVSIVPAAILCLAMVF--CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKF 278 (391)
Q Consensus 205 ----~~w~~~f~~~~~~~~~~~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (391)
.+|+++|++.+...++..+.+.+ +||.+ +++++ +. .++ +..+.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~------~~~~~--~~---------------------~~~--~~~~~ 133 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQ------EADVA--RV---------------------SSG--DTTQK 133 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC------ccccc--cc---------------------ccc--cccch
Confidence 24999999665555544444433 34431 11000 00 000 00111
Q ss_pred hhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHH--HhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHH
Q 016350 279 EELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSV--FKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQW 356 (391)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 356 (391)
++.+++|.++...+..+++.........+.+.|+.+. ++.+....+........+..+|+++++++.||+++|+.+.+
T Consensus 134 ~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~ 213 (310)
T TIGR01272 134 TSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAF 213 (310)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 2355667777776777777767777778888888653 35555667788888999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHH
Q 016350 357 SFFSMAVSMAIQVAA 371 (391)
Q Consensus 357 ~~~~~~~~~~~~~~~ 371 (391)
+..+..++.++....
T Consensus 214 ~~~l~~~~~~l~~~~ 228 (310)
T TIGR01272 214 NAFLAVLLSIGAALT 228 (310)
T ss_pred HHHHHHHHHHHHHHc
Confidence 877777766555443
No 113
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.68 E-value=3e-16 Score=120.82 Aligned_cols=136 Identities=22% Similarity=0.384 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCcc
Q 016350 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (391)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 173 (391)
.+.+.++..++.++.|++.||+|||+.+..+.....++.+....+++++.+.+.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 34567788899999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhc-ccc
Q 016350 174 VRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVF-CAE 230 (391)
Q Consensus 174 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~-~~e 230 (391)
+|++..++.+....+|..+++.+++.+.+..+ |++.|++.+...++..+..++ .||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999988877 899998877776666555433 443
No 114
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.67 E-value=1.8e-15 Score=133.45 Aligned_cols=291 Identities=18% Similarity=0.198 Sum_probs=179.9
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH--H
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM--I 129 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~--~ 129 (391)
........+...+..+...|..|...++ .|++.+++ |.+.++..+...+.+|+.|.++||.|.||-++..+... .
T Consensus 9 ~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~i--G~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 9 YWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEI--GIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH--HHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHH--HHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHH
Confidence 3344555566666677778888877765 89998888 99999999999999999999999999776554433222 2
Q ss_pred HHHHHH-Hhh----hhH-HHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc
Q 016350 130 IGASIS-ATT----RNL-IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (391)
Q Consensus 130 i~~~~~-~~~----~~~-~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (391)
.+.... .+. .|. ...+++-+..|+......+..-+++.++. ++.+.=.|-.-...++|.+++..++|.+.+.
T Consensus 87 ~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i 164 (412)
T PF01306_consen 87 FGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI 164 (412)
T ss_dssp CHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee
Confidence 222222 222 232 23444445556666666677777666654 3445666777788889989999999988875
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhcc-ccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcc
Q 016350 204 AGWWRICFWVSIVPAAILCLAMVFC-AESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELL 282 (391)
Q Consensus 204 ~~~w~~~f~~~~~~~~~~~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (391)
.+ +..|++....+++..++.++. |+.++....++... .++++....+..+++
T Consensus 165 ~p--~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~l~ 217 (412)
T PF01306_consen 165 NP--NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALG-------------------------AKKDKVSLKDVLSLF 217 (412)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSS-------------------------S------HHHHHHHT
T ss_pred Cc--cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccc-------------------------cCCCCCcHHHHHHHh
Confidence 43 677777666555554444433 33321100000000 000111122345788
Q ss_pred cccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhc---CCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHH
Q 016350 283 YGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSA---GLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFF 359 (391)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (391)
++|++|...+........+.......+.|.....+.. ....|++.+...+..++...+.+++.+|+|.|+.++++..
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~ 297 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGV 297 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHH
Confidence 8999998777655554444443334455554433322 2235778888889999999999999999999999999988
Q ss_pred HHHHHHHHHHHHhcc
Q 016350 360 SMAVSMAIQVAASSS 374 (391)
Q Consensus 360 ~~~~~~~~~~~~~~~ 374 (391)
++++=.....+.++.
T Consensus 298 i~~iRi~~~~~~~~~ 312 (412)
T PF01306_consen 298 IMAIRIIGSGFATNP 312 (412)
T ss_dssp HHHHHHHHHHT--SH
T ss_pred HHHHHHHHHhhhcch
Confidence 888877776665553
No 115
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.67 E-value=6e-18 Score=156.86 Aligned_cols=304 Identities=17% Similarity=0.184 Sum_probs=3.0
Q ss_pred HHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 134 (391)
.+++..+............++++.+.|+++.++. |++.+.+-++..+..++..++.+|..|-+.+-.|.+++++++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~--G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQS--GLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHH
Confidence 3444444556667777888999999999999888 99999999999999999999999988888888899999999988
Q ss_pred HHhh------------h--------------------------------------hHHHHHHHHHHhhhccchhhHHHHH
Q 016350 135 SATT------------R--------------------------------------NLIGMLLGRFVVGTGMGLGPTVAAL 164 (391)
Q Consensus 135 ~~~~------------~--------------------------------------~~~~l~~~r~l~G~~~g~~~~~~~~ 164 (391)
+++- . -+..++++.++.|+|....++.+.+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 7651 0 0356778899999999999999999
Q ss_pred HHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc---------------------chhHHHHHHHHHHHHHHHH
Q 016350 165 YVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA---------------------GWWRICFWVSIVPAAILCL 223 (391)
Q Consensus 165 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------------------~~w~~~f~~~~~~~~~~~~ 223 (391)
|+-|..++++-+..+|+..+...+|..+|.++|+.+...+ |.|..-|++.+...++..+
T Consensus 165 YiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 165 YIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998766421 1155566666666666666
Q ss_pred HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhh---hcccCCCCccccchhcccccchhHHHHHHHHHHHH
Q 016350 224 AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELS---KLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQ 300 (391)
Q Consensus 224 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (391)
.++++|++-+... +..++.+...++. .+...+...+.. ...+..++-+...+++++||.+....+......+.
T Consensus 245 pl~~FPk~lp~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~ 320 (539)
T PF03137_consen 245 PLFFFPKKLPGTS--ERQEEKESSERKE--EDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFI 320 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCccCCCcc--cccchhhhhhcch--hhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 6677776522110 0000000000000 000000000000 01112233455678889999998888888888877
Q ss_pred hhhchhhHHHhHHHHHhhcCCChhHHHHHH-HHHHHHHHHHHHHHHhhhC--chHHHHHHHHHHHHH
Q 016350 301 QLSGINAIFYFSSSVFKSAGLSSGLANVFV-GIANLLGSVVAMVLMDKLG--RKALLQWSFFSMAVS 364 (391)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~~~ 364 (391)
..+...+.|-|++..++.+...++.+.... ..+..+|.+++|++.+|++ .|..+....+...++
T Consensus 321 ~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~ 387 (539)
T PF03137_consen 321 VSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVS 387 (539)
T ss_dssp -------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHH
Confidence 777788889999988888777766654443 3467789999999999985 344444444444333
No 116
>PRK11462 putative transporter; Provisional
Probab=99.66 E-value=1.4e-14 Score=133.84 Aligned_cols=260 Identities=15% Similarity=0.106 Sum_probs=167.7
Q ss_pred hHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc----chhhHH-HHHhhHHHHHHHHHHHhhhh------H
Q 016350 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRA-FQLCALPMIIGASISATTRN------L 141 (391)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~-l~~~~~~~~i~~~~~~~~~~------~ 141 (391)
....+.+..|++.... |.+..+.-+--++.-|+.|.++|| +||||. ++++.+..+++.+++-..++ .
T Consensus 32 l~~fyt~~~Gl~~~~~--g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 32 MMFFYTDIFGIPAGFV--GTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHHhhCCCHHHH--HHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHH
Confidence 3455667789887766 888888888889999999999996 798655 44576777777766654442 3
Q ss_pred HHHHHHHHHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHHHHHHHHHHHHhccccccccc------hhHHHHHHH
Q 016350 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG------WWRICFWVS 214 (391)
Q Consensus 142 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~------~w~~~f~~~ 214 (391)
..+.+.-.+..++.........++..|+.+ +++|.+..++...+..+|..+++.+...+.+..+ +|+....+.
T Consensus 110 ~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~ 189 (460)
T PRK11462 110 IYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVL 189 (460)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHH
Confidence 455666667788888888788889999987 7899999999999988887777666443332211 277766666
Q ss_pred HHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHH
Q 016350 215 IVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIG 293 (391)
Q Consensus 215 ~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (391)
+++.+++.+.. ...+|.++ + +. + +.......+..++||.++.....
T Consensus 190 ~ii~~i~~~i~~~~~kE~~~----~-~~-~---------------------------~~~~~~~l~~~~~Nk~~~~l~~~ 236 (460)
T PRK11462 190 SVVAFMMLAFCFFTTKERVE----A-PP-T---------------------------TTSMREDLRDIWQNDQWRIVGLL 236 (460)
T ss_pred HHHHHHHHHHHHhcceeccC----C-Cc-c---------------------------CCCHHHHHHHHhCChHHHHHHHH
Confidence 66555554433 33444321 0 00 0 00011234556778888766555
Q ss_pred HHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 016350 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (391)
.++.............+|.....+.. ...+.......++.+++.++++++.||+++|+....+.....+..+++
T Consensus 237 ~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~ 310 (460)
T PRK11462 237 TIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAM 310 (460)
T ss_pred HHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 54554444443344445555444322 223345666778888999999999999999988765544444433333
No 117
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.65 E-value=6.6e-15 Score=131.27 Aligned_cols=289 Identities=19% Similarity=0.180 Sum_probs=202.5
Q ss_pred HHHHHHHHhhhhhhcccch-HHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc----chhh-HHHHHhhHHH
Q 016350 55 VATLSSFLFGYHLGVVNEP-LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRR-RAFQLCALPM 128 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~ 128 (391)
.-.++-+............ +-.+.+.+|++.... |.+..+--+--++.-|+.|.++|| +||+ +.++.+.+-.
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~a--G~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~ 93 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALA--GTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPF 93 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHH--HHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHH
Confidence 3333444443444333333 345666788887666 777777777788999999999995 8875 4556677888
Q ss_pred HHHHHHHHhhhh------HHHHHHHHHHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHHHHHHHHHHHHhccccc
Q 016350 129 IIGASISATTRN------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 129 ~i~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (391)
++.+.++-.+++ ....++.-.+.+++.........++..|+.+ ++||.+..+.-..+..+|..+...+.+.+.
T Consensus 94 ~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv 173 (467)
T COG2211 94 AIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLV 173 (467)
T ss_pred HHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877763 4556677888889888888888888999886 689999999999988888666555544433
Q ss_pred cccc------hhHHHHHHHHHHHHHHHHHhhc-cccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCc
Q 016350 202 EIAG------WWRICFWVSIVPAAILCLAMVF-CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGD 274 (391)
Q Consensus 202 ~~~~------~w~~~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
...+ +|+..-.+.+++.++..+.+++ ..|.+. +.++.+ +..+.+.
T Consensus 174 ~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~----~~~~~~------------------------~~~~~~~ 225 (467)
T COG2211 174 KLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVV----ETQPTK------------------------TGVKLKL 225 (467)
T ss_pred HHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC----ccccCc------------------------ccccccH
Confidence 2211 2666666666666655554443 444321 000000 0001111
Q ss_pred cccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHH
Q 016350 275 IVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALL 354 (391)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 354 (391)
..++..+++||.+....+..++.............+|.+..++...............+.+++.++..++.+|+|+|++.
T Consensus 226 ~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~ 305 (467)
T COG2211 226 KDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF 305 (467)
T ss_pred HHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH
Confidence 22334577899998888867666666666666778888888887777777788888888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 016350 355 QWSFFSMAVSMAIQVAASS 373 (391)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~ 373 (391)
.++.++.+++.+++.+.+.
T Consensus 306 ~~~~~~~~i~~~~~~f~~~ 324 (467)
T COG2211 306 LIGLLLLAVGYLLLYFTPA 324 (467)
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 9999999999999998873
No 118
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.64 E-value=8.5e-15 Score=133.11 Aligned_cols=155 Identities=14% Similarity=0.187 Sum_probs=126.0
Q ss_pred chHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHH
Q 016350 72 EPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (391)
Q Consensus 72 ~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 150 (391)
...|. +.+++|.+..+. +++.+...++..++.++.|+++||+|||+.+..+.....+.......+++.+.+++.+++
T Consensus 237 ~~~p~~l~~~~~~~~~~~--g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 314 (393)
T PRK15011 237 INMPLFIINELHLPEKLA--GVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLL 314 (393)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 34554 456788876665 777777777778899999999999999998887776666555555567788888889999
Q ss_pred hhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhcccc
Q 016350 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (391)
Q Consensus 151 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e 230 (391)
.+++.|...+....+..|.+|+ +|+++.++.+....+|..+++.+++.+.+..+ |+..|++.++..++..+..++.||
T Consensus 315 ~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 315 NAIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9988888777777888999875 59999999999999999999999999998877 999999888877777776666654
No 119
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.64 E-value=5.3e-15 Score=135.27 Aligned_cols=158 Identities=23% Similarity=0.188 Sum_probs=131.7
Q ss_pred cchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHH
Q 016350 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (391)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 150 (391)
....|.+.++.|.+..+. +++.+.+.++..++.++.|++.||+|||+.+..+.+...++.++..+.++.+.+.+..++
T Consensus 240 ~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (406)
T PRK11551 240 LNWLPSLLVGQGLSRSQA--GLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFA 317 (406)
T ss_pred HHHHHHHHHhCCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 345678888888887766 888999999999999999999999999999988877777777777777788878888888
Q ss_pred hhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhcccc
Q 016350 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (391)
Q Consensus 151 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e 230 (391)
.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+++.+.+..++|...++......++..+..+++.+
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99988888888889999999999999999999999999999999999999887665777777666665555555444433
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=1.3e-15 Score=139.07 Aligned_cols=160 Identities=13% Similarity=0.119 Sum_probs=128.2
Q ss_pred chHHHhHhhhccCcch------hHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh----hH
Q 016350 72 EPLESISLDLGFNGNT------LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR----NL 141 (391)
Q Consensus 72 ~~~~~i~~~~~~~~~~------~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~----~~ 141 (391)
...|.+.++.|.+++. ...+...++..++..++.++.|+++||+|||+++..+.++.+++..+..... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 4456666676654311 2237888888999999999999999999999999999999988877666532 34
Q ss_pred HHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHH-HHHHHHHHHHHHhccccccccc-----hhHHHHHHHH
Q 016350 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAG-----WWRICFWVSI 215 (391)
Q Consensus 142 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~-----~w~~~f~~~~ 215 (391)
+.+++.+++.|++.+...+....++.|++|+++|++++++.+ ....+|..+||.++|.+.+..+ +|+..|.+.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 667788999999999888888999999999999999999997 6788999999999999887632 2999998877
Q ss_pred HHHHHHHHHh-hccccc
Q 016350 216 VPAAILCLAM-VFCAES 231 (391)
Q Consensus 216 ~~~~~~~~~~-~~~~e~ 231 (391)
+..++..++. ++++|+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 7766655544 556665
No 121
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.63 E-value=1.1e-14 Score=132.84 Aligned_cols=156 Identities=15% Similarity=0.074 Sum_probs=130.3
Q ss_pred cchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHH
Q 016350 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (391)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 150 (391)
...+|.+.++.|.+ +. ++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++
T Consensus 236 ~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (399)
T PRK05122 236 ATFITLYYAARGWD--GA--ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAAL 311 (399)
T ss_pred HHHHHHHHHHcccc--cc--hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 34455555666652 23 566778888899999999999999999999999999888888888888888888889999
Q ss_pred hhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhcccc
Q 016350 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (391)
Q Consensus 151 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e 230 (391)
.|++.+...+.....+.|.+|+++|+++.++++....+|..+++.+.+.+.+..+ |++.|++.++..++..+..+++++
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999998888888888899999999999999999999999999989899888888 899999887777776666555544
Q ss_pred c
Q 016350 231 S 231 (391)
Q Consensus 231 ~ 231 (391)
+
T Consensus 391 ~ 391 (399)
T PRK05122 391 R 391 (399)
T ss_pred c
Confidence 3
No 122
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.63 E-value=2.5e-15 Score=135.89 Aligned_cols=147 Identities=18% Similarity=0.098 Sum_probs=124.6
Q ss_pred chHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhH--HHHHHHHH
Q 016350 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL--IGMLLGRF 149 (391)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~--~~l~~~r~ 149 (391)
...+.+.++++.++++. +++.+.+.++..++.++.|++.||+|||+.+..+..+..++.+...+.++. ..+++..+
T Consensus 226 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 226 GLYKPYGQSLGLSDGFL--VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 44566678888776555 788999999999999999999999999999999999888888877776643 33445678
Q ss_pred HhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHH
Q 016350 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (391)
Q Consensus 150 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~ 221 (391)
+.|++.+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.+..| |++.|.+.++..++.
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIG-FEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHHh
Confidence 88888888887778899999999999999999999999999999999999998888 999998877666554
No 123
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.63 E-value=6.3e-14 Score=126.30 Aligned_cols=226 Identities=15% Similarity=0.090 Sum_probs=153.0
Q ss_pred chhhHHHHHHHHhhccCCCCCCCChhHHHhhhcCCcc--cCC----CCCCcchhhHHHHHHHHHHHHhhhhhhcccchHH
Q 016350 2 WGRQREASMMYKRTSSRDRSSTFDVEETTALVQNGTE--VEN----TNPSWKLSFPHVLVATLSSFLFGYHLGVVNEPLE 75 (391)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (391)
+|+++||++..+..+..++++.+..+...+.+.+..+ +.. ..+++..++...+.+.+......-+...+.....
T Consensus 215 k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst 294 (485)
T KOG0569|consen 215 KGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYST 294 (485)
T ss_pred cCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHH
Confidence 6888999999999887655443332221111111111 111 0122233333333444444444444555666778
Q ss_pred HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh---hHH------HHHH
Q 016350 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR---NLI------GMLL 146 (391)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~---~~~------~l~~ 146 (391)
.+.++-|++.++. -+.+....+...+..+++..+.||+|||+.++.+..++.+..++..... +.. ..++
T Consensus 295 ~i~~~aG~~~~~a--~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 295 SIFKTAGFTPEEA--QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred HHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 8999999988877 5788888888999999999999999999999999999999888776542 111 1233
Q ss_pred HHHHhhhccchh-hHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHH-H
Q 016350 147 GRFVVGTGMGLG-PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL-A 224 (391)
Q Consensus 147 ~r~l~G~~~g~~-~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~-~ 224 (391)
+.++..++.+.. -|+..-+.+|.+|++.|+.++++......+...+-...-..+.+..|. +.|++..+++++..+ .
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~--~~filF~i~~~~~~i~~ 450 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP--YVFILFVIPLAIFLIYL 450 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--hhhHHHHHHHHHHHHHH
Confidence 343333333322 357778899999999999999999999999988888887778777773 667766666666555 4
Q ss_pred hhccccc
Q 016350 225 MVFCAES 231 (391)
Q Consensus 225 ~~~~~e~ 231 (391)
+.++||+
T Consensus 451 ~~~lPET 457 (485)
T KOG0569|consen 451 YRYLPET 457 (485)
T ss_pred HHhCccc
Confidence 5779999
No 124
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.63 E-value=2e-15 Score=140.25 Aligned_cols=304 Identities=15% Similarity=0.193 Sum_probs=221.0
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
.+.++++..+..++....+...+..+.+.|+++.++. |++.+.+-++..+...+..+..-|.-|-+.+-.|.++++++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~s--G~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQS--GLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcc--eeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 4556667777888888888889999999999998887 99999999999999999999999998989999999999999
Q ss_pred HHHHHhh--------------------h--------------------------------hHHHHHHHHHHhhhccchhh
Q 016350 132 ASISATT--------------------R--------------------------------NLIGMLLGRFVVGTGMGLGP 159 (391)
Q Consensus 132 ~~~~~~~--------------------~--------------------------------~~~~l~~~r~l~G~~~g~~~ 159 (391)
++++++- + -+..++++.++.|+|....+
T Consensus 176 sll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 176 SLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 9998862 0 02256678999999999999
Q ss_pred HHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc------------------chhHHHHHHHHHHHHHH
Q 016350 160 TVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA------------------GWWRICFWVSIVPAAIL 221 (391)
Q Consensus 160 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------------------~~w~~~f~~~~~~~~~~ 221 (391)
+.+.+|+-|...+++-+..+|+......+|.++|.++|+++...+ |-|+.-|++.+.+.++.
T Consensus 256 tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 256 TLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred cCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998765322 12677777788888888
Q ss_pred HHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHh
Q 016350 222 CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQ 301 (391)
Q Consensus 222 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (391)
.+.++++|.+.+. ..++.+ .+..+.....+. ..++.....+.-.+-+...+++++||.+....+...+-....
T Consensus 336 a~p~f~fPk~lp~---~~~~~~-~~~~~~~k~~~~---~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~ 408 (735)
T KOG3626|consen 336 AVPLFFFPKELPK---SQKRKR-ARDLHVLKTESG---GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAI 408 (735)
T ss_pred HHHHHhCcccCcc---ccccch-hhhhcccccccc---cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 8888888876321 111100 001000000000 000000000000122445677889999998888888888888
Q ss_pred hhchhhHHHhHHHHHhhcCCChhHHHHHHHH-HHHHHHHHHHHHHhhhC--chHHHHHHHHHHHHH
Q 016350 302 LSGINAIFYFSSSVFKSAGLSSGLANVFVGI-ANLLGSVVAMVLMDKLG--RKALLQWSFFSMAVS 364 (391)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~~~ 364 (391)
.+..+++|-|++..++.+...+..+....++ +..+|.+++|+++.|+. .|.......+...+.
T Consensus 409 ~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 409 TGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS 474 (735)
T ss_pred hhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence 8878888999998888777666665544443 55678899999999975 344444444433333
No 125
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.62 E-value=2.8e-13 Score=124.17 Aligned_cols=251 Identities=17% Similarity=0.158 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHh-hHHHHHHHHHHHhh--hhHHHHHHHHHHhhhccchhhHHHHHHH
Q 016350 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLC-ALPMIIGASISATT--RNLIGMLLGRFVVGTGMGLGPTVAALYV 166 (391)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~-~~~~~i~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i 166 (391)
+++..++..+..++..|+.|.++|+-|+||.++.. ..+..+++.+..+. .+++...+.-++.-++.+...+...+++
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~L 151 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYL 151 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 36778888888999999999999999987776664 44445566666653 3455555556666677888888889999
Q ss_pred hhcCCcccc--------------------------chHHHHHHHHHHHHHHHHHHhccccccccc-------hhHHHHHH
Q 016350 167 TEVSPPFVR--------------------------GTYGAFIQIATCLGLMGSLLIGIPVKEIAG-------WWRICFWV 213 (391)
Q Consensus 167 ~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-------~w~~~f~~ 213 (391)
.|..+++++ ++..+.-.....+|.++..++.-.+....+ .-|..+.+
T Consensus 152 P~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~ 231 (477)
T PF11700_consen 152 PDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLI 231 (477)
T ss_pred HhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHH
Confidence 999999888 888888888888887776666544322111 14777877
Q ss_pred HHHHHHHHHH-HhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHH
Q 016350 214 SIVPAAILCL-AMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (391)
Q Consensus 214 ~~~~~~~~~~-~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
.++.-++..+ .++++||.|+....+..........+++ ...++++.+.|+....++
T Consensus 232 ~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l-----------------------~~t~k~~~~~~~~~~fLi 288 (477)
T PF11700_consen 232 VALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRL-----------------------WRTFKEIRKLRQLFLFLI 288 (477)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHH-----------------------HHHHHHHHhChHHHHHHH
Confidence 7777665544 4566787754211111111111111111 112344555577777777
Q ss_pred HHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCch--HHHHHHHHHHHH
Q 016350 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRK--ALLQWSFFSMAV 363 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~ 363 (391)
..+++.-...........|..+.++.+..+.........+.+++|+++.|++.||+|.| +++.++.+...+
T Consensus 289 a~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~ 361 (477)
T PF11700_consen 289 AYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWII 361 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 77777766666677777888888888877777788889999999999999999999988 776666555533
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.61 E-value=3.7e-15 Score=136.78 Aligned_cols=140 Identities=12% Similarity=0.016 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhc
Q 016350 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (391)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 169 (391)
.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+....++.|.
T Consensus 264 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 343 (420)
T PRK09528 264 FGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLN 343 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 38889999999999999999999999999999999999999988999999999999999999998888888888899999
Q ss_pred CCccccchHHHH-HHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHh-hcccc
Q 016350 170 SPPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM-VFCAE 230 (391)
Q Consensus 170 ~~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~-~~~~e 230 (391)
+|++.|++..+. ++....+|..+++.+.+.+.+..| |+..|.+.++..++..+.. +..++
T Consensus 344 ~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 344 FDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred cCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999887665 677788999999999999999888 9999998777666554444 33433
No 127
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.60 E-value=3.1e-14 Score=127.45 Aligned_cols=165 Identities=22% Similarity=0.345 Sum_probs=143.7
Q ss_pred HHHhhhhhhcccchHHHhHhhh-ccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhH-HHHHhhHHHHHHHHHHHh
Q 016350 60 SFLFGYHLGVVNEPLESISLDL-GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR-AFQLCALPMIIGASISAT 137 (391)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~i~~~~~~~ 137 (391)
.+.............|.+.++. |.+..+. ++..+...++..++.++.+++.||+|||+ .+..+..+..++.+....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEA--GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3334444445555667777665 7766665 89999999999999999999999999999 999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHH
Q 016350 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (391)
Q Consensus 138 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~ 217 (391)
.++.+.+.+..++.|++.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+ |+..|.+.++.
T Consensus 262 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~-~~~~~~~~~~~ 340 (352)
T cd06174 262 APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGG-YGGVFLILAAL 340 (352)
T ss_pred hccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-cchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998777 89999998888
Q ss_pred HHHHHHHhhc
Q 016350 218 AAILCLAMVF 227 (391)
Q Consensus 218 ~~~~~~~~~~ 227 (391)
.++..+..++
T Consensus 341 ~~i~~i~~~~ 350 (352)
T cd06174 341 ALLAALLLLL 350 (352)
T ss_pred HHHHHHHhee
Confidence 8777666544
No 128
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.59 E-value=3.9e-13 Score=116.78 Aligned_cols=282 Identities=17% Similarity=0.092 Sum_probs=191.3
Q ss_pred hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch-----hhHHHHH-hhHHHHHHHHHHHhh-----h------
Q 016350 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQL-CALPMIIGASISATT-----R------ 139 (391)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~-~~~~~~i~~~~~~~~-----~------ 139 (391)
+..|+++...-. +.+.++..+. ....+.+|+.+|+.+ ||..++. |......+..+..++ .
T Consensus 6 MIvEL~vpA~lv--~~lval~~~~-ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~ 82 (403)
T PF03209_consen 6 MIVELGVPAWLV--ALLVALHYLV-APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSS 82 (403)
T ss_pred HHHHhccHHHHH--HHHHHHHHHH-HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccc
Confidence 566777754433 6666666554 357899999999999 8866655 566666655555442 2
Q ss_pred --hH-H--HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH
Q 016350 140 --NL-I--GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (391)
Q Consensus 140 --~~-~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~ 214 (391)
.+ + ...+...+.|+|.+...+...++++|..|+|+|+++.++......+|.+++..+.+.+.+.+..-|..-.+.
T Consensus 83 ~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~ 162 (403)
T PF03209_consen 83 GPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQ 162 (403)
T ss_pred cccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHH
Confidence 22 2 334457788999999999999999999999999999999999999999999999888777665334433333
Q ss_pred HH--HHHHHHHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHH
Q 016350 215 IV--PAAILCLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFI 292 (391)
Q Consensus 215 ~~--~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (391)
.. +.+...++..+-.|.+..... ...++++......+++++.+|+.+..+.
T Consensus 163 ~~a~i~~~l~~ia~wg~E~r~~~~~---------------------------~~~~~~~~~f~~a~~~~~~~~~a~~f~~ 215 (403)
T PF03209_consen 163 GVALIALLLNLIALWGQEPRRSRRA---------------------------AAAERPRPPFREAWRQVWASPQARRFFV 215 (403)
T ss_pred HHHHHHHHHHHHHHHhcccCCcccc---------------------------cCCCCCCccHHHHHHHHHhCCChhHHHH
Confidence 22 222222223333333110000 0001122223345667777888888777
Q ss_pred HHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHh-hhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 293 GSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMD-KLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
..++....++.-...+-.|--++++.+..+...+....+.+..+|....|++.. |.+++++..+++....+++.++.+.
T Consensus 216 fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a 295 (403)
T PF03209_consen 216 FLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA 295 (403)
T ss_pred HHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 777777776666667777888888888777888889999999999999998876 6777888888888888888887776
Q ss_pred hccCCCCchHhHHhhhh
Q 016350 372 SSSYIPGSASLYLSVGG 388 (391)
Q Consensus 372 ~~~~~~~~~~~~~~~~g 388 (391)
......+..-....+.|
T Consensus 296 ~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 296 GPLGSPWLFRPGVFLLG 312 (403)
T ss_pred HhcccchHHHHHHHHHH
Confidence 65544444333333333
No 129
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.59 E-value=8.7e-13 Score=112.81 Aligned_cols=268 Identities=19% Similarity=0.207 Sum_probs=167.4
Q ss_pred cccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHH
Q 016350 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (391)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r 148 (391)
..+|..-.+.+++|.+++++ +.+....+...++..++.|.++||+|||+.-+..+++.+++++ +-..++++.++++|
T Consensus 52 LQGpY~Y~LY~~yg~~~~qI--a~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GR 128 (354)
T PF05631_consen 52 LQGPYLYALYESYGFSEHQI--AILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGR 128 (354)
T ss_pred hhcchhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHH
Confidence 34666666778899988887 7888888889999999999999999999999999999998886 45668999999999
Q ss_pred HHhhhccchhhHHHHHHH-hhcC----CccccchHHHHHH-HHHHHHHHHHHHhccccccccch-hHHHHHHHHHHHHHH
Q 016350 149 FVVGTGMGLGPTVAALYV-TEVS----PPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAIL 221 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~-w~~~f~~~~~~~~~~ 221 (391)
++.|++....+...-++. .|.- |++..+...+... ..+++-.+++.+++-.+.+..+. -..+|....+..++.
T Consensus 129 vlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~ 208 (354)
T PF05631_consen 129 VLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVA 208 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHH
Confidence 999999999998887764 4542 2222222222222 22333345555555555544331 367888777666665
Q ss_pred HHHhh-ccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHH
Q 016350 222 CLAMV-FCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQ 300 (391)
Q Consensus 222 ~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (391)
.+... ..+|++.. ..+..+..+.. ...++.+.++|+.+.+-+...++-..
T Consensus 209 ~~~I~~~W~ENyg~---~~~~~~~~~~~--------------------------~~a~~~i~~d~ril~LG~~qslFE~s 259 (354)
T PF05631_consen 209 AVLILKTWPENYGD---TSSSSSLSGSF--------------------------REAWRAILSDPRILLLGLIQSLFEGS 259 (354)
T ss_pred HHHHHhcccccCCC---cccccchHHHH--------------------------HHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 55443 34554210 00011100000 11233455667777666666665555
Q ss_pred hhhchhhHHHhHHHHH-hhcCCChhHHHHHHHHHHHHHHHHHHHHHh-hhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 301 QLSGINAIFYFSSSVF-KSAGLSSGLANVFVGIANLLGSVVAMVLMD-KLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 301 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
.+.... .+.|..- +.....-|+++..+.++.++|+.+..++.. +......+...+.+.++++.+..+.
T Consensus 260 my~FVf---lWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~aa~~l~~pv~~ 329 (354)
T PF05631_consen 260 MYLFVF---LWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAVAAVSLAIPVVT 329 (354)
T ss_pred HHHhee---eeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 444322 2233222 122455788999999999999988876554 4444445555555555555554444
No 130
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.58 E-value=1.6e-13 Score=121.50 Aligned_cols=174 Identities=18% Similarity=0.232 Sum_probs=137.6
Q ss_pred HHHHHHHHHHhhhhhhcc-cchHHHhHhhhc----cCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHhhH
Q 016350 53 VLVATLSSFLFGYHLGVV-NEPLESISLDLG----FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCAL 126 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~----~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~ 126 (391)
+..+...-+-..+...-+ .++.-++..+++ +++++. .-+.+.|.--.-+..+++||++|| +|+|+++..|.+
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A--~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGai 100 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHA--TGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAI 100 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhh--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 334444444444433322 233445555555 887776 455666665556889999999999 899999999999
Q ss_pred HHHHHHHHHHhhh--hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCcc--ccchHHHHHHHHHHHHHHHHHHhcccccc
Q 016350 127 PMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF--VRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (391)
Q Consensus 127 ~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (391)
+..+|.++.+.++ +...+.++-++.++|.|..-+....++.|.+|++ +|-...++++++.++|++++|++.+++.+
T Consensus 101 l~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~ 180 (498)
T COG3104 101 LMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAI 180 (498)
T ss_pred HHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHH
Confidence 9999999999985 7889999999999999999999999999999864 36778889999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHhhccc
Q 016350 203 IAGWWRICFWVSIVPAAILCLAMVFCA 229 (391)
Q Consensus 203 ~~~~w~~~f~~~~~~~~~~~~~~~~~~ 229 (391)
..+ |+..|...++-..+.++.++..+
T Consensus 181 ~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 181 NYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred hhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 999 99999998887777666655443
No 131
>PRK12382 putative transporter; Provisional
Probab=99.58 E-value=5.3e-14 Score=128.03 Aligned_cols=152 Identities=16% Similarity=0.150 Sum_probs=128.8
Q ss_pred ccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHH
Q 016350 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (391)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~ 149 (391)
.....|.+.++.+.+ +. ++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (392)
T PRK12382 235 IGTFVSLYFASKGWA--MA--GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHhcCCc--hh--HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 344555566666654 23 56667778888899999999999999999999999998888888888888888888999
Q ss_pred HhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhh
Q 016350 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (391)
Q Consensus 150 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~ 226 (391)
+.|++.+...+.....+.|.+|+++|+++.++.+....+|..++|.+.+.+.+..| |++.|.+.+...++..+..+
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888999999999999999999999999999999999999888 99999988777766655543
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.57 E-value=8.3e-14 Score=126.13 Aligned_cols=162 Identities=12% Similarity=-0.005 Sum_probs=135.5
Q ss_pred HHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh
Q 016350 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (391)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 137 (391)
+..++............|.+.+|+|.++++. |++.+...++..++.++.+++.||+|+|+.+..+.+..++..+..++
T Consensus 212 ~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~--g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T TIGR00902 212 AAVCLIQGAHAAYYGFSAIYWQAAGISASAT--GLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGA 289 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3334334444444556677778889887766 88888899999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHH-HHHHHHHHHHHHhccccccccchhHHHHHHHHH
Q 016350 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (391)
Q Consensus 138 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~ 216 (391)
++|.+.+++.++++|+..+...+....++.+. |+++|+++.++++ ...++|..+++.++|.+.+..+ + ..|++.+.
T Consensus 290 ~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~ 366 (382)
T TIGR00902 290 IEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAI 366 (382)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHH
Confidence 99999999999999999999999999999998 9999999999986 5788999999999999999887 5 55666666
Q ss_pred HHHHHHHH
Q 016350 217 PAAILCLA 224 (391)
Q Consensus 217 ~~~~~~~~ 224 (391)
+.++..+.
T Consensus 367 ~~~~~~~~ 374 (382)
T TIGR00902 367 IAAAAFFL 374 (382)
T ss_pred HHHHHHHH
Confidence 55554433
No 133
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.56 E-value=1.1e-13 Score=125.24 Aligned_cols=150 Identities=19% Similarity=0.279 Sum_probs=124.3
Q ss_pred HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhcc
Q 016350 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGM 155 (391)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~ 155 (391)
.+.+++|.++.+. +++.+.......++.++.|++.||+|||+++..+.++..+......+.++.+.+++.+++.|++.
T Consensus 225 ~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 302 (375)
T TIGR00899 225 LIIHELGLPDKLA--GLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFI 302 (375)
T ss_pred HHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456788877665 77777777777788899999999999999998887776666666667788888888899999999
Q ss_pred chhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccc
Q 016350 156 GLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCA 229 (391)
Q Consensus 156 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~ 229 (391)
+...+....++.|..|+ +++++.++.+....+|..++|.+++.+.+..+ |+..|++.++..++..+...+++
T Consensus 303 g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 303 GILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHheec
Confidence 98888888899998875 56799999999999999999999999988888 89999988887777666665554
No 134
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.55 E-value=2.6e-13 Score=127.41 Aligned_cols=162 Identities=12% Similarity=0.035 Sum_probs=108.0
Q ss_pred ccchHHHhHhhhccCcchhH---------HHH-HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh
Q 016350 70 VNEPLESISLDLGFNGNTLA---------EGL-VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (391)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~---------~~~-~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 139 (391)
.....|.+.++.|.+..+.. ... ...+..++..++.++.++++||+|||++++.+..+.+++.++.++..
T Consensus 307 ~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 307 VNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred cccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 44457888888888654210 001 12334455667888999999999999999988888777766655432
Q ss_pred h----HHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc---------h
Q 016350 140 N----LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG---------W 206 (391)
Q Consensus 140 ~----~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---------~ 206 (391)
+ ...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|.++++.+.+.+.+..+ +
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 466 (502)
T TIGR00887 387 NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIW 466 (502)
T ss_pred HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccccc
Confidence 1 11111111112222222334556778999999999999999999999999999999988876321 1
Q ss_pred hHHHHHHHHHHHHHHHHHhhccccc
Q 016350 207 WRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 207 w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
+...|++.++..++..+..+++||+
T Consensus 467 ~~~~~~i~~~~~~~~~i~~~~lpEt 491 (502)
T TIGR00887 467 MGHVLEIFALFMFLGILFTLLIPET 491 (502)
T ss_pred chHHHHHHHHHHHHHHHHheEeccC
Confidence 4566777666666665556778987
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.55 E-value=4.2e-14 Score=129.48 Aligned_cols=158 Identities=15% Similarity=0.133 Sum_probs=130.0
Q ss_pred cccchHHHhHhhhccCcchh--HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHH
Q 016350 69 VVNEPLESISLDLGFNGNTL--AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (391)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~--~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~ 146 (391)
...+.++.+.++.+.+.++. ..+.+.+++.++..++.+..|+++||+|||+.+..+..+..++.+...+.++.+.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGI 316 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 34455666656543332221 2356667777888899999999999999999999998888888887788888888889
Q ss_pred HHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhh
Q 016350 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (391)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~ 226 (391)
.+++.|++.+...+....++.+..|+++||+.+++.+....+|..+||.+++.+.+..+ |++.|++.++..++..+..+
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 317 LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998888 89999998877777665554
Q ss_pred c
Q 016350 227 F 227 (391)
Q Consensus 227 ~ 227 (391)
+
T Consensus 396 ~ 396 (408)
T PRK09874 396 N 396 (408)
T ss_pred H
Confidence 3
No 136
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.55 E-value=5.9e-14 Score=127.73 Aligned_cols=159 Identities=18% Similarity=0.130 Sum_probs=118.8
Q ss_pred HHHHHhhhhhhcccchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH--HH
Q 016350 58 LSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA--SI 134 (391)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~--~~ 134 (391)
...+.............|.+. +++|.+.++. ++..+...++..++.++.|+++||+|||+.+..+..+..+.. +.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 303 (394)
T TIGR00883 226 GLVIATTTTFYLITTYLPTYLTQTLGLSANSA--LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLL 303 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 333333334444455666665 6678877666 788888899999999999999999999998876555444333 22
Q ss_pred HHh--hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHH-HHHHHHHHHHHHHhccccccccchhHHHH
Q 016350 135 SAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFI-QIATCLGLMGSLLIGIPVKEIAGWWRICF 211 (391)
Q Consensus 135 ~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~~~w~~~f 211 (391)
..+ .++.+.+++..++.|++.+...+...+++.|.+|+++|+++.++. +.+..+|..++|.+++.+.+..+.|++.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~ 383 (394)
T TIGR00883 304 MALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIG 383 (394)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHH
Confidence 222 246667777889999988889899999999999999999999984 56677889999999999988776577776
Q ss_pred HHHHHHH
Q 016350 212 WVSIVPA 218 (391)
Q Consensus 212 ~~~~~~~ 218 (391)
+......
T Consensus 384 ~~~~~~~ 390 (394)
T TIGR00883 384 YYLAALA 390 (394)
T ss_pred HHHHHHH
Confidence 6655443
No 137
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.55 E-value=9e-14 Score=128.60 Aligned_cols=164 Identities=10% Similarity=0.049 Sum_probs=129.3
Q ss_pred HHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc--chhhHHHHH--hhHHHHHHHH
Q 016350 58 LSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG--VGRRRAFQL--CALPMIIGAS 133 (391)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr--~Grr~~l~~--~~~~~~i~~~ 133 (391)
...++...........+|.+.+++|.+..+. +++.++..++..++.++.|+++|| +++|+.... +.++.+++.+
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~l 325 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKDKGVDEYEA--AFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHL 325 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444456777788888877666 899999999999999999999997 334433333 3444455556
Q ss_pred HHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH
Q 016350 134 ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (391)
Q Consensus 134 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~ 213 (391)
+...+++++.+++.+++.|++.+...+...+++.|.+|++++++.+++++....+|..+||.+++.+.+..+.|++.|++
T Consensus 326 l~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~ 405 (455)
T TIGR00892 326 LCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYA 405 (455)
T ss_pred HHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHH
Confidence 66778899999999999999999999999999999999999999999999999999999999999998876448999988
Q ss_pred HHHHHHHHHH
Q 016350 214 SIVPAAILCL 223 (391)
Q Consensus 214 ~~~~~~~~~~ 223 (391)
.++..++..+
T Consensus 406 ~~~~~li~~~ 415 (455)
T TIGR00892 406 SGSIVVSAGL 415 (455)
T ss_pred hhHHHHHHHH
Confidence 7776655443
No 138
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.55 E-value=1.3e-13 Score=128.20 Aligned_cols=171 Identities=16% Similarity=0.124 Sum_probs=122.7
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHh-HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
+..+++..+.............|.+ .+++|.+..+. ++..+.+.++..++.+++|+++||+|||+.+.....+..++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDA--INTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALII 337 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 3444444444444444455567754 46789887776 78888899999999999999999999998876655444433
Q ss_pred HHH--HHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHH-HHHHHHHhcccccc------
Q 016350 132 ASI--SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKE------ 202 (391)
Q Consensus 132 ~~~--~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~------ 202 (391)
..+ ....++...+.+.+++.|++.............|.+|+++||++.|+.+....+ |..++|.+.|.+.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~ 417 (467)
T PRK09556 338 FTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGT 417 (467)
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccc
Confidence 322 233456666778888888654443333345677999999999999999988786 77899999998888
Q ss_pred ------ccchhHHHHHHHHHHHHHHHHHhh
Q 016350 203 ------IAGWWRICFWVSIVPAAILCLAMV 226 (391)
Q Consensus 203 ------~~~~w~~~f~~~~~~~~~~~~~~~ 226 (391)
..+ |+..|.+..+..++..+..+
T Consensus 418 ~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 418 PIFGYTLTG-WAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred ccccccccC-hHHHHHHHHHHHHHHHHHHH
Confidence 456 99999887666666555444
No 139
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.54 E-value=4.7e-13 Score=125.19 Aligned_cols=160 Identities=19% Similarity=0.086 Sum_probs=115.0
Q ss_pred cccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh--hH--HHH
Q 016350 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NL--IGM 144 (391)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~--~~l 144 (391)
......|.+.++.|.+.+.. ++......+...++.++.|+++||+|||++++.+..+.+++.++.+... +. ...
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~--~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIA--LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHHHHHHHHHHcCCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 33445688888899876655 5666667788889999999999999999999999999888887765432 11 122
Q ss_pred HHHHHHhhhccch-hhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcc------ccccccchhHHHHHHHHHH
Q 016350 145 LLGRFVVGTGMGL-GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI------PVKEIAGWWRICFWVSIVP 217 (391)
Q Consensus 145 ~~~r~l~G~~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~------~l~~~~~~w~~~f~~~~~~ 217 (391)
..+-++.+.+.+. ..+....++.|.+|+++|++++++......+|..+++.+.+ ++.+..+ |++.|++.++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~ 445 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCM 445 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHH
Confidence 2233344443333 23567889999999999999999999998888888765544 3345566 78888887766
Q ss_pred HHHHHHHh-hccccc
Q 016350 218 AAILCLAM-VFCAES 231 (391)
Q Consensus 218 ~~~~~~~~-~~~~e~ 231 (391)
.++..+.. ++.||+
T Consensus 446 ~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 446 GVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHhccccC
Confidence 66655544 456666
No 140
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.54 E-value=1.4e-13 Score=128.68 Aligned_cols=176 Identities=15% Similarity=0.012 Sum_probs=128.3
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+....+..+.............|.+.+++|.+..+. ++......++..++.++.|+++||+|||+.+..+.++.+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 286 FLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHA--FLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 333334444433344445556788888999887555 788888889999999999999999999999999988888877
Q ss_pred HHHHhh-----h------hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc
Q 016350 133 SISATT-----R------NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 133 ~~~~~~-----~------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (391)
++.++. + +...+....++.+.......+....++.|.+|+++|++++++.+....+|..+++.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766521 1 23333333333332222333556677899999999999999999999999999999999888
Q ss_pred cccchhHHHHHHHHHHHHHHHHHh-hccccc
Q 016350 202 EIAGWWRICFWVSIVPAAILCLAM-VFCAES 231 (391)
Q Consensus 202 ~~~~~w~~~f~~~~~~~~~~~~~~-~~~~e~ 231 (391)
+..+ |++.|++.++.+++..+.. ++.||+
T Consensus 444 ~~~~-~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 444 ESIG-VGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HhcC-ccceehhHHHHHHHHHHHHheecccC
Confidence 8777 8999988877776665554 445665
No 141
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.52 E-value=5.4e-13 Score=121.25 Aligned_cols=162 Identities=17% Similarity=0.154 Sum_probs=124.8
Q ss_pred hhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh-hHHHH
Q 016350 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-NLIGM 144 (391)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-~~~~l 144 (391)
.........|.+.+++|.+.++. ++..+.+.++..++.+..|++.||+|||+.+..+..+..++.++....+ +...+
T Consensus 220 ~~~~~~~~lp~~l~~~g~s~~~a--g~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 297 (393)
T PRK09705 220 GYASLIAWLPAFYIEIGASAQYS--GSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL 297 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhhh--hHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 33334456777777888887766 8999999999999999999999999999999988887777766554323 32222
Q ss_pred HHHHHHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHH
Q 016350 145 LLGRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (391)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~ 223 (391)
.-++.|++.+...+.......+.++ +++|++..++.+....++..++|.+.+++.+..|.|...|.+.++..+...+
T Consensus 298 --~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 298 --WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred --HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 2346688888888877777777775 5789999999999999999999999999999877688888887766666554
Q ss_pred H-hhccccc
Q 016350 224 A-MVFCAES 231 (391)
Q Consensus 224 ~-~~~~~e~ 231 (391)
. ..+.||+
T Consensus 376 ~~~~~~~~~ 384 (393)
T PRK09705 376 ITLRFAPAR 384 (393)
T ss_pred HHHHhcccc
Confidence 4 4556665
No 142
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.52 E-value=7.3e-13 Score=120.12 Aligned_cols=310 Identities=17% Similarity=0.201 Sum_probs=199.6
Q ss_pred HHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHH----HHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMC----LGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~----~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i 130 (391)
...+-.+..++......+..+.....++.+....+ +...... .+...+.++..|.++||||||..+....+...+
T Consensus 26 ~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~-~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l 104 (463)
T KOG2816|consen 26 LLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLEN-GLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTIL 104 (463)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhcccccCccchh-hhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHH
Confidence 33444445555555555566666666665443332 4444444 567788999999999999999999999999888
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhccc--hhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 131 GASISATTRNLIGMLLGRFVVGTGMG--LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 131 ~~~~~~~~~~~~~l~~~r~l~G~~~g--~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
..+...+.. ++.+ + +.|+..+ .......++++|....++|....|+.+.....+..++|.+++.+....+ .-
T Consensus 105 ~~~~~~~~~-~~~~-~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~-~a 178 (463)
T KOG2816|consen 105 PALCLLFQG-YWFF-L---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG-IA 178 (463)
T ss_pred hHHHHHHHH-HHHh-h---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC-ch
Confidence 888777766 3333 3 5554433 3456778899999999999999999999999999999999999988877 67
Q ss_pred HHHHHHHHHHHHHHHHh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccch
Q 016350 209 ICFWVSIVPAAILCLAM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHF 287 (391)
Q Consensus 209 ~~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (391)
.+|.+..+..++..+.. .++||+-. +++.++ ...+......... ....+......+.-.+|..
T Consensus 179 ~~f~ia~~~~~~~~~y~~~~l~Esl~----~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~r~~ 242 (463)
T KOG2816|consen 179 LVFLIAAASGILSLLYMLLFLPESLQ----EKERSD--ATLRELTPGSLDS----------SHVADAFQSLTKVGPDRLL 242 (463)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccC----cccccc--ccccccCCCcccc----------hhhhhhhhhhcccCCCccc
Confidence 88888777777765544 66888732 111110 0000000000000 0000111111111123334
Q ss_pred hHHHHHHHHHHHHhhhchh-hHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHH-HHHhhhCchHHHHHHHHHHHHHH
Q 016350 288 RVVFIGSTLFALQQLSGIN-AIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAM-VLMDKLGRKALLQWSFFSMAVSM 365 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~ 365 (391)
..+.+..++.......... ..++|+...++....+.+.......+...++.++.. .+...++.|+.+..|...-.+..
T Consensus 243 l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~ 322 (463)
T KOG2816|consen 243 LLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQL 322 (463)
T ss_pred hHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHH
Confidence 4434444444333333223 446666666676666677777777788888877766 67777888888889999999999
Q ss_pred HHHHHHhccCCCCchHhHHhhh
Q 016350 366 AIQVAASSSYIPGSASLYLSVG 387 (391)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~ 387 (391)
+++.+....+..+....+..+.
T Consensus 323 ~~~af~~~~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 323 LLFAFATETWMMFAAGVVVALA 344 (463)
T ss_pred HHHHHhccchhhhHHHHHHHhh
Confidence 9999998887666555544443
No 143
>PRK03699 putative transporter; Provisional
Probab=99.52 E-value=3e-13 Score=123.02 Aligned_cols=168 Identities=12% Similarity=0.065 Sum_probs=132.4
Q ss_pred HHHHhhhhhhcccchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh
Q 016350 59 SSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (391)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 137 (391)
..++.......+....|.+. +++|.+.++. +++.+.+.++..++.+..|+++||+|||+++.....+..+...+...
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~ 290 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKFGMSLEDA--GNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVN 290 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHh--hHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 33333333333445677666 5679887776 88899999999999999999999999999998888777777777777
Q ss_pred hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHH
Q 016350 138 TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (391)
Q Consensus 138 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~ 217 (391)
.++...+.+..++.|++.+..++...++..|..| +++++..+.......+|..++|.+.+.+.+..+ |+..+++.++.
T Consensus 291 ~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~ 368 (394)
T PRK03699 291 TDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFG-LQAALLTANGL 368 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-chhhhhhhHHH
Confidence 7787777778889999888888888888888775 456788888888899999999999999999888 89998887777
Q ss_pred HHHHHHHhhcccc
Q 016350 218 AAILCLAMVFCAE 230 (391)
Q Consensus 218 ~~~~~~~~~~~~e 230 (391)
.++..+....+++
T Consensus 369 ~~~~~~~~~~~~~ 381 (394)
T PRK03699 369 YAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 7666555555443
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.51 E-value=3.8e-13 Score=121.84 Aligned_cols=150 Identities=13% Similarity=0.120 Sum_probs=121.9
Q ss_pred chHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 016350 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (391)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 151 (391)
..+|.+.++.|.+.++. ++..+.+.++..+++++.|++.||+|+|+++..+..+..++.+... + ........++.
T Consensus 221 ~~lp~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~ 295 (381)
T PRK03633 221 GLMPLYLNHQGMSDASI--GFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHH
Confidence 45677778888876665 8888899999999999999999999999999888888777665443 2 23344567788
Q ss_pred hhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhc
Q 016350 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVF 227 (391)
Q Consensus 152 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~ 227 (391)
|++.+...|.....+.|..|+++++...+..+...++|..+||.+++.+.++.+ |++.|.+.+...++..+..+.
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHh
Confidence 887777888899999999998888888888888999999999999999999888 899998877777665554443
No 145
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.51 E-value=1.8e-13 Score=124.62 Aligned_cols=170 Identities=19% Similarity=0.152 Sum_probs=118.5
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhH--HHH------H
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRR--AFQ------L 123 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~--~l~------~ 123 (391)
+....+..+.............|.+. +++|.+..+. +++.+...++..++.++.|+++||+|||+ ... .
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 294 (399)
T TIGR00893 217 VWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEA--GFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAII 294 (399)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHH
Confidence 33444444555555555555666554 5578776665 88899999999999999999999999996 111 1
Q ss_pred hhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc
Q 016350 124 CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (391)
Q Consensus 124 ~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (391)
+.++..+........++....+....+.+.+.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~ 373 (399)
T TIGR00893 295 AGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT 373 (399)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC
Confidence 111112222222223344444444455555555 7788899999999999999999999999999999999999999987
Q ss_pred cchhHHHHHHHHHHHHHHHHHh
Q 016350 204 AGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 204 ~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
.+.|+..|++.++..++..+..
T Consensus 374 ~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 374 TGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred CCchhHHHHHHHHHHHHHHHHH
Confidence 7657888888777666655444
No 146
>PRK09952 shikimate transporter; Provisional
Probab=99.51 E-value=5.2e-13 Score=123.02 Aligned_cols=158 Identities=15% Similarity=0.100 Sum_probs=113.6
Q ss_pred chHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh---h-hhHHHHHH
Q 016350 72 EPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT---T-RNLIGMLL 146 (391)
Q Consensus 72 ~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~---~-~~~~~l~~ 146 (391)
...|. +.+++|.+.+.. ..+.....+...++.++.|+++||+|||++++.+.++..++.+.... . ++...+++
T Consensus 271 ~~~~~y~~~~~g~s~~~~--~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T PRK09952 271 AFALNYSTQNLGLPRELF--LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFF 348 (438)
T ss_pred HHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 34444 456678776543 34445556666788899999999999999998887766555443322 1 23444455
Q ss_pred HHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHH-HHHHHHHHHHHHhcccccccc-chhHHHHHHHHHHHHHHHHH
Q 016350 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIA-GWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~-~~w~~~f~~~~~~~~~~~~~ 224 (391)
..++.|++.+...+...+++.|.+|++.|+.+.++.+ .+..+|..++|.+.+.+.+.. +.|+..+.+.++..++..+.
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT 428 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 6677788888888888899999999999999988854 445588899999999887743 33888888777777776666
Q ss_pred hhccccc
Q 016350 225 MVFCAES 231 (391)
Q Consensus 225 ~~~~~e~ 231 (391)
.+..+|+
T Consensus 429 ~~~~~~~ 435 (438)
T PRK09952 429 ALLMKDN 435 (438)
T ss_pred HHHcccc
Confidence 6666654
No 147
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.50 E-value=2.7e-13 Score=123.95 Aligned_cols=140 Identities=21% Similarity=0.179 Sum_probs=112.1
Q ss_pred chHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHH-HHHhhhhHHHHHHHHH
Q 016350 72 EPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-ISATTRNLIGMLLGRF 149 (391)
Q Consensus 72 ~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~-~~~~~~~~~~l~~~r~ 149 (391)
...|. +.+++|.+.++. +++.+.+.++..++.++.|++.||+|||+.+..+..+..+..+ .....++.+.+.+..+
T Consensus 259 ~~~~~~~~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (405)
T TIGR00891 259 DLLPTYLKADLGLSPHTV--ANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLF 336 (405)
T ss_pred hhhHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHH
Confidence 34454 445688877766 8899999999999999999999999999998888776533332 3334456666677777
Q ss_pred HhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH
Q 016350 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (391)
Q Consensus 150 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~ 213 (391)
+.|+..+...+....++.|.+|+++|++++|+.+....+|..++|++++.+.+..|.|+..+..
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 337 FQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 7787777777788889999999999999999999999999999999999999887756665544
No 148
>TIGR00895 2A0115 benzoate transport.
Probab=99.49 E-value=4.9e-13 Score=121.91 Aligned_cols=134 Identities=19% Similarity=0.174 Sum_probs=108.2
Q ss_pred hhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHH
Q 016350 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGM 144 (391)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l 144 (391)
..........|.+.+++|.+.++. ++..+...++..++.++.|+++||+|||+.+...........++....++...+
T Consensus 264 ~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (398)
T TIGR00895 264 VGVYFLTNWLPKLMVELGFSLSLA--ATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLL 341 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 333344556778888889887666 788999999999999999999999999955544444333333333335677777
Q ss_pred HHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccc
Q 016350 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (391)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (391)
++..++.|++.+...+...+++.|.+|+++|+++.|+......+|..++|.++|.+
T Consensus 342 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 342 LLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 88899999999999999999999999999999999999999999999999998865
No 149
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.47 E-value=7.6e-13 Score=120.73 Aligned_cols=157 Identities=12% Similarity=0.069 Sum_probs=119.1
Q ss_pred hhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHH-HhhHHHHHHHHHHHh-----hh
Q 016350 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ-LCALPMIIGASISAT-----TR 139 (391)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~i~~~~~~~-----~~ 139 (391)
.........|.+.+++|.+.++. +++.+.+.++..++.+..|+++||+|||+.+. .+.+..+++.+.... .+
T Consensus 237 ~~~~~~~~~p~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~ 314 (402)
T TIGR00897 237 GLFGFAVFLPMFVAELGFSTSEW--LQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGH 314 (402)
T ss_pred HHHHHHHHHHHHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 33334556788888899887766 78888889999999999999999999988764 333334443333322 24
Q ss_pred hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHH
Q 016350 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (391)
Q Consensus 140 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~ 219 (391)
+.+..++..++.|++.+...+. ...+.|.. +++|+++.|+.+....+|..++|.+++.+.+..| |+..|++.++..+
T Consensus 315 ~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~ 391 (402)
T TIGR00897 315 SFAVALIIAIALGIFLAGYVPL-AAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFG-AIGVVWIFAALYV 391 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-hHHHHHHHHHHHH
Confidence 5667777888899888776544 45667765 4689999999999999999999999999999888 8899888877776
Q ss_pred HHHHHhhc
Q 016350 220 ILCLAMVF 227 (391)
Q Consensus 220 ~~~~~~~~ 227 (391)
+..+...|
T Consensus 392 i~~~~~~~ 399 (402)
T TIGR00897 392 VSAFLTAF 399 (402)
T ss_pred HHHHHHHH
Confidence 66555544
No 150
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.47 E-value=5.3e-13 Score=122.45 Aligned_cols=158 Identities=13% Similarity=0.079 Sum_probs=132.3
Q ss_pred cchHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHH
Q 016350 71 NEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149 (391)
Q Consensus 71 ~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~ 149 (391)
....|.+.++ +|.+.... |++.+.+.++..++.++.+++.||.++++.+..+.++.+++.++..+.++.....++.+
T Consensus 243 ~~~~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQMGAAQI--GLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCCChhHh--HHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 4456767666 88876665 89999999999999999999999988888888888888888888888888888888899
Q ss_pred HhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHH-HHHHhhcc
Q 016350 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI-LCLAMVFC 228 (391)
Q Consensus 150 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~-~~~~~~~~ 228 (391)
+.|++.+...+...+++.|..|++.||++.++++....+|..+|+.+.+.+.+..+ ++..+...+...++ ..+....+
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-PVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-hhhHHHHHHHHHHHHHHHHHHhc
Confidence 99998888888888899999999999999999999999999999999999999887 67777765555444 44444556
Q ss_pred ccc
Q 016350 229 AES 231 (391)
Q Consensus 229 ~e~ 231 (391)
+|.
T Consensus 400 ~~~ 402 (417)
T PRK10489 400 GEL 402 (417)
T ss_pred ccc
Confidence 665
No 151
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.47 E-value=4.5e-13 Score=125.88 Aligned_cols=143 Identities=16% Similarity=0.071 Sum_probs=111.4
Q ss_pred cchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh--hhHHHHHHH
Q 016350 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT--RNLIGMLLG 147 (391)
Q Consensus 71 ~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~--~~~~~l~~~ 147 (391)
...+|.+. +++|.+..+. +++.+.+.++..++.++.|+++||+|||++++.+.++..++.+..... .+.+.+.+.
T Consensus 295 ~~~lp~~l~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTV--ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLL 372 (496)
T ss_pred HHHHHHHHHhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHH
Confidence 45677776 5888887766 899999999999999999999999999999988877766665544333 344444455
Q ss_pred HHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHH
Q 016350 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (391)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~ 216 (391)
.++.+.......+....++.|.+|+++|++++++.+....+|..++|.+++.+.+..+ |+..+...+.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g-~~~~~~~~~~ 440 (496)
T PRK03893 373 LFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD-LGTALASLSF 440 (496)
T ss_pred HHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC-hHHHHHHHHH
Confidence 5554443333445666788999999999999999999999999999999999999888 7877765443
No 152
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.46 E-value=3.1e-12 Score=111.00 Aligned_cols=269 Identities=13% Similarity=0.068 Sum_probs=179.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHH-hhHHHHHHHHHHHhhhh--H-HHHHHHHHHhhhccchhhHH
Q 016350 86 NTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL-CALPMIIGASISATTRN--L-IGMLLGRFVVGTGMGLGPTV 161 (391)
Q Consensus 86 ~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~i~~~~~~~~~~--~-~~l~~~r~l~G~~~g~~~~~ 161 (391)
++..++...++..+..++..|+.|.++|+.|+||..+. ...+..++.++..++++ + +..++.-.+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 33445788888889999999999999999997766555 45555556666666654 4 44455678888998999889
Q ss_pred HHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhc------c----ccc--------cccchhHHHHHHHHHHHHHHHH
Q 016350 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG------I----PVK--------EIAGWWRICFWVSIVPAAILCL 223 (391)
Q Consensus 162 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~------~----~l~--------~~~~~w~~~f~~~~~~~~~~~~ 223 (391)
..+++.+..++++-++..+.-.....+|..+.-++. + ... +... =|..+.+.++..++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~-~ri~~~l~A~W~li~~i 214 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGED-VRITGLLAALWWLLFAL 214 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCcccccc-chhHHHHHHHHHHHHHh
Confidence 999999999988877777665555555544443331 1 000 1122 57788887777776655
Q ss_pred Hh-hccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhh
Q 016350 224 AM-VFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQL 302 (391)
Q Consensus 224 ~~-~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (391)
-. +..++.++-. ....+...+..+++ ..+++++.+.++.....+..+++.-...
T Consensus 215 Pm~~~v~~~~~~~--~~~~~~l~~g~k~L-----------------------~~t~k~i~~~~~i~~FLiA~~~~~DGv~ 269 (438)
T COG2270 215 PMILNVHDAEKIS--SPPPTALRNGFKEL-----------------------KSTFKEIRGRKNLVLFLIARFFYIDGVN 269 (438)
T ss_pred HHHhccccccccc--ccchHHHHHHHHHH-----------------------HHHHHHHhcccchHHHHHHHHHHHhhHH
Confidence 44 4455443200 00001111111111 2234555666777766666666665555
Q ss_pred hchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhccCCCCch
Q 016350 303 SGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSYIPGSA 380 (391)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (391)
........|....++.+..+.........+..++|+++.|++.||+|.|+++.++.++..+.++...+...+...+..
T Consensus 270 til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~ 347 (438)
T COG2270 270 TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWIL 347 (438)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHH
Confidence 555566667776777777777778888899999999999999999999999999988888888777766664444333
No 153
>PRK03545 putative arabinose transporter; Provisional
Probab=99.46 E-value=4e-12 Score=115.60 Aligned_cols=147 Identities=13% Similarity=0.064 Sum_probs=117.5
Q ss_pred HHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHH-HHHhhhhHHHHHHHHHHhhh
Q 016350 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS-ISATTRNLIGMLLGRFVVGT 153 (391)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~-~~~~~~~~~~l~~~r~l~G~ 153 (391)
|.+.+++|.+.++. +++.+.+.++..++.++.|++.||+|||+... +..+..++.. +....++.+.++++.++.|+
T Consensus 230 ~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~ 306 (390)
T PRK03545 230 PFVQQVAGLSENFA--TLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGI 306 (390)
T ss_pred HHHHHhcCCCccHH--HHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 44555578877766 88889999999999999999999999887544 4444444433 34556778888888999999
Q ss_pred ccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhh
Q 016350 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (391)
Q Consensus 154 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~ 226 (391)
+.+...+.....+.|..| ++|++++++++....+|..+|++++|.+.+..+ ++..|++.+++.++..+...
T Consensus 307 ~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 307 AIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHH
Confidence 887777777778888876 678999999999999999999999999999998 89999988877776655543
No 154
>TIGR00898 2A0119 cation transport protein.
Probab=99.45 E-value=2e-12 Score=121.75 Aligned_cols=135 Identities=13% Similarity=0.014 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhH--HHHHHHHHHhhhccchhhHHHHHHHhhcCC
Q 016350 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNL--IGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (391)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 171 (391)
.....+....+.++.+++.||+|||+++..+.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.+|
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 440 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYP 440 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 444556677889999999999999999999999999888887776543 445556677777778888888899999999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccccc
Q 016350 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 172 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
++.|++++|+.+....+|.+++|.+.+ +.+ .+ +...+.+.+...++..+..+++||+
T Consensus 441 ~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~lpet 497 (505)
T TIGR00898 441 TVVRNLGVGVCSTMARVGSIISPFLVY-LGE-KW-LFLPLVLFGGLALLAGILTLFLPET 497 (505)
T ss_pred HHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHHHHHHHcCcCC
Confidence 999999999999999999999999988 433 33 5677777777777777777788887
No 155
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.45 E-value=2.8e-12 Score=116.23 Aligned_cols=148 Identities=14% Similarity=0.068 Sum_probs=121.7
Q ss_pred cchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHH
Q 016350 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (391)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 150 (391)
....|.+.+|.|.+.++. |...+...++..+..++.|++.||+|+|+.+..+.+..+++.++.+.+++.+.+++..++
T Consensus 225 ~~~~~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (382)
T PRK11128 225 YGFSAIYWQAAGYSASTI--GYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQIL 302 (382)
T ss_pred HHHHHHHHHHCCCCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 344566667888876665 888888888889999999999999999999999999999988888889999999999999
Q ss_pred hhhccchhhHHHHHHHhhcCCccccchHHHHHH-HHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHH
Q 016350 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (391)
Q Consensus 151 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~ 223 (391)
.|++.+...+....++.+. +++++++..+..+ ....+|..+||.++|.+.+..+ + ..|+..+...++.++
T Consensus 303 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g-~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG-A-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHHHH
Confidence 9999999888888888887 5666788888886 5667788999999999999887 5 455555555554433
No 156
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.42 E-value=6.8e-12 Score=116.27 Aligned_cols=168 Identities=17% Similarity=0.132 Sum_probs=110.2
Q ss_pred HHHHHHHhhhhhhcccchHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc--hhhHHHH-HhhHHHHHH
Q 016350 56 ATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--GRRRAFQ-LCALPMIIG 131 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~l~-~~~~~~~i~ 131 (391)
..+..+............+|.+.++ .|.+.++. ++....+.++..++.++.|+++||+ |||+... ....+..++
T Consensus 258 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~--~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~ 335 (452)
T PRK11273 258 IAIANVFVYLLRYGILDWSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIA 335 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHH
Confidence 3333333333333344567776655 68876666 7888888899999999999999999 5554322 222333333
Q ss_pred HHHHHh--hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHH-HHHHhccccccccchhH
Q 016350 132 ASISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM-GSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 132 ~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~w~ 208 (391)
.+...+ ..+.....++.++.|.+..........+..|.+|+++||++.|+.+....+|.. .+|.+.+.+.+..| |+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~ 414 (452)
T PRK11273 336 TIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WD 414 (452)
T ss_pred HHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-ch
Confidence 322222 234444445555555543333333345678999999999999999888777754 57999999999888 89
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 016350 209 ICFWVSIVPAAILCLAMV 226 (391)
Q Consensus 209 ~~f~~~~~~~~~~~~~~~ 226 (391)
..|++.+..+++.++...
T Consensus 415 ~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 415 GGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999887776666655443
No 157
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.39 E-value=1.3e-11 Score=113.21 Aligned_cols=179 Identities=16% Similarity=0.147 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHhhhhhhcccch-HHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhh--HHHHHhhHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEP-LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCALP 127 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~ 127 (391)
+.+....++.++..-..+.+... ...-.+++|++..+. ..+.-+..+...+|++++|++.||+|.| ++++.+++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l--~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~ 358 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQL--IVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLIL 358 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH
Confidence 44445555555444333333333 444555899988876 5666667788899999999999999999 899999888
Q ss_pred HHHHHHHHHh--------hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccc
Q 016350 128 MIIGASISAT--------TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (391)
Q Consensus 128 ~~i~~~~~~~--------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 199 (391)
+.+..+...+ .++-+.+.+.-++.|+..|..++...++.+|+.|+++.+..+|++....-....+||++-+.
T Consensus 359 ~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~ 438 (477)
T PF11700_consen 359 WIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGL 438 (477)
T ss_pred HHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776666655 67788899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHhhccccc
Q 016350 200 VKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 200 l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
+.+..+.-|+.+....++.++.+++.++++.+
T Consensus 439 i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 439 ITDATGSQRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHhhccch
Confidence 98877767888887777777777766666554
No 158
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.38 E-value=1.1e-11 Score=114.25 Aligned_cols=168 Identities=22% Similarity=0.185 Sum_probs=111.2
Q ss_pred HHHHHHHhhhhhhcccchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc--hh-hHHHHHhhHHHH--
Q 016350 56 ATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--GR-RRAFQLCALPMI-- 129 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Gr-r~~l~~~~~~~~-- 129 (391)
+.+..+........+...+|.+. +++|.+..+. ++..+.+.++..++.++.|+++||+ ++ |+..........
T Consensus 248 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~ 325 (434)
T PRK11663 248 LSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTA--NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLS 325 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHH--HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHH
Confidence 33333443333444445666666 6678887766 7888999999999999999999999 33 332222111111
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHH
Q 016350 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (391)
Q Consensus 130 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 209 (391)
...+......+...+.+..+..|++...........+.|.+|+++|++++|+.+....+|..++|.+.+.+.+..| |+.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g-~~~ 404 (434)
T PRK11663 326 VGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWH-WTG 404 (434)
T ss_pred HHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc-cHH
Confidence 1111111122333333444555543332233334567899999999999999999999999999999999999888 999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 016350 210 CFWVSIVPAAILCLAMV 226 (391)
Q Consensus 210 ~f~~~~~~~~~~~~~~~ 226 (391)
.|++.++..++..+..+
T Consensus 405 ~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 405 FFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988777766655444
No 159
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=8.6e-12 Score=116.42 Aligned_cols=144 Identities=13% Similarity=0.062 Sum_probs=112.1
Q ss_pred HHHhhhhhhcccchHHHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh
Q 016350 60 SFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT 138 (391)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~ 138 (391)
.++............|.+.+ .+|.++.+. ++....+.++..++.++.|++.||+|||+++..+..+.+++..+..+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 270 SFAGRIGSGMLPFMTPVFLQIGLGFSPFHA--GLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc
Confidence 33333333444456676665 467665555 788888888888888999999999999999999988888877766553
Q ss_pred ---hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 139 ---RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 139 ---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
++...+.+.-++.|++.+...+....++.+..|+++|+.+.++.+....+|..+|+.+++.+.+..+
T Consensus 348 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 348 ALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344455567888898888888888999999999999999999999999999999999887765544
No 160
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.38 E-value=2e-12 Score=116.40 Aligned_cols=131 Identities=15% Similarity=0.128 Sum_probs=115.7
Q ss_pred chHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhh-HHHHHHHHH
Q 016350 72 EPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN-LIGMLLGRF 149 (391)
Q Consensus 72 ~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~-~~~l~~~r~ 149 (391)
...|.+.++ +|.+..+. +++.+.+.++..++.++.+++.||+|||+.+..+..+.+++.....+.++ .+.+++..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHY--GWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWF 309 (365)
T ss_pred HHhHHHHHHHhCCchHHH--HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Confidence 456766665 78776666 89999999999999999999999999999999888888888888877774 888888999
Q ss_pred HhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc
Q 016350 150 VVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (391)
Q Consensus 150 l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (391)
+.|++.+...+....++.|..|+++|+++.++.+....+|..+++.+++.+.+..
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 310 AIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999887643
No 161
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.37 E-value=6.5e-12 Score=115.99 Aligned_cols=177 Identities=16% Similarity=0.186 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch--hhHHHHHhhHHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPM 128 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~ 128 (391)
+.++...++..+......+....+|.+.++.+.+.++. +.+.++..+...++.++.|+++|+.. ++.+..++++..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~a--a~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDA--AFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhh--HHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHH
Confidence 34566666677777777777778999999999988877 89999999999999999999999988 567777888899
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 129 IIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 129 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
+++.+.+.++++++.++...++.|++.|........++.|..+.++-..+.|+.....+++.++||++++.+.+..+.|.
T Consensus 376 gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 376 GLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 99999999999999999999999999999998888899999999999999999999999999999999999998888789
Q ss_pred HHHHHHHHHHHHHHHHhhccc
Q 016350 209 ICFWVSIVPAAILCLAMVFCA 229 (391)
Q Consensus 209 ~~f~~~~~~~~~~~~~~~~~~ 229 (391)
..|+..++..++..+.++..+
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999998888888777776665
No 162
>PRK15075 citrate-proton symporter; Provisional
Probab=99.36 E-value=1.8e-11 Score=112.84 Aligned_cols=138 Identities=18% Similarity=0.088 Sum_probs=98.6
Q ss_pred hhhcccchHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHH-H---Hhhhh
Q 016350 66 HLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI-S---ATTRN 140 (391)
Q Consensus 66 ~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~-~---~~~~~ 140 (391)
....+....|.+.++ +|.+.++. ++....+.++..++.+++|+++||+|||++++.+..+..+.... . ...++
T Consensus 253 ~~~~~~~~~p~~l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (434)
T PRK15075 253 SFYLITVYTPTFGKTVLHLSAADS--LLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPS 330 (434)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 333445567776655 78877665 78888888889999999999999999999988765544332211 1 12234
Q ss_pred HHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHH-HHHHHHHHHHHhccccccccc
Q 016350 141 LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 141 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~ 205 (391)
+..+.+..++.|++.+...+....++.|.+|+++|+++.++... +..++..++|.+.+.+.+..+
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 331 FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 44444555666677777666677889999999999999998644 444556778988888888766
No 163
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.35 E-value=1.2e-10 Score=108.72 Aligned_cols=155 Identities=17% Similarity=0.229 Sum_probs=119.1
Q ss_pred HHHhHhhhccCcchhHHHHHHH-HHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHH---Hhh-hhHHHHHHHH
Q 016350 74 LESISLDLGFNGNTLAEGLVVS-MCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---ATT-RNLIGMLLGR 148 (391)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s-~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~-~~~~~l~~~r 148 (391)
.|.+.+++|.+.++. ++... ...++..++.+++|+++||+|+|+.+..+.++.+++.+.. +.. ++...+.+.-
T Consensus 246 ~~~l~~~~G~s~~~~--g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~ 323 (491)
T PRK11010 246 TTFLIRGVGFDAGEV--GLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAV 323 (491)
T ss_pred HHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 344556788887776 78764 5567899999999999999999998877666555544332 232 3555555566
Q ss_pred HHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhcc
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~ 228 (391)
+++.++.|...+...++..+..+++.+++..++.+....+|..+++.+.|.+.+..| |+..|.+.++.+++..+...++
T Consensus 324 ~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 324 FFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHHH
Confidence 676666666667778888999999999999999999999998888888999998888 9999998888888776666555
Q ss_pred ccc
Q 016350 229 AES 231 (391)
Q Consensus 229 ~e~ 231 (391)
+++
T Consensus 403 ~~~ 405 (491)
T PRK11010 403 RQT 405 (491)
T ss_pred Hhc
Confidence 443
No 164
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.35 E-value=9.8e-12 Score=113.29 Aligned_cols=133 Identities=13% Similarity=0.052 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcC
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVS 170 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~ 170 (391)
|.+.++..+...++.+..|++.||+|||+.+.++..+.+++..+.+.++|.+.+++.++++|++..........+..+..
T Consensus 257 g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 336 (396)
T TIGR00882 257 GYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQF 336 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 78888888888899999999999999999999999988888888788889999999999999987777666777788888
Q ss_pred CccccchHHHH-HHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 016350 171 PPFVRGTYGAF-IQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 171 ~~~~r~~~~~~-~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~ 224 (391)
+++.++...+. .+....+|..+++.++|.+.+..| |+..|.+.++..++..+.
T Consensus 337 ~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 337 DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHHH
Confidence 88888887766 678899999999999999999888 899999877776665443
No 165
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.34 E-value=3.1e-10 Score=100.06 Aligned_cols=294 Identities=12% Similarity=0.071 Sum_probs=177.3
Q ss_pred hHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 016350 73 PLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (391)
Q Consensus 73 ~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 151 (391)
..|.+.+. .|++.++.. .-+.-...-.+....++...+.|..|.|++++.+.+...+...+.-+.++...+-+..++-
T Consensus 26 l~~yL~~~~kn~T~~qv~-~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~y 104 (412)
T PF01770_consen 26 LTPYLTGPDKNFTEEQVN-NEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFY 104 (412)
T ss_pred chHHHcCCccCCCHHHHH-HhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence 44555554 788887764 3445555566778889999999999999999999999999999999999999999999999
Q ss_pred hhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc-hhHHHHHHHHHHHHHHHHHhhcccc
Q 016350 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPAAILCLAMVFCAE 230 (391)
Q Consensus 152 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~w~~~f~~~~~~~~~~~~~~~~~~e 230 (391)
|++.+. ..+.++++-...|+++-.++.+...++.-+|..++.++|-.+....+ ..+...++......+..+..+++|.
T Consensus 105 g~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 105 GLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 997766 45777888888899999999999999999999999998887776432 2566666665555555566677777
Q ss_pred chhHHHHcCCHHHHHHHHH-HHhCCCCchhHHHHhhhcccCCC-C-------ccccchhcccccchhHHHHHHHHHHHHh
Q 016350 231 SPHWLYKKGRTAEAEAEFE-KLLGGSHVKSSLAELSKLDRGDD-G-------DIVKFEELLYGRHFRVVFIGSTLFALQQ 301 (391)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (391)
.++...-+++.++..+..+ +....++..+...+..+.+.... . -..++++..++|......+-..+..
T Consensus 184 ~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~at--- 260 (412)
T PF01770_consen 184 PKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFAT--- 260 (412)
T ss_pred CCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH---
Confidence 6543222222111110000 00000000000000000000000 0 0122344445555544333222222
Q ss_pred hhchhhHHHhHHHHHhhc------CCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHH--HHHHHHHHHHHHHHh
Q 016350 302 LSGINAIFYFSSSVFKSA------GLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWS--FFSMAVSMAIQVAAS 372 (391)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~~ 372 (391)
+++.....|.+...+.- ..-.|..-....+.+.++.+..|++-.+..+..-+..+ .++.+..++++....
T Consensus 261 -cgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~ 338 (412)
T PF01770_consen 261 -CGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTG 338 (412)
T ss_pred -hHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22333444555444433 11246677777888888899999986666654444333 333344444444433
No 166
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.34 E-value=4.1e-11 Score=110.41 Aligned_cols=136 Identities=14% Similarity=0.050 Sum_probs=101.1
Q ss_pred cchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh--hHHHHHHHH
Q 016350 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGR 148 (391)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~l~~~r 148 (391)
...+|.+.++.|.+.++. +...+.+.++..++.++.|++.||+|||+.+..+.++..+..+.....+ +...+.+..
T Consensus 251 ~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (426)
T PRK12307 251 FGLLPTYLAGEGFDTGVV--SNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACL 328 (426)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH
Confidence 445677777778766655 7888888999999999999999999999999988877766655444332 222222222
Q ss_pred HHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHH
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRI 209 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~ 209 (391)
+..+++.....+..+.++.|.+|+++|++++|+......+|..++|.+.+.+.+..+ +..
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g-~~~ 388 (426)
T PRK12307 329 FGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMG-LGA 388 (426)
T ss_pred HHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHccc-HHH
Confidence 222233333344556788999999999999999999999999999999999988777 444
No 167
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.33 E-value=1.6e-11 Score=113.96 Aligned_cols=153 Identities=19% Similarity=0.179 Sum_probs=133.1
Q ss_pred ccchHHHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHH
Q 016350 70 VNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (391)
Q Consensus 70 ~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r 148 (391)
+...+|.+.+ ++|.+.... |++.+.+.+|..+|.+..+++.+|+++++.+..+.++++++.+..+++++.+..++.-
T Consensus 237 ~~aLlPl~a~~~l~~~a~~y--Gll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGY--GLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHH--HHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 3445776664 577765555 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHh
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
++.|++.....+...+.+.+..|++.||+.++++.+....+..+|..+.|.+.+..| -+..+.+.++..++..++.
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHH
Confidence 999999999888889999999999999999999999999999999999999999888 6788877666555444433
No 168
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.32 E-value=4.6e-11 Score=110.48 Aligned_cols=115 Identities=19% Similarity=0.146 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh-hhHHHHHHHHHHhhhccchhhHHHHHHHhhc
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 169 (391)
+++.++..++..++.+++++++||+|+|+++..+..+.+++.+...+. ++.+.+++..++.|++.+...+...++++|.
T Consensus 260 ~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (437)
T TIGR00792 260 SYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADT 339 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 677788889999999999999999999999999998888887777665 4666777788899999999999999999988
Q ss_pred CC-------ccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 170 SP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 170 ~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
.+ ++.+|...++.+....+|..+++.+.+.+.+..|
T Consensus 340 ~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 340 VDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred hhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 65 4567999999999999999999999888766544
No 169
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.32 E-value=2.1e-11 Score=110.88 Aligned_cols=148 Identities=15% Similarity=0.015 Sum_probs=112.3
Q ss_pred hHHHhHhhhccCcchhHHHHHHHHHH-HHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh------hhhHHHHH
Q 016350 73 PLESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT------TRNLIGML 145 (391)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~------~~~~~~l~ 145 (391)
..+.+.+|.|.+.++. |++..... ....++.++.|++.||+|+|+++..+..+.++..+.... .++...+.
T Consensus 230 ~~~~~l~~~G~s~~~i--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWI--GRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 4566667789988777 88877765 466678899999999999999998877665443332221 12333445
Q ss_pred HHHHHhhhccchhhHHHHHHHhhcCCc-cccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHH
Q 016350 146 LGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (391)
Q Consensus 146 ~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~ 223 (391)
....+.+++.+...+.....+.+..++ +++++.+++.+....+|..++|.++|.+.+..| |+..|...++..++..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHH
Confidence 555666777788877777787777776 889999999999999999999999999998888 89999887766665543
No 170
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.32 E-value=3.6e-11 Score=110.80 Aligned_cols=156 Identities=12% Similarity=0.070 Sum_probs=97.6
Q ss_pred cchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH--h--hhhHHHHH
Q 016350 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA--T--TRNLIGML 145 (391)
Q Consensus 71 ~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~--~--~~~~~~l~ 145 (391)
...+|.+. +++|.+.++. ++..++..++..+++++.|+++||+|||+++..+..+.++...... . .++....+
T Consensus 263 ~~~lp~~l~~~~g~s~~~~--~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANVA--SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAF 340 (432)
T ss_pred HHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 44566654 5678876655 6777777778888999999999999999988776655433332111 1 12222222
Q ss_pred HHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHH-HHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 016350 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 146 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~ 224 (391)
..-.+.+++.+...+....+++|++|++.|+++.|+.+....+ .....|.+.+.+.. .+.|...+++.++..++..+.
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHH
Confidence 2222222333344445667889999999999999998765443 23346776665543 343666666665655555555
Q ss_pred hhccc
Q 016350 225 MVFCA 229 (391)
Q Consensus 225 ~~~~~ 229 (391)
.++++
T Consensus 420 ~~~l~ 424 (432)
T PRK10406 420 SLMLH 424 (432)
T ss_pred HHHhh
Confidence 44443
No 171
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.29 E-value=9.4e-11 Score=102.83 Aligned_cols=159 Identities=20% Similarity=0.173 Sum_probs=130.8
Q ss_pred hhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh-hHH
Q 016350 64 GYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-NLI 142 (391)
Q Consensus 64 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-~~~ 142 (391)
.-....+..+-|.+.+..|.+.+.. +++.-.|.++..+|+...|++.|| +.|+.+.....+.++..+...+.. +.+
T Consensus 225 ~g~F~~ftYi~P~L~~v~g~s~~~v--s~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~ 301 (394)
T COG2814 225 TGHFALYTYIRPFLESVAGFSVSAV--SLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPA 301 (394)
T ss_pred cchhhhHHhHHHHHHHccCCCHhHH--HHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHH
Confidence 3344445667788888889988777 899999999999999999999999 999999998888777777666554 555
Q ss_pred HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHH
Q 016350 143 GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (391)
Q Consensus 143 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~ 222 (391)
..++.-++.|+..+.........+++ ..|+.+..+.++.....++|..+|..+|+.+.++.| +....++.++..++..
T Consensus 302 ~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~ 379 (394)
T COG2814 302 LALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALG-YAATGWVGAALLLLAL 379 (394)
T ss_pred HHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHH
Confidence 66666777888887777777777777 446789999999999999999999999999999988 8999999888888776
Q ss_pred HHhhc
Q 016350 223 LAMVF 227 (391)
Q Consensus 223 ~~~~~ 227 (391)
+..+.
T Consensus 380 ~~~~~ 384 (394)
T COG2814 380 LLALL 384 (394)
T ss_pred HHHHH
Confidence 66543
No 172
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.28 E-value=1.9e-10 Score=95.45 Aligned_cols=161 Identities=16% Similarity=0.109 Sum_probs=121.3
Q ss_pred hhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh-------
Q 016350 66 HLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT------- 138 (391)
Q Consensus 66 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~------- 138 (391)
....++..-|++++.+|++.++. ..+.+.-.+|..+ .++.|.+.|++|+|.++.+|.+...+|..+...+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~sq~~l--~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGYSQSQL--NTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred cccchhhhhHHHHHHhCCCHHHH--HHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 44456677899999999988777 6888888899876 5889999999999999999999999998876553
Q ss_pred hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHH
Q 016350 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (391)
Q Consensus 139 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~ 218 (391)
.+++.+.+..++.|.+.+...........+.|| ++||++.|+.-...+++..+-..+...+.+... -+..+.....+.
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~-~~fll~la~~~~ 171 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDP-SSFLLFLAVLPA 171 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCCh-HHHHHHHHHHHH
Confidence 467888888888888877777777777778887 579999999999999986555544443333332 355555555555
Q ss_pred HHHHHHhhccccc
Q 016350 219 AILCLAMVFCAES 231 (391)
Q Consensus 219 ~~~~~~~~~~~e~ 231 (391)
++.++..+++++.
T Consensus 172 ~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 172 VVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHhhheecc
Confidence 5555555555444
No 173
>PRK10054 putative transporter; Provisional
Probab=99.28 E-value=3.9e-11 Score=109.11 Aligned_cols=129 Identities=12% Similarity=0.042 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh-hhHHHHHHHHHHhhhccchhhHHHHHHHhhc
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-RNLIGMLLGRFVVGTGMGLGPTVAALYVTEV 169 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 169 (391)
+++.+.+.+.....+++.|++.||+++|+.+..+..+..++.+...++ ++.+.+++..++.|+|.+...|....++.+.
T Consensus 247 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~ 326 (395)
T PRK10054 247 AVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHI 326 (395)
T ss_pred HHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 677777777777778899999999999999999988888888777664 5777777889999999988888888999999
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHH
Q 016350 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (391)
Q Consensus 170 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~ 221 (391)
.|++.|+++.+..+ ...+|..+||.+++.+.++.+ .+..|++.+....+.
T Consensus 327 ~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~~~~~ 376 (395)
T PRK10054 327 APPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLP-PWSLFVILALAIVAA 376 (395)
T ss_pred CCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcC-hhhHHHHHHHHHHHH
Confidence 99999999988765 455899999999999999888 567777654444443
No 174
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.27 E-value=5.8e-11 Score=106.59 Aligned_cols=136 Identities=18% Similarity=0.076 Sum_probs=106.8
Q ss_pred ccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHH
Q 016350 70 VNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV-GRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (391)
Q Consensus 70 ~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r 148 (391)
....+|.+.++.|.+.++. +++.+.+.++..++.++.|++.||+ +||+.+..+..+.+++.+...+.++..... .-
T Consensus 216 ~~~~lp~~~~~~g~~~~~~--g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 292 (355)
T TIGR00896 216 LIGWLPAILISHGASAATA--GSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WA 292 (355)
T ss_pred HHHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HH
Confidence 3446787778888876666 8999999999999999999999999 567777778888888777776665433222 45
Q ss_pred HHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
++.|++.+...+.....+.+..+ +++++...++.+....+|..++|.+.+.+.++.+.|.
T Consensus 293 ~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 293 LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 77899999998887777765554 5667889999888888899999999999988776443
No 175
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=6e-11 Score=109.56 Aligned_cols=159 Identities=18% Similarity=0.142 Sum_probs=103.5
Q ss_pred ccchHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHH---HHHHHHHh--hhhHHH
Q 016350 70 VNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI---IGASISAT--TRNLIG 143 (391)
Q Consensus 70 ~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---i~~~~~~~--~~~~~~ 143 (391)
.....|.+.++ .|.+..+. ++....+.++..++.+.+|+++||+|+++....+..... ++.+.... ..+.+.
T Consensus 270 ~~~~~p~~l~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T TIGR00712 270 VLDWSPTYLKEVKHFALDKS--SWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV 347 (438)
T ss_pred HHHhHHHHHHHccCCChhhH--HHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 33456666654 67776665 788888999999999999999999975432222322221 11121112 123343
Q ss_pred HHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHH-HHHHHHhccccccccchhHHHHHHHHHHHHHHH
Q 016350 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG-LMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (391)
Q Consensus 144 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~ 222 (391)
..+.-++.|++.............|.+|+++|+++.|+.+....+| ..++|.+.+.+.++.| |...|++.....++..
T Consensus 348 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~ 426 (438)
T TIGR00712 348 DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAV 426 (438)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHH
Confidence 3444455555433222222345789999999999999998877766 5789999999999888 8999887666555544
Q ss_pred HH-hhccccc
Q 016350 223 LA-MVFCAES 231 (391)
Q Consensus 223 ~~-~~~~~e~ 231 (391)
+. ..+.||+
T Consensus 427 ~~~~~~~~~~ 436 (438)
T TIGR00712 427 ILLIVVMIGE 436 (438)
T ss_pred HHHHHHHhhc
Confidence 43 4556664
No 176
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.27 E-value=1.4e-10 Score=101.50 Aligned_cols=158 Identities=13% Similarity=0.126 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHHHhHhh---hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLESISLD---LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 127 (391)
+.+.+..++.+.............+.+.++ +|.++++. ++..+.+..+..++.+..+++.||+|+|+++..+..+
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a--~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l 217 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQA--AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFL 217 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 334444455555443444445555655543 57777766 8999999999999999999999999999999888888
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchh
Q 016350 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (391)
Q Consensus 128 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (391)
..++.++....++... ..+-++.|++.+..+|...+...+..|++ .+++.++. ....+|..+.|.+.|.+.+..+ .
T Consensus 218 ~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g-~ 293 (310)
T TIGR01272 218 AVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG-I 293 (310)
T ss_pred HHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc-c
Confidence 8877766655554332 33556889999999999999888888754 56666765 4566889999999999988777 6
Q ss_pred HHHHHHH
Q 016350 208 RICFWVS 214 (391)
Q Consensus 208 ~~~f~~~ 214 (391)
+..|++.
T Consensus 294 ~~a~~v~ 300 (310)
T TIGR01272 294 QLAFALP 300 (310)
T ss_pred hHHHHHH
Confidence 7777643
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.26 E-value=7.5e-11 Score=109.84 Aligned_cols=152 Identities=12% Similarity=-0.003 Sum_probs=105.2
Q ss_pred hHHHh-HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhh-------HHHHHhhHHHHHHHHHHHhhhhHHHH
Q 016350 73 PLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR-------RAFQLCALPMIIGASISATTRNLIGM 144 (391)
Q Consensus 73 ~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~i~~~~~~~~~~~~~l 144 (391)
.+|.+ .+++|.+..+. +++.+++.++..++.+++|+++||+||| .......++.++..++....++.+..
T Consensus 274 ~~p~~l~~~~g~s~~~a--~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~ 351 (476)
T PLN00028 274 IIAEYFYDRFGLSLETA--GAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAA 351 (476)
T ss_pred HHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHH
Confidence 34544 56678887766 8889999999999999999999999976 23333344444444455556666665
Q ss_pred HHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 016350 145 LLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 145 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~ 224 (391)
++.-++.+++.+...+....++.+.. +++||.+.|+.+.+..+|..+++.+.+ .....+ |+..|++.+++.++..+.
T Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~-y~~~f~~~~~~~~i~~~~ 428 (476)
T PLN00028 352 IVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYS-TETGISLMGVMIIACTLP 428 (476)
T ss_pred HHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCcc-HhhHHHHHHHHHHHHHHH
Confidence 66666666666555555566666765 478999999998887788777776643 222334 899998888777776666
Q ss_pred hhccc
Q 016350 225 MVFCA 229 (391)
Q Consensus 225 ~~~~~ 229 (391)
.++.+
T Consensus 429 ~~~~~ 433 (476)
T PLN00028 429 VAFIH 433 (476)
T ss_pred HHhee
Confidence 65554
No 178
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.25 E-value=1.2e-11 Score=111.93 Aligned_cols=154 Identities=18% Similarity=0.185 Sum_probs=106.1
Q ss_pred HHHHHHHHhhhhhhcccchHHHh-HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch-hhHHHH-Hhh-HHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-RRRAFQ-LCA-LPMII 130 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~l~-~~~-~~~~i 130 (391)
.+.+..+.............|.+ .+++|.+..+. ++..+.+.++..++.++.|++.||.+ ||+... ... ....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~ 297 (379)
T TIGR00881 220 YISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKA--SWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIV 297 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence 33334444343333344455554 45678877666 88899999999999999999999864 333222 222 11222
Q ss_pred HHHHHHh--hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhH
Q 016350 131 GASISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWR 208 (391)
Q Consensus 131 ~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~ 208 (391)
+...... ..+....++..++.|+......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..| |+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-~~ 376 (379)
T TIGR00881 298 SLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG-WA 376 (379)
T ss_pred HHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc-cc
Confidence 2222222 33555666677777876666666667788999999999999999999999999999999999999888 87
Q ss_pred HHH
Q 016350 209 ICF 211 (391)
Q Consensus 209 ~~f 211 (391)
+.|
T Consensus 377 ~~f 379 (379)
T TIGR00881 377 GAF 379 (379)
T ss_pred ccC
Confidence 654
No 179
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.25 E-value=1.5e-10 Score=100.59 Aligned_cols=172 Identities=19% Similarity=0.190 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHH-HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcc--hhhHHHHH-hhH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGV--GRRRAFQL-CAL 126 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~l~~-~~~ 126 (391)
+.++.++++.++.+..+..+.--.| .+.|..|.+..+. ++..+.|-++...|.+++|+++||+ |||....+ .++
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a--~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~ 329 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKA--NWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFML 329 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHH--HHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 5677888888888888888777777 4556678877777 7999999999999999999999994 67755444 444
Q ss_pred HHHHHHHHHHhhh--hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHH-HHHHHHHhccccccc
Q 016350 127 PMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL-GLMGSLLIGIPVKEI 203 (391)
Q Consensus 127 ~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~ 203 (391)
...++.+..-.++ |+....++-++.|+..-+..-.......|..|++--|++.|+.+.+..+ |...+....+.+.+.
T Consensus 330 ~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 330 LITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred HHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 4444444444554 5577888889999887666666667789999999999999999988888 899999999999888
Q ss_pred cchhHHHHHHHHHHHHHHHHHh
Q 016350 204 AGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 204 ~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
.| |...|++..+.+++..++.
T Consensus 410 ~g-W~g~Fi~~~~~a~l~~lll 430 (448)
T COG2271 410 WG-WDGGFIVLSIAALLAILLL 430 (448)
T ss_pred CC-CcchHHHHHHHHHHHHHHH
Confidence 88 9999988766666655544
No 180
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.25 E-value=1.2e-10 Score=106.52 Aligned_cols=162 Identities=17% Similarity=0.097 Sum_probs=106.0
Q ss_pred HHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHH-HHHhhHHHHHHHHH
Q 016350 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA-FQLCALPMIIGASI 134 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~i~~~~ 134 (391)
..+..+........+...+|.+.++++.+.+..+.++..+...++..++.++.|+++||++||+. ......+.+++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~ 326 (412)
T TIGR02332 247 YTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL 326 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH
Confidence 33333444444444566788888876432222333788899999999999999999999997774 34444444443332
Q ss_pred HHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH
Q 016350 135 SATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVS 214 (391)
Q Consensus 135 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~ 214 (391)
....++....+++-.+.++|.....+.......|.+|+++|+++.|+.+....+|..++|.+.+.+.+..+.|++.|++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~ 406 (412)
T TIGR02332 327 ASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFV 406 (412)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHH
Confidence 22222222222222233333333333444555778999999999999999999999999999999998775589888776
Q ss_pred HHH
Q 016350 215 IVP 217 (391)
Q Consensus 215 ~~~ 217 (391)
++.
T Consensus 407 ~~~ 409 (412)
T TIGR02332 407 AAL 409 (412)
T ss_pred HHH
Confidence 554
No 181
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.24 E-value=3.6e-10 Score=102.79 Aligned_cols=145 Identities=14% Similarity=0.020 Sum_probs=112.9
Q ss_pred HHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 016350 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (391)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 153 (391)
.|.+.+++|.+.++. +++...+.++..++.++.+++.||.+++..+...........++....++.+.+.+..++.|+
T Consensus 240 ~p~~~~~~g~s~~~~--g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~ 317 (394)
T PRK10213 240 RPVYMNLAGFGVDGL--TLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHhcCCChhHH--HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 477778889887766 888999999999999999999999654443443333334434444556677778888999999
Q ss_pred ccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHH
Q 016350 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILC 222 (391)
Q Consensus 154 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~ 222 (391)
+.+...+...+++.+..| +++++..+.......+|..+|+.++|.+.+..| ++..+...++..++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g-~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG-LTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-hhhHHHHHHHHHHHHH
Confidence 999999888888888887 557788888888889999999999999999888 7888887766554443
No 182
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.23 E-value=1e-10 Score=101.69 Aligned_cols=155 Identities=16% Similarity=0.184 Sum_probs=133.9
Q ss_pred HHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 016350 75 ESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (391)
Q Consensus 75 ~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 153 (391)
..+.+ ++|++..+. .++.....+..++|++++|++.||+|.|+++.+++++..+.++..-+...-..+.++-.+.|.
T Consensus 276 ~~fg~~~~gls~~~l--ll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~ 353 (438)
T COG2270 276 GVFGAADLGLSSTEL--LLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGT 353 (438)
T ss_pred HHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHH
Confidence 34444 899987777 677777788889999999999999999999999999999999988887777777888899999
Q ss_pred ccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccccc
Q 016350 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 154 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
..|+.+....++.++..|+++-++.+|+++...-.+..+||.+-+.+.+..+.-|.-+....++.++.++..+++|++
T Consensus 354 s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 354 SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999999999999999888877666777777666666666666766654
No 183
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.23 E-value=2.4e-10 Score=102.97 Aligned_cols=176 Identities=20% Similarity=0.270 Sum_probs=133.8
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhc-cCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLG-FNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
+....+..++.+.....+....+.+.+|.| .+.+.. +.+.++..++-...-...+++..|+|.|+++.++.+..++=
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~--g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTI--GILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVR 286 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 334444555666666666667777788887 554444 66667777788888899999999999999999999999998
Q ss_pred HHHHHhh-hhHHHHHH----HHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHH-HHHHHHHHHHHhccccccccc
Q 016350 132 ASISATT-RNLIGMLL----GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 132 ~~~~~~~-~~~~~l~~----~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~~~ 205 (391)
..+.+.. ++.+...+ ...++|+..+........++.+..|++.|+++.+++.. ..++|..+|..++|++.+..+
T Consensus 287 ~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 287 WLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred HHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 8888877 55444333 35679999999999999999999999999999999875 578999999999999998765
Q ss_pred h-----hHHHHHHHHHHHHHHHHHh-hcccc
Q 016350 206 W-----WRICFWVSIVPAAILCLAM-VFCAE 230 (391)
Q Consensus 206 ~-----w~~~f~~~~~~~~~~~~~~-~~~~e 230 (391)
. |...+.+.++..++..+++ .+++|
T Consensus 367 ~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 367 ARGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 2 4455556555555554444 33444
No 184
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.22 E-value=4.9e-10 Score=102.52 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=110.0
Q ss_pred HHHh-HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh-----hhHHHHHHH
Q 016350 74 LESI-SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-----RNLIGMLLG 147 (391)
Q Consensus 74 ~~~i-~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-----~~~~~l~~~ 147 (391)
.|.+ .+++|.++.+. ++......++..++.++.|+++||+|+|+.+..+..+..++.++..+. +++..+++.
T Consensus 238 ~p~~~~~~~g~~~~~~--g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 238 SPVILISGEQLSSYEY--GLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred hHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 4544 56678876655 777777778889999999999999999999999888877777766553 356667788
Q ss_pred HHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHH
Q 016350 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (391)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~ 221 (391)
-++.|++.+...+......... ++++||+..+..+....+|..+|+.+++.+.+..+ +....+..++..++.
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG-NGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc-hHHHHHHHHHHHHHH
Confidence 8999999888776665555443 45889999999999999999999999999988877 444444444333333
No 185
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.21 E-value=3e-10 Score=103.52 Aligned_cols=151 Identities=11% Similarity=-0.001 Sum_probs=114.7
Q ss_pred chHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHH
Q 016350 72 EPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (391)
Q Consensus 72 ~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 150 (391)
..+|.+.++.+.++.+. +++.+...++...+..+.+++.| |++.|+.+..+..+.+++.++.+++++++.+.+..++
T Consensus 229 ~~~p~~~~~~~~~~~~~--g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAV--KWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcCCchHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 35677667655454444 78877777766656666666665 5777777788888888888888888888888888888
Q ss_pred hhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc---hhHHHHHHHHHHHHHHHHH
Q 016350 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG---WWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 151 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---~w~~~f~~~~~~~~~~~~~ 224 (391)
.|++.+...+...+++.|..|+++||+++++.+....+|..+||.+++.+.+..+ .-...++..++..++..+.
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9998888888888999999999999999999999999999999999999987642 1244555545544444433
No 186
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.21 E-value=2.6e-10 Score=103.44 Aligned_cols=148 Identities=13% Similarity=0.066 Sum_probs=107.1
Q ss_pred HHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh-hhhHHHHHHHHHHhh
Q 016350 74 LESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-TRNLIGMLLGRFVVG 152 (391)
Q Consensus 74 ~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-~~~~~~l~~~r~l~G 152 (391)
.|.+.+.+|.+.++. ++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++... .++.+...+..++.+
T Consensus 223 ~~~~~~~~g~s~~~~--~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 300 (382)
T PRK10091 223 KPYMMFISGFSETSM--TFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICC 300 (382)
T ss_pred HHHHHHhcCCCHHHH--HHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 355656688877666 89999999999999999999999999999999988888887765543 455555666666667
Q ss_pred hccchhhHHHH-HHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHh
Q 016350 153 TGMGLGPTVAA-LYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 153 ~~~g~~~~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
++.....+... ....+..+++.++.+ ..+....+|..+||.+++.+.+..++|++.+.+.++..++.+...
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSL 372 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHH
Confidence 66554444333 334444444555544 346678899999999999998864338999988776666654443
No 187
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.20 E-value=6.6e-10 Score=103.58 Aligned_cols=175 Identities=12% Similarity=0.063 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHH--------HH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA--------FQ 122 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~--------l~ 122 (391)
.+....+..+............+|.+. +++|.+..+. ++..++..++..++.++.|+++||+++|+. +.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~--g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKEN--GLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 344445555555555555555677665 5578877666 899999999999999999999999876532 11
Q ss_pred HhhHHH--HHHHHHHHh-hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccc
Q 016350 123 LCALPM--IIGASISAT-TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (391)
Q Consensus 123 ~~~~~~--~i~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 199 (391)
.+.... ++..+.... ..+....+++-.+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.+.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~ 418 (465)
T TIGR00894 340 NGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGN 418 (465)
T ss_pred HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhhe
Confidence 111111 111111122 2334444444455555555555554455567665 589999999999999999999999998
Q ss_pred ccccc--chhHHHHHHHHHHHHHHHHHhhccc
Q 016350 200 VKEIA--GWWRICFWVSIVPAAILCLAMVFCA 229 (391)
Q Consensus 200 l~~~~--~~w~~~f~~~~~~~~~~~~~~~~~~ 229 (391)
+.+.. +.|+..|.+.++..++..+...+.+
T Consensus 419 ~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 419 ILSQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred eeCCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 87653 3388899888877777666554443
No 188
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.17 E-value=1.4e-13 Score=127.61 Aligned_cols=165 Identities=19% Similarity=0.108 Sum_probs=107.3
Q ss_pred hcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH--h--hhhH--
Q 016350 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA--T--TRNL-- 141 (391)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~--~--~~~~-- 141 (391)
.......+.+.++.+.+.. . +......+...++.+....+.||+|||++++.+..+.+++.+..+ . .++.
T Consensus 270 ~~~~~~~~~i~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS-F---LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSS 345 (451)
T ss_pred ccccccccccccccccccc-c---cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3444556778888887765 2 222233344456777777999999999999999998888877764 1 1111
Q ss_pred ---HHHHHHHHHhhhccc-hhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHH-H
Q 016350 142 ---IGMLLGRFVVGTGMG-LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSI-V 216 (391)
Q Consensus 142 ---~~l~~~r~l~G~~~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~-~ 216 (391)
...++.-.+...+.+ ...+....+..|.+|.+.|+++.++......++..+++.+...+.+..+. ...|.+.+ +
T Consensus 346 ~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~-~~~~~i~~~~ 424 (451)
T PF00083_consen 346 WWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGG-WGVFLIFAGV 424 (451)
T ss_pred ccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccchhhHHH
Confidence 111122122212222 23355567889999999999999999998888988888888877766542 33444434 4
Q ss_pred HHHHHHHHhhccccchhHHHHcCCHHH
Q 016350 217 PAAILCLAMVFCAESPHWLYKKGRTAE 243 (391)
Q Consensus 217 ~~~~~~~~~~~~~e~~~~~~~~~~~~~ 243 (391)
..+..++..+++||+ ++++.+
T Consensus 425 ~~i~~i~~~~~lpET------~g~~l~ 445 (451)
T PF00083_consen 425 CLIAIIFVYFFLPET------KGKTLE 445 (451)
T ss_pred HHHHHhheeEEEeeC------CCCCHH
Confidence 444445556889998 555544
No 189
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.16 E-value=6.2e-10 Score=115.38 Aligned_cols=143 Identities=17% Similarity=0.125 Sum_probs=118.9
Q ss_pred hHH-HhHhhhccCcc-hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHH
Q 016350 73 PLE-SISLDLGFNGN-TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFV 150 (391)
Q Consensus 73 ~~~-~i~~~~~~~~~-~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 150 (391)
.+| .+.+++|.+.. .. +++.+.+.++..++.++.|+++||+++|+++.++.++.+++.++..+..+.+.++++.++
T Consensus 254 ~~~~~~~~~~g~s~~~~~--g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (1146)
T PRK08633 254 NFPAYAKEVLGLDNTFQV--QYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFL 331 (1146)
T ss_pred hhHHHHHHHhCCCcHHHH--HHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 344 44566888766 55 899999999999999999999999999999999988888888888888898888899999
Q ss_pred hhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc-cchhHHHHHHHHHHH
Q 016350 151 VGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI-AGWWRICFWVSIVPA 218 (391)
Q Consensus 151 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-~~~w~~~f~~~~~~~ 218 (391)
.|++.+...+...+++.+..|++.||+++++.+....+|.++++.+++.+... .+ +...|++.+.+.
T Consensus 332 ~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~ 399 (1146)
T PRK08633 332 FGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLS-PAGLFYLIALVT 399 (1146)
T ss_pred HHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccC-HHHHHHHHHHHH
Confidence 99999999888899999999999999999999999999988888887766442 23 555565544443
No 190
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.14 E-value=7.3e-10 Score=99.50 Aligned_cols=121 Identities=18% Similarity=0.204 Sum_probs=96.4
Q ss_pred hhhhcccchHHHhHhhhccCcchhHHHHHHHHHH-HHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh-----
Q 016350 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT----- 138 (391)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~----- 138 (391)
..........|.+.+++|.+.++. +.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+.
T Consensus 223 ~~~~~~~~~~~~~l~~~g~~~~~~--g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~ 300 (356)
T TIGR00901 223 LGDSAATVLTTLFLLDMGFSKEEI--ALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGH 300 (356)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHH--HHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 333334456677767788877666 77776655 5678999999999999999999998888887776655443
Q ss_pred ------hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHH
Q 016350 139 ------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATC 187 (391)
Q Consensus 139 ------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 187 (391)
++.+.+..+.++.+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 301 HDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 3456777789999999999999999999999999999999999877653
No 191
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.14 E-value=8.7e-10 Score=100.10 Aligned_cols=135 Identities=18% Similarity=0.268 Sum_probs=100.8
Q ss_pred HHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh-----hhHHHHHHH
Q 016350 74 LES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT-----RNLIGMLLG 147 (391)
Q Consensus 74 ~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~-----~~~~~l~~~ 147 (391)
.|. +.+++|.++++. +++.+...++..++.++.|++.||+|+|+.+..+..+..++.++.... ++...+++.
T Consensus 229 ~~~~~~~~~g~~~~~~--g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (385)
T TIGR00710 229 APFVYIDIMGVSPSVF--GLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGP 306 (385)
T ss_pred ChHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 343 445788877666 888889999999999999999999999999988888877777666543 234455566
Q ss_pred HHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHH-HHHHHHHHhccccccccchhHHHHHH
Q 016350 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATC-LGLMGSLLIGIPVKEIAGWWRICFWV 213 (391)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~~~~~~~~l~~~~~~w~~~f~~ 213 (391)
.++.|++.+...+.......|..| ++|+++.++.+.... .|.+.++.++ .+.+..+ |...+..
T Consensus 307 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~-~~~~~~~ 370 (385)
T TIGR00710 307 MMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTA-WPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccCh-HHHHHHH
Confidence 788899999988888888888876 679999999876654 4677777665 4444333 5444443
No 192
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.13 E-value=1.7e-09 Score=98.99 Aligned_cols=156 Identities=19% Similarity=0.176 Sum_probs=118.6
Q ss_pred cchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch-----hhHHHHHhhHHHHHHHHHHHhh----hhH
Q 016350 71 NEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG-----RRRAFQLCALPMIIGASISATT----RNL 141 (391)
Q Consensus 71 ~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~l~~~~~~~~i~~~~~~~~----~~~ 141 (391)
.+..|.+.+++|+++++. ....+...+... .-++.|.++|.+- ||+.++++.++.+++.+..+.. .+.
T Consensus 10 ~~~~~~l~~~l~ls~~~~--~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQL--QRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 346788999999998877 466666666664 4788999999863 6666666777776666655543 346
Q ss_pred HHHHHHHHHhhhccchhhHHHHHHHhhcCC--ccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHH
Q 016350 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSP--PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (391)
Q Consensus 142 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~ 219 (391)
....+.-++..+|........-+++.|... ++.||...+.......+|.+++..++|.+.+..+ +|..|.+.+....
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~ 165 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG-PQGVFLISAALPL 165 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC-CeEEehHHHHHHH
Confidence 666677788889999999999999999884 3447888888889999999999999999998888 7899988776666
Q ss_pred HHHHHhhcccc
Q 016350 220 ILCLAMVFCAE 230 (391)
Q Consensus 220 ~~~~~~~~~~e 230 (391)
+..+..+++.|
T Consensus 166 l~~~~~~~~~~ 176 (433)
T PF03092_consen 166 LMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHhhh
Confidence 66555444444
No 193
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.13 E-value=3.2e-10 Score=100.61 Aligned_cols=141 Identities=15% Similarity=0.068 Sum_probs=120.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhh
Q 016350 89 AEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (391)
Q Consensus 89 ~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (391)
..|.+.+...+.-++.-.+..++.+|+|.|+.++++.++.++=.+++++++|.+.+.+.+.+.|+-.+........|+++
T Consensus 260 ~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~ 339 (412)
T PF01306_consen 260 MYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITA 339 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccchHHHHH-HHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHh-hcccc
Q 016350 169 VSPPFVRGTYGAFI-QIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM-VFCAE 230 (391)
Q Consensus 169 ~~~~~~r~~~~~~~-~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~-~~~~e 230 (391)
.+|+|..++...+. +.+..+|..+.+.++|.+.+..| .+..|++.+.+.+...+.. +.+++
T Consensus 340 ~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 340 HFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred hCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHHheeeecC
Confidence 99999888887774 68889999999999999999998 7989988777766665554 44443
No 194
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.13 E-value=6.1e-10 Score=104.48 Aligned_cols=131 Identities=16% Similarity=0.134 Sum_probs=109.6
Q ss_pred cchHHHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh----hhhHHHHH
Q 016350 71 NEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT----TRNLIGML 145 (391)
Q Consensus 71 ~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~----~~~~~~l~ 145 (391)
...+|.+.+ .+|.+..+. ++......++..++.++.|++.||+|||+++..+..+.+++..+..+ ..+++.+.
T Consensus 275 ~~~~p~~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (485)
T TIGR00711 275 FYLLPLYLQQVLGYTALQA--GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIA 352 (485)
T ss_pred HHHHHHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHH
Confidence 345665554 478877666 88888899999999999999999999999999999888888887663 23566677
Q ss_pred HHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccc
Q 016350 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (391)
Q Consensus 146 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (391)
...++.|++.+...+.......+..|+++|+++.++.+....+|..+|+.+.+.+.++
T Consensus 353 ~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 353 LPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7789999999988877777788889999999999999999999999999998877654
No 195
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.12 E-value=1.9e-09 Score=98.44 Aligned_cols=146 Identities=16% Similarity=0.137 Sum_probs=103.3
Q ss_pred HHhHhhhccCcchhHHHHHHHHHH-HHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHH---Hhh-hhHHHHHHHH-
Q 016350 75 ESISLDLGFNGNTLAEGLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---ATT-RNLIGMLLGR- 148 (391)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~~-~~~~~l~~~r- 148 (391)
+.+.+++|.+.++. +++.+... .+..++.+++|++.||+|+|+.+..+..+..+..+.. ++. ++.+.+++.-
T Consensus 234 ~~l~~~~G~~~~~~--g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~ 311 (402)
T PRK11902 234 TFLIRGAGFSAGEV--GIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIG 311 (402)
T ss_pred HHHHHhcCCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 45667788887666 78776544 4678999999999999999998887777666554433 343 3555555544
Q ss_pred ---HHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHh
Q 016350 149 ---FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 149 ---~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
+..|++.+...+....++.+.+|.+++ +..+...++|...++.++|.+.+..| |+..|.+.++.+++..+..
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHH
Confidence 345565666677777777777775544 55555566777666678999999998 9999999888777765555
Q ss_pred hc
Q 016350 226 VF 227 (391)
Q Consensus 226 ~~ 227 (391)
+.
T Consensus 387 ~~ 388 (402)
T PRK11902 387 WL 388 (402)
T ss_pred HH
Confidence 43
No 196
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.11 E-value=3.2e-09 Score=95.31 Aligned_cols=167 Identities=14% Similarity=0.024 Sum_probs=108.2
Q ss_pred HHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh---hHHHHH-hhHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR---RRAFQL-CALPMII 130 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr---r~~l~~-~~~~~~i 130 (391)
.+.+..+........+...+|.+.++.|.+.+ . +...++..+...++ .++++||..| |+.... ...+.++
T Consensus 196 ~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~--~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~ 269 (368)
T TIGR00903 196 IIGAILGFGVALFDNLAIWLEAALRPAGLEDI-A--GDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAA 269 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-H--HHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHH
Confidence 33333444444444445578888888777643 2 55555555544444 4677777654 443332 3444444
Q ss_pred HHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHH
Q 016350 131 GASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (391)
Q Consensus 131 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 210 (391)
.....+++.+....++.-.+.|++....++...++.+|.+|++.|+++.|+.+....+|...+|.+.+.+.. + -+..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~-~~~~ 346 (368)
T TIGR00903 270 FFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S-AEAY 346 (368)
T ss_pred HHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C-HHHH
Confidence 444445555544455556677777777878888999999999999999999999999999888888876663 4 5667
Q ss_pred HHHHHHHHHHHHHHhhcccc
Q 016350 211 FWVSIVPAAILCLAMVFCAE 230 (391)
Q Consensus 211 f~~~~~~~~~~~~~~~~~~e 230 (391)
|.+.+++.++..+.....++
T Consensus 347 f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 347 FTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 77766666665555444344
No 197
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.11 E-value=8.3e-10 Score=114.16 Aligned_cols=144 Identities=16% Similarity=0.054 Sum_probs=114.5
Q ss_pred chHHHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh------------
Q 016350 72 EPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT------------ 138 (391)
Q Consensus 72 ~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~------------ 138 (391)
..+|.+.+ .+|.+.... |++.+.+.++..++.++.|+++|+.++++.+..+.++.+++.+..++.
T Consensus 246 ~~~p~~~~~~~g~~~~~~--g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1140)
T PRK06814 246 SQLPLLAKETLGGDENVA--TLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLK 323 (1140)
T ss_pred HHhHHHHHHHcCCchHHH--HHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccccc
Confidence 35565554 478776666 899999999999999999999998888777666666666655544443
Q ss_pred --------hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHH
Q 016350 139 --------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRIC 210 (391)
Q Consensus 139 --------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~ 210 (391)
++.+.++++.++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++++.+.....+....
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~ 403 (1140)
T PRK06814 324 SILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWI 403 (1140)
T ss_pred chhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHH
Confidence 677778888999999999999999999999999999999999999999999999999988876433225666
Q ss_pred HHHHHHH
Q 016350 211 FWVSIVP 217 (391)
Q Consensus 211 f~~~~~~ 217 (391)
|++.++.
T Consensus 404 ~~~~~~~ 410 (1140)
T PRK06814 404 ILFIALA 410 (1140)
T ss_pred HHHHHHH
Confidence 6554443
No 198
>PRK09848 glucuronide transporter; Provisional
Probab=99.11 E-value=2e-09 Score=99.76 Aligned_cols=129 Identities=16% Similarity=0.041 Sum_probs=97.6
Q ss_pred chHHHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh--hHHHHHHHH
Q 016350 72 EPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGR 148 (391)
Q Consensus 72 ~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~l~~~r 148 (391)
...|.+.+ .+|.+.... ++......++..++.++++++.||+|+|+++..+.++..++.+...+.+ +++.+++..
T Consensus 249 ~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~ 326 (448)
T PRK09848 249 ASSLFYVRYVLNDTGLFT--VLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVAL 326 (448)
T ss_pred hhheeeEeeecCChHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHH
Confidence 34443433 355433222 3434444567788999999999999999999999998888887776643 567777778
Q ss_pred HHhhhccchhhHHHHHHHhhcCCcc-------ccchHHHHHHHHHHHHHHHHHHhcccccc
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSPPF-------VRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (391)
++.|+|.+...+...++.+|..|.+ ++|...+..+....+|..+++.+.+.+.+
T Consensus 327 ~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 327 AIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999988754 35888999999999999998888776543
No 199
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.11 E-value=4.5e-10 Score=100.60 Aligned_cols=126 Identities=26% Similarity=0.332 Sum_probs=106.0
Q ss_pred hhcccchHHHh-HhhhccC-cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh---hH
Q 016350 67 LGVVNEPLESI-SLDLGFN-GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR---NL 141 (391)
Q Consensus 67 ~~~~~~~~~~i-~~~~~~~-~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~---~~ 141 (391)
........|.+ .+++|.+ ..+. ++..+...++..++.++.|++.||+|+|+..........++.+...+.. +.
T Consensus 222 ~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
T PF07690_consen 222 FSGFSFFLPLYLQEVLGFSGPSQA--GLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSP 299 (352)
T ss_dssp HHHHHHHHHHHCCHHHHCCTHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHH
T ss_pred HHHhhcccchhhhhccCCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 33355667775 8889988 4444 7889999999999999999999999998888888777777777665543 45
Q ss_pred HHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHH
Q 016350 142 IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (391)
Q Consensus 142 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 194 (391)
...++.-++.|++.+...+....++.|.+|+++||++.++.+....+|..++|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 77777889999999999999999999999999999999999999999999887
No 200
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.10 E-value=1.6e-09 Score=88.90 Aligned_cols=169 Identities=17% Similarity=0.109 Sum_probs=116.2
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHH-H
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII-G 131 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i-~ 131 (391)
+..++..+....+....+++ ..+.+.+|+|+.+. +.+.+....-.++.+++.|.++|++|++...+.+..+..+ +
T Consensus 269 ~~iicv~yyva~fPFi~lg~--~fF~~rfGlS~~~a--~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~ 344 (459)
T KOG4686|consen 269 LVIICVLYYVAWFPFITLGP--MFFQKRFGLSAVSA--GNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLG 344 (459)
T ss_pred HHHHHHHHHHHHHHHhhhhH--HHHHHhhCCChhhc--cchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHH
Confidence 33444444444443333333 24788899998776 5666666666678899999999999999887776554443 3
Q ss_pred HHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch--hHH
Q 016350 132 ASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW--WRI 209 (391)
Q Consensus 132 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--w~~ 209 (391)
-....++ ++.-.++-.+.|+............++...|+++-|++.|..+...++|..+.|++++.+.+..|+ |--
T Consensus 345 H~~l~Ft--~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le 422 (459)
T KOG4686|consen 345 HSGLFFT--FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLE 422 (459)
T ss_pred hhhHHhh--hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHH
Confidence 3333332 333345567788888777777788889999999999999999999999999999999999987763 333
Q ss_pred HHHH-HHHHHHHHHHHhhc
Q 016350 210 CFWV-SIVPAAILCLAMVF 227 (391)
Q Consensus 210 ~f~~-~~~~~~~~~~~~~~ 227 (391)
.|++ .+..++....+.+.
T Consensus 423 ~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 423 AFFLIIGLMALTSVGILFY 441 (459)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4444 33444443333333
No 201
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.08 E-value=2.6e-10 Score=96.98 Aligned_cols=125 Identities=21% Similarity=0.217 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHH----HHHHHHHHhhhccchhhHHHHHHHhhcCCcccc
Q 016350 100 GAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI----GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVR 175 (391)
Q Consensus 100 ~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~----~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r 175 (391)
.-.-|.++.+++.||+|||+.+..+++++++..+....+.+-. .++.+|++.- +.+...+.|..|.+|.+.|
T Consensus 393 aefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~fqvaYvYtPEVyPTavR 468 (528)
T KOG0253|consen 393 AEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAFQVAYVYTPEVYPTAVR 468 (528)
T ss_pred hhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chheEEEEecCcccchhhh
Confidence 3346889999999999999999999999999999887765433 3344566554 3444556789999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccccc
Q 016350 176 GTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 176 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
+.+.|.-....-+|.++.|+++-. .+..- ..+..+.+...++..+...++|-+
T Consensus 469 atgvGtcSsmaRIggI~~p~iA~~-~e~s~--sl~i~vy~~~~ilagIavcffPiE 521 (528)
T KOG0253|consen 469 ATGVGTCSSMARIGGIFSPVIAMR-AELST--SLPIFVYGALFILAGIAVCFFPIE 521 (528)
T ss_pred hcchhhhhhHHhhhhhhhhHHHHH-hccce--eehHHHHHHHHHHHHHHheeeeec
Confidence 999999999999999999999832 22221 233334444455555555555543
No 202
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.07 E-value=1.3e-08 Score=95.75 Aligned_cols=185 Identities=20% Similarity=0.136 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i 130 (391)
+.+..+.+..+.............+.+.+..|.+.+.. +...+..+...++..+...+.||+|||+.++.+...+.+
T Consensus 295 ~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~~---~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~ 371 (513)
T KOG0254|consen 295 RLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDTF---LASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSI 371 (513)
T ss_pred HHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCchH---HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHH
Confidence 34444555555555566667778888999888875532 445555566667788889999999999999999999999
Q ss_pred HHHHHHhhhhH--------------HHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHh
Q 016350 131 GASISATTRNL--------------IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (391)
Q Consensus 131 ~~~~~~~~~~~--------------~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 196 (391)
+.++.+..... .....+-++..+..+ ..+....+.+|.+|.+.|+++.++......+...+-...
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g-~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~ 450 (513)
T KOG0254|consen 372 CLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIG-WGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFF 450 (513)
T ss_pred HHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcc-cccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHH
Confidence 99988755222 111222233333333 334555788999999999999999887777665544444
Q ss_pred ccccccccchhHHHHHHHHHHH-HHHH-HHhhccccchhHHHHcCCHHHHHH
Q 016350 197 GIPVKEIAGWWRICFWVSIVPA-AILC-LAMVFCAESPHWLYKKGRTAEAEA 246 (391)
Q Consensus 197 ~~~l~~~~~~w~~~f~~~~~~~-~~~~-~~~~~~~e~~~~~~~~~~~~~~~~ 246 (391)
...+....+ +...|...+..+ +... ...+++||+ +++..|..+
T Consensus 451 ~~~~~~~~~-~~~~f~~f~~~~~~~~~~fv~~~~pET------kg~sleei~ 495 (513)
T KOG0254|consen 451 FPFITEALG-IGGTFGYFGGICLLSLIIFVFFFVPET------KGLTLEEIN 495 (513)
T ss_pred HHHHHHhcc-ccchHHHHHHHHHHHHHHHheEEcccC------CCCcHHHHH
Confidence 333333322 234444433333 3334 456779998 666555433
No 203
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.07 E-value=4.2e-09 Score=92.34 Aligned_cols=158 Identities=28% Similarity=0.406 Sum_probs=125.5
Q ss_pred HHHhhhhhhcccchHHHhHhhhccCcc--hhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh
Q 016350 60 SFLFGYHLGVVNEPLESISLDLGFNGN--TLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (391)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 137 (391)
.+....+.....+..+.+..+++.+.. .. ++..+.+.++..++.++.|.++||+|||+.+..+.....++.+.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~ 88 (338)
T COG0477 11 ALLLGLDLGLLSPALPLLLSTLSLSSGRLLY--GLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLAL 88 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHHcCCCchhHHH--HHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHh
Confidence 333345666666778888888776542 33 79999999999999999999999999999888888776666777777
Q ss_pred hhh--HHHHHHHHHHhhhccchhhHHHHHHHhhcCCc-cccchHHHHHHH-HHHHHHHHHHHhccccccc--cchhHHHH
Q 016350 138 TRN--LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-FVRGTYGAFIQI-ATCLGLMGSLLIGIPVKEI--AGWWRICF 211 (391)
Q Consensus 138 ~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~~~~~~~~l~~~--~~~w~~~f 211 (391)
..+ .+.+++.|+++|++.+...+....++.|++|+ ++|+...+.... ...+|..+++.+++.+... .+ ||..|
T Consensus 89 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 167 (338)
T COG0477 89 APNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWG-WRAAF 167 (338)
T ss_pred CccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHH
Confidence 776 89999999999999999999999999999987 678998888888 5778888888777766544 34 89876
Q ss_pred HHHHHHHHH
Q 016350 212 WVSIVPAAI 220 (391)
Q Consensus 212 ~~~~~~~~~ 220 (391)
.........
T Consensus 168 ~~~~~~~~~ 176 (338)
T COG0477 168 LLAALLGLL 176 (338)
T ss_pred HHHHHHHHH
Confidence 665554433
No 204
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.06 E-value=5.7e-09 Score=94.52 Aligned_cols=121 Identities=11% Similarity=0.099 Sum_probs=85.9
Q ss_pred HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH---h-hhhHHHHHHHHHHh
Q 016350 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA---T-TRNLIGMLLGRFVV 151 (391)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~---~-~~~~~~l~~~r~l~ 151 (391)
.+.+++|.++++. ++..+...++..++.++.|++.||+|||+.+..+..+..+..+... . ..+++...++-.+.
T Consensus 220 ~~~~~~g~s~~~~--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (377)
T PRK11102 220 VYIELNGVSPQNF--GYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAF 297 (377)
T ss_pred HHHHHhCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3456678877666 8999999999999999999999999999999888776544433322 2 22444444455455
Q ss_pred hhccchhhHHHHHHHhhcCCccccchHHHHHHHH-HHHHHHHHHHhccc
Q 016350 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIA-TCLGLMGSLLIGIP 199 (391)
Q Consensus 152 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~ 199 (391)
+.+.+........++.|..| ++++++.++.+.. ..+|..+++++++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 298 VGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 55555555566667778766 7899999987643 56778888877654
No 205
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.06 E-value=1.8e-09 Score=101.20 Aligned_cols=129 Identities=12% Similarity=0.014 Sum_probs=108.1
Q ss_pred chHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh---hhHHHHHHH
Q 016350 72 EPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT---RNLIGMLLG 147 (391)
Q Consensus 72 ~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~---~~~~~l~~~ 147 (391)
...|. +++.+|.++.+. |+....+.++..++.++.|++.||+|+|+++..+.++.+++.++.... ++.+...+.
T Consensus 280 ~~~~~~lq~v~g~s~~~a--g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 357 (495)
T PRK14995 280 LLMAQELQFVHGLSPLEA--GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGL 357 (495)
T ss_pred HHHHHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 34554 445578877766 898999999999999999999999999999998988888777655432 455666778
Q ss_pred HHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc
Q 016350 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (391)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (391)
.++.|+|.|...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 358 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 358 MALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999988888888999999999999999999999999999999887654
No 206
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.05 E-value=2.8e-09 Score=98.16 Aligned_cols=148 Identities=15% Similarity=0.088 Sum_probs=117.5
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+..+....++............+.+.++.--+++.. +.+..+..++..++.+++++++||+|+|+++..+..+.+++.
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~--~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~ 304 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLI--SIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGF 304 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhh--HHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHH
Confidence 334444555555666666666666666532222333 788888999999999999999999999999999999999999
Q ss_pred HHHHhhh--hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCc-------cccchHHHHHHHHHHHHHHHHHHhcccccc
Q 016350 133 SISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-------FVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (391)
Q Consensus 133 ~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (391)
++..+.+ |.+.+++.-++.|++.+...+...++++|..+. ++.|...+..+...-+|..+++.+.+.+.+
T Consensus 305 ~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 305 LLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred HHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 9988886 999999999999999999999999999998873 335778888888888888888877766544
No 207
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.05 E-value=6.8e-09 Score=94.41 Aligned_cols=133 Identities=13% Similarity=0.028 Sum_probs=104.8
Q ss_pred HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhcc
Q 016350 76 SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGM 155 (391)
Q Consensus 76 ~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~ 155 (391)
.+.+.+|.++.+. |++.+.+.++..++++..+++.||.++|+++..+. +.++...+.++.++++..++.-++.|++.
T Consensus 231 ~~~~~lg~s~~~~--G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 231 WAPVALGITLNQP--AYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHcCCChhHH--HHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence 3455678877766 99999999999999999999999999998888775 44455555566777777778888999999
Q ss_pred chhhHHHHHHHhhcCCccc-cchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH
Q 016350 156 GLGPTVAALYVTEVSPPFV-RGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWV 213 (391)
Q Consensus 156 g~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~ 213 (391)
+...+...+.+.|..|++. +|++.++.+....+|..++..+.+.+. ..+ =+..+.+
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~ 364 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV-KLG-VPVVAVI 364 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH-HcC-CCHHHHH
Confidence 9888878888888766654 799999999999999999998888654 333 3444444
No 208
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.04 E-value=2.1e-09 Score=97.93 Aligned_cols=132 Identities=12% Similarity=0.123 Sum_probs=87.1
Q ss_pred hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccc
Q 016350 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (391)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g 156 (391)
+.+++|.+.++. +.+.+...++..++.++.+++.||+|||+++..+..+..++.+...+.++....+..-.+.+.|.+
T Consensus 230 ~~~~~g~~~~~~--~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 230 LMEQMGFSRGEY--AIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFS 307 (392)
T ss_pred HHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446778876665 788888899999999999999999999999999999888888888777665544444445444444
Q ss_pred hhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHH
Q 016350 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIV 216 (391)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~ 216 (391)
...+.. ...+..|.++|+ +.......++..+++.+++.+.+..+ +.....+.+.
T Consensus 308 ~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g-~~~~~~~~~~ 361 (392)
T PRK10473 308 VGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLG-ISAWNMLIGI 361 (392)
T ss_pred HHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHH
Confidence 443332 334445544443 33334445566666666666665555 4443433333
No 209
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.03 E-value=9.7e-08 Score=91.07 Aligned_cols=151 Identities=15% Similarity=0.169 Sum_probs=116.9
Q ss_pred hHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHhhHHHHHHHHHHHhhhh--------HHH
Q 016350 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRN--------LIG 143 (391)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~--------~~~ 143 (391)
+...+.+.+|.+.+.. ..+...+....-+.++++|+++|+ +||++.++++.++..+|.++.+++.. ...
T Consensus 10 LvlYl~~~lg~~~~~A--~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~ 87 (654)
T TIGR00926 10 LVLYFLNFLGFSESTS--TVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLL 87 (654)
T ss_pred HHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHH
Confidence 3445566678876665 566777776777889999999996 99999999999999999888876421 233
Q ss_pred HHHHHHHhhhccchhhHHHHHHHhhcCCccc---cchHHHHHHHHHHHHHHHHHHhccccccc-------cchhHHHHHH
Q 016350 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFV---RGTYGAFIQIATCLGLMGSLLIGIPVKEI-------AGWWRICFWV 213 (391)
Q Consensus 144 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-------~~~w~~~f~~ 213 (391)
.+++-.+..+|.|+.-+...+...|.+++++ |-....++..+.++|+++++.+.+++.+. .+ |...|.+
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~-~~~aF~i 166 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDC-YPLAFGV 166 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcc-hHHHHHH
Confidence 5677788889999999999999999997643 56678888899999999999888877633 24 8889988
Q ss_pred HHHHHHHHHHHhh
Q 016350 214 SIVPAAILCLAMV 226 (391)
Q Consensus 214 ~~~~~~~~~~~~~ 226 (391)
.++..++.++...
T Consensus 167 ~~i~m~ia~lvf~ 179 (654)
T TIGR00926 167 PAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 7777776655543
No 210
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.03 E-value=7.5e-09 Score=96.49 Aligned_cols=136 Identities=8% Similarity=-0.025 Sum_probs=97.0
Q ss_pred hhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh-----hh
Q 016350 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-----TR 139 (391)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-----~~ 139 (391)
..........+.+.+...-+.+. .+++.+...++..++.+++++++||+|+|+.+..+..+..++.+...+ .+
T Consensus 245 ~~~~~~~~~~~y~~~y~~~~~~~--~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (473)
T PRK10429 245 IASNIINGFAIYYFTYVIGDADL--FPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPH 322 (473)
T ss_pred HHHHHHhhheeeEEEEECCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCch
Confidence 33333333444444443222222 266777777888899999999999999999999888877766655432 34
Q ss_pred hHHHHHHHHHHhhhccchhhHHHHHHHhhcCC-------ccccchHHHHHHHHHHHHHHHHHHhcccccc
Q 016350 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP-------PFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (391)
Q Consensus 140 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (391)
+.+.+++.-++.|++.+...+...++++|..+ .+..|...+......-+|..+++.+.+.+.+
T Consensus 323 ~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 323 NALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777888999999999999999999865 2334557888888888888888877776654
No 211
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.01 E-value=1.3e-09 Score=94.84 Aligned_cols=150 Identities=17% Similarity=0.151 Sum_probs=117.8
Q ss_pred ccchHH-HhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh-------hH
Q 016350 70 VNEPLE-SISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR-------NL 141 (391)
Q Consensus 70 ~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~-------~~ 141 (391)
++..+| .+.++|+.+..+. |.....+.+...+..+.+|+++||+|.+|++......++++..+.++.+ +.
T Consensus 237 fs~~l~~~~~~~fg~~~~~A--g~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~ 314 (417)
T COG2223 237 FSAYLPMYLVTQFGLSPVTA--GLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSF 314 (417)
T ss_pred HHHHHHHHHHHhcCCChhhH--HHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcch
Confidence 344555 4666789887776 7889999999999999999999999999999999999999988877663 23
Q ss_pred ----HHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHH
Q 016350 142 ----IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (391)
Q Consensus 142 ----~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~ 217 (391)
..++...+..|+|.|..+ .++..++| ++-|.+.|+.+...++|...-|..-+...+..|.+...|++....
T Consensus 315 ~~~~~~~l~l~~~~G~GnGsvf----k~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~ 389 (417)
T COG2223 315 VVFVAVFLALFVFAGLGNGSVF----KMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAF 389 (417)
T ss_pred HHHHHHHHHHHHHhccCcchhe----eechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHH
Confidence 334556677777777665 56666665 468999999999999998888888777777766689999887777
Q ss_pred HHHHHHHhh
Q 016350 218 AAILCLAMV 226 (391)
Q Consensus 218 ~~~~~~~~~ 226 (391)
.+++.+..+
T Consensus 390 ~~~a~v~~~ 398 (417)
T COG2223 390 YLVALVLTW 398 (417)
T ss_pred HHHHHHHHH
Confidence 777666543
No 212
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.00 E-value=3.7e-07 Score=83.32 Aligned_cols=286 Identities=8% Similarity=-0.015 Sum_probs=159.4
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcc---hhHHHHHHHHHHHHHHHH-HHHHHHhhhcchhhHHHHHhhH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGN---TLAEGLVVSMCLGGAFIG-STLSGWIADGVGRRRAFQLCAL 126 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~s~~~~~~~i~-~~~~g~l~dr~Grr~~l~~~~~ 126 (391)
+.++...+..|+..++.+ .+-++.+++.++.. .-.+.++-+...+..++. .++.+++++|++|++++-....
T Consensus 7 ~k~~~~~l~fF~il~~Y~----iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYT----ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 344444444444444443 44556677666321 112378888777776666 8999999999999999888777
Q ss_pred HHHHHHHHHHhh----h---------------------------hHHHHHHHHHHhhhccchhhH-HHHHHHhhcCCccc
Q 016350 127 PMIIGASISATT----R---------------------------NLIGMLLGRFVVGTGMGLGPT-VAALYVTEVSPPFV 174 (391)
Q Consensus 127 ~~~i~~~~~~~~----~---------------------------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~ 174 (391)
.+.....+.++. + +.|...+.-+...+-...... ....+.+|.++.++
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~q 162 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDE 162 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 776666665544 1 122233333444444444444 67889999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHhcccccc-------ccchhH----HHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHH
Q 016350 175 RGTYGAFIQIATCLGLMGSLLIGIPVKE-------IAGWWR----ICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAE 243 (391)
Q Consensus 175 r~~~~~~~~~~~~~g~~~~~~~~~~l~~-------~~~~w~----~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 243 (391)
-.|..++.+.+.++|.++++.+..++.+ ..+.|. ..+.+.++.+++...+..++.+.. ..+++..+
T Consensus 163 akRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~---~~~~~~~~ 239 (472)
T TIGR00769 163 AKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV---LTDPRSYN 239 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCccccc
Confidence 9999999999999999999988777652 122242 233333333333333333321110 00000000
Q ss_pred HHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCC-
Q 016350 244 AEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLS- 322 (391)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 322 (391)
.+ +..+.++.+.....+.+.++++|....+.+...++.......... +-.......+..
T Consensus 240 ~~-----------------~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~---~k~~v~~~~p~~~ 299 (472)
T TIGR00769 240 PA-----------------LKEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVT---WKSKLKAQYPSPN 299 (472)
T ss_pred hh-----------------hccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHCCCHH
Confidence 00 000111122223456677788887776655555544332222211 112222222211
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 016350 323 -----SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAV 363 (391)
Q Consensus 323 -----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (391)
.|......++..++..++.+++.+|+|-+....+.-+++.+
T Consensus 300 ~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 300 EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 22345555666666777779999999988766654444433
No 213
>PRK10133 L-fucose transporter; Provisional
Probab=98.99 E-value=7.6e-09 Score=95.30 Aligned_cols=135 Identities=14% Similarity=0.019 Sum_probs=104.4
Q ss_pred HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccch
Q 016350 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGL 157 (391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~ 157 (391)
++.+|.++.+. ++....+.++..++.++.|++.||+|+|+++..+.++..++.++..+.++.. .+..-++.|++.+.
T Consensus 287 ~~~~g~s~~~a--g~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFA--ANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHH
Confidence 35678887776 8999999999999999999999999999999998888777766666655542 34566789999999
Q ss_pred hhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHH
Q 016350 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVP 217 (391)
Q Consensus 158 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~ 217 (391)
.+|...+...|..++ +.+.+.++... ..+|..++|.+.+.+.+..|.-|..|++..+.
T Consensus 364 i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~ 421 (438)
T PRK10133 364 QYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALC 421 (438)
T ss_pred HHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 999999999998765 46777777764 44677777777778777654236676654443
No 214
>PRK09669 putative symporter YagG; Provisional
Probab=98.99 E-value=1.3e-08 Score=94.15 Aligned_cols=114 Identities=15% Similarity=0.054 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh--hhhHHHHHHHHHHhhhccchhhHHHHHHHhh
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (391)
+.+.....++..++.+++++++||+|+|+.+..+.++.++..+...+ .++.+.+++..++.|++.+...+...++++|
T Consensus 267 ~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad 346 (444)
T PRK09669 267 TLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSD 346 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45566667778889999999999999999999887766654443322 3567777888899999999999999999999
Q ss_pred cCCc-------cccchHHHHHHHHHHHHHHHHHHhcccccccc
Q 016350 169 VSPP-------FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (391)
Q Consensus 169 ~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (391)
..+. +..|...+.......+|..+|+.+++.+.+..
T Consensus 347 ~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 347 VVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred hhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8862 23455678888888888888888877765543
No 215
>PRK11043 putative transporter; Provisional
Probab=98.97 E-value=1.3e-08 Score=92.91 Aligned_cols=129 Identities=11% Similarity=0.025 Sum_probs=97.7
Q ss_pred hHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHH---Hh--hhhHHHHHHH
Q 016350 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASIS---AT--TRNLIGMLLG 147 (391)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~---~~--~~~~~~l~~~ 147 (391)
..|.+.+++|.+.++. |+....+.++..++.+..+++.||+|+|+.+.......+++.+.. .. .++...+++.
T Consensus 225 ~~p~~~~~~g~s~~~~--g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 225 GSPFILEQMGYSPADI--GLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HhHHHHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 4577777888877666 777777888889999999999999999997766655554444332 22 3455556666
Q ss_pred HHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc
Q 016350 148 RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA 204 (391)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 204 (391)
..+.|++.+..++.......|..| ++|+++.++.+.....+...++.+.+.+.+..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTP 358 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 778888888888888887777775 57999999999887878788888877777644
No 216
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.97 E-value=9.4e-09 Score=93.50 Aligned_cols=134 Identities=14% Similarity=-0.024 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh-h-----hhHHHHHHHHHHhhhccchhhHHHHHHHh
Q 016350 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-T-----RNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (391)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 167 (391)
..+..+...+..+++|+++||+|+|+++..+.+...++...... . .+++.+.+.-+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 33445677888999999999999999999998877777643221 1 24555555444444444444445556666
Q ss_pred hcCCc---------------------cccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhh
Q 016350 168 EVSPP---------------------FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMV 226 (391)
Q Consensus 168 ~~~~~---------------------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~ 226 (391)
+.+|+ ++-|.+.|+.+....+|..+.|.+-+...+..|.+...|+...+..++++++.+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 66663 146678888888889988888866666666555588888887777777666554
Q ss_pred c
Q 016350 227 F 227 (391)
Q Consensus 227 ~ 227 (391)
+
T Consensus 452 ~ 452 (462)
T PRK15034 452 L 452 (462)
T ss_pred H
Confidence 3
No 217
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.95 E-value=7.9e-09 Score=90.73 Aligned_cols=147 Identities=12% Similarity=0.113 Sum_probs=103.2
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc----chhhHHHHHh-hHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAFQLC-ALP 127 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~-~~~ 127 (391)
++.+....+-..+.+..-....|++.+++|+..... +.+--..-+...+.+|+.|..+|| |||||.++.. .+.
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~--S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~ 111 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWS--SIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLL 111 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccc--cccccccccccceecccccccccccccccccccchHHHhhHH
Confidence 334444444444555555567788888899876554 444444455567889999999995 9998877664 555
Q ss_pred HHHHHHHHHhhhhHH-----------------HHHHHHHHhhhccchhhHHHHHHHhhcCCccccch-HHHHHHHHHHHH
Q 016350 128 MIIGASISATTRNLI-----------------GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGT-YGAFIQIATCLG 189 (391)
Q Consensus 128 ~~i~~~~~~~~~~~~-----------------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g 189 (391)
.+++.++..++.++. .++++--+.=++.-.....+-++++|...++++.+ +.+.+....++|
T Consensus 112 i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avG 191 (498)
T KOG0637|consen 112 IAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVG 191 (498)
T ss_pred HHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhc
Confidence 666666777765543 33334444445566777888899999998777777 999999999999
Q ss_pred HHHHHHhccccc
Q 016350 190 LMGSLLIGIPVK 201 (391)
Q Consensus 190 ~~~~~~~~~~l~ 201 (391)
..+|...++++.
T Consensus 192 nvLGY~~g~y~~ 203 (498)
T KOG0637|consen 192 NVLGYALGSYLG 203 (498)
T ss_pred ceeeeecccccC
Confidence 999999988544
No 218
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.3e-07 Score=80.97 Aligned_cols=157 Identities=15% Similarity=0.115 Sum_probs=125.6
Q ss_pred hcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHhhHHHHHHHHHHHhhhhHHHHHH
Q 016350 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRNLIGMLL 146 (391)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~ 146 (391)
+.....+|.+..|-|+|..+. |++.+...+.....++....+.+| -.+|+..+....++.++.+.+.+.+.-..+.-
T Consensus 225 Y~~~~WLP~ili~~G~sa~~a--G~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw 302 (395)
T COG2807 225 YIVIGWLPAILIDRGLSAAEA--GSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW 302 (395)
T ss_pred HHHHHHHHHHHHHcCCCHHHh--hhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 334557899999999998888 999999999999999999999995 56788888888888888888877765433333
Q ss_pred HHHHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHh
Q 016350 147 GRFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
-++.|+|.|..++.....+.+..+ +++-++..++.+....+=..+||.+.|++-|..|+|+......+...+...+.-
T Consensus 303 -~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 303 -ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred -HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 499999999999999999998876 455566666666666666788999999999988889999888777766665554
Q ss_pred hc
Q 016350 226 VF 227 (391)
Q Consensus 226 ~~ 227 (391)
+.
T Consensus 382 l~ 383 (395)
T COG2807 382 LR 383 (395)
T ss_pred hh
Confidence 43
No 219
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.88 E-value=7.6e-08 Score=89.60 Aligned_cols=134 Identities=13% Similarity=-0.016 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH----hhhc-chhhHHH--HHhhHHHHHHHHHHHh---------hhhHHHHHHHHHHhhhc
Q 016350 91 GLVVSMCLGGAFIGSTLSGW----IADG-VGRRRAF--QLCALPMIIGASISAT---------TRNLIGMLLGRFVVGTG 154 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~----l~dr-~Grr~~l--~~~~~~~~i~~~~~~~---------~~~~~~l~~~r~l~G~~ 154 (391)
+++.++..+...+.+++..+ +.|| .+.+... .+|.++.+++.+..++ ..|++++++..++.|+|
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~g 394 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLG 394 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 67888887777788777554 4443 2333333 7788888888777764 46899999999999999
Q ss_pred cchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHh
Q 016350 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 155 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
.....|...+++.+..|++.||+++|++.....+|..+++.+........+ |...|...++..++..+..
T Consensus 395 e~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 395 ELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988887666556 7777777666555554444
No 220
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.88 E-value=3.9e-08 Score=89.82 Aligned_cols=154 Identities=8% Similarity=-0.086 Sum_probs=107.1
Q ss_pred HHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH
Q 016350 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (391)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 136 (391)
.++.++...........++.+.++.+.+.++...+...+.+..+..+|.++++++.||+++|+++.++..+..+..++..
T Consensus 238 ~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~ 317 (410)
T TIGR00885 238 VIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSI 317 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 33334333333333455666666543332222214456666678899999999999999999999999999888888888
Q ss_pred hhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccccc-----chhHHHH
Q 016350 137 TTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIA-----GWWRICF 211 (391)
Q Consensus 137 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-----~~w~~~f 211 (391)
+.++... ...-++.|++.+..+|...+...+..+++.+....++... .+|..+.|.+.|.+.|.. ++.+..|
T Consensus 318 ~~~~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~ 394 (410)
T TIGR00885 318 FAGGHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSF 394 (410)
T ss_pred HcCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHH
Confidence 8777544 5667788888999999999999999876654333333333 389999999999999853 2256666
Q ss_pred HH
Q 016350 212 WV 213 (391)
Q Consensus 212 ~~ 213 (391)
++
T Consensus 395 ~~ 396 (410)
T TIGR00885 395 IL 396 (410)
T ss_pred HH
Confidence 65
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.85 E-value=6e-08 Score=88.82 Aligned_cols=171 Identities=15% Similarity=0.078 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHHHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh---------hHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR---------RRA 120 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr---------r~~ 120 (391)
..++.++++.+........+...+|.+.+ -+|.+..+. |++.++..+...+..+++|.++||.-+ |..
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~--G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkif 335 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRET--GFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIF 335 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHH
Confidence 45677888888888888888888886666 478887777 999999999999999999999998744 333
Q ss_pred HHHhhHHHHHHHHHHHhhhh--H-H---HHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHH
Q 016350 121 FQLCALPMIIGASISATTRN--L-I---GMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSL 194 (391)
Q Consensus 121 l~~~~~~~~i~~~~~~~~~~--~-~---~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 194 (391)
-.++....+++.+..++.++ . . .+.++-.+.|+..++.+ .-..|. .|++-+..+|+.+....+..+++|
T Consensus 336 n~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~----~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P 410 (466)
T KOG2532|consen 336 NTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFY----KNHQDI-APQHAGFVMGIINFVGALAGFIAP 410 (466)
T ss_pred HhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhH----hhhhhc-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 44455556666666666552 1 1 12222233333333332 222333 457789999999999999999999
Q ss_pred Hhcccccccc--chhHHHHHHHHHHHHHHHHHhhcc
Q 016350 195 LIGIPVKEIA--GWWRICFWVSIVPAAILCLAMVFC 228 (391)
Q Consensus 195 ~~~~~l~~~~--~~w~~~f~~~~~~~~~~~~~~~~~ 228 (391)
.+.+.+.+.. ..||++|++.+++.++..+.+.++
T Consensus 411 ~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 411 LLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 9999988522 239999999888888776655444
No 222
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.85 E-value=3.6e-09 Score=92.87 Aligned_cols=177 Identities=16% Similarity=0.052 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHH------HHHHHHHH-HHHHHHHHHHHHhhhcchhhHHHHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAE------GLVVSMCL-GGAFIGSTLSGWIADGVGRRRAFQL 123 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~ 123 (391)
+.++..+...|+........+.....+.+..++.+++... +-...+.. .++.-|..+...++|+.|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4556666777777777777788888899988876554321 11122222 2223366667789999999999999
Q ss_pred hhHHHHHHHHHHHhhhh--------HHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHH
Q 016350 124 CALPMIIGASISATTRN--------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLL 195 (391)
Q Consensus 124 ~~~~~~i~~~~~~~~~~--------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 195 (391)
+.+++++..+..+...| .....+..++.-+|-+. +...+-+|.+|.+.|+.+-|+..+..-.|++++..
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~---ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~ 460 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNA---TTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAF 460 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCc---eeEEeehhhchHHHhhhhhhHHHHhccchHHHHHH
Confidence 99999999999988877 12223334444443222 33456799999999999999999999999999999
Q ss_pred hcccccc-----ccchhHHHHHHHHHHHHHHHHHhhccccc
Q 016350 196 IGIPVKE-----IAGWWRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 196 ~~~~l~~-----~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
.-..+.+ ..+ -|+.|++.+...++..+..+++||+
T Consensus 461 ~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~~T~l~pEt 500 (538)
T KOG0252|consen 461 GFLYLTDHNYPPNIG-VRNVFIILAGCMLLGILFTLLIPET 500 (538)
T ss_pred HhhHhhhccCCcccc-chHHHHHHHHHHHHhHheeEEeecc
Confidence 9888887 556 7999999999999999999999998
No 223
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.84 E-value=1.5e-07 Score=88.11 Aligned_cols=133 Identities=9% Similarity=-0.001 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHHHHHHH----HHhhhcchhhHHHHHhhHHHHHHHHHHHhhhh---------HHHHHHHHHHhhhccch
Q 016350 91 GLVVSMCLGGAFIGSTLS----GWIADGVGRRRAFQLCALPMIIGASISATTRN---------LIGMLLGRFVVGTGMGL 157 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~----g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~---------~~~l~~~r~l~G~~~g~ 157 (391)
++..++..+...+..++. +++.||++.++.+.+|.++.+++.+..+++.+ .++++...++.|+|.+.
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 466666665555555555 77777777778899999999999988877765 45788899999999999
Q ss_pred hhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc-----c-----ccchhHHHHHHHHHHHHHHHHH
Q 016350 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-----E-----IAGWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 158 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-----~-----~~~~w~~~f~~~~~~~~~~~~~ 224 (391)
..|....++.+..|++.||+++|.+..+..+|..++..+..... . ..+ .++.|...++.+++..++
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~a~~ 474 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEV-YGRVFLQIGIATAVIAVL 474 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhh-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888777766653211 1 112 467777666655544333
No 224
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.79 E-value=2e-08 Score=86.65 Aligned_cols=170 Identities=16% Similarity=0.105 Sum_probs=127.9
Q ss_pred HHHHHHHHHHhhhhhhcccchHHH-hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch--hhHHHHHhhHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLES-ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPMI 129 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~ 129 (391)
+.+........+......-|.++. +.|.+..+.-+. |+..--..+.++++..+.|.++||++ |-.....+++..+
T Consensus 272 I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~--G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G 349 (464)
T KOG3764|consen 272 ILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEV--GLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVG 349 (464)
T ss_pred HhhhhcchhhccchHHHhCcccHHHHHHhccCCCcce--eeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHH
Confidence 344444445556666677788776 555565332244 55555567888999999999999999 5455555677777
Q ss_pred HHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCcc------ccchHHHHHHHHHHHHHHHHHHhccccccc
Q 016350 130 IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF------VRGTYGAFIQIATCLGLMGSLLIGIPVKEI 203 (391)
Q Consensus 130 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 203 (391)
+.+....+++++.++.+-++..|++.+...........+..+.+ ..|...++...++.+|..+||.+++.+.+.
T Consensus 350 ~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~ 429 (464)
T KOG3764|consen 350 VSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA 429 (464)
T ss_pred HHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheee
Confidence 77777889999999999999999988888776666666666543 346788999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHHh
Q 016350 204 AGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 204 ~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
.| ++|.-.+.++..++...++
T Consensus 430 iG-F~wl~~iig~~n~iyapvl 450 (464)
T KOG3764|consen 430 IG-FEWLMTIIGILNLIYAPVL 450 (464)
T ss_pred hh-HHHHHHHHHHHHHHHHHHH
Confidence 99 8998888777777654444
No 225
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.78 E-value=4.4e-08 Score=90.91 Aligned_cols=125 Identities=14% Similarity=0.046 Sum_probs=106.7
Q ss_pred hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhh----------hhHHHHHHHH
Q 016350 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATT----------RNLIGMLLGR 148 (391)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~----------~~~~~l~~~r 148 (391)
+.+|.++++. |++.....++..++....+++.+|++.|+++..+.++.+++.+..... ++.+..+..-
T Consensus 281 ~~lG~s~~~~--G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPGGPSFS--GMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCCCcchh--hhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 4678887777 899999999999999999999999999999999999998887654311 3333455567
Q ss_pred HHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
++.+++.+........++.+..|++++|+..++.....++|..+++.+++.+.+..|
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888999999988889999999999999999999999999999999999988876554
No 226
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.77 E-value=2.4e-07 Score=83.49 Aligned_cols=142 Identities=15% Similarity=0.154 Sum_probs=101.0
Q ss_pred HHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH
Q 016350 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (391)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 136 (391)
++..++........+.....+ -++.++.++....+.......+..++.+++.++.+|+|+|+++..+.++..++.++.-
T Consensus 242 l~~~l~~~~~~~i~~s~~~yy-~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~ 320 (467)
T COG2211 242 LLMNLLLFIAFNIRGSIMVYY-VTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLY 320 (467)
T ss_pred HHHHHHHHHHHHHHhhhhhee-EEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 334444444444333343333 3345666666556777777778888899999999999999999999999999999988
Q ss_pred hhh--hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCc-------cccchHHHHHHHHHHHHHHHHHHhccc
Q 016350 137 TTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP-------FVRGTYGAFIQIATCLGLMGSLLIGIP 199 (391)
Q Consensus 137 ~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~~~~~~~~ 199 (391)
+.+ +....++..++.++|.+...+...++++|..+- +.-|...+......=+|..++..+.++
T Consensus 321 f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~ 392 (467)
T COG2211 321 FTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGW 392 (467)
T ss_pred hhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 876 788888899999999999999999999887652 223445555555555555555544443
No 227
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.75 E-value=5.4e-08 Score=65.36 Aligned_cols=80 Identities=18% Similarity=0.164 Sum_probs=73.9
Q ss_pred hhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHH
Q 016350 63 FGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLI 142 (391)
Q Consensus 63 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~ 142 (391)
.+..+..+.|.+|.+++|.++|.++. |++.+...+||.+|.+...++.++..+++.+..+++...+..+.+++.++++
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~a--g~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQA--GWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 46678888999999999999998888 9999999999999999999999998999999999999999999999998876
Q ss_pred HH
Q 016350 143 GM 144 (391)
Q Consensus 143 ~l 144 (391)
..
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 54
No 228
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.74 E-value=4.7e-06 Score=75.30 Aligned_cols=106 Identities=13% Similarity=-0.071 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCcc
Q 016350 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (391)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 173 (391)
.++....+.+++++.+.+.|+.|+|..++++..+.....+..-+ +|-+-++++-.+.|+|.+..+...-.+++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 66667778899999999999999999999999988887766544 45667888999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhcccc
Q 016350 174 VRGTYGAFIQIATCLGLMGSLLIGIPV 200 (391)
Q Consensus 174 ~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (391)
.+.+..++.......+.++|..+...+
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 999999998888888888886665443
No 229
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.74 E-value=2.7e-08 Score=89.18 Aligned_cols=164 Identities=22% Similarity=0.161 Sum_probs=134.8
Q ss_pred HHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh
Q 016350 60 SFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR 139 (391)
Q Consensus 60 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~ 139 (391)
..+.+.....+...+---.||.+..+.-. |........+-.+.-++.+++.+++|+-+++..++.+..+=.+..+..+
T Consensus 380 av~mG~g~~lv~tFLfWHled~~~~~~Lf--Gv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~ 457 (618)
T KOG3762|consen 380 AVVMGAGVGLVFTFLFWHLEDLGGIKTLF--GVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ 457 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcceee--eehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc
Confidence 33344444444444444556666443333 7667777778888999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHH-HHHHHHHHHHHHhccccccccchhHHHHHHHHHHH
Q 016350 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQ-IATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (391)
Q Consensus 140 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~ 218 (391)
|.|+.+...+++|+..+..+.+..+|+++..||+.|..+.++.+ ...++|--+|.++||.+....+ =|..|.+.++.+
T Consensus 458 n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-~~ttf~~~giAc 536 (618)
T KOG3762|consen 458 NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-ARTTFRIFGIAC 536 (618)
T ss_pred CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-hHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985 6778899999999999999988 588888887777
Q ss_pred HHHHHHhh
Q 016350 219 AILCLAMV 226 (391)
Q Consensus 219 ~~~~~~~~ 226 (391)
++..+...
T Consensus 537 l~~l~~~~ 544 (618)
T KOG3762|consen 537 LVTLALFI 544 (618)
T ss_pred HHHHHHHH
Confidence 77655543
No 230
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.73 E-value=8.3e-07 Score=80.94 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=92.6
Q ss_pred hHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHH-HHHHHHHh--hhhHHHHHHHHHHhhh
Q 016350 77 ISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI-IGASISAT--TRNLIGMLLGRFVVGT 153 (391)
Q Consensus 77 i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~-i~~~~~~~--~~~~~~l~~~r~l~G~ 153 (391)
+.+.+|.+..+. +++.....++..++.++.+++.||+|++........... +....... ..+.+.+++..++.|+
T Consensus 234 ~~~~~g~~~~~~--~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (394)
T PRK11652 234 MGAVLGLSSMTV--SILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFF 311 (394)
T ss_pred HHHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 334478776655 888888888889999999999999984443322222222 22222222 2355667778899999
Q ss_pred ccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 154 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
+.+...+....+..|.+| ++++++.++.+....+|..+++.+++.+.....
T Consensus 312 g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~ 362 (394)
T PRK11652 312 GAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQ 362 (394)
T ss_pred HHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCch
Confidence 999999999999999886 578999999999999999999999888766543
No 231
>PRK11462 putative transporter; Provisional
Probab=98.69 E-value=1e-06 Score=81.79 Aligned_cols=111 Identities=17% Similarity=0.011 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhh--hHHHHHHHHHHhhhccchhhHHHHHHHhh
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTR--NLIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (391)
+.+.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-++.|++.+...+...++++|
T Consensus 266 ~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad 345 (460)
T PRK11462 266 VAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSD 345 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788888899999999999999999987765554444344333322 23234445566788777777777777887
Q ss_pred cCCc-----ccc--chHHHHHHHHHHHHHHHHHHhccccc
Q 016350 169 VSPP-----FVR--GTYGAFIQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 169 ~~~~-----~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (391)
..+. .+| |...+......-+|..+++.+++.+.
T Consensus 346 ~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 346 TVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred hHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7652 133 44445555666666666665554443
No 232
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.64 E-value=6.7e-08 Score=87.13 Aligned_cols=116 Identities=17% Similarity=0.146 Sum_probs=81.1
Q ss_pred cchHHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh--hh--hHHHHH
Q 016350 71 NEPLESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT--TR--NLIGML 145 (391)
Q Consensus 71 ~~~~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~--~~--~~~~l~ 145 (391)
....|.+. +.+|.+..+. +++.+.+.++..++.+++|+++||+|||+.+..+......+..+..+ .+ +.....
T Consensus 245 ~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (366)
T TIGR00886 245 SSIFAMFFKDQFGLSKVTA--GAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFI 322 (366)
T ss_pred HHHHHHHHHHHcCCcHHHH--HHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHH
Confidence 34445444 5578877666 78888888899999999999999999998888777666666555443 22 455444
Q ss_pred HHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHH
Q 016350 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLG 189 (391)
Q Consensus 146 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 189 (391)
+.-.+.+++.|...+....++.|..| +++|.+.|+.+....+|
T Consensus 323 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 323 VLFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 44444444455555555567778776 68999999988766554
No 233
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.63 E-value=3.7e-07 Score=79.39 Aligned_cols=168 Identities=14% Similarity=0.114 Sum_probs=127.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhcccchHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHH
Q 016350 49 SFPHVLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALP 127 (391)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~ 127 (391)
+.+.+....++.|++.-........++.+.+| .|+++.+. +...+.+..+..+|.++..++..|+...|++....++
T Consensus 234 ~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~a--a~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~ 311 (422)
T COG0738 234 QNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQA--AYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALI 311 (422)
T ss_pred hChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 34456666677777766666677778877777 77776666 7889999999999999999999999999999999988
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchh
Q 016350 128 MIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (391)
Q Consensus 128 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (391)
..+.++..+++++... +.+-++.|+..+..+|+..+...+..| ++ ....|..-....+|..+.|.+-|++.+..+ -
T Consensus 312 ~ill~~~~~l~~g~v~-~~~l~~ig~F~simfPTIfslal~~l~-~~-ts~~s~~l~maivGGAiiP~l~G~i~d~~g-~ 387 (422)
T COG0738 312 AILLLLAVALIGGVVA-LYALFLIGLFNSIMFPTIFSLALKNLG-EH-TSVGSGLLVMAIVGGAIIPPLQGVIADMFG-I 387 (422)
T ss_pred HHHHHHHHHHhcChHH-HHHHHHHHHHhHHHHHHHHHHHHhccC-cc-ccccceeeeeheecchHHHHHHHHHHHhhh-h
Confidence 8888888888888444 345678888899999999999999998 33 334444445556788888888899999888 4
Q ss_pred HHHHHHHHHHHHHHH
Q 016350 208 RICFWVSIVPAAILC 222 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~ 222 (391)
...+.....++.+.+
T Consensus 388 ~~~~~~~pllc~lyV 402 (422)
T COG0738 388 QLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666553333333333
No 234
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.62 E-value=1e-06 Score=82.18 Aligned_cols=135 Identities=10% Similarity=0.003 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHH-------HHHhhHHHHHHHHHHH-----hh-----hhHHHHHHHHHHhhh
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRA-------FQLCALPMIIGASISA-----TT-----RNLIGMLLGRFVVGT 153 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-------l~~~~~~~~i~~~~~~-----~~-----~~~~~l~~~r~l~G~ 153 (391)
+++.+...+...+..++.+++.||+|+|+. +.+|+++.+++.+..+ ++ .++++++..-++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 466666667777889999999999999973 6677777776654321 21 356778888999999
Q ss_pred ccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc---------ccchhHHHHHHHHHHHHHHHHH
Q 016350 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE---------IAGWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 154 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---------~~~~w~~~f~~~~~~~~~~~~~ 224 (391)
|.+...+....++.+..|++.++.++|++.....+|..++..++..... ..+...+.|...++..++..+.
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988887754421 0111355666655555554444
Q ss_pred h
Q 016350 225 M 225 (391)
Q Consensus 225 ~ 225 (391)
+
T Consensus 472 ~ 472 (489)
T PRK10207 472 M 472 (489)
T ss_pred H
Confidence 3
No 235
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.60 E-value=1.6e-06 Score=76.16 Aligned_cols=146 Identities=15% Similarity=0.204 Sum_probs=117.8
Q ss_pred HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhHHHHHhhHHHHHHHHHH---HhhhhHHHHHHHHHHhhh
Q 016350 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASIS---ATTRNLIGMLLGRFVVGT 153 (391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~i~~~~~---~~~~~~~~l~~~r~l~G~ 153 (391)
.+-||++.++. ..++..+..|..++-...|++.. |.++|+.-..++....++..+. +...+.+.+...-++.|+
T Consensus 236 g~Vfgmsv~eT--T~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~ 313 (403)
T PF03209_consen 236 GEVFGMSVGET--TRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGL 313 (403)
T ss_pred hHHcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 44589998887 78899999999999999998877 7888888878888777776654 344678888899999999
Q ss_pred ccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc---------hhHHHHHHHHHHHHHHHHH
Q 016350 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG---------WWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 154 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---------~w~~~f~~~~~~~~~~~~~ 224 (391)
+.|.......+..-|...+++.|..+|.++..+.++..++..+|+.+.|... .|..+|.+-++..++.+++
T Consensus 314 g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 314 GNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred hhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887654221 2566777766655555444
Q ss_pred h
Q 016350 225 M 225 (391)
Q Consensus 225 ~ 225 (391)
.
T Consensus 394 l 394 (403)
T PF03209_consen 394 L 394 (403)
T ss_pred H
Confidence 4
No 236
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.56 E-value=4.1e-05 Score=69.29 Aligned_cols=304 Identities=15% Similarity=0.036 Sum_probs=152.5
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHH----HHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCL----GGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~----~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
...+..++++...+.-+.....|-+..+... +.. +..++|. +...+.++..|.+.||..|.++.-.+.+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p--~sL---l~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Q 78 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFP--GSL---LPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQ 78 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCc---HHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHH
Confidence 3456667777777777767777777776642 222 3344443 344577888889999999999877776555
Q ss_pred HHHHHHHHhh--------h----hHHHH---HHHHHHhhhccchh-hHHHHHHHhhcCC------ccccchHHHHHHHHH
Q 016350 129 IIGASISATT--------R----NLIGM---LLGRFVVGTGMGLG-PTVAALYVTEVSP------PFVRGTYGAFIQIAT 186 (391)
Q Consensus 129 ~i~~~~~~~~--------~----~~~~l---~~~r~l~G~~~g~~-~~~~~~~i~~~~~------~~~r~~~~~~~~~~~ 186 (391)
-++-.+++.. + +-+.. ++.-.+.|.-.-.. .....++--||.. ++.+.+..+...-.-
T Consensus 79 n~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRID 158 (432)
T PF06963_consen 79 NLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRID 158 (432)
T ss_pred HHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHH
Confidence 4433332211 1 01111 11111222111111 1111222234532 333444455555555
Q ss_pred HHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHh-hc----cccchhHHHHcCCHHHHHHHHHHHhCCCCchhHH
Q 016350 187 CLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAM-VF----CAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSL 261 (391)
Q Consensus 187 ~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~-~~----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (391)
-+..+++|++.|.+.+..+ .+....+.+...++..+.= ++ ....|+-..++.++++..+.... .........
T Consensus 159 L~ckllaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~--~~~~~~~~~ 235 (432)
T PF06963_consen 159 LFCKLLAPLFVGLLMTFAS-PVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEE--SSSESSSDP 235 (432)
T ss_pred HHHHHHHHHHHHHHhhccC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccccccc--ccccccchh
Confidence 5678999999999988777 5665555555444433322 11 12223211111111110000000 000000000
Q ss_pred HHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHH
Q 016350 262 AELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVA 341 (391)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (391)
...++..+.-......|+..++.+.+...+...++++ ...+.......|+... +.++...|..-....+.++.|.++.
T Consensus 236 ~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~-TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~ 313 (432)
T PF06963_consen 236 SILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYF-TVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVY 313 (432)
T ss_pred hHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHH-HHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001111112345666777666655444444443 3333344445555443 4444445667777888899999999
Q ss_pred HHHHhhhCchHHHHHHHHHHHHHHH
Q 016350 342 MVLMDKLGRKALLQWSFFSMAVSMA 366 (391)
Q Consensus 342 g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (391)
.++.+|+|..+.-..+......++.
T Consensus 314 p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 314 PWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHhcchhhHHHHHHHHHHHHH
Confidence 9999999988777776665544433
No 237
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.56 E-value=3.5e-06 Score=64.76 Aligned_cols=106 Identities=17% Similarity=0.094 Sum_probs=89.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCcc
Q 016350 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF 173 (391)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 173 (391)
.++......+.+++.+.+.+++|.|+.+++|.+...+-... -+-++.+.++.+-++.|++.+..++....++.+..+++
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 45555667788899999999999999999999988864443 35677889999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhcccc
Q 016350 174 VRGTYGAFIQIATCLGLMGSLLIGIPV 200 (391)
Q Consensus 174 ~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (391)
+|++..++.......+.++|.++...+
T Consensus 122 ~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 122 TIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998888888888887765443
No 238
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.55 E-value=3.2e-06 Score=80.10 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHH---HHHHHHHhhhccchhhHHHHHHHhh
Q 016350 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIG---MLLGRFVVGTGMGLGPTVAALYVTE 168 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~---l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (391)
+................+...|++|||.....+.++..++.+..++..+... ..+...+...+.+..+.....+.+|
T Consensus 354 ~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 433 (521)
T KOG0255|consen 354 LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAE 433 (521)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444444555666689999999999999999999999999988865443 5555666666677777777899999
Q ss_pred cCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccccch
Q 016350 169 VSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAESP 232 (391)
Q Consensus 169 ~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~ 232 (391)
.+|...|+.+.+.......+|.+++|.+-.........+.... ......+...+...++||+.
T Consensus 434 l~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 434 LIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFPLLGLIL-FGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchHHH-HHHHHHHHHHHHHhcCcccC
Confidence 9999999999999999999999999988755444221122222 22333333444558889984
No 239
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.37 E-value=0.00023 Score=65.63 Aligned_cols=285 Identities=9% Similarity=0.058 Sum_probs=146.4
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhcc---CcchhHHHHHHHHHHH-HHHHHHHHHHHhhhcchhhHHHH
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGF---NGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAFQ 122 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l~ 122 (391)
+..++.++.+.+..++..++.+.. -++.+.+=+ +.+.+ .++-....+ ...+......+++++++|.+++-
T Consensus 20 ~~E~~k~~~l~~m~f~i~f~y~~l----R~~KD~lvvt~~gae~I--~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy 93 (491)
T PF03219_consen 20 RSELKKFLPLALMFFFILFNYTIL----RDLKDTLVVTAQGAEVI--PFLKVWGVLPVAILFTILYSKLSNRLSREKLFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHhcCeEEEecCChhHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 344555556666666655555432 222222211 22222 444443333 44566778999999999999888
Q ss_pred HhhHHHHHHHHHHHhh---------hh----------------------HHHHHHHHHHhhhccchhhH-HHHHHHhhcC
Q 016350 123 LCALPMIIGASISATT---------RN----------------------LIGMLLGRFVVGTGMGLGPT-VAALYVTEVS 170 (391)
Q Consensus 123 ~~~~~~~i~~~~~~~~---------~~----------------------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~ 170 (391)
+....+...-.+.++. ++ .|...+.-+..-+-.....+ .-..+..|.+
T Consensus 94 ~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~it 173 (491)
T PF03219_consen 94 IIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEIT 173 (491)
T ss_pred HHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7766666555555542 11 12222222333332233333 4578889999
Q ss_pred CccccchHHHHHHHHHHHHHHHHHHhcccccc--------ccchhHHHHHH-HHHHHHHH---HHHhhccccchhHHHHc
Q 016350 171 PPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE--------IAGWWRICFWV-SIVPAAIL---CLAMVFCAESPHWLYKK 238 (391)
Q Consensus 171 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--------~~~~w~~~f~~-~~~~~~~~---~~~~~~~~e~~~~~~~~ 238 (391)
+.+|-.|..++.+.+.++|.+++..+...+.+ ....|...... .++..+.. .....++.+. ...+
T Consensus 174 t~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~---vl~~ 250 (491)
T PF03219_consen 174 TVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKN---VLTD 250 (491)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCc
Confidence 99999999999999999999988888777766 11125543322 22222222 1122222110 0000
Q ss_pred CCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhh
Q 016350 239 GRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS 318 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (391)
++..+.. ...+.++.+..-..+.+.++++|....+.+...++...........-....+.+..
T Consensus 251 ~~~~~~~-----------------~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~ 313 (491)
T PF03219_consen 251 PRFYPSA-----------------KKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPD 313 (491)
T ss_pred cccchhh-----------------hcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 0000000 00001112222234556677777777666655555444333222222222222211
Q ss_pred cCCC---hhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHH
Q 016350 319 AGLS---SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWS 357 (391)
Q Consensus 319 ~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 357 (391)
...- .|......++..++..++++.+.+|+|-+....+.
T Consensus 314 ~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 314 PNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 1110 23355566777777778899999999987766553
No 240
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.35 E-value=2.2e-05 Score=72.02 Aligned_cols=143 Identities=15% Similarity=0.143 Sum_probs=89.3
Q ss_pred chHHHhHh-hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH-----hhhhHHHHH
Q 016350 72 EPLESISL-DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA-----TTRNLIGML 145 (391)
Q Consensus 72 ~~~~~i~~-~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~-----~~~~~~~l~ 145 (391)
...|.+.+ .+|.+..+. ++.......+..+++.+.+.+.++.++++.......+..++.++.. ..+++...+
T Consensus 239 ~~~P~~l~~~~g~s~~~~--gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~ 316 (413)
T PRK15403 239 AVSPVILIDAGGMTTSQF--AWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSV 316 (413)
T ss_pred HhChHHHHHhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHH
Confidence 34565554 458877766 7877777778888888888876544444433322223333332222 123444456
Q ss_pred HHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHH
Q 016350 146 LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (391)
Q Consensus 146 ~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~ 219 (391)
+..++.|+|.+...+......- .-....+|++.++.+.....+..+++..++++.++.. ++.|...++...
T Consensus 317 ~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~ 387 (413)
T PRK15403 317 LGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGG--RLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--chHHHHHHHHHH
Confidence 7888889988888877764332 2223358999999998888888888888888766643 555555444333
No 241
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.35 E-value=1.9e-06 Score=57.53 Aligned_cols=70 Identities=24% Similarity=0.354 Sum_probs=59.2
Q ss_pred HHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH
Q 016350 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM 128 (391)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 128 (391)
-..+++.....+...|.+|...++.|++..++ |.+.++..+...++++++|.++||+|+++..+....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~i--Gil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQLGLSPSQI--GILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 34456666667778899999999999998887 99999999999999999999999999999887766543
No 242
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.31 E-value=9.3e-06 Score=74.72 Aligned_cols=140 Identities=14% Similarity=0.062 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcch-hhHHHHHhhHHHHHHHHHHHhhhh---------------------HHHHHHHHH
Q 016350 92 LVVSMCLGGAFIGSTLSGWIADGVG-RRRAFQLCALPMIIGASISATTRN---------------------LIGMLLGRF 149 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~i~~~~~~~~~~---------------------~~~l~~~r~ 149 (391)
|....+.+...+.+++..++.+|+| ||++..++.++.+++.+...+.++ .+..++.-.
T Consensus 309 ~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 388 (477)
T TIGR01301 309 FGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFA 388 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHH
Confidence 4444455555577778889999999 477779998888888887776543 366777889
Q ss_pred HhhhccchhhHHHHHHHhhcCCc--cccchHHHHHHHHHHHHHHHHHHhccccccccc-hhHHHHHHHHHHHHHHHHHh-
Q 016350 150 VVGTGMGLGPTVAALYVTEVSPP--FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPAAILCLAM- 225 (391)
Q Consensus 150 l~G~~~g~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~w~~~f~~~~~~~~~~~~~~- 225 (391)
+.|+..+......++++++..++ ++.|..+|+.+.+..+..++..+..+.+.+..| .-.+.+.+.++..++..+..
T Consensus 389 ~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 389 ILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred HhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999985 455999999999999999988877776544333 23567777888887776655
Q ss_pred hccccc
Q 016350 226 VFCAES 231 (391)
Q Consensus 226 ~~~~e~ 231 (391)
+.+|+.
T Consensus 469 ~~~~~~ 474 (477)
T TIGR01301 469 ILLPRP 474 (477)
T ss_pred HhCCCC
Confidence 446654
No 243
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.29 E-value=7.3e-06 Score=67.31 Aligned_cols=266 Identities=16% Similarity=0.189 Sum_probs=139.7
Q ss_pred cccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHH
Q 016350 69 VVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGR 148 (391)
Q Consensus 69 ~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r 148 (391)
..+|..-.+.+.++....++ |.+....+-...+...+.|-++|+-|||+.-+.-++...++ .+.-.++.|..++++|
T Consensus 55 LQgPYvYyLYstYgFgkG~I--gqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs-CiTKhSpqYkVLmVGR 131 (454)
T KOG4332|consen 55 LQGPYVYYLYSTYGFGKGDI--GQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS-CITKHSPQYKVLMVGR 131 (454)
T ss_pred hcCceeeeeehhcCccCCcc--ceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHH-HHhhcCCceEEEeehh
Confidence 34666777778888888877 55555555566777888999999999999644333333332 2344578899999999
Q ss_pred HHhhhccchhhHHHHHH-HhhcCCccccchHHHHHH--------HHHHHHHHHHHHhccccccccc-hhHHHHHHHHHHH
Q 016350 149 FVVGTGMGLGPTVAALY-VTEVSPPFVRGTYGAFIQ--------IATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPA 218 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~g~~~~~~~~~~l~~~~~-~w~~~f~~~~~~~ 218 (391)
++-|+..+..+.+.-++ ++|.- ++|+.-.-+.. .++.+-.+++.+.+-.+.+..+ +--.+|-..+...
T Consensus 132 ~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfL 209 (454)
T KOG4332|consen 132 VLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFL 209 (454)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHH
Confidence 99999999988877665 55654 23443222211 2233334445555555554332 0233444433332
Q ss_pred HHH-HHHhhccccchhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHH
Q 016350 219 AIL-CLAMVFCAESPHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLF 297 (391)
Q Consensus 219 ~~~-~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (391)
.+. .+..-- |-..-+++.|.++.+....+. .+.+..+++...+-....++
T Consensus 210 aigmAvil~~------W~ENygdps~~kdlltqf~ga-----------------------a~aiaSD~ki~LLG~iqsLF 260 (454)
T KOG4332|consen 210 AIGMAVILSS------WSENYGDPSENKDLLTQFKGA-----------------------ARAIASDEKIALLGAIQSLF 260 (454)
T ss_pred HHHHHHHHhh------hhhccCChhhhHHHHHHhhHh-----------------------HHHHhcchHHHHHHHHHHHH
Confidence 222 222211 222234444444333332211 11122223332222222222
Q ss_pred HHHhhhc-hhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCc--hHHHHHHHHHHHHHHHHHHHH
Q 016350 298 ALQQLSG-INAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGR--KALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 298 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~~~~~~~~~~ 371 (391)
-...+.. +-|.|...| +..+..-|.++..+.++.++|+-+..++..|-.. ...+.+.+.+..+.+.+....
T Consensus 261 E~smytFVFLWTPaLsp---n~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt 334 (454)
T KOG4332|consen 261 EGSMYTFVFLWTPALSP---NDEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILT 334 (454)
T ss_pred hhhhheeeeeecccCCC---CcccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 2222221 112222222 1233445778888888888888887777665432 345555665555555554433
No 244
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.24 E-value=2.3e-05 Score=73.55 Aligned_cols=146 Identities=16% Similarity=0.085 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHHHhHhh-hccCcch-hHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHH-HHHhhHH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNT-LAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRA-FQLCALP 127 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~-~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~ 127 (391)
+.+.+..+..++.++.........|..... |+-+... ...++....+.++..++..+.|.+..+++|-|. ++++.++
T Consensus 310 r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~ 389 (599)
T PF06609_consen 310 RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVL 389 (599)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHH
Confidence 445555556666666665555666655443 4433321 122678888888999999999999998887544 4566666
Q ss_pred HHHHHHHHHh--hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHh
Q 016350 128 MIIGASISAT--TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI 196 (391)
Q Consensus 128 ~~i~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 196 (391)
+.++..+++. .+|....+..-++.|++.|...........-..|+++-+.+.++....-.+|..+|..+
T Consensus 390 ~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 390 MTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred HHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHH
Confidence 6654444333 34666667888999999999988888878888899999999998887777776666544
No 245
>PTZ00207 hypothetical protein; Provisional
Probab=98.21 E-value=2.1e-05 Score=74.13 Aligned_cols=178 Identities=12% Similarity=-0.044 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhh-ccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc---------chhhHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDL-GFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG---------VGRRRAF 121 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr---------~Grr~~l 121 (391)
-++++++..+...-....+..-+.+|.+.+ |.+.+......+++++.++..+|-+..|.+... +.|--.+
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l 433 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIAL 433 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHH
Confidence 355666666655555555555677888888 653333110236888888999999999987721 2222233
Q ss_pred HHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHH-HHhcccc
Q 016350 122 QLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGS-LLIGIPV 200 (391)
Q Consensus 122 ~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~-~~~~~~l 200 (391)
.+..+ +.++.++.++.-....+++.-++.|++.|..++.....++|+|. |+-|+-..+......+|..+- ..+.|.+
T Consensus 434 ~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~ 511 (591)
T PTZ00207 434 FIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEW 511 (591)
T ss_pred HHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHH
Confidence 33444 66666666666444789999999999999999999999999999 889999888888888887665 4555555
Q ss_pred ccccc----h--------hHHHHHHHHHHHHHHHHHh-hccccc
Q 016350 201 KEIAG----W--------WRICFWVSIVPAAILCLAM-VFCAES 231 (391)
Q Consensus 201 ~~~~~----~--------w~~~f~~~~~~~~~~~~~~-~~~~e~ 231 (391)
.+... . .|..|++.+..++...+.. +..-++
T Consensus 512 Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~ 555 (591)
T PTZ00207 512 YTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQY 555 (591)
T ss_pred HHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeeh
Confidence 43221 1 6778888777777665544 333344
No 246
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.19 E-value=0.0014 Score=59.15 Aligned_cols=288 Identities=11% Similarity=0.059 Sum_probs=155.9
Q ss_pred chhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcc-hhHHHHHHHHHHH-HHHHHHHHHHHhhhcchhhHHHHHh
Q 016350 47 KLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGN-TLAEGLVVSMCLG-GAFIGSTLSGWIADGVGRRRAFQLC 124 (391)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~ 124 (391)
+..+..++.+.+..+...++.+ .+-.+.+.+.++.. ...++++-+..-+ +..+..++.+++.+++.|.+++-..
T Consensus 23 r~E~~kflpl~Ll~f~I~~ny~----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~ 98 (509)
T COG3202 23 RYELKKFLPLALLFFCILFNYN----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYII 98 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 3445555555555555555554 34445666655421 1223677777766 6678899999999999999998888
Q ss_pred hHHHHHHHHHHHhh---------hh-----------------------HHHHHHHHHHhhhccchhhH-HHHHHHhhcCC
Q 016350 125 ALPMIIGASISATT---------RN-----------------------LIGMLLGRFVVGTGMGLGPT-VAALYVTEVSP 171 (391)
Q Consensus 125 ~~~~~i~~~~~~~~---------~~-----------------------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~ 171 (391)
+..+...-+++++. ++ .|...+.-.+.=+=...... .-.....|.+.
T Consensus 99 ~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt 178 (509)
T COG3202 99 LGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT 178 (509)
T ss_pred HHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 77777777776653 11 02222222222221222222 44567789999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHhccccccccch---------hHHHHHHHHHHHHHHHHHhhc----cccchhHHHHc
Q 016350 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW---------WRICFWVSIVPAAILCLAMVF----CAESPHWLYKK 238 (391)
Q Consensus 172 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~---------w~~~f~~~~~~~~~~~~~~~~----~~e~~~~~~~~ 238 (391)
.++-.|..++++.+.+++..++..+..++...... -+..+.+.+..+++++.+..+ .+++|+....+
T Consensus 179 ~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~ 258 (509)
T COG3202 179 IEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRA 258 (509)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHH
Confidence 99999999999999999999988888887764321 122333333333333333322 22333322110
Q ss_pred CCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhh
Q 016350 239 GRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKS 318 (391)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (391)
.+++ +.++.+..-..+.+-+.++|....+.+...++..+...... .+-..+...
T Consensus 259 ~~kk-----------------------~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~---~wKs~ik~~ 312 (509)
T COG3202 259 KKKK-----------------------KKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEG---VWKSGIKEL 312 (509)
T ss_pred hccc-----------------------ccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH---HHHHhHHHh
Confidence 0000 00011111223444556677776665555554443322221 222222111
Q ss_pred cCCC------hhHHHHHHHHH-HHHHHHHHHHHHhhhCchHHHHHHHHHHHHH
Q 016350 319 AGLS------SGLANVFVGIA-NLLGSVVAMVLMDKLGRKALLQWSFFSMAVS 364 (391)
Q Consensus 319 ~~~~------~~~~~~~~~~~-~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (391)
.+.. .+......++. .++...+++-+.+|.|-....++.-+++.++
T Consensus 313 ~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 313 YPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 1111 12244555555 5566778889999998776666554444444
No 247
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.17 E-value=0.00018 Score=62.36 Aligned_cols=151 Identities=12% Similarity=0.085 Sum_probs=98.4
Q ss_pred cchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-----cchhhHH
Q 016350 46 WKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-----GVGRRRA 120 (391)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-----r~Grr~~ 120 (391)
.+...+.+..+.+.+.+.+...+... .+|.+.+.-|.|.++. +...-+| ..+ ---+.|.++.| |+||||.
T Consensus 26 ~~~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~--a~fS~ay-~P~-sLKllWaPiVDs~y~k~~Grrks 100 (510)
T KOG3574|consen 26 LKGDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQ--AIFSFAY-WPF-SLKLLWAPIVDSVYSKRFGRRKS 100 (510)
T ss_pred hhhhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhh--hhhhhhh-hHH-HHHHHHHhhhHHHHHHhhccccc
Confidence 45556667778888888888888877 8999999888877665 3332222 222 34577889999 9999987
Q ss_pred HHH-hhHHHHHHHHHHHh-----------hhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHH
Q 016350 121 FQL-CALPMIIGASISAT-----------TRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCL 188 (391)
Q Consensus 121 l~~-~~~~~~i~~~~~~~-----------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 188 (391)
.++ +..+.+..+...+. .++...+....++.-+.++.--.+.-.+.-.+..+++-|-+......+...
T Consensus 101 Wvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~ 180 (510)
T KOG3574|consen 101 WVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTA 180 (510)
T ss_pred eeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhh
Confidence 554 44444444444332 234444444556666666666666666667777788887777777777777
Q ss_pred HHHHHHHhccccc
Q 016350 189 GLMGSLLIGIPVK 201 (391)
Q Consensus 189 g~~~~~~~~~~l~ 201 (391)
|..++..+--.+.
T Consensus 181 GyfL~~~ifLaL~ 193 (510)
T KOG3574|consen 181 GYFLGNVVFLALE 193 (510)
T ss_pred hHHhhcceeeEec
Confidence 7766665544433
No 248
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.11 E-value=9.2e-05 Score=68.47 Aligned_cols=159 Identities=16% Similarity=0.091 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhh-hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc----chhhHHHHHhhH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLD-LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG----VGRRRAFQLCAL 126 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~~~ 126 (391)
.++..++..+......+.....+|.+.++ .|.+..+. ..+...+.++.+++.+++|+++|| ..+|........
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a--~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~ 351 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQA--NLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLC 351 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHh--ccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34566667777777777778889988888 34555555 788899999999999999999999 677777666665
Q ss_pred HHHHHH-HHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccc-hHHHHHHHHHHHHH-HHHHHhccccccc
Q 016350 127 PMIIGA-SISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRG-TYGAFIQIATCLGL-MGSLLIGIPVKEI 203 (391)
Q Consensus 127 ~~~i~~-~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~-~~~~~~~~~~~~g~-~~~~~~~~~l~~~ 203 (391)
+..+.. +.....++......+-+....+.....+.......+...++.|. ...+....+.+.+. +.++..-+...+.
T Consensus 352 ~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~ 431 (495)
T KOG2533|consen 352 LYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR 431 (495)
T ss_pred HHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc
Confidence 555444 44444443444444444445556666667777777777654433 33444444444444 4444444445555
Q ss_pred cchhHHHHHH
Q 016350 204 AGWWRICFWV 213 (391)
Q Consensus 204 ~~~w~~~f~~ 213 (391)
++ |.+.|..
T Consensus 432 y~-~~~~f~~ 440 (495)
T KOG2533|consen 432 YG-WGAVFYM 440 (495)
T ss_pred hh-hhhHHHH
Confidence 56 7888744
No 249
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.10 E-value=2.6e-05 Score=66.50 Aligned_cols=287 Identities=12% Similarity=0.049 Sum_probs=157.6
Q ss_pred HHHhH-hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 016350 74 LESIS-LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVG 152 (391)
Q Consensus 74 ~~~i~-~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G 152 (391)
.|.+. .+.|+++++.. .=+.-...-.+.+.-.+.=.+.|..--|++++.-.+.......+.-+.++.+.+-+.-++.|
T Consensus 28 tpyl~gp~~NlT~~~l~-~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG 106 (433)
T KOG3810|consen 28 TPYLLGPDKNLTEDQLT-NEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYG 106 (433)
T ss_pred chhccCCCCCccHHHHh-cccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcC
Confidence 34333 34566655442 12222333445566667778999999999998888888888888889999999988888888
Q ss_pred hccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch-hHHHHHHHHHHHHHHHHHhhccccc
Q 016350 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-WRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 153 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
...+. ..+-++++-+..+|+++.++.+...+..-.|...|..++..+.+.... +...=.+......+..+..+++|..
T Consensus 107 ~~tAa-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v 185 (433)
T KOG3810|consen 107 PATAA-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRV 185 (433)
T ss_pred hHHHH-HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCC
Confidence 85443 457778888888999999999999999999998888888877765530 2223233333333344455777776
Q ss_pred hhHHHHcCCHHHHHHHHHHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHHHHhhhchhhHHHh
Q 016350 232 PHWLYKKGRTAEAEAEFEKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYF 311 (391)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (391)
++...-+.++++.. ..+....+. +....+..+ ..-.....++.+..++|....-.+-..+. .++++-...|
T Consensus 186 ~rSl~f~~~~~~~~--v~~~e~~~~-~~~~~~~l~--~~~~~l~~~l~~~y~np~ll~WSlWwAl~----scg~~QV~nY 256 (433)
T KOG3810|consen 186 KRSLYFHRLEDKIS--VGDLEEMNP-QASYMSYLR--GAFVLLWRDLQECYSNPRLLKWSLWWALA----SCGYYQVTNY 256 (433)
T ss_pred chhhhhhcccccce--eccchhcCc-cchhhHHHH--HHHHHHHHHHHHHhcCchhhhhHHHHHHh----hchhHHHHHH
Confidence 54333222222110 000000000 000000000 00000011233344555443222222222 2233444555
Q ss_pred HHHHHhhc-CCC----hhHHHHHHHHHHHHHHHHHHHHHhhhCch--HHHHHHHHHHHHHHHHHHHH
Q 016350 312 SSSVFKSA-GLS----SGLANVFVGIANLLGSVVAMVLMDKLGRK--ALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 312 ~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~~~~~~~~ 371 (391)
.+..-+.- +.. .|..=....+.+.++.+..|++.-++.|+ .++.++.+..+...+.+...
T Consensus 257 ~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t 323 (433)
T KOG3810|consen 257 TQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQT 323 (433)
T ss_pred HHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcc
Confidence 55544443 222 23455566677888888999987666654 23334444444444444433
No 250
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.96 E-value=0.00013 Score=64.90 Aligned_cols=130 Identities=16% Similarity=0.105 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCc
Q 016350 93 VVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPP 172 (391)
Q Consensus 93 ~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 172 (391)
+.-+-.+...+.-+.+.+..+|+..+.=...+..++.++.++.++++|.+.-+++-++.+++.|........+ +..+++
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l-t~~y~~ 142 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL-THFYGK 142 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH-HHhcCc
Confidence 4444445666777788889998876555566777888899999999999999999999999999998887776 445653
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhccccccccc-hhHHHHHHHHHHHHHHHHHhhcc
Q 016350 173 FVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG-WWRICFWVSIVPAAILCLAMVFC 228 (391)
Q Consensus 173 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~w~~~f~~~~~~~~~~~~~~~~~ 228 (391)
..++-++.+.+.+.++|+..-..+.+ .+ .-|..+.+...+.++..+.++++
T Consensus 143 ----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 143 ----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred ----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 34677777777777777766555554 33 13666666655555555544443
No 251
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.93 E-value=0.00016 Score=66.45 Aligned_cols=123 Identities=15% Similarity=0.097 Sum_probs=104.9
Q ss_pred HHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHH-HhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhh
Q 016350 75 ESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSG-WIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGT 153 (391)
Q Consensus 75 ~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g-~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 153 (391)
-.....++++.++. +...+.......+++.+.. .+...+|-|++...|+..-.+.....+++++.|++....++.++
T Consensus 266 ~yl~~~f~w~~~~~--s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~ 343 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEF--SDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVAL 343 (463)
T ss_pred EEEeeecCcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHh
Confidence 34566788887777 7777777777777777777 78888999999999999999999999999999999999888887
Q ss_pred ccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccc
Q 016350 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (391)
Q Consensus 154 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (391)
.+...+...+.++.+..++++|++.++......+..+++|.+-+.+
T Consensus 344 -~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 344 -AGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred -hcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 5666678889999999999999999999999999988888776554
No 252
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.89 E-value=0.00053 Score=63.63 Aligned_cols=110 Identities=19% Similarity=0.159 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchh--h----H-HHHHhhHHHHHHHHHHHhh---------hhHHHHHHHHHHhhhc
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGR--R----R-AFQLCALPMIIGASISATT---------RNLIGMLLGRFVVGTG 154 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Gr--r----~-~l~~~~~~~~i~~~~~~~~---------~~~~~l~~~r~l~G~~ 154 (391)
+|..++..+...+.+|+.+++-.|.+| | + =+.+|+++.+++.+...++ .+.+++++.-+++++|
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 577888877777788887777666533 2 1 1567777777776655432 2567788999999999
Q ss_pred cchhhHHHHHHHhhcCCccccchHHHHHHHH-HHHHHHHHHHhcccc
Q 016350 155 MGLGPTVAALYVTEVSPPFVRGTYGAFIQIA-TCLGLMGSLLIGIPV 200 (391)
Q Consensus 155 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~~~~~~~~l 200 (391)
.=...|...+++++..|++.||+.+|.+... ..+|..++..++...
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999764 367777777666554
No 253
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.81 E-value=0.00017 Score=62.70 Aligned_cols=122 Identities=14% Similarity=0.046 Sum_probs=102.4
Q ss_pred hhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcch--hhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccc
Q 016350 79 LDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVG--RRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMG 156 (391)
Q Consensus 79 ~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g 156 (391)
+.+|.++.+. |-+.+...+...+.+....+..||.. -+-.+..++.++.=..++.+.++....+..+-.+-.+..+
T Consensus 290 ~rfg~ss~~~--G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 290 GRFGYSSMQQ--GKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTA 367 (451)
T ss_pred CccCCChhhh--eeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHH
Confidence 5567666555 77777777888888888888999988 7777777777777777778888888888888888888888
Q ss_pred hhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccccc
Q 016350 157 LGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (391)
Q Consensus 157 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (391)
...+....++....|.++||.++|+......++-.+||+++|....
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 8877888888999999999999999999999999999999987664
No 254
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.68 E-value=0.00027 Score=63.83 Aligned_cols=109 Identities=11% Similarity=0.148 Sum_probs=87.6
Q ss_pred HHHHHhhHHHHHHHHHHHhhh---h------HHHHHHHHHHhhhccchhhHHHHHHHhhcCCcc---ccchHHHHHHHHH
Q 016350 119 RAFQLCALPMIIGASISATTR---N------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPF---VRGTYGAFIQIAT 186 (391)
Q Consensus 119 ~~l~~~~~~~~i~~~~~~~~~---~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 186 (391)
|+++.+.++..+|.++..++. . ...++++-++.++|.|+.-+....+++|-++++ +|.+...++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888888888888854442 2 257888899999999999999999999999865 4566788889999
Q ss_pred HHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhcc
Q 016350 187 CLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFC 228 (391)
Q Consensus 187 ~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~ 228 (391)
++|..+++.+.+++.+..+ |.+.|.+.++..++.++.++.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~-~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYG-WFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccc-hhhhhhHHHHHHHHHHHHHHhC
Confidence 9999999999999998888 9999999887777766655443
No 255
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.68 E-value=0.00026 Score=63.10 Aligned_cols=107 Identities=19% Similarity=0.170 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHH--H---HHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHH
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPM--I---IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALY 165 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~--~---i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 165 (391)
.+....|.+|-.++.--. .-+--|++.+.+.+-. . +.....-+.++.+..++.-+..|+..|..++.....
T Consensus 284 ~~Y~~~YQ~GVFISRSS~----~~~rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF~~ 359 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSL----PFFRIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTFYR 359 (402)
T ss_pred HHHHHHHHHHHhhhhcce----eeeehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 566667776655543322 1222344444433222 2 222233356788888899999999999999999999
Q ss_pred HhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc
Q 016350 166 VTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 166 i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (391)
+.|-.++++|-.++|....+-++|..++.+++-.+-
T Consensus 360 I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 360 ISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998876543
No 256
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.45 E-value=0.00075 Score=45.08 Aligned_cols=66 Identities=9% Similarity=0.076 Sum_probs=44.1
Q ss_pred HHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHH
Q 016350 294 STLFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFS 360 (391)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 360 (391)
.++.+....+...+++.|..+ .+.+..+.|.+..+..+..+++.++.|.++||.++++........
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 334444433333444444443 344445567788888899999999999999999998877665443
No 257
>PRK03612 spermidine synthase; Provisional
Probab=97.41 E-value=0.02 Score=53.97 Aligned_cols=133 Identities=16% Similarity=0.078 Sum_probs=77.2
Q ss_pred hhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHH---HHHHHH----HhhhhH-HHHHHHHHHh
Q 016350 80 DLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMI---IGASIS----ATTRNL-IGMLLGRFVV 151 (391)
Q Consensus 80 ~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~---i~~~~~----~~~~~~-~~l~~~r~l~ 151 (391)
-+|-+.... +.+.++++.|.++|+..++++.++--++.. ..-+.+.. ++..+. ++...+ ..++..-++.
T Consensus 44 ~~G~s~~~~--~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 44 LLGDSVTQF--STVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HhCchHHHH--HHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445443333 899999999999999999988744333322 11111111 111111 111111 1223344566
Q ss_pred hhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc-cccchhHHHHHHHHH
Q 016350 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK-EIAGWWRICFWVSIV 216 (391)
Q Consensus 152 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~-~~~~~w~~~f~~~~~ 216 (391)
++..|+..|....+..+.. .++-++..|-......+|+++|.++.+++. ...|..+..+.+..+
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred HHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 7777888777766665432 223467788888889999999998877654 455645555554433
No 258
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.36 E-value=0.0071 Score=57.31 Aligned_cols=155 Identities=17% Similarity=0.256 Sum_probs=117.5
Q ss_pred hcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHhhHHHHHHHHHHHhhhh------
Q 016350 68 GVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLCALPMIIGASISATTRN------ 140 (391)
Q Consensus 68 ~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~~~~~~------ 140 (391)
......+..+..++|.+...+ .-.++.+.-.....++.+++++|- +||-+++.++.++..++..+..++..
T Consensus 55 g~~~nlv~ylt~~~~~~~~~a--a~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 55 GLVSNLVTYLTLELHASGGGA--ANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred cchhHHHHHHHHHhccchHHH--HHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 335667788888888876554 566777777777888999999996 78999999998888888665544321
Q ss_pred -------------------HHHHHHHHHHhhhccchhhHHHHHHHhhcCC---cc-c--cchHHHHHHHHHHHHHHHHHH
Q 016350 141 -------------------LIGMLLGRFVVGTGMGLGPTVAALYVTEVSP---PF-V--RGTYGAFIQIATCLGLMGSLL 195 (391)
Q Consensus 141 -------------------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---~~-~--r~~~~~~~~~~~~~g~~~~~~ 195 (391)
...+..+.-+..+|.|+.-+....+-+|-++ ++ . +..-+.++....++|..++..
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t 212 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQT 212 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHH
Confidence 1255666778888999998898899999988 32 2 235678888999999999999
Q ss_pred hccccccccchhHHHHHHHHHHHHHHHHHh
Q 016350 196 IGIPVKEIAGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 196 ~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
+-.+..+..+ |.+-|.+..+...+.++++
T Consensus 213 ~~vyiq~~~~-w~lgf~i~~~~~~lai~iF 241 (571)
T KOG1237|consen 213 VLVYIQDNVG-WKLGFGIPTVLNALAILIF 241 (571)
T ss_pred HHHhhhhccc-ceeeccHHHHHHHHHHHHH
Confidence 8888888888 9999988766665554444
No 259
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.24 E-value=0.017 Score=52.69 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHhh---hcchhhHHHHHhhHHHHHHHHHHHhh------------------hhHHHHHHHHHHhhhccch
Q 016350 99 GGAFIGSTLSGWIA---DGVGRRRAFQLCALPMIIGASISATT------------------RNLIGMLLGRFVVGTGMGL 157 (391)
Q Consensus 99 ~~~~i~~~~~g~l~---dr~Grr~~l~~~~~~~~i~~~~~~~~------------------~~~~~l~~~r~l~G~~~g~ 157 (391)
+|..++..+.+.+. +++||++.+.++..+..++.++.-.. +++...++.-++.|++-+.
T Consensus 290 ~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~ 369 (461)
T KOG3098|consen 290 LGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDAC 369 (461)
T ss_pred HHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHH
Confidence 34444555555665 45899999999999888888876543 2466778889999999999
Q ss_pred hhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccc
Q 016350 158 GPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (391)
Q Consensus 158 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (391)
.....+.++.+.+ +++|..+.++...-..++..++....+..
T Consensus 370 ~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 370 FNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 9999999999999 67799999998888888877766665443
No 260
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.11 E-value=0.0083 Score=54.64 Aligned_cols=146 Identities=14% Similarity=0.124 Sum_probs=102.5
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA 132 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~ 132 (391)
+....++..+-+++.-........+.+.-|+++... |..-+...+....+.+...++.+|+|..+.=+.+......+.
T Consensus 260 vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~i--gi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L 337 (432)
T PF06963_consen 260 VFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVI--GIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCL 337 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHH
Confidence 444455544445554445666666777779887766 888888888889999999999999999988777766554444
Q ss_pred HHHHh---h---h----hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcccc
Q 016350 133 SISAT---T---R----NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPV 200 (391)
Q Consensus 133 ~~~~~---~---~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 200 (391)
.++.. . + +...++.+-++.=+|.=+.-....-++.|..|+++||...|.-....++--++-..++-.+
T Consensus 338 ~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 338 ALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33322 1 2 3344444455555555555666777899999999999999999988888877777665543
No 261
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.11 E-value=0.031 Score=50.99 Aligned_cols=133 Identities=15% Similarity=0.017 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhh-------HHHHHhhHHHHHHHHHHHhh----------hhHHHHHHHHHHhhh
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR-------RAFQLCALPMIIGASISATT----------RNLIGMLLGRFVVGT 153 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr-------~~l~~~~~~~~i~~~~~~~~----------~~~~~l~~~r~l~G~ 153 (391)
+|..+...+.-.+.+++..++-.+.++| .-+-.++.+++.+.++.... .+.++++..-+++++
T Consensus 327 ~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~ 406 (498)
T COG3104 327 AWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSF 406 (498)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHH
Confidence 5778888777788888888777775554 23455666666665554433 357889999999999
Q ss_pred ccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc------cccchhHHHHHHHHHHHHHHHHH
Q 016350 154 GMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK------EIAGWWRICFWVSIVPAAILCLA 224 (391)
Q Consensus 154 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~------~~~~~w~~~f~~~~~~~~~~~~~ 224 (391)
|.=+..|...++++...|++-.+..++++-.....|..++..+++.-. +... -...|+..+...++..+.
T Consensus 407 gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~-~~~~F~~~g~v~i~~~~~ 482 (498)
T COG3104 407 GELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFI-EGRVFGTIGVVAIVIGIL 482 (498)
T ss_pred HHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhh-hhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888888888877776322 1222 345566555555554333
No 262
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.04 E-value=0.087 Score=45.36 Aligned_cols=73 Identities=12% Similarity=0.115 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCC
Q 016350 98 LGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (391)
Q Consensus 98 ~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 171 (391)
.+..+..+++.+.+..++|-|.++.++....... +..=+-+.+..++-.-...|++.+..+..--+|+++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3455567777779999999999998887765542 222344678889999999999999998777777766554
No 263
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.02 E-value=0.15 Score=45.64 Aligned_cols=168 Identities=12% Similarity=-0.053 Sum_probs=79.5
Q ss_pred HHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHH----HHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH
Q 016350 61 FLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFI----GSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (391)
Q Consensus 61 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i----~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 136 (391)
+-.-..++......+++.+++--++.+ .-....+.+...+ ....-..+.-|. |+++.........+..+.+.
T Consensus 28 iG~LlpWN~fiTa~~y~~~~~~~~~~~---~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l~ 103 (406)
T KOG1479|consen 28 IGTLLPWNMFITASDYYYYRFPGYHNS---KNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTLD 103 (406)
T ss_pred cccccchHhhhccHHHHHhhcCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 333445555666777777776544332 2334444444444 444444455552 22221111111222222222
Q ss_pred hh---------hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchh
Q 016350 137 TT---------RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWW 207 (391)
Q Consensus 137 ~~---------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w 207 (391)
++ ..+...++.-++.|++.|......+...++ +|+|.-+..++=.+.+..+-+++--+.-....+...+=
T Consensus 104 ~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~~~~~sA 182 (406)
T KOG1479|consen 104 LALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMSGQALAGTLTSLLRILTKAAFSDSRTSA 182 (406)
T ss_pred HHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHhcchhHhHHHHHHHHHHHHhcCCCCcee
Confidence 22 245666777788888888887777666555 55554333322222222222222222222222222212
Q ss_pred HHHHHHHHHHHHHHHHHhhccccchh
Q 016350 208 RICFWVSIVPAAILCLAMVFCAESPH 233 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~~~~~~~e~~~ 233 (391)
...|.+..+..+++.+....+|..|-
T Consensus 183 ~~yF~~s~~~~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 183 LIYFITSTVILLLCFVLYLVLPKLPF 208 (406)
T ss_pred ehhHHHHHHHHHHHHHHHHHhhcchH
Confidence 34555566666677777776776653
No 264
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.84 E-value=0.035 Score=51.05 Aligned_cols=89 Identities=12% Similarity=0.026 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHh----cccccccc-chhH--HHHH
Q 016350 140 NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLI----GIPVKEIA-GWWR--ICFW 212 (391)
Q Consensus 140 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~----~~~l~~~~-~~w~--~~f~ 212 (391)
.++..++.-++.|++.+........+.+ .+|++. +..+..+.+++.+++.++ -....+.. ..++ ..|.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~----~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~ 179 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY----SSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFG 179 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH----HHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHH
Confidence 4667777788899998888877777666 466543 334444444444433322 11111210 1022 2334
Q ss_pred HHHHHHHHHHHHhhccccchh
Q 016350 213 VSIVPAAILCLAMVFCAESPH 233 (391)
Q Consensus 213 ~~~~~~~~~~~~~~~~~e~~~ 233 (391)
+..++.+++++....++..|.
T Consensus 180 ~a~~v~l~~i~~~~~l~k~~~ 200 (437)
T TIGR00939 180 TPCVVQLICIVCYLLLPKLPF 200 (437)
T ss_pred HHHHHHHHHHHHHHHHhcCHH
Confidence 455555556666666666653
No 265
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.80 E-value=0.0046 Score=57.00 Aligned_cols=142 Identities=13% Similarity=0.054 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh-h---------hhHHHHHHHHHHhhhccchhh
Q 016350 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT-T---------RNLIGMLLGRFVVGTGMGLGP 159 (391)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~-~---------~~~~~l~~~r~l~G~~~g~~~ 159 (391)
.+.+..+..++..++........-++.-|+++..+.++.++.++.-.. . ++.+..+.--++..+..+..+
T Consensus 257 ~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~ 336 (433)
T PF03092_consen 257 YGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAF 336 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHH
Confidence 367777777888888888888888888899988888777766554221 1 122222334556666666667
Q ss_pred HHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccch-------hHHHHHHHHHHHHHHHHHhhccccc
Q 016350 160 TVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW-------WRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 160 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~-------w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
-....+++|..|+..-|...++.....++|..++..++..+.+..+. -.+..++..+..++.+.+..++|++
T Consensus 337 mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~ 415 (433)
T PF03092_consen 337 MPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQ 415 (433)
T ss_pred HHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 67778899999999999999999999999998888888777654431 1223334444455555555667775
No 266
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.62 E-value=0.014 Score=53.21 Aligned_cols=144 Identities=14% Similarity=0.044 Sum_probs=74.9
Q ss_pred HHHHHHHHHhhhhhhcccchHHHhHhh--hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhh-----cchhhHHHHH-hh
Q 016350 54 LVATLSSFLFGYHLGVVNEPLESISLD--LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIAD-----GVGRRRAFQL-CA 125 (391)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~d-----r~Grr~~l~~-~~ 125 (391)
.++.+.+++.+...+.....+|.+.++ -+.+.++. |.. |.-...+. .-++|.++.| |+||||..++ ..
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~--~~f-Sla~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q 78 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQ--AIF-SLASYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQ 78 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHh--eee-eeeechhH-HHHhhhhhhhhhcccccCCcchhhhHHH
Confidence 345566777777777666678888887 66666664 322 12111111 2344555555 8999988665 34
Q ss_pred HHHHHHHHHHHhhh----------------------hH--HHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHH
Q 016350 126 LPMIIGASISATTR----------------------NL--IGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAF 181 (391)
Q Consensus 126 ~~~~i~~~~~~~~~----------------------~~--~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~ 181 (391)
.+.++..+..+..- +. ..+....++.=+-++.--.+.-.+.-.+..+++++.|..-
T Consensus 79 ~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTc 158 (544)
T PF13000_consen 79 YLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTC 158 (544)
T ss_pred HHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHH
Confidence 44444444333211 01 1122222222222222222223333445567778777777
Q ss_pred HHHHHHHHHHHHHHhccccc
Q 016350 182 IQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 182 ~~~~~~~g~~~~~~~~~~l~ 201 (391)
...+.+.|..++..+--.+.
T Consensus 159 qtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 159 QTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred HHhHhhhhHHHHHHHHHhhC
Confidence 77777777666665543333
No 267
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.58 E-value=0.012 Score=53.79 Aligned_cols=70 Identities=16% Similarity=0.115 Sum_probs=57.4
Q ss_pred hhHHHhHHHHHhhcCCC-hhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhccC
Q 016350 306 NAIFYFSSSVFKSAGLS-SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSY 375 (391)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (391)
.....++...++.+..+ .|.+......+..+..+++|++.||+|.|+++.++.+...+..+++.+..+..
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~ 116 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVW 116 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555556666666 78899999999999999999999999999999999999999998888876533
No 268
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.29 E-value=0.0038 Score=57.06 Aligned_cols=84 Identities=24% Similarity=0.334 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHH-hhHHHHHH
Q 016350 53 VLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL-CALPMIIG 131 (391)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~i~ 131 (391)
++.+=+.++..+...+.+-|.++.+.+++|+++++. |.+++.--+...++.|++|+++||+-+||.+++ +++.....
T Consensus 13 l~~~k~f~~~~~~~~g~l~pll~vy~kQLGl~p~~~--Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a 90 (618)
T KOG3762|consen 13 LIVAKLFYLFFGARFGSLFPLLAVYFKQLGLNPAVV--GTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTA 90 (618)
T ss_pred hheeeeeeeeeeecccccchHHHHHHHHcCCCHHHh--hhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHH
Confidence 334444556666677778899999999999998888 899999999999999999999999987765555 56666666
Q ss_pred HHHHHhh
Q 016350 132 ASISATT 138 (391)
Q Consensus 132 ~~~~~~~ 138 (391)
.++..+.
T Consensus 91 ~fll~fv 97 (618)
T KOG3762|consen 91 TFLLVFV 97 (618)
T ss_pred HHheeec
Confidence 6666654
No 269
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.23 E-value=0.022 Score=47.31 Aligned_cols=102 Identities=7% Similarity=0.037 Sum_probs=55.1
Q ss_pred cccchHHHHHHHHHHHHHHHHHHhcccc---cc-ccchhHHHHHHHHHHHHHHHHHhhccccchhHHHHcCCHHHHHHHH
Q 016350 173 FVRGTYGAFIQIATCLGLMGSLLIGIPV---KE-IAGWWRICFWVSIVPAAILCLAMVFCAESPHWLYKKGRTAEAEAEF 248 (391)
Q Consensus 173 ~~r~~~~~~~~~~~~~g~~~~~~~~~~l---~~-~~~~w~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 248 (391)
|+|+....+...+.++|.++..+.--.- .+ ....|++++.+.+++.++-++...++ ++.-....+++++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if-Gk~fd~~~~~~k~------ 74 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF-GKNFDIYSPKEKQ------ 74 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccCccccc------
Confidence 5677777777788888876665442221 11 11239999988887776665555443 2210000000000
Q ss_pred HHHhCCCCchhHHHHhhhcccCCCCccccchhcccccchhHHHHHHHHHH
Q 016350 249 EKLLGGSHVKSSLAELSKLDRGDDGDIVKFEELLYGRHFRVVFIGSTLFA 298 (391)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (391)
+.++....++.+..+++|+|..|...+.+....
T Consensus 75 -----------------~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 75 -----------------EKENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred -----------------ccccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 011122234467888999998887666554443
No 270
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.21 E-value=0.016 Score=52.17 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHhhhchhhHHHhHHH---HHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHH
Q 016350 288 RVVFIGSTLFALQQLSGINAIFYFSSS---VFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVS 364 (391)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (391)
+.......+....+..--+.++.-.++ .++.+....|++.....+...+.+++.|++.||++|++++.+|..+-.++
T Consensus 32 ~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 32 TLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLA 111 (493)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHH
Confidence 333333444444444444444444433 44455556788999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCchHhHHhhhhcc
Q 016350 365 MAIQVAASSSYIPGSASLYLSVGGML 390 (391)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~ 390 (391)
.+...+.... +...++=++.|+|
T Consensus 112 v~~~~fs~~F---wq~~l~R~~vGiG 134 (493)
T KOG1330|consen 112 VFASGFSNHF---WQVLLCRGFVGIG 134 (493)
T ss_pred HHHHHHHHHH---HHHHHHHHHhccc
Confidence 8888887443 3344444454543
No 271
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.07 E-value=0.0016 Score=61.51 Aligned_cols=151 Identities=17% Similarity=0.225 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhhhcccchHH-HhHhhhccCcchhHHHHHHHHHHH-HHHHHHHHHHHhhhcch--hhHHHHHhhH
Q 016350 51 PHVLVATLSSFLFGYHLGVVNEPLE-SISLDLGFNGNTLAEGLVVSMCLG-GAFIGSTLSGWIADGVG--RRRAFQLCAL 126 (391)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~ 126 (391)
+.++...++.....+....+....| .+..+|+.+.+++ +++.++..+ +.++|.+++|++..|+. .|..+-...+
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A--~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v 382 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQA--SLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIV 382 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHH
Confidence 3455666666666666666677777 6677899988877 566655544 66899999999999865 3454444444
Q ss_pred HHHHHHHHHH---h--h---------h----------------------------------------hHHHHHHHHHHhh
Q 016350 127 PMIIGASISA---T--T---------R----------------------------------------NLIGMLLGRFVVG 152 (391)
Q Consensus 127 ~~~i~~~~~~---~--~---------~----------------------------------------~~~~l~~~r~l~G 152 (391)
...++.+... + + . ++..+++..++.-
T Consensus 383 ~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~ 462 (539)
T PF03137_consen 383 VSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILS 462 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHH
Confidence 4433333200 0 0 0 1122333333433
Q ss_pred hccchhhHHHHHHHhhcCCccccchHHHHHHHHH-HHHHHHHHHhccccccc
Q 016350 153 TGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIAT-CLGLMGSLLIGIPVKEI 203 (391)
Q Consensus 153 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~g~~~~~~~~~~l~~~ 203 (391)
+..+...+.....+-...|+++|+.++|+..... .+|.+-||++-|.+.+.
T Consensus 463 ~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 463 FFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------------------------
T ss_pred HHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 4444445555556667888999999999987544 44778888888877764
No 272
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.04 E-value=0.097 Score=39.20 Aligned_cols=46 Identities=22% Similarity=0.273 Sum_probs=32.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 016350 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (391)
.+.......++..++..+.+.+.|..+.+....+......++.+..
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 4556667788888999999999998887776665555544444433
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.02 E-value=0.062 Score=49.47 Aligned_cols=106 Identities=12% Similarity=0.053 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhh--HHHHH--hhHHHHHHHHHHHh---------hhhHHHHHHHHHHhhhccchh
Q 016350 92 LVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQL--CALPMIIGASISAT---------TRNLIGMLLGRFVVGTGMGLG 158 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~l~~--~~~~~~i~~~~~~~---------~~~~~~l~~~r~l~G~~~g~~ 158 (391)
.....|+++-.+|..+..+.. .-++| .+++. +=+++.-.-++|.. -++-+..++.-++.|+..|-.
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 556777788788777554421 11222 33322 22223333334432 245566777899999999999
Q ss_pred hHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcc
Q 016350 159 PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (391)
Q Consensus 159 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 198 (391)
......+..+..++++|..+..+...+..+|..+|..++-
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999888887753
No 274
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.92 E-value=0.016 Score=51.94 Aligned_cols=141 Identities=15% Similarity=0.084 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchh-hHHHHHhhHHHHHHHHHHHhh----hhHHHHHHHHHHhhhccchhhHHHHHH
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGR-RRAFQLCALPMIIGASISATT----RNLIGMLLGRFVVGTGMGLGPTVAALY 165 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~i~~~~~~~~----~~~~~l~~~r~l~G~~~g~~~~~~~~~ 165 (391)
|++.....++..+++...|.+.||... |.+.++......++....... .+.+.++....+.|.+....+|+..-+
T Consensus 304 G~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~El 383 (480)
T KOG2563|consen 304 GYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFEL 383 (480)
T ss_pred chhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceee
Confidence 888889999999999999999999764 555555555555553222222 223455666778888888888998888
Q ss_pred HhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc--hhHH-HHHHHHHHHHHHHHHhhccccc
Q 016350 166 VTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG--WWRI-CFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 166 i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~w~~-~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
-.|..-|..-+.-.|+.+....+=.++-..+-+...+..+ .|.. .-+......++.+++..+++|+
T Consensus 384 gvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 384 GVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred eeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 8887666555666666654444333333333333333322 1222 2223333344444444555544
No 275
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.50 E-value=0.18 Score=42.43 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=55.8
Q ss_pred hhchhhHHHhHHHHHhhcCCChhH---HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhccC
Q 016350 302 LSGINAIFYFSSSVFKSAGLSSGL---ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSSY 375 (391)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (391)
.+..+.++.|.++..+..+.+... +.....++..+| ++.|.+.|++|.+.++.++.+...++..++.......
T Consensus 15 ~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~ 90 (250)
T PF06813_consen 15 SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGR 90 (250)
T ss_pred cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 344567788888887776666544 444456666654 8889999999999999999999999999888765543
No 276
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.35 E-value=0.15 Score=44.79 Aligned_cols=51 Identities=14% Similarity=-0.027 Sum_probs=40.2
Q ss_pred hhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 016350 317 KSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAI 367 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 367 (391)
+....+.+.++........+...+.|.+.||+|||+.-+...++..++++.
T Consensus 65 g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~ 115 (354)
T PF05631_consen 65 GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT 115 (354)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence 333334666777777777888889999999999999988888888888764
No 277
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=95.26 E-value=0.021 Score=55.37 Aligned_cols=62 Identities=24% Similarity=0.154 Sum_probs=53.3
Q ss_pred hHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 311 FSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
.+++.++.+..+.|.+.+...++..++.++.+++.||.+||+++.++.++++++.+++++.+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alph 119 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPH 119 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChH
Confidence 33444566667788899999999999999999999999999999999999999999988764
No 278
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.14 E-value=0.033 Score=51.19 Aligned_cols=81 Identities=12% Similarity=0.160 Sum_probs=62.2
Q ss_pred HHHHH-HHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHH
Q 016350 143 GMLLG-RFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAIL 221 (391)
Q Consensus 143 ~l~~~-r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~ 221 (391)
.++++ -++.|++.-.......++-+|...|++++.+.+.+......+..++|++........| .|+.+.+.+...++.
T Consensus 389 ~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 389 LYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSG-PRPVWIILLCLLLVV 467 (488)
T ss_pred hheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcC-ccHHHHHHHHHHHHH
Confidence 33443 4466777666677778888999999999999999999999999999999888887777 677777655555444
Q ss_pred HHH
Q 016350 222 CLA 224 (391)
Q Consensus 222 ~~~ 224 (391)
...
T Consensus 468 ~~l 470 (488)
T KOG2325|consen 468 AAL 470 (488)
T ss_pred HHH
Confidence 433
No 279
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.81 E-value=0.32 Score=43.91 Aligned_cols=95 Identities=14% Similarity=0.005 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHh--hHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHh
Q 016350 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLC--ALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (391)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~--~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 167 (391)
.|.+-++..+..+++.+..|++..++.+..-+..+ .++.+...++++..+|.+..+++-++.+.......+....-++
T Consensus 287 NG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA 366 (412)
T PF01770_consen 287 NGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIA 366 (412)
T ss_pred chHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48889999999999999999998888886554444 3444555566788899999999888888777777777777777
Q ss_pred hcCCccccchHHHHHHH
Q 016350 168 EVSPPFVRGTYGAFIQI 184 (391)
Q Consensus 168 ~~~~~~~r~~~~~~~~~ 184 (391)
.....+.-+...|+...
T Consensus 367 ~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 367 KNLSEERYALVFGINTF 383 (412)
T ss_pred HhccccceeeeeeeHHH
Confidence 77777777777766554
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=94.76 E-value=0.01 Score=51.99 Aligned_cols=108 Identities=18% Similarity=0.202 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc-chhhHHHHHh--hHHHHHHHHHH----------HhhhhHHHHHHHHHHhhhccchh
Q 016350 92 LVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQLC--ALPMIIGASIS----------ATTRNLIGMLLGRFVVGTGMGLG 158 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~--~~~~~i~~~~~----------~~~~~~~~l~~~r~l~G~~~g~~ 158 (391)
.....|+++-.+|....++..=+ -.+|.+.+.+ =+++.-..++| .+.+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34567888888888887763211 1344444331 22222222222 12345566777889999999999
Q ss_pred hHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccc
Q 016350 159 PTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIP 199 (391)
Q Consensus 159 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 199 (391)
......+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888776543
No 281
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.61 E-value=0.19 Score=34.00 Aligned_cols=58 Identities=17% Similarity=0.094 Sum_probs=48.7
Q ss_pred hhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhcc
Q 016350 317 KSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAASSS 374 (391)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (391)
+.+..+.+++.+...++..+|.+...++.++.+++..+..+.+...+..+.+.+..+.
T Consensus 23 ~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~ 80 (85)
T PF06779_consen 23 GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSF 80 (85)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 3444456788999999999999999999999888888899999999999888877664
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.58 E-value=1.4 Score=39.63 Aligned_cols=106 Identities=16% Similarity=0.100 Sum_probs=74.6
Q ss_pred HHHHHH-HHHHHHHHHHHHHHhhhcchhhHHHHHhhH-HHHHHHHHH-------HhhhhHHHHHHHHHHhhhccchhhHH
Q 016350 91 GLVVSM-CLGGAFIGSTLSGWIADGVGRRRAFQLCAL-PMIIGASIS-------ATTRNLIGMLLGRFVVGTGMGLGPTV 161 (391)
Q Consensus 91 ~~~~s~-~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~-~~~i~~~~~-------~~~~~~~~l~~~r~l~G~~~g~~~~~ 161 (391)
-++... |++.-.+|.+.+.++.+. +||+..+..+. ...+-.+.. .+-++-+++++.-.+.|+..|=....
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYltsl 363 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTSL 363 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhhh
Confidence 355556 888888997777777665 44443333222 222222221 22456677888899999999999988
Q ss_pred HHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhc
Q 016350 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIG 197 (391)
Q Consensus 162 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 197 (391)
...+..+-.+++++..+..+.......|..+|..++
T Consensus 364 ~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 364 IMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred eehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 888999999999888888888888888888777765
No 283
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.74 E-value=0.18 Score=45.66 Aligned_cols=127 Identities=16% Similarity=-0.036 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCC
Q 016350 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 171 (391)
|-..++.+...+.+....++.||+|-|+.+..+...+.++..+.+..++.+.....|-..|+-.+......+..+++...
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~ 415 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAI 415 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHH
Confidence 44566666777999999999999998888888888788888899999999999999999886666555444443333221
Q ss_pred -----------------------ccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHH
Q 016350 172 -----------------------PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPA 218 (391)
Q Consensus 172 -----------------------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~ 218 (391)
..-+|...|+.+....+..++..+..|.+.+..|.=+.+-+..+..+
T Consensus 416 ~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s 485 (498)
T KOG0637|consen 416 LGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVA 485 (498)
T ss_pred hCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHH
Confidence 11235556666777777777666666666665553344444433333
No 284
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=91.21 E-value=0.57 Score=45.62 Aligned_cols=68 Identities=10% Similarity=0.094 Sum_probs=47.5
Q ss_pred hhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhh-hCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 305 INAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDK-LGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
...+..|+...++.....+......+....-+..+++|++.|+ +|+++++.++.++..++..++.+..
T Consensus 7 ~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a 75 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA 75 (654)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 4445556655545444444445555555556777889999996 6999999999999999998887643
No 285
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=88.32 E-value=2.8 Score=36.20 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=80.6
Q ss_pred HhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh-hHH-----HHHhhHHHHHHHHHHHhhhhHHHHHHHHHHh
Q 016350 78 SLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RRA-----FQLCALPMIIGASISATTRNLIGMLLGRFVV 151 (391)
Q Consensus 78 ~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~-----l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~ 151 (391)
.+.+..+.+. ++-|....|.+|-.+. +=+-|+=+ +.. +-.-..++.+...+..+.++++..++.-+.-
T Consensus 279 ~~g~sls~~s-qYRwyqvlYQlGVFiS-----RSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~E 352 (409)
T KOG3880|consen 279 SHGFSLSKDS-QYRWYQVLYQLGVFIS-----RSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFE 352 (409)
T ss_pred ccCCccchhh-cchhhheeeeeeEEEE-----eccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 3444444332 4468888887763221 11112211 211 2222344445555667788999888899999
Q ss_pred hhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc
Q 016350 152 GTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 152 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (391)
|+-.|..++...--+.+-.++++|-.+++....+-.+|..++.+++-.+-
T Consensus 353 GLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 353 GLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred hhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 99999999888887888788899999999999999999998888876543
No 286
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=88.26 E-value=0.14 Score=44.85 Aligned_cols=19 Identities=11% Similarity=0.260 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 016350 326 ANVFVGIANLLGSVVAMVL 344 (391)
Q Consensus 326 ~~~~~~~~~~~~~~~~g~l 344 (391)
.+..+.++..+|+.+.++.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHhcchhccee
Confidence 5667889999999988874
No 287
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.16 E-value=12 Score=31.89 Aligned_cols=138 Identities=14% Similarity=0.139 Sum_probs=82.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhh--HHHHHhhHHHHHHHHHH----Hhhh---hHHHHHHHHHHhhhcc
Q 016350 85 GNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRR--RAFQLCALPMIIGASIS----ATTR---NLIGMLLGRFVVGTGM 155 (391)
Q Consensus 85 ~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~i~~~~~----~~~~---~~~~l~~~r~l~G~~~ 155 (391)
+.++-.|.+.+.++++..+|+-+..++..|-..| ..+.+.....++...+. ..++ +...-+++..+.-.+.
T Consensus 279 ~e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cv 358 (454)
T KOG4332|consen 279 DEEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACV 358 (454)
T ss_pred cccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHH
Confidence 3344348899999999999999998888875554 34444443333332222 1222 1222244445555668
Q ss_pred chhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHH
Q 016350 156 GLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (391)
Q Consensus 156 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~ 223 (391)
|..+|....+=.+..|++.|...+.++..-..+=..++... -...+....-|..|-+......+..+
T Consensus 359 GlfwPSimkmRsqyIPEearstimNfFRvPLnifvClvLyn-lh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 359 GLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYN-LHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred hhcchHHHHHHHhhCCHHHHhhhhhheechhhHhhhhhhee-cccccCccccchhhhhhHHHHHHHHH
Confidence 88999999999999999999998888765544322222111 01111111147788776665555433
No 288
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=87.09 E-value=7 Score=30.24 Aligned_cols=44 Identities=16% Similarity=0.113 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 016350 326 ANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (391)
Q Consensus 326 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (391)
...+......++.++++.+.+++|.|+.++++.+...+-.....
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~ 85 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF 85 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 45556666778888999999999999999999888886655543
No 289
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=82.02 E-value=29 Score=29.10 Aligned_cols=36 Identities=8% Similarity=0.005 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 016350 331 GIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMA 366 (391)
Q Consensus 331 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (391)
.++..++-+-+.+++.|+..|.+.+++.+++.+..+
T Consensus 250 ~lCT~lAVigGk~lAskIS~rtVt~~ggi~Fi~Fgl 285 (294)
T KOG2881|consen 250 ALCTGLAVIGGKYLASKISVRTVTLIGGILFIIFGL 285 (294)
T ss_pred HHHHHHHHhhhHHHhhhheeEEEEEecchhHHHHHH
Confidence 344444444555678888888777776665555433
No 290
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=80.76 E-value=7.4 Score=33.25 Aligned_cols=50 Identities=22% Similarity=0.260 Sum_probs=36.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 323 SGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
.+.......+...++.++.|.+.||.|||+.+..+.....++.++..+..
T Consensus 41 ~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T COG0477 41 YGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP 90 (338)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc
Confidence 46677777888888889999999999999777766655444434444433
No 291
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=80.70 E-value=21 Score=34.05 Aligned_cols=72 Identities=10% Similarity=0.085 Sum_probs=31.0
Q ss_pred cchhcccccchhHHHHHHHHHHHHhhhchhhHHHhHHHHHhhcCCChhHHHH----HHHHHHHHHHHHHHHHHhhhC
Q 016350 277 KFEELLYGRHFRVVFIGSTLFALQQLSGINAIFYFSSSVFKSAGLSSGLANV----FVGIANLLGSVVAMVLMDKLG 349 (391)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~l~d~~~ 349 (391)
--.|++|.|....+ ++.++-.+.+..........+...--.++...|.+.. .+.+.+.++..+++++...++
T Consensus 250 vhgDVFR~P~~~~l-ls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~ 325 (521)
T PF02990_consen 250 VHGDVFRPPKHPML-LSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFG 325 (521)
T ss_pred hhHHHhcCcCCchH-HHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcC
Confidence 34567777765433 3333333333333333333332222223333344333 344444555555555555454
No 292
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=77.89 E-value=37 Score=27.74 Aligned_cols=20 Identities=25% Similarity=0.383 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 016350 92 LVVSMCLGGAFIGSTLSGWI 111 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l 111 (391)
+.......++.+|....+.+
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i 69 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLI 69 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444556666777777777
No 293
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=76.72 E-value=35 Score=28.94 Aligned_cols=100 Identities=11% Similarity=0.076 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc-chhhHHHH----HhhHHHHHHHHHHHh-h----hhHHHHHHHHHHhhhccchhhHH
Q 016350 92 LVVSMCLGGAFIGSTLSGWIADG-VGRRRAFQ----LCALPMIIGASISAT-T----RNLIGMLLGRFVVGTGMGLGPTV 161 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~----~~~~~~~i~~~~~~~-~----~~~~~l~~~r~l~G~~~g~~~~~ 161 (391)
...-++..|..+|.+..|++... +-||+.+. .+.++..+..+..+. . .++..+++.-++.|++.=+.++.
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 44555666777777888887764 44555433 233444443333211 1 13566777888888765444443
Q ss_pred HHHHHhhcCCccccchHHHHHHHHHHHHHHH
Q 016350 162 AALYVTEVSPPFVRGTYGAFIQIATCLGLMG 192 (391)
Q Consensus 162 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 192 (391)
.. .+-+-++..++.+..-+++..+++|.+.
T Consensus 225 iL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 225 IL-NLPHEYKGYNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred Hh-cChhhhcCCCcceehhHHHHHHHHHHHH
Confidence 32 3333344444444555556666666544
No 294
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=75.68 E-value=0.31 Score=40.59 Aligned_cols=63 Identities=14% Similarity=0.203 Sum_probs=37.9
Q ss_pred HHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHh---------hhcchhhHHH
Q 016350 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWI---------ADGVGRRRAF 121 (391)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l---------~dr~Grr~~l 121 (391)
..+.+++....+.--..+-.+.++.+.++++. ..++-+..+.-++..++.|.. .||+|||+..
T Consensus 23 GvGHmlNDitAScWFTYlllfltqiglsp~~~--AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 23 GVGHMLNDITASCWFTYLLLFLTQIGLSPSSR--AMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred chhHHHhhHHHHHHHHHHHHHHHHhcCCcchh--HHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 34444444444433334444556667777665 466666666777777777643 4799999754
No 295
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=74.88 E-value=77 Score=29.98 Aligned_cols=70 Identities=13% Similarity=0.157 Sum_probs=48.3
Q ss_pred HHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHH
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAA 219 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~ 219 (391)
+..|+.........-..+.+.+| ++++...+|-++...++-.++-.++++.+....| |+..-.+.-+..+
T Consensus 290 i~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~G-W~~~AlitPiv~l 360 (491)
T PF03219_consen 290 IAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFG-WRTAALITPIVIL 360 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHhHHHHH
Confidence 44455555555566666777776 4567778888877777777777788888888888 8887666433333
No 296
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=73.69 E-value=67 Score=28.72 Aligned_cols=95 Identities=19% Similarity=0.176 Sum_probs=59.9
Q ss_pred hHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHH-----HHHHhh----hhHHH
Q 016350 73 PLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGA-----SISATT----RNLIG 143 (391)
Q Consensus 73 ~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~-----~~~~~~----~~~~~ 143 (391)
.+..++..+.- .+-.+.+.+.+.|..+..+|+...-++.|.--.-+.+..-.++..++. +-..|+ ++-+.
T Consensus 29 al~tLatyLlG-~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~V 107 (508)
T COG4262 29 ALGTLATYLLG-GGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLV 107 (508)
T ss_pred HHHHHHHHhcC-CceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHH
Confidence 44455555432 233445899999999999999998888875333322222222222221 111233 35567
Q ss_pred HHHHHHHhhhccchhhHHHHHHHhh
Q 016350 144 MLLGRFVVGTGMGLGPTVAALYVTE 168 (391)
Q Consensus 144 l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (391)
+.+.-++.|.-.|.-.|..+.++..
T Consensus 108 ly~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 108 LYALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHH
Confidence 7788899999899999988888766
No 297
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=72.94 E-value=14 Score=34.55 Aligned_cols=48 Identities=15% Similarity=0.225 Sum_probs=38.3
Q ss_pred HHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHH
Q 016350 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLM 191 (391)
Q Consensus 144 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 191 (391)
+++.-++.-+..-..++...++=+.+.+|..-|+.|.+.+...++|.-
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGt 455 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGT 455 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCC
Confidence 334566777777777888888999999999999999999988877644
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.12 E-value=23 Score=25.08 Aligned_cols=38 Identities=18% Similarity=0.178 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHhhh-CchHHHHHHHHHHHHHHHHH
Q 016350 331 GIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQ 368 (391)
Q Consensus 331 ~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~ 368 (391)
.+.+++-....||+.||+ |-+++..+.+.+...+.-++
T Consensus 52 fIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 52 FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 344555556678999986 55666555555554444433
No 299
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=71.32 E-value=92 Score=29.31 Aligned_cols=72 Identities=13% Similarity=0.086 Sum_probs=51.9
Q ss_pred HHHhhhccchhhHHHHHHHhhcCC-ccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHH
Q 016350 148 RFVVGTGMGLGPTVAALYVTEVSP-PFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAI 220 (391)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~ 220 (391)
-++.|+.........-..+.|.+| +++|...+|-+....++..++..++++.+.+..| |...-.+.-+..++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G-w~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG-WLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHH
Confidence 344556566666666677788887 5678889999888888888777777788888888 88776665444444
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.34 E-value=23 Score=25.08 Aligned_cols=28 Identities=18% Similarity=0.151 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-hhhHHHH
Q 016350 95 SMCLGGAFIGSTLSGWIADGV-GRRRAFQ 122 (391)
Q Consensus 95 s~~~~~~~i~~~~~g~l~dr~-Grr~~l~ 122 (391)
+.=+++..+.....||+.||| |-++..+
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwgl 77 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGL 77 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 333445555566778999985 4444433
No 301
>COG3619 Predicted membrane protein [Function unknown]
Probab=70.25 E-value=62 Score=26.85 Aligned_cols=119 Identities=13% Similarity=0.103 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcchh-hH-HH-HHhhHHHHHHHHHHHh----hhhHHHHHHHHH----------
Q 016350 87 TLAEGLVVSMCLGGAFIGSTLSGWIADGVGR-RR-AF-QLCALPMIIGASISAT----TRNLIGMLLGRF---------- 149 (391)
Q Consensus 87 ~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~-~l-~~~~~~~~i~~~~~~~----~~~~~~l~~~r~---------- 149 (391)
+...........+.+.+|......+..|..| .. .+ ..+.++..+.....++ +++....+..-+
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~ 133 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFR 133 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 4433566777777777886666666665554 12 22 2222322332333333 234433333333
Q ss_pred -HhhhccchhhHHHH-----HHHhhcCCccccc-hHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 150 -VVGTGMGLGPTVAA-----LYVTEVSPPFVRG-TYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 150 -l~G~~~g~~~~~~~-----~~i~~~~~~~~r~-~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
+.|...+..+.+.. .-+.+++.+|+.. ..-........++.++|.+.++.+....+
T Consensus 134 k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 134 KVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444333221 1234555443222 22333344455566666666666665554
No 302
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=69.20 E-value=36 Score=30.40 Aligned_cols=110 Identities=15% Similarity=0.054 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHH--hhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHh
Q 016350 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQL--CALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVT 167 (391)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~--~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 167 (391)
.|-.-++..+..+++.+..|.+--++.|..-+++ +....+...++++-+++.+...++-++.+.-.....+++..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 3666677777888999999999988887744444 44444444556677788888888877777777777777777788
Q ss_pred hcCCccccchHHHHHHHHHHHHHHHHHHhcccccc
Q 016350 168 EVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKE 202 (391)
Q Consensus 168 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 202 (391)
+....+.-|...|+.... +.++=.++...+.+
T Consensus 353 ~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 877778788888776543 33444444444444
No 303
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=67.53 E-value=1.1e+02 Score=28.53 Aligned_cols=125 Identities=19% Similarity=0.191 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHH
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIG 131 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~ 131 (391)
..+.+.+-..+..+...+..|.+ +..++|++.++. ..+.+.-.+...++.++--....+.|-|-....+.....++
T Consensus 17 ~~~~lglQH~lamfg~~V~VPli--vg~a~~l~~~~~--~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~ 92 (451)
T COG2233 17 KLLLLGLQHLLAMFGATVLVPLL--VGLALGLSAEDT--AYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVA 92 (451)
T ss_pred HHHHHHHHHHHHHHhcchHhhHH--hccCCCCCHHHH--HHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHH
Confidence 34566666777777666555554 566788887777 68888888888888888776444566665556666555565
Q ss_pred HHHHHhhh---hHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHH
Q 016350 132 ASISATTR---NLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGA 180 (391)
Q Consensus 132 ~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~ 180 (391)
.++....+ .....+.+-+..|+..-...+.....+...+||---|...-
T Consensus 93 p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~ 144 (451)
T COG2233 93 PMIAIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVL 144 (451)
T ss_pred HHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEee
Confidence 55544432 35666666666666544444333227788888877665443
No 304
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=64.97 E-value=87 Score=26.58 Aligned_cols=23 Identities=4% Similarity=0.109 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcccc
Q 016350 208 RICFWVSIVPAAILCLAMVFCAE 230 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~~~~~~~e 230 (391)
.+.=++..+..++....+.+++.
T Consensus 115 ~~Ln~~G~~l~~~~~~~f~fik~ 137 (254)
T PF07857_consen 115 PWLNYIGVALVLVSGIIFSFIKS 137 (254)
T ss_pred hHHHHHHHHHHHHHHHheeeecC
Confidence 44444455555555555544433
No 305
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=64.45 E-value=19 Score=25.52 Aligned_cols=51 Identities=18% Similarity=0.007 Sum_probs=42.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 321 LSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
.+.|-.+..++...++.+++.++..|+..+.+.=.++..++.++..++.+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456788999999999999999999999988777778888888777765543
No 306
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=64.38 E-value=1.1e+02 Score=27.74 Aligned_cols=149 Identities=13% Similarity=0.045 Sum_probs=75.4
Q ss_pred HHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHH----HHHHHHHHHHHhhhcchhhHHHHHhhHHHHH
Q 016350 55 VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLG----GAFIGSTLSGWIADGVGRRRAFQLCALPMII 130 (391)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~----~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i 130 (391)
.+.+++++.....-+-......+..+++-+ .. .+.++|.+ ...+..++.|...|+..|+|++-..+.+.-+
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gn--sl---~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNl 105 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGN--SL---LLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNL 105 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCc--ee---hhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccH
Confidence 445555555544444444444455555422 11 23334433 2346667788889999999998777665544
Q ss_pred HHHHHH------hh------hhHHHHHHHHHHhhhccchh--hHHHHHH--HhhcC----CccccchHH---HHHHHHHH
Q 016350 131 GASISA------TT------RNLIGMLLGRFVVGTGMGLG--PTVAALY--VTEVS----PPFVRGTYG---AFIQIATC 187 (391)
Q Consensus 131 ~~~~~~------~~------~~~~~l~~~r~l~G~~~g~~--~~~~~~~--i~~~~----~~~~r~~~~---~~~~~~~~ 187 (391)
+-+.++ +. .++..+..+-++.-.-++.. .....++ -.||. ..+.+.... +..-..-.
T Consensus 106 Sv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq 185 (503)
T KOG2601|consen 106 SVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQ 185 (503)
T ss_pred HHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhh
Confidence 433332 11 35555555544443222211 1111111 12332 233344433 33333334
Q ss_pred HHHHHHHHhccccccccchhHH
Q 016350 188 LGLMGSLLIGIPVKEIAGWWRI 209 (391)
Q Consensus 188 ~g~~~~~~~~~~l~~~~~~w~~ 209 (391)
.-..+.|.+.|.+.+..+ -|.
T Consensus 186 ~tn~Lapv~tg~Iitfvs-l~~ 206 (503)
T KOG2601|consen 186 STNLLAPVITGLIITFVS-LRA 206 (503)
T ss_pred hhhchhhhhhcccceeec-hhh
Confidence 456788888888887666 454
No 307
>PRK02237 hypothetical protein; Provisional
Probab=61.62 E-value=34 Score=24.34 Aligned_cols=50 Identities=18% Similarity=0.079 Sum_probs=41.5
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 016350 322 SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAA 371 (391)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (391)
+.|-.+..++...++.+++.++..|+..+-+.=.++..++.++..++.+.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 36788999999999999999999999987777777888888877666543
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=59.08 E-value=85 Score=30.42 Aligned_cols=77 Identities=12% Similarity=0.098 Sum_probs=53.8
Q ss_pred HHHHHhhhchhhHHHhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh-CchHHHHHHHHHHHHHHHHHHHHh
Q 016350 296 LFALQQLSGINAIFYFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKL-GRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
+-....+.....+..|+...++..+..+...............+++++++|-+ ||.+++.++..+..++.+++.+..
T Consensus 48 ~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a 125 (571)
T KOG1237|consen 48 LERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSA 125 (571)
T ss_pred HHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444445667777777777765555566666666667778999999974 788888888888888876666543
No 309
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=58.05 E-value=1.4e+02 Score=26.65 Aligned_cols=95 Identities=11% Similarity=0.016 Sum_probs=51.4
Q ss_pred HHHHHHHHhhhcchhhHHHHHhhHHHH---HHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCcccc-chH
Q 016350 103 IGSTLSGWIADGVGRRRAFQLCALPMI---IGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVR-GTY 178 (391)
Q Consensus 103 i~~~~~g~l~dr~Grr~~l~~~~~~~~---i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r-~~~ 178 (391)
+-.++.+++.+.+|.-+.+..+.++.. --.+....++|......+..+.|.-.|....-.....-...++|+| -.+
T Consensus 61 ~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVaLgii~k~D~~y~a 140 (354)
T PF04346_consen 61 FLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVALGIIEKEDHKYLA 140 (354)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhhhhhcChhhhHHHH
Confidence 445667778888999998887666532 2244556677777777776666655555432222222223333333 333
Q ss_pred HHHHH--HHHHHHHHHHHHhc
Q 016350 179 GAFIQ--IATCLGLMGSLLIG 197 (391)
Q Consensus 179 ~~~~~--~~~~~g~~~~~~~~ 197 (391)
.|+.. ....+|.+++.++.
T Consensus 141 ~Gil~GiitIPiG~~vggl~~ 161 (354)
T PF04346_consen 141 KGILAGIITIPIGCFVGGLIA 161 (354)
T ss_pred HHHHHHHhhhCHHHHHHHHHH
Confidence 34332 22334555555544
No 310
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=57.47 E-value=57 Score=24.98 Aligned_cols=41 Identities=27% Similarity=0.384 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHH
Q 016350 94 VSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASI 134 (391)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~ 134 (391)
+.-|.+++.+...+.|++.+|..+++..........++.+.
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~i 99 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLI 99 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 45678888999999999999988764333333333333333
No 311
>COG4769 Predicted membrane protein [Function unknown]
Probab=57.08 E-value=29 Score=26.76 Aligned_cols=54 Identities=24% Similarity=0.114 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhcc
Q 016350 96 MCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGM 155 (391)
Q Consensus 96 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~ 155 (391)
++....++.+...-++..++|+|.+-.+|.. ..-++.+|..++++.+++.|--.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~~~~ 134 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVFTTS 134 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHhcch
Confidence 3445556667777788899999987555443 34468899999999999987533
No 312
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=56.12 E-value=8 Score=33.61 Aligned_cols=131 Identities=12% Similarity=-0.014 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCC
Q 016350 92 LVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (391)
Q Consensus 92 ~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 171 (391)
.+.-+-.+...+..+.+....||+---.=..+..++.+.+.++.+++++.++-+.+-.+..++.|........+. ..++
T Consensus 66 ~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~ls-s~Y~ 144 (409)
T KOG3880|consen 66 AVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALS-SRYP 144 (409)
T ss_pred hhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhh-ccCC
Confidence 333344455566677777888885433333455666777788889999999999998888888888876655543 3343
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHhcccccc--ccchhHHHHHHHHHHHHHHHHHhhcc
Q 016350 172 PFVRGTYGAFIQIATCLGLMGSLLIGIPVKE--IAGWWRICFWVSIVPAAILCLAMVFC 228 (391)
Q Consensus 172 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~~w~~~f~~~~~~~~~~~~~~~~~ 228 (391)
+. ..+-++.+.+.+.++|..--..+.+ ... -|...++...+.++.+...+++
T Consensus 145 ~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~s-pk~Tlli~l~lP~lfa~~yf~l 198 (409)
T KOG3880|consen 145 SI----VIAGWSSGTGGAGLIGASSYAFLTSWANLS-PKSTLLIMLFLPALFAFAYFFL 198 (409)
T ss_pred Cc----eeccccCCCCcchhhhhhHHHHHhhhcCCC-hhhHHHHHHHHHHHHHHHHHhe
Confidence 32 2233333333333444333223333 112 3555555444444444444443
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=54.16 E-value=86 Score=24.14 Aligned_cols=51 Identities=14% Similarity=0.109 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHH
Q 016350 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMG 192 (391)
Q Consensus 139 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 192 (391)
+++..+++.-.+.|+|.- .+.|.+++--.++++.|..+|+-.+--+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 445555555555554322 233445555566777899999988877776553
No 314
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=51.67 E-value=62 Score=25.82 Aligned_cols=24 Identities=25% Similarity=0.339 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchh
Q 016350 94 VSMCLGGAFIGSTLSGWIADGVGR 117 (391)
Q Consensus 94 ~s~~~~~~~i~~~~~g~l~dr~Gr 117 (391)
+.-|.+++.++..+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456788999999999999999875
No 315
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=50.72 E-value=1.2e+02 Score=28.04 Aligned_cols=16 Identities=6% Similarity=0.123 Sum_probs=8.9
Q ss_pred chhcccccchhHHHHH
Q 016350 278 FEELLYGRHFRVVFIG 293 (391)
Q Consensus 278 ~~~~~~~~~~~~~~~~ 293 (391)
-.+++|.+..+.++..
T Consensus 282 HgDVFR~p~~~~Lfsa 297 (593)
T KOG1277|consen 282 HGDVFRFPSHPLLFSA 297 (593)
T ss_pred ecccccCCCccHHHHH
Confidence 3456776666554443
No 316
>COG1288 Predicted membrane protein [Function unknown]
Probab=48.64 E-value=2.3e+02 Score=26.30 Aligned_cols=73 Identities=11% Similarity=0.037 Sum_probs=37.9
Q ss_pred HHhhHHHHHHHHHHHhhhhH--HHHHHHHHHhhhc------cchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHH
Q 016350 122 QLCALPMIIGASISATTRNL--IGMLLGRFVVGTG------MGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGS 193 (391)
Q Consensus 122 ~~~~~~~~i~~~~~~~~~~~--~~l~~~r~l~G~~------~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 193 (391)
+.-.++....+++..+++.. ...++...+.++. .+...-...+=++|...- .|..+..-++.+.++-.++.
T Consensus 358 i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~VpS~SG~A~ltMPImAPLaD~vgv-~RqvvV~Afq~g~G~~n~I~ 436 (481)
T COG1288 358 ILDTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVPSGSGLAVLTMPIMAPLADLVGV-PRQVVVLAFQLGDGFSNIIA 436 (481)
T ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEeCCCchhHhhchhhhhhHHhcCC-CHHHhhhhhhhcchhhheec
Confidence 33445555556666555543 2334445555543 222222223335676643 36777777777766666555
Q ss_pred HH
Q 016350 194 LL 195 (391)
Q Consensus 194 ~~ 195 (391)
|-
T Consensus 437 PT 438 (481)
T COG1288 437 PT 438 (481)
T ss_pred Cc
Confidence 54
No 317
>PTZ00101 rhomboid-1 protease; Provisional
Probab=47.81 E-value=1.8e+02 Score=25.06 Aligned_cols=38 Identities=18% Similarity=0.088 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhhh-cchhhHHHHHhhHHHHHHHHHHH
Q 016350 99 GGAFIGSTLSGWIAD-GVGRRRAFQLCALPMIIGASISA 136 (391)
Q Consensus 99 ~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~i~~~~~~ 136 (391)
+.........|...+ .+|+++..++=.+....++++.+
T Consensus 119 l~Nm~~l~~~G~~lE~~~G~~r~~ilYl~sGi~G~l~s~ 157 (278)
T PTZ00101 119 FFNVFFQLRMGFTLEKNYGIVKIIILYFLTGIYGNILSS 157 (278)
T ss_pred HHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHHH
Confidence 344455566666555 49999987665555555555543
No 318
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=47.69 E-value=66 Score=19.91 Aligned_cols=43 Identities=7% Similarity=0.056 Sum_probs=24.2
Q ss_pred HHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhccccc
Q 016350 188 LGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAES 231 (391)
Q Consensus 188 ~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e~ 231 (391)
+|.+++.+.+......++ +...-.+..+.+++..++....|++
T Consensus 13 l~~vvgyI~ssL~~~~~n-~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 13 LGEVVGYIGSSLTGVTYN-FTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 455555555444444444 5666666666666666655555544
No 319
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=46.78 E-value=47 Score=23.56 Aligned_cols=47 Identities=30% Similarity=0.359 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 137 (391)
|=+.++|.-.+.+.++.+++..|+.-+.+.=.+|..++.++..+.-+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEe
Confidence 67788888888999999999999988887777777777666655433
No 320
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=46.45 E-value=85 Score=20.81 Aligned_cols=10 Identities=10% Similarity=-0.081 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 016350 141 LIGMLLGRFV 150 (391)
Q Consensus 141 ~~~l~~~r~l 150 (391)
+..+.++-++
T Consensus 38 ~~~~~~g~~~ 47 (76)
T PF06645_consen 38 FYIYGAGVVL 47 (76)
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 321
>PRK10263 DNA translocase FtsK; Provisional
Probab=41.81 E-value=1.8e+02 Score=31.17 Aligned_cols=19 Identities=21% Similarity=0.052 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHhhhcch
Q 016350 98 LGGAFIGSTLSGWIADGVG 116 (391)
Q Consensus 98 ~~~~~i~~~~~g~l~dr~G 116 (391)
+++..+|..+...+..-+|
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 3344444444444444455
No 322
>PRK02237 hypothetical protein; Provisional
Probab=41.78 E-value=82 Score=22.47 Aligned_cols=47 Identities=28% Similarity=0.287 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT 137 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~ 137 (391)
|=+.++|.-.+.+.++.+++..|+.-+-+.=.+|..++.+|..+.-+
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 67788888889999999999999988777767777766666654433
No 323
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=41.55 E-value=22 Score=35.12 Aligned_cols=63 Identities=17% Similarity=0.111 Sum_probs=51.6
Q ss_pred HhHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 016350 310 YFSSSVFKSAGLSSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVAAS 372 (391)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (391)
...++.++......|.+....-++..+...+..+...|..|-+++-++.++++++.++..+.+
T Consensus 121 ttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPH 183 (735)
T KOG3626|consen 121 TTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPH 183 (735)
T ss_pred hhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChH
Confidence 344555566666678888888889999999999999999998999999999999999988664
No 324
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=41.25 E-value=34 Score=30.64 Aligned_cols=44 Identities=9% Similarity=0.234 Sum_probs=24.9
Q ss_pred CCcchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchh
Q 016350 44 PSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTL 88 (391)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 88 (391)
+.+.+ |..+..+....++..+....+.-.+....++++++.+-.
T Consensus 284 p~is~-~ss~~~L~~~T~~vsllaeyLV~~Id~~~ds~~ls~~Fi 327 (441)
T KOG1397|consen 284 PNISR-WSSIIWLLIMTLLVSLLAEYLVDTIDDVSDSWGLSVKFI 327 (441)
T ss_pred CcchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhh
Confidence 34444 334444444445555544455556777888888876554
No 325
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=40.77 E-value=1.3e+02 Score=21.45 Aligned_cols=32 Identities=13% Similarity=0.026 Sum_probs=13.4
Q ss_pred HHHHhhhCchHHHHHHHHHHHHHHHHHHHHhc
Q 016350 342 MVLMDKLGRKALLQWSFFSMAVSMAIQVAASS 373 (391)
Q Consensus 342 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (391)
-+.+|.+.|+...+...+...+++.++...-.
T Consensus 21 lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk 52 (106)
T COG2076 21 LKYSDGFTRLWPSILTIVGYGLSFYLLSLALK 52 (106)
T ss_pred HHHHhcccccchHHHHHHHHHHHHHHHHHHHh
Confidence 33444444444444444444444444444333
No 326
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=39.36 E-value=2.6e+02 Score=24.39 Aligned_cols=30 Identities=10% Similarity=-0.038 Sum_probs=15.2
Q ss_pred HHHHHHHHHhhhccchhhHH-HHHHHhhcCC
Q 016350 142 IGMLLGRFVVGTGMGLGPTV-AALYVTEVSP 171 (391)
Q Consensus 142 ~~l~~~r~l~G~~~g~~~~~-~~~~i~~~~~ 171 (391)
..-.+--.+++++.|...-+ ..-++.|...
T Consensus 261 ~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~ 291 (317)
T PF02535_consen 261 SSDIVSGILLAFAAGTFLYVAFVELLPEEFH 291 (317)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444556677766665433 3334444443
No 327
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=39.00 E-value=19 Score=29.61 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=34.9
Q ss_pred HHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhcc
Q 016350 149 FVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGI 198 (391)
Q Consensus 149 ~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~ 198 (391)
.-.|.|.|....++..-+.+.+| +......++..+++.+..+.|..+.-
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~i 227 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSI 227 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44688888888888888888886 55666777777777666666655443
No 328
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=38.48 E-value=2.2e+02 Score=26.76 Aligned_cols=111 Identities=11% Similarity=0.139 Sum_probs=50.5
Q ss_pred hhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhccchhhHHHHHHHhhcCCcccc----chHHHHHHHHHHHHHH
Q 016350 116 GRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSPPFVR----GTYGAFIQIATCLGLM 191 (391)
Q Consensus 116 Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r----~~~~~~~~~~~~~g~~ 191 (391)
|.|+.+...++.+.++.+.-++.++|....+.-.+.-...- ..........++..+ ....+.......++..
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl~~~l~~~~er----~~~r~~~~~~~~~~~~~~l~~~~~~~~t~~~~~y~ 414 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFVQSALMIAGSR----VIYRWQQAIPPSMALARNLLVFINFLYTVLVLNYS 414 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH----HHHHhhcccccccchhhHHHHHHHHHHHHHHHHHH
Confidence 34455555566777888888888887665433222211111 011122222211111 1223333333344444
Q ss_pred HHHHhccccccccchhHHHHHHHHHHHHHHHHHhhcccc
Q 016350 192 GSLLIGIPVKEIAGWWRICFWVSIVPAAILCLAMVFCAE 230 (391)
Q Consensus 192 ~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~~~~~~~e 230 (391)
..+....-+.+...-|+.++++.-+..++..+...+++.
T Consensus 415 ~~~F~lls~~~~~~~~~svyf~~hi~~~~~~~~~~~~~~ 453 (465)
T PLN02332 415 CVGFMLLSLDETLAAYGSVYYIGTIIPVVLILLGSVVKP 453 (465)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 444443333332233777777766665555444444443
No 329
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=36.72 E-value=1.4e+02 Score=20.41 Aligned_cols=42 Identities=21% Similarity=0.211 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhhhcchh-------hHHHHHhhHHHHHHHHHHHhhhhH
Q 016350 100 GAFIGSTLSGWIADGVGR-------RRAFQLCALPMIIGASISATTRNL 141 (391)
Q Consensus 100 ~~~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~i~~~~~~~~~~~ 141 (391)
+.....+.++++.+|.-+ ++.+..+.++...+.++++...+.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 334556677777777665 677788888888888887776553
No 330
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=36.09 E-value=1.6e+02 Score=20.86 Aligned_cols=13 Identities=15% Similarity=0.074 Sum_probs=5.2
Q ss_pred HHHHHHHhhhCch
Q 016350 339 VVAMVLMDKLGRK 351 (391)
Q Consensus 339 ~~~g~l~d~~~~~ 351 (391)
+++-|+-++++-.
T Consensus 61 ~lG~WLD~~~~t~ 73 (100)
T TIGR02230 61 AVGIWLDRHYPSP 73 (100)
T ss_pred HHHHHHHhhcCCC
Confidence 3333333345443
No 331
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=36.06 E-value=3.6e+02 Score=24.97 Aligned_cols=121 Identities=18% Similarity=0.163 Sum_probs=61.7
Q ss_pred HHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHH
Q 016350 54 LVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGAS 133 (391)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~ 133 (391)
+.+.+-+.+..+...+..|.+ +.... +++++. ..+.+.-.+...++.++-+...++. -|-....+.....++..
T Consensus 8 ~~lglQh~l~~~~~~i~~p~i--v~~~~-l~~~~~--~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~ 81 (415)
T TIGR00801 8 LVLGLQHLLAMFGGTVLVPLL--VGLAP-LSAEQT--QYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPM 81 (415)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--Hhccc-CCHHHH--HHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHH
Confidence 344444444444444433333 33344 555555 6778888888889999988877654 22222222221222222
Q ss_pred H-HHhhhhHHHHHHHHHHhhhccchhhHH----HHHHHhhcCCccccchHHH
Q 016350 134 I-SATTRNLIGMLLGRFVVGTGMGLGPTV----AALYVTEVSPPFVRGTYGA 180 (391)
Q Consensus 134 ~-~~~~~~~~~l~~~r~l~G~~~g~~~~~----~~~~i~~~~~~~~r~~~~~ 180 (391)
. .....++.....+-++.|+........ ....+.+.+|+.-.+....
T Consensus 82 ~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~ 133 (415)
T TIGR00801 82 IAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVM 133 (415)
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHH
Confidence 2 222234444444555555544333321 2235578888887765443
No 332
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=35.87 E-value=1.6e+02 Score=21.05 Aligned_cols=24 Identities=21% Similarity=0.174 Sum_probs=13.3
Q ss_pred HHHhhhccchhhHHHHHHHhhcCC
Q 016350 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (391)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~ 171 (391)
|.+.+.|..+.+++..++..|...
T Consensus 56 ~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 56 YAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHhhHccccccHHHHHHHHHH
Confidence 334444544555566666777664
No 333
>PF08570 DUF1761: Protein of unknown function (DUF1761); InterPro: IPR013879 This entry shows conserved fungal proteins with unknown function.
Probab=35.19 E-value=1.8e+02 Score=21.36 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=18.4
Q ss_pred HHHHHHHHHhhhhhhcccc-hHHHhHhhhccCcchh
Q 016350 54 LVATLSSFLFGYHLGVVNE-PLESISLDLGFNGNTL 88 (391)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~ 88 (391)
++..+..+..+.... +| .-....++.|.++++.
T Consensus 5 lvaa~~~~~~G~lWY--~plFg~~W~~~~g~~~~~~ 38 (126)
T PF08570_consen 5 LVAAIAAFVLGFLWY--GPLFGKAWMRAMGITPEDA 38 (126)
T ss_pred HHHHHHHHHHHHHHH--hHHHHHHHHHHcCCCcccc
Confidence 333444444444443 44 5667788888776654
No 334
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=35.08 E-value=1.1e+02 Score=27.92 Aligned_cols=94 Identities=18% Similarity=0.122 Sum_probs=44.8
Q ss_pred hccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHh------hhhHHHHHHHHHHhhhc
Q 016350 81 LGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISAT------TRNLIGMLLGRFVVGTG 154 (391)
Q Consensus 81 ~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~------~~~~~~l~~~r~l~G~~ 154 (391)
+|. ..+. ..+.+.-.+...++.++-+. +.|.|..+.-+.....+....... ..++.....+-++.|+-
T Consensus 29 ~g~-~~~~--~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi~ 102 (389)
T PF00860_consen 29 FGL-DADT--AALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGIL 102 (389)
T ss_dssp -------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHHH
T ss_pred ccc-cchh--hHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHHH
Confidence 465 4444 35566667777888888887 788888888877666665333332 23455555556666654
Q ss_pred cchhhHHHH-HHHhhcCCccccchHHH
Q 016350 155 MGLGPTVAA-LYVTEVSPPFVRGTYGA 180 (391)
Q Consensus 155 ~g~~~~~~~-~~i~~~~~~~~r~~~~~ 180 (391)
.-....... ..+.+++|+.-++....
T Consensus 103 ~~~l~~~g~~~~l~~~~pp~v~g~v~~ 129 (389)
T PF00860_consen 103 FILLGLTGLRKRLRRLFPPVVKGAVVL 129 (389)
T ss_dssp HHHHHTT-SH-HHHHH--HHHHHHHHH
T ss_pred HHHHHHhchHHHHHHHhChhheEeeEe
Confidence 433332222 36778888776654443
No 335
>PRK11469 hypothetical protein; Provisional
Probab=35.03 E-value=2.1e+02 Score=22.95 Aligned_cols=89 Identities=17% Similarity=0.217 Sum_probs=0.0
Q ss_pred CCcccCCCCCCcchhhHHHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 016350 35 NGTEVENTNPSWKLSFPHVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG 114 (391)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr 114 (391)
+++++++++...+..++..+.+.++.-++.+....-...... +.-.... .+.-...+....|...+.++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~LaiAtSiDAlavGi~~~~~g~-----~~~~~~~---~ig~~s~~~~~~G~~lG~~~g~~ 161 (188)
T PRK11469 90 RGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQV-----NIIATAL---AIGCATLIMSTLGMMVGRFIGSI 161 (188)
T ss_pred hcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred chhhHHHHHhhHHHHHH
Q 016350 115 VGRRRAFQLCALPMIIG 131 (391)
Q Consensus 115 ~Grr~~l~~~~~~~~i~ 131 (391)
+|+|.-++.|.++..++
T Consensus 162 ~g~~a~~lgG~iLI~iG 178 (188)
T PRK11469 162 IGKKAEILGGLVLIGIG 178 (188)
T ss_pred HHHHHHHHHHHHHHHHH
No 336
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=34.72 E-value=1.5e+02 Score=22.39 Aligned_cols=27 Identities=15% Similarity=0.195 Sum_probs=20.2
Q ss_pred HHhhcCCccccchHHHHHHHHHHHHHH
Q 016350 165 YVTEVSPPFVRGTYGAFIQIATCLGLM 191 (391)
Q Consensus 165 ~i~~~~~~~~r~~~~~~~~~~~~~g~~ 191 (391)
-+.|++|++.|....+.+........-
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~ 85 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKS 85 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999888877765554433
No 337
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=33.69 E-value=5.1e+02 Score=26.07 Aligned_cols=49 Identities=14% Similarity=0.036 Sum_probs=31.2
Q ss_pred HHHhhhc----chhhHHHHHhhHHHHHHHHHHHhhhhHHHH-HHHHHHhhhccc
Q 016350 108 SGWIADG----VGRRRAFQLCALPMIIGASISATTRNLIGM-LLGRFVVGTGMG 156 (391)
Q Consensus 108 ~g~l~dr----~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l-~~~r~l~G~~~g 156 (391)
++-++|. -||.+-++++.++++++++...+...++++ ..+-++.+++.+
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFI 96 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 3456664 566777888888888888887766555444 344444444333
No 338
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=33.24 E-value=81 Score=29.90 Aligned_cols=30 Identities=17% Similarity=0.045 Sum_probs=15.5
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 016350 319 AGLSSGLANVFVGIANLLGSVVAMVLMDKL 348 (391)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (391)
++.+-|.++....+..+++.+++|+.+-|+
T Consensus 357 SPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 357 SPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 344445545444455555555566655553
No 339
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=33.21 E-value=84 Score=21.17 Aligned_cols=21 Identities=14% Similarity=0.094 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHhhhcchhhH
Q 016350 99 GGAFIGSTLSGWIADGVGRRR 119 (391)
Q Consensus 99 ~~~~i~~~~~g~l~dr~Grr~ 119 (391)
+.+.+-.....+.+||..||.
T Consensus 57 ~~fviLi~~Ya~~mnrlD~~~ 77 (81)
T PF13937_consen 57 IVFVILIFVYAWRMNRLDRKY 77 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444566667778888887763
No 340
>KOG3500 consensus Vacuolar H+-ATPase V0 sector, subunit M9.7 (M9.2) [Energy production and conversion]
Probab=32.29 E-value=1e+02 Score=20.59 Aligned_cols=42 Identities=10% Similarity=-0.003 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 016350 329 FVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 370 (391)
Q Consensus 329 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (391)
.+.+...+.++.+.+...|...|.++....++.++++-++..
T Consensus 9 ~ftvfw~~v~~~~pi~~~kgP~~~li~~~lvlTAVCCwlfWl 50 (84)
T KOG3500|consen 9 VFTVFWGIVGICGPICFPKGPNRGLIRCMLVLTAVCCWLFWL 50 (84)
T ss_pred HHHHHHHHHHHhcceeccCCCCcChhHHHHHHHHHHHHHHHH
Confidence 344555566667777888888898888888888887776653
No 341
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=31.60 E-value=1.8e+02 Score=22.26 Aligned_cols=52 Identities=8% Similarity=0.006 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhh
Q 016350 95 SMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRNLIGMLLGRFVVG 152 (391)
Q Consensus 95 s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G 152 (391)
-.+.++..+.+...-.+..|..||+.=..+. ++..+.++|..|++++.++..
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~gi------Si~Gai~HN~gQl~va~~i~~ 119 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGI------SIAGAIAHNIGQLIVASLIIQ 119 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHH------HHHHHHHHHHHHHHHHHHHHc
Confidence 4556667777777778888887766533333 344567889988888877643
No 342
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.25 E-value=5.1e+02 Score=26.05 Aligned_cols=52 Identities=12% Similarity=0.009 Sum_probs=33.2
Q ss_pred HHHHhhhc----chhhHHHHHhhHHHHHHHHHHHhhhhHHHHH-HHHHHhhhccchh
Q 016350 107 LSGWIADG----VGRRRAFQLCALPMIIGASISATTRNLIGML-LGRFVVGTGMGLG 158 (391)
Q Consensus 107 ~~g~l~dr----~Grr~~l~~~~~~~~i~~~~~~~~~~~~~l~-~~r~l~G~~~g~~ 158 (391)
+++-+.|. -||.+-++++.++++++++...+...+.+++ ..-++.+++.++.
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 34445664 4667888999999999998888776555443 3444454444333
No 343
>COG1288 Predicted membrane protein [Function unknown]
Probab=29.44 E-value=4.7e+02 Score=24.37 Aligned_cols=101 Identities=17% Similarity=0.178 Sum_probs=44.9
Q ss_pred hhhHHHHH-hhHHHHHHHHHHHhhhhHHHHH--HHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHH
Q 016350 116 GRRRAFQL-CALPMIIGASISATTRNLIGML--LGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMG 192 (391)
Q Consensus 116 Grr~~l~~-~~~~~~i~~~~~~~~~~~~~l~--~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 192 (391)
||..+++. ..++++++...++....-..++ ..=++.-.|.-........+++ .+-|.+.+.. +..+..+
T Consensus 132 G~e~llI~~l~ilFslgGt~~Gm~EEaiaFypIliPv~ialGyDsi~~va~i~lg-----t~iG~~~St~---NPF~~~I 203 (481)
T COG1288 132 GKEFLLIPVLFILFSLGGTVFGMGEEAIAFYPILIPLMVALGYDSITGVAIIYIG-----TQIGFAASTM---NPFATVI 203 (481)
T ss_pred CCeEEEeeHHHHHHHhccccccchHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH-----hccchhhhhc---CchHHHH
Confidence 55444433 3455666666666554321111 1112222333333333333332 2233333332 3334455
Q ss_pred HHHhccc-cccccchhHHHHHHHHHHHHHHHHHh
Q 016350 193 SLLIGIP-VKEIAGWWRICFWVSIVPAAILCLAM 225 (391)
Q Consensus 193 ~~~~~~~-l~~~~~~w~~~f~~~~~~~~~~~~~~ 225 (391)
+.-+++. +.+-.+ ||...++......+.-+.+
T Consensus 204 Aq~iAGip~~sG~~-~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 204 AQNIAGIPFLSGMG-LRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred HhhhcCCcccccch-HHHHHHHHHHHHHHHHHHH
Confidence 5555543 333334 9999888665554444443
No 344
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=28.01 E-value=5.7e+02 Score=24.91 Aligned_cols=45 Identities=13% Similarity=0.208 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH----HhhhCch--HH-HHHHHHHHHHHHHHHH
Q 016350 325 LANVFVGIANLLGSVVAMVL----MDKLGRK--AL-LQWSFFSMAVSMAIQV 369 (391)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l----~d~~~~~--~~-~~~~~~~~~~~~~~~~ 369 (391)
..+..++++..+-.++.+.. ..|-|+. .+ ...+.++.+.+..++.
T Consensus 329 ~~l~~~gLG~~~Plll~~~~~~~~lpk~g~wm~~~k~~~G~~ll~~~~~ll~ 380 (571)
T PRK00293 329 LTLYLLALGMGLPLILITTFGNKLLPKSGPWMNQVKTAFGFVLLALPVFLLE 380 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555566554433333333 3333332 11 2345555555555444
No 345
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=27.10 E-value=4.8e+02 Score=23.68 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=23.7
Q ss_pred HHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHH
Q 016350 57 TLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVV 94 (391)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 94 (391)
..+..............++...+++|+++.-. |.+.
T Consensus 228 ~v~lv~Vv~lAe~lv~sIe~~v~~~Glp~afi--GvII 263 (366)
T PRK10599 228 IIHLIAVIAVTKMNASPLETLLTSMNAPVAFT--GFLV 263 (366)
T ss_pred HHHHHHHHHHHHHhHhhHHHHHHhcCCCHHHH--HHHH
Confidence 33333334445566788899999999986655 6665
No 346
>PRK10692 hypothetical protein; Provisional
Probab=26.71 E-value=1.3e+02 Score=20.43 Aligned_cols=17 Identities=29% Similarity=0.274 Sum_probs=9.1
Q ss_pred hhHHHHHhhHHHHHHHH
Q 016350 117 RRRAFQLCALPMIIGAS 133 (391)
Q Consensus 117 rr~~l~~~~~~~~i~~~ 133 (391)
||...+.|.++++++.+
T Consensus 3 Rk~a~~~GN~lMglGmv 19 (92)
T PRK10692 3 RKNASLLGNVLMGLGLV 19 (92)
T ss_pred chhhHHHhhHHHHHHHH
Confidence 45555555555555544
No 347
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=26.29 E-value=3.6e+02 Score=21.97 Aligned_cols=26 Identities=12% Similarity=0.084 Sum_probs=12.7
Q ss_pred cchhHHHHHHHHHHHHhhhchhhHHH
Q 016350 285 RHFRVVFIGSTLFALQQLSGINAIFY 310 (391)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (391)
...|...+-..+..+..++....+..
T Consensus 76 ~~~~~~~ld~~L~~~~if~~~~gi~~ 101 (206)
T PF06570_consen 76 SNPWLMALDNSLLFFGIFSLLFGIMG 101 (206)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555554444443333
No 348
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=25.95 E-value=86 Score=28.12 Aligned_cols=15 Identities=0% Similarity=0.018 Sum_probs=11.2
Q ss_pred hhcchhhHHHHHhhH
Q 016350 112 ADGVGRRRAFQLCAL 126 (391)
Q Consensus 112 ~dr~Grr~~l~~~~~ 126 (391)
.||+.-.|++.....
T Consensus 208 ~e~ft~sKllav~~s 222 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVS 222 (416)
T ss_pred cchhhHHHHHHHHHh
Confidence 899999997655443
No 349
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=25.37 E-value=2.5e+02 Score=19.86 Aligned_cols=24 Identities=17% Similarity=0.029 Sum_probs=11.1
Q ss_pred HHHHHhhh-cchhhHHHHHhhHHHH
Q 016350 106 TLSGWIAD-GVGRRRAFQLCALPMI 129 (391)
Q Consensus 106 ~~~g~l~d-r~Grr~~l~~~~~~~~ 129 (391)
.+.|...| ++|-++.+.+.+++.+
T Consensus 60 ~~lG~WLD~~~~t~~~~tl~~lllG 84 (100)
T TIGR02230 60 VAVGIWLDRHYPSPFSWTLTMLIVG 84 (100)
T ss_pred HHHHHHHHhhcCCCcHHHHHHHHHH
Confidence 33444444 4665554444443333
No 350
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=25.30 E-value=4.5e+02 Score=22.80 Aligned_cols=57 Identities=14% Similarity=0.026 Sum_probs=32.6
Q ss_pred HHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccc
Q 016350 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVK 201 (391)
Q Consensus 144 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 201 (391)
--..|.+.|+-. ..+..+++++.-.||++++--..--...+.+++..+.+++|-.+.
T Consensus 22 ~~~lr~~~g~~~-vlf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPF-VLFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHH-HHHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455688887744 334567788888998654433333333344444555555554443
No 351
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=25.25 E-value=2.4e+02 Score=22.61 Aligned_cols=21 Identities=14% Similarity=0.259 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHhhhCc
Q 016350 330 VGIANLLGSVVAMVLMDKLGR 350 (391)
Q Consensus 330 ~~~~~~~~~~~~g~l~d~~~~ 350 (391)
+-++..++.++.|++.||..+
T Consensus 91 yL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 91 YLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 445677888999999999875
No 352
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=25.03 E-value=1.2e+02 Score=16.22 Aligned_cols=20 Identities=20% Similarity=0.213 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 016350 328 VFVGIANLLGSVVAMVLMDK 347 (391)
Q Consensus 328 ~~~~~~~~~~~~~~g~l~d~ 347 (391)
....+++++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 34566777777777776554
No 353
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=24.69 E-value=1.1e+02 Score=21.56 Aligned_cols=49 Identities=10% Similarity=-0.017 Sum_probs=37.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 016350 322 SSGLANVFVGIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQVA 370 (391)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (391)
..|-.+..++...+..++..++.+|+...-+.=.++..++.++..++.+
T Consensus 56 a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 56 AFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILF 104 (109)
T ss_pred hhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEe
Confidence 4577888899999999999999999887666666676676666544433
No 354
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=23.76 E-value=4.1e+02 Score=21.73 Aligned_cols=28 Identities=25% Similarity=0.421 Sum_probs=15.2
Q ss_pred HHHHHHHHhhhc--chhhHHHHHhhHHHHHH
Q 016350 103 IGSTLSGWIADG--VGRRRAFQLCALPMIIG 131 (391)
Q Consensus 103 i~~~~~g~l~dr--~Grr~~l~~~~~~~~i~ 131 (391)
.|...+.++.++ .|+|. ++.|.++..++
T Consensus 173 ~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 173 LGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred HHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 333444444554 36665 66677666554
No 355
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=23.37 E-value=1.2e+02 Score=23.31 Aligned_cols=28 Identities=18% Similarity=0.096 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhh
Q 016350 91 GLVVSMCLGGAFIGSTLSGWIADGVGRR 118 (391)
Q Consensus 91 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr 118 (391)
.++.+...++..+..+-.|.++-.|...
T Consensus 99 ~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 99 VLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred HHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 5778888888889999999999888765
No 356
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=23.32 E-value=7e+02 Score=24.29 Aligned_cols=82 Identities=16% Similarity=0.047 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHHhhhh-HHHHHHHHHHhhhccchhhHHHHHHHhh
Q 016350 90 EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISATTRN-LIGMLLGRFVVGTGMGLGPTVAALYVTE 168 (391)
Q Consensus 90 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~~~~~-~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 168 (391)
.|+..-++.+|...|.-+..-+.+ .|-+..+ .+.+...+..++..+... +.-+=....+-.++.+...+.......|
T Consensus 452 ~GL~lFla~vG~~aG~~f~~~l~~-~G~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~t~~l~~a~~ 529 (562)
T TIGR03802 452 LGLALFIAVVGLSAGPQAVTAIKE-MGLTLFL-LGIVVTILPLIITMLIGKYVLKYDPALLLGALAGARTATPALGAVLE 529 (562)
T ss_pred HhHHHHHHHHHHhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhccCCCcHHHHHHHH
Confidence 367777777887777777776644 5666544 444444444333322221 1111111222223345556666777777
Q ss_pred cCCcc
Q 016350 169 VSPPF 173 (391)
Q Consensus 169 ~~~~~ 173 (391)
..+.+
T Consensus 530 ~~~~~ 534 (562)
T TIGR03802 530 RAGSS 534 (562)
T ss_pred hcCCC
Confidence 76433
No 357
>PF08551 DUF1751: Eukaryotic integral membrane protein (DUF1751); InterPro: IPR013861 This entry is found in eukaryotic integral membrane proteins. Q12239 from SWISSPROT, a Saccharomyces cerevisiae (Baker's yeast) protein, has been shown to localise COP II vesicles [].
Probab=23.29 E-value=2.7e+02 Score=19.57 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=23.4
Q ss_pred HHHHHHHHHhhhc-chhhHHHHHhhHHHHHHHHHH
Q 016350 102 FIGSTLSGWIADG-VGRRRAFQLCALPMIIGASIS 135 (391)
Q Consensus 102 ~i~~~~~g~l~dr-~Grr~~l~~~~~~~~i~~~~~ 135 (391)
.+.-+..|+..+| ||.|..+-...+...+.+++.
T Consensus 28 ~~~l~~~g~~lE~~WGs~E~lkFi~vv~~~tnl~~ 62 (99)
T PF08551_consen 28 LLTLFYGGRYLEPIWGSREFLKFILVVNVITNLLT 62 (99)
T ss_pred HHHHHHhhHHHHHhcChHHHHHHHHHHHHHhHHHH
Confidence 3445667777776 999988777766666665544
No 358
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=23.01 E-value=4.1e+02 Score=23.30 Aligned_cols=58 Identities=12% Similarity=0.062 Sum_probs=29.8
Q ss_pred HHHHHHHhhhhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchh
Q 016350 56 ATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGR 117 (391)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr 117 (391)
...+..........+......+.+.+|+++.-. |. +...++...--.+....+-|-|+
T Consensus 175 ~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~--g~--tl~a~~ts~PE~~~~i~a~~~g~ 232 (307)
T TIGR00367 175 LIIGLTGLVVGSRLLVDGAVQIAEIFGISEKII--GL--TLLAIGTSLPELVVSVAAARKGL 232 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH--HH--HHHHHHcccHHHHHHHHHHHcCC
Confidence 333333333444455667788999999976654 42 22233433333333333434454
No 359
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=22.61 E-value=1.9e+02 Score=19.80 Aligned_cols=33 Identities=15% Similarity=0.446 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHhhhccchhhHHHHHHHhhcCC
Q 016350 139 RNLIGMLLGRFVVGTGMGLGPTVAALYVTEVSP 171 (391)
Q Consensus 139 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 171 (391)
+--+=++++|.+.|-+.+...........|..|
T Consensus 29 pit~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~p 61 (89)
T PF04550_consen 29 PITLRLFIGRVILGSAVSVVAGAALIQFPDLPP 61 (89)
T ss_pred CCchhHHhHHHHHhhHHHHHHHHHHhcCCCCCH
Confidence 334557788888887766665555444444433
No 360
>PRK10720 uracil transporter; Provisional
Probab=22.41 E-value=5.5e+02 Score=23.89 Aligned_cols=52 Identities=12% Similarity=0.030 Sum_probs=22.4
Q ss_pred cchhhHHHHHhhHHHHHHHH---HHHhhhhHHHHHHHHHHhhhccchhhHHHHHHH
Q 016350 114 GVGRRRAFQLCALPMIIGAS---ISATTRNLIGMLLGRFVVGTGMGLGPTVAALYV 166 (391)
Q Consensus 114 r~Grr~~l~~~~~~~~i~~~---~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 166 (391)
|...|++...+.++..+..+ ..++..+.+.-.++-... ...+.........+
T Consensus 298 ~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i-~~fg~i~~~Gi~~l 352 (428)
T PRK10720 298 RVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSL-LLYGVIGASGIRVL 352 (428)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 33445555544444444444 334444444333333333 33344444444455
No 361
>PRK03612 spermidine synthase; Provisional
Probab=22.17 E-value=7.1e+02 Score=23.94 Aligned_cols=29 Identities=17% Similarity=0.202 Sum_probs=15.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH-HhhhCc
Q 016350 322 SSGLANVFVGIANLLGSVVAMVL-MDKLGR 350 (391)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~l-~d~~~~ 350 (391)
..|.++..-.++.++|+++.+++ ...+|-
T Consensus 146 ~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~ 175 (521)
T PRK03612 146 NVATVLAADYLGALVGGLAFPFLLLPRLGL 175 (521)
T ss_pred hhhhhHhHHhHHHHHHHHHHHHHHHHhcch
Confidence 34455555556666665555553 335554
No 362
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.23 E-value=4.6e+02 Score=28.42 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 016350 331 GIANLLGSVVAMVLMDKLGRKALLQWSFFSMAVSMAIQV 369 (391)
Q Consensus 331 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (391)
..|+++|.+++..+...+|.--..++..++.++++.++.
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIGLiLlT 179 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFT 179 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 468888888888888888775555555555555544433
No 363
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=21.23 E-value=38 Score=25.22 Aligned_cols=16 Identities=31% Similarity=0.495 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 016350 208 RICFWVSIVPAAILCL 223 (391)
Q Consensus 208 ~~~f~~~~~~~~~~~~ 223 (391)
||++++..++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4555544444433333
No 364
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=21.20 E-value=4.8e+02 Score=23.16 Aligned_cols=54 Identities=9% Similarity=0.062 Sum_probs=32.3
Q ss_pred hhhhcccchHHHhHhhhccCcchhHHHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHH
Q 016350 65 YHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQ 122 (391)
Q Consensus 65 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~ 122 (391)
.....+......+.+.+|+++.-. | .++..++..+--......+-|-|+-..-+
T Consensus 188 ~gs~~lv~~~~~ia~~lgis~~~i--G--~tiva~gtslPE~~~sv~a~~~g~~~~av 241 (325)
T PRK10734 188 MATRMVIDNATVLANYFAISELTI--G--LTVIAIGTSLPELATAIAGARKGENDIAV 241 (325)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHH--H--HHHHHHhccHHHHHHHHHHHHcCCCchHH
Confidence 333444556678999999986654 4 33444455555555666666666665433
No 365
>TIGR03647 Na_symport_sm probable solute:sodium symporter small subunit. Members of this family are highly hydrophobic bacterial proteins of about 90 amino acids in length. Members usually are found immediately upstream (sometimes fused to) a member of the solute:sodium symporter family, and therefore are a putative sodium:solute symporter small subunit. Members tend to be found in aquatic species, especially those from marine or other high salt environments.
Probab=21.14 E-value=2.7e+02 Score=18.61 Aligned_cols=21 Identities=10% Similarity=0.088 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHhhhcchhhH
Q 016350 99 GGAFIGSTLSGWIADGVGRRR 119 (391)
Q Consensus 99 ~~~~i~~~~~g~l~dr~Grr~ 119 (391)
+.+.+-.....+.+||..||.
T Consensus 53 ~~fviLi~~Ya~~m~rlD~~~ 73 (77)
T TIGR03647 53 YVFVVLIFVYAWRMNRLDRKY 73 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 344566677788889888774
No 366
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=21.08 E-value=2.1e+02 Score=27.46 Aligned_cols=42 Identities=17% Similarity=0.097 Sum_probs=26.0
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHHhccccccccch--hHHHH
Q 016350 170 SPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGW--WRICF 211 (391)
Q Consensus 170 ~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~--w~~~f 211 (391)
..+++||..+...-..+.+...++...++.+....++ |+...
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g~~W~~~~ 333 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGGKKWKKNS 333 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCCCceeehh
Confidence 4456678777777777777777766666665543332 65443
No 367
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=21.04 E-value=2.4e+02 Score=25.43 Aligned_cols=78 Identities=13% Similarity=0.063 Sum_probs=47.0
Q ss_pred HHhhhhhhcccchH-HHhHhhhccC-cchhH--HHHHHHHHHHHHHHHHHHHHHhhhcchhhHHHHHhhHHHHHHHHHHH
Q 016350 61 FLFGYHLGVVNEPL-ESISLDLGFN-GNTLA--EGLVVSMCLGGAFIGSTLSGWIADGVGRRRAFQLCALPMIIGASISA 136 (391)
Q Consensus 61 ~~~~~~~~~~~~~~-~~i~~~~~~~-~~~~~--~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~i~~~~~~ 136 (391)
.+...+.+.+-+-+ |...++++-+ +.+.+ ..|..-..++|..++..+.+++.|++|....+.++.+...++.+...
T Consensus 41 ~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 41 ALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 33444444444443 3444555533 12211 13556666777777778888999999999888888887777766655
Q ss_pred hh
Q 016350 137 TT 138 (391)
Q Consensus 137 ~~ 138 (391)
..
T Consensus 121 ~~ 122 (372)
T PF00854_consen 121 SG 122 (372)
T ss_dssp CC
T ss_pred hC
Confidence 44
No 368
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=20.82 E-value=3.3e+02 Score=20.72 Aligned_cols=26 Identities=19% Similarity=0.172 Sum_probs=19.7
Q ss_pred HHhhcCCccccchHHHHHHHHHHHHH
Q 016350 165 YVTEVSPPFVRGTYGAFIQIATCLGL 190 (391)
Q Consensus 165 ~i~~~~~~~~r~~~~~~~~~~~~~g~ 190 (391)
-+.|++|+..|......+........
T Consensus 57 ALkDm~Pp~~R~~i~~~~s~t~s~~k 82 (145)
T TIGR00986 57 ALKDIVPPTTRGWIYHKYSTTTNFVK 82 (145)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 46899999999988887776555443
No 369
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=20.71 E-value=5e+02 Score=23.53 Aligned_cols=37 Identities=8% Similarity=0.035 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhhhhhhcccchHHHhHhhhccCcchh
Q 016350 52 HVLVATLSSFLFGYHLGVVNEPLESISLDLGFNGNTL 88 (391)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 88 (391)
....+..+..........+....+.+.+++|+++.-.
T Consensus 222 ~i~~l~~~~~~l~~~a~~lv~~~~~ia~~~gis~~~i 258 (365)
T TIGR00846 222 AAAWLVGATIVVALLAEYLVDTIESAVESWGLSVAFI 258 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 3444444555555555556677888999999976554
No 370
>PF07281 INSIG: Insulin-induced protein (INSIG)
Probab=20.64 E-value=4.6e+02 Score=21.22 Aligned_cols=82 Identities=13% Similarity=0.081 Sum_probs=41.1
Q ss_pred HHHHHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHH
Q 016350 144 MLLGRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAGWWRICFWVSIVPAAILCL 223 (391)
Q Consensus 144 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~w~~~f~~~~~~~~~~~~ 223 (391)
...+.-+.|+..|...|..-....|--+ .......+....-.++.++|-..+..=.+ |....-.....+++...
T Consensus 46 vp~~~G~agv~~G~l~P~lD~~~~~~~~--~~~~~~~w~~v~R~i~~FvGi~~airkl~----w~s~~Q~s~~lalln~~ 119 (193)
T PF07281_consen 46 VPPLWGLAGVLLGLLLPWLDSFLGESKP--RSSRKPDWSSVLRSIGAFVGISFAIRKLP----WSSSLQASITLALLNPG 119 (193)
T ss_pred hhHHHHHHHHHHHhhHHHHHHhcccccc--cCCccccHHHHHHHHHHHHHHHHHHhhCC----CCcHHHHHHHHHHHHHH
Confidence 3445566777777777766555333311 11222233333445555555555433222 54444444555555556
Q ss_pred Hhhccccc
Q 016350 224 AMVFCAES 231 (391)
Q Consensus 224 ~~~~~~e~ 231 (391)
+++++..+
T Consensus 120 LW~lfDrT 127 (193)
T PF07281_consen 120 LWWLFDRT 127 (193)
T ss_pred HHHHhCCc
Confidence 66666544
No 371
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=20.30 E-value=3.4e+02 Score=19.53 Aligned_cols=21 Identities=5% Similarity=-0.183 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHhhhCch
Q 016350 331 GIANLLGSVVAMVLMDKLGRK 351 (391)
Q Consensus 331 ~~~~~~~~~~~g~l~d~~~~~ 351 (391)
.++..++..+.....+++.-.
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~ 57 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTG 57 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCch
Confidence 333444444455556665543
No 372
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=20.16 E-value=3.7e+02 Score=19.95 Aligned_cols=24 Identities=17% Similarity=0.167 Sum_probs=12.6
Q ss_pred HHHhhhccchhhHHHHHHHhhcCC
Q 016350 148 RFVVGTGMGLGPTVAALYVTEVSP 171 (391)
Q Consensus 148 r~l~G~~~g~~~~~~~~~i~~~~~ 171 (391)
|.+.+.|.-+.+++..++..|...
T Consensus 69 ~~~l~tGf~GgfTTFSTf~~E~~~ 92 (127)
T PRK14200 69 RQIIGLGFLGALTTFSTFSMDNVL 92 (127)
T ss_pred HHHHHHHHhccchhHHHHHHHHHH
Confidence 444444444444555566666554
No 373
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=20.07 E-value=5.1e+02 Score=23.96 Aligned_cols=59 Identities=12% Similarity=0.031 Sum_probs=43.9
Q ss_pred HHHHhhhccchhhHHHHHHHhhcCCccccchHHHHHHHHHHHHHHHHHHhccccccccc
Q 016350 147 GRFVVGTGMGLGPTVAALYVTEVSPPFVRGTYGAFIQIATCLGLMGSLLIGIPVKEIAG 205 (391)
Q Consensus 147 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ 205 (391)
...+.+...-..+...++.-+.+.+|...|+.|.+.+.-.++|..--..+...+.+..+
T Consensus 375 ~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 375 SYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 35555555666667778889999999999999999999988886655555555555444
No 374
>PF15050 SCIMP: SCIMP protein
Probab=20.04 E-value=64 Score=23.31 Aligned_cols=12 Identities=42% Similarity=1.478 Sum_probs=8.1
Q ss_pred chhHHHHHHHHH
Q 016350 205 GWWRICFWVSIV 216 (391)
Q Consensus 205 ~~w~~~f~~~~~ 216 (391)
.|||--||+...
T Consensus 2 ~WWr~nFWiiLA 13 (133)
T PF15050_consen 2 SWWRDNFWIILA 13 (133)
T ss_pred chHHhchHHHHH
Confidence 368988887433
Done!