Your job contains 1 sequence.
>016362
MNDCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVR
YFQAKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVG
KDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQ
LPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGN
SISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYP
NNDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPV
SDPGRGGISRFAIIARLGKIKILNGSEVNS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016362
(390 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2825339 - symbol:PFI "AT1G71440" species:3702 ... 1240 2.9e-126 1
UNIPROTKB|F1NVX8 - symbol:TBCE "Uncharacterized protein" ... 433 9.6e-41 1
UNIPROTKB|Q5RBD9 - symbol:TBCE "Tubulin-specific chaperon... 430 2.0e-40 1
UNIPROTKB|Q32KS0 - symbol:TBCE "Tubulin-specific chaperon... 425 6.8e-40 1
UNIPROTKB|Q15813 - symbol:TBCE "Tubulin-specific chaperon... 418 3.7e-39 1
RGD|1305533 - symbol:Tbce "tubulin folding cofactor E" sp... 410 2.6e-38 1
FB|FBgn0033055 - symbol:tbce "tubulin-specific chaperone ... 400 3.0e-37 1
MGI|MGI:1917680 - symbol:Tbce "tubulin-specific chaperone... 391 2.7e-36 1
ZFIN|ZDB-GENE-051030-120 - symbol:tbce "tubulin folding c... 378 6.5e-35 1
UNIPROTKB|Q5U508 - symbol:tbce "Tubulin-specific chaperon... 371 3.6e-34 1
UNIPROTKB|B7Z3P1 - symbol:TBCE "cDNA FLJ59210, highly sim... 312 3.0e-27 1
DICTYBASE|DDB_G0269990 - symbol:tbcE "tubulin binding cof... 252 5.4e-27 2
UNIPROTKB|G4NCM1 - symbol:MGG_00378 "Tubulin-specific cha... 298 1.2e-25 1
WB|WBGene00019503 - symbol:K07H8.1 species:6239 "Caenorha... 272 8.7e-22 1
SGD|S000000809 - symbol:PAC2 "Microtubule effector requir... 221 1.7e-15 1
MGI|MGI:1925543 - symbol:Tbcel "tubulin folding cofactor ... 215 4.7e-15 1
UNIPROTKB|Q5QJ74 - symbol:TBCEL "Tubulin-specific chapero... 212 1.1e-14 1
RGD|1308880 - symbol:Tbcel "tubulin folding cofactor E-li... 212 1.1e-14 1
ASPGD|ASPL0000026995 - symbol:AN5531 species:162425 "Emer... 215 1.1e-14 1
CGD|CAL0005987 - symbol:orf19.2921 species:5476 "Candida ... 209 3.6e-14 1
ZFIN|ZDB-GENE-040426-1719 - symbol:tbcela "tubulin foldin... 188 6.9e-12 1
UNIPROTKB|F1RGX1 - symbol:TBCE "Uncharacterized protein" ... 158 7.0e-11 1
MGI|MGI:1920564 - symbol:Lrrc69 "leucine rich repeat cont... 170 3.9e-10 1
ZFIN|ZDB-GENE-030131-9296 - symbol:tbcb "tubulin folding ... 150 2.2e-08 1
MGI|MGI:3045299 - symbol:Lrrd1 "leucine rich repeats and ... 155 9.6e-08 1
UNIPROTKB|P25147 - symbol:inlB "Internalin B" species:169... 148 3.7e-07 1
UNIPROTKB|Q99426 - symbol:TBCB "Tubulin-folding cofactor ... 139 4.6e-07 1
DICTYBASE|DDB_G0277983 - symbol:tbcB "tubulin folding cof... 140 5.2e-07 1
UNIPROTKB|Q723V1 - symbol:LMOf2365_0374 "Internalin" spec... 146 5.6e-07 1
DICTYBASE|DDB_G0268578 - symbol:gefV "leucine-rich repeat... 152 5.6e-07 1
MGI|MGI:2674939 - symbol:Podn "podocan" species:10090 "Mu... 144 9.8e-07 1
UNIPROTKB|Q15435 - symbol:PPP1R7 "Protein phosphatase 1 r... 140 1.1e-06 1
UNIPROTKB|E1BAL0 - symbol:CLIP3 "Uncharacterized protein"... 141 1.8e-06 1
UNIPROTKB|Q96DZ5 - symbol:CLIP3 "CAP-Gly domain-containin... 141 1.8e-06 1
UNIPROTKB|Q5R686 - symbol:CLIP3 "CAP-Gly domain-containin... 141 1.8e-06 1
MGI|MGI:1923936 - symbol:Clip3 "CAP-GLY domain containing... 140 2.3e-06 1
RGD|1306245 - symbol:Clip3 "CAP-GLY domain containing lin... 140 2.3e-06 1
MGI|MGI:1913661 - symbol:Tbcb "tubulin folding cofactor B... 133 2.3e-06 1
RGD|1308169 - symbol:Ppp1r7 "protein phosphatase 1, regul... 136 3.1e-06 1
UNIPROTKB|D2HFU1 - symbol:PANDA_009788 "Putative uncharac... 138 3.4e-06 1
POMBASE|SPAC13D6.05 - symbol:alp11 "tubulin specific chap... 131 3.4e-06 1
UNIPROTKB|Q3T0W4 - symbol:PPP1R7 "Protein phosphatase 1 r... 135 4.0e-06 1
UNIPROTKB|Q8HXL4 - symbol:CKAP1 "Uncharacterized protein"... 131 4.1e-06 1
ZFIN|ZDB-GENE-070117-2205 - symbol:dctn1a "dynactin 1a" s... 119 4.2e-06 2
UNIPROTKB|C9JJD0 - symbol:DCTN1 "Dynactin subunit 1" spec... 114 4.3e-06 1
UNIPROTKB|C9JJN7 - symbol:DCTN1 "Dynactin subunit 1" spec... 114 4.3e-06 1
UNIPROTKB|C9JTE5 - symbol:DCTN1 "Dynactin subunit 1" spec... 114 4.3e-06 1
UNIPROTKB|C9JZA4 - symbol:DCTN1 "Dynactin subunit 1" spec... 114 4.3e-06 1
MGI|MGI:1913635 - symbol:Ppp1r7 "protein phosphatase 1, r... 134 5.2e-06 1
UNIPROTKB|Q5E951 - symbol:TBCB "Tubulin-folding cofactor ... 130 5.3e-06 1
UNIPROTKB|Q724E1 - symbol:inlE "Internalin E" species:265... 136 5.5e-06 1
ZFIN|ZDB-GENE-051113-288 - symbol:ppp1r7 "protein phospha... 133 6.1e-06 1
RGD|1309991 - symbol:Podn "podocan" species:10116 "Rattus... 137 6.3e-06 1
UNIPROTKB|Q6QI48 - symbol:Scp2 "LRRGT00160" species:10116... 137 6.3e-06 1
UNIPROTKB|A4D1F6 - symbol:LRRD1 "Leucine-rich repeat and ... 137 9.2e-06 1
WB|WBGene00011345 - symbol:dma-1 species:6239 "Caenorhabd... 135 9.5e-06 1
UNIPROTKB|Q940E8 - symbol:fea2 "Fasciated ear2" species:4... 132 2.1e-05 1
UNIPROTKB|G4N707 - symbol:MGG_03649 "Protein phosphatase ... 129 2.1e-05 1
UNIPROTKB|Q723K6 - symbol:inlA "Internalin-A" species:265... 132 3.0e-05 1
UNIPROTKB|C9J1B7 - symbol:DCTN1 "Dynactin subunit 1" spec... 106 3.2e-05 1
FB|FBgn0019968 - symbol:Khc-73 "Kinesin-73" species:7227 ... 135 3.9e-05 1
UNIPROTKB|I3LGS7 - symbol:CLIP3 "Uncharacterized protein"... 128 4.9e-05 1
UNIPROTKB|O42184 - symbol:CLIP1 "CAP-Gly domain-containin... 123 4.9e-05 3
ZFIN|ZDB-GENE-040426-1130 - symbol:chad "chondroadherin" ... 125 5.3e-05 1
CGD|CAL0006089 - symbol:orf19.6170 species:5476 "Candida ... 123 5.7e-05 1
UNIPROTKB|E1BHH6 - symbol:PODN "Uncharacterized protein" ... 128 6.4e-05 1
FB|FBgn0038504 - symbol:Sur-8 "Sur-8" species:7227 "Droso... 127 7.8e-05 1
UNIPROTKB|I3LEB7 - symbol:PODN "Uncharacterized protein" ... 127 7.8e-05 1
SGD|S000006095 - symbol:NIP100 "Large subunit of the dyna... 128 9.1e-05 1
UNIPROTKB|Q81YT0 - symbol:BAS0520 "Putative internalin" s... 129 9.1e-05 1
TIGR_CMR|BA_0552 - symbol:BA_0552 "internalin, putative" ... 129 9.1e-05 1
UNIPROTKB|Q7Z5L7 - symbol:PODN "Podocan" species:9606 "Ho... 126 9.5e-05 1
MGI|MGI:2443955 - symbol:Lrig3 "leucine-rich repeats and ... 129 9.6e-05 1
TAIR|locus:2076224 - symbol:EMB2804 "AT3G10220" species:3... 119 0.00010 1
UNIPROTKB|Q96M69 - symbol:LRGUK "Leucine-rich repeat and ... 127 0.00011 1
UNIPROTKB|F5H270 - symbol:CLIP1 "CAP-Gly domain-containin... 101 0.00011 1
UNIPROTKB|Q724D5 - symbol:LMOf2365_0289 "Leucine rich rep... 122 0.00011 1
UNIPROTKB|F1Q140 - symbol:PODN "Uncharacterized protein" ... 125 0.00012 1
WB|WBGene00011637 - symbol:T09A5.9 species:6239 "Caenorha... 121 0.00012 1
CGD|CAL0005838 - symbol:NIP100 species:5476 "Candida albi... 127 0.00012 1
UNIPROTKB|Q5A6R8 - symbol:NIP100 "Putative uncharacterize... 127 0.00012 1
RGD|1309965 - symbol:Tbcb "tubulin folding cofactor B" sp... 118 0.00013 1
POMBASE|SPAC27D7.13c - symbol:ssm4 "dynactin microtubule-... 125 0.00014 1
MGI|MGI:1921604 - symbol:Lrguk "leucine-rich repeats and ... 126 0.00014 1
UNIPROTKB|J3QQQ2 - symbol:FLII "Protein flightless-1 homo... 119 0.00014 1
UNIPROTKB|J9P0I9 - symbol:CLIP2 "Uncharacterized protein"... 125 0.00015 1
ZFIN|ZDB-GENE-061103-397 - symbol:zgc:153913 "zgc:153913"... 123 0.00015 1
FB|FBgn0020503 - symbol:CLIP-190 "Cytoplasmic linker prot... 134 0.00019 2
RGD|71066 - symbol:Lrrn3 "leucine rich repeat neuronal 3"... 124 0.00019 1
ZFIN|ZDB-GENE-061103-403 - symbol:erbb2ip "erbb2 interact... 127 0.00020 1
UNIPROTKB|E1BRU5 - symbol:E1BRU5 "Uncharacterized protein... 127 0.00021 1
ZFIN|ZDB-GENE-040718-372 - symbol:lrrc57 "leucine rich re... 116 0.00021 1
UNIPROTKB|E1BQI8 - symbol:CLIP2 "Uncharacterized protein"... 125 0.00023 2
MGI|MGI:1342286 - symbol:Flii "flightless I homolog (Dros... 126 0.00024 1
UNIPROTKB|Q9UDT6 - symbol:CLIP2 "CAP-Gly domain-containin... 125 0.00024 1
ZFIN|ZDB-GENE-041010-153 - symbol:lrrc23 "leucine rich re... 118 0.00026 1
MGI|MGI:109347 - symbol:Lum "lumican" species:10090 "Mus ... 118 0.00028 1
SGD|S000001676 - symbol:SDS22 "Regulatory subunit of the ... 118 0.00028 1
UNIPROTKB|E1BGH3 - symbol:CLIP2 "Uncharacterized protein"... 125 0.00030 2
UNIPROTKB|F1PUU4 - symbol:FLII "Uncharacterized protein" ... 125 0.00030 1
WARNING: Descriptions of 45 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2825339 [details] [associations]
symbol:PFI "AT1G71440" species:3702 "Arabidopsis
thaliana" [GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IGI] [GO:0007021
"tubulin complex assembly" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
Pfam:PF01302 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
GO:GO:0009793 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 HSSP:Q20728
EMBL:BT002403 EMBL:BT008888 EMBL:AK118835 IPI:IPI00529655
RefSeq:NP_565017.1 UniGene:At.35185 UniGene:At.48359
ProteinModelPortal:Q8GRL7 SMR:Q8GRL7 STRING:Q8GRL7 PaxDb:Q8GRL7
PRIDE:Q8GRL7 DNASU:843485 EnsemblPlants:AT1G71440.1 GeneID:843485
KEGG:ath:AT1G71440 TAIR:At1g71440 HOGENOM:HOG000241155
InParanoid:Q8GRL7 OMA:EMYVLSA PhylomeDB:Q8GRL7
ProtClustDB:CLSN2689143 ArrayExpress:Q8GRL7 Genevestigator:Q8GRL7
Uniprot:Q8GRL7
Length = 531
Score = 1240 (441.6 bits), Expect = 2.9e-126, P = 2.9e-126
Identities = 245/387 (63%), Positives = 309/387 (79%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDY-GNGKHDGSINGVRYFQAK 65
ES+ +GQRVHS ND+RR+GTVKYVG+V+GYSGTW+GVDWD G+GKH+GS+NGV YF +
Sbjct: 8 ESFIIGQRVHSLNDSRRVGTVKYVGDVEGYSGTWIGVDWDQDGDGKHNGSVNGVFYFNGR 67
Query: 66 SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQ 125
SQ S SFVR NLS GI+L +AL +RYR S+K+EEDEMYVLSA N+ VSI+L+G DKIQ
Sbjct: 68 SQSSASFVRSQNLSRGITLLQALELRYRTISTKDEEDEMYVLSAGNRRVSIQLLGGDKIQ 127
Query: 126 DKFSKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPA 183
DK S+FEELTSA+L YLGVSS G +++G+I+ NLK LDLTGNL+SDW++IGA EQLPA
Sbjct: 128 DKLSRFEELTSASLSYLGVSSLGVSSDLGSILPNLKLLDLTGNLISDWEEIGALCEQLPA 187
Query: 184 LAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
L LNLS N +S ++ LPQLK+IR+LVLN +G++W QVEIL+ SLP +EELHLMGN IS
Sbjct: 188 LTTLNLSCNSLSSDIKSLPQLKNIRVLVLNNSGLSWTQVEILRRSLPGIEELHLMGNMIS 247
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
IT SS Q F++L+LLNL+DNCI++WSE+LKL Q+ LEQLYLNKN L+RI+ N
Sbjct: 248 TITSTSSSDDQAFNSLRLLNLDDNCISDWSEVLKLSQLPCLEQLYLNKNKLSRIFQSVNG 307
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDP 363
T ES E+ PF +L CLLLG N I DLAS+D+L+ FP+L+DIRLSENP+SDP
Sbjct: 308 T--------ESSEKGSDPFPSLSCLLLGANNIGDLASVDALNGFPQLVDIRLSENPISDP 359
Query: 364 GRGGISRFAIIARLGKIKILNGSEVNS 390
RGG+ RF ++ARL K+++LNGSEV +
Sbjct: 360 VRGGVPRFVLVARLTKVQVLNGSEVRA 386
>UNIPROTKB|F1NVX8 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000938
PROSITE:PS51450 Pfam:PF01302 GO:GO:0000226 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 PROSITE:PS50053
GeneTree:ENSGT00530000063405 GO:GO:0007023 OMA:CLRNPLT
EMBL:AADN02051948 EMBL:AADN02051947 IPI:IPI00583476
Ensembl:ENSGALT00000022606 Uniprot:F1NVX8
Length = 526
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 113/385 (29%), Positives = 196/385 (50%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
LG+RV + GTV+YVG V +G WLGV+WD GKHDG+ G +YF+ + +
Sbjct: 7 LGRRVLCGTE---YGTVRYVGSVSPTAGVWLGVEWDDPQRGKHDGTYEGKQYFKCRHPRG 63
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + + G+ A++ RY G + K++ + ++E VG+D I+ K S
Sbjct: 64 GSFIRPNKANFGVDFLTAVKGRY-GLNEKQDAQNGIENTCVFGKKTVEFVGRDSIEKKQS 122
Query: 130 KFEELTSAALPYLGVSSPGAN--IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ L ++ VS G I N++ +DL+ NL++ W + Q+P L L
Sbjct: 123 QLHRLVHISVHECAVSHAGQKEEISGTCPNIRHIDLSKNLVAYWDTVIDIASQVPNLETL 182
Query: 188 NLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
++S N M S ++ + L LN TG+ W +V + P LEEL+L N+I+
Sbjct: 183 DISGNKMKFSSTSISASSAFPKLTTLALNQTGITWTEVLLCAPGWPVLEELYLTSNNITA 242
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDT 304
+ + ++Q L+LL+L +N + + S++ + + LEQL L N ++ +++P+
Sbjct: 243 LERPDN-VLQ---TLKLLDLSNNLLLDGSQLHLIGHLPRLEQLILTNNGISSVHFPD--- 295
Query: 305 IHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPG 364
A + P +L L + +N I +SI+ LD P L + NP+ D
Sbjct: 296 ------AEFGCKTKMFP--SLKHLAINDNKISQWSSINELDKLPSLQVLECRNNPLMDTE 347
Query: 365 RGGIS-RFAIIARLGKIKILNGSEV 388
+ + R IIA++ ++++LN S++
Sbjct: 348 KNPETLRQLIIAKISQLEVLNKSQI 372
>UNIPROTKB|Q5RBD9 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9601
"Pongo abelii" [GO:0007023 "post-chaperonin tubulin folding
pathway" evidence=ISS] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0005856 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007023
CTD:6905 HOVERGEN:HBG084170 EMBL:CR858712 RefSeq:NP_001125526.1
UniGene:Pab.19173 ProteinModelPortal:Q5RBD9 SMR:Q5RBD9 PRIDE:Q5RBD9
GeneID:100172438 KEGG:pon:100172438 InParanoid:Q5RBD9
Uniprot:Q5RBD9
Length = 527
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 120/386 (31%), Positives = 198/386 (51%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+GQRV N TV++ G V +G WLGV+WD GKHDGS G YFQ +
Sbjct: 10 IGQRVE-VNGEH--ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFQCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + ++ G A++ RY E EE+ + +++ NK V E +G D I + S
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPV--ETIGFDSIMKQQS 124
Query: 130 KFEELTSAALPYLGVSSPGANIGTI--VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L VS G G N++++DL+ NLLS W ++ +QL L VL
Sbjct: 125 QLSKLQEVSLRNCAVSCAGEKGGVAEGCPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVL 184
Query: 188 NLSNNLMS----KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
N+S N + +TG L ++++LVLN TG+ W +V P LEEL+L N+I
Sbjct: 185 NVSENKLKFPSGSVLTGT--LSALKVLVLNQTGITWAEVLRCAMGCPGLEELYLESNNIF 242
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ +++P+
Sbjct: 243 -ISERPTDVLQ---TVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDIGISSLHFPD-- 296
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDP 363
A + S P +L L++ +N I + + LD P L + NP++
Sbjct: 297 -------AGIGCKTSLFP--SLKYLVVNDNQISQWSFFNELDKLPSLRALSCLRNPLTKE 347
Query: 364 GRGG-ISRFAIIARLGKIKILNGSEV 388
+ +R IIA +G++K LN E+
Sbjct: 348 DKEAETARLLIIASIGQLKTLNKCEI 373
>UNIPROTKB|Q32KS0 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9913
"Bos taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0014889 "muscle atrophy" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] Reactome:REACT_17065
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450 Pfam:PF01302
GO:GO:0005829 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 Reactome:REACT_103209 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 InterPro:IPR025875
Pfam:PF12799 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:BT026156
EMBL:BC109955 IPI:IPI00713122 RefSeq:NP_001033121.1 UniGene:Bt.3254
ProteinModelPortal:Q32KS0 SMR:Q32KS0 STRING:Q32KS0 PRIDE:Q32KS0
Ensembl:ENSBTAT00000018249 GeneID:505066 KEGG:bta:505066 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 InParanoid:Q32KS0
OMA:CLRNPLT OrthoDB:EOG41NTKV NextBio:20866964 Uniprot:Q32KS0
Length = 528
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 122/382 (31%), Positives = 200/382 (52%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+G+RV N TV++ G V +G WLGV+WD GKHDGS G YF+ + +
Sbjct: 10 IGRRVE-VNGEH--ATVRFSGLVPPVAGLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTA 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESS-KEEEDEMYVLSASNKHVSIELVGKDKIQDKF 128
GSF+R H ++ G+ A++ RY E KEEE E V+ NK V E +G D + +
Sbjct: 67 GSFIRPHKVNFGVDFLTAIKNRYVLEDEPKEEETEQIVI-IGNKPV--ETIGFDSVIKQQ 123
Query: 129 SKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAV 186
S+ +L +L V+ G I N++ +DL+ NLLS W+++ +QL L V
Sbjct: 124 SQLSKLQDVSLRNCAVNGAGDKGEIAKACPNIRSIDLSKNLLSSWEEVIDIADQLKHLEV 183
Query: 187 LNLSNN-LMSKEVTGLPQ--LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
LNLS N L S + P ++++LVLN TGV W +V P LE+L+L N+I
Sbjct: 184 LNLSENKLTSPSSSPSPTGTFPTLKVLVLNRTGVTWAEVLRCASGWPVLEKLYLESNNII 243
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ I++P+
Sbjct: 244 -ISERPTDVLQ---TVKLLDLSSNQLIDENQLFLIAYLPRLEQLILSDIGISSIHFPD-- 297
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDP 363
A + S P +L L+L +N I + ++ LD L + + NP+++
Sbjct: 298 -------AGIGCKTSMFP--SLQYLVLNDNQIAQWSFMNELDKLQSLHALSCTRNPLTEG 348
Query: 364 GRGG-ISRFAIIARLGKIKILN 384
+ +R IIAR+G+++ LN
Sbjct: 349 SKDAQTTRQFIIARIGQLRTLN 370
>UNIPROTKB|Q15813 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9606
"Homo sapiens" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006457 "protein folding" evidence=TAS] [GO:0007023
"post-chaperonin tubulin folding pathway" evidence=IDA] [GO:0051087
"chaperone binding" evidence=TAS] [GO:0005874 "microtubule"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0051084 "'de novo' posttranslational protein
folding" evidence=TAS] Reactome:REACT_17015 InterPro:IPR000938
Pfam:PF01302 GO:GO:0005737 GO:GO:0000226 GO:GO:0008344
GO:GO:0009791 GO:GO:0051084 GO:GO:0048589 GO:GO:0051087
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 GO:GO:0014889
GO:GO:0048936 GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513
HOVERGEN:HBG084170 OrthoDB:EOG41NTKV EMBL:U61232 EMBL:BT007086
EMBL:AL357556 EMBL:AL672237 EMBL:BC008654 IPI:IPI00018402
RefSeq:NP_001072983.1 RefSeq:NP_003184.1 UniGene:Hs.740537
ProteinModelPortal:Q15813 SMR:Q15813 STRING:Q15813
PhosphoSite:Q15813 DMDM:74762146 PaxDb:Q15813 PeptideAtlas:Q15813
PRIDE:Q15813 DNASU:6905 Ensembl:ENST00000366601
Ensembl:ENST00000406207 GeneID:6905 KEGG:hsa:6905 UCSC:uc001hwz.1
GeneCards:GC01P235530 HGNC:HGNC:11582 HPA:HPA026552 HPA:HPA026557
HPA:HPA026559 MIM:241410 MIM:244460 MIM:604934 neXtProt:NX_Q15813
Orphanet:93324 Orphanet:2323 PharmGKB:PA36346 InParanoid:Q15813
PhylomeDB:Q15813 GenomeRNAi:6905 NextBio:27001 ArrayExpress:Q15813
Bgee:Q15813 CleanEx:HS_TBCE Genevestigator:Q15813
GermOnline:ENSG00000116957 Uniprot:Q15813
Length = 527
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 116/386 (30%), Positives = 197/386 (51%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+G+RV N TV++ G V +G WLGV+WD GKHDGS G YF+ +
Sbjct: 10 IGRRVE-VNGEH--ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + ++ G A++ RY E EE+ + +++ NK V E +G D I + S
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPV--ETIGFDSIMKQQS 124
Query: 130 KFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L VS G + N++++DL+ NLLS W ++ +QL L VL
Sbjct: 125 QLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVL 184
Query: 188 NLSNNLMS----KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
N+S N + +TG L +++LVLN TG+ W +V P LEEL+L N+I
Sbjct: 185 NVSENKLKFPSGSVLTGT--LSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNNIF 242
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ +++P+
Sbjct: 243 -ISERPTDVLQ---TVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPD-- 296
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDP 363
A + S P +L L++ +N I + + L+ P L + NP++
Sbjct: 297 -------AGIGCKTSMFP--SLKYLVVNDNQISQWSFFNELEKLPSLRALSCLRNPLTKE 347
Query: 364 GRGG-ISRFAIIARLGKIKILNGSEV 388
+ +R IIA +G++K LN E+
Sbjct: 348 DKEAETARLLIIASIGQLKTLNKCEI 373
>RGD|1305533 [details] [associations]
symbol:Tbce "tubulin folding cofactor E" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=ISO;ISS] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008344 "adult
locomotory behavior" evidence=IEA;ISO] [GO:0009791 "post-embryonic
development" evidence=IEA;ISO] [GO:0014889 "muscle atrophy"
evidence=IEA;ISO] [GO:0048589 "developmental growth"
evidence=IEA;ISO] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302
RGD:1305533 GO:GO:0005737 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706
GO:GO:0014889 GO:GO:0048936 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
OMA:CLRNPLT OrthoDB:EOG41NTKV EMBL:BC089833 IPI:IPI00364903
RefSeq:NP_001012161.1 UniGene:Rn.3547 ProteinModelPortal:Q5FVQ9
SMR:Q5FVQ9 STRING:Q5FVQ9 PhosphoSite:Q5FVQ9 PRIDE:Q5FVQ9
Ensembl:ENSRNOT00000040743 GeneID:361255 KEGG:rno:361255
UCSC:RGD:1305533 InParanoid:Q5FVQ9 NextBio:675707
Genevestigator:Q5FVQ9 GermOnline:ENSRNOG00000029667 Uniprot:Q5FVQ9
Length = 524
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 120/394 (30%), Positives = 193/394 (48%)
Query: 1 MNDCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGV 59
M+D P +G+RV + TV++ G V +G WLGV+WD GKHDGS G
Sbjct: 1 MSDILPLDV-IGRRVEVNGE---YATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGT 56
Query: 60 RYFQAKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELV 119
YF+ + GSFVR + ++ G AL+ RY +++++ L +K V + +
Sbjct: 57 MYFKCRHPTGGSFVRPNIVNFGEDFLTALKKRYVLTDGPDDDEKSCSLKVGSKQV--QTI 114
Query: 120 GKDKIQDKFSKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAF 177
G + I K S+ L +L VS G I N++ +DL+ NLLS W ++
Sbjct: 115 GFEHITKKQSQLRSLQDISLWKCAVSCAGERGRIAEACPNIRVVDLSKNLLSTWDEVILI 174
Query: 178 GEQLPALAVLNLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEE 234
EQL L L+LS N + S T +++ LVLN TG+ W +V S P L+E
Sbjct: 175 AEQLKDLEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVLQE 234
Query: 235 LHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNL 294
L+L N IS +S V NL+LL+L N + S++ + + LE L L+ L
Sbjct: 235 LYLKSNGIS----ISERPVNALQNLRLLDLSSNPSIDESQLCLIAYLPRLEHLLLSDIGL 290
Query: 295 NRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIR 354
+ I++P+ + + S F L L++ +N I + + I+ LD L +
Sbjct: 291 SSIHFPDAE-----IGCKTSM------FPALTYLIVNDNQISEWSFINELDKLQSLQALS 339
Query: 355 LSENPVSDPGRGGISRFAIIARLGKIKILNGSEV 388
+ NP++ +G + IIA++G++K LN ++
Sbjct: 340 CARNPLT---KGDKAEEIIIAKIGQLKTLNRCQI 370
>FB|FBgn0033055 [details] [associations]
symbol:tbce "tubulin-specific chaperone E" species:7227
"Drosophila melanogaster" [GO:0007021 "tubulin complex assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0046785
"microtubule polymerization" evidence=IGI;IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000938 Pfam:PF01302 EMBL:AE013599 GO:GO:0005737
GO:GO:0022008 GO:GO:0007274 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0008582 GO:GO:0046785
RefSeq:NP_995747.1 ProteinModelPortal:A1Z6J4 SMR:A1Z6J4
STRING:A1Z6J4 PaxDb:A1Z6J4 PRIDE:A1Z6J4 GeneID:35532 UCSC:CG7861-RA
FlyBase:FBgn0033055 eggNOG:KOG3207 InParanoid:A1Z6J4
OrthoDB:EOG4T4B9T PhylomeDB:A1Z6J4 NextBio:793888 Bgee:A1Z6J4
Uniprot:A1Z6J4
Length = 542
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 122/400 (30%), Positives = 204/400 (51%)
Query: 9 YKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYG-NGKHDGSINGVRYFQAKSQ 67
Y LG R+ ++ GTV+YVGEV G+ G+WLG++WD G GKH+G ++G RYFQ ++
Sbjct: 12 YPLGTRIKIGDN---YGTVRYVGEVSGHMGSWLGIEWDDGLRGKHNGIVDGKRYFQTQTP 68
Query: 68 KSGSFVRVHNLSPGISLPEALRVRYRG-ESSKEEEDEMYVLSASNKHVSIELVGKDKIQD 126
GSF+R + P +L +A R RY +SS +E + AS + E+VG DKI
Sbjct: 69 TGGSFIRPGKVGPCATLEDAARERYLNYDSSNVDESLIREAQASLQASLFEVVGMDKIAR 128
Query: 127 KFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAV 186
K SKFE+L ++ V++ G +T+L L+++ L+ +W+ + + +QLP+L
Sbjct: 129 KQSKFEQLEEVSVDQTPVNAAGYL--KELTHLTTLNVSHTLIWNWEIVASIAQQLPSLTN 186
Query: 187 LNLSNNLM----SKEVTGL-PQLKSI-RILVLNCTGVNWMQVEILKHSLPALEELHLMGN 240
LNLS+N + S ++T L P + + RI + +C +W V P + L L N
Sbjct: 187 LNLSSNRLVLPTSSQITELEPSFRQLKRINLRSCGFSDWKDVMHTALLWPNILSLGLQEN 246
Query: 241 SISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYP 300
S+ ++ V + F L L+L I ++ ++ KL + +L L + +N + I P
Sbjct: 247 SLGQLAEVDRTKI--FKQLHELDLHRTNIMDFDQVTKLGNLTTLRLLNIMENGIEEIKLP 304
Query: 301 NNDTIHELVSAHESHEESYL---PFQN-LCCLLLGNN-----MIEDLA-SIDSLDSFPKL 350
+ D+ E ++ S E+ L P N + G M+ A + + LD P+L
Sbjct: 305 DCDS-QEKLNIFVSLEQLNLLHNPIWNEVGQRFFGTKKFTVIMLSSQADAFNELDKLPQL 363
Query: 351 MDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVNS 390
RLS+ P + A+ A + ++ +N +EV +
Sbjct: 364 K--RLSKTPHLKSNFDEMFSKAV-ASIASLQFINKAEVTA 400
>MGI|MGI:1917680 [details] [associations]
symbol:Tbce "tubulin-specific chaperone E" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006457 "protein folding"
evidence=TAS] [GO:0007021 "tubulin complex assembly" evidence=TAS]
[GO:0007023 "post-chaperonin tubulin folding pathway" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0008344 "adult
locomotory behavior" evidence=IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0014889 "muscle atrophy"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] [GO:0051082 "unfolded protein binding" evidence=TAS]
InterPro:IPR000938 MGI:MGI:1917680 Pfam:PF01302 GO:GO:0005737
GO:GO:0000226 GO:GO:0005856 GO:GO:0051082 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 GO:GO:0007021 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 OMA:CLRNPLT
OrthoDB:EOG41NTKV EMBL:AY082332 EMBL:AK167383 EMBL:BC050206
IPI:IPI00229931 RefSeq:NP_848027.1 UniGene:Mm.260209 PDB:1WJN
PDBsum:1WJN ProteinModelPortal:Q8CIV8 SMR:Q8CIV8 STRING:Q8CIV8
PhosphoSite:Q8CIV8 PaxDb:Q8CIV8 PRIDE:Q8CIV8
Ensembl:ENSMUST00000039894 GeneID:70430 KEGG:mmu:70430
UCSC:uc007pmq.1 InParanoid:Q8CIV8 EvolutionaryTrace:Q8CIV8
NextBio:331607 Bgee:Q8CIV8 CleanEx:MM_TBCE Genevestigator:Q8CIV8
GermOnline:ENSMUSG00000039233 Uniprot:Q8CIV8
Length = 524
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 117/394 (29%), Positives = 190/394 (48%)
Query: 1 MNDCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGV 59
M+D P +G+RV + TV++ G V +G WLGV+WD GKHDGS G
Sbjct: 1 MSDILPLDV-IGRRVEVNGE---YATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGT 56
Query: 60 RYFQAKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELV 119
YF+ + GSFVR ++ G AL+ RY E ++++ L +K V + +
Sbjct: 57 MYFKCRHPTGGSFVRPSKVNFGDDFLTALKKRYVLEDGPDDDENSCSLKVGSKQV--QTI 114
Query: 120 GKDKIQDKFSKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAF 177
G + I K S+ L +L VS G I N++ ++L+ NLLS W ++
Sbjct: 115 GFEHITKKQSQLRALQDISLWNCAVSHAGEQGRIAEACPNIRVVNLSKNLLSTWDEVVLI 174
Query: 178 GEQLPALAVLNLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEE 234
EQL L L+LS N + S T +++ LVLN TG+ W +V S P LEE
Sbjct: 175 AEQLKDLEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVLEE 234
Query: 235 LHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNL 294
L+L N+IS +S V ++LL+L N + S++ + + LE L L+ L
Sbjct: 235 LYLKSNNIS----ISERPVNVLQKMRLLDLSSNPSIDESQLSLIADLPRLEHLVLSDIGL 290
Query: 295 NRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIR 354
+ I++P+ + + S F L L++ +N I + + I+ LD L +
Sbjct: 291 SSIHFPDAE-----IGCKTSM------FPALKYLIVNDNQISEWSFINELDKLQSLQALS 339
Query: 355 LSENPVSDPGRGGISRFAIIARLGKIKILNGSEV 388
+ NP+S + + IIA++ +++ LN ++
Sbjct: 340 CTRNPLSKADK---AEEIIIAKIAQLRTLNRCQI 370
>ZFIN|ZDB-GENE-051030-120 [details] [associations]
symbol:tbce "tubulin folding cofactor E"
species:7955 "Danio rerio" [GO:0007023 "post-chaperonin tubulin
folding pathway" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000938 Pfam:PF01302
ZFIN:ZDB-GENE-051030-120 GO:GO:0005737 GO:GO:0005856
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 eggNOG:NOG245706 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
EMBL:BC085669 IPI:IPI00507049 RefSeq:NP_001035078.2
UniGene:Dr.84734 ProteinModelPortal:Q5U378 SMR:Q5U378 STRING:Q5U378
Ensembl:ENSDART00000065585 Ensembl:ENSDART00000127915 GeneID:664760
KEGG:dre:664760 InParanoid:Q5U378 NextBio:20902338
ArrayExpress:Q5U378 Bgee:Q5U378 Uniprot:Q5U378
Length = 521
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 107/297 (36%), Positives = 164/297 (55%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+G+RV D R GTV+YVG V +G WLGV+WD+ GKHDGS +GVRYF +
Sbjct: 7 VGRRV--CCDGER-GTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYFTCRHPTG 63
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSFVR S G+ AL+ RY E + +EM + S+K ++ +VG + ++ K S
Sbjct: 64 GSFVRPQKASFGVDYVTALKQRYEVEIEEVTAEEMKI---SSK--TVVMVGFENVKKKQS 118
Query: 130 KFEELTSAALPYLGVSSPGAN--IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ LT L VS+PG I ++ LDL+GNLLS W+ + A EQL +L L
Sbjct: 119 -VKNLTEVGLRRCEVSAPGPENEIRNTTPFVQSLDLSGNLLSSWEVLAAITEQLDSLQEL 177
Query: 188 NLSNNLMSKEVTGLPQ-LKS----IRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
+LS+N +S ++ P L S +R+L +N + W QV +EEL+L N+I
Sbjct: 178 HLSHNRLS--ISSAPSSLSSAFSHLRVLSINSCALTWTQVLHCAPMWQQVEELYLADNNI 235
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYY 299
+E+ ++Q L +L+L +N IA+ +L++ + LE+L L+ +L+ I +
Sbjct: 236 TELLRPEH-VLQA---LTVLDLSNNQIAQ-ETVLEISHLPRLERLNLSSTSLSEIKF 287
Score = 284 (105.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 106/374 (28%), Positives = 183/374 (48%)
Query: 25 GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGISL 84
GTV+YVG V +G WLGV+WD+ + + +G V +
Sbjct: 18 GTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYFTCRHPTGGSF-VRPQKASFGV 76
Query: 85 PEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGV 144
++ R E EE + S+K ++ +VG + ++ K S + LT L V
Sbjct: 77 DYVTALKQRYEVEIEEVTAEE-MKISSK--TVVMVGFENVKKKQS-VKNLTEVGLRRCEV 132
Query: 145 SSPGAN--IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLP 202
S+PG I ++ LDL+GNLLS W+ + A EQL +L L+LS+N +S ++ P
Sbjct: 133 SAPGPENEIRNTTPFVQSLDLSGNLLSSWEVLAAITEQLDSLQELHLSHNRLS--ISSAP 190
Query: 203 Q-LKS----IRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFD 257
L S +R+L +N + W QV +EEL+L N+I+E+ ++Q
Sbjct: 191 SSLSSAFSHLRVLSINSCALTWTQVLHCAPMWQQVEELYLADNNITELLRPEH-VLQA-- 247
Query: 258 NLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEE 317
L +L+L +N IA+ +L++ + LE+L L+ +L+ I + + V A + +
Sbjct: 248 -LTVLDLSNNQIAQ-ETVLEISHLPRLERLNLSSTSLSEIKFSD-------VPAGK---K 295
Query: 318 SYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRG-GISRFAIIAR 376
+ L F L LLL +N I + ++ L+ P L+ + NP+ + +R +IAR
Sbjct: 296 TTL-FPALKELLLDDNNISEWRVVNELEKLPSLVYLSCRRNPLLHKEKNLETARQIMIAR 354
Query: 377 LGKIKILNGSEVNS 390
LG++++L+ ++ S
Sbjct: 355 LGQLELLDMRQILS 368
>UNIPROTKB|Q5U508 [details] [associations]
symbol:tbce "Tubulin-specific chaperone E" species:8355
"Xenopus laevis" [GO:0007023 "post-chaperonin tubulin folding
pathway" evidence=ISS] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0005856 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007023
CTD:6905 HOVERGEN:HBG084170 EMBL:BC084879 RefSeq:NP_001088530.1
UniGene:Xl.18306 ProteinModelPortal:Q5U508 SMR:Q5U508 PRIDE:Q5U508
GeneID:495403 KEGG:xla:495403 Xenbase:XB-GENE-865843 Uniprot:Q5U508
Length = 522
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 109/344 (31%), Positives = 174/344 (50%)
Query: 26 TVKYVGEVQGYSGTWLGVDWD-YGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGISL 84
TV+YVG V G WLGV+WD + GKH+G+ G +YF GSF+R+ + G+
Sbjct: 22 TVRYVGNVPPTPGLWLGVEWDNHLRGKHNGTHEGTKYFTCSHPTGGSFIRLKKANFGVDF 81
Query: 85 PEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGV 144
ALR RY K E++E V+ ++ELVG + IQ++ SK +L +L V
Sbjct: 82 LAALRKRY---GLKSEQNEELVIGKK----TVELVGFESIQEEQSKLNKLKDVSLRECAV 134
Query: 145 SSPGANIGTIV---TNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLM--SKEVT 199
S+ G G I N+ DL+ NL S W+ + QL L L+LS N + S +
Sbjct: 135 SNAGEK-GQICHSCPNIMTADLSKNLFSSWESLAHISSQLENLTSLDLSENKLNPSSNPS 193
Query: 200 GLP-QLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDN 258
L ++++L LN TG+ W ++ PALEELHL+ N IS + P V N
Sbjct: 194 SLATSFCNLKVLSLNRTGMKWNEILQCASMWPALEELHLVSNDISLL---EQP-VNNLQN 249
Query: 259 LQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEES 318
L +L++ +N I + +++ + + L+Q+ ++ N ++ I +P+ D H + S
Sbjct: 250 LTILDISNNKIVDGNQLHTIAFLPRLKQVIVSNNIISSISFPDVDFGHTAMFI--SLTSL 307
Query: 319 YLPFQNLC--CLLLGNNMIEDLASIDSLDSFPK-LMDIRLSENP 359
+ N+ C++ N + L ++SL+ LMD L +NP
Sbjct: 308 AVNGNNISEWCVI---NELHKLLHLESLNCHGNPLMD--LDKNP 346
Score = 263 (97.6 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 85/298 (28%), Positives = 144/298 (48%)
Query: 98 KEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIV-- 155
K E++E V+ ++ELVG + IQ++ SK +L +L VS+ G G I
Sbjct: 92 KSEQNEELVIGKK----TVELVGFESIQEEQSKLNKLKDVSLRECAVSNAGEK-GQICHS 146
Query: 156 -TNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLM--SKEVTGLP-QLKSIRILV 211
N+ DL+ NL S W+ + QL L L+LS N + S + L ++++L
Sbjct: 147 CPNIMTADLSKNLFSSWESLAHISSQLENLTSLDLSENKLNPSSNPSSLATSFCNLKVLS 206
Query: 212 LNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAE 271
LN TG+ W ++ PALEELHL+ N IS + P V NL +L++ +N I +
Sbjct: 207 LNRTGMKWNEILQCASMWPALEELHLVSNDISLL---EQP-VNNLQNLTILDISNNKIVD 262
Query: 272 WSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLG 331
+++ + + L+Q+ ++ N ++ I +P+ D H + F +L L +
Sbjct: 263 GNQLHTIAFLPRLKQVIVSNNIISSISFPDVDFGHTAM------------FISLTSLAVN 310
Query: 332 NNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGIS-RFAIIARLGKIKILNGSEV 388
N I + I+ L L + NP+ D + + R IIA++ +K LN +E+
Sbjct: 311 GNNISEWCVINELHKLLHLESLNCHGNPLMDLDKNPETVRQLIIAKIENLKFLNKTEI 368
>UNIPROTKB|B7Z3P1 [details] [associations]
symbol:TBCE "cDNA FLJ59210, highly similar to
Tubulin-specific chaperone E" species:9606 "Homo sapiens"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000938 InterPro:IPR001931 Pfam:PF01249
Pfam:PF01302 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 HOVERGEN:HBG084170 OMA:CLRNPLT EMBL:AL357556
EMBL:AL672237 UniGene:Hs.740537 HGNC:HGNC:11582 EMBL:AK296185
IPI:IPI00922443 SMR:B7Z3P1 STRING:B7Z3P1 Ensembl:ENST00000543662
UCSC:uc010pxr.1 Uniprot:B7Z3P1
Length = 578
Score = 312 (114.9 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 110/378 (29%), Positives = 181/378 (47%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+G+RV N TV++ G V +G WLGV+WD GKHDGS G YF+ +
Sbjct: 10 IGRRVE-VNGEH--ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + ++ G A++ RY E EE+ + +++ NK V E +G D I + S
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPV--ETIGFDSIMKQQS 124
Query: 130 KFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L VS G + N++++DL+ NLLS W ++ +QL L VL
Sbjct: 125 QLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVL 184
Query: 188 NLSNNLMS----KEVTGLPQLKSIRILVLNCTGVNWMQVEIL----KHSLPALEELH-LM 238
N+S N + +TG L +++LVLN TG+ W + +H L ++ +
Sbjct: 185 NVSENKLKFPSGSVLTGT--LSVLKVLVLNQTGITWAEAHAQCGGSRHGLDMQKDASKFV 242
Query: 239 GNSISEITPVSSPIVQGFDNLQL-LNLED--NCIAEWSEILKLCQIRSLEQLYLNKNNLN 295
+ + S+ I+ D+ + +N+ C+A C LE+LYL NN+
Sbjct: 243 DLCVLQKCSTSNCIISAKDHTSMRMNVAKVLRCVAG-------CP--GLEELYLESNNIF 293
Query: 296 RIYYPNN--DTIHEL-VSAHESHEES--YL--PFQNLCCLLLGNNMIEDL----ASIDSL 344
P + T+ L +S+++ +E+ YL L L+L + I L A I
Sbjct: 294 ISERPTDVLQTVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPDAGIGCK 353
Query: 345 DS-FPKLMDIRLSENPVS 361
S FP L + +++N +S
Sbjct: 354 TSMFPSLKYLVVNDNQIS 371
Score = 129 (50.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 41/160 (25%), Positives = 81/160 (50%)
Query: 230 PALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYL 289
P LEEL+L N+I I+ + ++Q ++LL+L N + + +++ + + LEQL L
Sbjct: 280 PGLEELYLESNNIF-ISERPTDVLQ---TVKLLDLSSNQLIDENQLYLIAHLPRLEQLIL 335
Query: 290 NKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPK 349
+ ++ +++P+ A + S P +L L++ +N I + + L+ P
Sbjct: 336 SDTGISSLHFPD---------AGIGCKTSMFP--SLKYLVVNDNQISQWSFFNELEKLPS 384
Query: 350 LMDIRLSENPVSDPGRGG-ISRFAIIARLGKIKILNGSEV 388
L + NP++ + +R IIA +G++K LN E+
Sbjct: 385 LRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEI 424
>DICTYBASE|DDB_G0269990 [details] [associations]
symbol:tbcE "tubulin binding cofactor E"
species:44689 "Dictyostelium discoideum" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
dictyBase:DDB_G0269990 Pfam:PF01302 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005856 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799 RefSeq:XP_646451.1
HSSP:Q8CI96 ProteinModelPortal:Q55CN0 EnsemblProtists:DDB0266639
GeneID:8617411 KEGG:ddi:DDB_G0269990 OMA:LVWETGE Uniprot:Q55CN0
Length = 525
Score = 252 (93.8 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 60/193 (31%), Positives = 105/193 (54%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAK 65
E + +G+RV D +GT++Y G+V G+ G W G++WD GKH G++ G +YF+
Sbjct: 11 EYFYIGERVKG--DDGSVGTIRYQGKVDGFEGNWYGIEWDDPKRGKHQGTVKGKQYFKCI 68
Query: 66 SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNK-HVSIELVGKDKI 124
++ SGSF++ L G + +++ ++ + + D++YV S + I+++G ++
Sbjct: 69 NKGSGSFMKYEKLIKGETFMKSISDKFHQKI--DNYDDLYVDSTKEDIKIQIQMIGMNQT 126
Query: 125 QDKFSKFEELTSAALPYLGVSSPGAN--IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLP 182
++ KF T + YL +S + I NL EL+L+ LL+ W I +QLP
Sbjct: 127 RENQKKFIAQTLLSASYLPISEIDESPLIYNNFKNLIELNLSNCLLNSWTQIVKLLKQLP 186
Query: 183 ALAVLNLSNNLMS 195
L L+L NN +S
Sbjct: 187 NLNRLHLCNNRLS 199
Score = 119 (46.9 bits), Expect = 0.00045, P = 0.00045
Identities = 52/185 (28%), Positives = 84/185 (45%)
Query: 184 LAVLNLSNNLMS---KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGN 240
L LNLSN L++ + V L QL ++ L L C ++ K + + E GN
Sbjct: 162 LIELNLSNCLLNSWTQIVKLLKQLPNLNRLHL-CNNRLSFNIDEFKKEVNSNNEY---GN 217
Query: 241 SISEITPVSSPIVQGFDNLQLLNLEDN-CIAEWSEILKLC-QIRSLEQLYLNKNNLNRIY 298
SI + +V NL ++ + C + I +C S+E + L K+ LN
Sbjct: 218 SIDDCNVKDLILVNS--NLSNWSIVSSICKYLFKNIESICLSSNSIENINLFKSILNNDN 275
Query: 299 YPNNDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASI-DSLDSFPKLMDIRLSE 357
N+ +E+V + + YL F L L L NN I+ I SL + P+L ++ L+
Sbjct: 276 ENENENENEIVEQQQQQQPQYL-FPTLKSLDLANNNIKSFNDILSSLGNLPQLTELNLNN 334
Query: 358 NPVSD 362
N ++D
Sbjct: 335 NQITD 339
Score = 112 (44.5 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 256 FDNLQLLNLEDNCIAEWSEILK-LCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHES 314
F L+ L+L +N I +++IL L + L +L LN N + I + N D + ++S
Sbjct: 298 FPTLKSLDLANNNIKSFNDILSSLGNLPQLTELNLNNNQITDIEF-NGD----VDDGNKS 352
Query: 315 HEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSD 362
+ F+NL + L NN I D +D LD L ++ NP+ D
Sbjct: 353 NNGKTNQFKNLKRIYLSNNKINDWKYLDKLDELQSLDELSFRNNPIVD 400
>UNIPROTKB|G4NCM1 [details] [associations]
symbol:MGG_00378 "Tubulin-specific chaperone E"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
Pfam:PF01302 EMBL:CM001235 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
RefSeq:XP_003718699.1 ProteinModelPortal:G4NCM1
EnsemblFungi:MGG_00378T0 GeneID:2674874 KEGG:mgr:MGG_00378
Uniprot:G4NCM1
Length = 616
Score = 298 (110.0 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 114/374 (30%), Positives = 180/374 (48%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDY-GNGKHDGSINGVRYFQ--A 64
++++GQR+ S + A + T++++G+V G SGTWLGV+WD GKHDG GVRYF +
Sbjct: 4 THQVGQRL-SFDGA--LCTIRFIGDVAGTSGTWLGVEWDDPSRGKHDGCHKGVRYFACLS 60
Query: 65 KSQKSGSFVRVHNLS-PGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDK 123
+S + SFVR S P S EA+R +Y E + + S K V+ E VG DK
Sbjct: 61 RSPTAASFVRPTRPSDPPRSFIEAVRDKYADEPVGDAASRPKEIVISGK-VAEE-VGFDK 118
Query: 124 IQDKFSKFEELT-----SAALPYLGVSSP----GANIGTIVT--NLKELDLTGNLLSDWK 172
I+ + ++ ELT A + + VSSP GA+ T + ELD++ NL+SD
Sbjct: 119 IRRRMAQLHELTIIIVDGARISF--VSSPDGSSGADCSVKETCPRIVELDISRNLISDMS 176
Query: 173 DIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGV----NWMQVEILKHS 228
+ QL L L L+ N + PQL S + ++ N T + + E +
Sbjct: 177 TVVDICSQLSDLRNLRLNGNRFWNVLDKSPQLASAKDVLGNITELAIDETLLSWEEICQI 236
Query: 229 LPALEELHLMGNSISEITPVSSPIVQGFD-NLQLLNLEDNCIAEWSEILKLCQIRSLEQL 287
L + +++++ + +P +L L+LE N S++ L + SL L
Sbjct: 237 TSWFGSLQNLSCDLNQLSSIPAPFPATMSQSLTTLSLEFNEFGSLSDLAPLATLSSLRNL 296
Query: 288 YLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSL-DS 346
L NN++ + +DT V + + L + N I + +D+L DS
Sbjct: 297 ILKGNNISTV--AKDDTTPGPVFSSSIYH-----------LDISYNRIATWSFVDALPDS 343
Query: 347 FPKLMDIRLSENPV 360
FP L +RL+ NPV
Sbjct: 344 FPGLRSLRLAHNPV 357
>WB|WBGene00019503 [details] [associations]
symbol:K07H8.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0008340 GO:GO:0009792
GO:GO:0071688 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00530000063405 OMA:CLRNPLT EMBL:FO081300 PIR:T16278
PIR:T33025 RefSeq:NP_501395.1 ProteinModelPortal:Q20068 SMR:Q20068
STRING:Q20068 PaxDb:Q20068 EnsemblMetazoa:K07H8.1 GeneID:177624
KEGG:cel:CELE_K07H8.1 UCSC:K07H8.1 CTD:177624 WormBase:K07H8.1
HOGENOM:HOG000016489 InParanoid:Q20068 NextBio:897660
Uniprot:Q20068
Length = 493
Score = 272 (100.8 bits), Expect = 8.7e-22, P = 8.7e-22
Identities = 110/394 (27%), Positives = 179/394 (45%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGY-SGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQ 67
++GQRV + + TV+Y+GEV GY S W+G++WD GKHDG + G RYFQ +
Sbjct: 2 EIGQRVRINFE---VATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHP 58
Query: 68 KSGSFVRVHNLSPG-ISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQD 126
GS ++ H + P L ++ RY E S E E E L+ SNK IEL+G D+
Sbjct: 59 NGGSLMK-HEIVPKPTDLLFEIKDRYIEEESVETEIE---LAQSNK--KIELIGMDQTAA 112
Query: 127 KFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAV 186
K S E+L + L V P ++ +EL+L GNLL WK + E P +
Sbjct: 113 KQSNIEKLINIVLDNRSVGFPPSSDSPQFILCRELNLYGNLLYKWKTVRQILEYFPRIQE 172
Query: 187 LNLSNNLMS--------KEVTGLPQL--KSIRILVLNCTGVNWMQVEILKHSLPALEELH 236
LNL N M E G + S + LV++ ++ ++ + P+ ++
Sbjct: 173 LNLRRNRMQCFNEEEDDDESEGDDHVYSDSCKKLVISECNLSENSIDSILLRFPSTSDVV 232
Query: 237 LMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
GN ++ + VS + L L+LEDN ++L+ ++ NL +
Sbjct: 233 AFGNDLTRFS-VSEAVSS---RLTSLDLEDN------------PFKTLDSIHGTFPNLTQ 276
Query: 297 IYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLS 356
+ N +++ + S + F L L + N I + S++S+ S L +
Sbjct: 277 LSVANCG-----ITSLNGFDGS-IKFPKLEYLNIKRNSIVEWKSVNSIRSLKSLKRLLFD 330
Query: 357 ENPVSDPGRGGISRFAI-IARLGKIKILNGSEVN 389
+S G+ + I IA+L + LN +V+
Sbjct: 331 CKKLST--EKGVHAYEIVIAKLSTLIDLNRFDVS 362
>SGD|S000000809 [details] [associations]
symbol:PAC2 "Microtubule effector required for tubulin
heterodimer formation" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IGI;ISS] [GO:0007021
"tubulin complex assembly" evidence=IGI] [GO:0072668 "tubulin
complex biogenesis" evidence=IMP] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000938 SGD:S000000809 Pfam:PF01302
GO:GO:0005737 GO:GO:0006457 EMBL:BK006939 EMBL:U18778 GO:GO:0005874
GO:GO:0007021 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 OrthoDB:EOG4WWVTT
EMBL:U16814 PIR:S50465 RefSeq:NP_010922.1 ProteinModelPortal:P39937
SMR:P39937 DIP:DIP-2342N IntAct:P39937 MINT:MINT-475566
STRING:P39937 PaxDb:P39937 EnsemblFungi:YER007W GeneID:856724
KEGG:sce:YER007W CYGD:YER007w GeneTree:ENSGT00530000063405
OMA:AYGVEWD NextBio:982823 Genevestigator:P39937 GermOnline:YER007W
Uniprot:P39937
Length = 518
Score = 221 (82.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 102/399 (25%), Positives = 180/399 (45%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGY-SGTWLGVDWD-YGNGKHDGSINGVRYFQAK 65
+Y++G R+ T+K++G ++ + S GV+WD + GKH G+I+ + YF +
Sbjct: 2 TYEIGDRLKIGG---YFCTIKFIGVIKPWPSVKAYGVEWDDHSRGKHSGTIDDIHYFDVQ 58
Query: 66 SQKSGSFVRVHNL-SPGISLPEALRVR-YRGESSKE--EEDEMYVLSASNKHVSIELVGK 121
SGSF++ + SPG+ R+ Y S K + + LS NK V E +G
Sbjct: 59 IPNSGSFLKESKIKSPGVR-----RITFYEALSEKYGGSSNNINDLSIGNKRV--EGLGF 111
Query: 122 DKIQDKFSKFEELTSAALPYLGVSSPGAN---IGTIV---TNLKELDLTGNLLSDWKDIG 175
D++ + +++L AL V+ N + ++ N+K+LDL+ NL ++ +
Sbjct: 112 DELNARNKNYKKLRKIALRDSDVAILFQNQDELNRVIQNCVNVKDLDLSLNLFTNINSLC 171
Query: 176 AFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEEL 235
F E L L LN+S N + L + I L + I K L + L
Sbjct: 172 EFIEPLKNLESLNISQNKLLSGWDNLKEYDLSHIKTLRLSSCGLSYKHIGK-LLKSFRTL 230
Query: 236 HLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLN 295
++ S + +T +Q F+N E C +LE+L ++ NNL
Sbjct: 231 KMLDLSYNNLTSAG---IQNFEN------EIPC--------------TLEELNISGNNLI 267
Query: 296 RI-YYPNNDTIHEL-VSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLD-SFPKLMD 352
+P N T+ L VS ++ + ++ L + +N ++ + ID L+ +FP L +
Sbjct: 268 SFPLFPKNLTLKGLNVSNNQISRAPSIAIYSVESLDITDNKFKERSLIDDLNKTFPSLKN 327
Query: 353 IRLSENPVSDPGRG-GISR----FAIIARLGKIKILNGS 386
I LS N + G + + ++AR ++ +LNGS
Sbjct: 328 IHLSGNEFNYNGNYINVEEQATFYEVLARFDRVMVLNGS 366
>MGI|MGI:1925543 [details] [associations]
symbol:Tbcel "tubulin folding cofactor E-like" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1925543
Prosite:PS00299 GO:GO:0005829 GO:GO:0005856 PROSITE:PS50053
eggNOG:NOG245706 Reactome:REACT_24972 GeneTree:ENSGT00530000063405
CTD:219899 HOGENOM:HOG000004866 HOVERGEN:HBG082881 OMA:GLHSWED
OrthoDB:EOG476K06 EMBL:AK052261 EMBL:AK077017 EMBL:BC139386
EMBL:BC139387 IPI:IPI00226110 IPI:IPI00226608 RefSeq:NP_766626.1
UniGene:Mm.34483 ProteinModelPortal:Q8C5W3 SMR:Q8C5W3
PhosphoSite:Q8C5W3 PaxDb:Q8C5W3 PRIDE:Q8C5W3
Ensembl:ENSMUST00000066148 Ensembl:ENSMUST00000066179
Ensembl:ENSMUST00000125995 Ensembl:ENSMUST00000128959
Ensembl:ENSMUST00000138506 GeneID:272589 KEGG:mmu:272589
UCSC:uc009paw.1 InParanoid:Q8C5W3 NextBio:393606 Bgee:Q8C5W3
CleanEx:MM_TBCEL Genevestigator:Q8C5W3
GermOnline:ENSMUSG00000037287 Uniprot:Q8C5W3
Length = 424
Score = 215 (80.7 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 76/249 (30%), Positives = 115/249 (46%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTG 200
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+N +S V
Sbjct: 59 GITCAGDEREIAAFCAHVSELDLSDNKLQDWHEVSKIVSNVPQLEFLNLSSNPLSLSVLE 118
Query: 201 LPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQ 260
S + + E + L L EL + +++ VS P V +L+
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHTILQELPELEELFLCLNDYETVSCPSVC-CHSLK 177
Query: 261 LLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESY 319
LL++ DN + +W+EI KL SL+ L L N+LN I P D++ L
Sbjct: 178 LLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPA-DSLARL----------- 225
Query: 320 LPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGK 379
F NL + L + ++ ID L+SFPKL ++RL P+ P R ++ARL
Sbjct: 226 --FPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVVARLPS 283
Query: 380 IKILNGSEV 388
+ LNGS V
Sbjct: 284 VSKLNGSVV 292
>UNIPROTKB|Q5QJ74 [details] [associations]
symbol:TBCEL "Tubulin-specific chaperone cofactor E-like
protein" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
Prosite:PS00299 GO:GO:0005737 EMBL:CH471065 GO:GO:0005856
InterPro:IPR019955 PROSITE:PS50053 eggNOG:NOG245706 EMBL:AY398644
EMBL:AK295673 EMBL:BC120988 IPI:IPI00166956 RefSeq:NP_001123519.1
RefSeq:NP_689928.3 UniGene:Hs.504136 ProteinModelPortal:Q5QJ74
SMR:Q5QJ74 STRING:Q5QJ74 PhosphoSite:Q5QJ74 DMDM:215273924
PRIDE:Q5QJ74 Ensembl:ENST00000422003 Ensembl:ENST00000529397
GeneID:219899 KEGG:hsa:219899 UCSC:uc001pxo.3 CTD:219899
GeneCards:GC11P120894 H-InvDB:HIX0010204 HGNC:HGNC:28115
HPA:HPA038593 MIM:610451 neXtProt:NX_Q5QJ74 PharmGKB:PA162405374
HOGENOM:HOG000004866 HOVERGEN:HBG082881 InParanoid:Q5QJ74
OMA:GLHSWED OrthoDB:EOG476K06 ChiTaRS:TBCEL GenomeRNAi:219899
NextBio:90838 ArrayExpress:Q5QJ74 Bgee:Q5QJ74 CleanEx:HS_TBCEL
Genevestigator:Q5QJ74 GermOnline:ENSG00000154114 Uniprot:Q5QJ74
Length = 424
Score = 212 (79.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 74/249 (29%), Positives = 116/249 (46%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTG 200
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+N ++ V
Sbjct: 59 GITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLE 118
Query: 201 LPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQ 260
S + + E + L L +L + +++ VS P + +L+
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLNDYETVSCPSIC-CHSLK 177
Query: 261 LLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESY 319
LL++ DN + +W+EI KL SL+ L L N+LN I P+ D++ L
Sbjct: 178 LLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPD-DSLARL----------- 225
Query: 320 LPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGK 379
F NL + L + ++ ID L+SFPKL ++RL P+ P R +IARL
Sbjct: 226 --FPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVIARLPS 283
Query: 380 IKILNGSEV 388
+ LNGS V
Sbjct: 284 VSKLNGSVV 292
>RGD|1308880 [details] [associations]
symbol:Tbcel "tubulin folding cofactor E-like" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] RGD:1308880
Prosite:PS00299 GO:GO:0005737 GO:GO:0005856 InterPro:IPR019955
PROSITE:PS50053 eggNOG:NOG245706 GeneTree:ENSGT00530000063405
CTD:219899 HOGENOM:HOG000004866 HOVERGEN:HBG082881
OrthoDB:EOG476K06 EMBL:BC087163 IPI:IPI00778732
RefSeq:NP_001014111.1 UniGene:Rn.214544 ProteinModelPortal:Q5PQJ7
Ensembl:ENSRNOT00000059951 GeneID:315591 KEGG:rno:315591
UCSC:RGD:1308880 InParanoid:Q5PQJ7 NextBio:669456
Genevestigator:Q5PQJ7 GermOnline:ENSRNOG00000032364 Uniprot:Q5PQJ7
Length = 424
Score = 212 (79.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 75/249 (30%), Positives = 115/249 (46%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTG 200
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+N +S V
Sbjct: 59 GITCAGDEREIAAFCAHVSELDLSDNKLQDWHEVSKIVSNVPQLEFLNLSSNPLSLSVLE 118
Query: 201 LPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQ 260
S + + E + L L +L + +++ VS P V +L+
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHTILQELPDLEELFLCLNDYETVSCPSVC-CHSLK 177
Query: 261 LLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESY 319
LL++ DN + EW+EI KL SL+ L L N++N I P D++ L
Sbjct: 178 LLHITDNNLQEWTEIRKLGVMFPSLDTLVLANNHVNAIEEPA-DSLARL----------- 225
Query: 320 LPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGK 379
F NL + L + ++ ID L+SFPKL ++RL P+ P R ++ARL
Sbjct: 226 --FPNLRSISLHKSGLQSWEDIDKLNSFPKLEEVRLLGIPLLQPYTTEERRKLVVARLPS 283
Query: 380 IKILNGSEV 388
+ LNGS V
Sbjct: 284 VSKLNGSVV 292
>ASPGD|ASPL0000026995 [details] [associations]
symbol:AN5531 species:162425 "Emericella nidulans"
[GO:0006457 "protein folding" evidence=IEA] [GO:0007021 "tubulin
complex assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] InterPro:IPR000938 Pfam:PF01302
EMBL:BN001305 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 OrthoDB:EOG4WWVTT
EMBL:AACD01000094 RefSeq:XP_663135.1 ProteinModelPortal:Q5B1P9
EnsemblFungi:CADANIAT00003551 GeneID:2871821 KEGG:ani:AN5531.2
HOGENOM:HOG000191667 Uniprot:Q5B1P9
Length = 606
Score = 215 (80.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 103/359 (28%), Positives = 163/359 (45%)
Query: 26 TVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQA--KSQKSGSFVRVHNL--SP 80
T++YVG+V G SG WLGV+WD GKH G NGVRYF+ +GSFVR SP
Sbjct: 26 TIRYVGKVDGTSGEWLGVEWDDPTRGKHSGQHNGVRYFRCLRNHPTAGSFVRPSRPADSP 85
Query: 81 GISLPEALRVRYRG--ESSKEEE---DEMYVLSASNKHVSIELVGKDKIQDKFSKFEELT 135
S EA+R +Y E S+E + D + K E VG DKI+ + ++ EEL
Sbjct: 86 R-SFLEAVREKYASDFEQSRERQARPDAEFEEPIRFKSKIAEEVGFDKIRKQLAELEELK 144
Query: 136 SAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMS 195
L G V L + + + + + G P + L+LS N+++
Sbjct: 145 IVLLD-----------GLRVAGLLAQEASREQVEEAR--GQIERTCPKIVELDLSWNMLT 191
Query: 196 K--EVTGLPQ-LKSIRILVLNCT-------GVNWMQV-EI-LKHSLPALEELHLMGNSIS 243
K +V+ + + L+ + +L LN G+ + + E+ L +L E++ +
Sbjct: 192 KWRDVSDICRPLRRLSLLKLNGNRFEPVEEGLRFDGIKELHLDDTLLPWEQISRVAAQFP 251
Query: 244 EITPVSSPIVQ-GFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN 302
+T +S+ Q + N I + +EI L IR+L L NL + N
Sbjct: 252 SLTWLSASANQISMVRTPISNTIITLILDNNEIGSLSSIRALTSL----QNLEHLSLRGN 307
Query: 303 DTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSL-DSFPKLMDIRLSENPV 360
+ V+A E+ S+ ++L + L N I I+ L + FP L +R+S NP+
Sbjct: 308 CI--DAVAAAETEGHSFQFSRSLRSVDLSRNKINSWLFINQLPEIFPGLRSLRVSGNPL 364
>CGD|CAL0005987 [details] [associations]
symbol:orf19.2921 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0007021 "tubulin
complex assembly" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000938
PROSITE:PS51450 CGD:CAL0005987 Pfam:PF01302 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 eggNOG:NOG245706
InterPro:IPR025875 Pfam:PF12799 EMBL:AACQ01000084
RefSeq:XP_715575.1 ProteinModelPortal:Q5A198 STRING:Q5A198
GeneID:3642819 KEGG:cal:CaO19.2921 Uniprot:Q5A198
Length = 502
Score = 209 (78.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 78/301 (25%), Positives = 140/301 (46%)
Query: 9 YKLGQRVHSANDARRIGTVKYVGE--VQGYSGTWLGVDWDY-GNGKHDGSINGVRYFQAK 65
Y L RV + ++ +GT++Y+G V G + LG++WD GK++G +NG++YF K
Sbjct: 5 YSLNDRVSTIDNY--LGTIRYIGNLPVWGTNTVALGIEWDDPSRGKNNGDLNGIQYFTPK 62
Query: 66 SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQ 125
SG+F++ N S +++ + E+ + E + + K ++E +G DK+
Sbjct: 63 VTGSGTFIKSSNRSLNHIRKSFVQIIH--ENYLDTEYKTKNIQFGIK--TVEELGWDKLN 118
Query: 126 DKFSKFEELTSAALPYLGVS-----SPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQ 180
S L S L Y ++ + + + NL L+L+ NL +D +I +
Sbjct: 119 KFHSNLRNLDSLTLDYCLINIAYHDNEDKQLFDELVNLTNLELSCNLFTDVNEICKIIDN 178
Query: 181 LPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGN 240
+P+L LN++ N S+ I L L+ T ++ +E L P L+EL++ GN
Sbjct: 179 IPSLTSLNINGNRFSQFSQEQRTHNGIVSLKLSSTMMSTSMLEKLIKKFPNLKELYISGN 238
Query: 241 SISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYP 300
+ + + L +L+L N + E IL L +L YL+ + + P
Sbjct: 239 NYCNADIENMNLNMP---LTILDLSYNRL-EHMPILPLVSALNLSHNYLSLQIIKGTF-P 293
Query: 301 N 301
N
Sbjct: 294 N 294
>ZFIN|ZDB-GENE-040426-1719 [details] [associations]
symbol:tbcela "tubulin folding cofactor E-like a"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000626 SMART:SM00213
ZFIN:ZDB-GENE-040426-1719 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00530000063405
EMBL:BX548078 IPI:IPI00851429 Ensembl:ENSDART00000124092
Ensembl:ENSDART00000135770 Uniprot:F1QNT3
Length = 448
Score = 188 (71.2 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 68/249 (27%), Positives = 110/249 (44%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTG 200
G+S G I ++ ELDL+ N L DW +I +P L LNLS+N +S V
Sbjct: 83 GISHAGDQGEIAAFCAHVVELDLSHNKLQDWHEISKIVSNVPNLEFLNLSSNQLSDAVLD 142
Query: 201 LPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQ 260
K+ + + + + + EL + ++E T V+ + L+
Sbjct: 143 PDCAKAFSSIRRFVLNNTQVSWDTVHTFTQEMPELEELFLCLNEYTTVTLAAMP-CPTLR 201
Query: 261 LLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESY 319
LL++ DN + EW+E+ K+ +L+ L + NNLN I + + +H L
Sbjct: 202 LLHITDNNLHEWNEVRKIGSMFPALDTLVMANNNLNSIQ-ESGEILHRL----------- 249
Query: 320 LPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGK 379
F NL + L N+ + I+ L PKL ++RL P+ R +IA+L
Sbjct: 250 --FPNLRSINLHNSGLNRWEDIEKLTFLPKLEEVRLQGIPLLQTYTSTERRSLMIAQLPS 307
Query: 380 IKILNGSEV 388
+ LNGS V
Sbjct: 308 VTSLNGSVV 316
Score = 130 (50.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 53/229 (23%), Positives = 108/229 (47%)
Query: 82 ISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIEL-VGKDKIQDKFSKFEELTSAA-- 138
++LP L + G S ++ E+ A HV +EL + +K+QD + + ++ S
Sbjct: 71 LNLPSVLVLNGCGISHAGDQGEIAAFCA---HV-VELDLSHNKLQD-WHEISKIVSNVPN 125
Query: 139 LPYLGVSSPGANIGTI-------VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLS- 190
L +L +SS + + ++++ L +S W + F +++P L L L
Sbjct: 126 LEFLNLSSNQLSDAVLDPDCAKAFSSIRRFVLNNTQVS-WDTVHTFTQEMPELEELFLCL 184
Query: 191 NNLMSKEVTGLPQLKSIRILVLNCTGVN-WMQVEILKHSLPALEELHLMGNSISEITPVS 249
N + + +P ++R+L + ++ W +V + PAL+ L + N+++ I
Sbjct: 185 NEYTTVTLAAMP-CPTLRLLHITDNNLHEWNEVRKIGSMFPALDTLVMANNNLNSIQESG 243
Query: 250 SPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIY 298
+ + F NL+ +NL ++ + W +I KL + LE++ L L + Y
Sbjct: 244 EILHRLFPNLRSINLHNSGLNRWEDIEKLTFLPKLEEVRLQGIPLLQTY 292
>UNIPROTKB|F1RGX1 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0014889 "muscle atrophy" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0007023 "post-chaperonin
tubulin folding pathway" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0000226 GO:GO:0008344 GO:GO:0009791
GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:CU468332
Ensembl:ENSSSCT00000011118 OMA:KLPSILY Uniprot:F1RGX1
Length = 102
Score = 158 (60.7 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 38 GTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGISLPEALRVRYRGES 96
G WLGV+WD GKHDGS G YF+ + GSF+R + ++ G+ A++ RY E
Sbjct: 12 GLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPNKVNFGVDFLTAIKNRYVLED 71
Query: 97 SKEEEDEMYVLSASNKHVSIELVGKDKI 124
EEE++ + NK V E +G D +
Sbjct: 72 EPEEEEKEQTVIIGNKPV--ETIGFDSV 97
>MGI|MGI:1920564 [details] [associations]
symbol:Lrrc69 "leucine rich repeat containing 69"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1920564 eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 HSSP:P21793 EMBL:AK006601
EMBL:AK161371 EMBL:AL772236 IPI:IPI00113010 RefSeq:NP_082775.1
UniGene:Mm.52613 ProteinModelPortal:Q9D9Q0 SMR:Q9D9Q0
PhosphoSite:Q9D9Q0 PRIDE:Q9D9Q0 Ensembl:ENSMUST00000023917
Ensembl:ENSMUST00000108276 GeneID:73314 KEGG:mmu:73314
UCSC:uc008sba.1 CTD:100130742 GeneTree:ENSGT00700000104535
HOGENOM:HOG000007755 HOVERGEN:HBG108103 InParanoid:Q9D9Q0
OMA:NTWLECV OrthoDB:EOG447FVC NextBio:337931 Bgee:Q9D9Q0
Genevestigator:Q9D9Q0 Uniprot:Q9D9Q0
Length = 347
Score = 170 (64.9 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 68/207 (32%), Positives = 105/207 (50%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
N K L L G ++ + + E+LP L L+L NN +SK P+L+++ L L G
Sbjct: 15 NTKILTLNGKRITK---MPSTLEKLPNLKTLDLQNNSISKVC---PELRTLTQLTLLNLG 68
Query: 217 VNWMQV--EILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
N +Q E +K+ L +L+ LHL GN I I P + G L +LNL DN + +
Sbjct: 69 NNHLQEVPEEIKY-LTSLKNLHLFGNRICRIAP---GVFNGLHRLIMLNLNDNRLTSLPQ 124
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIYYPNN-DTIHELVSAHESHEES-YLP-----FQNLCC 327
++ ++RSL L LN+NNL I P ++ L H ++ + Y+P +NL
Sbjct: 125 --EIGRLRSLTYLSLNRNNLTVI--PKELCSLEHLSELHLNYNQIVYIPEEIKFLKNLQQ 180
Query: 328 LLLGNNMIEDLAS-IDSLDSFPKLMDI 353
L L N IE+L I L+ +++DI
Sbjct: 181 LFLVRNNIEELPEEICHLEKL-RVLDI 206
>ZFIN|ZDB-GENE-030131-9296 [details] [associations]
symbol:tbcb "tubulin folding cofactor B"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-030131-9296
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 CTD:1155 HOVERGEN:HBG003239 HSSP:Q20728
EMBL:BC044438 IPI:IPI00481671 RefSeq:NP_997940.1 UniGene:Dr.860
ProteinModelPortal:Q803K6 SMR:Q803K6 STRING:Q803K6 PRIDE:Q803K6
GeneID:337350 KEGG:dre:337350 InParanoid:Q803K6 NextBio:20812190
ArrayExpress:Q803K6 Bgee:Q803K6 Uniprot:Q803K6
Length = 246
Score = 150 (57.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 7 ESYKLGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQA 64
E+ +G R V A +IGTV YVG G W+GV +D GKHDGS+NG RYF+
Sbjct: 159 EAIAVGNRCKVQVPGQATKIGTVMYVGTADFKPGYWVGVKYDEPLGKHDGSVNGKRYFEC 218
Query: 65 KSQKSGSFVRVHNLSPGISLPE 86
+ K G+FV+ ++ G PE
Sbjct: 219 EP-KYGAFVKPLTVTVG-DFPE 238
>MGI|MGI:3045299 [details] [associations]
symbol:Lrrd1 "leucine rich repeats and death domain
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50017 PROSITE:PS51450
MGI:MGI:3045299 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 HSSP:P25147 UniGene:Mm.482273
GeneTree:ENSGT00700000104287 CTD:401387 HOVERGEN:HBG108705
OrthoDB:EOG4K6G5V EMBL:AK029981 EMBL:BC141026 EMBL:BC145170
IPI:IPI00223958 RefSeq:NP_766467.2 ProteinModelPortal:Q8C0R9
SMR:Q8C0R9 PhosphoSite:Q8C0R9 PRIDE:Q8C0R9
Ensembl:ENSMUST00000044039 GeneID:242838 KEGG:mmu:242838
HOGENOM:HOG000060227 InParanoid:B2RU96 OMA:HTIACYL NextBio:385582
Bgee:Q8C0R9 CleanEx:MM_4932412H11RIK Genevestigator:Q8C0R9
Uniprot:Q8C0R9
Length = 853
Score = 155 (59.6 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 64/231 (27%), Positives = 115/231 (49%)
Query: 86 EALRVRYRGESSKEEEDEMY----VLSASNKHVSI---ELVGKDKIQDKF---SKFEELT 135
E L ++ G SS E +++ +L+AS +S EL+ + ++ + + L
Sbjct: 185 EILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLP 244
Query: 136 SAA--LPYLGVSSPGANIGTIV----TNLKELDLTGNLLSDWKDIGAFGEQL---PALAV 186
S L YL S G N+ T + ++LK L + NL ++ + F + L P L
Sbjct: 245 SGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRIL-NL--EYNQLTIFSKSLCFLPKLNS 301
Query: 187 LNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEIT 246
LNL+ N++ + +LK++ L+++ + ++ VEI + LP ++ELHL N + I
Sbjct: 302 LNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQ--LPKIKELHLADNKLEAI- 358
Query: 247 PVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI 297
SP ++ F L+LLNL+ N + + + C +LE L L+ NN+ +
Sbjct: 359 ---SPKIENFKELRLLNLDKNLLQSIPKKISHCV--NLESLSLSDNNIEEL 404
>UNIPROTKB|P25147 [details] [associations]
symbol:inlB "Internalin B" species:169963 "Listeria
monocytogenes EGD-e" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
GenomeReviews:AL591824_GR Gene3D:2.60.40.1220 InterPro:IPR014755
InterPro:IPR013378 InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191
TIGRFAMs:TIGR02543 EMBL:M67471 EMBL:AJ012346 EMBL:AL591975
PIR:AC1129 PIR:C39930 RefSeq:NP_463963.1 PDB:1D0B PDB:1H6T PDB:1M9S
PDB:1OTM PDB:1OTN PDB:1OTO PDB:2UZX PDB:2UZY PDB:2WQU PDB:2WQV
PDB:2WQW PDB:2WQX PDB:2Y5P PDB:2Y5Q PDB:4AW4 PDBsum:1D0B
PDBsum:1H6T PDBsum:1M9S PDBsum:1OTM PDBsum:1OTN PDBsum:1OTO
PDBsum:2UZX PDBsum:2UZY PDBsum:2WQU PDBsum:2WQV PDBsum:2WQW
PDBsum:2WQX PDBsum:2Y5P PDBsum:2Y5Q PDBsum:4AW4
ProteinModelPortal:P25147 SMR:P25147 IntAct:P25147 GeneID:986892
KEGG:lmo:lmo0434 PATRIC:20309923 GenoList:LMO0434 KO:K13731
OMA:KYCLISG ProtClustDB:CLSK2393592 EvolutionaryTrace:P25147
InterPro:IPR025987 Pfam:PF13457 Uniprot:P25147
Length = 630
Score = 148 (57.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 49/139 (35%), Positives = 75/139 (53%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
N+ +L L GN L+D K + L L L L N + K+++ L LK ++ L L G
Sbjct: 99 NVTKLFLNGNKLTDIKPLA----NLKNLGWLFLDENKV-KDLSSLKDLKKLKSLSLEHNG 153
Query: 217 VNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEIL 276
++ + L H LP LE L+L N I++IT +S L L+LEDN I S+I+
Sbjct: 154 IS--DINGLVH-LPQLESLYLGNNKITDITVLSR-----LTKLDTLSLEDNQI---SDIV 202
Query: 277 KLCQIRSLEQLYLNKNNLN 295
L + L+ LYL+KN+++
Sbjct: 203 PLAGLTKLQNLYLSKNHIS 221
>UNIPROTKB|Q99426 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=TAS] [GO:0051084 "'de novo'
posttranslational protein folding" evidence=TAS] [GO:0044267
"cellular protein metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 GO:GO:0015630
GO:GO:0051084 eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 EMBL:AD001527 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AF013488 EMBL:BT007424
EMBL:BC005969 EMBL:BC052812 EMBL:D49738 IPI:IPI00293126
RefSeq:NP_001272.2 UniGene:Hs.31053 ProteinModelPortal:Q99426
SMR:Q99426 IntAct:Q99426 MINT:MINT-2855745 STRING:Q99426
PhosphoSite:Q99426 DMDM:3023518 OGP:Q99426 PaxDb:Q99426
PeptideAtlas:Q99426 PRIDE:Q99426 DNASU:1155 Ensembl:ENST00000221855
GeneID:1155 KEGG:hsa:1155 UCSC:uc002odg.1 GeneCards:GC19P036605
HGNC:HGNC:1989 HPA:HPA041428 HPA:HPA041722 MIM:601303
neXtProt:NX_Q99426 PharmGKB:PA162405357 InParanoid:Q99426
PhylomeDB:Q99426 ChiTaRS:TBCB GenomeRNAi:1155 NextBio:4796
ArrayExpress:Q99426 Bgee:Q99426 CleanEx:HS_TBCB
Genevestigator:Q99426 GermOnline:ENSG00000105254 Uniprot:Q99426
Length = 244
Score = 139 (54.0 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 8 SYKLGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAK 65
S +G R V +A + R GTV YVG G W+GV +D GK+DGS+NG RYF+ +
Sbjct: 158 SIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQ 217
Query: 66 SQKSGSFVRVHNLSPGISLPE 86
+ K G+FV+ ++ G PE
Sbjct: 218 A-KYGAFVKPAVVTVG-DFPE 236
>DICTYBASE|DDB_G0277983 [details] [associations]
symbol:tbcB "tubulin folding cofactor B"
species:44689 "Dictyostelium discoideum" [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000938 dictyBase:DDB_G0277983
Pfam:PF01302 GO:GO:0005737 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
OMA:GKHDGMV RefSeq:XP_642051.1 HSSP:Q20728
ProteinModelPortal:Q54Z01 EnsemblProtists:DDB0266632 GeneID:8621263
KEGG:ddi:DDB_G0277983 Uniprot:Q54Z01
Length = 270
Score = 140 (54.3 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 19 NDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNL 78
N R+G V+YVG V+ SG W+GV+ D GK+DGS+ G +YFQ S K G F + N+
Sbjct: 202 NYDERLGKVQYVGTVEFSSGVWIGVELDLPLGKNDGSVKGKQYFQC-SPKYGCFAKPKNV 260
Query: 79 SPGISLPE 86
G PE
Sbjct: 261 LVG-DYPE 267
>UNIPROTKB|Q723V1 [details] [associations]
symbol:LMOf2365_0374 "Internalin" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012983.1 ProteinModelPortal:Q723V1
STRING:Q723V1 GeneID:2797573 KEGG:lmf:LMOf2365_0374 PATRIC:20321953
OMA:QINNLQG ProtClustDB:CLSK225039 Uniprot:Q723V1
Length = 589
Score = 146 (56.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 68/235 (28%), Positives = 115/235 (48%)
Query: 132 EELTSAALPYLGVSS-PGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLS 190
+ + S L G+SS G N +TNL L LTGN +SD + + L L +L LS
Sbjct: 71 DTINSLTLTSKGISSLEGMNY---LTNLGTLILTGNQVSDISPL----KGLTNLTMLQLS 123
Query: 191 NNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSS 250
N +S +++ L LK+++ L +N V + L L L+ L L N + ++ V+S
Sbjct: 124 GNPIS-DISALSNLKNLQALDINDAQVT--DITPLS-GLTNLKGLGLYNNQLENLSGVNS 179
Query: 251 PIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN-DTIHEL- 308
L+ LN+ +N + E+ L +L LY N+N +N + +N + + L
Sbjct: 180 -----LHQLRSLNVSNNKLTNLDELQALS---NLSVLYANENQINNLQGLSNLNNLFLLD 231
Query: 309 VSAHESHEESYLP-FQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSD 362
+SA++ + + L + L + NN I D+ + SL + L DI S+N +S+
Sbjct: 232 LSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGLSSLINLDWL-DI--SQNKISN 283
>DICTYBASE|DDB_G0268578 [details] [associations]
symbol:gefV "leucine-rich repeat-containing protein
(LRR)" species:44689 "Dictyostelium discoideum" [GO:0030587
"sorocarp development" evidence=IMP] [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0017048 "Rho GTPase binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR008937 InterPro:IPR010473
InterPro:IPR016024 InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618
Pfam:PF06371 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50212
PROSITE:PS51450 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0268578
GO:GO:0016021 GO:GO:0007264 GenomeReviews:CM000150_GR
SUPFAM:SSF48371 GO:GO:0030036 eggNOG:COG4886 GO:GO:0051056
EMBL:AAFI02000003 GO:GO:0030587 GO:GO:0005622 GO:GO:0005085
InterPro:IPR025875 Pfam:PF12799 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 InterPro:IPR014768
PROSITE:PS51232 PANTHER:PTHR23113 HSSP:Q07889 RefSeq:XP_647595.1
ProteinModelPortal:Q55FD8 STRING:Q55FD8 EnsemblProtists:DDB0231998
GeneID:8616407 KEGG:ddi:DDB_G0268578 InParanoid:Q55FD8 OMA:RIDSISC
Uniprot:Q55FD8
Length = 1982
Score = 152 (58.6 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 76/255 (29%), Positives = 127/255 (49%)
Query: 151 IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRIL 210
IG +T LK LDL+GN ++ + +F L +L LNL +N + L L + L
Sbjct: 184 IGDQLTTLKSLDLSGNTITSLPN--SFSN-LVSLTSLNLKSNKFTCFPPSLCTLDKLVHL 240
Query: 211 VLNCTGVNWMQVEILKHSL-----PALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLE 265
L+C N + V H+L P+LE+L L N + P+ I++ +L++L L+
Sbjct: 241 NLSC---NQILVSPSDHTLGVSLLPSLEKLELQHNRFAHF-PMD--ILE-IVSLRVLKLQ 293
Query: 266 DNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEE----SYLP 321
DN I + + K+ + +L +L+L++N + ++ P+ TI EL++ + + E LP
Sbjct: 294 DNDIDKIPD--KIGNLLNLNELFLSENKITQL--PS--TIGELINLRKLYLEYNKIGSLP 347
Query: 322 --FQNLC---CLLLGNNMIEDLASI-DSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIA 375
F L L+L NN DL + D L S +L+ + L EN +S + I +A
Sbjct: 348 QEFSKLSKLNILILHNN---DLKFVPDQLHSLSQLLRLSLDENQLSSSDQKLIKSEGSLA 404
Query: 376 RLGKIKILN-GSEVN 389
+ + LN GS +N
Sbjct: 405 LIKRKNKLNYGSTMN 419
>MGI|MGI:2674939 [details] [associations]
symbol:Podn "podocan" species:10090 "Mus musculus"
[GO:0005518 "collagen binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0030336 "negative regulation of cell migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2674939 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0030336 InterPro:IPR000372 SMART:SM00013 EMBL:AL611936
EMBL:CH466527 GeneTree:ENSGT00600000084286 HSSP:P07359 CTD:127435
HOVERGEN:HBG059195 OMA:SGNRLHT OrthoDB:EOG42V8FX EMBL:AY313606
EMBL:AK034987 EMBL:BC094340 IPI:IPI00222916 IPI:IPI00807737
RefSeq:NP_766462.2 UniGene:Mm.74710 ProteinModelPortal:Q7TQ62
SMR:Q7TQ62 PhosphoSite:Q7TQ62 PRIDE:Q7TQ62
Ensembl:ENSMUST00000044248 Ensembl:ENSMUST00000106708
Ensembl:ENSMUST00000106709 GeneID:242608 KEGG:mmu:242608
UCSC:uc008uaq.1 UCSC:uc012did.1 HOGENOM:HOG000231119
InParanoid:A2A8F3 NextBio:385450 Bgee:Q7TQ62 CleanEx:MM_PODN
Genevestigator:Q7TQ62 GermOnline:ENSMUSG00000028600 Uniprot:Q7TQ62
Length = 611
Score = 144 (55.7 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 68/219 (31%), Positives = 110/219 (50%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LTS L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 143 FEHLTS--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 197
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 198 YLHNNKLAD--AGLPDHMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 251
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 252 EKIPPGA---FSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 308
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNNMIE 336
P + + H +A +S E L P +NL LLL +N ++
Sbjct: 309 PRSLVLLHLEKNAIQSVEADVLTPIRNLEYLLLHSNQLQ 347
>UNIPROTKB|Q15435 [details] [associations]
symbol:PPP1R7 "Protein phosphatase 1 regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030234 "enzyme
regulator activity" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0008599 "protein phosphatase type 1 regulator
activity" evidence=TAS] [GO:0050790 "regulation of catalytic
activity" evidence=NAS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005634 GO:GO:0005737 EMBL:CH471063 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GO:GO:0008599 CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161
OMA:PQYRRKI OrthoDB:EOG4894MX EMBL:Z50749 EMBL:AF067136
EMBL:AF067130 EMBL:AF067132 EMBL:AF067133 EMBL:AF067134
EMBL:AF067135 EMBL:AF067131 EMBL:BT007296 EMBL:BT020134
EMBL:AK294043 EMBL:BC000910 EMBL:BC012397 EMBL:BC013001
IPI:IPI00033600 IPI:IPI00395771 IPI:IPI00759705 IPI:IPI00759816
PIR:S68209 RefSeq:NP_002703.1 UniGene:Hs.36587
ProteinModelPortal:Q15435 SMR:Q15435 DIP:DIP-1005N IntAct:Q15435
STRING:Q15435 PhosphoSite:Q15435 DMDM:74762145
REPRODUCTION-2DPAGE:IPI00033600 PaxDb:Q15435 PRIDE:Q15435
DNASU:5510 Ensembl:ENST00000234038 Ensembl:ENST00000272983
Ensembl:ENST00000401987 Ensembl:ENST00000406106
Ensembl:ENST00000407025 GeneID:5510 KEGG:hsa:5510 UCSC:uc002was.3
UCSC:uc002wat.1 UCSC:uc002wau.1 GeneCards:GC02P242088
HGNC:HGNC:9295 HPA:HPA034501 MIM:602877 neXtProt:NX_Q15435
PharmGKB:PA33658 InParanoid:Q15435 PhylomeDB:Q15435 ChiTaRS:PPP1R7
GenomeRNAi:5510 NextBio:21312 ArrayExpress:Q15435 Bgee:Q15435
CleanEx:HS_PPP1R7 Genevestigator:Q15435 GermOnline:ENSG00000115685
Uniprot:Q15435
Length = 360
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 124 IQDKFSKFEELTSA-ALPYLGVSSPGA----NIGTIVTNLKELDLTGNLLSDWKDIGAFG 178
+ +K SK E L++ L L + S NI T+ TNL+ L L N ++ +++ A
Sbjct: 172 VNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTL-TNLESLFLGKNKITKLQNLDA-- 228
Query: 179 EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L VL++ +N ++K + GL L ++R L L+ G+ +E L+++ L L +
Sbjct: 229 --LTNLTVLSMQSNRLTK-IEGLQNLVNLRELYLSHNGIE--VIEGLENN-NKLTMLDIA 282
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
N I +I +S LQ + DN + WS++ +L RSLE +YL +N L +
Sbjct: 283 SNRIKKIENISH-----LTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 335
Score = 125 (49.1 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 54/213 (25%), Positives = 101/213 (47%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
+T L+ LD++ NLL + + + ++L L L L NN +SK + L L +++L L
Sbjct: 141 LTELEILDISFNLLRNIEGV----DKLTRLKKLFLVNNKISK-IENLSNLHQLQMLELGS 195
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ +E + +L LE L L N I+++ + + NL +L+++ N + +
Sbjct: 196 NRIR--AIENID-TLTNLESLFLGKNKITKLQNLDA-----LTNLTVLSMQSNRLTKIEG 247
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIY-YPNND--TIHELVSAHESHEESYLPFQNLCCLLLG 331
+ L +R +LYL+ N + I NN+ T+ ++ S E+ L +
Sbjct: 248 LQNLVNLR---ELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMN 304
Query: 332 NNMIEDLASIDSLDSFPKLMDIRLSENPVS-DP 363
+N++E + +D L L + L NP+ DP
Sbjct: 305 DNLLESWSDLDELKGARSLETVYLERNPLQKDP 337
>UNIPROTKB|E1BAL0 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0045121 "membrane raft" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0090004 "positive regulation of establishment of protein
localization to plasma membrane" evidence=ISS] [GO:0045444 "fat
cell differentiation" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0072321
"chaperone-mediated protein transport" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0045807 "positive
regulation of endocytosis" evidence=ISS] [GO:0044091 "membrane
biogenesis" evidence=ISS] [GO:0031115 "negative regulation of
microtubule polymerization" evidence=ISS] InterPro:IPR002110
InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248 Pfam:PF01302
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:DAAA02046954 IPI:IPI00686311 RefSeq:NP_001192827.1
UniGene:Bt.56647 PRIDE:E1BAL0 Ensembl:ENSBTAT00000026221
GeneID:522965 KEGG:bta:522965 NextBio:20873637 Uniprot:E1BAL0
Length = 547
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKISKAVDAP 367
>UNIPROTKB|Q96DZ5 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9606 "Homo sapiens" [GO:0005795 "Golgi stack" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IMP;IDA]
[GO:0005886 "plasma membrane" evidence=IDA;IMP] [GO:0008017
"microtubule binding" evidence=IMP;IDA] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=IMP] [GO:0035594
"ganglioside binding" evidence=IDA] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0055038 "recycling endosome
membrane" evidence=IDA] [GO:0044091 "membrane biogenesis"
evidence=IMP] [GO:0045121 "membrane raft" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=IMP] [GO:0072321 "chaperone-mediated protein transport"
evidence=IMP] [GO:0005802 "trans-Golgi network" evidence=ISS]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
Pfam:PF01302 GO:GO:0005886 GO:GO:0031901 GO:GO:0032588
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 EMBL:AJ427922 EMBL:AK094738
EMBL:AK289509 EMBL:BC013116 EMBL:BC014486 EMBL:AL117468
IPI:IPI00103362 PIR:T17253 RefSeq:NP_001186499.1 RefSeq:NP_056341.1
UniGene:Hs.466539 PDB:2CP0 PDBsum:2CP0 ProteinModelPortal:Q96DZ5
SMR:Q96DZ5 STRING:Q96DZ5 PhosphoSite:Q96DZ5 DMDM:116241302
PaxDb:Q96DZ5 PRIDE:Q96DZ5 Ensembl:ENST00000360535 GeneID:25999
KEGG:hsa:25999 UCSC:uc002ocz.2 CTD:25999 GeneCards:GC19M036505
H-InvDB:HIX0040341 HGNC:HGNC:24314 HPA:HPA041429 MIM:607382
neXtProt:NX_Q96DZ5 PharmGKB:PA162382439 HOGENOM:HOG000007206
HOVERGEN:HBG057079 InParanoid:Q96DZ5 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ PhylomeDB:Q96DZ5 EvolutionaryTrace:Q96DZ5
GenomeRNAi:25999 NextBio:47718 ArrayExpress:Q96DZ5 Bgee:Q96DZ5
CleanEx:HS_CLIP3 Genevestigator:Q96DZ5 GermOnline:ENSG00000105270
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
Uniprot:Q96DZ5
Length = 547
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKISKAVDAP 367
>UNIPROTKB|Q5R686 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9601 "Pongo abelii" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005802 "trans-Golgi
network" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0031115 "negative regulation of microtubule polymerization"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0044091 "membrane biogenesis" evidence=ISS] [GO:0045121
"membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0008017
GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 CTD:25999 HOVERGEN:HBG057079 KO:K10423
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CR860608 RefSeq:NP_001126592.1 UniGene:Pab.1232
ProteinModelPortal:Q5R686 SMR:Q5R686 GeneID:100173588
KEGG:pon:100173588 InParanoid:Q5R686 Uniprot:Q5R686
Length = 547
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKISKAVDAP 367
>MGI|MGI:1923936 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0010828 "positive regulation of glucose transport"
evidence=IMP] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISO] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISO] [GO:0031901 "early endosome membrane"
evidence=ISO] [GO:0032588 "trans-Golgi network membrane"
evidence=ISO] [GO:0035594 "ganglioside binding" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0044091 "membrane biogenesis" evidence=ISO]
[GO:0045121 "membrane raft" evidence=ISO] [GO:0045807 "positive
regulation of endocytosis" evidence=ISO] [GO:0055038 "recycling
endosome membrane" evidence=ISO] [GO:0072321 "chaperone-mediated
protein transport" evidence=ISO] [GO:0090004 "positive regulation
of establishment of protein localization to plasma membrane"
evidence=IDA] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 MGI:MGI:1923936 Pfam:PF01302 GO:GO:0005886
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
EMBL:CH466593 GeneTree:ENSGT00700000104055 CTD:25999
HOGENOM:HOG000007206 HOVERGEN:HBG057079 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 EMBL:AC149067 EMBL:BC056173 EMBL:BC138413
EMBL:AK005167 IPI:IPI00265407 RefSeq:NP_001074583.1
UniGene:Mm.159258 PDB:1WHH PDBsum:1WHH ProteinModelPortal:B9EHT4
SMR:B9EHT4 PRIDE:B9EHT4 Ensembl:ENSMUST00000014065 GeneID:76686
KEGG:mmu:76686 UCSC:uc009gea.1 ChiTaRS:CLIP3
EvolutionaryTrace:Q9DB67 NextBio:345627 Bgee:B9EHT4
Genevestigator:B9EHT4 Uniprot:B9EHT4
Length = 547
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKVSKAVDAP 367
>RGD|1306245 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10116 "Rattus norvegicus" [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISO;ISS] [GO:0005802
"trans-Golgi network" evidence=ISO;ISS] [GO:0005886 "plasma
membrane" evidence=ISO;ISS] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0010828 "positive regulation of glucose
transport" evidence=ISO;ISS] [GO:0018230 "peptidyl-L-cysteine
S-palmitoylation" evidence=ISO;ISS] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=ISO;ISS]
[GO:0031901 "early endosome membrane" evidence=ISO;ISS] [GO:0032588
"trans-Golgi network membrane" evidence=ISO;ISS] [GO:0035594
"ganglioside binding" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0044091
"membrane biogenesis" evidence=ISO;ISS] [GO:0045121 "membrane raft"
evidence=ISO;ISS] [GO:0045444 "fat cell differentiation"
evidence=ISS] [GO:0045807 "positive regulation of endocytosis"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISO;ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISO;ISS] InterPro:IPR002110 InterPro:IPR000938
PROSITE:PS50088 SMART:SM00248 Pfam:PF01302 RGD:1306245
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038 EMBL:CH473979
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 IPI:IPI00367085 RefSeq:NP_001100971.1
RefSeq:XP_003748868.1 UniGene:Rn.136605 SMR:D4A507
Ensembl:ENSRNOT00000028247 GeneID:100911911 GeneID:308493
KEGG:rno:100911911 KEGG:rno:308493 UCSC:RGD:1306245 NextBio:659004
Uniprot:D4A507
Length = 547
Score = 140 (54.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKVSKAVDAP 367
>MGI|MGI:1913661 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR000938 MGI:MGI:1913661 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 eggNOG:COG5244
HOGENOM:HOG000209180 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AK002316 EMBL:AK003655
EMBL:AK010438 EMBL:BC010684 IPI:IPI00315948 RefSeq:NP_079824.2
UniGene:Mm.27947 PDB:1V6E PDB:1WHG PDBsum:1V6E PDBsum:1WHG
ProteinModelPortal:Q9D1E6 SMR:Q9D1E6 STRING:Q9D1E6
PhosphoSite:Q9D1E6 PaxDb:Q9D1E6 PRIDE:Q9D1E6
Ensembl:ENSMUST00000006254 GeneID:66411 KEGG:mmu:66411
UCSC:uc009gds.2 InParanoid:Q9D1E6 EvolutionaryTrace:Q9D1E6
NextBio:321613 Bgee:Q9D1E6 CleanEx:MM_TBCB Genevestigator:Q9D1E6
GermOnline:ENSMUSG00000006095 Uniprot:Q9D1E6
Length = 244
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 11 LGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
+G R V + + + R GTV YVG G W+GV +D GK+DGS+NG RYF+ ++ K
Sbjct: 161 VGSRCEVRAPDHSLRRGTVMYVGLTDFKPGYWVGVRYDEPLGKNDGSVNGKRYFECQA-K 219
Query: 69 SGSFVRVHNLSPGISLPE 86
G+FV+ ++ G PE
Sbjct: 220 YGAFVKPSAVTVG-DFPE 236
>RGD|1308169 [details] [associations]
symbol:Ppp1r7 "protein phosphatase 1, regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 RGD:1308169
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161 OMA:PQYRRKI
OrthoDB:EOG4894MX EMBL:BC088868 IPI:IPI00358083
RefSeq:NP_001009825.1 UniGene:Rn.19437 ProteinModelPortal:Q5HZV9
IntAct:Q5HZV9 STRING:Q5HZV9 PhosphoSite:Q5HZV9 PRIDE:Q5HZV9
Ensembl:ENSRNOT00000022854 GeneID:301618 KEGG:rno:301618
UCSC:RGD:1308169 InParanoid:Q5HZV9 NextBio:649024
Genevestigator:Q5HZV9 GermOnline:ENSRNOG00000016974 Uniprot:Q5HZV9
Length = 360
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 124 IQDKFSKFEEL-TSAALPYLGVSSPGA----NIGTIVTNLKELDLTGNLLSDWKDIGAFG 178
+ +K +K E + T L L + S NI T+ TNL+ L L N ++ +++ A
Sbjct: 172 VNNKINKIENISTLQQLQMLELGSNRIRAIENIDTL-TNLESLFLGKNKITKLQNLDA-- 228
Query: 179 EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L VL++ +N ++K + GL L ++R L L+ G+ +E L+++ L L +
Sbjct: 229 --LSNLTVLSMQSNRLTK-IEGLQNLVNLRELYLSHNGIE--VIEGLENN-NKLTMLDIA 282
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
N I +I +S LQ + DN + WS++ +L RSLE +YL +N L +
Sbjct: 283 SNRIKKIENISH-----LTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 335
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 53/213 (24%), Positives = 102/213 (47%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
+T L+ LD++ NLL + + I ++L L L L NN ++K + + L+ +++L L
Sbjct: 141 LTELEVLDISFNLLRNIEGI----DKLTQLKKLFLVNNKINK-IENISTLQQLQMLELGS 195
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ +E + +L LE L L N I+++ + + NL +L+++ N + +
Sbjct: 196 NRIR--AIENID-TLTNLESLFLGKNKITKLQNLDA-----LSNLTVLSMQSNRLTKIEG 247
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIY-YPNND--TIHELVSAHESHEESYLPFQNLCCLLLG 331
+ L +R +LYL+ N + I NN+ T+ ++ S E+ L +
Sbjct: 248 LQNLVNLR---ELYLSHNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMN 304
Query: 332 NNMIEDLASIDSLDSFPKLMDIRLSENPVS-DP 363
+N++E + +D L L + L NP+ DP
Sbjct: 305 DNLLESWSDLDELKGARSLETVYLERNPLQKDP 337
>UNIPROTKB|D2HFU1 [details] [associations]
symbol:PANDA_009788 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISS] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISS] [GO:0031901 "early endosome membrane"
evidence=ISS] [GO:0032588 "trans-Golgi network membrane"
evidence=ISS] [GO:0035594 "ganglioside binding" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0044091 "membrane biogenesis" evidence=ISS]
[GO:0045121 "membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 HOGENOM:HOG000007206 GO:GO:0035594 GO:GO:0072321
GO:GO:0044091 GO:GO:0018230 EMBL:GL192794 Uniprot:D2HFU1
Length = 504
Score = 138 (53.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 294 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 350
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 351 GLFASVSKISKVVDAP 366
>POMBASE|SPAC13D6.05 [details] [associations]
symbol:alp11 "tubulin specific chaperone cofactor B"
species:4896 "Schizosaccharomyces pombe" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005874 "microtubule" evidence=IEA] [GO:0006457
"protein folding" evidence=TAS] [GO:0007021 "tubulin complex
assembly" evidence=ISO] [GO:0043014 "alpha-tubulin binding"
evidence=IPI] [GO:0072668 "tubulin complex biogenesis"
evidence=ISO] InterPro:IPR000938 InterPro:IPR000626 SMART:SM00213
PomBase:SPAC13D6.05 Pfam:PF01302 GO:GO:0005829 GO:GO:0005634
GO:GO:0006457 GO:GO:0000226 EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:AB008750 PIR:T43283 RefSeq:NP_593683.2
ProteinModelPortal:Q10235 STRING:Q10235 EnsemblFungi:SPAC13D6.05.1
GeneID:2542814 KEGG:spo:SPAC13D6.05 eggNOG:COG5244
HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D NextBio:20803856
GO:GO:0005874 GO:GO:0007021 Gene3D:2.30.30.190 InterPro:IPR019955
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
PROSITE:PS50053 Uniprot:Q10235
Length = 234
Score = 131 (51.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGT--WLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
L R +A + R GT++Y+G V + W+GV++D GK+DG+++G RYF AK+ K
Sbjct: 154 LNSRCCAAGE--RYGTIRYIGLVPEINNDNLWVGVEFDEPVGKNDGTVSGKRYFNAKN-K 210
Query: 69 SGSFVRVHNLSPGISLPE 86
GSF+R + G PE
Sbjct: 211 HGSFLRSSEVEVGDFPPE 228
>UNIPROTKB|Q3T0W4 [details] [associations]
symbol:PPP1R7 "Protein phosphatase 1 regulatory subunit 7"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 EMBL:BC102228 IPI:IPI00685276
RefSeq:NP_001029410.1 UniGene:Bt.48815 ProteinModelPortal:Q3T0W4
STRING:Q3T0W4 PRIDE:Q3T0W4 Ensembl:ENSBTAT00000001045 GeneID:505297
KEGG:bta:505297 CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161
InParanoid:Q3T0W4 OMA:PQYRRKI OrthoDB:EOG4894MX NextBio:20867069
Uniprot:Q3T0W4
Length = 360
Score = 135 (52.6 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 55/178 (30%), Positives = 90/178 (50%)
Query: 124 IQDKFSKFEELTSA-ALPYLGVSSPGA----NIGTIVTNLKELDLTGNLLSDWKDIGAFG 178
+ +K +K E ++S L L + S NI T+ TNL+ L L N ++ +++ A
Sbjct: 172 VNNKINKIENISSLHQLQMLELGSNRIRAIENIDTL-TNLESLFLGKNKITKLQNLDA-- 228
Query: 179 EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L VL++ +N ++K + GL L ++R L L+ G+ +E L ++ L L +
Sbjct: 229 --LTNLTVLSMQSNRLTK-IEGLQSLVNLRELYLSHNGIE--VIEGLDNN-NKLTMLDIA 282
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
N I +I VS LQ + DN + WS++ +L RSLE +YL +N L R
Sbjct: 283 SNRIKKIENVSH-----LTELQEFWMNDNLLDCWSDLDELKGARSLETVYLERNPLQR 335
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 52/213 (24%), Positives = 101/213 (47%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
+T L+ LD++ NLL + + I ++L L L L NN ++K + + L +++L L
Sbjct: 141 LTELEVLDISFNLLRNIEGI----DKLTRLKKLFLVNNKINK-IENISSLHQLQMLELGS 195
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ +E + +L LE L L N I+++ + + NL +L+++ N + +
Sbjct: 196 NRIR--AIENID-TLTNLESLFLGKNKITKLQNLDA-----LTNLTVLSMQSNRLTKIEG 247
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIY-YPNND--TIHELVSAHESHEESYLPFQNLCCLLLG 331
+ L +R +LYL+ N + I NN+ T+ ++ S E+ L +
Sbjct: 248 LQSLVNLR---ELYLSHNGIEVIEGLDNNNKLTMLDIASNRIKKIENVSHLTELQEFWMN 304
Query: 332 NNMIEDLASIDSLDSFPKLMDIRLSENPVS-DP 363
+N+++ + +D L L + L NP+ DP
Sbjct: 305 DNLLDCWSDLDELKGARSLETVYLERNPLQRDP 337
>UNIPROTKB|Q8HXL4 [details] [associations]
symbol:CKAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005634 GO:GO:0005737 eggNOG:COG5244
HOGENOM:HOG000209180 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 EMBL:AJ410870 CTD:1155
HOVERGEN:HBG003239 OMA:GKHDGMV OrthoDB:EOG44XJHQ HSSP:Q20728
EMBL:CU694686 RefSeq:NP_001192332.1 UniGene:Ssc.3245 SMR:Q8HXL4
STRING:Q8HXL4 Ensembl:ENSSSCT00000003232 GeneID:100522808
KEGG:ssc:100522808 Uniprot:Q8HXL4
Length = 244
Score = 131 (51.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 11 LGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
+G R V + R GTV YVG G W+GV +D GK+DGS+NG RYF+ ++ K
Sbjct: 161 VGSRCEVRAPGQPPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQA-K 219
Query: 69 SGSFVRVHNLSPGISLPE 86
G+FV+ ++ G PE
Sbjct: 220 YGAFVKPSVVTVG-DFPE 236
>ZFIN|ZDB-GENE-070117-2205 [details] [associations]
symbol:dctn1a "dynactin 1a" species:7955 "Danio
rerio" [GO:0045176 "apical protein localization" evidence=IMP]
[GO:0040023 "establishment of nucleus localization" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0048663 "neuron fate commitment" evidence=IMP] [GO:0010842
"retina layer formation" evidence=IGI;IMP] [GO:0060219 "camera-type
eye photoreceptor cell differentiation" evidence=IGI]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-070117-2205
GO:GO:0010842 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0040023 GO:GO:0048663
GO:GO:0045176 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 GO:GO:0060219 EMBL:CR926130 EMBL:CT030017
IPI:IPI00960481 Ensembl:ENSDART00000015410 Uniprot:E7F1E0
Length = 1226
Score = 119 (46.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G V +R GTV Y+G SG W+GV D GK+DG++ G RYF + +
Sbjct: 11 KVGSVVEVIGKGQR-GTVAYIGATLFASGKWVGVILDEAKGKNDGTVQGKRYFTCE-ENH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
Score = 71 (30.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 159 KELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRIL-VLNCTGV 217
++ DLTG L GA GEQL + L S L+ + SI I+ V G+
Sbjct: 583 EKFDLTGGSLERAGLRGAAGEQLSFASGLVYSLTLLQATLHKYELYVSISIIHVYKRMGM 642
Query: 218 NWMQVEILKHSLPALEELHLMGNSISE---ITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ ++ + + SL L +L L + + E + P++ + Q ++ L + ++C + ++
Sbjct: 643 LYSEMCVHERSLDFLIDL-LHKDQLDETVQVEPLTKAVFQHLYSVHLCDQPEDCTVQLAD 701
Query: 275 ILKLCQ 280
+K Q
Sbjct: 702 HIKFTQ 707
>UNIPROTKB|C9JJD0 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00873712 ProteinModelPortal:C9JJD0 SMR:C9JJD0 STRING:C9JJD0
Ensembl:ENST00000454119 HOGENOM:HOG000213789 ArrayExpress:C9JJD0
Bgee:C9JJD0 Uniprot:C9JJD0
Length = 121
Score = 114 (45.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>UNIPROTKB|C9JJN7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00465112 ProteinModelPortal:C9JJN7 SMR:C9JJN7 STRING:C9JJN7
PRIDE:C9JJN7 Ensembl:ENST00000437375 ArrayExpress:C9JJN7
Bgee:C9JJN7 Uniprot:C9JJN7
Length = 87
Score = 114 (45.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>UNIPROTKB|C9JTE5 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JTE5 SMR:C9JTE5 STRING:C9JTE5
Ensembl:ENST00000421392 ArrayExpress:C9JTE5 Bgee:C9JTE5
Uniprot:C9JTE5
Length = 76
Score = 114 (45.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>UNIPROTKB|C9JZA4 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JZA4 SMR:C9JZA4
Ensembl:ENST00000413111 Bgee:C9JZA4 Uniprot:C9JZA4
Length = 76
Score = 114 (45.2 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>MGI|MGI:1913635 [details] [associations]
symbol:Ppp1r7 "protein phosphatase 1, regulatory (inhibitor)
subunit 7" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1913635
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161 OMA:PQYRRKI
OrthoDB:EOG4894MX EMBL:AF067129 EMBL:AF222867 EMBL:AK009870
EMBL:AK145136 EMBL:AK162517 EMBL:BC013524 IPI:IPI00129319
RefSeq:NP_075689.1 UniGene:Mm.88704 ProteinModelPortal:Q3UM45
SMR:Q3UM45 STRING:Q3UM45 REPRODUCTION-2DPAGE:Q3UM45 PaxDb:Q3UM45
PRIDE:Q3UM45 Ensembl:ENSMUST00000027494 GeneID:66385 KEGG:mmu:66385
UCSC:uc007cdv.1 InParanoid:Q3UM45 NextBio:321517 Bgee:Q3UM45
Genevestigator:Q3UM45 GermOnline:ENSMUSG00000026275 Uniprot:Q3UM45
Length = 361
Score = 134 (52.2 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 52/178 (29%), Positives = 91/178 (51%)
Query: 124 IQDKFSKFEELTSA-ALPYLGVSSPGA----NIGTIVTNLKELDLTGNLLSDWKDIGAFG 178
+ +K +K E +++ L L + S NI T+ TNL+ L L N ++ +++ A
Sbjct: 173 VNNKINKIENISNLHQLQMLELGSNRIRAIENIDTL-TNLESLFLGKNKITKLQNLDA-- 229
Query: 179 EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L VL++ +N ++K + GL L ++R L L+ G+ +E L+++ L L +
Sbjct: 230 --LTNLTVLSVQSNRLAK-IEGLQSLVNLRELYLSNNGIE--VIEGLENN-NKLTMLDIA 283
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
N I +I +S LQ + DN + WS++ +L RSLE +YL +N L +
Sbjct: 284 SNRIKKIENISH-----LTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 336
Score = 124 (48.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 53/213 (24%), Positives = 102/213 (47%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
+T L+ LD++ N+L + + I ++L L L L NN ++K + + L +++L L
Sbjct: 142 LTELEVLDISFNMLRNIEGI----DKLTQLKKLFLVNNKINK-IENISNLHQLQMLELGS 196
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ +E + +L LE L L N I+++ + + NL +L+++ N +A+
Sbjct: 197 NRIR--AIENID-TLTNLESLFLGKNKITKLQNLDA-----LTNLTVLSVQSNRLAKIEG 248
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIY-YPNND--TIHELVSAHESHEESYLPFQNLCCLLLG 331
+ L +R +LYL+ N + I NN+ T+ ++ S E+ L +
Sbjct: 249 LQSLVNLR---ELYLSNNGIEVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMN 305
Query: 332 NNMIEDLASIDSLDSFPKLMDIRLSENPVS-DP 363
+N++E + +D L L + L NP+ DP
Sbjct: 306 DNLLESWSDLDELKGARSLETVYLERNPLQKDP 338
>UNIPROTKB|Q5E951 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9913 "Bos
taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
Reactome:REACT_17065 InterPro:IPR000938 Pfam:PF01302 GO:GO:0005829
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 Reactome:REACT_103209
eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 GO:GO:0007023
EMBL:BT021069 EMBL:BC102571 IPI:IPI00697178 RefSeq:NP_001014939.1
UniGene:Bt.55460 ProteinModelPortal:Q5E951 SMR:Q5E951 STRING:Q5E951
PRIDE:Q5E951 Ensembl:ENSBTAT00000019973 GeneID:530447
KEGG:bta:530447 CTD:1155 HOVERGEN:HBG003239 InParanoid:Q5E951
OMA:GKHDGMV OrthoDB:EOG44XJHQ NextBio:20875260 Uniprot:Q5E951
Length = 244
Score = 130 (50.8 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 11 LGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
+G R V + R GTV YVG G W+G+ +D GK+DGS+NG RYF+ ++ K
Sbjct: 161 VGSRCEVRTPGQPPRRGTVMYVGLTDFKPGYWIGIRYDEPLGKNDGSVNGKRYFECQA-K 219
Query: 69 SGSFVRVHNLSPGISLPE 86
G+FV+ ++ G PE
Sbjct: 220 YGAFVKPSVVTVG-DFPE 236
>UNIPROTKB|Q724E1 [details] [associations]
symbol:inlE "Internalin E" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012893.1 ProteinModelPortal:Q724E1
SMR:Q724E1 STRING:Q724E1 GeneID:2799899 KEGG:lmf:LMOf2365_0283
PATRIC:20321779 OMA:FTENEEP ProtClustDB:CLSK491300 Uniprot:Q724E1
Length = 499
Score = 136 (52.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 82/316 (25%), Positives = 142/316 (44%)
Query: 82 ISLPEALRVRYR-GESSKEEEDEMYVLSASNKHVSIELVGKDKIQ---DKFSKFEELTSA 137
++L L + + G SSKE + + + + V D ++ +K +E+T
Sbjct: 12 VTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLEKADVTDEVTQT 71
Query: 138 ALPYLG-VSSPGANIGTI-----VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSN 191
L + +S+ A I TI +TNL EL+LT N ++D + L + L LS
Sbjct: 72 DLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLA----NLTKITELGLSG 127
Query: 192 NLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSS- 250
N + K+V+ L LKS+++L L T + V L L L+EL+L N I++I+P+++
Sbjct: 128 NPL-KDVSALAGLKSLKMLHLIYTDIT--DVTSLA-GLTNLQELNLDINQITDISPLAAL 183
Query: 251 -----------------PIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
PI L +LN E NC + S+I L + SL ++YL +N
Sbjct: 184 SNLQTLSLGYTQVSDLTPIAN-LSKLTILNAE-NC--KVSDISPLASLSSLTEVYLRENQ 239
Query: 294 LNRIY----YPNNDTIH---ELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDS 346
++ + PN I ++++ + ++ + N+ L G + D S + +
Sbjct: 240 ISDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVPNVIKGLSGELIAPDTISDNGTYT 299
Query: 347 FPKLM-DIRLSENPVS 361
P L D+ N VS
Sbjct: 300 SPDLTWDLNSYINSVS 315
>ZFIN|ZDB-GENE-051113-288 [details] [associations]
symbol:ppp1r7 "protein phosphatase 1, regulatory
(inhibitor) subunit 7" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-051113-288 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 CTD:5510 HOGENOM:HOG000211189
HOVERGEN:HBG082161 OMA:PQYRRKI OrthoDB:EOG4894MX EMBL:BC108074
IPI:IPI00501923 RefSeq:NP_001032463.1 UniGene:Dr.76971
ProteinModelPortal:Q32PL1 STRING:Q32PL1 Ensembl:ENSDART00000022356
GeneID:560323 KEGG:dre:560323 InParanoid:Q32PL1 NextBio:20883385
Bgee:Q32PL1 Uniprot:Q32PL1
Length = 345
Score = 133 (51.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 57/213 (26%), Positives = 105/213 (49%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
+T L++LD++ NLL + + + L + L L +N ++ + L L S+++L L
Sbjct: 126 LTELEQLDVSFNLLRKIEGL----DSLTKVKKLFLLHNKIAS-IANLDHLTSLQMLEL-- 178
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
G N ++V SL +LE L L N I+++ + G NL +L+++ N I +
Sbjct: 179 -GSNRIRVIENLDSLSSLESLFLGTNKITQLQNLD-----GLHNLTVLSIQSNRITKLEG 232
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIY-YPNNDTIHEL-VSAHESHE-ESYLPFQNLCCLLLG 331
+ L +R +LYL+ N + + NN + L ++A+ + E+ +L +
Sbjct: 233 LQNLVNLR---ELYLSHNGIEVMEGLENNKKLSTLDIAANRIKKIENISHLTDLKEFWMN 289
Query: 332 NNMIEDLASIDSLDSFPKLMDIRLSENPVS-DP 363
+N IE+ A +D L + L + L NP+ DP
Sbjct: 290 DNQIENWADLDELKNAKGLETVYLERNPLQKDP 322
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 70/258 (27%), Positives = 115/258 (44%)
Query: 54 GSINGVRYF-QAK--SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEE----DEMYV 106
G I G+ +AK S + R+ NL +SL E L + Y + K E E+
Sbjct: 74 GKIEGLEVLLKAKTISLRQNLIKRIENLESLVSLRE-LDL-YDNQIRKLENLQALTELEQ 131
Query: 107 LSAS-NKHVSIE-LVGKDKIQDKFSKFEELTSAA----LPYLGVSSPGANIGTIVTNLKE 160
L S N IE L K++ F ++ S A L L + G+N ++ NL
Sbjct: 132 LDVSFNLLRKIEGLDSLTKVKKLFLLHNKIASIANLDHLTSLQMLELGSNRIRVIENLDS 191
Query: 161 LDLTGNLLSDWKDIGAFG--EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVN 218
L +L I + L L VL++ +N ++K + GL L ++R L L+ G+
Sbjct: 192 LSSLESLFLGTNKITQLQNLDGLHNLTVLSIQSNRITK-LEGLQNLVNLRELYLSHNGIE 250
Query: 219 WMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKL 278
M E L+++ L L + N I +I +S +L+ + DN I W+++ +L
Sbjct: 251 VM--EGLENN-KKLSTLDIAANRIKKIENISH-----LTDLKEFWMNDNQIENWADLDEL 302
Query: 279 CQIRSLEQLYLNKNNLNR 296
+ LE +YL +N L +
Sbjct: 303 KNAKGLETVYLERNPLQK 320
>RGD|1309991 [details] [associations]
symbol:Podn "podocan" species:10116 "Rattus norvegicus"
[GO:0032934 "sterol binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003033 Pfam:PF02036 PROSITE:PS51450
RGD:1309991 RGD:3642 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0030336 GO:GO:0032934
SUPFAM:SSF55718 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 EMBL:AY539911 IPI:IPI00421405 SMR:Q6QI48
IntAct:Q6QI48 STRING:Q6QI48 Ensembl:ENSRNOT00000015466
InParanoid:Q6QI48 Genevestigator:Q6QI48 Uniprot:Q6QI48
Length = 643
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 66/219 (30%), Positives = 109/219 (49%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LTS L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 173 FEHLTS--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 227
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 228 YLHNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 281
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 282 EKIPPGA---FSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 338
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNNMIE 336
P + + H + +S + L P +NL LLL +N ++
Sbjct: 339 PRSLVLLHLEKNVIQSVDADVLTPIRNLEYLLLHSNQLQ 377
>UNIPROTKB|Q6QI48 [details] [associations]
symbol:Scp2 "LRRGT00160" species:10116 "Rattus norvegicus"
[GO:0032934 "sterol binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003033 Pfam:PF02036 PROSITE:PS51450
RGD:1309991 RGD:3642 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0030336 GO:GO:0032934
SUPFAM:SSF55718 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 EMBL:AY539911 IPI:IPI00421405 SMR:Q6QI48
IntAct:Q6QI48 STRING:Q6QI48 Ensembl:ENSRNOT00000015466
InParanoid:Q6QI48 Genevestigator:Q6QI48 Uniprot:Q6QI48
Length = 643
Score = 137 (53.3 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 66/219 (30%), Positives = 109/219 (49%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LTS L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 173 FEHLTS--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 227
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 228 YLHNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 281
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 282 EKIPPGA---FSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 338
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNNMIE 336
P + + H + +S + L P +NL LLL +N ++
Sbjct: 339 PRSLVLLHLEKNVIQSVDADVLTPIRNLEYLLLHSNQLQ 377
>UNIPROTKB|A4D1F6 [details] [associations]
symbol:LRRD1 "Leucine-rich repeat and death
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] Pfam:PF00560
InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:CH236949 Gene3D:1.10.533.10 InterPro:IPR011029
EMBL:AC000120 InterPro:IPR025875 Pfam:PF12799 EMBL:BC026112
EMBL:BC144674 EMBL:BC144678 IPI:IPI00887636 IPI:IPI00935774
RefSeq:NP_001155000.1 UniGene:Hs.671729 ProteinModelPortal:A4D1F6
SMR:A4D1F6 PhosphoSite:A4D1F6 PRIDE:A4D1F6 Ensembl:ENST00000343318
Ensembl:ENST00000430130 Ensembl:ENST00000458448 GeneID:401387
KEGG:hsa:401387 UCSC:uc011khp.1 CTD:401387 GeneCards:GC07M091743
HGNC:HGNC:34300 neXtProt:NX_A4D1F6 HOVERGEN:HBG108705
InParanoid:A4D1F6 OMA:CNKFETF OrthoDB:EOG4K6G5V GenomeRNAi:401387
NextBio:106780 ArrayExpress:A4D1F6 Bgee:A4D1F6
Genevestigator:A4D1F6 Uniprot:A4D1F6
Length = 860
Score = 137 (53.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 73/296 (24%), Positives = 136/296 (45%)
Query: 86 EALRVRYRGESSKEEEDEMY----VLSASNKHVS-----IELVGKDKIQDKFSKFEELTS 136
E L ++ G SS E ++ +L+ S+ H+S I +G + ++ + E
Sbjct: 191 EILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFP 250
Query: 137 AALPYLG---VSSPGAN-IGTIVTNLKELDLTGNLLSDWKDIGAFGEQL---PALAVLNL 189
+ L LG + S G N + I L L L ++ + F + L P L L+L
Sbjct: 251 SDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDL 310
Query: 190 SNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVS 249
+ NL+S + +LK++ L+++ + ++ VEI + L ++EL L N + I
Sbjct: 311 TGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQ--LLKIKELQLADNKLEVI---- 364
Query: 250 SPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI--YYPNNDTIHE 307
S ++ F L++L L+ N + E + C + LE L L+ N L + Y + + +
Sbjct: 365 SHKIENFRELRILILDKNLLKNIPEKISCCAM--LECLSLSDNKLTELPKYIHKLNNLRK 422
Query: 308 L-VSAHESHE--ESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPV 360
L V+ + + + N+C L N+I D+ I+ + + K++ I LS N +
Sbjct: 423 LHVNRNNMVKITDCISHLNNICSLEFSGNIITDVP-IE-IKNCQKIIKIELSYNKI 476
>WB|WBGene00011345 [details] [associations]
symbol:dma-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016358
"dendrite development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 EMBL:Z75713 PIR:T24315
RefSeq:NP_492253.1 ProteinModelPortal:Q22075 SMR:Q22075
STRING:Q22075 PaxDb:Q22075 EnsemblMetazoa:T01G9.3 GeneID:187968
KEGG:cel:CELE_T01G9.3 UCSC:T01G9.3 CTD:187968 WormBase:T01G9.3
HOGENOM:HOG000017308 InParanoid:Q22075 OMA:LTMANTH NextBio:937126
Uniprot:Q22075
Length = 603
Score = 135 (52.6 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 42/131 (32%), Positives = 74/131 (56%)
Query: 180 QLPALAVLNL-SNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
+LP+L VL+L SNN+ ++ + +R+L L+ +N + + + L AL L L
Sbjct: 109 RLPSLEVLDLHSNNIEHATMSNFGGMPKLRVLDLSSNHLNILPTGVFTY-LRALRSLSLS 167
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRI 297
N+IS++ S+ +++G ++L++L L+ N I I +L + L++LYLN NL+ I
Sbjct: 168 NNTISDL---STNLLRGLNSLRVLRLDRNPIPI-EHINELFTDVSQLDELYLNHCNLSSI 223
Query: 298 YYPNNDTIHEL 308
Y D I +L
Sbjct: 224 YSLALDRIPQL 234
>UNIPROTKB|Q940E8 [details] [associations]
symbol:fea2 "Fasciated ear2" species:4577 "Zea mays"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009908 "flower
development" evidence=IMP] [GO:0048509 "regulation of meristem
development" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR013210
Pfam:PF08263 EMBL:AY055124 EMBL:BT042749 EMBL:CM000780
RefSeq:NP_001105662.1 UniGene:Zm.1097 GeneID:542675 KEGG:zma:542675
HOGENOM:HOG000239232 OMA:YLATWIG Uniprot:Q940E8
Length = 613
Score = 132 (51.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 79/245 (32%), Positives = 113/245 (46%)
Query: 133 ELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLP-ALAVLNLSN 191
EL+ L GV P A + ++ L+ LDL+ N LS G LP +L L+LS
Sbjct: 84 ELSLRGLNLTGVI-PAAPLA-LLRRLRTLDLSANALS-----GELPCSLPRSLLALDLSR 136
Query: 192 NLMSKEV-TGLPQ-LKSIRILVLNCTGVNWMQVEILKH-SLPA-LEELHLMGNSISEITP 247
N +S V T LP L ++R L L+ N++++ + S PA L L L N+IS P
Sbjct: 137 NALSGAVPTCLPSSLPALRTLNLSA---NFLRLPLSPRLSFPARLAALDLSRNAISGAVP 193
Query: 248 VSSPIVQGFDN--LQLLNLEDNCIAEWSEI-LKLCQIRSLEQLYLNKNNLNRIYYPN--N 302
IV DN L LL+L N + EI + +RSL+ L+L N L+ P N
Sbjct: 194 PR--IVADPDNSALLLLDLSHNRFS--GEIPAGIAAVRSLQGLFLADNQLSGDIPPGIGN 249
Query: 303 DTIHELVSAHESHEESYLP------FQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLS 356
T +++ + +P FQ L L LG N + A LD+ L + LS
Sbjct: 250 LTYLQVLDLSNNRLSGSVPAGLAGCFQ-LLYLQLGGNQLSG-ALRPELDALASLKVLDLS 307
Query: 357 ENPVS 361
N +S
Sbjct: 308 NNKIS 312
>UNIPROTKB|G4N707 [details] [associations]
symbol:MGG_03649 "Protein phosphatase 1 regulatory subunit
SDS22" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875
Pfam:PF12799 EMBL:CM001234 KO:K01768 RefSeq:XP_003716239.1
ProteinModelPortal:G4N707 EnsemblFungi:MGG_03649T0 GeneID:2676634
KEGG:mgr:MGG_03649 Uniprot:G4N707
Length = 381
Score = 129 (50.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 73/284 (25%), Positives = 132/284 (46%)
Query: 127 KFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAV 186
K +F+++ S L V + + L+ELDL NL++ K +G +L AL
Sbjct: 111 KLERFKQVVSLCLRQ-NVIQEIDGLACLAGTLQELDLYDNLITHIKGLG----ELKALTW 165
Query: 187 LNLSNNLMSK--EVTGLPQLKSI-----RILVL-NCTGVNWMQV-EILKH---------S 228
L+LS N + + V L +L + +I + N G+N +++ E+ + S
Sbjct: 166 LDLSFNKIKRIENVNHLTELTDLFFVANKIRTIENLEGLNKLRMLELGSNRIREMQNLDS 225
Query: 229 LPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLY 288
L L+EL++ N I+++T ++ G L+LL+++ N I + S LK + +LE+LY
Sbjct: 226 LKELQELYVAKNKITQLTGLA-----GLPKLRLLSIQSNRIQDLSP-LK--DVHTLEELY 277
Query: 289 LNKNNLNRIY-YPNNDTIHEL-VSAHE-SHEESYLPFQNLCCLLLGNNMIEDLASIDS-L 344
+ N L + +N + L VS ++ S + P + L N I D A ++ L
Sbjct: 278 ITHNALTSLEGLEHNINLKVLDVSNNQISSLKGLGPLKELTDFWASYNQIADFAEVEKEL 337
Query: 345 DSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEV 388
L + L NP+ G + R + L ++K ++ + V
Sbjct: 338 KDKENLETVYLEGNPLQLRGPA-LYRNKVRLALPQVKQIDATFV 380
>UNIPROTKB|Q723K6 [details] [associations]
symbol:inlA "Internalin-A" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00746 GO:GO:0005618
GO:GO:0005576 GO:GO:0009405 eggNOG:COG4886 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0030260 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR019948
InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847 EMBL:U25445
RefSeq:YP_013078.1 ProteinModelPortal:Q723K6 STRING:Q723K6
GeneID:2798475 KEGG:lmf:LMOf2365_0471 PATRIC:20322143 KO:K13730
OMA:NLTNINW ProtClustDB:CLSK225140 Gene3D:2.60.40.1220
InterPro:IPR014755 InterPro:IPR013378 InterPro:IPR012569
Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543 Uniprot:Q723K6
Length = 800
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 66/274 (24%), Positives = 131/274 (47%)
Query: 118 LVGKDKIQDKFSK--FEELTSAALPYLGVSS-PGANIGTIVTNLKELDLTGNLLSDWKDI 174
++GK + D S+ +++T+ LG+ S G + NL +++ + N L+D +
Sbjct: 60 VLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEY---LNNLTQINFSNNQLTDITPL 116
Query: 175 GAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEE 234
+ L L + ++NN ++ ++T L L ++ L L + ++ LK+ L L
Sbjct: 117 ----KDLTKLVDILMNNNQIA-DITPLANLSNLTGLTLFNNQIT--DIDPLKN-LTNLNR 168
Query: 235 LHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNL 294
L L N+IS+I+ +S G +LQ L+ + +++ L + +LE+L ++ N +
Sbjct: 169 LELSSNTISDISALS-----GLTSLQQLSFGNQV----TDLKPLANLTTLERLDISSNKV 219
Query: 295 NRIYYPNNDTIHELVSAHESHEESYLPF---QNLCCLLLGNNMIEDLASIDSLDSFPKLM 351
+ I T E + A + P NL L L N ++D+ ++ SL + L
Sbjct: 220 SDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTN---LT 276
Query: 352 DIRLSENPVSDPGR-GGISRFAIIARLGKIKILN 384
D+ L+ N +S+ G+++ + +LG +I N
Sbjct: 277 DLDLANNQISNLAPLSGLTKLTEL-KLGANQISN 309
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 56/183 (30%), Positives = 85/183 (46%)
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSK--EVTGLPQLKSIRILV 211
I+TNL EL L GN L KDIG L L L+L+NN +S ++GL +L +++
Sbjct: 249 ILTNLDELSLNGNQL---KDIGTLAS-LTNLTDLDLANNQISNLAPLSGLTKLTELKL-- 302
Query: 212 LNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAE 271
G N + L AL L L N + +I+P+S+ NL L L N I++
Sbjct: 303 ----GANQISNISPLAGLTALTNLELNENQLEDISPISN-----LKNLTYLTLYFNNISD 353
Query: 272 WSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLL-L 330
S + L + L++L+ N ++ + N T +SA + P NL + L
Sbjct: 354 ISPVSSLTK---LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQL 410
Query: 331 GNN 333
G N
Sbjct: 411 GLN 413
>UNIPROTKB|C9J1B7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916125 ProteinModelPortal:C9J1B7 SMR:C9J1B7 STRING:C9J1B7
Ensembl:ENST00000440727 ArrayExpress:C9J1B7 Bgee:C9J1B7
Uniprot:C9J1B7
Length = 64
Score = 106 (42.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYF 62
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYF 62
>FB|FBgn0019968 [details] [associations]
symbol:Khc-73 "Kinesin-73" species:7227 "Drosophila
melanogaster" [GO:0003777 "microtubule motor activity"
evidence=ISS;IDA] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0005871 "kinesin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0051294 "establishment of spindle orientation"
evidence=IMP] [GO:0050803 "regulation of synapse structure and
activity" evidence=IMP] [GO:0035371 "microtubule plus end"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
SMART:SM00240 Pfam:PF01302 EMBL:AE013599 GO:GO:0005524
GO:GO:0005871 GO:GO:0042803 GeneTree:ENSGT00700000104150
GO:GO:0050803 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005769 GO:GO:0003777 GO:GO:0035371
GO:GO:0007018 Gene3D:3.40.850.10 GO:GO:0051294 KO:K10392
OMA:SKNGQPA InterPro:IPR022140 InterPro:IPR022164 Pfam:PF12473
Pfam:PF12423 RefSeq:NP_609201.3 RefSeq:NP_788356.1 UniGene:Dm.350
SMR:A1ZA18 IntAct:A1ZA18 STRING:A1ZA18 EnsemblMetazoa:FBtr0087357
GeneID:36718 KEGG:dme:Dmel_CG8183 UCSC:CG8183-RA CTD:36718
FlyBase:FBgn0019968 InParanoid:A1ZA18 OrthoDB:EOG48W9GT
GenomeRNAi:36718 NextBio:800035 Uniprot:A1ZA18
Length = 1921
Score = 135 (52.6 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 25 GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGISL 84
G +++VG + G W+GV+ D GK+DGS+ GV+YFQ K K G FVR L
Sbjct: 1820 GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKP-KHGMFVRSDKLMLD-KR 1877
Query: 85 PEALRVRYRGESSKEEEDEM 104
+A+R E S EM
Sbjct: 1878 GKAMRAYKAAEKSNSISKEM 1897
>UNIPROTKB|I3LGS7 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090004 "positive regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0072321
"chaperone-mediated protein transport" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0045807 "positive
regulation of endocytosis" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0044091 "membrane biogenesis" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035594 "ganglioside binding" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0031115
"negative regulation of microtubule polymerization" evidence=IEA]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=IEA]
[GO:0010828 "positive regulation of glucose transport"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000938 SMART:SM00248 Pfam:PF01302
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 GeneTree:ENSGT00700000104055 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CU694686 Ensembl:ENSSSCT00000022327 Uniprot:I3LGS7
Length = 551
Score = 128 (50.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG + S + + GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K G
Sbjct: 299 LGDKGLSQSQ-KTTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQG 356
Query: 71 SFVRVHNLSPGISLP 85
F V +S + P
Sbjct: 357 LFASVSKISKAVDAP 371
>UNIPROTKB|O42184 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0044354 "macropinosome" evidence=IEA]
[GO:0051010 "microtubule plus-end binding" evidence=IEA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
Pfam:PF01302 GO:GO:0005813 GO:GO:0046872 GO:GO:0006810
GO:GO:0008270 GO:GO:0003676 GO:GO:0030659 GO:GO:0001726
GO:GO:0044354 GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:AF014012 EMBL:AF020764
EMBL:AF045650 EMBL:AF045651 IPI:IPI00572978 IPI:IPI00576988
IPI:IPI00582575 IPI:IPI00603875 RefSeq:NP_990273.1 UniGene:Gga.3130
ProteinModelPortal:O42184 SMR:O42184 STRING:O42184 PRIDE:O42184
Ensembl:ENSGALT00000007110 Ensembl:ENSGALT00000007113 GeneID:395784
KEGG:gga:395784 CTD:6249 HOGENOM:HOG000092755 HOVERGEN:HBG007123
InParanoid:O42184 KO:K10421 OMA:SRTEGEA OrthoDB:EOG42Z4PQ
NextBio:20815852 Uniprot:O42184
Length = 1433
Score = 123 (48.4 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 57 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 114
Query: 67 QKSGSFVRVHNLS 79
+ G F R LS
Sbjct: 115 LR-GIFTRPSKLS 126
Score = 121 (47.7 bits), Expect = 8.0e-05, Sum P(3) = 8.0e-05
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + +
Sbjct: 216 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-RY 272
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 273 GLFAPVHKVTK-IGFP 287
Score = 62 (26.9 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 53/225 (23%), Positives = 97/225 (43%)
Query: 86 EALRVRYRGESSKEE-EDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGV 144
E ++ + ESS+E E+ LSASN+ + E + ++ K + S + L
Sbjct: 559 EMSSLKEKFESSEEALRKEIKTLSASNERMGKE---NESLKTKLDHANKENSDVIE-LWK 614
Query: 145 SSPGANIGTIVTNLKELDLTGNLLSDWKDIGA----FGEQLPALAVLNLS-----NNLMS 195
S + I + ++EL ++ N K +GA F E + + L +NL
Sbjct: 615 SKLESAIASHQQAMEELKVSFN-----KGVGAQTAEFAELKTQMEKVKLDYENEMSNLKL 669
Query: 196 KEVTGLPQ-LKSIRIL---VLNCTGVNWMQVEILKHSLPALEELHL--MGNSISEITPVS 249
K+ Q LK I L +L T +E LK L ++E+ HL M ++++++
Sbjct: 670 KQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAE 729
Query: 250 SPIVQGFDNLQL-LNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
+ + D LQ N + I ++ ++ + + L+ L K N
Sbjct: 730 IKVKE-LDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKAN 773
Score = 38 (18.4 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 308 LVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDS 343
+V +EE L Q +C L N E+ + DS
Sbjct: 1326 IVDLQRRNEELNLKIQRMCEAALNGNE-EETINYDS 1360
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 125 (49.1 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 67/244 (27%), Positives = 113/244 (46%)
Query: 128 FSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
FS+ + L S L + + + L L L+ N +S K GAF E L L L
Sbjct: 75 FSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKP-GAF-EDLTELTYL 132
Query: 188 NLSNNLMSKEVTGL--PQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEI 245
L N ++ G+ P + ++ IL LN + +Q K + L L++ GN +S I
Sbjct: 133 YLDGNQITSLPKGIFSPMI-NLFILQLNNNKLRELQPGTFKGAKD-LRWLYMSGNELSSI 190
Query: 246 TPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI---YYPNN 302
P S V+ NL +L L+ N ++ + +L + ++R +E+L L+KN L+ I + +
Sbjct: 191 QPGSLDEVE---NLAILTLDQNNLSTYP-LLAMSKLRVVEELNLSKNPLSLIPDHAFRSF 246
Query: 303 DTIHELVSAHESHEESY--LPFQNLCCLL---LGNNMIEDLASIDSLDSFPKLMDIRLSE 357
E + ++ E + F+ + L L NN + L + SL+ F + +I L
Sbjct: 247 GRYMEKLHLNDMSLEKFSNAAFEGVTALKSLHLENNKLRSLPN--SLE-FSTIQNITLFN 303
Query: 358 NPVS 361
NP S
Sbjct: 304 NPWS 307
>CGD|CAL0006089 [details] [associations]
symbol:orf19.6170 species:5476 "Candida albicans" [GO:0035371
"microtubule plus end" evidence=IEA] [GO:0005816 "spindle pole
body" evidence=IEA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0051285 "cell cortex of cell tip" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] [GO:0005876 "spindle
microtubule" evidence=IEA] [GO:0030437 "ascospore formation"
evidence=IEA] [GO:0051519 "activation of bipolar cell growth"
evidence=IEA] [GO:0000022 "mitotic spindle elongation"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0046785 "microtubule polymerization"
evidence=IEA] [GO:0000742 "karyogamy involved in conjugation with
cellular fusion" evidence=IEA] [GO:0000743 "nuclear migration
involved in conjugation with cellular fusion" evidence=IEA]
[GO:0031115 "negative regulation of microtubule polymerization"
evidence=IEA] [GO:0010570 "regulation of filamentous growth"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
InterPro:IPR000938 CGD:CAL0006089 Pfam:PF01302 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG254865 InterPro:IPR009053 SUPFAM:SSF46579
EMBL:AACQ01000225 RefSeq:XP_710927.1 GeneID:3647457
KEGG:cal:CaO19.6170 Uniprot:Q59MK2
Length = 292
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-----GKHDGSINGVRYFQAK 65
+G +V + A G ++YVG++QG GT+ GV+ G GK+ GS++G++YFQ +
Sbjct: 5 IGTKV-AIPGASGAGIIRYVGQIQGKIGTFAGVEL-LGTLATTRGKNSGSVDGIQYFQVE 62
Query: 66 SQKSGSFV---RVHNLSPGIS 83
KSG F+ R+ +++PG++
Sbjct: 63 IPKSGLFLPYERLKSVNPGLA 83
>UNIPROTKB|E1BHH6 [details] [associations]
symbol:PODN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005518
"collagen binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0030336 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00600000084286 OMA:SGNRLHT
EMBL:DAAA02008856 IPI:IPI00697572 Ensembl:ENSBTAT00000016614
Uniprot:E1BHH6
Length = 661
Score = 128 (50.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 65/218 (29%), Positives = 108/218 (49%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LT+ L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 190 FEHLTN--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 244
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 245 YLHNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 298
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 299 EKIPPGA---FSELSNLRELYLQNNHLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 355
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNNMI 335
P + + H +A S + L P ++L LLL +N +
Sbjct: 356 PRSLVLLHLEKNAIRSVDADVLTPIRSLEYLLLHSNQL 393
>FB|FBgn0038504 [details] [associations]
symbol:Sur-8 "Sur-8" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AE014297 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
OMA:LPHGIGN PANTHER:PTHR23155:SF38 ChiTaRS:SHOC2 EMBL:AY128499
EMBL:BT003235 RefSeq:NP_650620.3 RefSeq:NP_732231.2
UniGene:Dm.13957 ProteinModelPortal:Q9VEK6 SMR:Q9VEK6 STRING:Q9VEK6
PaxDb:Q9VEK6 PRIDE:Q9VEK6 EnsemblMetazoa:FBtr0083447
EnsemblMetazoa:FBtr0083448 EnsemblMetazoa:FBtr0333933 GeneID:42093
KEGG:dme:Dmel_CG5407 UCSC:CG5407-RA CTD:42093 FlyBase:FBgn0038504
InParanoid:Q8MQM0 OrthoDB:EOG4C867K PhylomeDB:Q9VEK6
GenomeRNAi:42093 NextBio:827133 Bgee:Q9VEK6 Uniprot:Q9VEK6
Length = 641
Score = 127 (49.8 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 53/172 (30%), Positives = 85/172 (49%)
Query: 122 DKIQ-DKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQ 180
DKI FS+ + LT + +++ +IGT V N+ EL+L N L D
Sbjct: 428 DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWV-NMVELNLATNALQKLPDDIM---N 483
Query: 181 LPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGN 240
L L +L LSNN++ K + L+ +RIL L N ++E+L H + L EL +
Sbjct: 484 LQNLEILILSNNMLKKIPNTIGNLRKLRILDLE---EN--RIEVLPHEIGLLHELQRLIL 538
Query: 241 SISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKN 292
++IT + I NL L++ +N + E ++ + SLE LY+N+N
Sbjct: 539 QTNQITMLPRSIGH-LGNLTHLSVSENNLQFLPE--EIGSLESLENLYINQN 587
>UNIPROTKB|I3LEB7 [details] [associations]
symbol:PODN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005518
"collagen binding" evidence=IEA] [GO:0032934 "sterol binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003033
Pfam:PF02036 PROSITE:PS51450 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 InterPro:IPR003591 SMART:SM00369 GO:GO:0030336
GO:GO:0032934 SUPFAM:SSF55718 GeneTree:ENSGT00600000084286
OMA:SGNRLHT EMBL:CU633966 EMBL:CU457407 Ensembl:ENSSSCT00000023638
Uniprot:I3LEB7
Length = 642
Score = 127 (49.8 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 64/218 (29%), Positives = 107/218 (49%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LT+ L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 172 FEHLTN--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 226
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 227 YLHNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 280
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 281 EKIPP---GVFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 337
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNNMI 335
P + + H +A + L P ++L LLL +N +
Sbjct: 338 PRSLVLLHLEKNAIRCVDADVLTPIRSLEYLLLHSNQL 375
>SGD|S000006095 [details] [associations]
symbol:NIP100 "Large subunit of the dynactin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000235 "astral
microtubule" evidence=IDA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IDA] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0008017 "microtubule
binding" evidence=ISS] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0003774 "motor
activity" evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
InterPro:IPR000938 SGD:S000006095 Pfam:PF01302 GO:GO:0000132
GO:GO:0005737 EMBL:BK006949 GO:GO:0005869 GO:GO:0008017
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0030286 GO:GO:0003774 EMBL:X72227 EMBL:Z73530 PIR:S65186
RefSeq:NP_015151.1 ProteinModelPortal:P33420 SMR:P33420
DIP:DIP-1473N IntAct:P33420 MINT:MINT-389199 STRING:P33420
PRIDE:P33420 EnsemblFungi:YPL174C GeneID:855929 KEGG:sce:YPL174C
CYGD:YPL174c GeneTree:ENSGT00700000104543 OMA:TIAHESA
OrthoDB:EOG4ZGSMC NextBio:980666 Genevestigator:P33420
GermOnline:YPL174C Uniprot:P33420
Length = 868
Score = 128 (50.1 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 62/254 (24%), Positives = 120/254 (47%)
Query: 3 DCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYF 62
D N + L V N+ + G VK++GE Q G W G++ D GK+DGS NG+RYF
Sbjct: 9 DTNMQKISLQDTV-LVNEMK--GRVKFIGETQFAKGIWYGIELDKPLGKNDGSANGIRYF 65
Query: 63 QAKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIE-LVGK 121
+K+ S + L + L+ Y K ++DE +L+ + +I+ L K
Sbjct: 66 DIDLKKANSNGGYYGL---FCKKDTLQF-Y-----KPDDDEHSLLNGNAAQETIKNLQVK 116
Query: 122 -DKIQDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWK-DIGAFGE 179
+ + K +K + + + L V N +++ + LD L+ + K + G
Sbjct: 117 CESLASKLNKIK-IENHELK-TSVEKLSTNETVLLSKISRLD---KLVKELKVENGNMKT 171
Query: 180 QLPALA-VLNLSNNLMSKEVTGLPQLKSIRIL--VLNCTGVNW-----MQVEILKHSLPA 231
L +L+ S+++M+ ++ L+ +L +L+ T +++ +Q ++L+ +
Sbjct: 172 HLDNFNHLLDASDSVMAPDLDKGTLLERSHLLQGLLDQTKLSYDKAMKVQEDLLEENTQL 231
Query: 232 LEELHLMGNSISEI 245
LEE ++ IS++
Sbjct: 232 LEENAVLSKKISDL 245
>UNIPROTKB|Q81YT0 [details] [associations]
symbol:BAS0520 "Putative internalin" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF05031 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR006635
PROSITE:PS50978 RefSeq:NP_843087.1 RefSeq:YP_017174.1
RefSeq:YP_026798.1 ProteinModelPortal:Q81YT0
EnsemblBacteria:EBBACT00000010697 EnsemblBacteria:EBBACT00000017841
EnsemblBacteria:EBBACT00000022856 GeneID:1087882 GeneID:2817231
GeneID:2849896 KEGG:ban:BA_0552 KEGG:bar:GBAA_0552 KEGG:bat:BAS0520
HOGENOM:HOG000083246 OMA:GLEYMTN ProtClustDB:CLSK915856
BioCyc:BANT260799:GJAJ-580-MONOMER
BioCyc:BANT261594:GJ7F-607-MONOMER Uniprot:Q81YT0
Length = 1070
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 121 KDKIQDKFSKFEELTSAA-LPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGE 179
K+ I D FS E +T+ L V+ A + + NLK +DL+ N + D K + + +
Sbjct: 559 KEGITD-FSGLEFMTNVEELTLQNVNMKNAEFISSLRNLKSVDLSYNQIEDIKPLHSLED 617
Query: 180 ------------------QLPALAVLNLSNN-LMSKEVTGLPQLKSIRILVLNCTGVNWM 220
++ L L+LSNN L + + G+ QL+++ L++N +N +
Sbjct: 618 LEKLNVSDNGIKNVPELFKMQKLKTLDLSNNKLDNAALDGIHQLENLDALLVNNNEINNL 677
Query: 221 QVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQ 280
EI K S L +L +M N + +I+P++S NLQ LNL DN I + S + +
Sbjct: 678 D-EISKVS--KLNKLEMMSNKVRDISPLAS-----LKNLQWLNLSDNKIQDISTLSSMLD 729
Query: 281 IRSLE 285
+ SL+
Sbjct: 730 LLSLK 734
>TIGR_CMR|BA_0552 [details] [associations]
symbol:BA_0552 "internalin, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0009405 "pathogenesis" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF05031 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR006635
PROSITE:PS50978 RefSeq:NP_843087.1 RefSeq:YP_017174.1
RefSeq:YP_026798.1 ProteinModelPortal:Q81YT0
EnsemblBacteria:EBBACT00000010697 EnsemblBacteria:EBBACT00000017841
EnsemblBacteria:EBBACT00000022856 GeneID:1087882 GeneID:2817231
GeneID:2849896 KEGG:ban:BA_0552 KEGG:bar:GBAA_0552 KEGG:bat:BAS0520
HOGENOM:HOG000083246 OMA:GLEYMTN ProtClustDB:CLSK915856
BioCyc:BANT260799:GJAJ-580-MONOMER
BioCyc:BANT261594:GJ7F-607-MONOMER Uniprot:Q81YT0
Length = 1070
Score = 129 (50.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 121 KDKIQDKFSKFEELTSAA-LPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGE 179
K+ I D FS E +T+ L V+ A + + NLK +DL+ N + D K + + +
Sbjct: 559 KEGITD-FSGLEFMTNVEELTLQNVNMKNAEFISSLRNLKSVDLSYNQIEDIKPLHSLED 617
Query: 180 ------------------QLPALAVLNLSNN-LMSKEVTGLPQLKSIRILVLNCTGVNWM 220
++ L L+LSNN L + + G+ QL+++ L++N +N +
Sbjct: 618 LEKLNVSDNGIKNVPELFKMQKLKTLDLSNNKLDNAALDGIHQLENLDALLVNNNEINNL 677
Query: 221 QVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQ 280
EI K S L +L +M N + +I+P++S NLQ LNL DN I + S + +
Sbjct: 678 D-EISKVS--KLNKLEMMSNKVRDISPLAS-----LKNLQWLNLSDNKIQDISTLSSMLD 729
Query: 281 IRSLE 285
+ SL+
Sbjct: 730 LLSLK 734
>UNIPROTKB|Q7Z5L7 [details] [associations]
symbol:PODN "Podocan" species:9606 "Homo sapiens"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IDA]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005518 "collagen binding"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030336
GO:GO:0005518 InterPro:IPR000372 SMART:SM00013 EMBL:AL445183
HSSP:P07359 EMBL:AY313607 EMBL:AY358294 EMBL:AK296649 EMBL:AK299375
EMBL:AK304599 EMBL:BC028292 EMBL:BC030608 IPI:IPI00419440
IPI:IPI00645660 IPI:IPI00908607 IPI:IPI00941131
RefSeq:NP_001186009.1 RefSeq:NP_001186010.1 RefSeq:NP_001186011.1
RefSeq:NP_714914.2 UniGene:Hs.586141 UniGene:Hs.740631
ProteinModelPortal:Q7Z5L7 SMR:Q7Z5L7 STRING:Q7Z5L7
PhosphoSite:Q7Z5L7 DMDM:118573110 PRIDE:Q7Z5L7 DNASU:127435
Ensembl:ENST00000312553 Ensembl:ENST00000371500
Ensembl:ENST00000395871 GeneID:127435 KEGG:hsa:127435
UCSC:uc001cuv.3 UCSC:uc001cuw.3 UCSC:uc010ons.2 CTD:127435
GeneCards:GC01P053527 H-InvDB:HIX0199924 HGNC:HGNC:23174
HPA:HPA013892 MIM:608661 neXtProt:NX_Q7Z5L7 PharmGKB:PA134980106
HOVERGEN:HBG059195 InParanoid:Q7Z5L7 OMA:SGNRLHT OrthoDB:EOG42V8FX
ChiTaRS:PODN GenomeRNAi:127435 NextBio:82095 Bgee:Q7Z5L7
CleanEx:HS_PODN Genevestigator:Q7Z5L7 GermOnline:ENSG00000174348
Uniprot:Q7Z5L7
Length = 613
Score = 126 (49.4 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 63/220 (28%), Positives = 110/220 (50%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LT+ L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 142 FEHLTN--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 196
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ +L+L+ N+++ + KH PAL +LHL N +
Sbjct: 197 YLHNNKLAD--AGLPDNMFNGSSNVEVLILSS---NFLR-HVPKHLPPALYKLHLKNNKL 250
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + +L+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 251 EKIPPGA---FSELSSLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 307
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNNMIED 337
P + + H +A S + + L P ++L LLL +N + +
Sbjct: 308 PRSLVLLHLEKNAIRSVDANVLTPIRSLEYLLLHSNQLRE 347
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 129 (50.5 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 87/334 (26%), Positives = 149/334 (44%)
Query: 71 SFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKI-QDKFS 129
SF++ +LS SL E V+ + E + +SA+ + +S+ DKI ++
Sbjct: 87 SFIQTSSLSHLQSLQE---VKLNN-NELETIPNLGSISANIRQLSLAGNAIDKILPEQLE 142
Query: 130 KFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNL 189
F+ L + L +S + LK L + N +S + G F L VL L
Sbjct: 143 AFQSLETLDLSNNNISELRTAFPPL--QLKYLYINNNRVSSMEP-GYFDNLASTLLVLKL 199
Query: 190 SNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILK-HSLPALEELHLMGNSISEITPV 248
+ N +S + +L ++ L LN + V+ L L AL+ L + N + T +
Sbjct: 200 NRNRISAIPPKMFKLPQLQHLELNRNKIK--NVDGLTFQGLGALKSLKMQRNGV---TKL 254
Query: 249 SSPIVQGFDNLQLLNLEDNCIAEWSEILK--LCQIRSLEQLYLNKNNLNRIYYPNN---- 302
G N+++L L+ N + +EI K L + L +L+L++N +NRI P+
Sbjct: 255 MDGAFWGLSNMEVLQLDHNNL---TEITKGWLYGLLMLRELHLSQNAINRIS-PDAWEFC 310
Query: 303 DTIHEL--VSAHESH--EESYLPFQNLCCLLLGNNMIEDLA--SIDSLDSFPKLMDIRLS 356
+ EL H S + S+L L L +GNN + +A + L S K +D+R +
Sbjct: 311 QKLSELDLTFNHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSL-KTLDLRNN 369
Query: 357 ENPVSDPGRGGISRFAIIARLGKIKILNGSEVNS 390
E + G F+ + RL ++ IL G+ + S
Sbjct: 370 EISWTIEDMSGA--FSGLDRLRQL-ILQGNRIRS 400
>TAIR|locus:2076224 [details] [associations]
symbol:EMB2804 "AT3G10220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0007021 "tubulin complex
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009524 "phragmoplast" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
EMBL:CP002686 GO:GO:0051301 GO:GO:0009790 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0009524
UniGene:At.1532 UniGene:At.71154 UniGene:At.71830 OMA:GKHDGMV
EMBL:AK176183 EMBL:AK176266 IPI:IPI00518736 RefSeq:NP_187633.2
PDB:2KJ6 PDBsum:2KJ6 ProteinModelPortal:Q67Z52 SMR:Q67Z52
STRING:Q67Z52 PRIDE:Q67Z52 EnsemblPlants:AT3G10220.1 GeneID:820184
KEGG:ath:AT3G10220 TAIR:At3g10220 InParanoid:Q67Z52
PhylomeDB:Q67Z52 ProtClustDB:CLSN2690532 EvolutionaryTrace:Q67Z52
Genevestigator:Q67Z52 Uniprot:Q67Z52
Length = 243
Score = 119 (46.9 bits), Expect = 0.00010, P = 0.00010
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYS-GTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
K+G R +R G VKYVG + G W+G+ +D GKHDG + G R+F+ +
Sbjct: 160 KVGDRCQVEPGEKR-GMVKYVGRAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECP-RL 217
Query: 69 SGSFVRVHNLSPGISLPE 86
G VR + G PE
Sbjct: 218 QGGMVRPDKVKVG-DYPE 234
>UNIPROTKB|Q96M69 [details] [associations]
symbol:LRGUK "Leucine-rich repeat and guanylate kinase
domain-containing protein" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR001611 InterPro:IPR008144
InterPro:IPR008145 Pfam:PF00625 PROSITE:PS50052 PROSITE:PS51450
SMART:SM00072 GO:GO:0005524 eggNOG:COG4886 GO:GO:0016301
EMBL:CH236950 EMBL:CH471070 InterPro:IPR025875 Pfam:PF12799
PROSITE:PS00856 EMBL:AK057348 EMBL:BC104897 EMBL:BC104899
IPI:IPI00065364 RefSeq:NP_653249.1 UniGene:Hs.149774 HSSP:Q64520
ProteinModelPortal:Q96M69 SMR:Q96M69 PhosphoSite:Q96M69
DMDM:74732316 PaxDb:Q96M69 PRIDE:Q96M69 DNASU:136332
Ensembl:ENST00000285928 GeneID:136332 KEGG:hsa:136332
UCSC:uc003vrm.1 CTD:136332 GeneCards:GC07P133812 HGNC:HGNC:21964
HPA:HPA021275 HPA:HPA024584 HPA:HPA029505 HPA:HPA029506
neXtProt:NX_Q96M69 PharmGKB:PA162394330 HOGENOM:HOG000113379
HOVERGEN:HBG108326 InParanoid:Q96M69 OMA:IDISILC OrthoDB:EOG4RFKRX
PhylomeDB:Q96M69 GenomeRNAi:136332 NextBio:83586 Bgee:Q96M69
CleanEx:HS_LRGUK Genevestigator:Q96M69 Uniprot:Q96M69
Length = 825
Score = 127 (49.8 bits), Expect = 0.00011, P = 0.00011
Identities = 54/193 (27%), Positives = 95/193 (49%)
Query: 123 KIQDKFSKFEELTSAA-LPYL-GVSSPGANIGTIVT-----NLKELDLTGNLLSDWKDIG 175
K+ +K E+L+ + +PYL +++ N+ T NLK+ D + N +S+ D+
Sbjct: 153 KLDLSANKIEDLSCVSCMPYLLELNASQNNLTTFFNFKPPKNLKKADFSHNQISEICDLS 212
Query: 176 AF---------GEQLPALAVLNLSNNLM-----SKEVTGLPQLKSIRILVLNCTGVNWMQ 221
A+ G ++ ++ L + NNL+ + ++T + L + I +L C N Q
Sbjct: 213 AYHALTKLILDGNEIEEISGLEMCNNLIHLSLANNKITTINGLNKLPIKIL-CLSNN--Q 269
Query: 222 VEILK--HSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLC 279
+E++ L AL+ L L N IS + + + D L+++NLEDN IAE EI +
Sbjct: 270 IEMITGLEDLKALQNLDLSHNQISSLQGL-----ENHDLLEVINLEDNKIAELREIEYIK 324
Query: 280 QIRSLEQLYLNKN 292
+ L L L +N
Sbjct: 325 NLPILRVLNLLEN 337
>UNIPROTKB|F5H270 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0035371 "microtubule plus end" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 GO:GO:0005881 HGNC:HGNC:10461 ChiTaRS:CLIP1
EMBL:AC048338 EMBL:AC127002 EMBL:AC079406 EMBL:AC093016
IPI:IPI01010481 ProteinModelPortal:F5H270 SMR:F5H270
Ensembl:ENST00000535290 ArrayExpress:F5H270 Bgee:F5H270
Uniprot:F5H270
Length = 108
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRY 61
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRY
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRY 108
>UNIPROTKB|Q724D5 [details] [associations]
symbol:LMOf2365_0289 "Leucine rich repeat domain protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 eggNOG:COG4886 EMBL:AE017262
GenomeReviews:AE017262_GR InterPro:IPR025875 Pfam:PF12799
RefSeq:YP_012899.1 ProteinModelPortal:Q724D5 STRING:Q724D5
GeneID:2798892 KEGG:lmf:LMOf2365_0289 PATRIC:20321791
HOGENOM:HOG000086018 OMA:TIRSIKI ProtClustDB:CLSK225143
Uniprot:Q724D5
Length = 361
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 56/228 (24%), Positives = 101/228 (44%)
Query: 138 ALPYLGVSSPGANIGTIVTNLKELDLTGNLLS-DW--KDIGAFGEQLPALAVLNLSNNLM 194
AL + G + T+VT ++LD ++ D+ +D+ E L L ++LS N +
Sbjct: 57 ALAFKVAQELGVSEDTVVTQ-EQLDTIETMVYVDFGVEDLTGM-EYLHNLKFVDLSQNKI 114
Query: 195 SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQ 254
SK + L L + + LN + + L +S P L L L N IS + P +
Sbjct: 115 SK-LENLANLTELETVSLNYNQIT--DITPLMNS-PKLYNLELGVNQISTL-----PSFE 165
Query: 255 GFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHES 314
NL++LNL N + + S + Q+ +L ++ NN++ I + ++ A +
Sbjct: 166 NLTNLRILNLSSNQLKDISALKDTPQLTNLS---ISANNISDISVLSECDNLQVFYAESN 222
Query: 315 HEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSD 362
S P +N L + + + L + P + I++ EN +SD
Sbjct: 223 QLTSIEPLRNKTKLEYFDANFNQIKDVTPLSTIPTIRSIKIEENQISD 270
>UNIPROTKB|F1Q140 [details] [associations]
symbol:PODN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030336 "negative regulation of cell
migration" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005518
"collagen binding" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 InterPro:IPR003591
SMART:SM00369 GO:GO:0030336 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00600000084286 OMA:SGNRLHT EMBL:AAEX03003830
EMBL:AAEX03003831 Ensembl:ENSCAFT00000030455 Uniprot:F1Q140
Length = 594
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 62/216 (28%), Positives = 103/216 (47%)
Query: 131 FEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIG-AFGEQLPALAVLNL 189
FE LT+ YL + + L +D N L+ K G FG++ P L + L
Sbjct: 182 FEHLTNLNYLYLANNKLTLAPRFLPNTLISVDFAANYLT--KIYGLTFGQK-PNLRSVYL 238
Query: 190 SNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N + +
Sbjct: 239 HNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKLEK 292
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--YPN 301
I P + +L+ L L++N + E + ++ SLE L L+ NNL+R+ P
Sbjct: 293 IPPGA---FSELSHLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGLPR 349
Query: 302 NDTI-HELVSAHESHEESYL-PFQNLCCLLLGNNMI 335
+ + H +A S + L P ++L LLL +N +
Sbjct: 350 SLVLLHLEKNAIRSVDADVLTPIRSLEYLLLHSNQL 385
>WB|WBGene00011637 [details] [associations]
symbol:T09A5.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009792 GO:GO:0006898 eggNOG:COG4886 GO:GO:0040011
GO:GO:0040035 EMBL:Z36753 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
HOGENOM:HOG000211189 PIR:T24722 RefSeq:NP_495653.1
ProteinModelPortal:P45969 SMR:P45969 STRING:P45969 PaxDb:P45969
EnsemblMetazoa:T09A5.9.1 EnsemblMetazoa:T09A5.9.2 GeneID:174266
KEGG:cel:CELE_T09A5.9 UCSC:T09A5.9.2 CTD:174266 WormBase:T09A5.9
InParanoid:P45969 OMA:LPNEIEQ NextBio:883295 Uniprot:P45969
Length = 326
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 107 LSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVS--SPGANIGTIVTNLKELDLT 164
L K ++ LV +KI+ K E LT L LG + NIG +V NL EL +
Sbjct: 121 LDKLTKLETLYLVS-NKIE-KIENLEALTQLKLLELGDNRIKKIENIGHLV-NLDELFIG 177
Query: 165 GNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEI 224
N + + + E L L+VL+L N + K + + QL +++ L L+ G+ +I
Sbjct: 178 KNKIRQLEGV----ETLQKLSVLSLPGNRIVK-IENVEQLNNLKELYLSDQGLQ----DI 228
Query: 225 LKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSL 284
H + L L L+ + +EI S V+ ++L DN + +SEI +L +++ L
Sbjct: 229 --HGVEPLTNLLLLDVANNEIKTFSG--VERLESLNDFWANDNKVESFSEIEQLSKLKGL 284
Query: 285 EQLYLNKNNLNRIYYPNNDT 304
+ +YL +N Y+ NDT
Sbjct: 285 QTVYLERNPF---YF--NDT 299
>CGD|CAL0005838 [details] [associations]
symbol:NIP100 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0005869 "dynactin
complex" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0000235 "astral
microtubule" evidence=IEA] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQ 67
S+++GQ V ND IG++KY+G + G W G++ GK++GS+ GV+YF K
Sbjct: 2 SFEIGQSVVVKND---IGSIKYIGTTKFAPGVWYGIELLQPKGKNNGSVQGVKYFDCKED 58
Query: 68 KSGSF 72
+G +
Sbjct: 59 DNGFY 63
>UNIPROTKB|Q5A6R8 [details] [associations]
symbol:NIP100 "Putative uncharacterized protein NIP100"
species:237561 "Candida albicans SC5314" [GO:0000132 "establishment
of mitotic spindle orientation" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQ 67
S+++GQ V ND IG++KY+G + G W G++ GK++GS+ GV+YF K
Sbjct: 2 SFEIGQSVVVKND---IGSIKYIGTTKFAPGVWYGIELLQPKGKNNGSVQGVKYFDCKED 58
Query: 68 KSGSF 72
+G +
Sbjct: 59 DNGFY 63
>RGD|1309965 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000938 Pfam:PF01302 RGD:1309965 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
HOVERGEN:HBG003239 EMBL:DQ447885 IPI:IPI00364093 UniGene:Rn.9550
ProteinModelPortal:Q1W1V7 SMR:Q1W1V7 STRING:Q1W1V7 PRIDE:Q1W1V7
UCSC:RGD:1309965 InParanoid:Q1W1V7 ArrayExpress:Q1W1V7
Genevestigator:Q1W1V7 Uniprot:Q1W1V7
Length = 244
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 3 DCNPESYKLGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVR 60
+ + +G R V + + GTV YVG G W+GV + GK+DGS+NG R
Sbjct: 153 EAQASAISVGSRCEVRAPGQSLHRGTVMYVGLTDFKPGYWVGVRYGEPLGKNDGSVNGKR 212
Query: 61 YFQAKSQKSGSFVRVHNLSPGISLPE 86
YF+ ++ + G+FV+ ++ G PE
Sbjct: 213 YFECQA-RYGAFVKPAAVTVG-DFPE 236
>POMBASE|SPAC27D7.13c [details] [associations]
symbol:ssm4 "dynactin microtubule-binding subunit,
p150-Glued Ssm4" species:4896 "Schizosaccharomyces pombe"
[GO:0000743 "nuclear migration involved in conjugation with
cellular fusion" evidence=IMP] [GO:0000753 "cell morphogenesis
involved in conjugation with cellular fusion" evidence=IGI;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005816 "spindle
pole body" evidence=IDA] [GO:0005869 "dynactin complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule" evidence=IDA]
[GO:0007127 "meiosis I" evidence=IGI] [GO:0007129 "synapsis"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISM]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0030437
"ascospore formation" evidence=IGI] [GO:0030981 "cortical
microtubule cytoskeleton" evidence=IDA] [GO:0030989 "dynein-driven
meiotic oscillatory nuclear movement" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] [GO:0051010
"microtubule plus-end binding" evidence=NAS] InterPro:IPR000938
PomBase:SPAC27D7.13c Pfam:PF01302 EMBL:CU329670 GO:GO:0005816
GO:GO:0034613 GenomeReviews:CU329670_GR GO:GO:0005869 GO:GO:0000753
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0030437 GO:GO:0005881
GO:GO:0051010 GO:GO:0030989 GO:GO:0007131 GO:GO:0000743
GO:GO:0030981 GO:GO:0007129 OrthoDB:EOG4ZGSMC EMBL:AB000269
PIR:T38446 PIR:T38993 RefSeq:NP_594619.1 ProteinModelPortal:O42667
IntAct:O42667 STRING:O42667 EnsemblFungi:SPAC27D7.13c.1
GeneID:2542069 KEGG:spo:SPAC27D7.13c NextBio:20803142
GermOnline:SPAC27D7.13c Uniprot:O42667
Length = 670
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 24 IGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGIS 83
+G V++ G SG WLGV+ G GK+DGS+ G RYF + K G FVR + S +
Sbjct: 16 LGIVRFAGSTDFESGIWLGVELLNGKGKNDGSVKGKRYFSCEKGK-GIFVRACS-SNVMK 73
Query: 84 LPEALRVRYRGESS 97
P ++ R +G +
Sbjct: 74 RPSVVKSRKKGSEN 87
>MGI|MGI:1921604 [details] [associations]
symbol:Lrguk "leucine-rich repeats and guanylate kinase
domain containing" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR008144 InterPro:IPR008145
Pfam:PF00625 PROSITE:PS50052 PROSITE:PS51450 SMART:SM00072
MGI:MGI:1921604 GO:GO:0005524 eggNOG:COG4886 GO:GO:0016301
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097803
HSSP:Q64520 CTD:136332 HOGENOM:HOG000113379 HOVERGEN:HBG108326
OMA:IDISILC OrthoDB:EOG4RFKRX EMBL:AK014976 IPI:IPI00108378
RefSeq:NP_083162.1 UniGene:Mm.127952 ProteinModelPortal:Q9D5S7
SMR:Q9D5S7 PhosphoSite:Q9D5S7 PRIDE:Q9D5S7
Ensembl:ENSMUST00000070189 GeneID:74354 KEGG:mmu:74354
UCSC:uc009bgv.1 InParanoid:Q9D5S7 NextBio:340521 Bgee:Q9D5S7
Genevestigator:Q9D5S7 Uniprot:Q9D5S7
Length = 820
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 56/186 (30%), Positives = 91/186 (48%)
Query: 129 SKFEELTSAA-LPYLGVSSPGAN-IGTIVT-----NLKELDLTGNLLSDWKDIGAFGEQL 181
++ E+L+ + +PYL + N + T NLK++D + NL+S+ D+ A+
Sbjct: 159 NRIEDLSCVSCMPYLLELNASQNKLTTFFNFKPPQNLKKVDFSSNLISEMYDLSAYH--- 215
Query: 182 PALAVLNLSNNLMSKEVTGLPQLKSIRILVL------NCTGVNWMQVEILKHS------L 229
L L L NN + +E+TGL S+ L L G+ + +++L S +
Sbjct: 216 -TLTQLILDNNEI-EEITGLENCISLTHLSLAGNKITTIKGLGTLPIKVLSLSNNMIETI 273
Query: 230 PALEELHLMGNSISEITPVSSPIVQGFDN---LQLLNLEDNCIAEWSEILKLCQIRSLEQ 286
LEEL + N +SS +QG +N L+++NLEDN I E SEI + + L
Sbjct: 274 TGLEELKALQNLDLSHNQISS--LQGLENHDLLEVINLEDNKIKELSEIEYIENLPILRV 331
Query: 287 LYLNKN 292
L L +N
Sbjct: 332 LNLLRN 337
>UNIPROTKB|J3QQQ2 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PROSITE:PS51450
InterPro:IPR003591 SMART:SM00369 PANTHER:PTHR11977
InterPro:IPR025875 Pfam:PF12799 EMBL:AC127537 HGNC:HGNC:3750
ChiTaRS:FLII Ensembl:ENST00000488932 Uniprot:J3QQQ2
Length = 279
Score = 119 (46.9 bits), Expect = 0.00014, P = 0.00014
Identities = 59/222 (26%), Positives = 103/222 (46%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNL-----SNNLMSKEVTGLPQLKSIRI 209
+ +L+ L L GN L + A QLPA+ L + S T L L ++
Sbjct: 56 LVHLQTLVLNGNPL-----LHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLAD 110
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
+ L+C + + E L ++LP+L L+L N I+E+ S + + +++ LNL N +
Sbjct: 111 VDLSCNDLTRVP-ECL-YTLPSLRRLNLSSNQITEL----SLCIDQWVHVETLNLSRNQL 164
Query: 270 AEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN----DTIHELVSAHESHE---ESYLPF 322
+ C++ L++LYLN N L+ P+ + E ++A+ + E ES
Sbjct: 165 TSLPSAI--CKLSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMAANNNLELVPESLCRC 222
Query: 323 QNLCCLLLGNNMIEDLA-SIDSLDSFPKLMDIRLSENPVSDP 363
L L+L N + L +I L +++D+R + N V P
Sbjct: 223 PKLRKLVLNKNHLVTLPEAIHFLTEI-EVLDVRENPNLVMPP 263
>UNIPROTKB|J9P0I9 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000938
InterPro:IPR004827 SMART:SM00338 Pfam:PF01302 GO:GO:0043565
GO:GO:0003700 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03004228 EMBL:AAEX03004229 EMBL:AAEX03004230
Ensembl:ENSCAFT00000048444 Uniprot:J9P0I9
Length = 702
Score = 125 (49.1 bits), Expect = 0.00015, P = 0.00015
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K
Sbjct: 223 RLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KF 279
Query: 70 GSFVRVHNL 78
G F +H +
Sbjct: 280 GLFAPIHKV 288
Score = 118 (46.6 bits), Expect = 0.00086, P = 0.00086
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 9 YKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
+ +G+RV N + G V+Y+GE Q G W GV D GK+DG++ GVRYF+ + +
Sbjct: 82 FAVGERVW-VNGVKP-GVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGVRYFECPALQ 139
Query: 69 SGSFVRVHNLS 79
G F R L+
Sbjct: 140 -GIFTRPSKLT 149
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 74/295 (25%), Positives = 130/295 (44%)
Query: 73 VRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELV----G-KDKIQDK 127
V +H L G+ PE + + G +D M L + EL+ G D Q
Sbjct: 11 VLIH-LYCGVCCPEPCQC-FSGSKLVCSDDRMKSLPVNISTQVRELIVVASGIPDLDQQS 68
Query: 128 FSKFEELTSAALPYLG--VSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALA 185
F E L + L +L + S + L+EL+++GN+ DI F L L
Sbjct: 69 FP--ETLRLSKLVFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSS-LTNLT 125
Query: 186 VLNLSNNLMSKEVTGL-PQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
L L+NN +S GL L + +L L G++++ + + L L+EL L N IS
Sbjct: 126 RLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQR-LHRLQELDLSFNQISS 184
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN-- 302
+ S+ + Q L++L+L+ N I + + + L++L L ++NL R+ P +
Sbjct: 185 L---STELFQNNSELRVLSLQANKIPNLPDGI-FTHLDHLQELNL-RSNLIRVLTPGSFP 239
Query: 303 ----------DTIHELVSA--HESHEESYLPFQNLCCLLLGNNMIEDLASIDSLD 345
+ + +L +A H H +YL + ++ ++L S+++LD
Sbjct: 240 ASLKTLILKKNLLEKLTNAVFHTLHYITYLDLSQNSLTEVPADLFQNLISLETLD 294
>FB|FBgn0020503 [details] [associations]
symbol:CLIP-190 "Cytoplasmic linker protein 190" species:7227
"Drosophila melanogaster" [GO:0008017 "microtubule binding"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=ISS;IDA] [GO:0003779 "actin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007349 "cellularization" evidence=IMP] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0045169 "fusome"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=IDA]
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005794 GO:GO:0005875 GO:GO:0003779 GO:GO:0000776
EMBL:AE014134 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007017
GO:GO:0051010 GO:GO:0005876 GO:GO:0007349 GO:GO:0045169
EMBL:AF041382 EMBL:AY118896 EMBL:BT011136 PIR:T13030
RefSeq:NP_001162996.1 RefSeq:NP_609835.2 RefSeq:NP_724047.2
RefSeq:NP_724048.1 UniGene:Dm.3487 ProteinModelPortal:Q9VJE5
SMR:Q9VJE5 DIP:DIP-21005N IntAct:Q9VJE5 MINT:MINT-764195
STRING:Q9VJE5 PaxDb:Q9VJE5 PRIDE:Q9VJE5 EnsemblMetazoa:FBtr0080976
EnsemblMetazoa:FBtr0332456 GeneID:35042 KEGG:dme:Dmel_CG5020
CTD:35042 FlyBase:FBgn0020503 GeneTree:ENSGT00700000104055
InParanoid:Q9VJE5 OMA:REEQNKF OrthoDB:EOG40RXWH PhylomeDB:Q9VJE5
ChiTaRS:CLIP-190 GenomeRNAi:35042 NextBio:791511 Bgee:Q9VJE5
GermOnline:CG5020 Uniprot:Q9VJE5
Length = 1690
Score = 134 (52.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 11 LGQRVH-SANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+G RV S+ R G ++Y+GE Q G W GV+ D +GK+DG+++ +RYF+ K K
Sbjct: 239 VGDRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKP-KY 297
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKE 99
G FV + +S +S P + + R S+E
Sbjct: 298 GVFVPIAKVS--LS-PSSKKTRLSRTGSRE 324
Score = 129 (50.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 5 NPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQA 64
N E + +GQRV R G + ++G+ +G W GV D NGK+DG ++G RYFQ
Sbjct: 119 NTEQFIIGQRVWLGGT--RPGQIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQC 176
Query: 65 KSQKSGSFVRVHNLS 79
+ K G F R+ L+
Sbjct: 177 EP-KRGIFSRLTRLT 190
Score = 42 (19.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 95 ESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFE 132
E + E+ Y L+ + ELV KD+ +KFS E
Sbjct: 514 EEQRLRENVKY-LNEQIATLQSELVSKDEALEKFSLSE 550
Score = 39 (18.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 119 VGKDKIQDKFSKFEELTSA 137
V K+KI D SK +L SA
Sbjct: 449 VYKEKIHDLESKITKLVSA 467
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 64/235 (27%), Positives = 105/235 (44%)
Query: 142 LGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNN--LMSKEVT 199
L SPGA +G + NL L L N L + E LP L +L L +N L K++
Sbjct: 152 LSAISPGAFVG--LHNLLRLHLNSNRLQMINS--KWFEALPNLEILMLGDNPILRIKDMN 207
Query: 200 GLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNL 259
P LK +R LV+ G+N E+ +L LE L + + + V +Q NL
Sbjct: 208 FQPLLK-LRSLVI--AGINL--TEVPDDALVGLENLESISFYDNRLNKVPQVALQKAVNL 262
Query: 260 QLLNLEDNCI-----AEWSEILKLCQIR--------SLEQLYL-NKNNLNRIYYPNNDTI 305
+ L+L N I ++S +L L ++ S++ L + N +L +I NN +
Sbjct: 263 KFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRL 322
Query: 306 HELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPV 360
+ H ++ L L+L +N + L +++S P L +I + NP+
Sbjct: 323 SYI------HPNAFFRLPKLESLMLNSNALSALYH-GTIESLPNLKEISIHSNPI 370
>ZFIN|ZDB-GENE-061103-403 [details] [associations]
symbol:erbb2ip "erbb2 interacting protein"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00595 InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 ZFIN:ZDB-GENE-061103-403
SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00650000093182 EMBL:BX640501 EMBL:CR854840
EMBL:CR925725 IPI:IPI00829181 Ensembl:ENSDART00000129441
Uniprot:E7EYJ7
Length = 1384
Score = 127 (49.8 bits), Expect = 0.00020, P = 0.00020
Identities = 67/238 (28%), Positives = 114/238 (47%)
Query: 142 LGVSSPGANIGTIVTNLKELDLTGNLLSDW-KDIGAFGEQLPALAVLNLSNNLMSKEVTG 200
L V PG I ++ NL+ELD++ N + ++ ++I + LA++ S N +SK G
Sbjct: 81 LTVLPPG--IANLI-NLRELDVSKNGIQEFPENI----KNCKVLAIVEASVNPISKLPEG 133
Query: 201 LPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQ 260
QL S+ L LN + ++ + L L+ L L N + ++ P S + L+
Sbjct: 134 FTQLLSLSQLYLNDAFLEFLPASFGR--LTKLQILELRENQL-KMLPKS---MHKLTQLE 187
Query: 261 LLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN-DTIHEL----VSAH--E 313
L+L N E E+L+ Q+ + +L+++ N L + P + +L VS + E
Sbjct: 188 RLDLGSNEFTEVPEVLE--QLTGIRELWMDGNKLT--FVPGMIGALKQLSYLDVSKNNVE 243
Query: 314 SHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSD-PGR-GGIS 369
EE +NL LLL NN + L S+ S KL +++ +N + P GG+S
Sbjct: 244 MVEEQISGCENLQDLLLSNNALTQLPG--SIGSLKKLSTLKVDDNQLMYLPDTIGGLS 299
>UNIPROTKB|E1BRU5 [details] [associations]
symbol:E1BRU5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005178 "integrin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006605 "protein targeting" evidence=IEA]
[GO:0016323 "basolateral plasma membrane" evidence=IEA] [GO:0030056
"hemidesmosome" evidence=IEA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
GO:GO:0005634 GO:GO:0005737 GO:GO:0006605 GO:GO:0016323
SUPFAM:SSF50156 InterPro:IPR025875 Pfam:PF12799 GO:GO:0030056
GeneTree:ENSGT00650000093182 OMA:HNNVRAN EMBL:AADN02045981
EMBL:AADN02045982 EMBL:AADN02045983 EMBL:AADN02045984
EMBL:AADN02045985 EMBL:AADN02045986 EMBL:AADN02045987 EMBL:AC145935
IPI:IPI00819393 ProteinModelPortal:E1BRU5
Ensembl:ENSGALT00000038678 ArrayExpress:E1BRU5 Uniprot:E1BRU5
Length = 1403
Score = 127 (49.8 bits), Expect = 0.00021, P = 0.00021
Identities = 63/271 (23%), Positives = 130/271 (47%)
Query: 96 SSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIV 155
S ++ E++ + + + ++ +++ + + L +LP +++ A+I ++
Sbjct: 33 SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLI 92
Query: 156 TNLKELDLTGNLLSDW-KDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
NL+ELD++ N + ++ ++I + L V+ S N +SK G QL ++ L LN
Sbjct: 93 -NLRELDVSKNGIQEFPENI----KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLND 147
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ ++ + L L+ L L N + + S + Q L+ L+L N E E
Sbjct: 148 AFLEFLPANFGR--LTKLQILELRENQLKILPKTMSRLTQ----LERLDLGSNEFTEVPE 201
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIYYPNN-DTIHEL----VSAH--ESHEESYLPFQNLCC 327
+L+ Q+ L++ +++ N L I P T+ +L VS + E EE ++L
Sbjct: 202 VLE--QLSGLKEFWMDGNRLTLI--PGFIGTLKQLTYLDVSKNNIEIVEEGISGCESLQD 257
Query: 328 LLLGNNMIEDLASIDSLDSFPKLMDIRLSEN 358
LLL +N ++ L +++ S K+ +++ EN
Sbjct: 258 LLLSSNSLQQLP--ETIGSLKKVTTLKIDEN 286
>ZFIN|ZDB-GENE-040718-372 [details] [associations]
symbol:lrrc57 "leucine rich repeat containing 57"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040718-372
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116557
GeneTree:ENSGT00700000104417 EMBL:BC075955 IPI:IPI00511290
RefSeq:NP_001002627.1 UniGene:Dr.84455 ProteinModelPortal:Q6DHL5
STRING:Q6DHL5 PRIDE:Q6DHL5 Ensembl:ENSDART00000064515
Ensembl:ENSDART00000114270 GeneID:436900 KEGG:dre:436900 CTD:255252
HOVERGEN:HBG054710 InParanoid:Q6DHL5 OMA:ERYTATK OrthoDB:EOG4F1X40
NextBio:20831327 Bgee:Q6DHL5 Uniprot:Q6DHL5
Length = 238
Score = 116 (45.9 bits), Expect = 0.00021, P = 0.00021
Identities = 49/182 (26%), Positives = 89/182 (48%)
Query: 94 GESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGT 153
G+ E +++ L+A+ + V + +++ F+ L S + ++S +IG
Sbjct: 23 GKGLTEFPEDLQKLTANLRTVDLSNNKIEELPAFIGSFQHLKSFTISCNKLTSLPNDIGK 82
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLN 213
+ L+ L L GN L K + + QL +L L+LS N + +GL L+ + +L L+
Sbjct: 83 L-KKLETLILNGNQL---KQLPSSIGQLKSLRTLSLSGNQFKEFPSGLGTLRQLDVLDLS 138
Query: 214 CTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWS 273
+ + E+ + L A+E ++L N IS +T V L++L LE+NC+ E S
Sbjct: 139 KNQIRVVPAEVAE--LQAIE-INLNQNQISSVTQE----VSRTPRLKVLRLEENCL-ELS 190
Query: 274 EI 275
I
Sbjct: 191 SI 192
>UNIPROTKB|E1BQI8 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:AADN02026009
IPI:IPI00579643 Ensembl:ENSGALT00000001972 Uniprot:E1BQI8
Length = 1040
Score = 125 (49.1 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K
Sbjct: 211 RLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KF 267
Query: 70 GSFVRVHNL 78
G F +H +
Sbjct: 268 GLFAPIHKV 276
Score = 46 (21.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 88 LRVRYRGESSKEEEDEMYVLSASNKHVSIELVG-KDKIQ 125
L+ +Y ++ K+ + EM L A N+ S E+V K K+Q
Sbjct: 557 LKEKYE-KTLKKYQQEMEKLKAVNEKYSQEIVDLKHKVQ 594
>MGI|MGI:1342286 [details] [associations]
symbol:Flii "flightless I homolog (Drosophila)"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=TAS] [GO:0030054 "cell junction" evidence=IEA] [GO:0051014
"actin filament severing" evidence=TAS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 MGI:MGI:1342286 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0030036 eggNOG:COG4886 GO:GO:0006351 GO:GO:0005925
GO:GO:0051014 InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 EMBL:AL596215 CleanEx:MM_FLI1
GeneTree:ENSGT00660000095502 HOGENOM:HOG000016110 OMA:MEEWNED
CTD:2314 HOVERGEN:HBG051627 OrthoDB:EOG4TB49G ChiTaRS:FLII
EMBL:AF142329 EMBL:AF287264 EMBL:BC027744 EMBL:BC032282
IPI:IPI00467104 RefSeq:NP_071292.1 UniGene:Mm.339755
ProteinModelPortal:Q9JJ28 SMR:Q9JJ28 DIP:DIP-47641N
MINT:MINT-4095146 STRING:Q9JJ28 PhosphoSite:Q9JJ28 PaxDb:Q9JJ28
PRIDE:Q9JJ28 Ensembl:ENSMUST00000002889 GeneID:14248 KEGG:mmu:14248
UCSC:uc007jgh.1 InParanoid:Q9JJ28 NextBio:285565 Bgee:Q9JJ28
CleanEx:MM_FLII Genevestigator:Q9JJ28 GermOnline:ENSMUSG00000002812
Uniprot:Q9JJ28
Length = 1271
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 64/221 (28%), Positives = 109/221 (49%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPA---LAVLNLSNN--LMSKEVTGLPQLKSIRI 209
+ +L+ L L GN L + A QLPA L L+L N S T L L ++
Sbjct: 173 LVHLQTLVLNGNPL-----LHAQLRQLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSD 227
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
+ L+C + + E L ++LP+L L+L N I+E+ S + + +L+ LNL N +
Sbjct: 228 VDLSCNDLTRVP-ECL-YTLPSLRRLNLSSNQIAEL----SLCIDQWVHLETLNLSRNQL 281
Query: 270 AEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN----DTIHELVSAHESHEESYLPFQNL 325
+ C++ L++LYLN N L+ P+ ++ E ++A+ + E +P ++L
Sbjct: 282 TSLPSAI--CKLTKLKKLYLNSNKLDFDGLPSGIGKLTSLEEFMAANNNLE--LIP-ESL 336
Query: 326 C-C-----LLLGNNMIEDLA-SIDSLDSFPKLMDIRLSENP 359
C C L+L N + L +I L +++D+R ENP
Sbjct: 337 CRCPKLKKLVLNKNRLVTLPEAIHFLTEI-QVLDVR--ENP 374
>UNIPROTKB|Q9UDT6 [details] [associations]
symbol:CLIP2 "CAP-Gly domain-containing linker protein 2"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=TAS] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881 Orphanet:904
HOGENOM:HOG000092755 HOVERGEN:HBG007123 EMBL:AB006629 EMBL:AC005015
EMBL:AF041059 EMBL:AF041055 EMBL:AF041056 EMBL:AF041057
EMBL:AF041058 IPI:IPI00019642 IPI:IPI00246616 RefSeq:NP_003379.3
RefSeq:NP_115797.1 UniGene:Hs.647018 PDB:2CP2 PDB:2CP3 PDBsum:2CP2
PDBsum:2CP3 ProteinModelPortal:Q9UDT6 SMR:Q9UDT6 IntAct:Q9UDT6
STRING:Q9UDT6 PhosphoSite:Q9UDT6 DMDM:74753268 PaxDb:Q9UDT6
PRIDE:Q9UDT6 DNASU:7461 Ensembl:ENST00000223398
Ensembl:ENST00000361545 Ensembl:ENST00000395060
Ensembl:ENST00000573159 Ensembl:ENST00000575290
Ensembl:ENST00000575893 GeneID:7461 KEGG:hsa:7461 UCSC:uc003uam.3
CTD:7461 GeneCards:GC07P073703 HGNC:HGNC:2586 HPA:CAB020767
HPA:HPA020430 MIM:603432 neXtProt:NX_Q9UDT6 PharmGKB:PA27085
KO:K10422 OMA:HWRAQLE PhylomeDB:Q9UDT6 ChiTaRS:CLIP2
EvolutionaryTrace:Q9UDT6 GenomeRNAi:7461 NextBio:29216
ArrayExpress:Q9UDT6 Bgee:Q9UDT6 CleanEx:HS_CLIP2
Genevestigator:Q9UDT6 GermOnline:ENSG00000106665 Uniprot:Q9UDT6
Length = 1046
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K
Sbjct: 220 RLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KF 276
Query: 70 GSFVRVHNL 78
G F +H +
Sbjct: 277 GLFAPIHKV 285
>ZFIN|ZDB-GENE-041010-153 [details] [associations]
symbol:lrrc23 "leucine rich repeat containing 23"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-041010-153 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 CTD:10233 HOVERGEN:HBG052867
EMBL:BC083278 IPI:IPI00512598 RefSeq:NP_001006054.1
UniGene:Dr.26041 ProteinModelPortal:Q5XJM1 GeneID:450033
KEGG:dre:450033 InParanoid:Q5XJM1 NextBio:20833016
ArrayExpress:Q5XJM1 Uniprot:Q5XJM1
Length = 326
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 58/212 (27%), Positives = 98/212 (46%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
+L+ LDL+ N LSD+ + QL L V SN L E QL ++ L +
Sbjct: 83 HLRYLDLSSNHLSDFSPLAGL-TQL--LWVKGDSNLLQGFEGQPFGQLTFLQWLSIASNR 139
Query: 217 VNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEIL 276
+ ++ PALE L+L GN I + + P NL L L NC+ E ++ +
Sbjct: 140 L----FDVTGLGGPALETLNLTGNGIQTMQGLDHP---NLTNLVTLELRGNCL-ETTDGI 191
Query: 277 KLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEE-SYLP--FQNLCCLLLGN- 332
L +R LYL +NN+ ++ + + L++ H H + L ++ CL N
Sbjct: 192 YLPNLR---HLYLAQNNIKKL--EGLEKLERLITLHLRHNQLETLDGLSASMKCLEYLNV 246
Query: 333 --NMIEDLASIDSLDSFPK-LMDIRLSENPVS 361
N+I + ++ +L S + L + L +NP++
Sbjct: 247 RGNLISSMRALQTLASVGQTLKALVLLDNPIA 278
>MGI|MGI:109347 [details] [associations]
symbol:Lum "lumican" species:10090 "Mus musculus" [GO:0005518
"collagen binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO;IDA] [GO:0005583 "fibrillar collagen" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR001611 InterPro:IPR027219
PROSITE:PS51450 MGI:MGI:109347 GO:GO:0005615 GO:GO:0005578
GO:GO:0045944 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0014070 GO:GO:0051216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0070848 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:S79461 EMBL:AF013262 EMBL:AK014312
EMBL:AK075737 EMBL:AK164774 EMBL:BC005550 IPI:IPI00313900
RefSeq:NP_032550.2 UniGene:Mm.18888 ProteinModelPortal:P51885
SMR:P51885 STRING:P51885 PhosphoSite:P51885 PaxDb:P51885
PRIDE:P51885 Ensembl:ENSMUST00000038160 GeneID:17022 KEGG:mmu:17022
UCSC:uc007gwz.2 InParanoid:P51885 NextBio:291134 Bgee:P51885
CleanEx:MM_LUM Genevestigator:P51885 GermOnline:ENSMUSG00000036446
Uniprot:P51885
Length = 338
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 61/218 (27%), Positives = 100/218 (45%)
Query: 118 LVGKDKIQDK-FSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGA 176
L+ KI+ K FSK ++L + Y ++ ++G + +L++L LT N +S +G+
Sbjct: 101 LLENSKIKGKVFSKLKQLKKLHINYNNLTE---SVGPLPKSLQDLQLTNNKISK---LGS 154
Query: 177 FGEQLPALAVLNLSNNLMSKEVTG--LPQLKSIRILVLNCTGVNWMQVEILKHSLP-ALE 233
F + L L + L +N + ++ L LKS+ L L+ + Q+ L LP +L
Sbjct: 155 F-DGLVNLTFIYLQHNQLKEDAVSASLKGLKSLEYLDLS-----FNQMSKLPAGLPTSLL 208
Query: 234 ELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
L+L N IS I P + F LQ L L N +A+ I SL +L L+ N
Sbjct: 209 TLYLDNNKISNI-P--DEYFKRFTGLQYLRLSHNELADSGVPGNSFNISSLLELDLSYNK 265
Query: 294 LNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLG 331
L I N + + + +E + F C +LG
Sbjct: 266 LKSIPTVNENLENYYLEVNELEKFDVKSF----CKILG 299
>SGD|S000001676 [details] [associations]
symbol:SDS22 "Regulatory subunit of the type 1 protein
phosphatase (PP1) Glc7p" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0071862 "protein
phosphatase type 1 activator activity" evidence=IGI] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0051457 "maintenance of
protein location in nucleus" evidence=IMP] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0004865 "protein serine/threonine phosphatase inhibitor
activity" evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
SGD:S000001676 GO:GO:0005634 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 eggNOG:COG4886 EMBL:BK006944 EMBL:X69765
InterPro:IPR025875 Pfam:PF12799 GO:GO:0051457 GO:GO:0000164
GO:GO:0004865 GeneTree:ENSGT00670000097777 GO:GO:0071862
HOGENOM:HOG000211189 OrthoDB:EOG4B01ZB EMBL:X83609 EMBL:Z28193
EMBL:AY558314 PIR:S38030 RefSeq:NP_012728.1
ProteinModelPortal:P36047 SMR:P36047 DIP:DIP-2378N IntAct:P36047
MINT:MINT-641828 STRING:P36047 PaxDb:P36047 PeptideAtlas:P36047
EnsemblFungi:YKL193C GeneID:853641 KEGG:sce:YKL193C CYGD:YKL193c
OMA:CEIDFEG NextBio:974534 Genevestigator:P36047 GermOnline:YKL193C
Uniprot:P36047
Length = 338
Score = 118 (46.6 bits), Expect = 0.00028, P = 0.00028
Identities = 58/217 (26%), Positives = 105/217 (48%)
Query: 149 ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIR 208
+N+ + T L LDL+ N + K++ E L L L N +SK + L LKS++
Sbjct: 107 SNVNKL-TKLTSLDLSFNKIKHIKNL----ENLTDLENLYFVQNSISK-IENLSTLKSLK 160
Query: 209 ILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNC 268
L L V+ ++ + + L LEE+ L NSI + + P+ NL++L+++ N
Sbjct: 161 NLELGGNKVHSIEPDSFE-GLSNLEEIWLGKNSIPRLINLH-PL----KNLKILSIQSNK 214
Query: 269 IAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND---TIHELVSAHESHEESYLPFQNL 325
+ +I L ++ +LE+LYL+ N + +I + T ++ S + E+ NL
Sbjct: 215 L---KKIENLEELTNLEELYLSHNFITKIEGLEKNLKLTTLDVTSNKITSLENLNHLSNL 271
Query: 326 CCLLLGNNMIED-LASI-DSLDSFPKLMDIRLSENPV 360
+ N I+ S+ ++L + +L I L NP+
Sbjct: 272 TDIWASFNKIDQSFESLGENLSALSRLETIYLEGNPI 308
>UNIPROTKB|E1BGH3 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:DAAA02058193
IPI:IPI00716251 Ensembl:ENSBTAT00000015759 Uniprot:E1BGH3
Length = 1047
Score = 125 (49.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K
Sbjct: 219 RLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KF 275
Query: 70 GSFVRVHNL 78
G F +H +
Sbjct: 276 GLFAPIHKV 284
Score = 45 (20.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 86 EALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDK 127
E L V Y+G++ E + + A K + EL+ + + Q K
Sbjct: 735 EKLDVEYQGQAQAIEFLKEQISLAEKKMLDYELLQRSEAQSK 776
>UNIPROTKB|F1PUU4 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 EMBL:AAEX03003715
Ensembl:ENSCAFT00000029049 Uniprot:F1PUU4
Length = 1273
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 64/221 (28%), Positives = 109/221 (49%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL---NLSNN--LMSKEVTGLPQLKSIRI 209
+ +L+ L L GN L + A QLPAL L +L N S T L L ++
Sbjct: 173 LVHLQTLVLNGNPL-----LHAQLRQLPALMALQTLHLRNTQRTQSNLPTSLEGLSNLAD 227
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
+ L+C + + E L ++LP+L L+L N ISE+ S + + +++ LNL N +
Sbjct: 228 VDLSCNDLTRVP-ECL-YTLPSLRRLNLSSNQISEL----SLCIDQWVHVETLNLSRNQL 281
Query: 270 AEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN----DTIHELVSAHESHEESYLPFQNL 325
+ C++ L++LYLN N L+ P+ ++ E ++A+ + E +P ++L
Sbjct: 282 TSLPSAI--CKLTKLKKLYLNSNKLDFDGLPSGIGKLASLEEFMAANNNLE--LIP-ESL 336
Query: 326 C-C-----LLLGNNMIEDLA-SIDSLDSFPKLMDIRLSENP 359
C C L+L N + L +I L +++D+R ENP
Sbjct: 337 CRCTKLRKLVLNKNRLVTLPEAIHFLTEI-EVLDVR--ENP 374
>UNIPROTKB|J9P2Y3 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 OMA:MEEWNED CTD:2314 EMBL:AAEX03003715
RefSeq:XP_536659.4 Ensembl:ENSCAFT00000047161 GeneID:479521
KEGG:cfa:479521 Uniprot:J9P2Y3
Length = 1278
Score = 125 (49.1 bits), Expect = 0.00031, P = 0.00031
Identities = 64/221 (28%), Positives = 109/221 (49%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL---NLSNN--LMSKEVTGLPQLKSIRI 209
+ +L+ L L GN L + A QLPAL L +L N S T L L ++
Sbjct: 178 LVHLQTLVLNGNPL-----LHAQLRQLPALMALQTLHLRNTQRTQSNLPTSLEGLSNLAD 232
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
+ L+C + + E L ++LP+L L+L N ISE+ S + + +++ LNL N +
Sbjct: 233 VDLSCNDLTRVP-ECL-YTLPSLRRLNLSSNQISEL----SLCIDQWVHVETLNLSRNQL 286
Query: 270 AEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN----DTIHELVSAHESHEESYLPFQNL 325
+ C++ L++LYLN N L+ P+ ++ E ++A+ + E +P ++L
Sbjct: 287 TSLPSAI--CKLTKLKKLYLNSNKLDFDGLPSGIGKLASLEEFMAANNNLE--LIP-ESL 341
Query: 326 C-C-----LLLGNNMIEDLA-SIDSLDSFPKLMDIRLSENP 359
C C L+L N + L +I L +++D+R ENP
Sbjct: 342 CRCTKLRKLVLNKNRLVTLPEAIHFLTEI-EVLDVR--ENP 379
>WB|WBGene00022789 [details] [associations]
symbol:lron-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00700000104056 OMA:AMIKIGQ HSSP:P07359 EMBL:FO081193
PIR:T29972 RefSeq:NP_505402.1 ProteinModelPortal:Q23580 SMR:Q23580
STRING:Q23580 PaxDb:Q23580 EnsemblMetazoa:ZK682.5 GeneID:179309
KEGG:cel:CELE_ZK682.5 UCSC:ZK682.5 CTD:179309 WormBase:ZK682.5
eggNOG:NOG280691 HOGENOM:HOG000021591 InParanoid:Q23580
NextBio:904832 Uniprot:Q23580
Length = 575
Score = 121 (47.7 bits), Expect = 0.00031, P = 0.00031
Identities = 45/152 (29%), Positives = 71/152 (46%)
Query: 149 ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLS-NNLMSKEVTGLPQLKSI 207
AN T L+ L L N L + D G L +L L+L+ NNL TG+P+L+++
Sbjct: 76 ANAFQSFTILR-LVLNRNTLQNIDDQAFNGPLLDSLIELDLNDNNLGQIPQTGIPRLRNL 134
Query: 208 RILVLNCTGVNWMQVEILK--HSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLE 265
R L LN +N + S L +L L GN +++ T + + + LQ L+LE
Sbjct: 135 RKLYLNRNRINQLSSTAFNAFESRDLLLKLELAGNRLTDATLGDATVFRPLTLLQELSLE 194
Query: 266 DNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI 297
N + + Q +L L L N++N +
Sbjct: 195 TNSLTSIPSSALVNQRNTLTNLNLGLNSINEV 226
>UNIPROTKB|E7EQW9 [details] [associations]
symbol:ERBB2IP "Protein LAP2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IDA] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 GO:GO:0005886 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 EMBL:AC010359 EMBL:AC025442
RefSeq:NP_001240630.1 UniGene:Hs.597241 UniGene:Hs.731734
UniGene:Hs.740465 GeneID:55914 KEGG:hsa:55914 CTD:55914
HGNC:HGNC:15842 KO:K12796 ChiTaRS:ERBB2IP GenomeRNAi:55914
IPI:IPI00966557 ProteinModelPortal:E7EQW9 SMR:E7EQW9
Ensembl:ENST00000511297 UCSC:uc003jul.2 ArrayExpress:E7EQW9
Bgee:E7EQW9 Uniprot:E7EQW9
Length = 1367
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 59/269 (21%), Positives = 128/269 (47%)
Query: 96 SSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIV 155
S ++ E++ + + + ++ +++ + + L +LP +++ A+I ++
Sbjct: 33 SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLI 92
Query: 156 TNLKELDLTGNLLSDW-KDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
NL+ELD++ N + ++ ++I + L ++ S N +SK G QL ++ L LN
Sbjct: 93 -NLRELDVSKNGIQEFPENI----KNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLND 147
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ ++ + L L+ L L N + + + + Q L+ L+L N E E
Sbjct: 148 AFLEFLPANFGR--LTKLQILELRENQLKMLPKTMNRLTQ----LERLDLGSNEFTEVPE 201
Query: 275 ILKLCQIRSLEQLYLNKNNLNRI--YYPNNDTIHEL-VSAH--ESHEESYLPFQNLCCLL 329
+L+ Q+ L++ +++ N L I + + + L VS + E EE +NL LL
Sbjct: 202 VLE--QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLL 259
Query: 330 LGNNMIEDLASIDSLDSFPKLMDIRLSEN 358
L +N ++ L +++ S + +++ EN
Sbjct: 260 LSSNSLQQLP--ETIGSLKNITTLKIDEN 286
>UNIPROTKB|Q96RT1 [details] [associations]
symbol:ERBB2IP "Protein LAP2" species:9606 "Homo sapiens"
[GO:0006605 "protein targeting" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005200 "structural constituent of
cytoskeleton" evidence=NAS] [GO:0007155 "cell adhesion"
evidence=NAS] [GO:0030056 "hemidesmosome" evidence=IDA] [GO:0005178
"integrin binding" evidence=IPI] [GO:0016049 "cell growth"
evidence=NAS] [GO:0007049 "cell cycle" evidence=NAS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045175 "basal
protein localization" evidence=NAS] [GO:0045197 "establishment or
maintenance of epithelial cell apical/basal polarity" evidence=NAS]
[GO:0009925 "basal plasma membrane" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0045104 "intermediate filament
cytoskeleton organization" evidence=NAS] [GO:0007229
"integrin-mediated signaling pathway" evidence=NAS] [GO:0005176
"ErbB-2 class receptor binding" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA;TAS] Pfam:PF00595
InterPro:IPR001611 InterPro:IPR001478 PROSITE:PS50106
PROSITE:PS51450 SMART:SM00228 GO:GO:0005634 GO:GO:0005737
GO:GO:0006605 Reactome:REACT_111102 GO:GO:0007173 GO:GO:0005200
GO:GO:0016049 GO:GO:0031965 eggNOG:COG4886 GO:GO:0007155
GO:GO:0007049 GO:GO:0007229 SUPFAM:SSF50156 GO:GO:0005604
InterPro:IPR025875 Pfam:PF12799 GO:GO:0009925 GO:GO:0030056
GO:GO:0045104 GO:GO:0005176 GO:GO:0045197 GO:GO:0045175 PDB:1MFG
PDB:1MFL PDBsum:1MFG PDBsum:1MFL EMBL:AF263744 EMBL:AF276423
EMBL:AB033051 EMBL:AK001180 EMBL:AK304693 EMBL:AC010359
EMBL:AC025442 EMBL:BC050692 EMBL:BC115012 EMBL:BC126464
EMBL:BC144075 IPI:IPI00438286 IPI:IPI00438287 IPI:IPI00438288
IPI:IPI00438289 IPI:IPI00438290 IPI:IPI00438291 IPI:IPI00438292
RefSeq:NP_001006600.1 RefSeq:NP_001240626.1 RefSeq:NP_001240627.1
RefSeq:NP_001240628.1 RefSeq:NP_001240630.1 RefSeq:NP_061165.1
UniGene:Hs.597241 UniGene:Hs.731734 UniGene:Hs.740465 PDB:1N7T
PDB:2H3L PDB:2QBW PDB:3CH8 PDBsum:1N7T PDBsum:2H3L PDBsum:2QBW
PDBsum:3CH8 ProteinModelPortal:Q96RT1 SMR:Q96RT1 IntAct:Q96RT1
MINT:MINT-199447 STRING:Q96RT1 PhosphoSite:Q96RT1 DMDM:116242614
PaxDb:Q96RT1 PRIDE:Q96RT1 Ensembl:ENST00000284037
Ensembl:ENST00000380935 Ensembl:ENST00000380936
Ensembl:ENST00000380938 Ensembl:ENST00000380939
Ensembl:ENST00000380943 Ensembl:ENST00000506030
Ensembl:ENST00000508515 GeneID:55914 KEGG:hsa:55914 UCSC:uc003jui.2
UCSC:uc003juj.2 UCSC:uc003juk.2 UCSC:uc011cqy.2 CTD:55914
GeneCards:GC05P065258 HGNC:HGNC:15842 HPA:HPA048606 MIM:606944
neXtProt:NX_Q96RT1 PharmGKB:PA27845 HOGENOM:HOG000060229
HOVERGEN:HBG052305 InParanoid:Q96RT1 KO:K12796 OMA:HNNVRAN
OrthoDB:EOG41JZBG PhylomeDB:Q96RT1 ChiTaRS:ERBB2IP
EvolutionaryTrace:Q96RT1 GenomeRNAi:55914 NextBio:61305
ArrayExpress:Q96RT1 Bgee:Q96RT1 CleanEx:HS_ERBB2IP
Genevestigator:Q96RT1 GermOnline:ENSG00000112851 Uniprot:Q96RT1
Length = 1412
Score = 125 (49.1 bits), Expect = 0.00034, P = 0.00034
Identities = 59/269 (21%), Positives = 128/269 (47%)
Query: 96 SSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIV 155
S ++ E++ + + + ++ +++ + + L +LP +++ A+I ++
Sbjct: 33 SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLI 92
Query: 156 TNLKELDLTGNLLSDW-KDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
NL+ELD++ N + ++ ++I + L ++ S N +SK G QL ++ L LN
Sbjct: 93 -NLRELDVSKNGIQEFPENI----KNCKVLTIVEASVNPISKLPDGFSQLLNLTQLYLND 147
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ ++ + L L+ L L N + + + + Q L+ L+L N E E
Sbjct: 148 AFLEFLPANFGR--LTKLQILELRENQLKMLPKTMNRLTQ----LERLDLGSNEFTEVPE 201
Query: 275 ILKLCQIRSLEQLYLNKNNLNRI--YYPNNDTIHEL-VSAH--ESHEESYLPFQNLCCLL 329
+L+ Q+ L++ +++ N L I + + + L VS + E EE +NL LL
Sbjct: 202 VLE--QLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLL 259
Query: 330 LGNNMIEDLASIDSLDSFPKLMDIRLSEN 358
L +N ++ L +++ S + +++ EN
Sbjct: 260 LSSNSLQQLP--ETIGSLKNITTLKIDEN 286
>TAIR|locus:2183144 [details] [associations]
symbol:AT5G19680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000211189
HSSP:Q9XHH2 EMBL:BT003139 EMBL:AK228123 IPI:IPI00542629
RefSeq:NP_197469.1 UniGene:At.23794 ProteinModelPortal:Q84WJ9
SMR:Q84WJ9 IntAct:Q84WJ9 PaxDb:Q84WJ9 PRIDE:Q84WJ9
EnsemblPlants:AT5G19680.1 GeneID:832088 KEGG:ath:AT5G19680
TAIR:At5g19680 InParanoid:Q84WJ9 OMA:ANIQKVQ PhylomeDB:Q84WJ9
ProtClustDB:CLSN2687164 Genevestigator:Q84WJ9 Uniprot:Q84WJ9
Length = 328
Score = 117 (46.2 bits), Expect = 0.00035, P = 0.00035
Identities = 68/287 (23%), Positives = 136/287 (47%)
Query: 96 SSKEEEDEMYVLSASNKHV---SIELVGKDKIQDKFSKFE-ELTSAALPYLGVSSPGANI 151
+S++E++ + + SN + S +L D ++ + E +LT+ L G+ S A +
Sbjct: 2 NSEKEDEPLEEIGDSNNVLDLTSYQLHSLDTVELPPNLIELDLTANRLS--GLDSRIAQL 59
Query: 152 GTIVTNLKELDLTGNLLSDWK-DIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSI-RI 209
T LK+L L NL+ D + + + L L L L +N ++K +P + ++
Sbjct: 60 ST----LKKLSLRQNLIDDSAVEPLSHWDALSDLEELVLRDNKLAK----VPDVSIFTKL 111
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSS----PIVQ-GFDNLQLL-N 263
LV + + +E + + L+EL++ N +++I + I++ G + L+++ N
Sbjct: 112 LVYDISFNEITSLEGISKASSTLKELYVSKNEVNKIMEIEHLHNLQILELGSNRLRVMEN 171
Query: 264 LEDNCIAE--WS-----EILKLCQIRSLEQLYLNKNNLNRIY-YPNNDTIHELVSAHE-- 313
LE+ E W +++ LC ++ ++++ L N L + + + EL +H
Sbjct: 172 LENFTKLEELWLGRNRIKVVNLCGLKCIKKISLQSNRLTSMKGFEECVALEELYLSHNGI 231
Query: 314 SHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPV 360
S E NL L + NN L S+D + + KL D+ L++N +
Sbjct: 232 SKMEGLSALVNLRVLDVSNNK---LTSVDDIQNLTKLEDLWLNDNQI 275
>UNIPROTKB|E2QWB0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
CTD:6249 KO:K10421 OMA:MEMSHNQ EMBL:AAEX03014651
RefSeq:XP_003639950.1 Ensembl:ENSCAFT00000012632 GeneID:477461
KEGG:cfa:477461 Uniprot:E2QWB0
Length = 1438
Score = 124 (48.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 213 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 269
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 270 GLFAPVHKVTK-IGFP 284
Score = 124 (48.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLSPGISLPE 86
K G F R L+ + + +
Sbjct: 114 LK-GIFTRPSKLTRKVQVED 132
Score = 48 (22.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 25/134 (18%), Positives = 61/134 (45%)
Query: 188 NLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHL--MGNSISEI 245
NL N S+ +++++R ++ +E +K L E+ HL M +++S++
Sbjct: 676 NLQNKQDSERSAHTKEIEALRGKLMAVVKEKESSLEAIKAKLDKAEDQHLVEMEDTLSKL 735
Query: 246 TPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK--LCQIRSLEQLYLNKNNLNRIYYPNND 303
+ + + L++L + N E ++++ Q+++ E+ L+ + L +
Sbjct: 736 QEAETKVKE----LEVLQAKCN---EQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKS 788
Query: 304 TIHELVSAHESHEE 317
I +L E+ E+
Sbjct: 789 EIKKLRQQLEAAEK 802
>UNIPROTKB|E2QWD0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03014651 Ensembl:ENSCAFT00000012621 NextBio:20852935
Uniprot:E2QWD0
Length = 1438
Score = 124 (48.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 213 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 269
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 270 GLFAPVHKVTK-IGFP 284
Score = 124 (48.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLSPGISLPE 86
K G F R L+ + + +
Sbjct: 114 LK-GIFTRPSKLTRKVQVED 132
Score = 48 (22.0 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 25/134 (18%), Positives = 61/134 (45%)
Query: 188 NLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHL--MGNSISEI 245
NL N S+ +++++R ++ +E +K L E+ HL M +++S++
Sbjct: 676 NLQNKQDSERSAHTKEIEALRGKLMAVVKEKESSLEAIKAKLDKAEDQHLVEMEDTLSKL 735
Query: 246 TPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK--LCQIRSLEQLYLNKNNLNRIYYPNND 303
+ + + L++L + N E ++++ Q+++ E+ L+ + L +
Sbjct: 736 QEAETKVKE----LEVLQAKCN---EQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKS 788
Query: 304 TIHELVSAHESHEE 317
I +L E+ E+
Sbjct: 789 EIKKLRQQLEAAEK 802
>UNIPROTKB|F1N365 [details] [associations]
symbol:FLII "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 GO:GO:0007275 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 InterPro:IPR007123 PANTHER:PTHR11977
Pfam:PF00626 EMBL:DAAA02048990 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00660000095502 OMA:MEEWNED IPI:IPI00692791
Ensembl:ENSBTAT00000021517 Uniprot:F1N365
Length = 1268
Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
Identities = 64/221 (28%), Positives = 106/221 (47%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL---NLSNN--LMSKEVTGLPQLKSIRI 209
+ +L+ L L GN L + A QLPAL L +L N S T L L +
Sbjct: 173 LVHLQTLVLNGNPL-----LHAQLRQLPALTALQTLHLRNTQRTQSNLPTSLEGLSHLAD 227
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
+ L+C + + E L ++LP L L+L N I+E+ S + + +L+ LNL N +
Sbjct: 228 VDLSCNDLTRVP-ECL-YALPGLRRLNLSSNQIAEL----SLCIDQWVHLETLNLSRNQL 281
Query: 270 AEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN----DTIHELVSAHESHEESYLPFQNL 325
+ C++ L++LYLN N L+ P+ ++ E ++A+ E +P ++L
Sbjct: 282 TSLPSAI--CKLTKLKRLYLNSNQLDFDGLPSGIGKLSSLEEFMAANNKLE--LIP-ESL 336
Query: 326 C-C-----LLLGNNMIEDLA-SIDSLDSFPKLMDIRLSENP 359
C C L+L N + L +I L +++D+R ENP
Sbjct: 337 CRCTKLRKLVLNKNRLVTLPEAIHFLTEI-EVLDVR--ENP 374
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 66/239 (27%), Positives = 106/239 (44%)
Query: 142 LGVSSPGANIGTIVTNLKELDLTGNLL----SDWKDIGAFGEQLPALAVLNLSNN--LMS 195
L SPGA IG + NL L L N L S W D LP L +L L +N +
Sbjct: 152 LSTISPGAFIG--LHNLLRLHLNSNRLQMINSQWFDA------LPNLEILMLGDNPIIRI 203
Query: 196 KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQG 255
K++ P +K +R LV+ G+N EI +L LE L + + ++ V +Q
Sbjct: 204 KDMNFQPLVK-LRSLVI--AGINL--TEIPDDALAGLENLESISFYDNRLSKVPQVALQK 258
Query: 256 FDNLQLLNLEDNCI-----AEWSEILKLCQIR--------SLEQLYL-NKNNLNRIYYPN 301
NL+ L+L N I ++S +L L ++ S++ L + N +L +I N
Sbjct: 259 AVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATN 318
Query: 302 NDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPV 360
N + + H ++ L L+L N + L +++S P L +I + NP+
Sbjct: 319 NPRLSYI------HPNAFFRLPKLESLMLNTNALSALYH-GTIESLPNLKEISIHSNPI 370
>RGD|67404 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10116 "Rattus norvegicus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005874 "microtubule" evidence=ISO] [GO:0005881
"cytoplasmic microtubule" evidence=ISO] [GO:0008017 "microtubule
binding" evidence=ISO;TAS] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0031116 "positive
regulation of microtubule polymerization" evidence=ISO] [GO:0035371
"microtubule plus end" evidence=ISO] [GO:0051010 "microtubule
plus-end binding" evidence=ISO] [GO:0044354 "macropinosome"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 SMART:SM00343
Pfam:PF01302 RGD:67404 GO:GO:0042803 GO:GO:0008270 GO:GO:0003676
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 HSSP:Q20728
IPI:IPI00201975 RefSeq:NP_113933.2 UniGene:Rn.22069 GeneID:65201
KEGG:rno:65201 NextBio:614156 EMBL:AJ237670
ProteinModelPortal:Q9JK25 SMR:Q9JK25 IntAct:Q9JK25 MINT:MINT-2738141
STRING:Q9JK25 PhosphoSite:Q9JK25 PRIDE:Q9JK25 UCSC:RGD:67404
ArrayExpress:Q9JK25 Genevestigator:Q9JK25 Uniprot:Q9JK25
Length = 1320
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 212 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 268
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 269 GLFAPVHKVTK-IGFP 283
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLS 79
K G F R L+
Sbjct: 114 LK-GIFTRPSKLT 125
>UNIPROTKB|F1MAH8 [details] [associations]
symbol:Clip1 "Protein Clip1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 RGD:67404
GO:GO:0008270 GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 IPI:IPI00201975
RefSeq:NP_113933.2 UniGene:Rn.22069 PRIDE:F1MAH8
Ensembl:ENSRNOT00000001685 GeneID:65201 KEGG:rno:65201
NextBio:614156 ArrayExpress:F1MAH8 Uniprot:F1MAH8
Length = 1320
Score = 124 (48.7 bits), Expect = 0.00041, P = 0.00041
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 212 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 268
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 269 GLFAPVHKVTK-IGFP 283
Score = 123 (48.4 bits), Expect = 0.00053, P = 0.00053
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLS 79
K G F R L+
Sbjct: 114 LK-GIFTRPSKLT 125
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 123 (48.4 bits), Expect = 0.00043, P = 0.00043
Identities = 46/141 (32%), Positives = 67/141 (47%)
Query: 158 LKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVT-GLPQLKSIRILVLNCTG 216
L ELDLT N LS D G L L L++ NN +S L S++ L L
Sbjct: 313 LSELDLTFNHLSRLDDSSFLG--LSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNE 370
Query: 217 VNWMQVEILKHSLPALEELH---LMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWS 273
++W +E + + L++L L GN I IT + G D L+ L+L DN I
Sbjct: 371 ISWT-IEDMNGAFSGLDKLRRLILQGNRIRSITKKA---FTGLDALEHLDLSDNAIMSLQ 426
Query: 274 EILKLCQIRSLEQLYLNKNNL 294
Q++ L+QL+LN ++L
Sbjct: 427 GNA-FSQMKKLQQLHLNTSSL 446
>UNIPROTKB|Q05443 [details] [associations]
symbol:LUM "Lumican" species:9913 "Bos taurus" [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
GO:GO:0005615 GO:GO:0005578 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0005583 GeneTree:ENSGT00600000084286
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:L11063 EMBL:BC102271
IPI:IPI00716158 PIR:A46743 RefSeq:NP_776359.1 UniGene:Bt.2452
ProteinModelPortal:Q05443 STRING:Q05443 PRIDE:Q05443
Ensembl:ENSBTAT00000002279 GeneID:280847 KEGG:bta:280847 CTD:4060
InParanoid:Q05443 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
NextBio:20804995 PMAP-CutDB:Q05443 PANTHER:PTHR24371:SF1
Uniprot:Q05443
Length = 342
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 60/218 (27%), Positives = 100/218 (45%)
Query: 118 LVGKDKIQDK-FSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGA 176
L+ KI+ K FSK ++L + Y ++ ++G + +L +L LT N +S +G+
Sbjct: 105 LLENSKIKGKVFSKLKQLKKLHINYNNLTE---SVGPLPKSLVDLQLTNNKISK---LGS 158
Query: 177 FGEQLPALAVLNLSNNLMSKEVTG--LPQLKSIRILVLNCTGVNWMQVEILKHSLP-ALE 233
F + L L ++L +N + ++ L LKS+ L L+ + Q+ L LP +L
Sbjct: 159 F-DGLVNLTFIHLQHNQLKEDAVSAALKGLKSLEYLDLS-----FNQMTKLPSGLPVSLL 212
Query: 234 ELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
L+L N IS I P + F LQ L L N +A+ + SL +L L+ N
Sbjct: 213 TLYLDNNKISNI-P--DEYFKRFSALQYLRLSHNELADSGVPGNSFNVSSLLELDLSYNK 269
Query: 294 LNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLG 331
L I N + + + +E + F C +LG
Sbjct: 270 LKSIPTVNENLENYYLEVNELEKFDVKSF----CKILG 303
>UNIPROTKB|P35458 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005737 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0030286 GO:GO:0003774 EMBL:X62773
IPI:IPI00600697 PIR:A41642 RefSeq:NP_001026538.1 UniGene:Gga.48036
ProteinModelPortal:P35458 STRING:P35458 PRIDE:P35458 GeneID:426238
KEGG:gga:426238 CTD:1639 eggNOG:KOG0971 HOVERGEN:HBG004956
KO:K04648 OrthoDB:EOG43TZTR NextBio:20827907 InterPro:IPR022157
Pfam:PF12455 Uniprot:P35458
Length = 1224
Score = 123 (48.4 bits), Expect = 0.00048, P = 0.00048
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 3 DCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYF 62
+ + + K+G RV R GTV YVG +G W+GV D GK+DG++ G +YF
Sbjct: 22 EASSKPLKVGSRVEVIGKGHR-GTVAYVGATLXATGKWVGVILDEAKGKNDGTVQGRKYF 80
Query: 63 QAKSQKSGSFVR 74
+ + G FVR
Sbjct: 81 TCE-ENHGIFVR 91
>UNIPROTKB|E9PCA3 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007188 "adenylate cyclase-modulating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0007567 "parturition"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0042562 "hormone binding" evidence=IEA] [GO:0060427 "lung
connective tissue development" evidence=IEA] [GO:0060658 "nipple
morphogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR01739 PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021
GO:GO:0030154 GO:GO:0004930 GO:GO:0007189 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 GO:GO:0007567
InterPro:IPR000372 SMART:SM00013 EMBL:AC107219 GO:GO:0060427
HGNC:HGNC:19718 GO:GO:0060658 EMBL:AC019341 EMBL:AC107056
EMBL:AC108017 EMBL:AC121161 EMBL:AC125489 IPI:IPI00965023
ProteinModelPortal:E9PCA3 SMR:E9PCA3 Ensembl:ENST00000460056
ArrayExpress:E9PCA3 Bgee:E9PCA3 Uniprot:E9PCA3
Length = 676
Score = 120 (47.3 bits), Expect = 0.00050, P = 0.00050
Identities = 64/249 (25%), Positives = 113/249 (45%)
Query: 151 IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNN-LMSKEVTGLPQLKSIRI 209
+ ++ +N+ + L NL+ F + L L L NN + S + L S+
Sbjct: 40 VPSVSSNVTAMSLQWNLIRKLPP-DCF-KNYHDLQKLYLQNNKITSISIYAFRGLNSLTK 97
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
L L+ + +++ + + L LE L + N +S I+P P G ++L LL L +N +
Sbjct: 98 LYLSHNRITFLKPGVFE-DLHRLEWLIIEDNHLSRISP---PTFYGLNSLILLVLMNNVL 153
Query: 270 AEWSEILKLCQ-IRSLEQLYLNKN---NLNRIYYPNNDTIHELVSAHE--SH--EESYLP 321
+ LCQ + L L L N NL + + + + LV +H E ++ P
Sbjct: 154 TRLPD-KPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAP 212
Query: 322 FQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIK 381
Q L L LG+N IE+L + D +L + LS NP+ + ++F + +L +
Sbjct: 213 LQKLDELDLGSNKIENLPPLIFKD-LKELSQLNLSYNPIQ---KIQANQFDYLVKLKSLS 268
Query: 382 ILNGSEVNS 390
L G E+++
Sbjct: 269 -LEGIEISN 276
>RGD|1307590 [details] [associations]
symbol:Flii "flightless I homolog (Drosophila)" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0005813 "centrosome" evidence=IEA;ISO]
[GO:0007275 "multicellular organismal development"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 RGD:1307590 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 eggNOG:COG4886
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626 EMBL:CH473948
GeneTree:ENSGT00660000095502 HOGENOM:HOG000016110 OMA:MEEWNED
CTD:2314 HOVERGEN:HBG051627 OrthoDB:EOG4TB49G EMBL:BC085829
IPI:IPI00211698 RefSeq:NP_001008280.1 UniGene:Rn.144698
STRING:Q5RKI5 Ensembl:ENSRNOT00000006753 GeneID:287375
KEGG:rno:287375 UCSC:RGD:1307590 InParanoid:Q5RKI5 NextBio:625981
Genevestigator:Q5RKI5 Uniprot:Q5RKI5
Length = 1270
Score = 123 (48.4 bits), Expect = 0.00050, P = 0.00050
Identities = 64/221 (28%), Positives = 108/221 (48%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPA---LAVLNLSNN--LMSKEVTGLPQLKSIRI 209
+ +L+ L L GN L + A QLPA L L+L N S T L L ++
Sbjct: 173 LVHLQTLVLNGNPL-----LHAQLRQLPAMMALQTLHLRNTQRTQSNLPTSLEGLSNLSD 227
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
+ L+C + + E L ++LP L L+L N I+E+ S + + +L+ LNL N +
Sbjct: 228 VDLSCNDLTRVP-ECL-YTLPNLHRLNLSSNQIAEL----SLCIDQWVHLETLNLSRNQL 281
Query: 270 AEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN----DTIHELVSAHESHEESYLPFQNL 325
+ C++ L++LYLN N L+ P+ ++ E ++A+ + E +P ++L
Sbjct: 282 TSLPSAI--CKLTKLKKLYLNSNKLDFDGLPSGIGKLTSLEEFMAANNNLE--LIP-ESL 336
Query: 326 C-C-----LLLGNNMIEDLA-SIDSLDSFPKLMDIRLSENP 359
C C L+L N + L +I L +++D+R ENP
Sbjct: 337 CRCPKLRKLVLNKNRLVTLPEAIHFLTEI-EVLDVR--ENP 374
>MGI|MGI:1919100 [details] [associations]
symbol:Clip4 "CAP-GLY domain containing linker protein
family, member 4" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
MGI:MGI:1919100 Pfam:PF01302 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 HOGENOM:HOG000007206
HOVERGEN:HBG057079 KO:K10423 EMBL:AK018895 EMBL:AK075758
EMBL:BC011280 EMBL:BC035226 IPI:IPI00284864 IPI:IPI00378257
IPI:IPI00553520 RefSeq:NP_084455.2 RefSeq:NP_780587.1
UniGene:Mm.196382 PDB:1WHJ PDB:1WHK PDBsum:1WHJ PDBsum:1WHK
ProteinModelPortal:Q8CI96 SMR:Q8CI96 STRING:Q8CI96
PhosphoSite:Q8CI96 PRIDE:Q8CI96 Ensembl:ENSMUST00000024854
GeneID:78785 KEGG:mmu:78785 UCSC:uc008dmw.2 UCSC:uc008dmz.1
UCSC:uc012awx.1 CTD:79745 InParanoid:Q8CI96 OMA:FATQLID
OrthoDB:EOG4V6ZGH EvolutionaryTrace:Q8CI96 NextBio:349496
Bgee:Q8CI96 Genevestigator:Q8CI96 GermOnline:ENSMUSG00000024059
Uniprot:Q8CI96
Length = 704
Score = 120 (47.3 bits), Expect = 0.00052, P = 0.00052
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG+RV +R+GT+K+ G G W G++ + +GK+DGS+ GV+YF S + G
Sbjct: 486 LGERVLVVG--QRVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSC-SPRYG 542
Query: 71 SFV---RVHNLSPGI 82
F RV LS +
Sbjct: 543 IFAPPSRVQRLSDSL 557
>SGD|S000005092 [details] [associations]
symbol:ALF1 "Alpha-tubulin folding protein" species:4932
"Saccharomyces cerevisiae" [GO:0007023 "post-chaperonin tubulin
folding pathway" evidence=IMP;IPI] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006457 "protein folding"
evidence=IMP;IPI] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IPI] [GO:0043014
"alpha-tubulin binding" evidence=IPI] InterPro:IPR000938
SGD:S000005092 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
EMBL:BK006947 EMBL:Z46843 HOGENOM:HOG000209180 OrthoDB:EOG42593D
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:X92517
GeneTree:ENSGT00700000104055 EMBL:Z71424 GO:GO:0007023 PIR:S55136
RefSeq:NP_014251.1 ProteinModelPortal:P53904 SMR:P53904
DIP:DIP-901N STRING:P53904 PaxDb:P53904 EnsemblFungi:YNL148C
GeneID:855574 KEGG:sce:YNL148C CYGD:YNL148c eggNOG:NOG249270
OMA:RRGWLRY NextBio:979691 Genevestigator:P53904 GermOnline:YNL148C
Uniprot:P53904
Length = 254
Score = 113 (44.8 bits), Expect = 0.00055, P = 0.00055
Identities = 33/90 (36%), Positives = 43/90 (47%)
Query: 14 RVHSANDARRIGTVKYVGEVQ-GYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSF 72
RV A R ++YVG + GTW GV++ GK+DG INGV F + GSF
Sbjct: 164 RVTVDGSAPREAILRYVGPLPLDVMGTWCGVEFPEAAGKNDGRINGVTLFGPVAPGHGSF 223
Query: 73 VRVHNLSPGISLPEALRVRYRGESSKEEED 102
VR P A+ + + E S E ED
Sbjct: 224 VR----------PRAVEILSKDEESAEVED 243
>MGI|MGI:1928401 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10090 "Mus musculus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IDA] [GO:0005882 "intermediate filament" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO;IDA] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031116 "positive regulation of microtubule
polymerization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0035371 "microtubule plus end" evidence=IDA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051010 "microtubule plus-end binding"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1928401 Pfam:PF01302 GO:GO:0005813
GO:GO:0046872 GO:GO:0006810 GO:GO:0008270 GO:GO:0003676
GO:GO:0030659 GO:GO:0001726 GO:GO:0044354 GO:GO:0008017
GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0035371 GO:GO:0031116 GeneTree:ENSGT00700000104055 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:AK220172 EMBL:BC007191 IPI:IPI00123063 IPI:IPI00761270
RefSeq:NP_062739.2 UniGene:Mm.241109 UniGene:Mm.441802 PDB:2CP7
PDBsum:2CP7 ProteinModelPortal:Q922J3 SMR:Q922J3 IntAct:Q922J3
STRING:Q922J3 PhosphoSite:Q922J3 PaxDb:Q922J3 PRIDE:Q922J3
Ensembl:ENSMUST00000111564 Ensembl:ENSMUST00000111566 GeneID:56430
KEGG:mmu:56430 UCSC:uc008zoa.1 UCSC:uc008zob.1
EvolutionaryTrace:Q922J3 NextBio:312602 Bgee:Q922J3
CleanEx:MM_CLIP1 Genevestigator:Q922J3
GermOnline:ENSMUSG00000049550 Uniprot:Q922J3
Length = 1391
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLS 79
K G F R L+
Sbjct: 114 LK-GIFTRPSKLT 125
Score = 123 (48.4 bits), Expect = 0.00056, P = 0.00056
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 212 KVGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 268
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 269 GLFAPVHKVTK-IGFP 283
>UNIPROTKB|Q9HBX9 [details] [associations]
symbol:RXFP1 "Relaxin receptor 1" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007188
"adenylate cyclase-modulating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007567 "parturition" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0042562
"hormone binding" evidence=IEA] [GO:0060427 "lung connective tissue
development" evidence=IEA] [GO:0060658 "nipple morphogenesis"
evidence=IEA] [GO:0004930 "G-protein coupled receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002172
InterPro:IPR008112 InterPro:IPR017452 Pfam:PF00001 Pfam:PF00057
PRINTS:PR00237 PRINTS:PR01739 PROSITE:PS00237 PROSITE:PS50068
PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0030154 GO:GO:0046872
GO:GO:0004930 GO:GO:0007189 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0042562 EMBL:CH471056
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 GO:GO:0007567 InterPro:IPR000372 SMART:SM00013
GO:GO:0060427 EMBL:AF190500 EMBL:AY899848 EMBL:AY899849
EMBL:AY899850 EMBL:AK300379 EMBL:BC112142 EMBL:BC113617
IPI:IPI00012456 IPI:IPI00219888 IPI:IPI00654878 IPI:IPI00876893
RefSeq:NP_001240657.1 RefSeq:NP_001240658.1 RefSeq:NP_067647.2
UniGene:Hs.591686 PDB:2JM4 PDBsum:2JM4 ProteinModelPortal:Q9HBX9
SMR:Q9HBX9 MINT:MINT-231156 STRING:Q9HBX9 PhosphoSite:Q9HBX9
DMDM:166209887 PRIDE:Q9HBX9 DNASU:59350 Ensembl:ENST00000307765
Ensembl:ENST00000343542 Ensembl:ENST00000423548
Ensembl:ENST00000470033 Ensembl:ENST00000471616 GeneID:59350
KEGG:hsa:59350 UCSC:uc003ipz.3 UCSC:uc010iqm.3 UCSC:uc010iqo.3
CTD:59350 GeneCards:GC04P159236 H-InvDB:HIX0024561 HGNC:HGNC:19718
HPA:HPA027067 MIM:606654 neXtProt:NX_Q9HBX9 PharmGKB:PA134868312
HOVERGEN:HBG026354 InParanoid:Q9HBX9 KO:K04306 OMA:YTLTTRP
PhylomeDB:Q9HBX9 ChEMBL:CHEMBL1293316 EvolutionaryTrace:Q9HBX9
GenomeRNAi:59350 NextBio:65261 ArrayExpress:Q9HBX9 Bgee:Q9HBX9
CleanEx:HS_RXFP1 Genevestigator:Q9HBX9 GermOnline:ENSG00000171509
GO:GO:0060658 Uniprot:Q9HBX9
Length = 757
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 64/249 (25%), Positives = 113/249 (45%)
Query: 151 IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNN-LMSKEVTGLPQLKSIRI 209
+ ++ +N+ + L NL+ F + L L L NN + S + L S+
Sbjct: 121 VPSVSSNVTAMSLQWNLIRKLPP-DCF-KNYHDLQKLYLQNNKITSISIYAFRGLNSLTK 178
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
L L+ + +++ + + L LE L + N +S I+P P G ++L LL L +N +
Sbjct: 179 LYLSHNRITFLKPGVFE-DLHRLEWLIIEDNHLSRISP---PTFYGLNSLILLVLMNNVL 234
Query: 270 AEWSEILKLCQ-IRSLEQLYLNKN---NLNRIYYPNNDTIHELVSAHE--SH--EESYLP 321
+ LCQ + L L L N NL + + + + LV +H E ++ P
Sbjct: 235 TRLPD-KPLCQHMPRLHWLDLEGNHIHNLRNLTFISCSNLTVLVMRKNKINHLNENTFAP 293
Query: 322 FQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIK 381
Q L L LG+N IE+L + D +L + LS NP+ + ++F + +L +
Sbjct: 294 LQKLDELDLGSNKIENLPPLIFKD-LKELSQLNLSYNPIQ---KIQANQFDYLVKLKSLS 349
Query: 382 ILNGSEVNS 390
L G E+++
Sbjct: 350 -LEGIEISN 357
>UNIPROTKB|F1MX63 [details] [associations]
symbol:PRELP "Prolargin" species:9913 "Bos taurus"
[GO:0007569 "cell aging" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR027216 PROSITE:PS51450 GO:GO:0031012
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0007569
GeneTree:ENSGT00600000084286 IPI:IPI00710385 UniGene:Bt.3202
PANTHER:PTHR24371:SF15 OMA:NKLEHLY EMBL:DAAA02041895
Ensembl:ENSBTAT00000023709 Uniprot:F1MX63
Length = 381
Score = 116 (45.9 bits), Expect = 0.00058, P = 0.00058
Identities = 63/247 (25%), Positives = 110/247 (44%)
Query: 151 IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSK-EVTGLPQLKSIRI 209
+ I + + L L N +++ + +F + L +NL NN + K + L +L S+
Sbjct: 96 VPVIPSRIHYLYLQNNFITELP-VESF-KNATGLRWINLDNNRIRKVDQRVLEKLPSLVF 153
Query: 210 LVLNCTGVNWMQVEILKHSLPA-LEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNC 268
L + Q+E + +LP LE+L L N IS I P + +NL LL+L+ N
Sbjct: 154 LYMEKN-----QLEEVPAALPRNLEQLRLSQNQISRIPP---GVFSKLENLLLLDLQHNK 205
Query: 269 IAEWSEILKLCQ-IRSLEQLYLNKNNLNRIYYPNNDTIHELV---SAHESHEESYLP-FQ 323
+++ Q +++L QL L N L ++ IH+L + E+ Y F
Sbjct: 206 LSDGVFKPDTFQGLKNLMQLNLAHNTLRKMPPKVPSAIHQLYLDSNRIEAIPSGYFKSFP 265
Query: 324 NLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSD-PGRGGISRFA-IIARLGKIK 381
NL + L N + D + + L+ + LS N +S P SR + I+
Sbjct: 266 NLAFIRLNYNQLSDRGLPKNSFNISNLLVLHLSHNRISSVPAIS--SRLEHLYLNNNSIE 323
Query: 382 ILNGSEV 388
+NG+++
Sbjct: 324 KINGTQI 330
>MGI|MGI:1925507 [details] [associations]
symbol:Lrrc9 "leucine rich repeat containing 9"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1925507 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
HSSP:P09661 GeneTree:ENSGT00670000097777 EMBL:AK019545
EMBL:AK029802 EMBL:AK039037 IPI:IPI00895296 IPI:IPI00970024
RefSeq:NP_001136200.1 RefSeq:NP_001136201.1 RefSeq:NP_084346.2
UniGene:Mm.266280 ProteinModelPortal:Q8CDN9 SMR:Q8CDN9 PRIDE:Q8CDN9
Ensembl:ENSMUST00000162159 GeneID:78257 KEGG:mmu:78257
UCSC:uc007nvm.2 UCSC:uc007nvn.2 CTD:341883 HOGENOM:HOG000113390
HOVERGEN:HBG108106 InParanoid:Q8CDN9 OMA:RIRAFND OrthoDB:EOG41G33B
NextBio:348565 Bgee:Q8CDN9 Genevestigator:Q8CDN9 Uniprot:Q8CDN9
Length = 1456
Score = 123 (48.4 bits), Expect = 0.00059, P = 0.00059
Identities = 50/177 (28%), Positives = 84/177 (47%)
Query: 223 EILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIR 282
E L + +LE LHL N I + + + NL+ L L+ N E S++ L +
Sbjct: 1185 ENLPPIMQSLEVLHLGYNGICNLVQLQ---LNRLRNLKFLFLQGN---EISQVEGLDNLI 1238
Query: 283 SLEQLYLNKNNLNRIYYPNNDTIHE----LVSAH--ESHEESYLPFQNLCCL---LLGNN 333
L++L ++ N + R + NDT L+ H E+ Q+L L LG N
Sbjct: 1239 VLQELVVDHNRI-RAF---NDTAFSKPSSLLMLHLEENRLRELSKLQSLVKLEKLFLGYN 1294
Query: 334 MIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVNS 390
I+D+ ++ LD P L ++ + NP+ R + R +I RL +++L+G +NS
Sbjct: 1295 KIQDITELEKLDVIPSLRELTVYGNPIC---RKMVHRHVLIFRLPNLQMLDGIPINS 1348
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 109 (43.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 50/173 (28%), Positives = 79/173 (45%)
Query: 125 QDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPAL 184
Q+ F K L L ++ A++ T + NLK LDL+GN L+ + G FG Q+
Sbjct: 139 QNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTHLPE-GLFGVQVKLQ 197
Query: 185 AVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
+L SN L S E +GL L S+R L N ++ I+ + L L + S +
Sbjct: 198 KLLLHSNRLASLE-SGL--LDSLRALTELQLHTNHLR-SIVPGAFDRLRSLSSLTLSENR 253
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI 297
+ + S + NL L L +N + E ++L +I L +L L L +
Sbjct: 254 LEFLPSALFLHSHNLTFLTLSENPLEELPKVL-FGEIGGLRELRLKSTQLRTL 305
Score = 53 (23.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 322 FQNLCCL---LLGNNMIEDLASIDSLDSFPKLMDIRLSENP 359
F+NL L L +N +E L D+ ++ P+L + L NP
Sbjct: 383 FRNLSSLEEVQLDHNQLETLPG-DAFEALPRLAGVLLGHNP 422
>TIGR_CMR|BA_1346 [details] [associations]
symbol:BA_1346 "internalin, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00395 EMBL:AE016879
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
KO:K13730 Gene3D:2.60.40.1220 InterPro:IPR014755 HSSP:P25146
InterPro:IPR001119 PROSITE:PS51272 RefSeq:NP_843808.1
RefSeq:YP_027515.1 ProteinModelPortal:Q81TD6 DNASU:1086745
EnsemblBacteria:EBBACT00000011375 EnsemblBacteria:EBBACT00000019330
GeneID:1086745 GeneID:2853061 KEGG:ban:BA_1346 KEGG:bat:BAS1246
HOGENOM:HOG000086132 ProtClustDB:CLSK916194
BioCyc:BANT260799:GJAJ-1320-MONOMER Uniprot:Q81TD6
Length = 542
Score = 118 (46.6 bits), Expect = 0.00061, P = 0.00061
Identities = 51/182 (28%), Positives = 92/182 (50%)
Query: 102 DEMYVLSASNKHVS-----IELVGKDKIQDKFSKFEELTSAA----LPYLGVSSPG-ANI 151
D + L SN ++ IE+ + ++ E++T+ A L YL +++ N+
Sbjct: 62 DHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITNV 121
Query: 152 GTI--VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRI 209
+ + N+ L L GN + D K + + LP L L L+ N + K+++G+ Q+K +
Sbjct: 122 APLSALKNVTYLTLAGNQIEDIKPLYS----LP-LTDLVLTRNKV-KDLSGIEQMKQLEE 175
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
L + G N ++ + L++LHL N + +ITP+SS + NLQ L+LE N I
Sbjct: 176 LWI---GKNEIKDVTPLSKMTQLKQLHLPNNELKDITPLSSLV-----NLQKLDLEANYI 227
Query: 270 AE 271
++
Sbjct: 228 SD 229
>MGI|MGI:1315192 [details] [associations]
symbol:Lrrc23 "leucine rich repeat containing 23"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1315192 eggNOG:COG4886
HSSP:P25147 EMBL:AC002397 GeneTree:ENSGT00670000097803 CTD:10233
HOGENOM:HOG000006511 HOVERGEN:HBG052867 OMA:RDNQIET EMBL:BC049601
IPI:IPI00127500 RefSeq:NP_038616.1 UniGene:Mm.3207
ProteinModelPortal:O35125 SMR:O35125 STRING:O35125 PaxDb:O35125
PRIDE:O35125 Ensembl:ENSMUST00000032218 Ensembl:ENSMUST00000112475
GeneID:16977 KEGG:mmu:16977 UCSC:uc009dru.1 InParanoid:O35125
OrthoDB:EOG4CJVHQ NextBio:291048 Bgee:O35125 CleanEx:MM_LRRC23
Genevestigator:O35125 GermOnline:ENSMUSG00000030125 Uniprot:O35125
Length = 340
Score = 115 (45.5 bits), Expect = 0.00062, P = 0.00062
Identities = 57/210 (27%), Positives = 93/210 (44%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
+L+ +D++ N ++D + + L A N L S + LP L+ I +
Sbjct: 89 HLRYVDISENHITDISPLNSLTHLLWLKAD---GNQLRSARMNELPYLQ---IASFSYNQ 142
Query: 217 VNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEIL 276
+ + E + H P L L L GN I ++T + P + +L L L N + E
Sbjct: 143 I--IDTEGIFH--PRLGSLDLKGNRIHQVTGLD-P--ERLSSLHTLELRGNQL----EST 191
Query: 277 KLCQIRSLEQLYLNKNNLNRIY----YPNNDTIHELVSAHESHEESYLPFQNLCCLLLGN 332
K + L+ LYL +N L ++ N T+H + E+ ++L L L +
Sbjct: 192 KGIYLPKLKNLYLAQNLLKKVEGLENLSNLTTLHLRDNQIETLNGFSQEMKSLQYLNLRS 251
Query: 333 NMIEDLASIDSLDSFPKLMDIRLSENPVSD 362
NMI DLA + L PKL + L +NP +D
Sbjct: 252 NMISDLAELAKLRDLPKLRALVLLDNPCAD 281
>UNIPROTKB|Q9HBL6 [details] [associations]
symbol:LRTM1 "Leucine-rich repeat and transmembrane
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 eggNOG:KOG0619 EMBL:AF225421 EMBL:BC040732
EMBL:BC074741 IPI:IPI00010227 IPI:IPI00478406 RefSeq:NP_065729.1
UniGene:Hs.591668 ProteinModelPortal:Q9HBL6 SMR:Q9HBL6
STRING:Q9HBL6 DMDM:74761612 PRIDE:Q9HBL6 Ensembl:ENST00000273286
Ensembl:ENST00000493075 GeneID:57408 KEGG:hsa:57408 UCSC:uc003dhl.3
CTD:57408 GeneCards:GC03M054928 H-InvDB:HIX0003383 HGNC:HGNC:25023
HPA:HPA013839 neXtProt:NX_Q9HBL6 PharmGKB:PA142671499
HOGENOM:HOG000290674 HOVERGEN:HBG067803 InParanoid:Q9HBL6
OMA:CLMMLAA OrthoDB:EOG42JNS0 PhylomeDB:Q9HBL6 GenomeRNAi:57408
NextBio:63528 Bgee:Q9HBL6 CleanEx:HS_LRTM1 Genevestigator:Q9HBL6
Uniprot:Q9HBL6
Length = 345
Score = 115 (45.5 bits), Expect = 0.00064, P = 0.00064
Identities = 44/121 (36%), Positives = 66/121 (54%)
Query: 176 AFGEQLPALAVLNLSNNLMSKEVTG-LPQLKSIRILVLNCTGVNWMQVEI-LKHSLPALE 233
AF +P L LNLSNN +S G L+ ++ VLN T + + +E L HSLP L
Sbjct: 69 AF-RSVPWLMTLNLSNNSLSNLAPGAFHGLQHLQ--VLNLTQNSLLSLESRLFHSLPQLR 125
Query: 234 ELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
EL L N+IS + P S + + ++NL +L ++ N + + L L + S+ L L K+N
Sbjct: 126 ELDLSSNNISHL-PTS--LGETWENLTILAVQQNQLQQLDRAL-LESMPSVRLLLL-KDN 180
Query: 294 L 294
L
Sbjct: 181 L 181
>DICTYBASE|DDB_G0269918 [details] [associations]
symbol:mpl1 "putative protein tyrosine phosphatase,
dual specificity" species:44689 "Dictyostelium discoideum"
[GO:0051270 "regulation of cellular component movement"
evidence=IMP] [GO:0043407 "negative regulation of MAP kinase
activity" evidence=IMP] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0016791 "phosphatase activity" evidence=IEA;IDA]
[GO:0016311 "dephosphorylation" evidence=IEA;IDA] [GO:0008138
"protein tyrosine/serine/threonine phosphatase activity"
evidence=IEA;IMP] [GO:0006470 "protein dephosphorylation"
evidence=IEA;IMP] [GO:0005576 "extracellular region" evidence=IC]
[GO:0035335 "peptidyl-tyrosine dephosphorylation" evidence=IEA]
[GO:0004725 "protein tyrosine phosphatase activity" evidence=IEA]
[GO:0004721 "phosphoprotein phosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006935
"chemotaxis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000340
InterPro:IPR000387 InterPro:IPR016130 InterPro:IPR020422
InterPro:IPR024950 Pfam:PF00782 PROSITE:PS00383 PROSITE:PS50054
PROSITE:PS50056 PROSITE:PS51450 SMART:SM00195
dictyBase:DDB_G0269918 GO:GO:0005576 EMBL:AAFI02000005
GenomeReviews:CM000150_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0004725 GO:GO:0035335 GO:GO:0043407
InterPro:IPR025875 Pfam:PF12799 GO:GO:0051270 GO:GO:0008138
PANTHER:PTHR10159 HSSP:Q16828 GO:GO:0043327 RefSeq:XP_646404.1
ProteinModelPortal:Q55CS7 PRIDE:Q55CS7 EnsemblProtists:DDB0238871
GeneID:8617360 KEGG:ddi:DDB_G0269918 OMA:KGSGTYY
ProtClustDB:CLSZ2431421 Uniprot:Q55CS7
Length = 834
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00065
Identities = 78/303 (25%), Positives = 137/303 (45%)
Query: 74 RVHNLSPGISLPEALRVRYRGE-SSKEEEDEMYVLSASNKHV--SIELV-GKDKIQDKFS 129
++ L+P + +LR G ++KE + ++ L+ K + S+E + G +
Sbjct: 74 KLSTLAPITNGNRSLRGSKDGSGTTKESKKKVLTLNEKQKLLLKSMEYIKGSGTYYGNYM 133
Query: 130 KFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQ---LPALAV 186
+F E+ Y+G + P ++ N EL +L+ D+ I EQ LP L
Sbjct: 134 EFYEIPIQI--YVG-TEPSETYPSLSYNT-ELR---SLILDFNKITEIPEQIGLLPNLKH 186
Query: 187 LNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEIT 246
L+L+ N +S+ L QLKS+ L L + I K + +L L L N+I +
Sbjct: 187 LSLAANQLSQVPEFLSQLKSLESLELGINQFTSFPLNICK--IKSLTLLRLETNNIKSL- 243
Query: 247 PVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTI- 305
P + +NL+ L+L DN + E + L ++E+L L N++ Y + I
Sbjct: 244 P--DDFIN-LENLKDLSLLDNQLKEIPDSLP----NNIEKLNLGCNDIINSYSKSLIRIS 296
Query: 306 HELVSAHESHEESYLPFQNLCCL------LLGNNMIEDLASIDSLDSFPKLMDIRLSENP 359
H L + + S + + ++L CL +L NMI+ + L S+ L+ + L N
Sbjct: 297 HSLTTLNLSENKIEVLDESLSCLVNVKTLILDCNMIKVIPG-SVLGSWKSLVTLNLPHNF 355
Query: 360 VSD 362
+SD
Sbjct: 356 ISD 358
>UNIPROTKB|J3KS54 [details] [associations]
symbol:FLII "Protein flightless-1 homolog" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007122 PRINTS:PR00597
PROSITE:PS51450 SMART:SM00262 InterPro:IPR003591 SMART:SM00369
InterPro:IPR007123 PANTHER:PTHR11977 Pfam:PF00626
InterPro:IPR025875 Pfam:PF12799 EMBL:AC127537 HGNC:HGNC:3750
ChiTaRS:FLII ProteinModelPortal:J3KS54 Ensembl:ENST00000578558
Uniprot:J3KS54
Length = 700
Score = 119 (46.9 bits), Expect = 0.00067, P = 0.00067
Identities = 59/222 (26%), Positives = 103/222 (46%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNL-----SNNLMSKEVTGLPQLKSIRI 209
+ +L+ L L GN L + A QLPA+ L + S T L L ++
Sbjct: 173 LVHLQTLVLNGNPL-----LHAQLRQLPAMTALQTLHLRSTQRTQSNLPTSLEGLSNLAD 227
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
+ L+C + + E L ++LP+L L+L N I+E+ S + + +++ LNL N +
Sbjct: 228 VDLSCNDLTRVP-ECL-YTLPSLRRLNLSSNQITEL----SLCIDQWVHVETLNLSRNQL 281
Query: 270 AEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN----DTIHELVSAHESHE---ESYLPF 322
+ C++ L++LYLN N L+ P+ + E ++A+ + E ES
Sbjct: 282 TSLPSAI--CKLSKLKKLYLNSNKLDFDGLPSGIGKLTNLEEFMAANNNLELVPESLCRC 339
Query: 323 QNLCCLLLGNNMIEDLA-SIDSLDSFPKLMDIRLSENPVSDP 363
L L+L N + L +I L +++D+R + N V P
Sbjct: 340 PKLRKLVLNKNHLVTLPEAIHFLTEI-EVLDVRENPNLVMPP 380
>WB|WBGene00003915 [details] [associations]
symbol:pan-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0002119 GO:GO:0018996 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 InterPro:IPR025875 Pfam:PF12799 HSSP:P25147
EMBL:Z34802 GeneTree:ENSGT00700000104056 GeneID:175596
KEGG:cel:CELE_M88.6 UCSC:M88.6b CTD:175596 HOGENOM:HOG000021363
NextBio:888834 PIR:T23841 RefSeq:NP_497925.1
ProteinModelPortal:Q9U3A0 SMR:Q9U3A0 PRIDE:Q9U3A0
EnsemblMetazoa:M88.6b WormBase:M88.6b ArrayExpress:Q9U3A0
Uniprot:Q9U3A0
Length = 594
Score = 118 (46.6 bits), Expect = 0.00069, P = 0.00069
Identities = 56/185 (30%), Positives = 82/185 (44%)
Query: 186 VLNLSNNLMSKEVTGL-PQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
+L+L N + K GL LKS++ L L + + V + L +EEL L N +
Sbjct: 131 LLSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEE-LKKVEELLLNEN---D 186
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYP---- 300
I + + G NL+ L L+ NC E + + SLEQL L+ NNL I +
Sbjct: 187 IRVLKTGTFDGMKNLKKLTLQ-NCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSA 245
Query: 301 -NNDTIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENP 359
N + +L S S+ E F L L+L NN I+ + SI L P L+ N
Sbjct: 246 LKNLRVLDLGSNKISNVEMK-SFPKLEKLVLNNNTIDSMKSI-KLKDLPSLVVALFDRNK 303
Query: 360 VSDPG 364
+ G
Sbjct: 304 IESIG 308
>UNIPROTKB|Q90944 [details] [associations]
symbol:EPYC "Epiphycan" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 CTD:1833 HOGENOM:HOG000273909
HOVERGEN:HBG006850 KO:K08127 OMA:CDDHELD OrthoDB:EOG4RV2S6
InterPro:IPR027217 PANTHER:PTHR24371:SF4 EMBL:D10485
IPI:IPI00586684 PIR:A41781 RefSeq:NP_001004382.1 UniGene:Gga.3583
ProteinModelPortal:Q90944 Ensembl:ENSGALT00000018390 GeneID:417890
KEGG:gga:417890 eggNOG:NOG314832 InParanoid:Q90944 NextBio:20821126
Uniprot:Q90944
Length = 316
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 44/148 (29%), Positives = 78/148 (52%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
+ NLK +DLT NL+S+ + AF +LP L L L +N + +++ LP ++ + N
Sbjct: 160 LNNLKRIDLTANLISEIHE-DAF-RRLPQLLELVLRDNRI-RQLPELPSTLTLIDISNNR 216
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
G ++ E K L L+ L++ N++ + P+ P ++LQ L+L++N I E E
Sbjct: 217 LGRKGIRNEAFK-DLHELQHLYITDNNLDHV-PLPLP-----ESLQALHLQNNNIQEMHE 269
Query: 275 ILKLCQIR-------SLEQLYLNKNNLN 295
C++R +LE + L+ N +N
Sbjct: 270 DT-FCKMRDFSYVRRALEDIRLDGNPIN 296
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 122 (48.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 55/167 (32%), Positives = 79/167 (47%)
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQ-LKSIRILVL 212
I N + LDL N ++ + G L L VL+L +N +S G Q LK + L L
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFTG--LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRL 116
Query: 213 NCTGVNWMQV--EILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIA 270
N N +QV E+L S P L L L N I I + V G NLQL N +CI
Sbjct: 117 N---KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIE 173
Query: 271 EWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHEL--VSAHESH 315
+ + +R LE L LN NN++RI + + + ++ + H +H
Sbjct: 174 DGA----FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNH 216
Score = 48 (22.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDP 363
TI + + S S+LP + L L +N I L + P L I LS N + +
Sbjct: 514 TIVDCSNQKLSRIPSHLP-EYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEV 572
Query: 364 GRGGISRFAIIARLGKIKILNGSEVNS 390
G A + L +L G+++ +
Sbjct: 573 REGAFDGAAGVQEL----MLTGNQLET 595
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 122 (48.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 55/167 (32%), Positives = 79/167 (47%)
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQ-LKSIRILVL 212
I N + LDL N ++ + G L L VL+L +N +S G Q LK + L L
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFTG--LKNLRVLHLEDNQVSVIERGAFQDLKQLERLRL 116
Query: 213 NCTGVNWMQV--EILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIA 270
N N +QV E+L S P L L L N I I + V G NLQL N +CI
Sbjct: 117 N---KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIE 173
Query: 271 EWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHEL--VSAHESH 315
+ + +R LE L LN NN++RI + + + ++ + H +H
Sbjct: 174 DGA----FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNH 216
Score = 48 (22.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDP 363
TI + + S S+LP + L L +N I L + P L I LS N + +
Sbjct: 514 TIVDCSNQKLSRIPSHLP-EYTTDLRLNDNDIAVLEATGIFKKLPNLRKINLSNNRIKEV 572
Query: 364 GRGGISRFAIIARLGKIKILNGSEVNS 390
G A + L +L G+++ +
Sbjct: 573 REGAFDGAAGVQEL----MLTGNQLET 595
>UNIPROTKB|E1BKT3 [details] [associations]
symbol:Bt.110205 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0030056 "hemidesmosome" evidence=IEA] [GO:0016323
"basolateral plasma membrane" evidence=IEA] [GO:0006605 "protein
targeting" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] Pfam:PF00595 InterPro:IPR001611 InterPro:IPR001478
PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228 GO:GO:0005634
GO:GO:0005737 GO:GO:0006605 GO:GO:0016323 SUPFAM:SSF50156
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030056
GeneTree:ENSGT00650000093182 OMA:HNNVRAN EMBL:DAAA02050134
EMBL:DAAA02050135 IPI:IPI00837830 Ensembl:ENSBTAT00000000533
Uniprot:E1BKT3
Length = 1460
Score = 122 (48.0 bits), Expect = 0.00076, P = 0.00076
Identities = 59/269 (21%), Positives = 128/269 (47%)
Query: 96 SSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIV 155
S ++ E++ + + + ++ +++ + + L +LP +++ A+I ++
Sbjct: 33 SLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTALPASIANLI 92
Query: 156 TNLKELDLTGNLLSDW-KDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
NL+ELD++ N + ++ ++I + L V+ S N +SK G QL ++ L LN
Sbjct: 93 -NLRELDVSKNGIQEFPENI----KNCKVLTVVEASVNPISKLPDGFSQLLNLTQLYLND 147
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ ++ + L L+ L L N + + + + Q L+ L+L N E E
Sbjct: 148 AFLEFLPANFGR--LTKLQILELRENQLKMLPKTMNRLTQ----LERLDLGSNEFTEVPE 201
Query: 275 ILKLCQIRSLEQLYLNKNNLNRI--YYPNNDTIHEL-VSAH--ESHEESYLPFQNLCCLL 329
+L+ Q+ L++ +++ N L I + + + L +S + E EE +NL LL
Sbjct: 202 VLE--QLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLL 259
Query: 330 LGNNMIEDLASIDSLDSFPKLMDIRLSEN 358
L +N ++ L +++ S + +++ EN
Sbjct: 260 LSSNSLQQLP--ETIGSLKNVTTLKIDEN 286
>FB|FBgn0263289 [details] [associations]
symbol:scrib "scribbled" species:7227 "Drosophila
melanogaster" [GO:0042048 "olfactory behavior" evidence=IMP]
[GO:0006963 "positive regulation of antibacterial peptide
biosynthetic process" evidence=IMP] [GO:0005918 "septate junction"
evidence=NAS;IDA;TAS] [GO:0016335 "morphogenesis of larval imaginal
disc epithelium" evidence=IMP] [GO:0016336 "establishment or
maintenance of polarity of larval imaginal disc epithelium"
evidence=IMP] [GO:0016333 "morphogenesis of follicular epithelium"
evidence=IMP] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0016327 "apicolateral plasma membrane" evidence=IDA]
[GO:0016328 "lateral plasma membrane" evidence=IDA] [GO:0016332
"establishment or maintenance of polarity of embryonic epithelium"
evidence=TAS] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=TAS] [GO:0016334 "establishment or maintenance of polarity
of follicular epithelium" evidence=IMP] [GO:0045197 "establishment
or maintenance of epithelial cell apical/basal polarity"
evidence=NAS;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007391 "dorsal closure" evidence=IMP;TAS] [GO:0050803
"regulation of synapse structure and activity" evidence=IMP]
[GO:0007280 "pole cell migration" evidence=NAS] [GO:0008406 "gonad
development" evidence=NAS] [GO:0008105 "asymmetric protein
localization" evidence=IMP;TAS] [GO:0008285 "negative regulation of
cell proliferation" evidence=TAS] [GO:0051726 "regulation of cell
cycle" evidence=NAS] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=TAS] [GO:0016323 "basolateral plasma membrane"
evidence=IDA;TAS] [GO:0035088 "establishment or maintenance of
apical/basal cell polarity" evidence=IMP] [GO:0019991 "septate
junction assembly" evidence=IMP] [GO:0045186 "zonula adherens
assembly" evidence=IMP] [GO:0045571 "negative regulation of
imaginal disc growth" evidence=IMP] [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0007472 "wing disc morphogenesis"
evidence=IMP] [GO:0048749 "compound eye development" evidence=IMP]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IMP] [GO:0045198 "establishment of epithelial cell
apical/basal polarity" evidence=IMP] [GO:0022402 "cell cycle
process" evidence=IMP] [GO:0031594 "neuromuscular junction"
evidence=IDA] [GO:0030100 "regulation of endocytosis" evidence=IMP]
[GO:0072002 "Malpighian tubule development" evidence=IMP]
[GO:0001737 "establishment of imaginal disc-derived wing hair
orientation" evidence=IMP] [GO:0042067 "establishment of ommatidial
planar polarity" evidence=IMP] [GO:0007464 "R3/R4 cell fate
commitment" evidence=IMP] [GO:0072089 "stem cell proliferation"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0045169 "fusome" evidence=IDA] Pfam:PF00595 InterPro:IPR001611
InterPro:IPR001478 PROSITE:PS50106 PROSITE:PS51450 SMART:SM00228
EMBL:AE014297 GO:GO:0001708 GO:GO:0005576 GO:GO:0005918
GO:GO:0007391 GO:GO:0019991 GO:GO:0007464 eggNOG:COG4886
GO:GO:0048863 GO:GO:0005179 GO:GO:0031594 GO:GO:0050803
GO:GO:0016323 GO:GO:0000122 GO:GO:0051726 GO:GO:0030100
GO:GO:0005923 GO:GO:0007608 GO:GO:0000902 GO:GO:0042048
SUPFAM:SSF50156 GO:GO:0016328 InterPro:IPR025875 Pfam:PF12799
GO:GO:0050680 GO:GO:0007318 GO:GO:0060581 GO:GO:0016327
GO:GO:0045186 GO:GO:0045823 GO:GO:0045169 GO:GO:0042058
GO:GO:0001737 GO:GO:0045198 GO:GO:0072089 GO:GO:0016332
GO:GO:0022402 GO:GO:0008593 GO:GO:0030714 GO:GO:0016336
GO:GO:0046425 GO:GO:0045571 ChiTaRS:scrib
GeneTree:ENSGT00650000093182 EMBL:AF190774 EMBL:AJ252084
EMBL:AJ271647 EMBL:AY167903 EMBL:AY167904 EMBL:AY167905
EMBL:AY167906 EMBL:AY069661 EMBL:BT015240 EMBL:AY060469
RefSeq:NP_001014669.1 RefSeq:NP_001014670.2 RefSeq:NP_001036761.3
RefSeq:NP_001247318.1 RefSeq:NP_524754.2 RefSeq:NP_733154.1
RefSeq:NP_733155.2 RefSeq:NP_733156.1 ProteinModelPortal:Q7KRY7
SMR:Q7KRY7 MINT:MINT-1327318 STRING:Q7KRY7 PaxDb:Q7KRY7
PRIDE:Q7KRY7 EnsemblMetazoa:FBtr0308625 GeneID:44448
KEGG:dme:Dmel_CG43398 CTD:23513 FlyBase:FBgn0263289
InParanoid:Q7KRY7 KO:K16175 OrthoDB:EOG4K0P38 GenomeRNAi:44448
NextBio:837278 Bgee:Q7KRY7 GermOnline:CG5462 GO:GO:0072002
Uniprot:Q7KRY7
Length = 1851
Score = 123 (48.4 bits), Expect = 0.00077, P = 0.00077
Identities = 59/209 (28%), Positives = 98/209 (46%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
NL ELD++ N D DI + L +L V + S+N + K +G QLK++ +L LN
Sbjct: 84 NLVELDVSRN---DIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMS 140
Query: 217 VNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEIL 276
+ + + SL LE L L N + + S + + L+ L+L DN I + L
Sbjct: 141 LTTLPADF--GSLTQLESLELRENLLKHLPETISQLTK----LKRLDLGDNEIEDLPPYL 194
Query: 277 KLCQIRSLEQLYLNKNNLNRIYYPNNDTIHEL--VSAHESHEESYLPFQ-----NLCCLL 329
+ L +L+L+ N L R+ P + +L + E+ E LP + +L L
Sbjct: 195 GY--LPGLHELWLDHNQLQRLP-PELGLLTKLTYLDVSENRLEE-LPNEISGLVSLTDLD 250
Query: 330 LGNNMIEDLASIDSLDSFPKLMDIRLSEN 358
L N++E L D + +L ++L +N
Sbjct: 251 LAQNLLEALP--DGIAKLSRLTILKLDQN 277
>UNIPROTKB|F1S5B4 [details] [associations]
symbol:LGR6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR002131 PRINTS:PR00373
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000092962 CTD:59352 KO:K08399 OMA:AYGKAPS
EMBL:CU929522 EMBL:FP565468 RefSeq:XP_003130662.2
Ensembl:ENSSSCT00000011954 GeneID:100511400 KEGG:ssc:100511400
Uniprot:F1S5B4
Length = 967
Score = 120 (47.3 bits), Expect = 0.00078, P = 0.00078
Identities = 67/236 (28%), Positives = 108/236 (45%)
Query: 158 LKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSK-EVTGLPQLKSIRILVLNCTG 216
L+EL L+GN LS G L +L +L L NN + L +L S++ L L+
Sbjct: 91 LEELRLSGNHLSHIPGQAFSG--LYSLKILMLQNNQLGGIPAEALWELPSLQSLRLDANL 148
Query: 217 VNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEIL 276
++ + + LPAL L L N+++E+ PV + + LQ + L N I+ +
Sbjct: 149 ISLVPDGSFE-GLPALRHLWLDDNALTEV-PVGA--LSSLPALQAMTLALNRISHVPDYA 204
Query: 277 KLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEE-SYLP--FQNLCCLL-LG- 331
+ SL L+L+ N + + + + +H L + +H E P + L L LG
Sbjct: 205 -FQNLSSLVVLHLHNNRIQHLGAHSFEGLHSLETLDLNHNELQEFPVAIRTLGRLQELGF 263
Query: 332 -NNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGS 386
NN I+ + L + P L I +NP+ GR S F + RL + LNG+
Sbjct: 264 HNNNIQTIPEKAFLGN-PLLQTIHFYDNPIQFVGR---SAFRHLPRLHTLS-LNGA 314
>RGD|62019 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA;ISO;IDA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=NAS] [GO:0008017 "microtubule
binding" evidence=IDA;TAS] [GO:0030425 "dendrite" evidence=TAS]
[GO:0042599 "lamellar body" evidence=TAS] [GO:0051010 "microtubule
plus-end binding" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
RGD:62019 GO:GO:0005875 GO:GO:0030425 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 GO:GO:0007026
GO:GO:0042599 HOGENOM:HOG000092755 HOVERGEN:HBG007123 CTD:7461
KO:K10422 OrthoDB:EOG4X3H0M EMBL:AJ000485 IPI:IPI00195929 PIR:T42734
RefSeq:NP_068837.1 UniGene:Rn.10893 ProteinModelPortal:O55156
SMR:O55156 IntAct:O55156 STRING:O55156 PhosphoSite:O55156
PRIDE:O55156 GeneID:29264 KEGG:rno:29264 UCSC:RGD:62019
InParanoid:O55156 NextBio:608596 ArrayExpress:O55156
Genevestigator:O55156 Uniprot:O55156
Length = 1046
Score = 123 (48.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K G
Sbjct: 222 LGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KFG 278
Query: 71 SFVRVHNL 78
F +H +
Sbjct: 279 LFAPIHKV 286
Score = 43 (20.2 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 86 EALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDK 127
E L V YRG++ E + + A K + E++ + + Q +
Sbjct: 736 EGLDVEYRGQAQAIEFLKEQISLAEKKMLDYEMLQRAEAQSR 777
>MGI|MGI:1313136 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0051010 "microtubule plus-end binding" evidence=ISO]
InterPro:IPR000938 MGI:MGI:1313136 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 HOGENOM:HOG000092755
HOVERGEN:HBG007123 CTD:7461 KO:K10422 OMA:HWRAQLE EMBL:AJ228863
EMBL:AJ228865 EMBL:AJ228868 EMBL:AJ228869 EMBL:AJ228870
EMBL:AJ228872 EMBL:AJ228876 EMBL:AJ228880 EMBL:AJ228867
EMBL:AJ228875 EMBL:AJ228871 EMBL:AJ228873 EMBL:AJ228877
EMBL:AJ228866 EMBL:AJ228879 EMBL:AJ228878 EMBL:AJ228874
EMBL:AF289667 EMBL:AF289664 EMBL:BC039162 EMBL:BC053048
IPI:IPI00408543 IPI:IPI00467854 PIR:T42720 RefSeq:NP_001034251.1
RefSeq:NP_034120.2 UniGene:Mm.255138 ProteinModelPortal:Q9Z0H8
SMR:Q9Z0H8 IntAct:Q9Z0H8 STRING:Q9Z0H8 PhosphoSite:Q9Z0H8
PaxDb:Q9Z0H8 PRIDE:Q9Z0H8 Ensembl:ENSMUST00000036999
Ensembl:ENSMUST00000100647 GeneID:269713 KEGG:mmu:269713
UCSC:uc008zwi.1 UCSC:uc008zwj.1 InParanoid:Q9Z0H8 OrthoDB:EOG4X3H0M
NextBio:393005 Bgee:Q9Z0H8 CleanEx:MM_CLIP2 Genevestigator:Q9Z0H8
GermOnline:ENSMUSG00000063146 Uniprot:Q9Z0H8
Length = 1047
Score = 123 (48.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K G
Sbjct: 222 LGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KFG 278
Query: 71 SFVRVHNL 78
F +H +
Sbjct: 279 LFAPIHKV 286
Score = 43 (20.2 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 86 EALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDK 127
E L V YRG++ E + + A K + E++ + + Q +
Sbjct: 737 EGLDVEYRGQAQAIEFLKEQISLAEKKMLDYEMLQRAEAQSR 778
>UNIPROTKB|Q71X29 [details] [associations]
symbol:LMOf2365_2370 "Cell wall surface anchor family
protein" species:265669 "Listeria monocytogenes serotype 4b str.
F2365" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 eggNOG:COG4886 EMBL:AE017262
GenomeReviews:AE017262_GR InterPro:IPR025875 Pfam:PF12799
InterPro:IPR019931 TIGRFAMs:TIGR01167 Gene3D:2.60.40.1220
InterPro:IPR014755 RefSeq:YP_014959.1 ProteinModelPortal:Q71X29
STRING:Q71X29 GeneID:2797948 KEGG:lmf:LMOf2365_2370 PATRIC:20326106
HOGENOM:HOG000067549 OMA:IDAPYQT ProtClustDB:CLSK564898
InterPro:IPR025556 Pfam:PF13461 Uniprot:Q71X29
Length = 795
Score = 119 (46.9 bits), Expect = 0.00078, P = 0.00078
Identities = 65/236 (27%), Positives = 107/236 (45%)
Query: 133 ELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNN 192
ELT A L + V A+I + + + +TG L+SD + E+ + L SN
Sbjct: 54 ELTEANLETISV----ADI-SYMNGVPGYAVTG-LISDLTGL----EKAVNMTKLYFSNQ 103
Query: 193 LMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPV-SSP 251
K + + L +++ +V TG+N ++ L +PALEEL L G+ I++ TP+
Sbjct: 104 TEIKNLNQIKDLPNLKKIVGVTTGLN--DIKALGE-MPALEELELGGDYITDFTPLLEKD 160
Query: 252 IVQGF--DNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIY-YPNNDTIHEL 308
++ F ++ LN + I E K ++SLE L + NN+ + ND I L
Sbjct: 161 NLKSFSYNSYAWLNPAYHQIDN-EEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNL 219
Query: 309 VSAHESHEE--SYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSD 362
++ + L L L NN +L SIDSL++ L N ++D
Sbjct: 220 NLSYNKFTNIAPIATMKELKVLYLNNN---NLTSIDSLNTLRGLTIAYADNNNITD 272
>UNIPROTKB|E1BV71 [details] [associations]
symbol:ECM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005614 "interstitial matrix" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0010811 "positive regulation of
cell-substrate adhesion" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0070052 "collagen V binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001007 Pfam:PF00093
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51450 SMART:SM00214
GO:GO:0030198 GO:GO:0008201 GO:GO:0010811
GeneTree:ENSGT00700000104006 GO:GO:0005614 CTD:1842 KO:K08119
OMA:AVWSPKP EMBL:AADN02013900 IPI:IPI00573040 RefSeq:XP_414297.2
UniGene:Gga.53618 Ensembl:ENSGALT00000007480 GeneID:415953
KEGG:gga:415953 Uniprot:E1BV71
Length = 704
Score = 118 (46.6 bits), Expect = 0.00087, P = 0.00087
Identities = 55/187 (29%), Positives = 88/187 (47%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
+L LDLTGN+++ + AF +P L ++LS N +S G K+++ L
Sbjct: 336 DLTSLDLTGNIITTISN-EAFNG-IPNLEWIDLSKNNISSSGIGPHAFKTLKKLKRLYLD 393
Query: 217 VNWMQVEILKHSLPA-LEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWS-E 274
N M V I LP+ LEE+ + N + I +QG NL L LE N ++E +
Sbjct: 394 GN-MLVHI-PSELPSTLEEIKINDNQLHAI---DEDALQGLKNLVTLELEGNKLSEANVS 448
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEE-SYLPFQN---LCCLLL 330
L ++SL L L +N I T+ EL + EE S + F + + ++L
Sbjct: 449 PLAFYPLKSLSYLRLGRNKFRIIPQGLPTTLEELYLENNQIEEVSEICFNHTRKINVIVL 508
Query: 331 GNNMIED 337
+N +E+
Sbjct: 509 KHNKLEE 515
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 118 (46.6 bits), Expect = 0.00089, P = 0.00089
Identities = 48/166 (28%), Positives = 82/166 (49%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFG-EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLN 213
+TNL+ L L G L+D G + L +L+ + N L+ T L +L +++ L LN
Sbjct: 215 LTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYD--NKLVRVPQTALQKLPNLKFLDLN 272
Query: 214 CTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNL-QLLNLEDNCIAEW 272
++ +Q K+ L L+EL + N++ E+ + DNL +L LE ++
Sbjct: 273 KNPIHKIQEGDFKNML-RLKELGI--NNMGELVSIDR---FALDNLPELTKLEATNNPKF 326
Query: 273 SEILKLC--QIRSLEQLYLNKNNLNRIYYPNNDTIHEL--VSAHES 314
S + +L + +LE L LN N LN +Y D++ L +S H +
Sbjct: 327 SYVSRLAFRDLPALESLMLNNNALNSLYQATADSLPNLREISIHSN 372
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 121 (47.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 55/167 (32%), Positives = 79/167 (47%)
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQ-LKSIRILVL 212
I N + LDL N ++ + G L L VL+L +N +S G Q LK + L L
Sbjct: 59 IPRNAERLDLDRNNITRITKMDFAG--LKNLRVLHLEDNQVSIIERGAFQDLKQLERLRL 116
Query: 213 NCTGVNWMQV--EILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIA 270
N N +QV E+L S P L L L N I I + V G NLQL N +CI
Sbjct: 117 N---KNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGVTGVKNLQLDNNHISCIE 173
Query: 271 EWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHEL--VSAHESH 315
+ + +R LE L LN NN++RI + + + ++ + H +H
Sbjct: 174 DGA----FRALRDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNH 216
Score = 48 (22.0 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 318 SYLPFQNLCCLLLGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARL 377
S+LP + L L +N I L + P L I LS N + + G A + L
Sbjct: 528 SHLP-EYTTDLRLNDNDISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQEL 586
Query: 378 GKIKILNGSEVNS 390
+L G+++ +
Sbjct: 587 ----MLTGNQLET 595
>FB|FBgn0028992 [details] [associations]
symbol:sds22 "sds22" species:7227 "Drosophila melanogaster"
[GO:0008599 "protein phosphatase type 1 regulator activity"
evidence=ISS] [GO:0016336 "establishment or maintenance of polarity
of larval imaginal disc epithelium" evidence=IMP] [GO:0016334
"establishment or maintenance of polarity of follicular epithelium"
evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0000164 "protein phosphatase type
1 complex" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0008285 eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799
GO:GO:0016334 GO:GO:0016336 HSSP:Q9XHH2 EMBL:AF214664
ProteinModelPortal:Q9U3W5 SMR:Q9U3W5 STRING:Q9U3W5 PaxDb:Q9U3W5
PRIDE:Q9U3W5 FlyBase:FBgn0028992 InParanoid:Q9U3W5
OrthoDB:EOG4CJSZZ ArrayExpress:Q9U3W5 Bgee:Q9U3W5 Uniprot:Q9U3W5
Length = 326
Score = 113 (44.8 bits), Expect = 0.00095, P = 0.00095
Identities = 63/274 (22%), Positives = 126/274 (45%)
Query: 126 DKFSKFEELTSAALPYL--GVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPA 183
+K FE LT +L + N+ ++ T L EL+L N ++ +++ + LP
Sbjct: 52 EKLENFEPLTRIERLFLRWNLIKKIENLSSLKT-LIELELYDNQITKIENL----DDLPH 106
Query: 184 LAVLNLSNNLMSK--EVTGLPQLKSIRILVLNCTGV-------NWMQVEILKHSLPALEE 234
L VL++S N ++K + L +L+ + + T + N +E+ + L +E
Sbjct: 107 LEVLDISFNRLTKIENLDKLVKLEKVYFVSNRITQIENLDMLTNLTMLELGDNKLKKIEN 166
Query: 235 LHLMGNSISEITPVSSPI--VQGFD---NLQLLNLEDNCIAEWSEILKLCQIRSLEQLYL 289
+ ++ N + ++ + I ++ D NL++L+L+ N I + + KL +R +LY+
Sbjct: 167 IEMLVN-LRQLFLGKNKIAKIENLDTLVNLEILSLQANRIVKIETLEKLANLR---ELYV 222
Query: 290 NKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCL---LLGNNMIEDLASIDSLDS 346
++N + I + +T E + ++ + + L L L +N ++D I+ L
Sbjct: 223 SENGVETIENLSENTKLETLDLAKNRLKGIANLEKLELLEELWLNHNGVDDWKDIELLKV 282
Query: 347 FPKLMDIRLSENPVSDPGRGGISRFAIIARLGKI 380
L I L NP++ R I+ +L KI
Sbjct: 283 NKALQTIYLEYNPLAKDVRYRSKLRDILPQLQKI 316
>UNIPROTKB|P30622 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042803 "protein homodimerization activity" evidence=TAS]
[GO:0000776 "kinetochore" evidence=TAS] [GO:0007067 "mitosis"
evidence=TAS] [GO:0046872 "metal ion binding" evidence=NAS]
[GO:0031116 "positive regulation of microtubule polymerization"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0001578
"microtubule bundle formation" evidence=IMP] [GO:0015631 "tubulin
binding" evidence=IDA] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=IMP]
[GO:0044354 "macropinosome" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] [GO:0051010 "microtubule plus-end binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IDA]
[GO:0005874 "microtubule" evidence=ISS] [GO:0005768 "endosome"
evidence=TAS] [GO:0005882 "intermediate filament" evidence=TAS]
[GO:0000087 "M phase of mitotic cell cycle" evidence=TAS]
[GO:0000236 "mitotic prometaphase" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
EMBL:M97501 Pfam:PF01302 GO:GO:0005829 GO:GO:0005813
Pathway_Interaction_DB:lis1pathway Reactome:REACT_115566
GO:GO:0042803 Reactome:REACT_21300 GO:GO:0000776 GO:GO:0046872
GO:GO:0005768 GO:GO:0006810 GO:GO:0008270 GO:GO:0005882
GO:GO:0003676 GO:GO:0030659 GO:GO:0001726 GO:GO:0001578
eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0051010 GO:GO:0031116 GO:GO:0000236 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:X64838 EMBL:BC114213 EMBL:BC117209 EMBL:BC126305
IPI:IPI00013455 IPI:IPI00027172 IPI:IPI00217113 PIR:A43336
PIR:S22695 RefSeq:NP_001234926.1 RefSeq:NP_002947.1
RefSeq:NP_937883.1 UniGene:Hs.524809 PDB:2CP5 PDB:2CP6 PDB:2E3H
PDB:2E3I PDB:2E4H PDB:2HQH PDB:2QK0 PDB:3E2U PDB:3RDV PDBsum:2CP5
PDBsum:2CP6 PDBsum:2E3H PDBsum:2E3I PDBsum:2E4H PDBsum:2HQH
PDBsum:2QK0 PDBsum:3E2U PDBsum:3RDV ProteinModelPortal:P30622
SMR:P30622 DIP:DIP-42826N IntAct:P30622 MINT:MINT-1781312
STRING:P30622 PhosphoSite:P30622 DMDM:261260059 PaxDb:P30622
PRIDE:P30622 Ensembl:ENST00000302528 Ensembl:ENST00000358808
Ensembl:ENST00000537178 Ensembl:ENST00000540338 GeneID:6249
KEGG:hsa:6249 UCSC:uc001ucg.2 UCSC:uc001uch.1 UCSC:uc001uci.1
GeneCards:GC12M122755 HGNC:HGNC:10461 HPA:CAB004399 HPA:HPA026678
MIM:179838 neXtProt:NX_P30622 PharmGKB:PA162382349 OMA:MEMSHNQ
ChiTaRS:CLIP1 EvolutionaryTrace:P30622 GenomeRNAi:6249
NextBio:24265 ArrayExpress:P30622 Bgee:P30622 CleanEx:HS_CLIP1
Genevestigator:P30622 GermOnline:ENSG00000130779 Uniprot:P30622
Length = 1438
Score = 125 (49.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 213 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 269
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNK 112
G F VH ++ I P + + + + M SAS K
Sbjct: 270 GLFAPVHKVTK-IGFPSTTPAKAKANAVRRV---MATTSASLK 308
Score = 43 (20.2 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 20/107 (18%), Positives = 47/107 (43%)
Query: 188 NLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHL--MGNSISEI 245
NL N S+ +++++R ++ +E ++ L E+ HL M ++++++
Sbjct: 676 NLQNQQDSERAAHAKEMEALRAKLMKVIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKL 735
Query: 246 TPVSSPIVQGFDNLQL-LNLEDNCIAEWSEILKLCQIRSLEQLYLNK 291
+ + + LQ N + I ++ LK + + L+ L K
Sbjct: 736 QEAEIKVKE-LEVLQAKCNEQTKVIDNFTSQLKATEEKLLDLDALRK 781
>UNIPROTKB|F1NDB4 [details] [associations]
symbol:LRRC32 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0046007 "negative regulation of
activated T cell proliferation" evidence=IEA] [GO:0050710 "negative
regulation of cytokine secretion" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR003591 SMART:SM00369
GO:GO:0010628 GO:GO:0046007 GO:GO:0050710
GeneTree:ENSGT00700000104185 OMA:CCGNGWL EMBL:AADN02059354
IPI:IPI00584082 Ensembl:ENSGALT00000001192 Uniprot:F1NDB4
Length = 640
Score = 117 (46.2 bits), Expect = 0.00098, P = 0.00098
Identities = 62/213 (29%), Positives = 100/213 (46%)
Query: 156 TNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNN----LMSKEVTGLPQLKSIRILV 211
T+L+ LDL+ N +S + G F + +L +NL+NN L G+ L + IL
Sbjct: 39 TSLQCLDLSSNQIS-FITPGVFAH-MTSLLEINLANNNLYELAQTGTEGIGFLPKVEILD 96
Query: 212 LNCTGV-NWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIA 270
L+ + N M +K + PAL L L GNSI I S + QG NL ++L+ N I
Sbjct: 97 LSHNSLYNGMAEYFIKRA-PALRYLSLAGNSIIMI---SHKMFQGSPNLVEIDLQSNIIM 152
Query: 271 EWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQN-----L 325
E E + +L +L L+ N++ I N + E++ + ES+ ++ L
Sbjct: 153 EIEEGA-FETLLNLSRLNLSMNSITCISDFNLRQL-EILDLSRNSIESFHTTESDDEYSL 210
Query: 326 CCLLLGNNMIEDLASIDSLDSFPKLMDIRLSEN 358
CL L N + ++ KL+ + LS+N
Sbjct: 211 KCLDLSENKLLRFPVFPQVN---KLVTLNLSKN 240
>WB|WBGene00010621 [details] [associations]
symbol:egg-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001611 InterPro:IPR027202 PROSITE:PS51450 GO:GO:0009792
GO:GO:0040010 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0040011 GO:GO:0048477 GO:GO:0040015 EMBL:Z81098
GeneTree:ENSGT00700000104286 PANTHER:PTHR24371:SF0 HSSP:P12830
EMBL:JQ292908 PIR:T23395 RefSeq:NP_492348.1
ProteinModelPortal:P90920 SMR:P90920 DIP:DIP-24762N
MINT:MINT-1081293 STRING:P90920 EnsemblMetazoa:K07A12.2
GeneID:172670 KEGG:cel:CELE_K07A12.2 UCSC:K07A12.2 CTD:172670
WormBase:K07A12.2 HOGENOM:HOG000020436 InParanoid:P90920
OMA:INNFELM NextBio:876503 Uniprot:P90920
Length = 961
Score = 119 (46.9 bits), Expect = 0.00099, P = 0.00099
Identities = 63/270 (23%), Positives = 118/270 (43%)
Query: 124 IQDK-FSKFEELTSAALPYLGVSS-PGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQL 181
I DK F+ LT L + P ++ + +L LD++GN L
Sbjct: 141 IPDKAFNGLSALTQLRLENNAICDFPPKSLDAVKASLVLLDVSGNCLDAIP--AQILRNA 198
Query: 182 PALAVLNLSNNLMSK----EVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHL 237
L L+L +N +S+ E+ LP L+ +R+ ++ M ++P L+ L+L
Sbjct: 199 ANLMYLDLGSNNISEINNFELMNLPFLRELRVQNNTLRRIHPMAFM----NVPQLQYLYL 254
Query: 238 MGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI 297
N IS + +QGF NL++L++ +N + + L + +L+Q+ ++ N + +I
Sbjct: 255 QDNIISTL---DGNRLQGFKNLEVLDVSNNALYA---LPSLKDLPNLKQVRVDGNLITKI 308
Query: 298 Y---YPNNDTIHELVSAHESH-----EESYLPFQNLCCLLLGNNMIEDLASIDS--LDSF 347
+ NN + +L+S ++ S+ L LL+GNN LA I+ D
Sbjct: 309 ETLAFSNNPNL-QLISVQNNNIVQISRNSFESLDKLVVLLVGNN---SLAKIERGMFDGM 364
Query: 348 PKLMDIRLSENPVSDPGRGGISRFAIIARL 377
L + + N ++ ++ A + L
Sbjct: 365 KNLQQLSIRNNTLTALDASSFAQLAHLTTL 394
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.134 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 390 390 0.00094 117 3 11 22 0.44 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 145
No. of states in DFA: 614 (65 KB)
Total size of DFA: 255 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.01u 0.09s 38.10t Elapsed: 00:00:02
Total cpu time: 38.04u 0.09s 38.13t Elapsed: 00:00:02
Start: Sat May 11 02:49:30 2013 End: Sat May 11 02:49:32 2013
WARNINGS ISSUED: 1