Query         016357
Match_columns 391
No_of_seqs    168 out of 316
Neff          3.4 
Searched_HMMs 29240
Date          Mon Mar 25 12:13:42 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016357.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016357hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2w2n_P Proprotein convertase s  99.4 5.8E-14   2E-18  117.4   5.4   76  106-187    38-113 (114)
  2 2qtw_A Proprotein convertase s  99.0 3.1E-10 1.1E-14   96.8   6.3   76  106-187    48-123 (124)
  3 3cnq_P Subtilisin BPN'; unclea  99.0 6.7E-10 2.3E-14   85.9   6.1   68  106-188     9-76  (80)
  4 1v5i_B POIA1, IA-1=serine prot  98.2 2.9E-06   1E-10   65.9   7.7   70  106-187     3-75  (76)
  5 2p4e_P Proprotein convertase s  97.6 7.6E-05 2.6E-09   79.3   7.2   75  107-187    77-151 (692)
  6 3t41_A Epidermin leader peptid  97.3 0.00022 7.4E-09   70.1   5.3   93   96-214    35-128 (471)
  7 2z2z_A TK-subtilisin precursor  96.2  0.0031   1E-07   61.2   4.2   43  145-188    24-66  (395)
  8 3afg_A Subtilisin-like serine   95.9  0.0055 1.9E-07   62.5   4.4   43  145-188    60-113 (539)
  9 2z30_B TK-subtilisin; thermoco  94.4   0.025 8.4E-07   42.6   3.1   45  141-186    19-63  (65)
 10 2z73_A Rhodopsin; visual pigme  94.4  0.0069 2.3E-07   56.9   0.0    8  206-213   319-326 (448)
 11 2ko1_A CTR148A, GTP pyrophosph  21.7 1.1E+02  0.0038   22.1   4.2   18  165-182    61-78  (88)
 12 3e96_A Dihydrodipicolinate syn  20.8 1.2E+02   0.004   28.7   5.2   51  119-183   120-170 (316)

No 1  
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=99.44  E-value=5.8e-14  Score=117.45  Aligned_cols=76  Identities=18%  Similarity=0.138  Sum_probs=64.7

Q ss_pred             eEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCchhhhhhheeeecCcceeeeeecCHHHHHHhcCCCCeEEEcCCCcc
Q 016357          106 EHWLVVMEKPEGDPTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDSYL  185 (391)
Q Consensus       106 ehYIVyMgkP~g~~t~~~~idsH~q~LASVL~GSeEeAk~sIyYSYthsfnGFAAkLTeEEA~kLs~lPGVVSVfPDs~l  185 (391)
                      ..|||+|++..   + .+.++.|+++|.+++ ++ +.+...|+|+|++.|+||+|+||++++++|+++|+|++|+||..+
T Consensus        38 ~~YIV~lk~~~---~-~~~~~~h~~~l~s~~-~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v  111 (114)
T 2w2n_P           38 GTYVVVLKEET---H-LSQSERTARRLQAQA-AR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV  111 (114)
T ss_dssp             EEEEEEECTTC---C-HHHHHHHHHHHHHHH-HH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred             CcEEEEECCCC---C-HHHHHHHHHHHHHHh-hh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceE
Confidence            58999997632   2 345679999999999 55 336678999999999999999999999999999999999999887


Q ss_pred             cC
Q 016357          186 DV  187 (391)
Q Consensus       186 ~L  187 (391)
                      ++
T Consensus       112 ~~  113 (114)
T 2w2n_P          112 FA  113 (114)
T ss_dssp             EE
T ss_pred             ec
Confidence            53


No 2  
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=99.02  E-value=3.1e-10  Score=96.75  Aligned_cols=76  Identities=18%  Similarity=0.133  Sum_probs=58.5

Q ss_pred             eEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCchhhhhhheeeecCcceeeeeecCHHHHHHhcCCCCeEEEcCCCcc
Q 016357          106 EHWLVVMEKPEGDPTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDSYL  185 (391)
Q Consensus       106 ehYIVyMgkP~g~~t~~~~idsH~q~LASVL~GSeEeAk~sIyYSYthsfnGFAAkLTeEEA~kLs~lPGVVSVfPDs~l  185 (391)
                      ..|||+|.+.-.    ...++.|++.|.+++ .. ......|.|+|++.|+||+|+|+++++++|+++|+|++|+||..+
T Consensus        48 ~~YIV~~K~~~~----~~~~~~~~~~l~~~~-~~-r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v  121 (124)
T 2qtw_A           48 GTYVVVLKEETH----LSQSERTARRLQAQA-AR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSV  121 (124)
T ss_dssp             EEEEEEECTTCC----HHHHHHHHHHHHHHH-HH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEE
T ss_pred             CCEEEEECCCCC----HHHHHHHHHHHHHHH-hh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceE
Confidence            479999976322    235667777777654 10 001237999999999999999999999999999999999999876


Q ss_pred             cC
Q 016357          186 DV  187 (391)
Q Consensus       186 ~L  187 (391)
                      +.
T Consensus       122 ~a  123 (124)
T 2qtw_A          122 FA  123 (124)
T ss_dssp             EE
T ss_pred             ec
Confidence            53


No 3  
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.97  E-value=6.7e-10  Score=85.86  Aligned_cols=68  Identities=16%  Similarity=0.086  Sum_probs=52.1

Q ss_pred             eEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCchhhhhhheeeecCcceeeeeecCHHHHHHhcCCCCeEEEcCCCcc
Q 016357          106 EHWLVVMEKPEGDPTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDSYL  185 (391)
Q Consensus       106 ehYIVyMgkP~g~~t~~~~idsH~q~LASVL~GSeEeAk~sIyYSYthsfnGFAAkLTeEEA~kLs~lPGVVSVfPDs~l  185 (391)
                      ..|||+|.+...   .+.+   |..++. -+       ..+|+|+|++ |+||+|+|+++++++|+++|+|++|.||..+
T Consensus         9 ~~YIV~~k~~~~---~~~~---~~~~~~-~~-------g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v   73 (80)
T 3cnq_P            9 KKYIVGFKQGFK---SCAK---KEDVIS-EK-------GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLY   73 (80)
T ss_dssp             CEEEEEECTTCC---SHHH---HHHHHH-TT-------TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEE
T ss_pred             CCEEEEECCCCC---hHHH---HHHHHH-Hc-------CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEE
Confidence            579999976433   1211   223222 22       2469999998 9999999999999999999999999999988


Q ss_pred             cCC
Q 016357          186 DVK  188 (391)
Q Consensus       186 ~L~  188 (391)
                      ++.
T Consensus        74 ~~~   76 (80)
T 3cnq_P           74 RAL   76 (80)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            764


No 4  
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.25  E-value=2.9e-06  Score=65.94  Aligned_cols=70  Identities=11%  Similarity=0.134  Sum_probs=56.3

Q ss_pred             eEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCchhhhhhheeee-cCcceeeeeecCHHHHHHhcCC--CCeEEEcCC
Q 016357          106 EHWLVVMEKPEGDPTRDEIIDRYIKTLATVFDGREDEARMKIYSVS-TKHYYAFGALVDEETSYKLKEL--PGVRWVLPD  182 (391)
Q Consensus       106 ehYIVyMgkP~g~~t~~~~idsH~q~LASVL~GSeEeAk~sIyYSY-thsfnGFAAkLTeEEA~kLs~l--PGVVSVfPD  182 (391)
                      ..|||.|.+.    ...+.++.|.+++...- |       .|.|.| ...|+||+|.|++++++.|+..  |.|..|-+|
T Consensus         3 ~sYIV~lk~~----~~~~~~~~~~~~~~~~g-g-------~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D   70 (76)
T 1v5i_B            3 GKFIVIFKND----VSEDKIRETKDEVIAEG-G-------TITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEED   70 (76)
T ss_dssp             EEEEEEECTT----CCHHHHHHHHHHHHHHT-C-------CCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEEC
T ss_pred             ceEEEEECCC----CCHHHHHHHHHHHHhhC-C-------ceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCC
Confidence            4799999542    23446778887776643 3       488999 5899999999999999999999  889999999


Q ss_pred             CcccC
Q 016357          183 SYLDV  187 (391)
Q Consensus       183 s~l~L  187 (391)
                      ..+.+
T Consensus        71 ~~v~~   75 (76)
T 1v5i_B           71 HVAHA   75 (76)
T ss_dssp             CEEEC
T ss_pred             cEEeC
Confidence            87654


No 5  
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=97.61  E-value=7.6e-05  Score=79.33  Aligned_cols=75  Identities=19%  Similarity=0.150  Sum_probs=54.9

Q ss_pred             EEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCchhhhhhheeeecCcceeeeeecCHHHHHHhcCCCCeEEEcCCCccc
Q 016357          107 HWLVVMEKPEGDPTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDSYLD  186 (391)
Q Consensus       107 hYIVyMgkP~g~~t~~~~idsH~q~LASVL~GSeEeAk~sIyYSYthsfnGFAAkLTeEEA~kLs~lPGVVSVfPDs~l~  186 (391)
                      .|||.|.+...   .+ ..+.|++.|.+.+ ... ....+|+|+|++.|+||+++|+++++++|+++|+|.+|.||..+.
T Consensus        77 ~YIV~lk~~~~---~~-~~~~~~~~l~a~~-~~~-g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~  150 (692)
T 2p4e_P           77 TYVVVLKEETH---LS-QSERTARRLQAQA-ARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVF  150 (692)
T ss_dssp             EEEEEECTTCC---HH-HHHHHHHHHHHHH-HHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEE
T ss_pred             cEEEEECCCCC---HH-HHHHHHHHHHHHH-hhc-ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccc
Confidence            89999976332   22 3444555554433 000 012368999999999999999999999999999999999998664


Q ss_pred             C
Q 016357          187 V  187 (391)
Q Consensus       187 L  187 (391)
                      +
T Consensus       151 ~  151 (692)
T 2p4e_P          151 A  151 (692)
T ss_dssp             E
T ss_pred             c
Confidence            4


No 6  
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=97.28  E-value=0.00022  Score=70.14  Aligned_cols=93  Identities=5%  Similarity=0.131  Sum_probs=57.3

Q ss_pred             ccccccCCCceEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCCchhhhhhheeeecCcceeeeeecCHHHHHHhcC-CC
Q 016357           96 ETILLDGCDFEHWLVVMEKPEGDPTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKE-LP  174 (391)
Q Consensus        96 ~~~L~~gcd~ehYIVyMgkP~g~~t~~~~idsH~q~LASVL~GSeEeAk~sIyYSYthsfnGFAAkLTeEEA~kLs~-lP  174 (391)
                      +.+.+.|-+-+.|||.+...      +    .    +.+++    ++...+++|.|.. |+||+++|+++++++|++ +|
T Consensus        35 ~~l~~~~~~~~~yiv~~~~~------~----~----~~~~~----~~~g~~v~~~~~~-~~~~~~~~~~~~~~~L~~~~p   95 (471)
T 3t41_A           35 ENLYFQGSEELYYSVEYKNT------A----T----FNKLV----KKKSLNVVYNIPE-LHVAQIKMTKMHANALANYKN   95 (471)
T ss_dssp             --------CCEEEEEEESCH------H----H----HHHHH----HHHTCEEEEEEGG-GTEEEEEECHHHHHHHHTCTT
T ss_pred             ccceecCCCceEEEEEcCCH------H----H----HHHHH----HhCCCEEEEecCC-ccEEEEEeCHHHHHHHHhcCC
Confidence            34456677777899954331      1    1    22233    2333557888854 999999999999999999 99


Q ss_pred             CeEEEcCCCcccCCCCCCCCCcccccccccCCchhhHHHH
Q 016357          175 GVRWVLPDSYLDVKNKDYGGEPFINGQAVPYDPKYHEEWV  214 (391)
Q Consensus       175 GVVSVfPDs~l~L~nKdYgge~f~ng~~v~~~p~~~~~~~  214 (391)
                      +|++|.|+..+++....-       -...+.+|.+...|-
T Consensus        96 ~V~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~w~  128 (471)
T 3t41_A           96 DIKYINATCSTCITSEKT-------IDRTSNESLFSRQWD  128 (471)
T ss_dssp             TEEEEEECCSSCBCCCCC-------CCC---CCSCCCCHH
T ss_pred             CCcEEEecceeccccccc-------cccCCCCcccccccc
Confidence            999999999887754221       134456677666663


No 7  
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=96.22  E-value=0.0031  Score=61.19  Aligned_cols=43  Identities=26%  Similarity=0.054  Sum_probs=38.9

Q ss_pred             hhheeeecCcceeeeeecCHHHHHHhcCCCCeEEEcCCCcccCC
Q 016357          145 MKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDSYLDVK  188 (391)
Q Consensus       145 ~sIyYSYthsfnGFAAkLTeEEA~kLs~lPGVVSVfPDs~l~L~  188 (391)
                      .++++.|.. |+||+++|+++++++|+++|+|.+|.||..+++.
T Consensus        24 ~~v~~~~~~-~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~   66 (395)
T 2z2z_A           24 GHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLL   66 (395)
T ss_dssp             CEEEEECSS-SSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEEC
T ss_pred             CEEEEEecc-CCEEEEEECHHHHHHHHcCCCceEEEEeeeeccc
Confidence            457888875 9999999999999999999999999999988764


No 8  
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=95.88  E-value=0.0055  Score=62.55  Aligned_cols=43  Identities=19%  Similarity=0.198  Sum_probs=38.3

Q ss_pred             hhheeeecCcceeeeeecCHHHHHHh-----------cCCCCeEEEcCCCcccCC
Q 016357          145 MKIYSVSTKHYYAFGALVDEETSYKL-----------KELPGVRWVLPDSYLDVK  188 (391)
Q Consensus       145 ~sIyYSYthsfnGFAAkLTeEEA~kL-----------s~lPGVVSVfPDs~l~L~  188 (391)
                      .+|+|.|+ .|+||+++|+++++++|           +++|+|.+|.+|..+++.
T Consensus        60 ~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~  113 (539)
T 3afg_A           60 AKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVA  113 (539)
T ss_dssp             CEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC
T ss_pred             CeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEeccccccc
Confidence            35789996 69999999999999999           899999999999887664


No 9  
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=94.45  E-value=0.025  Score=42.65  Aligned_cols=45  Identities=24%  Similarity=0.005  Sum_probs=38.5

Q ss_pred             hhhhhhheeeecCcceeeeeecCHHHHHHhcCCCCeEEEcCCCccc
Q 016357          141 DEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDSYLD  186 (391)
Q Consensus       141 EeAk~sIyYSYthsfnGFAAkLTeEEA~kLs~lPGVVSVfPDs~l~  186 (391)
                      +...-+|+|.|.. +++++|.|+++.+++|+++|||..|-+|...+
T Consensus        19 ~~~gG~i~~~~~~-I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~   63 (65)
T 2z30_B           19 LGIGGHIVYQFKL-IPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV   63 (65)
T ss_dssp             GGGTCEEEEECSS-SSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred             HHCCCEEEEEecC-CcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence            3345568888855 99999999999999999999999999997654


No 10 
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=94.44  E-value=0.0069  Score=56.90  Aligned_cols=8  Identities=38%  Similarity=0.779  Sum_probs=3.8

Q ss_pred             CchhhHHH
Q 016357          206 DPKYHEEW  213 (391)
Q Consensus       206 ~p~~~~~~  213 (391)
                      ..+|+++.
T Consensus       319 ~~~fR~~~  326 (448)
T 2z73_A          319 HPKFREAI  326 (448)
T ss_dssp             CHHHHHHH
T ss_pred             hHHHHHHH
Confidence            44555443


No 11 
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=21.65  E-value=1.1e+02  Score=22.14  Aligned_cols=18  Identities=28%  Similarity=0.115  Sum_probs=13.5

Q ss_pred             HHHHHhcCCCCeEEEcCC
Q 016357          165 ETSYKLKELPGVRWVLPD  182 (391)
Q Consensus       165 EEA~kLs~lPGVVSVfPD  182 (391)
                      +-.++|++++||..|.--
T Consensus        61 ~l~~~L~~~~~V~~v~~~   78 (88)
T 2ko1_A           61 TLMDKLRKVQGVFTVERL   78 (88)
T ss_dssp             HHHHHHTTCTTEEEEEEE
T ss_pred             HHHHHHhcCCCceEEEEe
Confidence            334679999999998543


No 12 
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.83  E-value=1.2e+02  Score=28.72  Aligned_cols=51  Identities=8%  Similarity=-0.009  Sum_probs=35.0

Q ss_pred             CChHHHHHHHHHHHHHHcCCCchhhhhhheeeecCcceeeeeecCHHHHHHhcCCCCeEEEcCCC
Q 016357          119 PTRDEIIDRYIKTLATVFDGREDEARMKIYSVSTKHYYAFGALVDEETSYKLKELPGVRWVLPDS  183 (391)
Q Consensus       119 ~t~~~~idsH~q~LASVL~GSeEeAk~sIyYSYthsfnGFAAkLTeEEA~kLs~lPGVVSVfPDs  183 (391)
                      .+.+++.+++..+...+=       ..-|+|.+       ...|+.+...+|+++|.|+-|.-.+
T Consensus       120 ~s~~~l~~~f~~va~a~~-------lPiilYn~-------g~~l~~~~~~~La~~pnIvgiKdss  170 (316)
T 3e96_A          120 VTAGGVYAYFRDIIEALD-------FPSLVYFK-------DPEISDRVLVDLAPLQNLVGVKYAI  170 (316)
T ss_dssp             CCHHHHHHHHHHHHHHHT-------SCEEEEEC-------CTTSCTHHHHHHTTCTTEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhCC-------CCEEEEeC-------CCCCCHHHHHHHHcCCCEEEEEeCC
Confidence            566667777666555431       12245542       4579999999999999999987554


Done!