Query 016353
Match_columns 391
No_of_seqs 209 out of 1385
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 12:09:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016353.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016353hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydy_A Glycerophosphoryl diest 100.0 3E-52 1E-56 406.5 24.7 321 5-363 6-356 (356)
2 3qvq_A Phosphodiesterase OLEI0 100.0 7.3E-52 2.5E-56 385.1 24.4 245 39-365 5-250 (252)
3 2pz0_A Glycerophosphoryl diest 100.0 7.8E-52 2.7E-56 385.0 22.9 242 40-364 8-250 (252)
4 2oog_A Glycerophosphoryl diest 100.0 7.1E-51 2.4E-55 385.6 24.1 255 39-364 19-280 (287)
5 3ks6_A Glycerophosphoryl diest 100.0 1.1E-50 3.8E-55 376.7 21.6 242 43-364 2-243 (250)
6 2otd_A Glycerophosphodiester p 100.0 2.3E-50 8E-55 374.1 22.8 240 42-363 5-245 (247)
7 3ch0_A Glycerophosphodiester p 100.0 1.2E-49 4.1E-54 374.6 22.3 258 42-360 7-271 (272)
8 2o55_A Putative glycerophospho 100.0 7.4E-49 2.5E-53 366.3 25.0 241 41-364 4-255 (258)
9 3l12_A Putative glycerophospho 100.0 1E-48 3.5E-53 375.2 25.4 276 41-366 15-309 (313)
10 3mz2_A Glycerophosphoryl diest 100.0 4.1E-48 1.4E-52 366.3 24.2 264 37-378 25-289 (292)
11 1zcc_A Glycerophosphodiester p 100.0 4.6E-50 1.6E-54 372.2 10.0 231 44-364 2-234 (248)
12 3no3_A Glycerophosphodiester p 100.0 3.5E-48 1.2E-52 357.2 19.6 233 42-366 3-237 (238)
13 1vd6_A Glycerophosphoryl diest 100.0 9.6E-47 3.3E-51 344.7 17.7 218 41-362 5-223 (224)
14 1o1z_A GDPD, glycerophosphodie 100.0 2E-46 6.8E-51 344.6 16.2 220 41-362 10-234 (234)
15 3i10_A Putative glycerophospho 100.0 7.7E-44 2.6E-48 333.9 19.8 258 40-366 14-275 (278)
16 1xx1_A Smase I, sphingomyelina 100.0 8.1E-37 2.8E-41 288.9 9.0 236 41-365 3-264 (285)
17 3rlg_A Sphingomyelin phosphodi 99.9 1.1E-24 3.8E-29 201.0 11.6 240 41-364 25-280 (302)
18 1djx_A PLC-D1, phosphoinositid 95.4 0.0082 2.8E-07 61.9 3.8 49 48-96 178-229 (624)
19 2zkm_X 1-phosphatidylinositol- 95.1 0.012 4.1E-07 62.3 4.0 49 48-96 326-379 (799)
20 3qr0_A Phospholipase C-beta (P 94.8 0.016 5.6E-07 61.2 3.9 49 48-96 337-388 (816)
21 3ohm_B 1-phosphatidylinositol- 93.5 0.033 1.1E-06 59.3 3.0 49 48-96 330-383 (885)
22 3kts_A Glycerol uptake operon 91.6 1.5 5.3E-05 37.7 10.5 142 154-357 38-183 (192)
23 3h4x_A Phosphatidylinositol-sp 91.0 0.59 2E-05 43.4 7.7 49 44-96 32-81 (339)
24 1vkf_A Glycerol uptake operon 89.8 0.92 3.2E-05 38.9 7.4 138 155-357 41-181 (188)
25 3vnd_A TSA, tryptophan synthas 81.6 14 0.00049 33.3 11.4 38 44-81 18-55 (267)
26 3nav_A Tryptophan synthase alp 73.4 52 0.0018 29.6 13.3 38 44-81 20-57 (271)
27 3kts_A Glycerol uptake operon 64.0 16 0.00054 31.3 6.6 57 300-364 43-100 (192)
28 4e38_A Keto-hydroxyglutarate-a 62.7 53 0.0018 28.8 10.0 42 299-356 115-156 (232)
29 1vkf_A Glycerol uptake operon 58.1 16 0.00053 31.2 5.4 57 300-364 45-101 (188)
30 2rbg_A Putative uncharacterize 56.2 4.3 0.00015 31.4 1.5 39 301-352 47-92 (126)
31 3q58_A N-acetylmannosamine-6-p 54.9 1.1E+02 0.0036 26.7 13.5 119 196-353 36-156 (229)
32 1wv2_A Thiazole moeity, thiazo 54.7 1.2E+02 0.0041 27.2 12.5 127 156-353 83-216 (265)
33 2p10_A MLL9387 protein; putati 50.8 9.7 0.00033 34.7 3.1 66 301-381 153-221 (286)
34 3a24_A Alpha-galactosidase; gl 49.1 16 0.00056 37.2 4.9 48 301-356 350-397 (641)
35 1wv2_A Thiazole moeity, thiazo 48.3 16 0.00054 32.9 4.1 36 303-352 127-162 (265)
36 2d73_A Alpha-glucosidase SUSB; 45.7 26 0.0009 36.3 5.7 51 301-355 421-471 (738)
37 3igs_A N-acetylmannosamine-6-p 45.3 1.5E+02 0.0052 25.7 13.4 119 196-353 36-156 (232)
38 1tqj_A Ribulose-phosphate 3-ep 42.2 12 0.0004 32.9 2.3 29 57-88 16-44 (230)
39 3o27_A Putative uncharacterize 38.8 16 0.00054 25.4 1.9 43 47-90 14-59 (68)
40 1uas_A Alpha-galactosidase; TI 38.6 65 0.0022 30.1 7.0 54 301-355 77-132 (362)
41 3lab_A Putative KDPG (2-keto-3 37.0 51 0.0017 28.7 5.5 43 299-357 94-142 (217)
42 1rpx_A Protein (ribulose-phosp 34.9 16 0.00054 31.8 1.9 24 56-79 21-44 (230)
43 3kzp_A LMO0111 protein, putati 34.5 37 0.0013 29.2 4.3 37 301-351 189-225 (235)
44 1h1y_A D-ribulose-5-phosphate 34.0 19 0.00065 31.3 2.3 28 56-86 17-44 (228)
45 2obb_A Hypothetical protein; s 32.8 45 0.0015 26.8 4.2 50 300-359 29-80 (142)
46 3a5v_A Alpha-galactosidase; be 32.5 91 0.0031 29.6 7.0 55 301-355 77-131 (397)
47 3s83_A Ggdef family protein; s 32.2 31 0.0011 30.3 3.5 40 301-354 199-238 (259)
48 4hjf_A Ggdef family protein; s 32.2 36 0.0012 31.7 4.0 39 301-353 272-310 (340)
49 2y8u_A Chitin deacetylase; hyd 32.0 2E+02 0.007 24.7 8.8 28 297-324 132-159 (230)
50 4f3h_A Fimxeal, putative uncha 31.7 24 0.00083 30.9 2.7 39 301-353 203-241 (250)
51 2cc0_A Acetyl-xylan esterase; 31.6 2.1E+02 0.007 23.7 8.5 28 297-324 104-131 (195)
52 3tlq_A Regulatory protein YDIV 31.3 22 0.00075 31.2 2.2 38 301-352 188-225 (242)
53 3glc_A Aldolase LSRF; TIM barr 30.2 76 0.0026 28.9 5.7 56 302-363 162-220 (295)
54 1m5w_A Pyridoxal phosphate bio 30.0 1.2E+02 0.0043 26.6 6.8 63 277-353 81-155 (243)
55 2r6o_A Putative diguanylate cy 29.7 38 0.0013 30.8 3.6 47 301-361 223-272 (294)
56 1xm3_A Thiazole biosynthesis p 28.5 3E+02 0.01 24.1 16.1 185 42-351 12-205 (264)
57 2c6q_A GMP reductase 2; TIM ba 27.3 56 0.0019 30.6 4.4 40 302-355 150-192 (351)
58 2aam_A Hypothetical protein TM 26.5 1.8E+02 0.0061 26.6 7.6 85 299-384 57-172 (309)
59 4gib_A Beta-phosphoglucomutase 26.0 3E+02 0.01 23.3 9.4 43 300-363 196-239 (250)
60 2iw0_A Chitin deacetylase; hyd 26.0 2.2E+02 0.0074 24.9 8.0 28 297-324 146-173 (254)
61 3vk5_A MOEO5; TIM barrel, tran 25.3 92 0.0031 28.2 5.2 55 297-365 210-275 (286)
62 3hv8_A Protein FIMX; EAL phosp 24.9 50 0.0017 29.1 3.5 39 301-353 212-250 (268)
63 3ffs_A Inosine-5-monophosphate 24.8 69 0.0023 30.6 4.6 38 301-352 173-211 (400)
64 3r2g_A Inosine 5'-monophosphat 24.0 68 0.0023 30.2 4.3 37 302-352 130-168 (361)
65 1vhc_A Putative KHG/KDPG aldol 23.5 3.5E+02 0.012 23.2 10.3 41 299-355 98-138 (224)
66 3bw2_A 2-nitropropane dioxygen 22.6 86 0.0029 29.3 4.8 41 300-355 134-174 (369)
67 3bo9_A Putative nitroalkan dio 22.6 73 0.0025 29.3 4.2 41 300-355 113-153 (326)
68 3gfz_A Klebsiella pneumoniae B 22.4 66 0.0023 30.7 4.0 39 301-353 351-389 (413)
69 2xz9_A Phosphoenolpyruvate-pro 22.2 1.1E+02 0.0039 28.1 5.4 68 301-384 237-306 (324)
70 1szn_A Alpha-galactosidase; (b 22.0 1.9E+02 0.0065 27.6 7.2 54 301-355 80-134 (417)
71 4do4_A Alpha-N-acetylgalactosa 21.5 1.8E+02 0.0061 27.2 6.9 54 301-354 86-140 (400)
72 1qop_A Tryptophan synthase alp 21.3 71 0.0024 28.4 3.7 26 57-82 30-55 (268)
73 3ctl_A D-allulose-6-phosphate 21.0 44 0.0015 29.2 2.2 27 58-88 13-39 (231)
74 3pjx_A Cyclic dimeric GMP bind 20.9 60 0.0021 30.9 3.4 39 301-353 383-421 (430)
75 3sy8_A ROCR; TIM barrel phosph 20.7 57 0.002 30.7 3.2 40 301-354 336-375 (400)
76 3t7a_A Inositol pyrophosphate 20.6 1.2E+02 0.0042 27.9 5.1 42 48-89 239-284 (330)
77 3cu2_A Ribulose-5-phosphate 3- 20.6 53 0.0018 28.9 2.6 29 57-88 25-53 (237)
78 3o6c_A PNP synthase, pyridoxin 20.1 1E+02 0.0034 27.5 4.3 44 301-358 114-157 (260)
79 3v1h_A 1-phosphatidylinositol 20.1 73 0.0025 29.2 3.6 29 64-92 51-79 (306)
No 1
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=3e-52 Score=406.45 Aligned_cols=321 Identities=32% Similarity=0.551 Sum_probs=213.6
Q ss_pred hhhHHHHHHHHHhhcCCcCCCCCCCCCccccCCCCCCCCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCC
Q 016353 5 STCFIPLLFLSLIAGCAARPLYPLPSKLDIHKQPLQTSRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKD 84 (391)
Q Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkD 84 (391)
.++++.++++.+++||..... ...+|.+|||||+++.+||||++||+.|++.|+|+||+|||+|||
T Consensus 6 ~~~~~~~~~~~~~~~c~~~~~--------------~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkD 71 (356)
T 1ydy_A 6 KNLSMAIMMSTIVMGSSAMAA--------------DSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKD 71 (356)
T ss_dssp -------------------------------------CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTT
T ss_pred HHHHHHHHHHHhhhhhhhccc--------------cCCCceEEEeCCCCCCCCcchHHHHHHHHHcCCCEEEeeeEECCC
Confidence 445555666777899998664 146799999999999999999999999999999999999999999
Q ss_pred CeEEEEcCCCcccccccCCccccccccccccccCcccccceecccCHHHHcccccccccc---------CCc--cccCCC
Q 016353 85 GVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGVNTTGFFVVDFTLEELKTLRAKQRYS---------FRD--QQYNGK 153 (391)
Q Consensus 85 g~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~~~~g~~v~dlt~~EL~~l~~~~~~~---------~r~--~~~~~~ 153 (391)
|++||+||.+++|+|++.. .++.++++ +|. | +|.++||+||++|+++.||. |+. ....+.
T Consensus 72 g~lVv~HD~~l~rtt~~~~--~f~~~~~~---~g~---~-~v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~ 142 (356)
T 1ydy_A 72 DNLVVLHDHYLDRVTDVAD--RFPDRARK---DGR---Y-YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSD 142 (356)
T ss_dssp SCEEECSSSBCTTTBSHHH--HSTTCCCT---TSC---C-BGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCSC
T ss_pred CcEEEeCCChHHhhcCccc--cccccccc---CCC---c-chhhCcHHHHHhCCCCccccccccccccccccccccccCC
Confidence 9999999999999998653 34443321 121 4 79999999999999998763 111 111124
Q ss_pred ccccCHHHHHHHHHhc----CCceeEEEeecCchhccccccccCcccHHHHHHHHHHHcCCCCcccccccCCCCEEEEcc
Q 016353 154 FPIITFEEYISIALDA----QRVVGIYPEMKNPVFINQHVKWADGKKFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSF 229 (391)
Q Consensus 154 ~~ipTLeEvL~~~~~~----~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf 229 (391)
++||||+|+|++++.. +..+.++||||.+..... .+..+++.++++++++++.. ..++++|+||
T Consensus 143 ~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~~~~-----~~~~~~~~v~~~l~~~~~~~-------~~~~v~i~SF 210 (356)
T 1ydy_A 143 FRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQ-----EGKDIAAKTLEVLKKYGYTG-------KDDKVYLQCF 210 (356)
T ss_dssp CCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHHHHH-----TTCCHHHHHHHHHHHTTCCS-------TTSSBEEEES
T ss_pred CcCCCHHHHHHHHHHhhhcccCCceEEEeecCcccccc-----cchhHHHHHHHHHHHcCCCC-------CCCCEEEEcC
Confidence 6999999999999852 235899999998653211 23468999999999999742 0158999999
Q ss_pred ChhHHHHHhhc-----CCC-ceEEEEeccccccc--------ccccccccccchHHHHHHHhhhhhcCCCcceeeec-CC
Q 016353 230 APTSLVYISNK-----TDS-PKIFLIDDVDILTE--------DTNQSYSEITSDAYLNYIKEYCVGIGPWKDTVVPV-AN 294 (391)
Q Consensus 230 ~~~~l~~l~~~-----~p~-~~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~l~~~-~~ 294 (391)
++..|+++++. .|. +.++|+....+... .....|..+.....+..+..++.++++....+.+. ..
T Consensus 211 ~~~~l~~~~~~~~p~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~ 290 (356)
T 1ydy_A 211 DADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQ 290 (356)
T ss_dssp CHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCB
T ss_pred CHHHHHHHHhhcccccCCCceEEEEeccCcccccccccccccccccchhhhcchhhHHHHHhhCeEEccCHHHhcccccc
Confidence 99999999998 564 55667653221000 00112322222334555666666666654333211 01
Q ss_pred CCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhHHHHHh
Q 016353 295 NYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSLHNYQE 363 (391)
Q Consensus 295 ~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l~~~~~ 363 (391)
.....++++|+.+|++|+.|++||||++. +. .|..++...+.+.+.++||||||||+|+.+.++++
T Consensus 291 ~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~-l~--~~~~d~~~~~~~~l~~~GVDgIiTD~P~~~~~~l~ 356 (356)
T 1ydy_A 291 PGNIKLTGMVQDAQQNKLVVHPYTVRSDK-LP--EYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLN 356 (356)
T ss_dssp TTBCCBCSHHHHHHHTTCEECCBCBCTTS-CC--TTCSSHHHHHHHHHTTSCCSEEEESCHHHHHHHHC
T ss_pred ccccCCHHHHHHHHHCCCEEEEEEECccc-cc--ccccCHHHHHHHHHHHcCCCEEEeCCHHHHHHhhC
Confidence 11234589999999999999999999873 21 23444444444446789999999999999988763
No 2
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=7.3e-52 Score=385.15 Aligned_cols=245 Identities=24% Similarity=0.294 Sum_probs=199.5
Q ss_pred CCCCCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccC
Q 016353 39 LQTSRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQG 118 (391)
Q Consensus 39 ~~~~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g 118 (391)
+..+.|.+|||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|++.
T Consensus 5 ~~~~~p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~---------------- 68 (252)
T 3qvq_A 5 AYSFLPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTDGD---------------- 68 (252)
T ss_dssp GGGGCCSEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSSCC----------------
T ss_pred cCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCCccccccCCC----------------
Confidence 3456799999999999999999999999999999999999999999999999999999999987
Q ss_pred cccccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHH
Q 016353 119 VNTTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFE 198 (391)
Q Consensus 119 ~~~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~ 198 (391)
| .|.++||+||++++++.||. +.|.+ ++||||+|+|+.++.. .+.++||||.... ....++
T Consensus 69 ----~-~v~~~t~~el~~l~~~~~~~---~~~~~-~~iptL~evl~~~~~~--~~~l~iEiK~~~~--------~~~~~~ 129 (252)
T 3qvq_A 69 ----G-LIYKTPLAELKQLDAGSWKG---QEYQQ-ETIPTLLEAIEVISQY--GMGLNLELKPCEG--------LEEETI 129 (252)
T ss_dssp ----S-BGGGSCHHHHTTSCSSTTTC---GGGTT-CCCCBHHHHHHHHHHT--TCEEEEEECCCTT--------CHHHHH
T ss_pred ----c-eeecCcHHHHhcCCCCCccC---ccCCC-CcCcCHHHHHHHHhcc--CcEEEEEecCCCC--------ccHHHH
Confidence 4 79999999999999998764 44555 5999999999999754 3899999997532 112477
Q ss_pred HHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceE-EEEecccccccccccccccccchHHHHHHHh
Q 016353 199 DKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKI-FLIDDVDILTEDTNQSYSEITSDAYLNYIKE 277 (391)
Q Consensus 199 ~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 277 (391)
+.+.+++++++... ++++++||++..|+.+++..|...+ +++.... ......+.
T Consensus 130 ~~v~~~l~~~~~~~---------~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~---------------~~~~~~~~- 184 (252)
T 3qvq_A 130 AASVEVLKQHWPQD---------LPLLFSSFNYFALVSAKALWPEIARGYNVSAIP---------------SAWQERLE- 184 (252)
T ss_dssp HHHHHHHHHHSCTT---------SCEEEEESCHHHHHHHHHHCTTSCEEEECSSCC---------------TTHHHHHH-
T ss_pred HHHHHHHHHhCccc---------CCEEEEeCCHHHHHHHHHHCCCCcEEEEEecCc---------------hhHHHHHH-
Confidence 88899999987642 5899999999999999999886554 4443210 00111111
Q ss_pred hhhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchh
Q 016353 278 YCVGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGS 357 (391)
Q Consensus 278 ~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~ 357 (391)
.+++ ..+.+ ++..+++++++.+|++|++|++||||+++++ +++.++||||||||+|+.
T Consensus 185 ---~~~~--~~i~~---~~~~~~~~~v~~~~~~G~~v~~WTvn~~~~~--------------~~l~~~GVdgIiTD~P~~ 242 (252)
T 3qvq_A 185 ---HLDC--AGLHI---HQSFFDVQQVSDIKAAGYKVLAFTINDESLA--------------LKLYNQGLDAVFSDYPQK 242 (252)
T ss_dssp ---HHTC--SEEEE---EGGGCCHHHHHHHHHTTCEEEEECCCCHHHH--------------HHHHHTTCCEEEESSHHH
T ss_pred ---HcCC--eEEec---chhhCCHHHHHHHHHCCCEEEEEcCCCHHHH--------------HHHHHcCCCEEEeCCHHH
Confidence 1222 23333 3456789999999999999999999999998 689999999999999999
Q ss_pred HHHHHhcc
Q 016353 358 LHNYQELT 365 (391)
Q Consensus 358 l~~~~~~~ 365 (391)
++++++.+
T Consensus 243 ~~~~l~~~ 250 (252)
T 3qvq_A 243 IQSAIDSH 250 (252)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99998754
No 3
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=7.8e-52 Score=385.03 Aligned_cols=242 Identities=31% Similarity=0.440 Sum_probs=197.3
Q ss_pred CCCCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCc
Q 016353 40 QTSRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGV 119 (391)
Q Consensus 40 ~~~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~ 119 (391)
..-+|.+|||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|++.
T Consensus 8 ~~~~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~----------------- 70 (252)
T 2pz0_A 8 HSMKTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTNGE----------------- 70 (252)
T ss_dssp ---CCEEEEETTTTTTSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSSCC-----------------
T ss_pred ccCCceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCCcccccCCCC-----------------
Confidence 345799999999999999999999999999999999999999999999999999999999987
Q ss_pred ccccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHH
Q 016353 120 NTTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFED 199 (391)
Q Consensus 120 ~~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~ 199 (391)
| .|.++||+||++++++.||. +.|.+ ++||||+|+|+++++ ..+.++||||.+.. ....+++
T Consensus 71 ---g-~v~~~t~~eL~~l~~~~~~~---~~~~~-~~iPtL~evL~~~~~--~~~~l~iEiK~~~~--------~~~~~~~ 132 (252)
T 2pz0_A 71 ---G-FVKDFTLEEIKKLDAGIKFG---EKFAG-ERIPTLYEVFELIGD--KDFLVNIEIKSGIV--------LYPGIEE 132 (252)
T ss_dssp ---S-BGGGSCHHHHTTSCSSTTTC---GGGTT-CCCCBHHHHHHHHTT--SCCEEEEEECCSSC--------CCTTHHH
T ss_pred ---c-chhhCcHHHHhhcCCCCCCC---CCCCC-CcCCCHHHHHHHhhh--cCCeEEEEeCCCCc--------ccHHHHH
Confidence 4 79999999999999998764 34555 599999999999964 24899999998642 1235889
Q ss_pred HHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceE-EEEecccccccccccccccccchHHHHHHHhh
Q 016353 200 KFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKI-FLIDDVDILTEDTNQSYSEITSDAYLNYIKEY 278 (391)
Q Consensus 200 ~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 278 (391)
.++++++++++. ++++++||++..|+++++..|...+ +++..... . ....+.
T Consensus 133 ~v~~~l~~~~~~----------~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~----------~-----~~~~~~-- 185 (252)
T 2pz0_A 133 KLIKAIKEYNFE----------ERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLV----------E-----PWHMAL-- 185 (252)
T ss_dssp HHHHHHHHTTCT----------TTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCS----------S-----THHHHH--
T ss_pred HHHHHHHhcCCC----------CCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccc----------c-----HHHHHH--
Confidence 999999999876 5899999999999999999886554 55432210 0 011111
Q ss_pred hhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhH
Q 016353 279 CVGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSL 358 (391)
Q Consensus 279 ~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l 358 (391)
.+++ +.+.+ ++..+++++++.+|++|+.|++||+|+++++ +++.++||||||||+|+.+
T Consensus 186 --~~~~--~~i~~---~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~--------------~~l~~~GvdgIiTD~P~~~ 244 (252)
T 2pz0_A 186 --RMEA--YSLHP---FYFNIIPELVEGCKKNGVKLFPWTVDRKEDM--------------ERMIKAGVDGIITDDPETL 244 (252)
T ss_dssp --HTTC--SEEEE---BGGGCCHHHHHHHHHTTCEECCBCCCSHHHH--------------HHHHHHTCSEEEESCHHHH
T ss_pred --HcCC--eEEec---chhcCCHHHHHHHHHCCCEEEEECCCCHHHH--------------HHHHHcCCCEEEcCCHHHH
Confidence 1221 23333 3455689999999999999999999999988 5789999999999999999
Q ss_pred HHHHhc
Q 016353 359 HNYQEL 364 (391)
Q Consensus 359 ~~~~~~ 364 (391)
.++++.
T Consensus 245 ~~~l~~ 250 (252)
T 2pz0_A 245 INLVRK 250 (252)
T ss_dssp HHHHC-
T ss_pred HHHHhh
Confidence 998763
No 4
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=7.1e-51 Score=385.63 Aligned_cols=255 Identities=31% Similarity=0.476 Sum_probs=200.8
Q ss_pred CCCCCCEEEecCCCCCCCchhHHHHHHHH-HHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCcccccccccccccc
Q 016353 39 LQTSRPYNLAHRGSNGEFPEETAAAYMRA-IEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQ 117 (391)
Q Consensus 39 ~~~~~p~iiaHRG~~~~~pENTl~Af~~A-~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~ 117 (391)
+....|.+|||||+++.+||||++||+.| ++.|+|+||+|||+||||++||+||.+++|+|++.
T Consensus 19 ~~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~--------------- 83 (287)
T 2oog_A 19 LTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGH--------------- 83 (287)
T ss_dssp TTSCSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSSCC---------------
T ss_pred CCCCcceEEecCCCCCCCCchhHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCChhcccCCCC---------------
Confidence 34577999999999999999999999999 69999999999999999999999999999999987
Q ss_pred CcccccceecccCHHHHccccccccccC-----CccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhcccccccc
Q 016353 118 GVNTTGFFVVDFTLEELKTLRAKQRYSF-----RDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWA 192 (391)
Q Consensus 118 g~~~~g~~v~dlt~~EL~~l~~~~~~~~-----r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~ 192 (391)
| .|.++||+||++|+++.||.- +...|.+ ++||||+|+|+.++ +.+.++||||.+..
T Consensus 84 -----g-~v~d~T~~eL~~l~~~~~f~~~~p~~~~~~~~~-~~iPtL~evL~~~~---~~~~l~IEiK~~~~-------- 145 (287)
T 2oog_A 84 -----G-KVEDYTLDELKQLDAGSWFNKKYPKYARASYKN-AKVPTLDEILERYG---PNANYYIETKSPDV-------- 145 (287)
T ss_dssp -----S-BGGGSCHHHHTTSCSSHHHHHHCGGGCCGGGTT-CCCCBHHHHHHHHC---TTSCEEEECCCTTT--------
T ss_pred -----e-ehhhCcHHHHHhcCCCcccCccCccccccccCC-ccCCCHHHHHHhhC---cCceEEEEECCCCC--------
Confidence 4 799999999999999987631 1123344 59999999999984 35789999998542
Q ss_pred CcccHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCC-ceEEEEecccccccccccccccccchHH
Q 016353 193 DGKKFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDS-PKIFLIDDVDILTEDTNQSYSEITSDAY 271 (391)
Q Consensus 193 ~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 271 (391)
...+++.++++++++++.... ....++++|+||++..|.++++..|. +.++++..... .. .....
T Consensus 146 -~~~~~~~v~~~l~~~~~~~~~---~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~---------~~-~~~~~ 211 (287)
T 2oog_A 146 -YPGMEEQLLASLKKHHLLNNN---KLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGEL---------QQ-FNDQR 211 (287)
T ss_dssp -STTHHHHHHHHHHHTTCSSHH---HHHTTSEEEEESCHHHHHHHHHHCTTSCEEEEECTTTG---------GG-CCHHH
T ss_pred -cchHHHHHHHHHHHcCCcccc---cCCCCCEEEEeCCHHHHHHHHHhCCCCcEEEEecCCcc---------cc-cCHHH
Confidence 235789999999999872000 00015899999999999999999885 55566543211 00 11222
Q ss_pred HHHHHhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEE
Q 016353 272 LNYIKEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLF 351 (391)
Q Consensus 272 ~~~i~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIi 351 (391)
+..+..++.++++ ++..+++++++.+|++|+.|++||||+++++ .++.++||||||
T Consensus 212 ~~~~~~~~~~v~~----------~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~--------------~~l~~~GVdgIi 267 (287)
T 2oog_A 212 LKEIRSYAIGLGP----------DYTDLTEQNTHHLKDLGFIVHPYTVNEKADM--------------LRLNKYGVDGVF 267 (287)
T ss_dssp HHHHHTTCSEEEE----------BGGGCCHHHHHHHHHTTCEECCBCCCSHHHH--------------HHHHHHTCSEEE
T ss_pred HHHHhhhheEEcc----------cHhhcCHHHHHHHHHCCCeEEEEeCCCHHHH--------------HHHHHcCCCEEE
Confidence 3344444433332 3445689999999999999999999999988 579999999999
Q ss_pred eCCchhHHHHHhc
Q 016353 352 TDFPGSLHNYQEL 364 (391)
Q Consensus 352 TD~P~~l~~~~~~ 364 (391)
||+|+.+.+++..
T Consensus 268 TD~P~~~~~~~~~ 280 (287)
T 2oog_A 268 TNFADKYKEVIKE 280 (287)
T ss_dssp ESCHHHHHHHHHC
T ss_pred eCCHHHHHHHHhc
Confidence 9999999998764
No 5
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=1.1e-50 Score=376.70 Aligned_cols=242 Identities=21% Similarity=0.251 Sum_probs=197.5
Q ss_pred CCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCcccc
Q 016353 43 RPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGVNTT 122 (391)
Q Consensus 43 ~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~~~~ 122 (391)
.|++|||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|++.
T Consensus 2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~-------------------- 61 (250)
T 3ks6_A 2 MTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTDMT-------------------- 61 (250)
T ss_dssp CCEEEEETTTHHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBSCC--------------------
T ss_pred CceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCCccccccCCC--------------------
Confidence 489999999999999999999999999999999999999999999999999999999987
Q ss_pred cceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHHHHH
Q 016353 123 GFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFEDKFV 202 (391)
Q Consensus 123 g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~v~ 202 (391)
| .|.++||+||++++++.+ .+ ++||||+|+|+.+++. .+.++||||.+.... ....+++.++
T Consensus 62 g-~v~~~t~~el~~l~~~~~--------~~-~~iptL~evl~~~~~~--~~~l~iEiK~~~~~~------~~~~~~~~v~ 123 (250)
T 3ks6_A 62 G-AIVDMTLAKVKTATIRYG--------AG-SHPMTLEELCALYVDS--HVNFRCEIKPGVDGL------PYEGFVALVI 123 (250)
T ss_dssp S-BGGGSCHHHHHHCCBTTS--------TT-CCCEEHHHHHHHHTTC--SCEEEEEECCCTTSC------CCTTHHHHHH
T ss_pred C-eeecCcHHHHhcCCCCCC--------CC-ccCcCHHHHHHHHhcc--CcEEEEEeCCCcccC------cchHHHHHHH
Confidence 4 799999999999999854 23 6999999999999743 489999999853210 1246899999
Q ss_pred HHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceEEEEecccccccccccccccccchHHHHHHHhhhhhc
Q 016353 203 DTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYIKEYCVGI 282 (391)
Q Consensus 203 ~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i 282 (391)
++++++++. ++++++||++..|+++++..|...++++..... ....+..+..++...
T Consensus 124 ~~l~~~~~~----------~~v~~~SF~~~~l~~~~~~~p~~~~~l~~~~~~-------------~~~~~~~~~~~~~~~ 180 (250)
T 3ks6_A 124 AGLERHSML----------ERTTFSSFLLASMDELWKATTRPRLWLVSPSVL-------------QQLGPGAVIETAIAH 180 (250)
T ss_dssp HHHHHTTCG----------GGEEEEESCHHHHHHHHHHCCSCEEEEECHHHH-------------HHHHHHHHHHHHHHT
T ss_pred HHHHhcCCC----------CCEEEEeCCHHHHHHHHHHCCCCcEEEEecccc-------------cccchhHHHHHHHhc
Confidence 999999876 589999999999999999998766655432100 000111222333333
Q ss_pred CCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhHHHHH
Q 016353 283 GPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSLHNYQ 362 (391)
Q Consensus 283 ~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l~~~~ 362 (391)
++ ..+.+ ++..+++++++.+|++|++|++||||+++++ +++.++||||||||+|+.+++++
T Consensus 181 ~~--~~~~~---~~~~~~~~~v~~~~~~G~~V~~WTvn~~~~~--------------~~l~~~GVDgIiTD~P~~~~~~~ 241 (250)
T 3ks6_A 181 SI--HEIGV---HIDTADAGLMAQVQAAGLDFGCWAAHTPSQI--------------TKALDLGVKVFTTDRPTLAIALR 241 (250)
T ss_dssp TC--CEEEE---EGGGCCHHHHHHHHHTTCEEEEECCCSHHHH--------------HHHHHHTCSEEEESCHHHHHHHH
T ss_pred CC--CEEec---chhhCCHHHHHHHHHCCCEEEEEeCCCHHHH--------------HHHHHcCCCEEEcCCHHHHHHHH
Confidence 33 23333 3556799999999999999999999999998 57999999999999999999987
Q ss_pred hc
Q 016353 363 EL 364 (391)
Q Consensus 363 ~~ 364 (391)
+.
T Consensus 242 ~~ 243 (250)
T 3ks6_A 242 TE 243 (250)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 6
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=2.3e-50 Score=374.10 Aligned_cols=240 Identities=21% Similarity=0.203 Sum_probs=193.0
Q ss_pred CCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCccc
Q 016353 42 SRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGVNT 121 (391)
Q Consensus 42 ~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~~~ 121 (391)
+.|.+|||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|++.
T Consensus 5 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~~~------------------- 65 (247)
T 2otd_A 5 PYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNGW------------------- 65 (247)
T ss_dssp CCCSEEETTTTTTSSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSSCC-------------------
T ss_pred CCCeEEECCCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCccccCCCC-------------------
Confidence 3488999999999999999999999999999999999999999999999999999999987
Q ss_pred ccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHHHH
Q 016353 122 TGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFEDKF 201 (391)
Q Consensus 122 ~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~v 201 (391)
| .|.++||+||++++++.||. +.|.+ ++||||+|+|+.+++. .+.++||+|.+... ...+++.+
T Consensus 66 -g-~v~~~t~~eL~~l~~g~~~~---~~~~~-~~iptL~evl~~~~~~--~~~l~iEiK~~~~~--------~~~~~~~v 129 (247)
T 2otd_A 66 -G-VAGELNWQDLLRVDAGSWYS---KAFKG-EPLPLLSQVAERCREH--GMMANIEIKPTTGT--------GPLTGKMV 129 (247)
T ss_dssp -S-BGGGSCHHHHTTCCSSTTTC---GGGTT-CCCCBHHHHHHHHHHT--TCEEEEEECCCTTC--------HHHHHHHH
T ss_pred -c-cHhhCcHHHHhhCCCCCccC---CCCCC-CcCCCHHHHHHHHHhc--CCEEEEEECCCCCc--------chHHHHHH
Confidence 5 79999999999999998763 34555 5999999999999753 38899999986421 12467889
Q ss_pred HHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCce-EEEEecccccccccccccccccchHHHHHHHhhhh
Q 016353 202 VDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPK-IFLIDDVDILTEDTNQSYSEITSDAYLNYIKEYCV 280 (391)
Q Consensus 202 ~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 280 (391)
+++++++.... ++++++||++..|..+++..|... .+++.... ......+..
T Consensus 130 ~~~l~~~~~~~---------~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~---------------~~~~~~~~~--- 182 (247)
T 2otd_A 130 ALAARQLWAGM---------TPPLLSSFEIDALEAAQQAAPELPRGLLLDEWR---------------DDWRELTAR--- 182 (247)
T ss_dssp HHHHHHHTTTS---------CCCEEEESCHHHHHHHHHHCTTSCEEEEESSCC---------------TTHHHHHHH---
T ss_pred HHHHHHHhcCc---------CCEEEEcCCHHHHHHHHHHCCCCCEEEEecCCc---------------ccHHHHHHH---
Confidence 99999873111 379999999999999999988644 45543210 001111211
Q ss_pred hcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhHHH
Q 016353 281 GIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSLHN 360 (391)
Q Consensus 281 ~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l~~ 360 (391)
+++ ..+.+ ++..+++++++.+|++|+.|++||+|+++++ +++.++||||||||+|+.+.+
T Consensus 183 -~~~--~~i~~---~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~--------------~~l~~~GvdgI~TD~p~~~~~ 242 (247)
T 2otd_A 183 -LGC--VSIHL---NHKLLDKARVMQLKDAGLRILVYTVNKPQHA--------------AELLRWGVDCICTDAIDVIGP 242 (247)
T ss_dssp -HTC--SEEEE---EGGGCCHHHHHHHHHTTCEEEEECCCCHHHH--------------HHHHHHTCSEEEESCTTTSCT
T ss_pred -cCC--eEEec---ChHhCCHHHHHHHHHCCCEEEEEccCCHHHH--------------HHHHHcCCCEEEeCCHHHHHH
Confidence 221 23333 3455689999999999999999999999988 579999999999999999987
Q ss_pred HHh
Q 016353 361 YQE 363 (391)
Q Consensus 361 ~~~ 363 (391)
+++
T Consensus 243 ~l~ 245 (247)
T 2otd_A 243 NFT 245 (247)
T ss_dssp TCC
T ss_pred HHh
Confidence 765
No 7
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.2e-49 Score=374.56 Aligned_cols=258 Identities=22% Similarity=0.329 Sum_probs=194.9
Q ss_pred CCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccc----cccCCcccccccccccccc
Q 016353 42 SRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDT----TNIADHKEFADRKRTCMVQ 117 (391)
Q Consensus 42 ~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~----t~~~~~~~~~~~~~~~~~~ 117 (391)
..+.+|||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+++|+ +++... .
T Consensus 7 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~------------~ 74 (272)
T 3ch0_A 7 ASFDIQGHRGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDV------------T 74 (272)
T ss_dssp TTCEEEETTTTTTTSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEEC------------C
T ss_pred ccccEEecCCCCCCCCcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCccc------------c
Confidence 357899999999999999999999999999999999999999999999999999994 443210 0
Q ss_pred CcccccceecccCHHHHcccccccccc--CCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcc
Q 016353 118 GVNTTGFFVVDFTLEELKTLRAKQRYS--FRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGK 195 (391)
Q Consensus 118 g~~~~g~~v~dlt~~EL~~l~~~~~~~--~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 195 (391)
+....++.|.++||+||++++++.|+. |+++... ..+||||+|+|+++++++..+.++||||.+.... ...++...
T Consensus 75 ~~~~~~~~v~d~t~~eL~~l~~~~~~~~~~~~~~~~-~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~ 152 (272)
T 3ch0_A 75 EANEKNFNLYAMNYADIKEIDVGMKTHPRFKSQKKV-PAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGD-NIDHPNIA 152 (272)
T ss_dssp TTTGGGSBGGGSCHHHHTTSCCSSSCCTTCTTSCCC-CCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGB-TTTBCCHH
T ss_pred cccccCceeecCCHHHHHhcCCCCccCccCcccccC-CCCCcCHHHHHHHHHHhCCCceEEEEECCCcCcc-cccCccHH
Confidence 001112379999999999999998763 2222111 1389999999999987544589999999865321 00111234
Q ss_pred cHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceE-EEEecccccccccccccccccchHHHHH
Q 016353 196 KFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKI-FLIDDVDILTEDTNQSYSEITSDAYLNY 274 (391)
Q Consensus 196 ~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
.+++.++++++++++. ++++|+||++..|++++++.|...+ +++.... . ...
T Consensus 153 ~~~~~v~~~l~~~~~~----------~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~-----------~-----~~~- 205 (272)
T 3ch0_A 153 LFCDLVVAEIKKAHIT----------DRFTLQSFDVRALEYMHSQYPDIKLSYLVETKG-----------T-----LKK- 205 (272)
T ss_dssp HHHHHHHHHHHHTTCG----------GGEEEEESCHHHHHHHHHHCTTSEEEEEECSSC-----------C-----HHH-
T ss_pred HHHHHHHHHHHHcCCC----------CcEEEEeCCHHHHHHHHHHCCCCcEEEEecCCC-----------C-----HHH-
Confidence 5789999999999876 5899999999999999999886544 5543210 0 011
Q ss_pred HHhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCC
Q 016353 275 IKEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDF 354 (391)
Q Consensus 275 i~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~ 354 (391)
++..++...+.+.+ ++..+++++++.+|++|+.|++||||+++++ +++.++||||||||+
T Consensus 206 ---~~~~~~~~~~~i~~---~~~~~~~~~v~~~~~~Gl~v~~wTvn~~~~~--------------~~l~~~GvdgIiTD~ 265 (272)
T 3ch0_A 206 ---QLEKLSFTPAVYSP---DVTLVSKKDIDAAHKLGMRVIPWTVNTKEEI--------------ETLISLGVDGIITDY 265 (272)
T ss_dssp ---HHTTSSSCCSEEEE---BGGGCCHHHHHHHHHTTCEECCBCCCSHHHH--------------HHHHHHTCSEEEESC
T ss_pred ---HHHHcCCCCcEEcc---chhhcCHHHHHHHHHcCCEEEEeccCCHHHH--------------HHHHHcCCCEEEeCC
Confidence 11222222234444 3456689999999999999999999999988 579999999999999
Q ss_pred chhHHH
Q 016353 355 PGSLHN 360 (391)
Q Consensus 355 P~~l~~ 360 (391)
|+.+++
T Consensus 266 P~~~~~ 271 (272)
T 3ch0_A 266 PDLFFE 271 (272)
T ss_dssp GGGGTC
T ss_pred HHHHhh
Confidence 998754
No 8
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=7.4e-49 Score=366.33 Aligned_cols=241 Identities=20% Similarity=0.242 Sum_probs=194.7
Q ss_pred CCCCEEEecCCCC--CCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCC---CcccccccCCcccccccccccc
Q 016353 41 TSRPYNLAHRGSN--GEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDV---FLDDTTNIADHKEFADRKRTCM 115 (391)
Q Consensus 41 ~~~p~iiaHRG~~--~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~---~l~r~t~~~~~~~~~~~~~~~~ 115 (391)
.++|++|||||++ +.+||||++||++|++.|+++||+|||+||||++||+||. +++|+|++.
T Consensus 4 ~~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~------------- 70 (258)
T 2o55_A 4 VIIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDGT------------- 70 (258)
T ss_dssp CCCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTTT-------------
T ss_pred ccCceEEECCCCCCCCCCCccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCCCC-------------
Confidence 4668999999999 8999999999999999999999999999999999999999 999999976
Q ss_pred ccCcccccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcc
Q 016353 116 VQGVNTTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGK 195 (391)
Q Consensus 116 ~~g~~~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 195 (391)
| .|.++||+||++++++ . .++||||+|+|+++++.+..+.++||+|.+.... ...
T Consensus 71 -------g-~v~~~t~~eL~~l~~~----------~-~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~------~~~ 125 (258)
T 2o55_A 71 -------S-RIGDLSLEELKRLDVG----------G-GHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKR------KES 125 (258)
T ss_dssp -------C-BGGGSCHHHHTTCBSS----------S-SCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSS------TTS
T ss_pred -------e-ehhhCcHHHHhhcCCC----------C-CCccCCHHHHHHHhhhhcCceEEEEEEccCCccc------cch
Confidence 4 7999999999999986 2 2699999999999987533589999999854210 124
Q ss_pred cHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceE-EEE-ecccccccccccccccccchHHHH
Q 016353 196 KFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKI-FLI-DDVDILTEDTNQSYSEITSDAYLN 273 (391)
Q Consensus 196 ~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 273 (391)
.+++.++++++++++. ++++++||++..|..++++.|...+ +++ ..... + . + ..+.
T Consensus 126 ~~~~~v~~~l~~~~~~----------~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~---~-~--~------~~~~ 183 (258)
T 2o55_A 126 GDHQRLLLLVEKYHMQ----------ERVDYCSFHHEALAHLKALCPDVKITYLFNYMGQP---T-P--L------DFVE 183 (258)
T ss_dssp SHHHHHHHHHHTTTCG----------GGEEEEESSHHHHHHHHHHCTTCEEEEECCTTSCC---C-C--T------THHH
T ss_pred HHHHHHHHHHHHcCCC----------CCEEEEeCCHHHHHHHHHHCCCCcEEEEEeCCCCC---C-H--H------HHHH
Confidence 6889999999999876 5899999999999999999886555 444 22100 0 0 0 1111
Q ss_pred HHHhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEee----cCcccccccccCCCchHHHHHHHHHcCccE
Q 016353 274 YIKEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTY----RNEHQFLHFNFLQDPYREYDYWINKIGVDG 349 (391)
Q Consensus 274 ~i~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTv----n~~~~~~~~~~~~~~~~~~~~~l~~~GVdg 349 (391)
... ..++ ..+.+ ++..+++++++.+|++|+.|++||+ |+++.+ +++.++||||
T Consensus 184 ~~~----~~~~--~~v~~---~~~~~~~~~v~~~~~~G~~v~~wTv~~~~n~~~~~--------------~~l~~~Gvdg 240 (258)
T 2o55_A 184 QAC----YGDA--NGVSM---LFHYLTKEQVCTAHEKGLSVTVWMPWIFDDSEEDW--------------KKCLELQVDL 240 (258)
T ss_dssp HHH----HTTC--SEEEE---EGGGCCHHHHHHHHHTTCEEEEECCTTCCCCHHHH--------------HHHHHHTCSE
T ss_pred HHH----hcCC--eEEec---ChhhcCHHHHHHHHHCCCEEEEeeCCCCCCCHHHH--------------HHHHHcCCCE
Confidence 111 1222 23333 3455689999999999999999999 999888 5789999999
Q ss_pred EEeCCchhHHHHHhc
Q 016353 350 LFTDFPGSLHNYQEL 364 (391)
Q Consensus 350 IiTD~P~~l~~~~~~ 364 (391)
||||+|+.+.++++.
T Consensus 241 I~TD~p~~~~~~l~~ 255 (258)
T 2o55_A 241 ICSNYPFGLMNFLSN 255 (258)
T ss_dssp EEESCHHHHHHHHTC
T ss_pred EEeCCHHHHHHHHHH
Confidence 999999999999873
No 9
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=1e-48 Score=375.17 Aligned_cols=276 Identities=20% Similarity=0.302 Sum_probs=200.9
Q ss_pred CCCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCcc
Q 016353 41 TSRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGVN 120 (391)
Q Consensus 41 ~~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~~ 120 (391)
...+.+|||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+|+|+|+.+. +|..
T Consensus 15 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~-------------~G~~ 81 (313)
T 3l12_A 15 PSVVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMTRDG-------------QGHW 81 (313)
T ss_dssp TTBCEEEEETTTTTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTCBCT-------------TSCB
T ss_pred CCCeEEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCchhcccccccC-------------CCcc
Confidence 345889999999999999999999999999999999999999999999999999999964321 1110
Q ss_pred c--ccceecccCHHHHcccccccccc-------CCcc-ccCCCccccCHHHHHHHHHhcC-CceeEEEeecCchhccccc
Q 016353 121 T--TGFFVVDFTLEELKTLRAKQRYS-------FRDQ-QYNGKFPIITFEEYISIALDAQ-RVVGIYPEMKNPVFINQHV 189 (391)
Q Consensus 121 ~--~g~~v~dlt~~EL~~l~~~~~~~-------~r~~-~~~~~~~ipTLeEvL~~~~~~~-~~~~l~iEiK~~~~~~~~~ 189 (391)
. .+..|.++||+||++|+++.+.+ |+++ .+.+ ++||||+|+|+.++..+ +.+.++||||.+......
T Consensus 82 ~~~~~~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~~g-~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~~~~~- 159 (313)
T 3l12_A 82 LTGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTG-IHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHD- 159 (313)
T ss_dssp CCSSCCBGGGSCHHHHHTSBCSSCCTTSHHHHHSTTSCCCSS-CCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTC-
T ss_pred cCCCCcchhcCcHHHHhhCCCCCccccccccccCccccccCC-CcCCCHHHHHHHHHhcCCCCceEEEEEccCCccccc-
Confidence 0 01279999999999999986211 1211 1233 69999999999998632 258999999986532100
Q ss_pred cccCcccHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCc-eEEEEecccccc-------ccccc
Q 016353 190 KWADGKKFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSP-KIFLIDDVDILT-------EDTNQ 261 (391)
Q Consensus 190 ~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~-~~~l~~~~~~~~-------~~~~~ 261 (391)
.+....++++++++++++++. ++++++||++..|++++++.|.. ..+++....... .....
T Consensus 160 -~~~~~~~~~~v~~~l~~~~~~----------~~v~i~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~ 228 (313)
T 3l12_A 160 -HAARAEMVAAVLADVRRYRME----------PRTVMHSFDWALLGECRRQAPDLPTSYLSQLPENADDPGEDSAKPVGP 228 (313)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCG----------GGEEEEESCHHHHHHHHHHCTTSCEEEEECCCC-------------CC
T ss_pred -cccHHHHHHHHHHHHHHcCCC----------CCEEEEcCCHHHHHHHHHHCCCCcEEEEeccccccccccccccccccc
Confidence 001146899999999999986 58999999999999999998864 455554321000 00000
Q ss_pred ccccccchHHHHHHHhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHH
Q 016353 262 SYSEITSDAYLNYIKEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYW 341 (391)
Q Consensus 262 ~~~~~~~~~~~~~i~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~ 341 (391)
.+..+.. .....+. .+++ ..+.+ ++..+++++|+.+|++|++|++||||+++++ ++
T Consensus 229 ~~~~~~~-~l~~~~~----~~~~--~~~~~---~~~~~~~~~v~~~~~~Gl~V~~WTVn~~~~~--------------~~ 284 (313)
T 3l12_A 229 DYDRMTE-SLPQAVA----SAGG--QLWCP---YFLDVTPELVAEAHDLGLIVLTWTVNEPEDI--------------RR 284 (313)
T ss_dssp CTTTCCS-CHHHHHH----HHTC--SEEEE---BGGGCCHHHHHHHHHTTCEEEEBCCCSHHHH--------------HH
T ss_pred cchhccc-cHHHHHH----HhCC--cEEec---chhcCCHHHHHHHHHCCCEEEEEcCCCHHHH--------------HH
Confidence 0110000 0111111 1221 23433 3556799999999999999999999999998 68
Q ss_pred HHHcCccEEEeCCchhHHHHHhccC
Q 016353 342 INKIGVDGLFTDFPGSLHNYQELTS 366 (391)
Q Consensus 342 l~~~GVdgIiTD~P~~l~~~~~~~~ 366 (391)
+.++||||||||+|+.++++++.+.
T Consensus 285 l~~~GVDgIiTD~P~~~~~~l~~~g 309 (313)
T 3l12_A 285 MATTGVDGIVTDYPGRTQRILIDMG 309 (313)
T ss_dssp HHHHTCSEEEESCHHHHHHHHHHTT
T ss_pred HHHcCCCEEEeCCHHHHHHHHHhcC
Confidence 9999999999999999999987553
No 10
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=4.1e-48 Score=366.30 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=198.1
Q ss_pred CCCCCCCCEEEecCCCCC-CCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCcccccccccccc
Q 016353 37 QPLQTSRPYNLAHRGSNG-EFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCM 115 (391)
Q Consensus 37 ~~~~~~~p~iiaHRG~~~-~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~ 115 (391)
.......|++|||||+++ .+||||++||+.|++.|+++||+|||+||||++||+||.+++|+|++.
T Consensus 25 ~~~~~~~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~~------------- 91 (292)
T 3mz2_A 25 QYADDRIPLISGHRGGRGKGYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTLERTSNGT------------- 91 (292)
T ss_dssp BCCTTCCCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSSSSTTTBSCC-------------
T ss_pred hCCCCCCCEEEECCCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCchhcccCCCC-------------
Confidence 344567899999999975 799999999999999999999999999999999999999999999986
Q ss_pred ccCcccccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcc
Q 016353 116 VQGVNTTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGK 195 (391)
Q Consensus 116 ~~g~~~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~ 195 (391)
| .|.++||+||++++++.+++ .+.+ ++||||+|+|++++. .+.++||+|...
T Consensus 92 -------g-~v~~~t~~el~~l~~~~~~~----~~~~-~~iptL~evl~~~~~---~~~l~iE~K~~~------------ 143 (292)
T 3mz2_A 92 -------G-KVSDYTWEELQNFRLKDPEG----NITN-YRIPTLEEAIRWARG---KTILILDKKDVP------------ 143 (292)
T ss_dssp -------S-CGGGSCHHHHTTSCBBCTTC----CBCS-CCCCBHHHHHHHHTT---TCCEEECCSSSC------------
T ss_pred -------C-chhhCcHHHHhcCCCCCCCC----ccCC-cCCCCHHHHHHHhCC---CcEEEEEECCCc------------
Confidence 4 79999999999999986531 2333 599999999999863 478999999742
Q ss_pred cHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceEEEEecccccccccccccccccchHHHHHH
Q 016353 196 KFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYI 275 (391)
Q Consensus 196 ~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 275 (391)
.+.++++++++++. ++++++||++..++++++..|...+.++... ...+..+
T Consensus 144 --~~~v~~~l~~~~~~----------~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~----------------~~~l~~~ 195 (292)
T 3mz2_A 144 --MERTAQLITDMQAE----------PYVMITVHDGASARFFYEKNPNFMFEAFVKT----------------KEAVQDY 195 (292)
T ss_dssp --HHHHHHHHHHTTCT----------TTEEEEESSHHHHHHHHHHCTTCCEEEECCS----------------HHHHHHH
T ss_pred --HHHHHHHHHHcCCC----------CCEEEEECCHHHHHHHHHHCCCCeEEEEeCC----------------HHHHHHH
Confidence 37899999999986 5899999999999999999886554333211 1112222
Q ss_pred HhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCc
Q 016353 276 KEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 276 ~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
.. .++ ++...+......+...++++|+.+|++|+.|++||+|+.+.... ..++.+++ .+++++||||||||+|
T Consensus 196 ~~--~g~-~~~~~~~~~~~~~~~~~~~~V~~ah~~G~~V~vWTv~t~d~~~~---~~~~~~~~-~~L~~~GVDgIiTD~P 268 (292)
T 3mz2_A 196 ED--NGI-PWSHIMAYVGPKITPEVREVIDMLHERGVMCMISTAPSDDKLST---PESRAEAY-RMIIRQGVDIIESDRP 268 (292)
T ss_dssp HH--TTC-CGGGEEEEEESSCCHHHHHHHHHHHHTTBCEEEECTTTGGGSSS---HHHHHHHH-HHHHHTTCCEEEESCH
T ss_pred HH--hCC-ChhheeeeecccccccCHHHHHHHHHCCCEEEEEeCCCcchhhh---ccccHHHH-HHHHHcCCCEEEeCCH
Confidence 11 111 11111111122445567899999999999999999998763210 00112233 4689999999999999
Q ss_pred hhHHHHHhccCCCCCCchHHHHH
Q 016353 356 GSLHNYQELTSPVSKDNRASKLL 378 (391)
Q Consensus 356 ~~l~~~~~~~~~~~~~~~~~~~~ 378 (391)
+.+.++++...+ ..+..|+.+
T Consensus 269 ~~l~~~L~~~~~--~~~~~~~~~ 289 (292)
T 3mz2_A 269 IEVAEAISSLIP--VSSSKGKFF 289 (292)
T ss_dssp HHHHHHHGGGSC--SSCTTGGGE
T ss_pred HHHHHHHHHhcc--Ccchhhhhh
Confidence 999999886543 335555443
No 11
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=4.6e-50 Score=372.15 Aligned_cols=231 Identities=21% Similarity=0.146 Sum_probs=189.4
Q ss_pred CEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCccccc
Q 016353 44 PYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGVNTTG 123 (391)
Q Consensus 44 p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~~~~g 123 (391)
|+||||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|++. |
T Consensus 2 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~~~--------------------g 61 (248)
T 1zcc_A 2 TKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTNGT--------------------G 61 (248)
T ss_dssp CEEEETTTTTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSCC--------------------S
T ss_pred CeEEECCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCccccccCCC--------------------c
Confidence 68999999999999999999999999999999999999999999999999999999986 4
Q ss_pred ceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHHHHHH
Q 016353 124 FFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFEDKFVD 203 (391)
Q Consensus 124 ~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~v~~ 203 (391)
.|.++||+||++++++.+ .+||||+|+|+++++. .+.++||||.+... ...+++.+++
T Consensus 62 -~v~~~t~~eL~~l~~g~~-----------~~iptL~evl~~~~~~--~~~l~iEiK~~~~~--------~~~~~~~v~~ 119 (248)
T 1zcc_A 62 -PVGHMLSSEIDTLDAGGW-----------FDDRFKGAIVPRLDAY--LEHLRGRAGVYIEL--------KYCDPAKVAA 119 (248)
T ss_dssp -BSTTSCHHHHTTSCSSTT-----------TCGGGTTCCCCBHHHH--HHHHTTTCEEEEEE--------EESCHHHHHH
T ss_pred -chhhCCHHHHHhCCCCCC-----------CCCCCHHHHHHHHHhc--CcEEEEEeCCCCCc--------ccHHHHHHHH
Confidence 699999999999998743 4899999999999753 37899999975420 1126899999
Q ss_pred HHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceEEEEecccccccccccccccccchHHHHHHHhhhhhcC
Q 016353 204 TLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYIKEYCVGIG 283 (391)
Q Consensus 204 ~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~ 283 (391)
+++++++. ++++++||++..+.++++..|...+.++..... . ..... ...+
T Consensus 120 ~l~~~~~~----------~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~----------~-----~~~~~----~~~~ 170 (248)
T 1zcc_A 120 LVRHLGMV----------RDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAK----------S-----PSLVG----AVHH 170 (248)
T ss_dssp HHHHHTCS----------TTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHS----------S-----THHHH----HTTC
T ss_pred HHHHhCCC----------CCEEEEECCHHHHHHHHHHCCCCcEEEEecCCc----------c-----HHHHH----HHcC
Confidence 99999876 589999999999999999988655543322100 0 01111 1122
Q ss_pred CCcceeeecCCCCCCC-CHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHH-HHHcCccEEEeCCchhHHHH
Q 016353 284 PWKDTVVPVANNYSQT-PTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYW-INKIGVDGLFTDFPGSLHNY 361 (391)
Q Consensus 284 ~~~~~l~~~~~~~~~~-~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~-l~~~GVdgIiTD~P~~l~~~ 361 (391)
+ +.+.+ ++..+ ++++++.+|++|+.|++||+|+++++ ++ +.++||||||||+|+.+.++
T Consensus 171 ~--~~i~~---~~~~~~~~~~v~~~~~~G~~v~~wTvn~~~~~--------------~~~l~~~GvdgIiTD~p~~~~~~ 231 (248)
T 1zcc_A 171 A--SIIEI---TPAQMRRPGIIEASRKAGLEIMVYYGGDDMAV--------------HREIATSDVDYINLDRPDLFAAV 231 (248)
T ss_dssp C--SEEEE---CHHHHHSHHHHHHHHHHTCEEEEECCCCCHHH--------------HHHHHHSSCSEEEESCHHHHHHH
T ss_pred C--CEEEe---cHHHhCCHHHHHHHHHCCCEEEEECCCCHHHH--------------HHHHHHcCCCEEEECCHHHHHHH
Confidence 2 23333 34456 89999999999999999999999988 57 89999999999999999998
Q ss_pred Hhc
Q 016353 362 QEL 364 (391)
Q Consensus 362 ~~~ 364 (391)
++.
T Consensus 232 ~~~ 234 (248)
T 1zcc_A 232 RSG 234 (248)
T ss_dssp HHH
T ss_pred HHH
Confidence 873
No 12
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=3.5e-48 Score=357.19 Aligned_cols=233 Identities=20% Similarity=0.202 Sum_probs=186.1
Q ss_pred CCCEEEecCCC--CCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCc
Q 016353 42 SRPYNLAHRGS--NGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGV 119 (391)
Q Consensus 42 ~~p~iiaHRG~--~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~ 119 (391)
.+|.+|||||+ ++.+||||++||+.|++.|+++||+|||+||||++||+||.+++| +
T Consensus 3 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~---~------------------ 61 (238)
T 3no3_A 3 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG---K------------------ 61 (238)
T ss_dssp CCCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETT---E------------------
T ss_pred CCCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCC---C------------------
Confidence 46899999999 578999999999999999999999999999999999999999986 1
Q ss_pred ccccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHH
Q 016353 120 NTTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFED 199 (391)
Q Consensus 120 ~~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~ 199 (391)
.|.++||+||++++++. + ++||||+|+|+++++.+ .+.++||||.+.... ....+++
T Consensus 62 -----~v~~~t~~el~~l~~~~----------~-~~iptL~evl~~~~~~~-~~~l~iEiK~~~~~~------~~~~~~~ 118 (238)
T 3no3_A 62 -----HIQSCTYDELKDLQLSN----------G-EKLPTLEQYLKRAKKLK-NIRLIFELKSHDTPE------RNRDAAR 118 (238)
T ss_dssp -----EGGGSCHHHHTTCBCTT----------S-CBCCBHHHHHHHHHHCT-TCEEEEEECCCSSHH------HHHHHHH
T ss_pred -----ChHhCCHHHHhhCCCCC----------C-CcCCcHHHHHHHHhhcC-CceEEEEeCCCCCcc------hhHHHHH
Confidence 59999999999999862 3 69999999999998753 489999999864210 1235889
Q ss_pred HHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceEEEEecccccccccccccccccchHHHHHHHhhh
Q 016353 200 KFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYIKEYC 279 (391)
Q Consensus 200 ~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 279 (391)
.++++++++++. ++++++||++..|.+++++.|...+.++... . .. ..+..
T Consensus 119 ~v~~~l~~~~~~----------~~v~~~Sf~~~~l~~~~~~~p~~~~~~l~~~-~-------------~~---~~~~~-- 169 (238)
T 3no3_A 119 LSVQMVKRMKLA----------KRTDYISFNMDACKEFIRLCPKSEVSYLNGE-L-------------SP---MELKE-- 169 (238)
T ss_dssp HHHHHHHHTTCG----------GGEEEEESCHHHHHHHHHHCTTSCEEECSSC-S-------------CH---HHHHH--
T ss_pred HHHHHHHHcCCc----------CCEEEEECCHHHHHHHHHHCCCCeEEEEeCC-C-------------CH---HHHHH--
Confidence 999999999886 5899999999999999999987555443221 0 01 11111
Q ss_pred hhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhHH
Q 016353 280 VGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSLH 359 (391)
Q Consensus 280 ~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l~ 359 (391)
.+. ..+.+. ......++++++.+|++|+.|++||||+++.+ +++.++||||||||+|+.++
T Consensus 170 --~~~--~~~~~~-~~~~~~~~~~v~~~~~~G~~v~~WTVn~~~~~--------------~~l~~~GVdgIiTD~P~~~~ 230 (238)
T 3no3_A 170 --LGF--TGLDYH-YKVLQSHPDWVKDCKVLGMTSNVWTVDDPKLM--------------EEMIDMGVDFITTDLPEETQ 230 (238)
T ss_dssp --TTC--CEEEEE-HHHHHHSTTHHHHHHHTTCEEEEECCCSHHHH--------------HHHHHHTCSEEEESCHHHHH
T ss_pred --CCC--ceEecc-HHhhhCCHHHHHHHHHCCCEEEEECCCCHHHH--------------HHHHHcCCCEEECCCHHHHH
Confidence 111 112111 00112368899999999999999999999998 58999999999999999999
Q ss_pred HHHhccC
Q 016353 360 NYQELTS 366 (391)
Q Consensus 360 ~~~~~~~ 366 (391)
++++.+.
T Consensus 231 ~~l~~r~ 237 (238)
T 3no3_A 231 KILHSRA 237 (238)
T ss_dssp HHHHHHT
T ss_pred HHHHhcc
Confidence 9988653
No 13
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=9.6e-47 Score=344.67 Aligned_cols=218 Identities=23% Similarity=0.327 Sum_probs=176.2
Q ss_pred CCCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCcc
Q 016353 41 TSRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGVN 120 (391)
Q Consensus 41 ~~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~~ 120 (391)
..+|.+|||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++ .
T Consensus 5 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~-----~------------------ 61 (224)
T 1vd6_A 5 RQRPLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP-----L------------------ 61 (224)
T ss_dssp --CCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET-----T------------------
T ss_pred CCCceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC-----C------------------
Confidence 45689999999999999999999999999999999999999999999999999997 1
Q ss_pred cccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHHH
Q 016353 121 TTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFEDK 200 (391)
Q Consensus 121 ~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~ 200 (391)
| .|.++||+||++++ ++||||+|+|+++++ +..+.++||+|.+... ...+++.
T Consensus 62 --g-~v~~~t~~eL~~l~---------------~~iptL~evl~~~~~-~~~~~l~iEiK~~~~~--------~~~~~~~ 114 (224)
T 1vd6_A 62 --G-PVFQVDYADLKAQE---------------PDLPRLEEVLALKEA-FPQAVFNVELKSFPGL--------GEEAARR 114 (224)
T ss_dssp --E-EGGGSCHHHHHHHS---------------TTCCBHHHHHGGGGT-CTTCEEEEEECCCTTS--------HHHHHHH
T ss_pred --C-ChhhCCHHHHHhcC---------------CCCCCHHHHHHhhhc-cCCceEEEEECCCCCc--------cHHHHHH
Confidence 3 69999999999986 389999999999972 1348999999986421 1246788
Q ss_pred HHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCce-EEEEecccccccccccccccccchHHHHHHHhhh
Q 016353 201 FVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPK-IFLIDDVDILTEDTNQSYSEITSDAYLNYIKEYC 279 (391)
Q Consensus 201 v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 279 (391)
+++++++ . ++++++||++..+.++++..|... .+++.... ..++
T Consensus 115 v~~~l~~---~----------~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~----------------------~~~~ 159 (224)
T 1vd6_A 115 LAALLRG---R----------EGVWVSSFDPLALLALRKAAPGLPLGFLMAEDH----------------------SALL 159 (224)
T ss_dssp HHHHTTT---C----------SSEEEEESCHHHHHHHHHHCTTSCEEEEESSCC----------------------GGGG
T ss_pred HHHHHhc---C----------CcEEEEeCCHHHHHHHHHHCCCCCEEEEecccc----------------------HHHH
Confidence 8888887 2 589999999999999999988644 45543210 0111
Q ss_pred hhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhHH
Q 016353 280 VGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSLH 359 (391)
Q Consensus 280 ~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l~ 359 (391)
..+++ ..+.+ ++..+++++++.+|++|+.|++||+|+++++ +++.++||||||||+|+.+.
T Consensus 160 ~~~~~--~~i~~---~~~~~~~~~v~~~~~~G~~v~~wtvn~~~~~--------------~~l~~~GvdgI~TD~p~~~~ 220 (224)
T 1vd6_A 160 PCLGV--EAVHP---HHALVTEEAVAGWRKRGLFVVAWTVNEEGEA--------------RRLLALGLDGLIGDRPEVLL 220 (224)
T ss_dssp GGSCC--SEEEE---BGGGCCHHHHHHHHHTTCEEEEECCCCHHHH--------------HHHHHTTCSEEEESCHHHHT
T ss_pred HHcCC--cEEec---CcccCCHHHHHHHHHCCCEEEEEeCCCHHHH--------------HHHHhcCCCEEEcCCHHHHH
Confidence 12222 23333 3455689999999999999999999999988 57999999999999999987
Q ss_pred HHH
Q 016353 360 NYQ 362 (391)
Q Consensus 360 ~~~ 362 (391)
+++
T Consensus 221 ~~~ 223 (224)
T 1vd6_A 221 PLG 223 (224)
T ss_dssp TSC
T ss_pred Hhc
Confidence 654
No 14
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=2e-46 Score=344.59 Aligned_cols=220 Identities=25% Similarity=0.345 Sum_probs=175.1
Q ss_pred CCCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCcc
Q 016353 41 TSRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGVN 120 (391)
Q Consensus 41 ~~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~~ 120 (391)
....++|||||+++.+||||++||+.|++.|+|+||+|||+||||++||+||.+++|+|++.
T Consensus 10 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~------------------ 71 (234)
T 1o1z_A 10 HHHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLD------------------ 71 (234)
T ss_dssp CCCCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCEE------------------
T ss_pred cceEEEEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCCcC------------------
Confidence 34578999999999999999999999999999999999999999999999999999999876
Q ss_pred cccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHHH
Q 016353 121 TTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFEDK 200 (391)
Q Consensus 121 ~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~ 200 (391)
| .|.++||+||++++ + ++||||+|+|+.+++ .+.++||+|.+ .+++.
T Consensus 72 --g-~v~d~T~~eL~~l~-------------~-~~iptL~evL~~~~~---~~~l~iEiK~~-------------~~~~~ 118 (234)
T 1o1z_A 72 --V-KIRDATVSELKELT-------------D-GKITTLKEVFENVSD---DKIINIEIKER-------------EAADA 118 (234)
T ss_dssp --E-EGGGSCHHHHHHHT-------------T-TCCCBHHHHHHHSCT---TSEEEEEECCG-------------GGHHH
T ss_pred --c-CcccCcHHHHhcCC-------------C-CCCCCHHHHHHhccc---CCeEEEEeCCc-------------cHHHH
Confidence 5 79999999999987 1 589999999999864 37899999974 35688
Q ss_pred HHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceE-EEEecccccccccccccccccchHHHHHHHhhh
Q 016353 201 FVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKI-FLIDDVDILTEDTNQSYSEITSDAYLNYIKEYC 279 (391)
Q Consensus 201 v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 279 (391)
+++++++ . ++++++||+ ++++++..|...+ +++..... . .+ ......+. +
T Consensus 119 v~~~l~~---~----------~~vii~Sf~---l~~~~~~~p~~~~~~l~~~~~~-----~-~~-----~~~~~~~~--~ 169 (234)
T 1o1z_A 119 VLEISKK---R----------KNLIFSSFD---LDLLDEKFKGTKYGYLIDEENY-----G-SI-----ENFVERVE--K 169 (234)
T ss_dssp HHHHHTT---C----------CSEEEEESC---HHHHHHHCTTSCEEEECCTTTT-----C-SH-----HHHHHHHH--H
T ss_pred HHHHHhc---c----------CCEEEEchh---HHHHHhhCCCCcEEEEeccccc-----c-CH-----HHHHHHcC--C
Confidence 8898887 2 589999999 8899998886544 44432110 0 00 01111111 1
Q ss_pred hhcCCCcceeeecCCCCCCC--C--HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCc
Q 016353 280 VGIGPWKDTVVPVANNYSQT--P--TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 280 ~~i~~~~~~l~~~~~~~~~~--~--~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
. .+ ..+.+ ++..+ + +++++.+|++|+.|++||+|+++++ +++.++ ||||+||+|
T Consensus 170 ~--~~--~~i~~---~~~~~g~~~~~~~v~~~~~~G~~v~~wTvn~~~~~--------------~~l~~~-vdgIiTD~P 227 (234)
T 1o1z_A 170 E--RP--YSLHV---PYQAFELEYAVEVLRSFRKKGIVIFVWTLNDPEIY--------------RKIRRE-IDGVITDEV 227 (234)
T ss_dssp H--CC--SEEEE---EGGGGGSHHHHHHHHHHHHTTCEEEEESCCCHHHH--------------HHHGGG-CSEEEESCH
T ss_pred C--CC--CEEEe---CHHHhcCCccHHHHHHHHHcCCEEEEeCCCCHHHH--------------HHHHHh-CCEEEcCCH
Confidence 0 00 22322 23333 5 8999999999999999999999988 578999 999999999
Q ss_pred hhHHHHH
Q 016353 356 GSLHNYQ 362 (391)
Q Consensus 356 ~~l~~~~ 362 (391)
+.+++|+
T Consensus 228 ~~~~~~~ 234 (234)
T 1o1z_A 228 ELFVKLR 234 (234)
T ss_dssp HHHHHTC
T ss_pred HHHhhcC
Confidence 9998874
No 15
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=7.7e-44 Score=333.87 Aligned_cols=258 Identities=22% Similarity=0.259 Sum_probs=191.2
Q ss_pred CCCCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCc
Q 016353 40 QTSRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGV 119 (391)
Q Consensus 40 ~~~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~ 119 (391)
....|+||||||+++.+||||++||+.|++.|+++||+|||+||||++||+||.+++|+|++.
T Consensus 14 ~~~~~~iiaHRG~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~~~----------------- 76 (278)
T 3i10_A 14 KSNKVLVVAHRGNWRSAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTTGK----------------- 76 (278)
T ss_dssp TCCSCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBSCC-----------------
T ss_pred CCCCCEEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCCCC-----------------
Confidence 355699999999999999999999999999999999999999999999999999999999987
Q ss_pred ccccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHH
Q 016353 120 NTTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFED 199 (391)
Q Consensus 120 ~~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~ 199 (391)
| .|.++||+||++++++.+++ .+.+ ++||||+|+|++++. .+.++||.+. .+++
T Consensus 77 ---g-~v~~~t~~el~~l~~~~~~~----~~~~-~~iptL~evl~~~~~---~~~~nie~~~--------------~~~~ 130 (278)
T 3i10_A 77 ---G-EIKNWTLADIKKLKLKDKDG----KVTN-YVVPTLEEALLTAKG---KIMVNLDKAY--------------DIFD 130 (278)
T ss_dssp ---S-BGGGSCHHHHTTSCBBCTTS----CBCS-CCCCBHHHHHHHHTT---TSEEEEESCG--------------GGHH
T ss_pred ---c-eeecCcHHHHhcCCCCCCCc----ccCC-CCCCCHHHHHHHhcC---CeEEEEecCc--------------hHHH
Confidence 4 79999999999999987653 2233 699999999999963 4788888421 3789
Q ss_pred HHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCc-eEEEEecccccccccccccccccchHHHHHHHhh
Q 016353 200 KFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSP-KIFLIDDVDILTEDTNQSYSEITSDAYLNYIKEY 278 (391)
Q Consensus 200 ~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 278 (391)
.++++++++++. ++++++|+ ..+..+++..|.. ..+++.+. . ....+...+.+..+
T Consensus 131 ~v~~~l~~~~~~----------~~v~i~s~--~~l~~~~~~~p~~~~~~l~~p~-i----------~~~~~~~~~~i~~~ 187 (278)
T 3i10_A 131 DVYAILEKTETQ----------NQVIMKGG--QPIETVKREFGSYLDKVLYMPV-I----------DLGNKEAEKIITDY 187 (278)
T ss_dssp HHHHHHHHHTCG----------GGEEEEES--SCHHHHHHHHGGGTTTSEEEEE-E----------ETTSTTHHHHHHHH
T ss_pred HHHHHHHHcCCC----------CeEEEEEh--HHHHHHHHHCcCCccceEEEee-e----------cccccchHHHHHHH
Confidence 999999999987 58999994 4578888876642 22222110 0 00011123445555
Q ss_pred hhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCCeEEEEeecCccccccccc--CCCchHHHHHHHHHc-CccEEEeCCc
Q 016353 279 CVGIGPWKDTVVPVANNYSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNF--LQDPYREYDYWINKI-GVDGLFTDFP 355 (391)
Q Consensus 279 ~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~--~~~~~~~~~~~l~~~-GVdgIiTD~P 355 (391)
...+.+....+.. .......+++++.+|++|++|++||+...-.....+. ..||.+.|. +++++ |||+|+||+|
T Consensus 188 ~~~~~p~~~~~~~--~~~~~~~~~~v~~~~~~g~~v~~nTlw~~~~~g~~d~~a~~d~~~~~~-~l~~~~Gvd~I~TD~P 264 (278)
T 3i10_A 188 LKELRPAAFEIIY--SDPKNPLPPKIKQLLFKKSLIWYNTLWGSLAGNHDDNLALTDPEKSYG-YLIEQLGARILQTDQP 264 (278)
T ss_dssp HHHTCCSEEEEEB--CCTTCSSHHHHHHHHTTTSEEEEECSSGGGBTTCCHHHHHHCHHHHHH-HHHHTTCEEEEEESCH
T ss_pred HHhcCceEEEEee--cCCccchHHHHHHHHHCCCEEEEEecccccccCccchhhccChHHHHH-HHHhcCCCCEEEeCCH
Confidence 5556654333322 2233445899999999999999999643211100000 015556665 58888 9999999999
Q ss_pred hhHHHHHhccC
Q 016353 356 GSLHNYQELTS 366 (391)
Q Consensus 356 ~~l~~~~~~~~ 366 (391)
+.+.+|++.+.
T Consensus 265 ~~l~~yL~~~~ 275 (278)
T 3i10_A 265 AYLLDYLRKKG 275 (278)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHhhcc
Confidence 99999998654
No 16
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=100.00 E-value=8.1e-37 Score=288.92 Aligned_cols=236 Identities=16% Similarity=0.176 Sum_probs=160.8
Q ss_pred CCCC-EEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCC---cccccccCCccccccccccccc
Q 016353 41 TSRP-YNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVF---LDDTTNIADHKEFADRKRTCMV 116 (391)
Q Consensus 41 ~~~p-~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~---l~r~t~~~~~~~~~~~~~~~~~ 116 (391)
.++| ++|||| |||++||+.|++.|||+||+|||+ |||++||+||.+ ++|+|++.
T Consensus 3 ~~~p~~iiaHr-------ENTl~Af~~A~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~~-------------- 60 (285)
T 1xx1_A 3 NRRPIWNLAHM-------VNAVAQIPDFLDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCIRW-------------- 60 (285)
T ss_dssp CSEEEEEEESC-------CCSTTHHHHHHHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSCCE--------------
T ss_pred CCCCcEEEEeh-------hccHHHHHHHHHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccCCC--------------
Confidence 3457 899999 999999999999999999999999 999999999999 99999986
Q ss_pred cCcccccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCccc
Q 016353 117 QGVNTTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKK 196 (391)
Q Consensus 117 ~g~~~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 196 (391)
| .|.++ ++||++|++ ++. |+|++.|+ .++||||.+....... .+.+..
T Consensus 61 ------g-~v~d~-l~eL~~l~~--~~~------------~~~~~~L~---------~l~iEiK~~~~~~~~~-~~~~~~ 108 (285)
T 1xx1_A 61 ------E-YFNVF-LKTLREYTT--PGN------------AKYRDGFI---------LFVLDLKTGSLSNDQV-RPAGEN 108 (285)
T ss_dssp ------E-EHHHH-HHHHHHHTS--TTC------------TTCCTTCC---------EEEEEECCTTCCHHHH-HHHHHH
T ss_pred ------c-cHHHH-HHHHHHccc--CCC------------Cccccccc---------EEEEecCCCccccccc-chhhhh
Confidence 5 79999 999999997 211 23333321 6999999864211000 000000
Q ss_pred HHHHHHHHHHHcCCCCcccccccCCCC----EEEEccChhHHHH-Hhhc-------CCC-ceEEEEeccccccccccccc
Q 016353 197 FEDKFVDTLKKYGYKGAYMSKEWLKQP----IFIQSFAPTSLVY-ISNK-------TDS-PKIFLIDDVDILTEDTNQSY 263 (391)
Q Consensus 197 ~~~~v~~~l~~~~~~~~~~~~~~~~~~----vii~Sf~~~~l~~-l~~~-------~p~-~~~~l~~~~~~~~~~~~~~~ 263 (391)
+++ .++++++..+. ..++ ++++||++..|.+ +++. .|. +..+++...... ..
T Consensus 109 ~~~---~ll~~~~~~~~------~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~------~~ 173 (285)
T 1xx1_A 109 VAK---ELLQNYWNNGN------NGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHEDLLEKVGYDFSGPYLP------SL 173 (285)
T ss_dssp HHH---HHHHHTSGGGS------SCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGGGGGGEEEEECCCCSS------SC
T ss_pred HHH---HHHHHHhhccc------cccccceeEEEEeCCHHHHHHHHHHHhhhccccCcccceEEeccccccc------ch
Confidence 222 26667665310 0136 9999999999999 9988 675 444554332000 00
Q ss_pred ccccchHHHHHHHhhhhhcCCCcceeeec--CC----C-CCCCCHHHHHHHHHcCC--eEEEEeecCcccccccccCCCc
Q 016353 264 SEITSDAYLNYIKEYCVGIGPWKDTVVPV--AN----N-YSQTPTDLVARAHALDL--QVHPYTYRNEHQFLHFNFLQDP 334 (391)
Q Consensus 264 ~~~~~~~~~~~i~~~~~~i~~~~~~l~~~--~~----~-~~~~~~~~v~~~~~~Gl--~V~~WTvn~~~~~~~~~~~~~~ 334 (391)
.. +..+..++..+++......+. .. . +..+++.+++.+|++|+ +|++||||+++++
T Consensus 174 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~~~~--------- 238 (285)
T 1xx1_A 174 PT------LDATHEAYKKAGVDGHIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKVSTT--------- 238 (285)
T ss_dssp CC------HHHHHHHHHHHTCCSCBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSHHHH---------
T ss_pred hh------HHHHHHHHHHhCCCCccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCHHHH---------
Confidence 00 111222222232211000110 00 1 23357889999999999 9999999999998
Q ss_pred hHHHHHHHHHcCccEEEeCCchhHHHHHhcc
Q 016353 335 YREYDYWINKIGVDGLFTDFPGSLHNYQELT 365 (391)
Q Consensus 335 ~~~~~~~l~~~GVdgIiTD~P~~l~~~~~~~ 365 (391)
+++.++||||||||+|+.+.++++..
T Consensus 239 -----~~l~~~GVDgIiTD~P~~~~~~l~~~ 264 (285)
T 1xx1_A 239 -----KAALDVGVDGIMTNYPNVLIGVLKES 264 (285)
T ss_dssp -----HHHHHHTCSEEEESCHHHHHHHHHST
T ss_pred -----HHHHhcCCCEEEeCCHHHHHHHHhhh
Confidence 57899999999999999999998854
No 17
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.91 E-value=1.1e-24 Score=200.97 Aligned_cols=240 Identities=15% Similarity=0.148 Sum_probs=139.8
Q ss_pred CCCC-EEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCc---ccccccCCccccccccccccc
Q 016353 41 TSRP-YNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFL---DDTTNIADHKEFADRKRTCMV 116 (391)
Q Consensus 41 ~~~p-~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l---~r~t~~~~~~~~~~~~~~~~~ 116 (391)
.++| .+|||| |||+++|+.|++.||++||+||++|+||++|++||... .|.+....
T Consensus 25 ~~rp~~~i~H~-------vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~------------- 84 (302)
T 3rlg_A 25 NRRPIWIMGAM-------VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCKKYE------------- 84 (302)
T ss_dssp CCEEEEEEESC-------CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCC-------------
T ss_pred CCCceEEEeeh-------hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCCCCc-------------
Confidence 3445 789997 99999999999999999999999999999999999844 44333221
Q ss_pred cCcccccceecccCHHHHccccccccccCCccccCCCccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCccc
Q 016353 117 QGVNTTGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKK 196 (391)
Q Consensus 117 ~g~~~~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~ 196 (391)
.+.+ .+++|+++..... +.|. .+.+.+.+|+|.+...... .+..+..
T Consensus 85 --------~~~~-~l~~lr~~ttpg~-----~k~~------------------~~l~lv~~DlK~~~l~~~~-~~~aG~~ 131 (302)
T 3rlg_A 85 --------NFND-FLKGLRSATTPGN-----SKYQ------------------EKLVLVVFDLKTGSLYDNQ-ANDAGKK 131 (302)
T ss_dssp --------BHHH-HHHHHHHHHSTTS-----TTCC------------------TTCCEEEEEECGGGSCGGG-HHHHHHH
T ss_pred --------cHHH-HHHHHHHhcCCCC-----Cccc------------------cceEEEEEEcCCCCCCHHH-HHHhHHH
Confidence 2444 5555555433210 0110 2356788899987654332 1223455
Q ss_pred HHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcC----CCceEEEEecccccccccccccccccchHHH
Q 016353 197 FEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKT----DSPKIFLIDDVDILTEDTNQSYSEITSDAYL 272 (391)
Q Consensus 197 ~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~----p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 272 (391)
+++++++.+-+.|..+. +-.|++|+|+..-++.++... ......|++...+ . +...+-+
T Consensus 132 la~kLl~~~w~~g~~~~-------ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~---------D-fs~n~dl 194 (302)
T 3rlg_A 132 LAKNLLQHYWNNGNNGG-------RAYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGH---------D-FSGNDDI 194 (302)
T ss_dssp HHHHHHHHTSGGGSSCC-------CCEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEE---------E-ECSCCCH
T ss_pred HHHHHHHHHHhcCCCCc-------eeEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCc---------c-ccCCCCH
Confidence 66666666666443321 247999999998777666531 1111111111100 0 0000001
Q ss_pred HHHHhhhhhcCCCcceeeec-CCCCCCCCHHHHHHHHHc-----C--CeEEEEeecCcccccccccCCCchHHHHHHHHH
Q 016353 273 NYIKEYCVGIGPWKDTVVPV-ANNYSQTPTDLVARAHAL-----D--LQVHPYTYRNEHQFLHFNFLQDPYREYDYWINK 344 (391)
Q Consensus 273 ~~i~~~~~~i~~~~~~l~~~-~~~~~~~~~~~v~~~~~~-----G--l~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~ 344 (391)
..+.......+......... ..+....+...++.+.+. | ++|++||||+++++ +++++
T Consensus 195 ~~i~~~~~~~Gi~~h~wqsDGItnC~~r~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~~~m--------------~~l~~ 260 (302)
T 3rlg_A 195 GDVGKAYKKAGITGHIWQSDGITNCLPRGLSRVNAAVANRDSANGFINKVYYWTVDKRSTT--------------RDALD 260 (302)
T ss_dssp HHHHHHHHHTTCCSCBEEEEECCTTSCCCSHHHHHHHHHHTSTTCCCSEEEEECCCSHHHH--------------HHHHH
T ss_pred HHHHHHHHhcCCcCcEEecCCcccceeccHHHHHHHHHhccCCCCceEEEEEEeCCCHHHH--------------HHHHH
Confidence 22222111122211111110 001112233333322222 3 78999999999999 68999
Q ss_pred cCccEEEeCCchhHHHHHhc
Q 016353 345 IGVDGLFTDFPGSLHNYQEL 364 (391)
Q Consensus 345 ~GVdgIiTD~P~~l~~~~~~ 364 (391)
+||||||||+|+.++++++.
T Consensus 261 ~GVDGIITD~Pd~l~~~l~~ 280 (302)
T 3rlg_A 261 AGVDGIMTNYPDVITDVLNE 280 (302)
T ss_dssp TTCSEEEESCHHHHHHHHTS
T ss_pred cCCCEEECCCHHHHHHHHHh
Confidence 99999999999999999873
No 18
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=95.43 E-value=0.0082 Score=61.87 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=42.6
Q ss_pred ecCCC---CCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcc
Q 016353 48 AHRGS---NGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLD 96 (391)
Q Consensus 48 aHRG~---~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~ 96 (391)
+|--. ....-+.|.++|..|+..||++||+|++=-.||+|||+|..||-
T Consensus 178 sHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tlt 229 (624)
T 1djx_A 178 SHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFT 229 (624)
T ss_dssp ESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSCC
T ss_pred ccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCccc
Confidence 77653 33566899999999999999999999999999999999999873
No 19
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=95.11 E-value=0.012 Score=62.30 Aligned_cols=49 Identities=20% Similarity=0.210 Sum_probs=42.3
Q ss_pred ecCCC---CCCCchhHHHHHHHHHHcCCCEEEeeeEEcC--CCeEEEEcCCCcc
Q 016353 48 AHRGS---NGEFPEETAAAYMRAIEEGADFIETDILASK--DGVLICHHDVFLD 96 (391)
Q Consensus 48 aHRG~---~~~~pENTl~Af~~A~~~Gad~vE~DV~lTk--Dg~~Vv~HD~~l~ 96 (391)
+|.-. ....-+-|.++|..|+..||++||+|++=-. ||+|||+|..+|-
T Consensus 326 SHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tlt 379 (799)
T 2zkm_X 326 SHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMT 379 (799)
T ss_dssp BSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSC
T ss_pred cccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCccc
Confidence 77653 3456689999999999999999999999877 9999999999873
No 20
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=94.79 E-value=0.016 Score=61.25 Aligned_cols=49 Identities=20% Similarity=0.263 Sum_probs=42.5
Q ss_pred ecCCC---CCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcc
Q 016353 48 AHRGS---NGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLD 96 (391)
Q Consensus 48 aHRG~---~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~ 96 (391)
+|.-. ....-+-|.++|..|+..||++||+|++=-.||+|||+|..+|-
T Consensus 337 shntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tlt 388 (816)
T 3qr0_A 337 SHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTMC 388 (816)
T ss_dssp BSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSSC
T ss_pred cccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCccc
Confidence 77643 33466789999999999999999999999999999999999874
No 21
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=93.47 E-value=0.033 Score=59.34 Aligned_cols=49 Identities=14% Similarity=0.178 Sum_probs=41.2
Q ss_pred ecCCC---CCCCchhHHHHHHHHHHcCCCEEEeeeEEc--CCCeEEEEcCCCcc
Q 016353 48 AHRGS---NGEFPEETAAAYMRAIEEGADFIETDILAS--KDGVLICHHDVFLD 96 (391)
Q Consensus 48 aHRG~---~~~~pENTl~Af~~A~~~Gad~vE~DV~lT--kDg~~Vv~HD~~l~ 96 (391)
+|.-. ....-+-|.++|..|+..||++||+|++=- .||+|||+|..++.
T Consensus 330 sHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~t 383 (885)
T 3ohm_B 330 SHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMT 383 (885)
T ss_dssp BSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSEE
T ss_pred cccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCccc
Confidence 67653 234567899999999999999999999965 78999999999873
No 22
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=91.60 E-value=1.5 Score=37.68 Aligned_cols=142 Identities=14% Similarity=0.090 Sum_probs=91.6
Q ss_pred ccccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhH
Q 016353 154 FPIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTS 233 (391)
Q Consensus 154 ~~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~ 233 (391)
-.|.+|+++.+.+++.++.+.+++|+=..- ... +..++.|.+. .. .--+.|-....
T Consensus 38 g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gl---------s~d---~~ai~fL~~~-~~-----------pdGIIsTk~~~ 93 (192)
T 3kts_A 38 THVAQLKALVKYAQAGGKKVLLHADLVNGL---------KND---DYAIDFLCTE-IC-----------PDGIISTRGNA 93 (192)
T ss_dssp EETTTHHHHHHHHHHTTCEEEEEGGGEETC---------CCS---HHHHHHHHHT-TC-----------CSEEEESCHHH
T ss_pred CcHHHHHHHHHHHHHcCCeEEEecCchhcc---------CCc---HHHHHHHHhC-CC-----------CCEEEeCcHHH
Confidence 378999999999999998777777764321 111 3344555552 21 23466778888
Q ss_pred HHHHhhcC--CCceEEEEecccccccccccccccccchHHHHHHHhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHc-
Q 016353 234 LVYISNKT--DSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYIKEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHAL- 310 (391)
Q Consensus 234 l~~l~~~~--p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~- 310 (391)
++..|+.. ..+++|+++... ++...+......|..-.+.| + +-+++++++++.
T Consensus 94 i~~Ak~~gL~tIqR~FliDS~a------------------l~~~~~~i~~~~PD~iEiLP---G---i~p~iI~~i~~~~ 149 (192)
T 3kts_A 94 IMKAKQHKMLAIQRLFMIDSSA------------------YNKGVALIQKVQPDCIELLP---G---IIPEQVQKMTQKL 149 (192)
T ss_dssp HHHHHHTTCEEEEEEECCSHHH------------------HHHHHHHHHHHCCSEEEEEC---T---TCHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEEEEEEcch------------------HHHHHHHHhhcCCCEEEECC---c---hhHHHHHHHHHhc
Confidence 88888873 345667665421 11122223334554334444 2 347888887655
Q ss_pred CCeEEEEe-ecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchh
Q 016353 311 DLQVHPYT-YRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGS 357 (391)
Q Consensus 311 Gl~V~~WT-vn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~ 357 (391)
+.++.+-+ ++++++. ..+.+.|+++|.|-.+..
T Consensus 150 ~~PiIaGGlI~~~edv--------------~~al~aGA~aVsTs~~~L 183 (192)
T 3kts_A 150 HIPVIAGGLIETSEQV--------------NQVIASGAIAVTTSNKHL 183 (192)
T ss_dssp CCCEEEESSCCSHHHH--------------HHHHTTTEEEEEECCGGG
T ss_pred CCCEEEECCcCCHHHH--------------HHHHHcCCeEEEeCCHHH
Confidence 78888886 6888877 468899999999988764
No 23
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=91.04 E-value=0.59 Score=43.42 Aligned_cols=49 Identities=18% Similarity=0.220 Sum_probs=36.2
Q ss_pred CEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcC-CCeEEEEcCCCcc
Q 016353 44 PYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASK-DGVLICHHDVFLD 96 (391)
Q Consensus 44 p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTk-Dg~~Vv~HD~~l~ 96 (391)
.++-+|--.... | ...+..|++.|+++||+||+-.. .|.+-|+|...+.
T Consensus 32 T~~g~HNSY~~g---~-~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~ 81 (339)
T 3h4x_A 32 TSVGVHNAYEKE---K-YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLG 81 (339)
T ss_dssp EEEEETTTTCTT---T-CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSS
T ss_pred eEeecccccccc---C-cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccc
Confidence 345577654221 1 46788999999999999999875 5579999987653
No 24
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=89.78 E-value=0.92 Score=38.88 Aligned_cols=138 Identities=15% Similarity=0.091 Sum_probs=88.5
Q ss_pred cccCHHHHHHHHHhcCCceeEEEeecCchhccccccccCcccHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHH
Q 016353 155 PIITFEEYISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSL 234 (391)
Q Consensus 155 ~ipTLeEvL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l 234 (391)
.+..|+++.+.+++.++.+.+++|+=..- ... +..++.++..+. -.+.|-....+
T Consensus 41 ~I~~L~~iv~~ik~~gK~vivh~DlI~GL---------s~d---~~ai~fL~~~~p-------------dGIIsTk~~~i 95 (188)
T 1vkf_A 41 DILNLKFHLKILKDRGKTVFVDMDFVNGL---------GEG---EEAILFVKKAGA-------------DGIITIKPKNY 95 (188)
T ss_dssp ETTTHHHHHHHHHHTTCEEEEEGGGEETC---------CSS---HHHHHHHHHHTC-------------SEEEESCHHHH
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCccccc---------CCC---HHHHHHHHhcCC-------------CEEEcCcHHHH
Confidence 56789999999998888888888765422 111 223344454443 34667777788
Q ss_pred HHHhhc--CCCceEEEEecccccccccccccccccchHHHHHHHhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHcCC
Q 016353 235 VYISNK--TDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYIKEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHALDL 312 (391)
Q Consensus 235 ~~l~~~--~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~Gl 312 (391)
...++. ...+++|+++...+ ....+.+ ....|..-.+.|- .+.+++++.+ .+.
T Consensus 96 ~~Akk~GL~tIqR~FliDs~al--------------~~~~~~I----~~~kPD~iEiLPg-----~v~p~~I~~v--~~~ 150 (188)
T 1vkf_A 96 VVAKKNGIPAVLRFFALDSKAV--------------ERGIEQI----ETLGVDVVEVLPG-----AVAPKVARKI--PGR 150 (188)
T ss_dssp HHHHHTTCCEEEEEECCSHHHH--------------HHHHHHH----HHHTCSEEEEESG-----GGHHHHHTTS--TTS
T ss_pred HHHHHcCCEEeeEEEEEEeHHH--------------hhhhhhc----cccCCCeEeecCC-----CchHHHHHHh--cCC
Confidence 888866 34567777764311 1112222 2234443334431 2257888888 688
Q ss_pred eEEEEe-ecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchh
Q 016353 313 QVHPYT-YRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGS 357 (391)
Q Consensus 313 ~V~~WT-vn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~ 357 (391)
++.+-. ++++++. .. .+.|+++|.|-.++.
T Consensus 151 PiIaGGlI~t~edv--------------~~-l~aGA~aIsTs~~~L 181 (188)
T 1vkf_A 151 TVIAAGLVETEEEA--------------RE-ILKHVSAISTSSRIL 181 (188)
T ss_dssp EEEEESCCCSHHHH--------------HH-HTTTSSEEEECCHHH
T ss_pred CEEEECCcCCHHHH--------------HH-HHCCCeEEEeCCHHH
Confidence 888886 6888877 46 889999999988764
No 25
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=81.58 E-value=14 Score=33.31 Aligned_cols=38 Identities=16% Similarity=0.103 Sum_probs=27.6
Q ss_pred CEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEE
Q 016353 44 PYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILA 81 (391)
Q Consensus 44 p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~l 81 (391)
+.+|++=-++.-.+|.|...++...+.|+|.||+++=.
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPf 55 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPF 55 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 33444432222234999999999999999999999865
No 26
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=73.42 E-value=52 Score=29.62 Aligned_cols=38 Identities=21% Similarity=0.182 Sum_probs=28.5
Q ss_pred CEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEE
Q 016353 44 PYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILA 81 (391)
Q Consensus 44 p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~l 81 (391)
+.+|++=-++.-.+|.|+...+...+.|+|.||+.+=.
T Consensus 20 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPf 57 (271)
T 3nav_A 20 GAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPF 57 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 44555543333456899999999999999999998764
No 27
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=64.01 E-value=16 Score=31.28 Aligned_cols=57 Identities=18% Similarity=0.111 Sum_probs=40.3
Q ss_pred CHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHH-cCccEEEeCCchhHHHHHhc
Q 016353 300 PTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINK-IGVDGLFTDFPGSLHNYQEL 364 (391)
Q Consensus 300 ~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~-~GVdgIiTD~P~~l~~~~~~ 364 (391)
-++.++.+|++|..+++ -++..+.+. .|.+ --.+|.+ .++|||||-++..+...++.
T Consensus 43 l~~~v~~lk~~~K~v~V-h~Dli~Gls-----~d~~--ai~fL~~~~~pdGIIsTk~~~i~~Ak~~ 100 (192)
T 3kts_A 43 LKALVKYAQAGGKKVLL-HADLVNGLK-----NDDY--AIDFLCTEICPDGIISTRGNAIMKAKQH 100 (192)
T ss_dssp HHHHHHHHHHTTCEEEE-EGGGEETCC-----CSHH--HHHHHHHTTCCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCeEEE-ecCchhccC-----CcHH--HHHHHHhCCCCCEEEeCcHHHHHHHHHC
Confidence 47899999999999999 445444442 1221 1134554 58999999999999888763
No 28
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=62.72 E-value=53 Score=28.85 Aligned_cols=42 Identities=17% Similarity=0.240 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCch
Q 016353 299 TPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPG 356 (391)
Q Consensus 299 ~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~ 356 (391)
.++++++.++++|+.+.+- +.++.++ .+..++|+|.|-. +|.
T Consensus 115 ~~~~vi~~~~~~gi~~ipG-v~TptEi--------------~~A~~~Gad~vK~-FPa 156 (232)
T 4e38_A 115 FNPNTVRACQEIGIDIVPG-VNNPSTV--------------EAALEMGLTTLKF-FPA 156 (232)
T ss_dssp CCHHHHHHHHHHTCEEECE-ECSHHHH--------------HHHHHTTCCEEEE-CST
T ss_pred CCHHHHHHHHHcCCCEEcC-CCCHHHH--------------HHHHHcCCCEEEE-CcC
Confidence 4799999999999999884 5567776 4678999999988 774
No 29
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=58.11 E-value=16 Score=31.21 Aligned_cols=57 Identities=12% Similarity=-0.034 Sum_probs=39.6
Q ss_pred CHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhHHHHHhc
Q 016353 300 PTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSLHNYQEL 364 (391)
Q Consensus 300 ~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l~~~~~~ 364 (391)
-++.++.+|++|+.|++..-+ -+.+. .|.+ --.+|...++|||||-.+..+...++.
T Consensus 45 L~~iv~~ik~~gK~vivh~Dl-I~GLs-----~d~~--ai~fL~~~~pdGIIsTk~~~i~~Akk~ 101 (188)
T 1vkf_A 45 LKFHLKILKDRGKTVFVDMDF-VNGLG-----EGEE--AILFVKKAGADGIITIKPKNYVVAKKN 101 (188)
T ss_dssp HHHHHHHHHHTTCEEEEEGGG-EETCC-----SSHH--HHHHHHHHTCSEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCeEEEecCc-ccccC-----CCHH--HHHHHHhcCCCEEEcCcHHHHHHHHHc
Confidence 478999999999999998521 11110 1111 113456789999999999999887763
No 30
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=56.17 E-value=4.3 Score=31.40 Aligned_cols=39 Identities=23% Similarity=0.365 Sum_probs=30.9
Q ss_pred HHHHHHHHH-------cCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEe
Q 016353 301 TDLVARAHA-------LDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFT 352 (391)
Q Consensus 301 ~~~v~~~~~-------~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiT 352 (391)
+++++.+++ .|+.+|+|-.++.+.|. ..+.+..+||+++
T Consensus 47 ~e~v~~~REAiLDNIDlG~el~~WKp~eVdkm~-------------~k~~q~~~dGl~i 92 (126)
T 2rbg_A 47 QELVTLIREALLENIDIGYELFLWKKNEVDIFL-------------KNLEKSEVDGLLV 92 (126)
T ss_dssp HHHHHHTHHHHHHTTTSEEEEEEECGGGHHHHH-------------HHHTTCCCCEEEE
T ss_pred HHHHHHHHHHHHhccccceEEEEeCHHHHHHHH-------------HHHHHhCCCceEE
Confidence 455555554 49999999999998885 5788899999987
No 31
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=54.89 E-value=1.1e+02 Score=26.66 Aligned_cols=119 Identities=13% Similarity=0.087 Sum_probs=64.9
Q ss_pred cHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceEEEEecccccccccccccccccchHHHHHH
Q 016353 196 KFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYI 275 (391)
Q Consensus 196 ~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 275 (391)
.....+++.+.+.|... +.+ -+++.++.+|+....|.+.+.-.. . .+. .-+..+ ..+.+
T Consensus 36 ~~~~~~A~a~~~~Ga~~-----------i~~--~~~~~i~~ir~~v~~Pvig~~k~~-~--~~~----~~~I~~-~~~~i 94 (229)
T 3q58_A 36 EIVAAMAQAAASAGAVA-----------VRI--EGIENLRTVRPHLSVPIIGIIKRD-L--TGS----PVRITP-YLQDV 94 (229)
T ss_dssp HHHHHHHHHHHHTTCSE-----------EEE--ESHHHHHHHGGGCCSCEEEECBCC-C--SSC----CCCBSC-SHHHH
T ss_pred chHHHHHHHHHHCCCcE-----------EEE--CCHHHHHHHHHhcCCCEEEEEeec-C--CCC----ceEeCc-cHHHH
Confidence 45677888888888753 333 357789999988767766443210 0 000 000111 01111
Q ss_pred HhhhhhcCCCcceeeecCCC--CCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeC
Q 016353 276 KEYCVGIGPWKDTVVPVANN--YSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD 353 (391)
Q Consensus 276 ~~~~~~i~~~~~~l~~~~~~--~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD 353 (391)
... ...+. +.+...... ......++++.+|+.|+.+.+- +.+.++. .++.+.|+|.|.+.
T Consensus 95 ~~~-~~aGa--d~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~-v~t~eea--------------~~a~~~Gad~Ig~~ 156 (229)
T 3q58_A 95 DAL-AQAGA--DIIAFDASFRSRPVDIDSLLTRIRLHGLLAMAD-CSTVNEG--------------ISCHQKGIEFIGTT 156 (229)
T ss_dssp HHH-HHHTC--SEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEE-CSSHHHH--------------HHHHHTTCSEEECT
T ss_pred HHH-HHcCC--CEEEECccccCChHHHHHHHHHHHHCCCEEEEe-cCCHHHH--------------HHHHhCCCCEEEec
Confidence 111 11222 122211110 1123478999999999998874 4555555 46889999999753
No 32
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=54.73 E-value=1.2e+02 Score=27.16 Aligned_cols=127 Identities=9% Similarity=-0.038 Sum_probs=76.1
Q ss_pred ccCHHHHHHHHH---h-cCCceeEEEeecCchhccccccccCcccHHHHHHHHHHHcCCCCcccccccCCCCEE-EEccC
Q 016353 156 IITFEEYISIAL---D-AQRVVGIYPEMKNPVFINQHVKWADGKKFEDKFVDTLKKYGYKGAYMSKEWLKQPIF-IQSFA 230 (391)
Q Consensus 156 ipTLeEvL~~~~---~-~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~vi-i~Sf~ 230 (391)
--|-+|.+..++ + ....-++.+|+-.+..+. .|+.... -+..+.+.+.|+. ++ +.+-|
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~l----lpD~~~t-v~aa~~L~~~Gf~------------Vlpy~~dd 145 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTL----FPNVVET-LKAAEQLVKDGFD------------VMVYTSDD 145 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTC----CBCHHHH-HHHHHHHHTTTCE------------EEEEECSC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCcccc----CcCHHHH-HHHHHHHHHCCCE------------EEEEeCCC
Confidence 346777776654 3 222347888887544321 1222222 2345555566764 66 57778
Q ss_pred hhHHHHHhhcCCCceEEEEecccccccccccccccccchHHHHHHHhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHc
Q 016353 231 PTSLVYISNKTDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYIKEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHAL 310 (391)
Q Consensus 231 ~~~l~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~ 310 (391)
+...+++.+..+.... -.+.. +| .+....++++++.+++.
T Consensus 146 ~~~akrl~~~G~~aVm--Plg~p----------------------------IG----------sG~Gi~~~~lI~~I~e~ 185 (265)
T 1wv2_A 146 PIIARQLAEIGCIAVM--PLAGL----------------------------IG----------SGLGICNPYNLRIILEE 185 (265)
T ss_dssp HHHHHHHHHSCCSEEE--ECSSS----------------------------TT----------CCCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEE--eCCcc----------------------------CC----------CCCCcCCHHHHHHHHhc
Confidence 8888888776443221 10100 11 01123478899988886
Q ss_pred -CCeEEEE-eecCcccccccccCCCchHHHHHHHHHcCccEEEeC
Q 016353 311 -DLQVHPY-TYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD 353 (391)
Q Consensus 311 -Gl~V~~W-Tvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD 353 (391)
+++|.+= .+.++++. ..+.++|+|||...
T Consensus 186 ~~vPVI~eGGI~TPsDA--------------a~AmeLGAdgVlVg 216 (265)
T 1wv2_A 186 AKVPVLVDAGVGTASDA--------------AIAMELGCEAVLMN 216 (265)
T ss_dssp CSSCBEEESCCCSHHHH--------------HHHHHHTCSEEEES
T ss_pred CCCCEEEeCCCCCHHHH--------------HHHHHcCCCEEEEC
Confidence 6777776 58888887 57889999999876
No 33
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=50.76 E-value=9.7 Score=34.65 Aligned_cols=66 Identities=24% Similarity=0.288 Sum_probs=43.1
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhHHHHHhccCCCCCCc---hHHHH
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSLHNYQELTSPVSKDN---RASKL 377 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l~~~~~~~~~~~~~~---~~~~~ 377 (391)
.++++.+|+.|+...+++.|-++ . +.+.++|+|.|+..-|-+.-...-....+|.+. +.+++
T Consensus 153 ve~I~~A~~~gL~Ti~~v~~~ee-A--------------~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i 217 (286)
T 2p10_A 153 VEMIAEAHKLDLLTTPYVFSPED-A--------------VAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINEC 217 (286)
T ss_dssp HHHHHHHHHTTCEECCEECSHHH-H--------------HHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEecCCHHH-H--------------HHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHH
Confidence 67899999999999999866444 4 468899999999999966555555555666544 45554
Q ss_pred Hhhh
Q 016353 378 LHKI 381 (391)
Q Consensus 378 ~~~~ 381 (391)
.+.+
T Consensus 218 ~~a~ 221 (286)
T 2p10_A 218 IEAA 221 (286)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 34
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=49.09 E-value=16 Score=37.23 Aligned_cols=48 Identities=19% Similarity=0.223 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCch
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPG 356 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~ 356 (391)
+++++++|++|+.++.|.--..- ..++.+.+ +++.++||+||=+|+.+
T Consensus 350 ~~l~~Ya~~kgV~i~lw~~~~~~-------~~~~~~~~-~~~~~~Gv~gvK~Df~~ 397 (641)
T 3a24_A 350 KELVDYAASKNVGIILWAGYHAF-------ERDMENVC-RHYAEMGVKGFKVDFMD 397 (641)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHH-------HTSHHHHH-HHHHHHTCCEEEEECCC
T ss_pred HHHHHHHHhcCCEEEEEeeCcch-------HHHHHHHH-HHHHHcCCCEEEECCCC
Confidence 89999999999999999754321 12223333 57889999999999874
No 35
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=48.27 E-value=16 Score=32.86 Aligned_cols=36 Identities=14% Similarity=0.090 Sum_probs=29.3
Q ss_pred HHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEe
Q 016353 303 LVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFT 352 (391)
Q Consensus 303 ~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiT 352 (391)
..+.+.+.|+.|++|+.+++... +++.++|++.|+-
T Consensus 127 aa~~L~~~Gf~Vlpy~~dd~~~a--------------krl~~~G~~aVmP 162 (265)
T 1wv2_A 127 AAEQLVKDGFDVMVYTSDDPIIA--------------RQLAEIGCIAVMP 162 (265)
T ss_dssp HHHHHHTTTCEEEEEECSCHHHH--------------HHHHHSCCSEEEE
T ss_pred HHHHHHHCCCEEEEEeCCCHHHH--------------HHHHHhCCCEEEe
Confidence 34455555999999999999877 6899999999965
No 36
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=45.71 E-value=26 Score=36.25 Aligned_cols=51 Identities=8% Similarity=0.130 Sum_probs=37.6
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCc
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
++++++++++|+.++.|.--..... +|..++++.+ +++.++||.||=+|+.
T Consensus 421 ~eL~~YA~sKGV~iilw~~t~~~~~---n~e~~~d~~f-~~~~~~Gv~GVKvdF~ 471 (738)
T 2d73_A 421 KEIHRYAARKGIKMMMHHETSASVR---NYERHMDKAY-QFMADNGYNSVKSGYV 471 (738)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTBHH---HHHHHHHHHH-HHHHHTTCCEEEEECC
T ss_pred HHHHHHHHhCCCEEEEEEcCCCchh---hHHHHHHHHH-HHHHHcCCCEEEeCcc
Confidence 8999999999999999986554211 1112233333 5788999999999998
No 37
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=45.31 E-value=1.5e+02 Score=25.66 Aligned_cols=119 Identities=14% Similarity=0.147 Sum_probs=64.3
Q ss_pred cHHHHHHHHHHHcCCCCcccccccCCCCEEEEccChhHHHHHhhcCCCceEEEEecccccccccccccccccchHHHHHH
Q 016353 196 KFEDKFVDTLKKYGYKGAYMSKEWLKQPIFIQSFAPTSLVYISNKTDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNYI 275 (391)
Q Consensus 196 ~~~~~v~~~l~~~~~~~~~~~~~~~~~~vii~Sf~~~~l~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 275 (391)
.....+++.+.+.|... +.+ -+.+.++.+|+....|.+...-. +. .+. .-+..+ ..+.+
T Consensus 36 ~~~~~~A~a~~~~Ga~~-----------i~~--~~~~~i~~ir~~v~~Pvig~~k~-d~--~~~----~~~I~~-~~~~i 94 (232)
T 3igs_A 36 EIVAAMALAAEQAGAVA-----------VRI--EGIDNLRMTRSLVSVPIIGIIKR-DL--DES----PVRITP-FLDDV 94 (232)
T ss_dssp HHHHHHHHHHHHTTCSE-----------EEE--ESHHHHHHHHTTCCSCEEEECBC-CC--SSC----CCCBSC-SHHHH
T ss_pred chHHHHHHHHHHCCCeE-----------EEE--CCHHHHHHHHHhcCCCEEEEEee-cC--CCc----ceEeCc-cHHHH
Confidence 45677888888888753 333 35778999998876676543211 00 000 000011 01111
Q ss_pred HhhhhhcCCCcceeeecCCC--CCCCCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeC
Q 016353 276 KEYCVGIGPWKDTVVPVANN--YSQTPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD 353 (391)
Q Consensus 276 ~~~~~~i~~~~~~l~~~~~~--~~~~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD 353 (391)
... ...+. +.+...... ......++++.+|+.|+.+.+ .+.+.++. .++.+.|+|.|.+.
T Consensus 95 ~~~-~~~Ga--d~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~-~v~t~eea--------------~~a~~~Gad~Ig~~ 156 (232)
T 3igs_A 95 DAL-AQAGA--AIIAVDGTARQRPVAVEALLARIHHHHLLTMA-DCSSVDDG--------------LACQRLGADIIGTT 156 (232)
T ss_dssp HHH-HHHTC--SEEEEECCSSCCSSCHHHHHHHHHHTTCEEEE-ECCSHHHH--------------HHHHHTTCSEEECT
T ss_pred HHH-HHcCC--CEEEECccccCCHHHHHHHHHHHHHCCCEEEE-eCCCHHHH--------------HHHHhCCCCEEEEc
Confidence 111 11222 122211110 112347899999999999887 44555555 46889999999753
No 38
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=42.21 E-value=12 Score=32.91 Aligned_cols=29 Identities=28% Similarity=0.412 Sum_probs=25.3
Q ss_pred chhHHHHHHHHHHcCCCEEEeeeEEcCCCeEE
Q 016353 57 PEETAAAYMRAIEEGADFIETDILASKDGVLI 88 (391)
Q Consensus 57 pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~V 88 (391)
.+|.....+.+.+.|+|++|+|+ +||..|
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi---~DG~fv 44 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDV---MDGRFV 44 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEE---EBSSSS
T ss_pred HhHHHHHHHHHHHcCCCEEEEEE---EecCCC
Confidence 78999999999999999999999 466544
No 39
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=38.81 E-value=16 Score=25.37 Aligned_cols=43 Identities=21% Similarity=0.250 Sum_probs=26.9
Q ss_pred EecCCCCC--CCchhHHHHHHHHHHc-CCCEEEeeeEEcCCCeEEEE
Q 016353 47 LAHRGSNG--EFPEETAAAYMRAIEE-GADFIETDILASKDGVLICH 90 (391)
Q Consensus 47 iaHRG~~~--~~pENTl~Af~~A~~~-Gad~vE~DV~lTkDg~~Vv~ 90 (391)
-+|+|+.| .+-=|=-..+..|+.. --|.+|+-|- ++||++|++
T Consensus 14 ~~~kgg~g~etyYInIPaeI~kaLgIk~gD~fel~ve-~kdgeIvLc 59 (68)
T 3o27_A 14 RAYKGGSGHTTFYLLIPKDIAEALDIKPDDTFILNME-QKDGDIVLS 59 (68)
T ss_dssp EEC-----CCCEEEEECHHHHHHTTCCTTCCEEEEEE-EETTEEEEE
T ss_pred eeeeCCCCceEEEEeCcHHHHHHhCCCCCCEEEEEEe-cCCCeEEEE
Confidence 48999875 2444666778888764 3367888777 899988876
No 40
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=38.60 E-value=65 Score=30.13 Aligned_cols=54 Identities=20% Similarity=0.071 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCeEEEEeecCccccc-c-cccCCCchHHHHHHHHHcCccEEEeCCc
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFL-H-FNFLQDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~-~-~~~~~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
+.+++++|++|+++..|.--...... . ....+. .+...+.+.++|||+|=.|+-
T Consensus 77 ~~l~~~ih~~Glk~Giw~~~~~~~~~~~~pg~~~~-~~~~~~~~~~wGvdyvK~D~~ 132 (362)
T 1uas_A 77 KALADYVHAKGLKLGIYSDAGSQTCSNKMPGSLDH-EEQDVKTFASWGVDYLKYDNC 132 (362)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSSSBCCTTC-HHHHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHHCCCEeEEEeeCCCccccCCCCCchhH-HHHHHHHHHHcCCCEEEECcc
Confidence 78999999999999999854332211 0 001112 234445688999999999973
No 41
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=37.02 E-value=51 Score=28.66 Aligned_cols=43 Identities=21% Similarity=0.373 Sum_probs=34.7
Q ss_pred CCHHHHHHHHHcCC------eEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchh
Q 016353 299 TPTDLVARAHALDL------QVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGS 357 (391)
Q Consensus 299 ~~~~~v~~~~~~Gl------~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~ 357 (391)
.++++++.++++|+ .+.+ .+.++.++ ....++|+|.|=. +|..
T Consensus 94 ~~~evi~~~~~~~v~~~~~~~~~P-G~~TptE~--------------~~A~~~Gad~vK~-FPa~ 142 (217)
T 3lab_A 94 LTPELIEKAKQVKLDGQWQGVFLP-GVATASEV--------------MIAAQAGITQLKC-FPAS 142 (217)
T ss_dssp CCHHHHHHHHHHHHHCSCCCEEEE-EECSHHHH--------------HHHHHTTCCEEEE-TTTT
T ss_pred CcHHHHHHHHHcCCCccCCCeEeC-CCCCHHHH--------------HHHHHcCCCEEEE-Cccc
Confidence 48999999999999 8888 55777776 3678999999965 6644
No 42
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=34.87 E-value=16 Score=31.78 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=22.5
Q ss_pred CchhHHHHHHHHHHcCCCEEEeee
Q 016353 56 FPEETAAAYMRAIEEGADFIETDI 79 (391)
Q Consensus 56 ~pENTl~Af~~A~~~Gad~vE~DV 79 (391)
.++++....+.+.+.|++++|+|+
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~ 44 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDV 44 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEee
Confidence 478999999999999999999999
No 43
>3kzp_A LMO0111 protein, putative diguanylate cyclase/phosphodiesterase; EAL-domain, structural genomics, PSI-2; 2.00A {Listeria monocytogenes}
Probab=34.45 E-value=37 Score=29.16 Aligned_cols=37 Identities=11% Similarity=0.017 Sum_probs=32.2
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEE
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLF 351 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIi 351 (391)
..++..+|+.|++|.+=.|.+.++. ..+.++|+|.+.
T Consensus 189 ~~i~~~a~~lg~~viaeGVEt~~~~--------------~~l~~~G~~~~Q 225 (235)
T 3kzp_A 189 KAWANFAQKNKLDFVVEGIETKETM--------------TLLESHGVSIFQ 225 (235)
T ss_dssp HHHHHHHHHTTCEEEEEEECSTHHH--------------HHHHHTTCCSCE
T ss_pred HHHHHHHHHcCCEEEEEEecCHHHH--------------HHHHHcCCCEee
Confidence 5677888999999999999999998 589999998654
No 44
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=33.96 E-value=19 Score=31.34 Aligned_cols=28 Identities=36% Similarity=0.383 Sum_probs=24.3
Q ss_pred CchhHHHHHHHHHHcCCCEEEeeeEEcCCCe
Q 016353 56 FPEETAAAYMRAIEEGADFIETDILASKDGV 86 (391)
Q Consensus 56 ~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~ 86 (391)
...|+....+.+.+.|+|++++|+ +||.
T Consensus 17 d~~~l~~~i~~~~~~Gad~i~l~i---~Dg~ 44 (228)
T 1h1y_A 17 DFANLAAEADRMVRLGADWLHMDI---MDGH 44 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEE---EBSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEE---ecCC
Confidence 388999999999999999999999 4553
No 45
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=32.85 E-value=45 Score=26.84 Aligned_cols=50 Identities=12% Similarity=0.183 Sum_probs=31.5
Q ss_pred CHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCc--cEEEeCCchhHH
Q 016353 300 PTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGV--DGLFTDFPGSLH 359 (391)
Q Consensus 300 ~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GV--dgIiTD~P~~l~ 359 (391)
..+.++.++++|..+..+|-...... .++..++.+.|+ +.|..|+|+...
T Consensus 29 ~~~al~~l~~~G~~iii~TgR~~~~~----------~~~~~~l~~~gi~~~~I~~n~P~~~~ 80 (142)
T 2obb_A 29 AVETLKLLQQEKHRLILWSVREGELL----------DEAIEWCRARGLEFYAANKDYPEEER 80 (142)
T ss_dssp HHHHHHHHHHTTCEEEECCSCCHHHH----------HHHHHHHHTTTCCCSEESSSSTTC--
T ss_pred HHHHHHHHHHCCCEEEEEeCCCcccH----------HHHHHHHHHcCCCeEEEEcCCchhhh
Confidence 46778888888999999987753322 222345666665 456667787543
No 46
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=32.55 E-value=91 Score=29.62 Aligned_cols=55 Identities=20% Similarity=-0.021 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCc
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
+.+++++|++|+++..|.--........-...+-.....+.+.++|||+|=.|+-
T Consensus 77 ~~l~~~i~~~Glk~Giw~~pg~~tc~~~pg~~~~~~~~~~~~~~wGvdyvK~D~~ 131 (397)
T 3a5v_A 77 KPLVDDIHNLGLKAGIYSSAGTLTCGGHIASLGYEDIDAKTWAKWGIDYLKYDNC 131 (397)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHHHHHHHHHHTCCEEEEECT
T ss_pred HHHHHHHHHcCCEEEEEecCCCCccCCCHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 6889999999999999974322100000001111222234677899999999973
No 47
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=32.18 E-value=31 Score=30.32 Aligned_cols=40 Identities=20% Similarity=0.060 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCC
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDF 354 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~ 354 (391)
..+++.+|+.|+.|.+=.|.+.+++ ..+.++|+|.+.-.+
T Consensus 199 ~~i~~~a~~~g~~viaeGVEt~~~~--------------~~l~~lG~~~~QG~~ 238 (259)
T 3s83_A 199 RSVVKLGQDLDLEVVAEGVENAEMA--------------HALQSLGCDYGQGFG 238 (259)
T ss_dssp HHHHHHHHHTTCEEEECCCCSHHHH--------------HHHHHHTCCEECBTT
T ss_pred HHHHHHHHHCCCeEEEEeCCCHHHH--------------HHHHhcCCCEeecCc
Confidence 5678899999999999999999988 589999999887763
No 48
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=32.17 E-value=36 Score=31.65 Aligned_cols=39 Identities=21% Similarity=0.106 Sum_probs=35.2
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeC
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD 353 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD 353 (391)
..++..+|+.|+.|.+-.|.+.+++ ..+.++|+|.+.--
T Consensus 272 ~~ii~la~~lg~~vvAEGVEt~~q~--------------~~L~~lG~d~~QGy 310 (340)
T 4hjf_A 272 RSVVKLGQDLDLEVVAEGVENAEMA--------------HALQSLGCDYGQGF 310 (340)
T ss_dssp HHHHHHHHHHTCEEEEECCCSHHHH--------------HHHHHTTCCEEEST
T ss_pred HHHHHHHHHcCCEEEEEeCCcHHHH--------------HHHHHcCCCEeecC
Confidence 5778899999999999999999988 68999999998775
No 49
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=32.02 E-value=2e+02 Score=24.67 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=23.6
Q ss_pred CCCCHHHHHHHHHcCCeEEEEeecCccc
Q 016353 297 SQTPTDLVARAHALDLQVHPYTYRNEHQ 324 (391)
Q Consensus 297 ~~~~~~~v~~~~~~Gl~V~~WTvn~~~~ 324 (391)
...++...+.+++.|+.+..|+++..+.
T Consensus 132 G~~~~~~~~~l~~~G~~~~~w~~d~~Dw 159 (230)
T 2y8u_A 132 LETNELVLQVMRDLDYRVISASVDTKDY 159 (230)
T ss_dssp GCCCHHHHHHHHHTTCEEECCSEECCGG
T ss_pred CCCCHHHHHHHHHcCCEEEEecCCCCcc
Confidence 3457899999999999999999987654
No 50
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=31.71 E-value=24 Score=30.88 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeC
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD 353 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD 353 (391)
..++..+|+.|+.|.+=.|.+.+++ ..+.++|+|.+.-.
T Consensus 203 ~~i~~~a~~l~~~viaeGVEt~~~~--------------~~l~~~G~~~~QG~ 241 (250)
T 4f3h_A 203 REITSRAQPTGILTVAEFVADAQSM--------------SSFFTAGVDYVQGD 241 (250)
T ss_dssp HHTHHHHHHHTCEEEECCCCCHHHH--------------HHHHHHTCSEECST
T ss_pred HHHHHHHHHcCCEEEEeccCCHHHH--------------HHHHHcCCCEEeec
Confidence 5678889999999999999999988 57999999987654
No 51
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=31.61 E-value=2.1e+02 Score=23.72 Aligned_cols=28 Identities=11% Similarity=0.060 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHcCCeEEEEeecCccc
Q 016353 297 SQTPTDLVARAHALDLQVHPYTYRNEHQ 324 (391)
Q Consensus 297 ~~~~~~~v~~~~~~Gl~V~~WTvn~~~~ 324 (391)
...++...+.+++.|+.+..|+++..+.
T Consensus 104 G~~~~~~~~~~~~~G~~~v~w~~d~~Dw 131 (195)
T 2cc0_A 104 GETNATLRSVEAKYGLTEVIWDVDSQDW 131 (195)
T ss_dssp GCCCHHHHHHHHHTTCEECCCSEECCGG
T ss_pred CCcCHHHHHHHHHCCCeEEEeccCCCcc
Confidence 3457889999999999999999987653
No 52
>3tlq_A Regulatory protein YDIV; anti-FLHD4C2 factor, repress motility, transcription; 1.91A {Escherichia coli}
Probab=31.30 E-value=22 Score=31.18 Aligned_cols=38 Identities=8% Similarity=-0.073 Sum_probs=34.0
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEe
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFT 352 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiT 352 (391)
..+++.+|+.|+.|.+=.|.+.++. ..+.++|+|.+.-
T Consensus 188 ~~ii~~a~~l~~~vvAEGVEt~~q~--------------~~l~~lG~~~~QG 225 (242)
T 3tlq_A 188 RAIQAQISPCCNCIIAGGIDTAEIL--------------AQITPFDFHALQG 225 (242)
T ss_dssp HHHHHHHTTTCSEEEECCCCSHHHH--------------HHHGGGCCSEECS
T ss_pred HHHHHHHHHcCCEEEEEeCCcHHHH--------------HHHHHcCCCEEeC
Confidence 6788999999999999999999988 6899999998754
No 53
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=30.20 E-value=76 Score=28.92 Aligned_cols=56 Identities=11% Similarity=0.070 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCeEEEEeecCcccccccccCCCch--HHHHHHHHHcCccEEEeCCc-hhHHHHHh
Q 016353 302 DLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPY--REYDYWINKIGVDGLFTDFP-GSLHNYQE 363 (391)
Q Consensus 302 ~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~--~~~~~~l~~~GVdgIiTD~P-~~l~~~~~ 363 (391)
++++.+|++|+++.+|+...... ..|+. ...-+...++|+|.|-|.+| +.+.++.+
T Consensus 162 ~v~~~a~~~GlpvIie~~~G~~~------~~d~e~i~~aariA~elGAD~VKt~~t~e~~~~vv~ 220 (295)
T 3glc_A 162 QLVDAGMKVGMPTMAVTGVGKDM------VRDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVA 220 (295)
T ss_dssp HHHHHHHTTTCCEEEEECC----------CCSHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCcc------CCCHHHHHHHHHHHHHhCCCEEEeCCCHHHHHHHHH
Confidence 67788999999999998431111 11221 11223456899999999998 55655553
No 54
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=30.04 E-value=1.2e+02 Score=26.62 Aligned_cols=63 Identities=17% Similarity=0.153 Sum_probs=42.8
Q ss_pred hhhhhcCCCcceeeec-----C--CCCCCC-----CHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHH
Q 016353 277 EYCVGIGPWKDTVVPV-----A--NNYSQT-----PTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINK 344 (391)
Q Consensus 277 ~~~~~i~~~~~~l~~~-----~--~~~~~~-----~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~ 344 (391)
..+..+.|..-.++|. . .++... -...++.+++.|+.|....--+++++ ....+
T Consensus 81 ~ia~~~kP~~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi--------------~aA~~ 146 (243)
T 1m5w_A 81 AIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQI--------------KAAAE 146 (243)
T ss_dssp HHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHHH--------------HHHHH
T ss_pred HHHHHcCCCEEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHHH--------------HHHHH
Confidence 3444566665566665 1 122211 16789999999999999887666666 56888
Q ss_pred cCccEEEeC
Q 016353 345 IGVDGLFTD 353 (391)
Q Consensus 345 ~GVdgIiTD 353 (391)
.|+|.|--.
T Consensus 147 ~GA~~IELh 155 (243)
T 1m5w_A 147 VGAPFIEIH 155 (243)
T ss_dssp TTCSEEEEE
T ss_pred hCcCEEEEe
Confidence 999998544
No 55
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=29.66 E-value=38 Score=30.76 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCC---chhHHHH
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDF---PGSLHNY 361 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~---P~~l~~~ 361 (391)
..+++.+|+.|+.|.+=.|.+.++. ..+.++|+|.+.--+ |....++
T Consensus 223 ~~ii~la~~lg~~vvAEGVEt~~q~--------------~~l~~lG~d~~QGy~~~~P~~~~~~ 272 (294)
T 2r6o_A 223 TTILALARGLGMEVVAEGIETAQQY--------------AFLRDRGCEFGQGNLMSTPQAADAF 272 (294)
T ss_dssp HHHHHHHHHTTCEEEECCCCSHHHH--------------HHHHHTTCCEECSTTTCCCEEHHHH
T ss_pred HHHHHHHHHCCCEEEEecCCcHHHH--------------HHHHHcCCCEEEcCccCCCCCHHHH
Confidence 5678899999999999999999988 689999999987763 5444433
No 56
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=28.52 E-value=3e+02 Score=24.15 Aligned_cols=185 Identities=10% Similarity=-0.071 Sum_probs=0.0
Q ss_pred CCCEEEecCCCCCCCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEEEcCCCcccccccCCccccccccccccccCccc
Q 016353 42 SRPYNLAHRGSNGEFPEETAAAYMRAIEEGADFIETDILASKDGVLICHHDVFLDDTTNIADHKEFADRKRTCMVQGVNT 121 (391)
Q Consensus 42 ~~p~iiaHRG~~~~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv~HD~~l~r~t~~~~~~~~~~~~~~~~~~g~~~ 121 (391)
+.|+++|=-|.. .+|.|+.++..+ |+|.||+=+..+ |.. .
T Consensus 12 ~~~~~~~t~g~p--~~~~~~~~l~~~---Gad~ielg~pr~-~~~---------------g------------------- 51 (264)
T 1xm3_A 12 QSRLLLGTGKYP--SFDIQKEAVAVS---ESDILTFAVRRM-NIF---------------E------------------- 51 (264)
T ss_dssp SCCEEEECSCSS--CHHHHHHHHHHH---TCSEEEEETTSS-TTC-----------------------------------
T ss_pred cCCCEEEecCCC--CHHHHHHHHHHc---CCeEEEEccccc-ccC---------------C-------------------
Q ss_pred ccceecccCHHHHccccccccccCCccccCCCccccCHHH---HHHHHHhcCCceeEEEeecCchhccccccccCcccHH
Q 016353 122 TGFFVVDFTLEELKTLRAKQRYSFRDQQYNGKFPIITFEE---YISIALDAQRVVGIYPEMKNPVFINQHVKWADGKKFE 198 (391)
Q Consensus 122 ~g~~v~dlt~~EL~~l~~~~~~~~r~~~~~~~~~ipTLeE---vL~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~ 198 (391)
.--+-.++.|++++...-.+ ....-+.+| +++.+++.+..-.+.+|+=.... ....-.
T Consensus 52 ---~~~~~~~~~l~~~~~~~~pn--------~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~--------~~~~e~ 112 (264)
T 1xm3_A 52 ---ASQPNFLEQLDLSKYTLLPN--------TAGASTAEEAVRIARLAKASGLCDMIKVEVIGCSR--------SLLPDP 112 (264)
T ss_dssp ---------CTTCCGGGSEEEEE--------CTTCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTT--------TCCBCH
T ss_pred ---CCHHHHHHHHHhcCCeEcCC--------ccccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCc--------ccccch
Q ss_pred HHHHHHHHHc---CCCCcccccccCCCCEE-EEccChhHHHHHhhcCCCceEEEEecccccccccccccccccchHHHHH
Q 016353 199 DKFVDTLKKY---GYKGAYMSKEWLKQPIF-IQSFAPTSLVYISNKTDSPKIFLIDDVDILTEDTNQSYSEITSDAYLNY 274 (391)
Q Consensus 199 ~~v~~~l~~~---~~~~~~~~~~~~~~~vi-i~Sf~~~~l~~l~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (391)
..+++..+++ ++. ++ +..-+.+.++++.+......+.+......
T Consensus 113 ~~~~~~a~~~~~~g~~------------vi~~~~~~~~~a~~~~~~gad~v~~~~~~~Gt-------------------- 160 (264)
T 1xm3_A 113 VETLKASEQLLEEGFI------------VLPYTSDDVVLARKLEELGVHAIMPGASPIGS-------------------- 160 (264)
T ss_dssp HHHHHHHHHHHHTTCC------------EEEEECSCHHHHHHHHHHTCSCBEECSSSTTC--------------------
T ss_pred HHHHHHHHHHHCCCeE------------EEEEcCCCHHHHHHHHHhCCCEEEECCcccCC--------------------
Q ss_pred HHhhhhhcCCCcceeeecCCCCCCCCHHHHHHHHHc-CCeEEEE-eecCcccccccccCCCchHHHHHHHHHcCccEEE
Q 016353 275 IKEYCVGIGPWKDTVVPVANNYSQTPTDLVARAHAL-DLQVHPY-TYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLF 351 (391)
Q Consensus 275 i~~~~~~i~~~~~~l~~~~~~~~~~~~~~v~~~~~~-Gl~V~~W-Tvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIi 351 (391)
.....+++.++.+++. +++|.+- .+.++++. ..+.+.|+|||+
T Consensus 161 --------------------~~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda--------------~~~~~~GAdgVi 205 (264)
T 1xm3_A 161 --------------------GQGILNPLNLSFIIEQAKVPVIVDAGIGSPKDA--------------AYAMELGADGVL 205 (264)
T ss_dssp --------------------CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHH--------------HHHHHTTCSEEE
T ss_pred --------------------CCCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHH--------------HHHHHcCCCEEE
No 57
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=27.26 E-value=56 Score=30.58 Aligned_cols=40 Identities=10% Similarity=-0.053 Sum_probs=30.8
Q ss_pred HHHHHHHHc--CCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEe-CCc
Q 016353 302 DLVARAHAL--DLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFT-DFP 355 (391)
Q Consensus 302 ~~v~~~~~~--Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiT-D~P 355 (391)
+.++.+++. +++|.+-++-+.++. +.+.+.|||+|+. ..|
T Consensus 150 ~~i~~lr~~~~~~~vi~g~v~t~e~A--------------~~a~~aGaD~I~v~~g~ 192 (351)
T 2c6q_A 150 EFVKDVRKRFPQHTIMAGNVVTGEMV--------------EELILSGADIIKVGIGP 192 (351)
T ss_dssp HHHHHHHHHCTTSEEEEEEECSHHHH--------------HHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHhcCCCeEEEEeCCCHHHH--------------HHHHHhCCCEEEECCCC
Confidence 467777777 788888888887776 5789999999944 444
No 58
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=26.46 E-value=1.8e+02 Score=26.58 Aligned_cols=85 Identities=11% Similarity=0.166 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHcCCeEEEEe-ecCcccccc----------ccc-------C--------CCc-h----HHHHHHHHHcCc
Q 016353 299 TPTDLVARAHALDLQVHPYT-YRNEHQFLH----------FNF-------L--------QDP-Y----REYDYWINKIGV 347 (391)
Q Consensus 299 ~~~~~v~~~~~~Gl~V~~WT-vn~~~~~~~----------~~~-------~--------~~~-~----~~~~~~l~~~GV 347 (391)
.+++-++.+|+.|.+|++|. +.+.+...+ ..+ + .++ . .....++.+.|+
T Consensus 57 ~t~~~i~~L~~~G~~viaYlSvGe~E~~R~y~~~~w~~~~~~~lg~~n~~W~ge~~vDi~~~~w~~i~~~rl~~~~~kG~ 136 (309)
T 2aam_A 57 YSPEEIKIMVDAGVVPVAYVNIGQAEDYRFYWKESWYTNTPEWLGEEDPAWPGNYFVKYWYNEWKEIVFSYLDRVIDQGF 136 (309)
T ss_dssp CCHHHHHHHHHTTCEEEEEEESSEEETTSTTCCTHHHHSCCTTEEEEETTEEEEEEECTTSHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhCCCEEEEEEecccccccchhhhhccccCCHHHhCccCCCCCCceEEecCCHHHHHHHHHHHHHHHHcCC
Confidence 47899999999999999995 222111110 000 0 011 1 112335678999
Q ss_pred cEEEeCCchhHHHHHhccCCCCCCchHHHHHhhhhhh
Q 016353 348 DGLFTDFPGSLHNYQELTSPVSKDNRASKLLHKIAVL 384 (391)
Q Consensus 348 dgIiTD~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (391)
|||.=|..+....+-. .+..+....++.++..+..|
T Consensus 137 DGvflDnvD~y~~~~~-~~g~~~~~~~~~~~~~i~~L 172 (309)
T 2aam_A 137 KGIYLDRIDSFEYWAQ-EGVISRRSAARKMINFVLEI 172 (309)
T ss_dssp SEEEEECTTHHHHHHH-HTSSCHHHHHHHHHHHHHHH
T ss_pred CeEeecccchhhhccc-cCCcchhhhHHHHHHHHHHH
Confidence 9999999988876642 23332223445555554444
No 59
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=25.98 E-value=3e+02 Score=23.26 Aligned_cols=43 Identities=7% Similarity=-0.017 Sum_probs=28.3
Q ss_pred CHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchh-HHHHHh
Q 016353 300 PTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGS-LHNYQE 363 (391)
Q Consensus 300 ~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~-l~~~~~ 363 (391)
++.-++.++++|+.+. .|++.+.. .++|.++.|..+. +..+.+
T Consensus 196 s~~Di~aA~~aG~~~i--~v~~~~~~-------------------~~ad~vi~~l~eL~~~~i~~ 239 (250)
T 4gib_A 196 ASAGIDAINSANMFSV--GVGNYENL-------------------KKANLVVDSTNQLKFEYIQE 239 (250)
T ss_dssp SHHHHHHHHHTTCEEE--EESCTTTT-------------------TTSSEEESSGGGCCHHHHHH
T ss_pred CHHHHHHHHHcCCEEE--EECChhHh-------------------ccCCEEECChHhCCHHHHHH
Confidence 5678999999999754 34555443 2678888876665 334433
No 60
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=25.97 E-value=2.2e+02 Score=24.88 Aligned_cols=28 Identities=4% Similarity=-0.034 Sum_probs=23.6
Q ss_pred CCCCHHHHHHHHHcCCeEEEEeecCccc
Q 016353 297 SQTPTDLVARAHALDLQVHPYTYRNEHQ 324 (391)
Q Consensus 297 ~~~~~~~v~~~~~~Gl~V~~WTvn~~~~ 324 (391)
...++...+.+++.|+.+..|+++..+.
T Consensus 146 G~~~~~~~~~l~~~G~~~v~w~~d~~Dw 173 (254)
T 2iw0_A 146 LSCDAGCQGDLGGLGYHIIDTNLDTKDY 173 (254)
T ss_dssp GCCCHHHHHHHHHTTCEEECCSEECCTT
T ss_pred CCCCHHHHHHHHHcCCeEEEeCCCCccc
Confidence 3457899999999999999999987654
No 61
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=25.32 E-value=92 Score=28.23 Aligned_cols=55 Identities=15% Similarity=0.032 Sum_probs=41.0
Q ss_pred CCCCHHHHHHHHHc---CCeEEEE-eecCcccccccccCCCchHHHHHHHHHcCccEEEeC-----C--chhHHHHHhcc
Q 016353 297 SQTPTDLVARAHAL---DLQVHPY-TYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD-----F--PGSLHNYQELT 365 (391)
Q Consensus 297 ~~~~~~~v~~~~~~---Gl~V~~W-Tvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD-----~--P~~l~~~~~~~ 365 (391)
.....++++++++. ++++.+- .+.+.+++ +.+.+.|+|+|+.. . |+.+.+..+.|
T Consensus 210 ~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda--------------~~ll~aGAD~VVVGSAav~d~~Pelv~e~a~~~ 275 (286)
T 3vk5_A 210 EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQV--------------TEYLDSGADYVGFAGALEQPDWRSALAEIAGRR 275 (286)
T ss_dssp SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHH--------------HHHHHTTCSEEEESGGGSSTTHHHHHHHHHC--
T ss_pred CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHH--------------HHHHHcCCCEEEECchhhcCCCHHHHHHHHHhC
Confidence 44578999998875 4677665 58999888 56888999999986 4 67777776554
No 62
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=24.88 E-value=50 Score=29.14 Aligned_cols=39 Identities=10% Similarity=-0.049 Sum_probs=34.0
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeC
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD 353 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD 353 (391)
..++..+|+.|+.|.+=.|.+.+++ ..+.++|+|.+.-.
T Consensus 212 ~~ii~~~~~~~~~viaeGVEt~~~~--------------~~l~~lG~~~~QG~ 250 (268)
T 3hv8_A 212 KGLIAELHEQQKLSIVPFVESASVL--------------ATLWQAGATYIQGY 250 (268)
T ss_dssp HHHHHHHHHTTCEEEECCCCSHHHH--------------HHHHHHTCSEECST
T ss_pred HHHHHHHHHcCCCEEEEeeCCHHHH--------------HHHHHcCCCEeccC
Confidence 4678889999999999999999988 58999999988655
No 63
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=24.82 E-value=69 Score=30.62 Aligned_cols=38 Identities=13% Similarity=0.079 Sum_probs=31.3
Q ss_pred HHHHHHHHHc-CCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEe
Q 016353 301 TDLVARAHAL-DLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFT 352 (391)
Q Consensus 301 ~~~v~~~~~~-Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiT 352 (391)
.++++.+++. |++|.+-++.+.+.. ..+.+.|+|+|+.
T Consensus 173 ~e~I~~ik~~~~i~Vi~g~V~t~e~A--------------~~a~~aGAD~I~v 211 (400)
T 3ffs_A 173 IRTLKEIKSKMNIDVIVGNVVTEEAT--------------KELIENGADGIKV 211 (400)
T ss_dssp HHHHHHHHTTCCCEEEEEEECSHHHH--------------HHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCeEEEeecCCHHHH--------------HHHHHcCCCEEEE
Confidence 4677888886 899988778777776 5788999999998
No 64
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=23.97 E-value=68 Score=30.19 Aligned_cols=37 Identities=8% Similarity=0.002 Sum_probs=30.7
Q ss_pred HHHHHHHHc--CCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEe
Q 016353 302 DLVARAHAL--DLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFT 352 (391)
Q Consensus 302 ~~v~~~~~~--Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiT 352 (391)
+.++.+++. ++.|.+-++.+.++. ..+.+.|||+|..
T Consensus 130 e~I~~ir~~~~~~~Vi~G~V~T~e~A--------------~~a~~aGaD~I~V 168 (361)
T 3r2g_A 130 KTLKSLRQLLGSRCIMAGNVATYAGA--------------DYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHTTCEEEEEEECSHHHH--------------HHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCeEEEcCcCCHHHH--------------HHHHHcCCCEEEE
Confidence 578888887 888888778888776 5788999999985
No 65
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=23.54 E-value=3.5e+02 Score=23.18 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCc
Q 016353 299 TPTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 299 ~~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
.+.+.++.+++.|..+.+- +.++.++ ..+.+.|+|.|.- ||
T Consensus 98 ~d~~v~~~ar~~g~~~i~G-v~t~~e~--------------~~A~~~Gad~vk~-Fp 138 (224)
T 1vhc_A 98 LNPKIVKLCQDLNFPITPG-VNNPMAI--------------EIALEMGISAVKF-FP 138 (224)
T ss_dssp CCHHHHHHHHHTTCCEECE-ECSHHHH--------------HHHHHTTCCEEEE-TT
T ss_pred CCHHHHHHHHHhCCCEEec-cCCHHHH--------------HHHHHCCCCEEEE-ee
Confidence 4788899999999988774 6667766 4678899999988 88
No 66
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=22.56 E-value=86 Score=29.31 Aligned_cols=41 Identities=12% Similarity=0.095 Sum_probs=32.4
Q ss_pred CHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCc
Q 016353 300 PTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 300 ~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
+++.++.+++.|+.|++ .+.+.++. ..+.+.|+|+|+-+-|
T Consensus 134 ~~~~i~~~~~~g~~v~~-~v~t~~~a--------------~~a~~~GaD~i~v~g~ 174 (369)
T 3bw2_A 134 DREVIARLRRAGTLTLV-TATTPEEA--------------RAVEAAGADAVIAQGV 174 (369)
T ss_dssp CHHHHHHHHHTTCEEEE-EESSHHHH--------------HHHHHTTCSEEEEECT
T ss_pred cHHHHHHHHHCCCeEEE-ECCCHHHH--------------HHHHHcCCCEEEEeCC
Confidence 57899999999998776 56666555 4678899999998655
No 67
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=22.55 E-value=73 Score=29.31 Aligned_cols=41 Identities=15% Similarity=0.248 Sum_probs=32.5
Q ss_pred CHHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCc
Q 016353 300 PTDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 300 ~~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
++.+++.+++.|++|.+ .+.+.+.. ..+.+.|+|+|+.+-+
T Consensus 113 p~~~~~~l~~~g~~v~~-~v~s~~~a--------------~~a~~~GaD~i~v~g~ 153 (326)
T 3bo9_A 113 PTKYIRELKENGTKVIP-VVASDSLA--------------RMVERAGADAVIAEGM 153 (326)
T ss_dssp CHHHHHHHHHTTCEEEE-EESSHHHH--------------HHHHHTTCSCEEEECT
T ss_pred cHHHHHHHHHcCCcEEE-EcCCHHHH--------------HHHHHcCCCEEEEECC
Confidence 58899999999998886 55555555 4678899999999754
No 68
>3gfz_A Klebsiella pneumoniae BLRP1; TIM-barrel, EAL domain, BLUF domain, hydrolase, signaling PR; HET: C2E FMN; 2.05A {Klebsiella pneumoniae subsp} PDB: 3gfy_A* 3gfx_A* 3gg0_A* 3gg1_A* 2kb2_A*
Probab=22.41 E-value=66 Score=30.69 Aligned_cols=39 Identities=13% Similarity=0.265 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeC
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD 353 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD 353 (391)
..+++.+|..|+.|.+=.|.+.++. ..+.++|+|.+.--
T Consensus 351 ~~ii~la~~lg~~viAEGVEt~~q~--------------~~l~~lG~d~~QGy 389 (413)
T 3gfz_A 351 ASVVRCCEDLGITVVAEGVETLEEW--------------CWLQSVGIRLFQGF 389 (413)
T ss_dssp HHHHHHHHHHTCEEEEECCCSHHHH--------------HHHHHTTCCEEEST
T ss_pred HHHHHHHHHcCCEEEEecCCCHHHH--------------HHHHHcCCCEEEEC
Confidence 5788899999999999999999988 58999999998765
No 69
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=22.21 E-value=1.1e+02 Score=28.13 Aligned_cols=68 Identities=12% Similarity=0.090 Sum_probs=46.2
Q ss_pred HHHHHHHHHcCCeEEEEee--cCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhHHHHHhccCCCCCCchHHHHH
Q 016353 301 TDLVARAHALDLQVHPYTY--RNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSLHNYQELTSPVSKDNRASKLL 378 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTv--n~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l~~~~~~~~~~~~~~~~~~~~ 378 (391)
...++.+|++|+.+.+++- .++... ..+..+|++++ +=.|+++...+......+ ..-++.+.
T Consensus 237 ~~vv~aar~aG~~vgvcge~~~dp~~~--------------~~l~~lG~~~~-si~p~~i~~~~~~~~~~~-~~~~~~~~ 300 (324)
T 2xz9_A 237 KMVIDAAHKEGKFAAMCGEMAGDPLAA--------------VILLGLGLDEF-SMSATSIPEIKNIIRNVE-YEKAKEIA 300 (324)
T ss_dssp HHHHHHHHHTTCEEEECSGGGGCHHHH--------------HHHHHHTCCEE-EECGGGHHHHHHHHTTSC-HHHHHHHH
T ss_pred HHHHHHHHHHCCceeecCccCCCHHHH--------------HHHHHCCCCEE-EEChhHHHHHHHHHHHcC-HHHHHHHH
Confidence 4567888999999977542 233322 46889999995 557888877777777664 35566666
Q ss_pred hhhhhh
Q 016353 379 HKIAVL 384 (391)
Q Consensus 379 ~~~~~~ 384 (391)
.++..+
T Consensus 301 ~~~l~~ 306 (324)
T 2xz9_A 301 EKALNM 306 (324)
T ss_dssp HHHHTC
T ss_pred HHHHcC
Confidence 666543
No 70
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=22.01 E-value=1.9e+02 Score=27.57 Aligned_cols=54 Identities=20% Similarity=0.082 Sum_probs=34.4
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccC-CCchHHHHHHHHHcCccEEEeCCc
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFL-QDPYREYDYWINKIGVDGLFTDFP 355 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~-~~~~~~~~~~l~~~GVdgIiTD~P 355 (391)
+.+++++|++|+++..|.-.-++.....--. +-... ..+.+.++|||+|=.|+-
T Consensus 80 ~~l~~~i~~~Glk~Giw~~~g~~~c~~~Pgs~~~~~~-d~~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 80 DGLAKKVHALGLKLGIYSTAGTATCAGYPASLGYEDV-DAADFADWGVDYLKYDNC 134 (417)
T ss_dssp HHHHHHHHHTTCEEEEEEESSSBCTTSCBCCTTCHHH-HHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCchhccCcchHhHHHH-HHHHHHHcCCCEEEECCC
Confidence 6899999999999999985433221100000 01111 234577899999999975
No 71
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=21.50 E-value=1.8e+02 Score=27.21 Aligned_cols=54 Identities=19% Similarity=0.088 Sum_probs=33.7
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccc-cCCCchHHHHHHHHHcCccEEEeCC
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFN-FLQDPYREYDYWINKIGVDGLFTDF 354 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~-~~~~~~~~~~~~l~~~GVdgIiTD~ 354 (391)
+.+++++|++|++...|.-.......... ...+-.+..-+.+.++|||.|=.|+
T Consensus 86 k~ladyih~~Glk~Giy~~~~~~~c~g~~~~~~~~~~~da~~~a~wGvdylK~D~ 140 (400)
T 4do4_A 86 PFLADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLDG 140 (400)
T ss_dssp HHHHHHHHHTTCEEEEEEEBSSBCTTSCBCBCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHCCceEEEecCCCCcccCCCCchhHhHHHHHHHHHHHhCCceEeecc
Confidence 68999999999999999743322110000 0111122223457789999999885
No 72
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=21.26 E-value=71 Score=28.43 Aligned_cols=26 Identities=27% Similarity=0.267 Sum_probs=22.3
Q ss_pred chhHHHHHHHHHHcCCCEEEeeeEEc
Q 016353 57 PEETAAAYMRAIEEGADFIETDILAS 82 (391)
Q Consensus 57 pENTl~Af~~A~~~Gad~vE~DV~lT 82 (391)
+|++..-.+...+.|+|+||+|+-.+
T Consensus 30 ~~~~~~~~~~l~~~GaD~ieig~P~s 55 (268)
T 1qop_A 30 IEQSLKIIDTLIDAGADALELGVPFS 55 (268)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCS
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 48999888888899999999988553
No 73
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=20.96 E-value=44 Score=29.24 Aligned_cols=27 Identities=22% Similarity=0.363 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHHcCCCEEEeeeEEcCCCeEE
Q 016353 58 EETAAAYMRAIEEGADFIETDILASKDGVLI 88 (391)
Q Consensus 58 ENTl~Af~~A~~~Gad~vE~DV~lTkDg~~V 88 (391)
-|--.+.+.+ +.|+|++++||. ||..|
T Consensus 13 ~~l~~~i~~~-~~gad~lHvDvm---DG~fv 39 (231)
T 3ctl_A 13 LKFKEQIEFI-DSHADYFHIDIM---DGHFV 39 (231)
T ss_dssp GGHHHHHHHH-HTTCSCEEEEEE---CSSSS
T ss_pred hhHHHHHHHH-HcCCCEEEEEEE---eCccC
Confidence 3556677788 999999999987 89877
No 74
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=20.94 E-value=60 Score=30.87 Aligned_cols=39 Identities=21% Similarity=0.325 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeC
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTD 353 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD 353 (391)
..++..+|..|+.|.+=.|.+.+++ ..+.++|+|.+.--
T Consensus 383 ~~i~~~a~~l~~~viaeGVEt~~~~--------------~~l~~~g~~~~QG~ 421 (430)
T 3pjx_A 383 EAIQRAAHSIDLPLIAERVETEGEL--------------SVIREMGLYGVQGQ 421 (430)
T ss_dssp HHHHHHHHTTTCCEEECCCCCHHHH--------------HHHHHTTCSEEESG
T ss_pred HHHHHHHHHCCCcEEEEecCCHHHH--------------HHHHHcCCCeeccc
Confidence 5677889999999999999999988 68999999988653
No 75
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=20.75 E-value=57 Score=30.72 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCC
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDF 354 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~ 354 (391)
..++..+|+.|+.|.+-.|.+.+++ ..+.++|+|.+.--+
T Consensus 336 ~~i~~~a~~l~~~vvaEGVEt~~~~--------------~~l~~~g~~~~QGy~ 375 (400)
T 3sy8_A 336 SSVVALAQALGISLVVEGVESDEQR--------------VRLIELGCSIAQGYL 375 (400)
T ss_dssp HHHHHHHHHHTCEEEECCCCCHHHH--------------HHHHHHTCCEECBTT
T ss_pred HHHHHHHHHcCCeEEEecCCcHHHH--------------HHHHHcCCCEEEcCe
Confidence 5678889999999999999999988 589999999887763
No 76
>3t7a_A Inositol pyrophosphate kinase; ATP-grAsp fold, transferase; HET: ADP; 1.70A {Homo sapiens} PDB: 3t9a_A* 3t9b_A* 3t9c_A* 3t9d_A* 3t9e_A* 3t9f_A* 4gb4_A* 4hn2_A* 3t54_A* 3t99_A*
Probab=20.62 E-value=1.2e+02 Score=27.93 Aligned_cols=42 Identities=12% Similarity=0.126 Sum_probs=34.8
Q ss_pred ecCCCCC----CCchhHHHHHHHHHHcCCCEEEeeeEEcCCCeEEE
Q 016353 48 AHRGSNG----EFPEETAAAYMRAIEEGADFIETDILASKDGVLIC 89 (391)
Q Consensus 48 aHRG~~~----~~pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~Vv 89 (391)
.|||+.. .-+|--..|.+.|...|.+..=+|+..+.+|-+|+
T Consensus 239 ~~gG~~~~~v~Lt~eek~iA~kaa~a~G~~v~GVDlLrs~~~~~V~ 284 (330)
T 3t7a_A 239 SEGKEVRYPVILNAREKLIAWKVCLAFKQTVCGFDLLRANGQSYVC 284 (330)
T ss_dssp TTSCBCCEECCCCHHHHHHHHHHHHHTTBSEEEEEEEEETTEEEEE
T ss_pred CCCCceeeeecCCHHHHHHHHHHHHHhCCceEEEEEEEECCccEEE
Confidence 4888754 56788899999999999999999999997765544
No 77
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=20.56 E-value=53 Score=28.92 Aligned_cols=29 Identities=17% Similarity=0.180 Sum_probs=23.9
Q ss_pred chhHHHHHHHHHHcCCCEEEeeeEEcCCCeEE
Q 016353 57 PEETAAAYMRAIEEGADFIETDILASKDGVLI 88 (391)
Q Consensus 57 pENTl~Af~~A~~~Gad~vE~DV~lTkDg~~V 88 (391)
+-|-..+.+.+.+.|+|++++||. ||+.|
T Consensus 25 ~~~l~~~i~~~~~~gad~lhvDvm---DG~fv 53 (237)
T 3cu2_A 25 WLQLNEEVTTLLENQINVLHFDIA---DGQFS 53 (237)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEEEE---BSSSS
T ss_pred cccHHHHHHHHHHcCCCEEEEEEe---cCccc
Confidence 346677888888999999999995 77766
No 78
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=20.12 E-value=1e+02 Score=27.49 Aligned_cols=44 Identities=2% Similarity=-0.063 Sum_probs=34.2
Q ss_pred HHHHHHHHHcCCeEEEEeecCcccccccccCCCchHHHHHHHHHcCccEEEeCCchhH
Q 016353 301 TDLVARAHALDLQVHPYTYRNEHQFLHFNFLQDPYREYDYWINKIGVDGLFTDFPGSL 358 (391)
Q Consensus 301 ~~~v~~~~~~Gl~V~~WTvn~~~~~~~~~~~~~~~~~~~~~l~~~GVdgIiTD~P~~l 358 (391)
...++.+|+.|+.|....--+++++ ....+.|+|.|--..=.-+
T Consensus 114 ~~~i~~L~~~GIrVSLFIDpd~~qi--------------~aA~~~GAd~IELhTG~YA 157 (260)
T 3o6c_A 114 KQSIEKLQNANIEVSLFINPSLEDI--------------EKSKILKAQFIELHTGHYA 157 (260)
T ss_dssp HHHHHHHHHTTCEEEEEECSCHHHH--------------HHHHHTTCSEEEECCHHHH
T ss_pred HHHHHHHHHCCCEEEEEeCCCHHHH--------------HHHHHhCCCEEEEechHhh
Confidence 6789999999999998886555555 5688899999876544333
No 79
>3v1h_A 1-phosphatidylinositol phosphodiesterase; PI-cation, TIM barrel, phospholipase, lyase; HET: INS; 1.90A {Staphylococcus aureus subsp} PDB: 4f2b_A* 4f2u_A* 4f2t_A 3v18_A 3v16_A*
Probab=20.12 E-value=73 Score=29.21 Aligned_cols=29 Identities=28% Similarity=0.548 Sum_probs=25.4
Q ss_pred HHHHHHcCCCEEEeeeEEcCCCeEEEEcC
Q 016353 64 YMRAIEEGADFIETDILASKDGVLICHHD 92 (391)
Q Consensus 64 f~~A~~~Gad~vE~DV~lTkDg~~Vv~HD 92 (391)
+..=++.|+++++++|+..+|+.+.++|.
T Consensus 51 i~~QL~~GVR~lDlRv~~~~~~~l~~~Hg 79 (306)
T 3v1h_A 51 YLTQMKSGVRFFDIRGRASADNMISVHHG 79 (306)
T ss_dssp HHHHHHTTCCEEEEEEEEEETTEEEEEET
T ss_pred HHHHHHhCcceEEEEeeecCCCcEEEEcc
Confidence 55666779999999999999999999995
Done!