BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016361
(390 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
pdb|2P0U|B Chain B, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
Length = 413
Score = 284 bits (727), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/374 (40%), Positives = 219/374 (58%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDE-SIKEKLERLCKTTTVKTRYTVMSK 82
G ATVLA+GKA P+ + Q + + T D+ ++K K +R+C + +K R+ + +
Sbjct: 33 GPATVLAMGKAVPANVFEQATYPDFFFNITNSNDKPALKAKFQRICDKSGIKKRHFYLDQ 92
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL+ P + T ++ R EIA V ++A EAS+ IKEWGRP +ITHIV ++S
Sbjct: 93 KILESNPAMCTYMETSLNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEITHIVMATTSG 152
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG +L + LGLR +V RVM+Y G + G T LRVAKD+AENN G+RVL SE T
Sbjct: 153 VNMPGAELATAKLLGLRPNVRRVMMYQQGXFAGATVLRVAKDLAENNAGARVLAICSEVT 212
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+++ LVG+ALF P E P E+++A + LP +
Sbjct: 213 AVTFRAPSETHIDGLVGSALFGDGAAAVIVGSDPRPGIE-RPIYEMHWAGEMVLPESDGA 271
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L+E G+ F L +D+P I +NI F K G +N+LFWAVHPGGPAIL+++
Sbjct: 272 IDGHLTEAGLVFHLLKDVPGLITKNIGGFLKDTKNLVGASSWNELFWAVHPGGPAILDQV 331
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGD------EEWGLALAF 376
E+ L+L K + SR L DYGN+SS ++ +V+D +RE EWG + F
Sbjct: 332 EAKLELEKGKFQASRDILSDYGNMSSASVLFVLDRVRERSLESNKSTFGEGSEWGFLIGF 391
Query: 377 GPGITFEGILLRGL 390
GPG+T E +LLR L
Sbjct: 392 GPGLTVETLLLRAL 405
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWJ|B Chain B, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWK|A Chain A, Crystal Structure Of The Polyketide Synthase 1 From
Huperzia Serrata
Length = 402
Score = 284 bits (726), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/374 (39%), Positives = 226/374 (60%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG + P+ + Q + + T C D++ +K+K +R+C + +K R+ ++
Sbjct: 28 GPATILAIGTSNPTNIFEQSTYPDFFFDVTNCNDKTELKKKFQRICDKSGIKKRHFHLTD 87
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL K P + A++ R +IA V ++A EA+++ IK+WG+P ITH+V+ ++S
Sbjct: 88 EILRKNPSICKFKEASLDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSG 147
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V RVMLY G Y G T LRVAKD+AENN G+RVL+ SE T
Sbjct: 148 VDMPGADFQLAKLLGLRPTVKRVMLYQQGXYAGATVLRVAKDLAENNKGARVLVACSEVT 207
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+++ LVG+ALF P + +E P E+++A + LP +
Sbjct: 208 AVTFRAPSETHLDGLVGSALFGDGAAALIVGSDP-VPQEEKPLFEIHWAGEAVLPDSDGA 266
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
I+G L E G+ F L +D+P I +NI++ + + +ND+FWAVHPGGPAIL+++
Sbjct: 267 INGHLREAGLIFHLLKDVPGLISKNIDKVLAEPLEYVHFPSYNDMFWAVHPGGPAILDQI 326
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMRE-----ELKRKGDE-EWGLALAF 376
E+ L L+ K++ SR L YGN+SS ++ +V+D +R+ L G+ EWG + F
Sbjct: 327 EAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIRKNSEELHLPTTGEGFEWGFVIGF 386
Query: 377 GPGITFEGILLRGL 390
GPG+T E +LLR +
Sbjct: 387 GPGLTVETLLLRSI 400
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein
Length = 979
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/375 (38%), Positives = 218/375 (58%), Gaps = 10/375 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCED-ESIKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P + Q + Y + TK E ++K+K R+C + +K RY +++
Sbjct: 602 GPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTALKKKFNRICDKSMIKKRYIHLTE 661
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
+L+++P + + ++ R EI V ++ EA+L +KEWG+P ITH+V+ ++S
Sbjct: 662 EMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSG 721
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L++ LGL V RVMLY GCY G T LR AKD+AENN G+RVL+ SE T
Sbjct: 722 VEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEIT 781
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
++ FR P++ LVG ALF P + E P +L A Q F+P +
Sbjct: 782 VVTFRGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIE-RPLFQLVSAAQTFIPNSAGA 840
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
I G L E G+ F L ++P I EN+E+ + G+ D+N LFW HPGGPAIL+ +
Sbjct: 841 IAGNLREVGLTFHLWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPAILDAV 900
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE-------EWGLALA 375
E+ L L+ +KLE +R L +YGN+SS + +++D MR++ KG+ +WG+
Sbjct: 901 EAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKK-SLKGERATTGEGLDWGVLFG 959
Query: 376 FGPGITFEGILLRGL 390
FGPG+T E ++L +
Sbjct: 960 FGPGLTIETVVLHSI 974
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D51|B Chain B, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D52|A Chain A, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
pdb|2D52|B Chain B, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
Length = 406
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 209/377 (55%), Gaps = 11/377 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDE-SIKEKLERLCKTTTVKTRYTVMSK 82
G ATV+AIG A P + PQ+ + Y R T E + +K+K + +CK T + RY +
Sbjct: 28 GTATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDE 87
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
L KYP +T+ ++ R +I P V + EA++ I+EWGRP +ITH+V+ +S
Sbjct: 88 EFLKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCG 147
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +P D + LGL ++V + +Y G Y G T +R AKD+AENN G+RVL+ +E T
Sbjct: 148 VDMPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELT 207
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
I+G R PN++ + +G +LF P + E P E+ Q +P T++V
Sbjct: 208 IMGLRAPNETHLDNAIGISLFGDGAAALIIGSDPIIGVE-KPMFEIVCTKQTVIPNTEDV 266
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGL---QDFNDLFWAVHPGGPAIL 319
I L E G+ F L + P I N+E + G+ +D+N LFW HPGG AIL
Sbjct: 267 IHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAIL 326
Query: 320 NRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EWGLA 373
+++E+ LKL +K +R L DYGN+ S ++ Y++D MR + KG E EWG+
Sbjct: 327 DQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVL 386
Query: 374 LAFGPGITFEGILLRGL 390
L FGPGIT E ILL L
Sbjct: 387 LGFGPGITVETILLHSL 403
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol
pdb|1CGK|A Chain A, Chalcone Synthase From Alfalfa Complexed With Naringenin
Length = 389
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 215/374 (57%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y GC+ G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A
pdb|2D3M|B Chain B, Pentaketide Chromone Synthase Complexed With Coenzyme A
Length = 406
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 208/377 (55%), Gaps = 11/377 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDE-SIKEKLERLCKTTTVKTRYTVMSK 82
G ATV+AIG A P + PQ+ + Y R T E + +K+K + +CK T + RY +
Sbjct: 28 GTATVMAIGTAHPPHIFPQDTYADVYFRATNSEHKVELKKKFDHICKKTMIGKRYFNYDE 87
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
L KYP +T+ ++ R +I P V + EA++ I+EWGRP +ITH+V+ +S
Sbjct: 88 EFLKKYPNITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEITHLVFCTSCG 147
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +P D + LGL ++V + +Y G Y G T +R AKD+AENN G+RVL+ +E T
Sbjct: 148 VDMPSADFQCAKLLGLHANVNKYCIYMQGXYAGGTVMRYAKDLAENNRGARVLVVCAELT 207
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
I+ R PN++ + +G +LF P + E P E+ Q +P T++V
Sbjct: 208 IMMLRAPNETHLDNAIGISLFGDGAAALIIGSDPIIGVE-KPMFEIVCTKQTVIPNTEDV 266
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGL---QDFNDLFWAVHPGGPAIL 319
I L E G+ F L + P I N+E + G+ +D+N LFW HPGG AIL
Sbjct: 267 IHLHLRETGMMFYLSKGSPMTISNNVEACLIDVFKSVGITPPEDWNSLFWIPHPGGRAIL 326
Query: 320 NRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EWGLA 373
+++E+ LKL +K +R L DYGN+ S ++ Y++D MR + KG E EWG+
Sbjct: 327 DQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAKGLETYGEGLEWGVL 386
Query: 374 LAFGPGITFEGILLRGL 390
L FGPGIT E ILL L
Sbjct: 387 LGFGPGITVETILLHSL 403
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa
pdb|1D6F|A Chain A, Chalcone Synthase C164a Mutant
Length = 389
Score = 265 bits (676), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 214/374 (57%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
pdb|1CHW|B Chain B, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
Length = 389
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 214/374 (57%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGSFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa
Length = 389
Score = 264 bits (674), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 214/374 (57%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A
Length = 388
Score = 264 bits (674), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 214/374 (57%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 14 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 73
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 74 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 133
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 134 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 193
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 194 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 252
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 253 IDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 312
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 313 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 372
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 373 GPGLTIETVVLRSV 386
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant
Length = 389
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 213/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
ID L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDAHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F)
pdb|3A5S|B Chain B, Benzalacetone Synthase (I207lL208F)
Length = 387
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/372 (37%), Positives = 206/372 (55%), Gaps = 8/372 (2%)
Query: 26 ATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDE-SIKEKLERLCKTTTVKTRYTVMSKAI 84
ATV+AIG A P Q + Y R T + ++K+K +RLC+ + ++ RY +++ I
Sbjct: 13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 85 LDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIR 144
L + P + + ++ R ++ V E+ EA+L IKEWG+P ITH++ + +
Sbjct: 73 LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 145 LPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTIL 204
+PG D L+ L L V R M Y LGCY G T LR+AKDIAENN G+RVL+ SE T
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 205 GFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNVID 264
FR P+++ ++G ALF P L E P EL Q +P + I+
Sbjct: 193 CFRGPSETHLDSMIGQALFGDGAAAVIVGADPDLTVE-RPIFELVSTAQTIVPESHGAIE 251
Query: 265 GRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRLES 324
G L E G++F L + +P I NI+ + D+N LFW HPGGPAIL+++ +
Sbjct: 252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTA 311
Query: 325 NLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EWGLALAFGP 378
+ L +KL+ +R+ L DYGN+SS T+F++MD MR++ G EWG+ FGP
Sbjct: 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGP 371
Query: 379 GITFEGILLRGL 390
GIT E ++LR +
Sbjct: 372 GITVETVVLRSV 383
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant)
pdb|1D6I|B Chain B, Chalcone Synthase (H303q Mutant)
Length = 388
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 213/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 14 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 73
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 74 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 133
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 134 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 193
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 194 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 252
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +D+P + +NI + + G+ D+N +FW PGGPAIL+++
Sbjct: 253 IDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAQPGGPAILDQV 312
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 313 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 372
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 373 GPGLTIETVVLRSV 386
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa)
Length = 387
Score = 261 bits (666), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 213/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 13 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 72
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 73 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 132
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 133 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 192
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 193 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 251
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 252 IDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 311
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YG +SS + +++D MR++ LK G+ EWG+ F
Sbjct: 312 EQKLALKPEKMNATREVLSEYGAMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 371
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 372 GPGLTIETVVLRSV 385
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant
Length = 389
Score = 261 bits (666), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 213/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG AL P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALSGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDGHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f)
pdb|1I8B|B Chain B, Chalcone Synthase (g256f)
Length = 389
Score = 261 bits (666), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 213/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
ID L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDFHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|1I88|A Chain A, Chalcone Synthase (G256v)
pdb|1I88|B Chain B, Chalcone Synthase (G256v)
Length = 389
Score = 260 bits (665), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 213/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
ID L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDVHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|1I89|A Chain A, Chalcone Synthase (G256l)
pdb|1I89|B Chain B, Chalcone Synthase (G256l)
Length = 389
Score = 260 bits (665), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 213/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA++ IKEWG+P ITH++ ++S
Sbjct: 75 EILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSG 134
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L+ LGLR V R M+Y G + G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 135 VDMPGADYQLTKLLGLRPYVKRYMMYQQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVT 194
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 195 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 253
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
ID L E G+ F L +D+P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 254 IDLHLREAGLTFHLLKDVPGIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 313
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 314 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 373
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 374 GPGLTIETVVLRSV 387
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea
pdb|1Z1F|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea (Resveratrol-Bound Form)
Length = 390
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 212/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G ATVLAIG A P + Q + Y R T E + +K+K +R+C+ T +K R+ +++
Sbjct: 16 GPATVLAIGTANPPNCVDQSTYADYYFRVTNSEHMTDLKKKFQRICERTQIKNRHMYLTE 75
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R ++ V + EA+ IKEWG+P ITH+++ ++S
Sbjct: 76 EILKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSG 135
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ LPG D L LGL V R M+Y GC+ G T LR+AKD+AENN +RVL+ SE T
Sbjct: 136 VALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENT 195
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+++ LVG ALF P + E +P E+ QQ +P +
Sbjct: 196 SVTFRGPSETDMDSLVGQALFADGAAAIIIGSDPVPEVE-NPLFEIVSTDQQLVPNSHGA 254
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
I G L E G+ F L + +P I +NI + K G+ D+N +FW HPGG AIL+++
Sbjct: 255 IGGLLREVGLTFYLNKSVPDIISQNINDALSKAFDPLGISDYNSIFWIAHPGGRAILDQV 314
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E + L +K++ +R L +YGN+SS +F++MD MR++ LK G+ +WG+ F
Sbjct: 315 EEKVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMRKKSLEAGLKTTGEGLDWGVLFGF 374
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 375 GPGLTIETVVLRSM 388
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0V|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0W|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
Length = 393
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 211/374 (56%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P+ + Q + Y + T E ++ +KEK +R+C + +K RY +++
Sbjct: 19 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTE 78
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
IL + P + + ++ R + V + EA++ IKEWG+P ITH++ S++
Sbjct: 79 EILKENPNVCEYMAPSLDARQAMLAMEVPRLGKEAAVKAIKEWGQPKSKITHLIVCSTTT 138
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
LPG D L+ LGLR V RV ++ GC+ G T LR+AKD+AENN G+RVL+ SE T
Sbjct: 139 PDLPGADYQLTKLLGLRPYVKRVGVFQHGCFAGGTVLRLAKDLAENNKGARVLVVCSEVT 198
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ FR P+ + LVG ALF P + E P E+ + Q P ++
Sbjct: 199 AVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIE-KPIFEMVWTAQTIAPDSEGA 257
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
IDG L E G+ F L +P + +NI + + G+ D+N +FW HPGGPAIL+++
Sbjct: 258 IDGHLREAGLTFHLKGAVPDIVSKNITKALVEAFEPLGISDYNSIFWIAHPGGPAILDQV 317
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE-----LKRKGDE-EWGLALAF 376
E L L +K+ +R L +YGN+SS + +++D MR++ LK G+ EWG+ F
Sbjct: 318 EQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRKKSTQNGLKTTGEGLEWGVLFGF 377
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 378 GPGLTIETVVLRSV 391
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5Q|B Chain B, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5R|A Chain A, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
pdb|3A5R|B Chain B, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
Length = 387
Score = 258 bits (659), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 205/372 (55%), Gaps = 8/372 (2%)
Query: 26 ATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDE-SIKEKLERLCKTTTVKTRYTVMSKAI 84
ATV+AIG A P Q + Y R T + ++K+K +RLC+ + ++ RY +++ I
Sbjct: 13 ATVMAIGTANPPNCYYQADFPDFYFRVTNSDHLINLKQKFKRLCENSRIEKRYLHVTEEI 72
Query: 85 LDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIR 144
L + P + + ++ R ++ V E+ EA+L IKEWG+P ITH++ + +
Sbjct: 73 LKENPNIAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVD 132
Query: 145 LPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTIL 204
+PG D L+ L L V R M Y LGCY G T LR+AKDIAENN G+RVL+ SE T
Sbjct: 133 MPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTT 192
Query: 205 GFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNVID 264
FR P+++ ++G A+ P L E P EL Q +P + I+
Sbjct: 193 CFRGPSETHLDSMIGQAILGDGAAAVIVGADPDLTVE-RPIFELVSTAQTIVPESHGAIE 251
Query: 265 GRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRLES 324
G L E G++F L + +P I NI+ + D+N LFW HPGGPAIL+++ +
Sbjct: 252 GHLLESGLSFHLYKTVPTLISNNIKTCLSDAFTPLNISDWNSLFWIAHPGGPAILDQVTA 311
Query: 325 NLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EWGLALAFGP 378
+ L +KL+ +R+ L DYGN+SS T+F++MD MR++ G EWG+ FGP
Sbjct: 312 KVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQATTGEGLEWGVLFGFGP 371
Query: 379 GITFEGILLRGL 390
GIT E ++LR +
Sbjct: 372 GITVETVVLRSV 383
>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|B Chain B, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|C Chain C, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|D Chain D, Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 211/380 (55%), Gaps = 8/380 (2%)
Query: 18 RRTPTPGKATVLAIGKAFPSQLIPQECLVEGYLRDTKCED-ESIKEKLERLCKTTTVKTR 76
R G AT++AIG A P L Q + Y R T +D + +K+K R+C+ T VK R
Sbjct: 9 REQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKR 68
Query: 77 YTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIV 136
Y +++ IL + P+L + A+ R +I + +A EA+ IKEWGRP +ITH+V
Sbjct: 69 YLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLV 128
Query: 137 YVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLL 196
+ S S I +PG D L++ LGL V R+M+Y C+ G LR+AKD+AENN G+RVL+
Sbjct: 129 FCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLV 188
Query: 197 TTSETTILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFL 256
E T+L FR PN+ L G A F P L+ P E+ A+Q+ +
Sbjct: 189 VACEITVLSFRGPNEGDFEALAGQAGFGDGAGAVVVGADP-LEGIEKPIYEIAAAMQETV 247
Query: 257 PGTQNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGP 316
+Q + G L G F LP I +N+ ++ +A G++++ND+FW HPG
Sbjct: 248 AESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFWVAHPGNW 307
Query: 317 AILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EW 370
AI++ +E+ L+L+ KL +R +YGN+ S T+++VMD +R+ +G +W
Sbjct: 308 AIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQW 367
Query: 371 GLALAFGPGITFEGILLRGL 390
G+ L FGPG++ E ++LR +
Sbjct: 368 GVLLGFGPGLSIETVVLRSM 387
>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|B Chain B, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|C Chain C, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|D Chain D, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 252 bits (643), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 210/380 (55%), Gaps = 8/380 (2%)
Query: 18 RRTPTPGKATVLAIGKAFPSQLIPQECLVEGYLRDTKCED-ESIKEKLERLCKTTTVKTR 76
R G AT++AIG A P L Q + Y R T +D + +K+K R+C+ T VK R
Sbjct: 9 REQRAQGPATIMAIGTATPPNLYEQSTFPDFYFRVTNSDDKQELKKKFRRMCEKTMVKKR 68
Query: 77 YTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIV 136
Y +++ IL + P+L + A+ R +I + +A EA+ IKEWGRP +ITH+V
Sbjct: 69 YLHLTEEILKERPKLCSYKEASFDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLV 128
Query: 137 YVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLL 196
+ S S I +PG D L++ LGL V R+M+Y C+ G LR+AKD+AENN G+RVL+
Sbjct: 129 FCSISGIDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLV 188
Query: 197 TTSETTILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFL 256
E T+L FR PN+ L A F P L+ P E+ A+Q+ +
Sbjct: 189 VACEITVLSFRGPNEGDFEALAFQAGFGDGAGAVVVGADP-LEGIEKPIYEIAAAMQETV 247
Query: 257 PGTQNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGP 316
+Q + G L G F LP I +N+ ++ +A G++++ND+FW HPG
Sbjct: 248 AESQGAVGGHLRAFGWTFYFLNQLPAIIADNLGRSLERALAPLGVREWNDVFWVAHPGNW 307
Query: 317 AILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EW 370
AI++ +E+ L+L+ KL +R +YGN+ S T+++VMD +R+ +G +W
Sbjct: 308 AIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRSTTGDGLQW 367
Query: 371 GLALAFGPGITFEGILLRGL 390
G+ L FGPG++ E ++LR +
Sbjct: 368 GVLLGFGPGLSIETVVLRSM 387
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1QLV|B Chain B, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1EE0|A Chain A, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
pdb|1EE0|B Chain B, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
Length = 402
Score = 246 bits (628), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 203/374 (54%), Gaps = 8/374 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDE-SIKEKLERLCKTTTVKTRYTVMSK 82
G AT+LAIG A P + Q + Y R TK E +KEK +R+C+ T +K RY +++
Sbjct: 20 GLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTAIKKRYLALTE 79
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
L + P + + ++ R ++ V + EA++ I EWG P ITH+++ +++
Sbjct: 80 DYLQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAG 139
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+ +PG D L LGL V R MLY G G T LR+AKD+AENN GSRVL+ SE T
Sbjct: 140 VDMPGADYQLVKLLGLSPSVKRYMLYQQGXAAGGTVLRLAKDLAENNKGSRVLIVCSEIT 199
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
+ F PN++ LV ALF P L E P E+ Q LP T+
Sbjct: 200 AILFHGPNENHLDSLVAQALFGDGAAALIVGSGPHLAVE-RPIFEIVSTDQTILPDTEKA 258
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRL 322
+ L E G+ F+L RD+P + +NIE +K ++ G+ D+N +FW VHPGG AIL+++
Sbjct: 259 MKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQV 318
Query: 323 ESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EWGLALAF 376
E L L KL SR L +YGN+ S + +++D +R+ +G + G+ F
Sbjct: 319 ERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGF 378
Query: 377 GPGITFEGILLRGL 390
GPG+T E ++LR +
Sbjct: 379 GPGMTVETVVLRSV 392
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|E Chain E, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|F Chain F, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
Length = 397
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 209/375 (55%), Gaps = 9/375 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G A++LAIG A P + Q + Y R T E + +K+K +R+C+ + +K RY +++
Sbjct: 21 GFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTE 80
Query: 83 AILDKYPELTTEGSA-TIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSS 141
IL K P++ ++ R + V +A EA+ I+EWG+ ITH+++ S++
Sbjct: 81 EILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTT 140
Query: 142 EIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSET 201
LPG D ++ LGL V RV ++ GC+ G T LR+AKD+AENN G+RVL+ SET
Sbjct: 141 TPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSET 200
Query: 202 TILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQN 261
T + FR P+++ LVG ALF P E + F E+ + Q +P ++
Sbjct: 201 TAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACF-EIVWTAQTVVPNSEG 259
Query: 262 VIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNR 321
I G++ E G+ F+L +P I NIE + ++ + D+N LFW VHPGG AIL+R
Sbjct: 260 AIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDR 319
Query: 322 LESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EWGLALA 375
+E+ L L+ KL +R + +YGN+SS + +++D R+ + G E G+
Sbjct: 320 VEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFG 379
Query: 376 FGPGITFEGILLRGL 390
FGPG+T E ++L+ +
Sbjct: 380 FGPGLTIETVVLKSV 394
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XET|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
Length = 413
Score = 234 bits (597), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/375 (34%), Positives = 209/375 (55%), Gaps = 9/375 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCEDES-IKEKLERLCKTTTVKTRYTVMSK 82
G A++LAIG A P + Q + Y R T E + +K+K +R+C+ + +K RY +++
Sbjct: 37 GFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTE 96
Query: 83 AILDKYPELTTEGSA-TIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSS 141
IL K P++ ++ R + V +A EA+ I+EWG+ ITH+++ S++
Sbjct: 97 EILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTT 156
Query: 142 EIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSET 201
LPG D ++ LGL V RV ++ GC+ G T LR+AKD+AENN G+RVL+ SET
Sbjct: 157 TPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSET 216
Query: 202 TILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQN 261
T + FR P+++ LVG ALF P E + F E+ + Q +P ++
Sbjct: 217 TAVTFRGPSETHLDSLVGQALFGDGASALIVGADPIPQVEKACF-EIVWTAQTVVPNSEG 275
Query: 262 VIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNR 321
I G++ E G+ F+L +P I NIE + ++ + D+N LFW VHPGG AIL+R
Sbjct: 276 AIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDR 335
Query: 322 LESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE------EWGLALA 375
+E+ L L+ KL +R + +YGN+SS + +++D R+ + G E G+
Sbjct: 336 VEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFG 395
Query: 376 FGPGITFEGILLRGL 390
FGPG+T E ++L+ +
Sbjct: 396 FGPGLTIETVVLKSV 410
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
pdb|3OIT|B Chain B, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
Length = 387
Score = 231 bits (589), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 207/375 (55%), Gaps = 11/375 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCED-ESIKEKLERLCKTTTVKTRYTVMSK 82
G A VLAIG A P + QE + + Y R T + ++K+K +R+C+ V+ RY ++
Sbjct: 9 GLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTE 68
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
+L +PE + ++ RL+IA AV E+A EA+ I EWGRPA DITH+V ++S
Sbjct: 69 EMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG 128
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+PG D L LGLR V R ML+ GC+ G LR+AKD+AEN+ G+RVL+ +E T
Sbjct: 129 AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELT 188
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
++ F P++ L+ LF D P E+ A Q +P + +
Sbjct: 189 LMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADA--DDVERPLFEIVSAAQTIIPESDHA 246
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIE----EFCKKLMAKAGLQDFNDLFWAVHPGGPAI 318
++ R +E ++ LGR +P I +N+E + L+ G +NDLFWAVHPG I
Sbjct: 247 LNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTI 306
Query: 319 LNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE-EW---GLAL 374
++++++ L L KL SRR L DYGN+S T+ + +D +R + K EW G+ +
Sbjct: 307 MDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAAAAGEWPELGVMM 366
Query: 375 AFGPGITFEGILLRG 389
AFGPG+T + +LL
Sbjct: 367 AFGPGMTVDAMLLHA 381
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|B Chain B, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|C Chain C, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|D Chain D, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
Length = 416
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 207/375 (55%), Gaps = 11/375 (2%)
Query: 24 GKATVLAIGKAFPSQLIPQECLVEGYLRDTKCED-ESIKEKLERLCKTTTVKTRYTVMSK 82
G A VLAIG A P + QE + + Y R T + ++K+K +R+C+ V+ RY ++
Sbjct: 39 GLAAVLAIGTANPPNCVTQEEIPDFYFRVTNSDHLTALKDKFKRICQEMGVQRRYLHHTE 98
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
+L +PE + ++ RL+IA AV E+A EA+ I EWGRPA DITH+V ++S
Sbjct: 99 EMLSAHPEFVDRDAPSLDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG 158
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
+PG D L LGLR V R ML+ GC+ G LR+AKD+AEN+ G+RVL+ +E T
Sbjct: 159 AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELT 218
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
++ F P++ L+ LF D P E+ A Q +P + +
Sbjct: 219 LMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADA--DDVERPLFEIVSAAQTIIPESDHA 276
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIE----EFCKKLMAKAGLQDFNDLFWAVHPGGPAI 318
++ R +E ++ LGR +P I +N+E + L+ G +NDLFWAVHPG I
Sbjct: 277 LNMRFTERRLDGVLGRQVPGLIGDNVERCLLDMFGPLLGGDGGGGWNDLFWAVHPGSSTI 336
Query: 319 LNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDE-EW---GLAL 374
++++++ L L KL SRR L DYGN+S T+ + +D +R + K EW G+ +
Sbjct: 337 MDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAAAAGEWPELGVMM 396
Query: 375 AFGPGITFEGILLRG 389
AFGPG+T + +LL
Sbjct: 397 AFGPGMTVDAMLLHA 411
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
pdb|2H84|B Chain B, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
Length = 374
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 190/373 (50%), Gaps = 25/373 (6%)
Query: 28 VLAIGKAFPSQLIPQECLVEGYLRDTKCEDESIKEKLERLCKTTTVKTR-----YTVMSK 82
VL IG + P + I Q+ L + D + E+ EK++R+ + + +KTR YT
Sbjct: 16 VLGIGISVPGEPISQQSLKDSISNDFSDKAET-NEKVKRIFEQSQIKTRHLVRDYTKPEN 74
Query: 83 AILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSE 142
+I ++ E T+ + K+ V ++A +A L +K+WG DITHIV V+S+
Sbjct: 75 SIKFRHLETITDVNNQFKK-------VVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG 127
Query: 143 IRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETT 202
I +P + L LGL DV RV L +GC G++ LR A +A+ +P +R+L+ +E
Sbjct: 128 IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVC 187
Query: 203 ILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNV 262
L F N +V +++F P + E +P E+ ++ + P T+N
Sbjct: 188 SLHF--SNTDGGDQMVASSIFADGSAAYIIGCNPRI--EETPLYEVMCSINRSFPNTENA 243
Query: 263 IDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQ-----DFNDLFWAVHPGGPA 317
+ L +EG N L +P I IE F L+ KA LQ D + +H GG +
Sbjct: 244 MVWDLEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFLIHTGGKS 303
Query: 318 ILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDEEWGLALAFG 377
IL +E++L ++ ++ + + YGN+SS ++ +VMD+ R K K + ++LAFG
Sbjct: 304 ILMNIENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHAR---KSKSLPTYSISLAFG 360
Query: 378 PGITFEGILLRGL 390
PG+ FEG L+ +
Sbjct: 361 PGLAFEGCFLKNV 373
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|B Chain B, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|C Chain C, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|D Chain D, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
Length = 393
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 151/331 (45%), Gaps = 4/331 (1%)
Query: 57 DESIKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALE 116
D +E++ R+ + + + TR M+ LD ++ ATI+ R+ + V +A++
Sbjct: 62 DPGQRERIPRVYQKSRITTRR--MAVDPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVD 119
Query: 117 ASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGV 176
S + A +I +V +S+ PG D+ + +LGL + RV++ F+GC +
Sbjct: 120 VSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAM 179
Query: 177 TGLRVAKDIAENNPGSRVLLTTSETTILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXP 236
L A + +P + L+ E + D+V +LF
Sbjct: 180 NALGTATNYVRAHPAMKALVVCIE--LFSVNAVFADDINDVVIHSLFGDGCAALVIGASQ 237
Query: 237 FLDKESSPFMELNYAVQQFLPGTQNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLM 296
+K + + + Q L T++ I ++ GI +L +LP I + +++
Sbjct: 238 VQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEML 297
Query: 297 AKAGLQDFNDLFWAVHPGGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMD 356
GLQ + WA+HPGGP I+ + +L ++ + S L +GN+ S ++ +V++
Sbjct: 298 WDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLE 357
Query: 357 YMREELKRKGDEEWGLALAFGPGITFEGILL 387
M ++ + G+A AFGPG+T EG+L
Sbjct: 358 TMVQQAESAKAISTGVAFAFGPGVTVEGMLF 388
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|C Chain C, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|D Chain D, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
Length = 393
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 151/331 (45%), Gaps = 4/331 (1%)
Query: 57 DESIKEKLERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALE 116
D +E++ R+ + + + TR M+ LD ++ ATI+ R+ + V +A++
Sbjct: 62 DPGQRERIPRVYQKSRITTRR--MAVDPLDAKFDVFRREPATIRDRMHLFYEHAVPLAVD 119
Query: 117 ASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGV 176
S + A +I +V +S+ PG D+ + +LGL + RV++ F+GC +
Sbjct: 120 VSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAM 179
Query: 177 TGLRVAKDIAENNPGSRVLLTTSETTILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXP 236
L A + +P + L+ E + D+V +LF
Sbjct: 180 NALGTATNYVRAHPAMKALVVCIE--LCSVNAVFADDINDVVIHSLFGDGCAALVIGASQ 237
Query: 237 FLDKESSPFMELNYAVQQFLPGTQNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLM 296
+K + + + Q L T++ I ++ GI +L +LP I + +++
Sbjct: 238 VQEKLEPGKVVVRSSFSQLLDNTEDGIVLGVNHNGITCELSENLPGYIFSGVAPVVTEML 297
Query: 297 AKAGLQDFNDLFWAVHPGGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMD 356
GLQ + WA+HPGGP I+ + +L ++ + S L +GN+ S ++ +V++
Sbjct: 298 WDNGLQISDIDLWAIHPGGPKIIEQSVRSLGISAELAAQSWDVLARFGNMLSVSLIFVLE 357
Query: 357 YMREELKRKGDEEWGLALAFGPGITFEGILL 387
M ++ + G+A AFGPG+T EG+L
Sbjct: 358 TMVQQAESAKAISTGVAFAFGPGVTVEGMLF 388
>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
pdb|3E1H|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
Length = 465
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 20/320 (6%)
Query: 88 YPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPG 147
+P + T+K+ E+ V +A+EAS + E ITH+V + ++ PG
Sbjct: 88 HPLVNKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPG 147
Query: 148 GDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDI-----AENNPGSRVLLTTSETT 202
D Y++ +LGL + +V+L+ +GC GG+ LR A ++ A P +R+L+ E +
Sbjct: 148 YDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKP-ARILVLALEVS 206
Query: 203 ILGFRPPNKSRPY---DLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGT 259
R +S +G ALF +L + +P +
Sbjct: 207 TTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDS 266
Query: 260 QNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAK------AGLQDFNDLFWAVHP 313
++ + + G L +P + +++ L++ + Q D WA+HP
Sbjct: 267 EHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHP 326
Query: 314 GGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE----LKRKGD-E 368
GG IL+ ES + L + + S +++GN SS TIF V++ +RE+ L G +
Sbjct: 327 GGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVK 386
Query: 369 EWGLALAFGPGITFEGILLR 388
E+ + AFGPGI E +L+
Sbjct: 387 EYVVGCAFGPGINVEMCMLK 406
>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|B Chain B, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|C Chain C, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|D Chain D, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
Length = 379
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 144/320 (45%), Gaps = 20/320 (6%)
Query: 88 YPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPG 147
+P + T+K+ E+ V +A+EAS + E ITH+V + ++ PG
Sbjct: 59 HPLVNKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPG 118
Query: 148 GDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDI-----AENNPGSRVLLTTSETT 202
D Y++ +LGL + +V+L+ +G GG+ LR A ++ A P +R+L+ E +
Sbjct: 119 YDHYVAKELGLSDRLEKVLLHGIGXSGGLAALRTAANLCLGHTARGKP-ARILVLALEVS 177
Query: 203 ILGFRPPNKSRPY---DLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGT 259
R +S +G ALF +L + +P +
Sbjct: 178 TTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDS 237
Query: 260 QNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAK------AGLQDFNDLFWAVHP 313
++ + G + G L +P + +++ L++ + Q D WA+HP
Sbjct: 238 EHDLGGDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHP 297
Query: 314 GGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE----LKRKGD-E 368
GG IL+ ES + L + + S +++GN SS TIF V++ +RE+ L G +
Sbjct: 298 GGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVK 357
Query: 369 EWGLALAFGPGITFEGILLR 388
E+ + AFGPGI E +L+
Sbjct: 358 EYVVGCAFGPGINVEMCMLK 377
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
pdb|1U0M|B Chain B, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
Length = 382
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 140/323 (43%), Gaps = 27/323 (8%)
Query: 66 RLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIAN-PAVVEMALE-ASLACIK 123
RL + T V+TR+ V + I D E + +R + PAV++ AL+ A L
Sbjct: 48 RLIENTGVRTRHIV--QPIEDTLEHPGFEDRNKVYEREAKSRVPAVIQRALDDAELL--- 102
Query: 124 EWGRPAEDITHIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAK 183
A DI I+YVS + +P +L +++G S ++ + LGC G + A
Sbjct: 103 -----ATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAH 157
Query: 184 DIAENNPGSRVLLTTSETTILGFRPPNKSRPYDLVGAALFXXXXXXXXXXXXPFLDKESS 243
D P + L+ E L ++P + +G +
Sbjct: 158 DFCTAYPEANALIVACEFCSLCYQPTD-------LGVGSLLCNGLFGDGIAAAVVRGRGG 210
Query: 244 PFMELNYAVQQFLPGTQNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAKAGLQD 303
+ L +P T++ I + G +F L + +P +E + K+L + G D
Sbjct: 211 TGVRLERNGSYLIPKTEDWIMYDVKATGFHFLLDKRVPATMEP-LAPALKELAGEHGW-D 268
Query: 304 FNDL-FWAVHPGGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREEL 362
+DL F+ VH GGP IL+ L + L+++ SR L +YGN++S V+D +R
Sbjct: 269 ASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAV---VLDALRRLF 325
Query: 363 KRKGDEEW--GLALAFGPGITFE 383
G EE GL FGPGIT E
Sbjct: 326 DEGGVEEGARGLLAGFGPGITAE 348
>pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUO|B Chain B, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUT|A Chain A, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|B Chain B, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|C Chain C, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|D Chain D, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
Length = 379
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 20/320 (6%)
Query: 88 YPELTTEGSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPG 147
+P + T+K+ E+ V +A+EAS + E ITH+V + ++ PG
Sbjct: 59 HPLVNKPNPPTVKELHEVFMSDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPG 118
Query: 148 GDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDI-----AENNPGSRVLLTTSETT 202
D Y++ +LGL + +V+L+ +G GG+ LR A ++ A P +R+L+ E +
Sbjct: 119 YDHYVAKELGLSDRLEKVLLHGIGXSGGLAALRTAANLCLGHTARGKP-ARILVLALEVS 177
Query: 203 ILGFRPPNKSRPY---DLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGT 259
R +S +G ALF +L + +P +
Sbjct: 178 TTMVRSELESIDALQETRIGIALFSDCASAVILSNGIGEAPGKPAIYDLLGWENRVIPDS 237
Query: 260 QNVIDGRLSEEGINFKLGRDLPQKIEENIEEFCKKLMAK------AGLQDFNDLFWAVHP 313
++ + + G L +P + +++ L++ + Q D WA+HP
Sbjct: 238 EHDLGFDVDPMGWKVVLSPRVPVLAKASLQPTYADLLSSLQDQLPSSYQKPADFDWAMHP 297
Query: 314 GGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREE----LKRKGD-E 368
GG IL+ ES + L + + S +++GN SS TIF V++ +RE+ L G +
Sbjct: 298 GGATILSGAESAMGLTPEHMRASYDRYINHGNSSSATIFSVLNRLREKDMDALAPGGKVK 357
Query: 369 EWGLALAFGPGITFEGILLR 388
E+ + AFGPGI E +L+
Sbjct: 358 EYVVGCAFGPGINVEMCMLK 377
>pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A
Type Iii Polyketide Synthase
Length = 413
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 18/294 (6%)
Query: 95 GSATIKQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDLYLSS 154
S T+++R A AV A+ ++ G D+ ++ +S+ LPG D+ L++
Sbjct: 122 ASQTVQERTAPAWEAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALAN 181
Query: 155 KLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGFRPPNKSRP 214
+L LR D + C G L +A D+ +P VL+ SE ++P + +
Sbjct: 182 RLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQPADDTL- 240
Query: 215 YDLVGAALFXXXXXXXXXXXXPFLDKESSPFMELNYAVQQFLPGTQNVIDGRLSEEGINF 274
L+ LF P + + L+ A LPGT+++ +G +F
Sbjct: 241 ESLIVRLLFADTAVAAVVTGRPRPES----VLRLDAAWHHTLPGTRDLHRLETRADGTHF 296
Query: 275 KLGRDLPQKIEENIEEFCKKLMAKAGLQD-----FNDLFWAVHPGGPAILNRLESNL--K 327
+ R P+ ++E + + L + +D D+ A HPGG +L +E + +
Sbjct: 297 VMDRRGPRAVQETVTAMWEWLRVR--YEDDPSSWHPDVLLA-HPGGTRVLEYMEQTMPDE 353
Query: 328 LNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRKGDEEWGLALAFGPGIT 381
+ L SR + GN +F ++ + ++ G + A PG+T
Sbjct: 354 WPSGLLSYSRDSYTS-GNRGGAAVFDILRRAHDAGQKTGSR--AVLYAAAPGLT 404
>pdb|2EBD|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl-carrier-protein]
Synthase Iii From Aquifex Aeolicus Vf5
pdb|2EBD|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl-carrier-protein]
Synthase Iii From Aquifex Aeolicus Vf5
Length = 309
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 277 GRDLPQKIEENIEEFCKKLMAKAGLQDFNDLFWAVHPGGPAILNRLESNLKLNNQKLECS 336
GR+L + ++EE C++++ KAG++ H I+N L L + +K+ +
Sbjct: 201 GRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVN 260
Query: 337 RRALMDYGNVSSNTI-FYVMDYMREELKRKGDEEWGLALAFGPGITFEGILLR 388
+ YGN S+ +I + + ++E ++GD L A G G+T+ +LLR
Sbjct: 261 ---IQKYGNTSAASIPIALHEAIKEGKVKRGD--LILMTAMGGGLTWGAVLLR 308
>pdb|3GWA|A Chain A, 1.6 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWA|B Chain B, 1.6 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWE|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWE|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
Length = 365
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 79 VMSKAILDK-YPELTTE---GSATIKQRLEIANP--AVVEMALEASLACIKEWGRPAEDI 132
V++ +L + YP+ E I++R IA P ++A EA+ + A+ +
Sbjct: 44 VLTNDVLAQLYPDWPAEKILAKTGIRER-RIAAPRETAADLAYEAARKLFAQGAVGADQV 102
Query: 133 THIVYVSSS-EIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPG 191
++ + + + LP L +LG+ + G + + LGC G V GL +AK + E
Sbjct: 103 DFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVN-LGCSGYVYGLSLAKGLVETGAA 161
Query: 192 SRVLLTTSETTILGFRPPNKS 212
VLL T++T P +KS
Sbjct: 162 RCVLLLTADTYSKYLHPLDKS 182
>pdb|3LED|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Iii From Rhodopseudomonas Palustris Cga009
pdb|3LED|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Iii From Rhodopseudomonas Palustris Cga009
Length = 392
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 65 ERLCKTTTVKTRYTVMSKAILDKYPELTTEGSATIKQRLEIANPAVVEMALEASLACIKE 124
E + K + +K+RY V I+D P++ I +R + E A+ A+ I+
Sbjct: 77 EFIEKASGIKSRYVVAKPGIVD--PDVXRP---IIPERSNDELSILAEXAVTAAEQAIER 131
Query: 125 WGRPAEDITHIVYVSSSEIR-LPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAK 183
WG+P E I ++ S+ R P + + + LGL G + C GL+ A
Sbjct: 132 WGKPRERIGAVLCACSNXQRAYPAXAIEVQNALGLG---GFAFDXNVACSSATFGLKTAA 188
Query: 184 DIAENNPGSRVLLTTSE--TTILGFR 207
D VL E + L FR
Sbjct: 189 DFVGGGSVDAVLXVNPEICSGHLNFR 214
>pdb|3SQZ|A Chain A, Crystal Structure Of Hmg_coa Synthase Complexed With Coa
Length = 389
Score = 35.0 bits (79), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 130 EDITHIVYVSSSEI-RLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAEN 188
E I ++ + S + + G +Y+ S LG++ + CY L AK E
Sbjct: 69 EKIDMVILATESSVDQSKAGAVYVHSLLGIQPFARSFEMKEAXCYSATAALNYAKLHVEK 128
Query: 189 NPGSRVLLTTSETTILGFRPPNKS 212
+P +RVL+ S+ G P +S
Sbjct: 129 HPDTRVLVLASDIAKYGIGTPGES 152
>pdb|3LEH|A Chain A, The Crystal Structure Of Smu.943c From Streptococcus
Mutans Ua159
Length = 425
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 130 EDITHIVYVSSSEI-RLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRVAKDIAEN 188
E I ++ + S + + G +Y+ S LG++ R CY L AK E
Sbjct: 103 EKIDMVILATESSVDQSKAGAVYVHSLLGIQP-FARSFEMKEACYSATAALNYAKLHVEK 161
Query: 189 NPGSRVLLTTSETTILGFRPPNKS 212
+P +RVL+ S+ G P +S
Sbjct: 162 HPDTRVLVLASDIAKYGIGTPGES 185
>pdb|1KV9|A Chain A, Structure At 1.9 A Resolution Of A Quinohemoprotein
Alcohol Dehydrogenase From Pseudomonas Putida Hk5
Length = 668
Score = 31.6 bits (70), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 142 EIRLPGG--DLYLSSKLGLRSDVGRVMLYF 169
E+R PGG +LYLSS L +R D G++ ++
Sbjct: 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHY 286
>pdb|2HDB|A Chain A, Hmg-coa Synthase From Enterococcus Faecalis. Mutation
Alanine 110 To Glycine
pdb|2HDB|B Chain B, Hmg-coa Synthase From Enterococcus Faecalis. Mutation
Alanine 110 To Glycine
Length = 383
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 171 GCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGF 206
GCYG GL++AK+ +P +VL+ ++ G
Sbjct: 110 GCYGATAGLQLAKNHVALHPDKKVLVVAADIAKYGL 145
>pdb|4EFI|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein)
Synthase From Burkholderia Xenovorans Lb400
Length = 354
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 100 KQRLEIANPAVVEMALEASLACIKEWGRPAEDITHIVYVSSS-EIRLPGGDLYLSSKLGL 158
++R A + ++ +A + G A+ I +++VS + RLP L ++L L
Sbjct: 56 RRRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDL 115
Query: 159 RSDVGRVMLYFLGCYGGVTGLRVAKDIAENNPGSRVLLTTSETTILGFRPPNKS 212
+ + LGC G L + ++ + RVLL +T P ++S
Sbjct: 116 PASC-LALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMIDPTDRS 168
>pdb|1E3A|A Chain A, A Slow Processing Precursor Penicillin Acylase From
Escherichia Coli
pdb|1GK9|A Chain A, Crystal Structures Of Penicillin Acylase Enzyme-Substrate
Complexes: Structural Insights Into The Catalytic
Mechanism
Length = 260
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 300 GLQDFNDLFWAVHPGGPAILNRLESN--LKLNNQKLECS 336
G+ FN L W V+P P + ESN LK N Q + +
Sbjct: 171 GMAVFNQLKWLVNPSAPTTIAVQESNYPLKFNQQNSQTA 209
>pdb|1GM7|A Chain A, Crystal Structures Of Penicillin Acylase Enzyme-Substrate
Complexes: Structural Insights Into The Catalytic
Mechanism
Length = 209
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 300 GLQDFNDLFWAVHPGGPAILNRLESN--LKLNNQKLECS 336
G+ FN L W V+P P + ESN LK N Q + +
Sbjct: 171 GMAVFNQLKWLVNPSAPTTIAVQESNYPLKFNQQNSQTA 209
>pdb|1PNK|A Chain A, Penicillin Acylase Has A Single-amino-acid Catalytic
Centre
pdb|1PNL|A Chain A, Penicillin Acylase Has A Single-amino-acid Catalytic
Centre
pdb|1PNM|A Chain A, Penicillin Acylase Has A Single-Amino-Acid Catalytic
Centre
pdb|1AI4|A Chain A, Penicillin Acylase Complexed With
3,4-Dihydroxyphenylacetic Acid
pdb|1AI5|A Chain A, Penicillin Acylase Complexed With M-Nitrophenylacetic Acid
pdb|1AI6|A Chain A, Penicillin Acylase With P-Hydroxyphenylacetic Acid
pdb|1AI7|A Chain A, Penicillin Acylase Complexed With Phenol
pdb|1AJN|A Chain A, Penicillin Acylase Complexed With P-Nitrophenylacetic Acid
pdb|1AJP|A Chain A, Penicillin Acylase Complexed With
2,5-Dihydroxyphenylacetic Acid
pdb|1AJQ|A Chain A, Penicillin Acylase Complexed With Thiopheneacetic Acid
pdb|1FXH|A Chain A, Mutant Of Penicillin Acylase Impaired In Catalysis With
Phenylacetic Acid In The Active Site
pdb|1FXV|A Chain A, Penicillin Acylase Mutant Impaired In Catalysis With
Penicillin G In The Active Site
pdb|1GM8|A Chain A, Crystal Structures Of Penicillin Acylase Enzyme-Substrate
Complexes: Structural Insights Into The Catalytic
Mechanism
pdb|1H2G|A Chain A, Altered Substrate Specificity Mutant Of Penicillin Acylase
Length = 209
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 300 GLQDFNDLFWAVHPGGPAILNRLESN--LKLNNQKLECS 336
G+ FN L W V+P P + ESN LK N Q + +
Sbjct: 171 GMAVFNQLKWLVNPSAPTTIAVQESNYPLKFNQQNSQTA 209
>pdb|1GM9|A Chain A, Crystal Structures Of Penicillin Acylase Enzyme-Substrate
Complexes: Structural Insights Into The Catalytic
Mechanism
Length = 209
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 300 GLQDFNDLFWAVHPGGPAILNRLESN--LKLNNQKLECS 336
G+ FN L W V+P P + ESN LK N Q + +
Sbjct: 171 GMAVFNQLKWLVNPSAPTTIAVQESNYPLKFNQQNSQTA 209
>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|B Chain B, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|C Chain C, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6N|A Chain A, Crystal Structure Of Rpff
pdb|3M6N|B Chain B, Crystal Structure Of Rpff
pdb|3M6N|C Chain C, Crystal Structure Of Rpff
Length = 305
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 134 HIVYVSSSEIRLPGGDLYLSSKLGLRSDVGRVMLYFLGCYGGVTGLRV 181
H+V S S++ GGDL L +L D R++ Y C GV V
Sbjct: 88 HVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVRGVHAFHV 135
>pdb|1GKF|A Chain A, Crystal Structures Of Penicillin Acylase Enzyme-Substrate
Complexes: Structural Insights Into The Catalytic
Mechanism
Length = 260
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 300 GLQDFNDLFWAVHPGGPAILNRLESN--LKLNNQKLECS 336
G+ FN L W V+P P + ESN LK N Q + +
Sbjct: 171 GMAVFNQLKWLVNPSAPTTIAVQESNYPLKFNQQNSQTA 209
>pdb|1KEC|A Chain A, Penicillin Acylase Mutant With Phenyl Proprionic Acid
Length = 209
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 300 GLQDFNDLFWAVHPGGPAILNRLESN--LKLNNQKLEC 335
G+ FN L W V+P P + ESN LK N Q +
Sbjct: 172 GMAVFNQLKWLVNPSAPTTIAVQESNYPLKFNQQNSQT 209
>pdb|1JX9|A Chain A, Penicillin Acylase, Mutant
pdb|1K5Q|A Chain A, Penicillin Acylase, Mutant Complexed With Paa
pdb|1K5S|A Chain A, Penicillin Acylase, Mutant Complexed With Ppa
pdb|1K7D|A Chain A, Penicillin Acylase With Phenyl Proprionic Acid
Length = 209
Score = 29.3 bits (64), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 300 GLQDFNDLFWAVHPGGPAILNRLESN--LKLNNQKLEC 335
G+ FN L W V+P P + ESN LK N Q +
Sbjct: 172 GMAVFNQLKWLVNPSAPTTIAVQESNYPLKFNQQNSQT 209
>pdb|2DZK|A Chain A, Structure Of The Ubx Domain In Mouse Ubx Domain-Containing
Protein 2
Length = 109
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 313 PGGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRK 365
P G + N+ S+ L + ++ YGN S T+F ++ RE+ KR+
Sbjct: 21 PDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTREDYKRR 73
>pdb|2KXJ|A Chain A, Solution Structure Of Ubx Domain Of Human Ubxd2 Protein
Length = 90
Score = 28.1 bits (61), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 313 PGGPAILNRLESNLKLNNQKLECSRRALMDYGNVSSNTIFYVMDYMREELKRK 365
P G + N+ S+ L + ++ YGN S T+F ++ +E+ K+K
Sbjct: 20 PDGSSFTNQFPSDAPLEEARQFAAQTVGNTYGNFSLATMFPRREFTKEDYKKK 72
>pdb|1HQK|A Chain A, Crystal Structure Analysis Of Lumazine Synthase From
Aquifex Aeolicus
pdb|1HQK|B Chain B, Crystal Structure Analysis Of Lumazine Synthase From
Aquifex Aeolicus
pdb|1HQK|C Chain C, Crystal Structure Analysis Of Lumazine Synthase From
Aquifex Aeolicus
pdb|1HQK|D Chain D, Crystal Structure Analysis Of Lumazine Synthase From
Aquifex Aeolicus
pdb|1HQK|E Chain E, Crystal Structure Analysis Of Lumazine Synthase From
Aquifex Aeolicus
pdb|1NQU|A Chain A, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
6,7-dioxo-5h-8-ribitylaminolumazine
pdb|1NQU|B Chain B, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
6,7-dioxo-5h-8-ribitylaminolumazine
pdb|1NQU|C Chain C, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
6,7-dioxo-5h-8-ribitylaminolumazine
pdb|1NQU|D Chain D, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
6,7-dioxo-5h-8-ribitylaminolumazine
pdb|1NQU|E Chain E, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
6,7-dioxo-5h-8-ribitylaminolumazine
pdb|1NQV|A Chain A, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-nitroso-6-ribityl-amino-2,4(1h,3h) Pyrimidinedione
pdb|1NQV|B Chain B, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-nitroso-6-ribityl-amino-2,4(1h,3h) Pyrimidinedione
pdb|1NQV|C Chain C, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-nitroso-6-ribityl-amino-2,4(1h,3h) Pyrimidinedione
pdb|1NQV|D Chain D, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-nitroso-6-ribityl-amino-2,4(1h,3h) Pyrimidinedione
pdb|1NQV|E Chain E, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-nitroso-6-ribityl-amino-2,4(1h,3h) Pyrimidinedione
pdb|1NQW|A Chain A, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-(6-d-ribitylamino-2,4(1h,3h)
Pyrimidinedione-5-yl)-1-pentyl-phosphonic Acid
pdb|1NQW|B Chain B, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-(6-d-ribitylamino-2,4(1h,3h)
Pyrimidinedione-5-yl)-1-pentyl-phosphonic Acid
pdb|1NQW|C Chain C, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-(6-d-ribitylamino-2,4(1h,3h)
Pyrimidinedione-5-yl)-1-pentyl-phosphonic Acid
pdb|1NQW|D Chain D, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-(6-d-ribitylamino-2,4(1h,3h)
Pyrimidinedione-5-yl)-1-pentyl-phosphonic Acid
pdb|1NQW|E Chain E, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
5-(6-d-ribitylamino-2,4(1h,3h)
Pyrimidinedione-5-yl)-1-pentyl-phosphonic Acid
pdb|1NQX|A Chain A, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
3-(7-hydroxy-8-ribityllumazine-6-yl)propionic Acid
pdb|1NQX|B Chain B, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
3-(7-hydroxy-8-ribityllumazine-6-yl)propionic Acid
pdb|1NQX|C Chain C, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
3-(7-hydroxy-8-ribityllumazine-6-yl)propionic Acid
pdb|1NQX|D Chain D, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
3-(7-hydroxy-8-ribityllumazine-6-yl)propionic Acid
pdb|1NQX|E Chain E, Crystal Structure Of Lumazine Synthase From Aquifex
Aeolicus In Complex With Inhibitor:
3-(7-hydroxy-8-ribityllumazine-6-yl)propionic Acid
Length = 154
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 107 NPAVVEMALEASLACIKEWGRPAEDITHIVYVSSSEIRLPGGDL 150
N A+V+ +E ++ CI G EDIT + S EI + G+L
Sbjct: 23 NHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGEL 66
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,923,860
Number of Sequences: 62578
Number of extensions: 429524
Number of successful extensions: 1274
Number of sequences better than 100.0: 67
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1119
Number of HSP's gapped (non-prelim): 70
length of query: 390
length of database: 14,973,337
effective HSP length: 101
effective length of query: 289
effective length of database: 8,652,959
effective search space: 2500705151
effective search space used: 2500705151
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)