BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016357
(391 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LKA5|UMP1_ARATH Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis
thaliana GN=At3g15000 PE=1 SV=1
Length = 395
Score = 323 bits (828), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 217/398 (54%), Positives = 250/398 (62%), Gaps = 57/398 (14%)
Query: 1 MATQIFSRMFLSNPTATKALASLLSRSFSTTATTIKPSSRSLPLLFLNRFRPLSTAVR-F 59
MAT SR L P K+L+ L +RSF+++A K + SL L+R RPL A
Sbjct: 1 MATHTISRSILCRPA--KSLSFLFTRSFASSAPLAKSPASSL----LSRSRPLVAAFSSV 54
Query: 60 GSGGIVTGPSARGMSTRPATASLNDSSPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDP 119
GG+V S +G+ST+ ++SLND +PNWSNRPPKETILLDGCDFEHWLVV+E P+G+P
Sbjct: 55 FRGGLV---SVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEP 111
Query: 120 TRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWV 179
TRDEIID YIKTLA + G EDEARMKIYSVST+ YYAFGALV E+ S+KLKEL VRWV
Sbjct: 112 TRDEIIDSYIKTLAQIV-GSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWV 170
Query: 180 LPDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNDRPRSYDRSRNF 239
LPDSYLDV+NKDYGGEPFI+G+AVPYDPKYHEEW+RNNARANERNRRNDRPR+ DRSRNF
Sbjct: 171 LPDSYLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNF 230
Query: 240 ERRRENM-----QNRNFQNQGMPNHAPNMSGMPPNNVPSSSNMSPNMGSMSQNN------ 288
ERRRENM R P S PP ++ S+ P+MG
Sbjct: 231 ERRRENMAGGPPPQRPPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMG 290
Query: 289 -------LGGMPQNNYGGTPPPNNYGGMPPPNNYAGVPPPQNNYGGAPPPQN-------- 333
G PQNN GG PP NYGG PPP NYGGAPP N
Sbjct: 291 GPRHPPPYGAPPQNNMGGPRPPQNYGGTPPP-----------NYGGAPPANNMGGAPPPN 339
Query: 334 -------SYGGALPPQNKYGGTPPPQNNYGGTAATAEQ 364
YG PPQ YGG PP NNY + +Q
Sbjct: 340 YGGGPPPQYGAVPPPQ--YGGAPPQNNNYQQQGSGMQQ 375
>sp|Q38732|DAG_ANTMA DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1
Length = 230
Score = 134 bits (338), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/142 (48%), Positives = 94/142 (66%), Gaps = 4/142 (2%)
Query: 97 TILLDGCDFEHWLVVMEKPEG-DPTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHY 155
TI+L GCD+ HWL+VME P+ PTR+++ID Y+ TLATV G +EA+ +Y+ ST Y
Sbjct: 78 TIMLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVL-GSMEEAKKNMYAFSTTTY 136
Query: 156 YAFGALVDEETSYKLKELPGVRWVLPDSYLDVKNKDYGGEPFINGQAVPYD-PKYHEEWV 214
F V EETS K K LPGV WVLPDSY+DVKNKDYGG+ ++NG+ +P P Y +
Sbjct: 137 TGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIPCQYPTYQPKQS 196
Query: 215 RNNA-RANERNRRNDRPRSYDR 235
R++ ++ R+ D P + R
Sbjct: 197 RSSKYKSKAYVRQRDGPPAEQR 218
>sp|Q4WJA1|MCA1A_ASPFU Metacaspase-1A OS=Neosartorya fumigata (strain ATCC MYA-4609 /
Af293 / CBS 101355 / FGSC A1100) GN=casA PE=3 SV=3
Length = 413
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 294 QNNYGGTPPPNNY-GGMPPPNNYA-GVPPPQNNYGGAPPPQNSYGGALPPQNKYGGTPPP 351
Q++YGG P Y PPPN Y G P PQ Y GAPPP N YG P + YG PPP
Sbjct: 8 QSSYGGGYPGQAYREQHPPPNPYGYGQPSPQPGY-GAPPPHNGYG---QPPSGYGQPPPP 63
Query: 352 QNN--YGG 357
N YGG
Sbjct: 64 TGNAVYGG 71
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 293 PQNNYGGTPPPNNYGGMPPPNNYAGVPPPQNN--YGGAPPPQNSY 335
PQ YG PP N YG PP+ Y PPP N YGG P N Y
Sbjct: 37 PQPGYGAPPPHNGYG--QPPSGYGQPPPPTGNAVYGGRQPGMNQY 79
>sp|B0XPP3|MCA1A_ASPFC Metacaspase-1A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=casA PE=3 SV=2
Length = 413
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 294 QNNYGGTPPPNNY-GGMPPPNNYA-GVPPPQNNYGGAPPPQNSYGGALPPQNKYGGTPPP 351
Q++YGG P Y PPPN Y G P PQ Y GAPPP N YG P + YG PPP
Sbjct: 8 QSSYGGGYPGQAYREQHPPPNPYGYGQPSPQPGY-GAPPPHNGYG---QPPSGYGQPPPP 63
Query: 352 QNN--YGG 357
N YGG
Sbjct: 64 TGNAVYGG 71
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 293 PQNNYGGTPPPNNYGGMPPPNNYAGVPPPQNN--YGGAPPPQNSY 335
PQ YG PP N YG PP+ Y PPP N YGG P N Y
Sbjct: 37 PQPGYGAPPPHNGYG--QPPSGYGQPPPPTGNAVYGGRQPGMNQY 79
>sp|A7TKW4|SLA1_VANPO Actin cytoskeleton-regulatory complex protein SLA1 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=SLA1 PE=3
SV=1
Length = 1202
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 282 GSMSQNNLGGM-PQNNYGGTPPPNNYGGMPPPNNYAGVPPPQNNYGGAPPPQNSYGGALP 340
G M+ N GGM P N GG P N GGM P N G+ P N GG Q + G +
Sbjct: 997 GLMAANTTGGMMPLNTTGGMMPLNTTGGMIPLNTTGGM-MPMNTTGGVMSLQRT--GGMM 1053
Query: 341 PQNKYG 346
PQ +G
Sbjct: 1054 PQTSFG 1059
>sp|A9KNW4|IF2_CLOPH Translation initiation factor IF-2 OS=Clostridium phytofermentans
(strain ATCC 700394 / DSM 18823 / ISDg) GN=infB PE=3
SV=1
Length = 1131
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 294 QNNYGGTPPPN--NYGGMPPPNNYAG--VPPPQNNYGGAPPPQNSYGGALPPQNKYGGTP 349
Q +YG P +YG P G P Q YGG P Q SYGG Q Y G
Sbjct: 380 QGSYGDRRPQGQGSYGDRPQGQGNFGDRRPQGQGGYGGRPQGQGSYGGRPQGQGGYAGRS 439
Query: 350 PPQNNYGG 357
Q ++GG
Sbjct: 440 QGQGSFGG 447
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 38/85 (44%), Gaps = 10/85 (11%)
Query: 253 NQGMPNHAPNMSGMPPNNVPSSSNMSP--NMGSMSQNNLGGM----PQNNYGGTPPPNNY 306
NQ +P + PN G P N+ + P + GS++Q N M PQ Y PP +
Sbjct: 335 NQSVPRY-PNAVGFPSNSGQGLVHQQPIHSSGSLNQMNTQTMHPSQPQGTYASPPPMSPM 393
Query: 307 GGMPPPNNYAGVPPPQNNYGGAPPP 331
M P AG PPPQ G A P
Sbjct: 394 KAMSNP---AGTPPPQVRPGSAGMP 415
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.130 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 176,364,248
Number of Sequences: 539616
Number of extensions: 9273765
Number of successful extensions: 47354
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 919
Number of HSP's that attempted gapping in prelim test: 28136
Number of HSP's gapped (non-prelim): 9991
length of query: 391
length of database: 191,569,459
effective HSP length: 119
effective length of query: 272
effective length of database: 127,355,155
effective search space: 34640602160
effective search space used: 34640602160
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)