Query 016363
Match_columns 390
No_of_seqs 131 out of 1510
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 06:11:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016363.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016363hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 1.7E-65 3.7E-70 462.4 33.2 365 14-386 1-366 (366)
2 COG1064 AdhP Zn-dependent alco 100.0 9.7E-65 2.1E-69 467.8 34.3 335 13-387 1-338 (339)
3 KOG0022 Alcohol dehydrogenase, 100.0 2.9E-64 6.3E-69 447.0 34.6 373 10-386 2-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 2.5E-59 5.5E-64 418.7 30.5 346 13-388 2-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 3.7E-57 8E-62 403.7 31.7 349 8-388 2-356 (360)
6 PLN02740 Alcohol dehydrogenase 100.0 1.3E-54 2.7E-59 421.7 38.1 377 7-386 2-381 (381)
7 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.7E-53 3.8E-58 411.9 39.0 367 16-386 2-368 (368)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 2E-53 4.3E-58 412.1 38.4 360 16-383 1-370 (371)
9 cd08300 alcohol_DH_class_III c 100.0 4.7E-53 1E-57 409.0 39.2 368 14-385 1-368 (368)
10 cd08301 alcohol_DH_plants Plan 100.0 5.5E-53 1.2E-57 408.9 39.5 368 14-384 1-368 (369)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 5.4E-53 1.2E-57 407.3 37.5 354 15-385 1-357 (358)
12 PLN02827 Alcohol dehydrogenase 100.0 8.7E-52 1.9E-56 401.0 39.0 373 7-387 4-377 (378)
13 cd08239 THR_DH_like L-threonin 100.0 1.1E-51 2.4E-56 395.3 37.3 338 16-386 1-339 (339)
14 cd08277 liver_alcohol_DH_like 100.0 1.7E-50 3.8E-55 390.7 39.0 365 14-385 1-365 (365)
15 PRK09880 L-idonate 5-dehydroge 100.0 3.1E-50 6.7E-55 385.8 35.9 338 14-386 3-343 (343)
16 COG0604 Qor NADPH:quinone redu 100.0 1.6E-49 3.4E-54 375.2 33.2 316 16-386 1-326 (326)
17 COG1063 Tdh Threonine dehydrog 100.0 2.3E-49 4.9E-54 378.8 34.4 343 16-386 1-350 (350)
18 TIGR02819 fdhA_non_GSH formald 100.0 3.3E-49 7.2E-54 383.8 35.7 346 15-387 2-391 (393)
19 PLN02586 probable cinnamyl alc 100.0 6.9E-49 1.5E-53 378.4 37.1 345 6-388 3-355 (360)
20 PRK10309 galactitol-1-phosphat 100.0 5.1E-48 1.1E-52 371.1 36.6 338 16-386 1-346 (347)
21 TIGR03201 dearomat_had 6-hydro 100.0 1.2E-47 2.6E-52 368.8 35.7 334 19-386 2-349 (349)
22 PLN02178 cinnamyl-alcohol dehy 100.0 1.9E-47 4.1E-52 369.7 36.7 334 18-389 9-351 (375)
23 cd08299 alcohol_DH_class_I_II_ 100.0 1.7E-46 3.8E-51 363.5 40.3 369 12-386 4-373 (373)
24 cd08230 glucose_DH Glucose deh 100.0 3.6E-47 7.7E-52 366.4 34.5 336 16-386 1-355 (355)
25 cd08231 MDR_TM0436_like Hypoth 100.0 2E-46 4.4E-51 362.0 37.0 348 17-386 2-361 (361)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.3E-46 2.8E-51 358.4 34.4 320 19-384 2-328 (329)
27 KOG1197 Predicted quinone oxid 100.0 3.2E-47 6.9E-52 328.5 26.3 320 10-389 3-333 (336)
28 cd08233 butanediol_DH_like (2R 100.0 3.9E-46 8.5E-51 358.6 36.6 337 16-385 1-351 (351)
29 PLN02514 cinnamyl-alcohol dehy 100.0 1.1E-45 2.3E-50 356.1 37.0 341 14-388 8-352 (357)
30 cd05279 Zn_ADH1 Liver alcohol 100.0 2.4E-45 5.3E-50 354.8 38.2 362 16-385 1-365 (365)
31 cd08278 benzyl_alcohol_DH Benz 100.0 2.8E-45 6.1E-50 354.4 37.7 363 14-385 1-365 (365)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 1.7E-44 3.6E-49 347.3 36.2 342 16-386 1-351 (351)
33 cd08237 ribitol-5-phosphate_DH 100.0 6.3E-45 1.4E-49 348.6 30.3 323 15-387 2-340 (341)
34 PRK10083 putative oxidoreducta 100.0 1.1E-43 2.5E-48 339.8 36.1 334 16-388 1-339 (339)
35 cd08279 Zn_ADH_class_III Class 100.0 3.3E-43 7E-48 339.8 38.8 360 16-384 1-362 (363)
36 cd08238 sorbose_phosphate_red 100.0 9.5E-44 2.1E-48 348.5 35.1 335 14-388 1-370 (410)
37 cd08296 CAD_like Cinnamyl alco 100.0 2.8E-43 6.2E-48 336.3 36.5 330 16-385 1-333 (333)
38 cd08256 Zn_ADH2 Alcohol dehydr 100.0 6.5E-43 1.4E-47 336.1 35.7 336 16-384 1-350 (350)
39 cd05278 FDH_like Formaldehyde 100.0 1.2E-42 2.6E-47 333.6 35.5 341 16-386 1-347 (347)
40 cd05284 arabinose_DH_like D-ar 100.0 1.6E-42 3.6E-47 331.9 36.1 334 16-386 1-340 (340)
41 cd08283 FDH_like_1 Glutathione 100.0 2.8E-42 6.1E-47 335.7 36.9 353 16-386 1-386 (386)
42 cd08286 FDH_like_ADH2 formalde 100.0 5E-42 1.1E-46 329.3 35.6 337 16-386 1-345 (345)
43 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.3E-41 2.7E-46 326.5 37.1 339 16-385 1-344 (345)
44 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.7E-42 5.8E-47 325.8 31.0 304 15-385 1-308 (308)
45 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.4E-41 3E-46 326.9 35.4 338 16-385 1-349 (350)
46 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.3E-41 5.1E-46 327.4 36.5 360 16-385 1-367 (367)
47 cd08246 crotonyl_coA_red croto 100.0 3E-41 6.5E-46 329.5 36.1 348 7-384 4-391 (393)
48 cd08287 FDH_like_ADH3 formalde 100.0 9.7E-41 2.1E-45 320.3 36.4 335 16-386 1-345 (345)
49 cd08284 FDH_like_2 Glutathione 100.0 1.1E-40 2.3E-45 319.8 36.3 338 16-385 1-343 (344)
50 PRK05396 tdh L-threonine 3-deh 100.0 9.1E-41 2E-45 320.1 35.5 339 16-387 1-341 (341)
51 cd08291 ETR_like_1 2-enoyl thi 100.0 5.4E-41 1.2E-45 319.4 32.0 310 16-385 1-324 (324)
52 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2.7E-40 5.9E-45 316.2 36.9 333 16-386 1-337 (337)
53 cd08282 PFDH_like Pseudomonas 100.0 1.9E-40 4E-45 321.9 36.1 346 16-386 1-375 (375)
54 PRK13771 putative alcohol dehy 100.0 1.1E-40 2.5E-45 318.4 33.7 330 16-386 1-333 (334)
55 PLN02702 L-idonate 5-dehydroge 100.0 3.7E-40 7.9E-45 318.7 37.1 340 14-385 16-363 (364)
56 cd08235 iditol_2_DH_like L-idi 100.0 3.1E-40 6.7E-45 316.5 36.3 336 16-385 1-343 (343)
57 cd05283 CAD1 Cinnamyl alcohol 100.0 2E-40 4.3E-45 317.3 34.7 334 17-385 1-337 (337)
58 TIGR01751 crot-CoA-red crotony 100.0 3.3E-40 7.2E-45 322.5 35.6 347 11-387 3-388 (398)
59 cd08262 Zn_ADH8 Alcohol dehydr 100.0 3.9E-40 8.5E-45 315.6 35.3 325 16-385 1-341 (341)
60 PLN03154 putative allyl alcoho 100.0 2.9E-40 6.4E-45 317.0 34.1 318 10-388 3-347 (348)
61 cd05285 sorbitol_DH Sorbitol d 100.0 4.6E-40 1E-44 315.4 34.7 333 18-384 1-341 (343)
62 PRK09422 ethanol-active dehydr 100.0 1.2E-39 2.6E-44 311.8 36.7 333 16-387 1-337 (338)
63 cd08297 CAD3 Cinnamyl alcohol 100.0 1.9E-39 4.1E-44 310.8 37.3 335 16-386 1-341 (341)
64 cd08265 Zn_ADH3 Alcohol dehydr 100.0 6.5E-40 1.4E-44 319.0 34.4 338 16-384 29-383 (384)
65 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.8E-39 3.8E-44 310.3 35.9 334 16-386 1-338 (338)
66 cd05281 TDH Threonine dehydrog 100.0 1.3E-39 2.8E-44 312.1 34.8 339 16-386 1-341 (341)
67 cd08236 sugar_DH NAD(P)-depend 100.0 2.1E-39 4.5E-44 310.8 35.9 336 16-384 1-343 (343)
68 cd08242 MDR_like Medium chain 100.0 2.2E-39 4.7E-44 307.6 34.3 316 16-386 1-319 (319)
69 cd08292 ETR_like_2 2-enoyl thi 100.0 1.6E-39 3.4E-44 308.9 32.4 310 16-385 1-324 (324)
70 TIGR03366 HpnZ_proposed putati 100.0 2.4E-40 5.2E-45 308.5 26.1 269 74-367 1-280 (280)
71 cd08232 idonate-5-DH L-idonate 100.0 4.4E-39 9.6E-44 308.0 34.6 333 20-386 2-339 (339)
72 cd08266 Zn_ADH_like1 Alcohol d 100.0 8.4E-39 1.8E-43 305.4 35.3 336 16-386 1-342 (342)
73 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.1E-38 2.3E-43 304.0 35.7 329 16-385 1-332 (332)
74 cd08295 double_bond_reductase_ 100.0 2.8E-39 6.2E-44 309.4 31.8 311 16-386 8-338 (338)
75 cd08234 threonine_DH_like L-th 100.0 1.4E-38 3E-43 303.9 35.8 330 16-384 1-333 (334)
76 cd08264 Zn_ADH_like2 Alcohol d 100.0 4.8E-39 1E-43 306.0 32.1 320 16-382 1-324 (325)
77 TIGR00692 tdh L-threonine 3-de 100.0 2.4E-38 5.2E-43 303.2 34.6 334 22-386 5-340 (340)
78 cd08298 CAD2 Cinnamyl alcohol 100.0 2.9E-38 6.4E-43 301.1 34.6 323 16-384 1-329 (329)
79 cd08293 PTGR2 Prostaglandin re 100.0 2.4E-38 5.3E-43 303.6 33.9 299 28-386 23-345 (345)
80 KOG0025 Zn2+-binding dehydroge 100.0 9.3E-39 2E-43 281.0 28.1 324 5-386 9-352 (354)
81 cd08294 leukotriene_B4_DH_like 100.0 3E-38 6.5E-43 300.8 32.4 304 15-386 2-329 (329)
82 TIGR02825 B4_12hDH leukotriene 100.0 3.2E-38 7E-43 300.5 31.5 291 28-385 19-325 (325)
83 cd08245 CAD Cinnamyl alcohol d 100.0 8.6E-38 1.9E-42 298.0 34.4 327 17-384 1-330 (330)
84 cd08274 MDR9 Medium chain dehy 100.0 6.8E-38 1.5E-42 301.0 33.7 325 16-386 1-350 (350)
85 cd08244 MDR_enoyl_red Possible 100.0 1.5E-36 3.3E-41 288.3 34.2 314 16-386 1-324 (324)
86 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.1E-36 2.4E-41 287.4 32.9 300 16-350 1-306 (306)
87 PRK10754 quinone oxidoreductas 100.0 7.3E-37 1.6E-41 291.2 30.8 314 15-386 1-327 (327)
88 cd08276 MDR7 Medium chain dehy 100.0 4.3E-36 9.2E-41 286.4 35.9 330 16-385 1-335 (336)
89 TIGR02817 adh_fam_1 zinc-bindi 100.0 1.1E-36 2.3E-41 291.1 31.4 308 17-385 1-334 (336)
90 cd08290 ETR 2-enoyl thioester 100.0 1.1E-36 2.4E-41 291.6 31.1 314 16-386 1-341 (341)
91 PTZ00354 alcohol dehydrogenase 100.0 3.6E-36 7.7E-41 286.9 33.7 315 15-388 1-330 (334)
92 cd08250 Mgc45594_like Mgc45594 100.0 2.6E-36 5.6E-41 287.6 32.0 312 15-385 1-329 (329)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.2E-35 2.7E-40 282.2 33.1 313 16-386 1-325 (325)
94 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.8E-35 6E-40 278.2 33.3 304 22-384 2-311 (312)
95 cd08249 enoyl_reductase_like e 100.0 1.2E-35 2.6E-40 284.4 30.7 315 16-386 1-339 (339)
96 cd05282 ETR_like 2-enoyl thioe 100.0 1.9E-35 4E-40 280.7 31.3 299 28-385 14-323 (323)
97 cd08270 MDR4 Medium chain dehy 100.0 3E-35 6.5E-40 277.2 31.7 297 16-386 1-305 (305)
98 KOG1198 Zinc-binding oxidoredu 100.0 7.5E-36 1.6E-40 282.2 26.4 303 28-387 20-346 (347)
99 cd08243 quinone_oxidoreductase 100.0 7.9E-35 1.7E-39 275.6 32.3 311 16-384 1-319 (320)
100 COG2130 Putative NADP-dependen 100.0 5.2E-35 1.1E-39 259.9 28.4 298 28-388 27-340 (340)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 1.3E-34 2.9E-39 275.4 32.5 315 16-386 1-326 (326)
102 TIGR02823 oxido_YhdH putative 100.0 2.4E-34 5.2E-39 273.3 33.8 311 17-385 1-322 (323)
103 cd08252 AL_MDR Arginate lyase 100.0 2.3E-34 5.1E-39 274.9 31.7 312 16-385 1-336 (336)
104 cd08253 zeta_crystallin Zeta-c 100.0 1.3E-33 2.8E-38 267.3 33.5 316 16-386 1-325 (325)
105 cd05286 QOR2 Quinone oxidoredu 100.0 2.9E-33 6.2E-38 264.1 33.4 309 17-386 1-320 (320)
106 cd08248 RTN4I1 Human Reticulon 100.0 3.5E-34 7.7E-39 275.2 27.1 313 16-385 1-350 (350)
107 cd05276 p53_inducible_oxidored 100.0 2.2E-33 4.8E-38 265.2 32.0 310 16-384 1-323 (323)
108 cd08288 MDR_yhdh Yhdh putative 100.0 3.6E-33 7.7E-38 265.3 32.7 313 16-386 1-324 (324)
109 cd08272 MDR6 Medium chain dehy 100.0 4.4E-33 9.5E-38 264.1 31.7 312 16-386 1-326 (326)
110 cd08271 MDR5 Medium chain dehy 100.0 8.4E-33 1.8E-37 262.3 31.2 310 16-386 1-325 (325)
111 cd08273 MDR8 Medium chain dehy 100.0 7.3E-33 1.6E-37 263.9 30.6 306 17-384 2-330 (331)
112 cd05188 MDR Medium chain reduc 100.0 4E-33 8.6E-38 257.5 28.0 269 42-346 1-270 (271)
113 cd08247 AST1_like AST1 is a cy 100.0 1.3E-32 2.8E-37 264.8 32.0 317 16-386 1-352 (352)
114 cd05288 PGDH Prostaglandin deh 100.0 1.2E-32 2.5E-37 262.4 30.5 295 28-384 20-329 (329)
115 TIGR02824 quinone_pig3 putativ 100.0 3.3E-32 7.3E-37 257.8 32.5 312 16-386 1-325 (325)
116 cd08268 MDR2 Medium chain dehy 100.0 5.4E-32 1.2E-36 256.7 33.7 317 16-386 1-328 (328)
117 cd08251 polyketide_synthase po 100.0 5.6E-32 1.2E-36 253.9 29.8 293 35-384 2-303 (303)
118 cd05289 MDR_like_2 alcohol deh 100.0 7.7E-32 1.7E-36 253.5 28.3 302 16-383 1-308 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 3E-31 6.5E-36 250.9 32.1 310 16-385 1-323 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 1.2E-30 2.6E-35 248.8 33.6 311 17-386 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 1.6E-30 3.4E-35 246.1 28.2 296 29-383 15-318 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.3E-30 2.8E-35 242.5 27.1 282 41-384 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 4.3E-30 9.3E-35 238.8 26.7 276 45-383 2-287 (288)
124 KOG1196 Predicted NAD-dependen 100.0 6.3E-28 1.4E-32 214.1 28.1 295 32-388 28-342 (343)
125 KOG1202 Animal-type fatty acid 100.0 1.5E-28 3.2E-33 247.4 18.9 295 28-387 1429-1742(2376)
126 cd08255 2-desacetyl-2-hydroxye 100.0 2E-27 4.4E-32 220.9 24.7 245 70-384 19-277 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.9 9E-23 2E-27 162.4 8.4 108 40-171 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 6.6E-17 1.4E-21 132.8 14.2 128 213-349 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 2.3E-12 5.1E-17 124.3 16.4 177 190-388 188-378 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 5.9E-11 1.3E-15 117.4 15.5 155 200-359 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.2 6.5E-12 1.4E-16 102.5 4.7 119 246-384 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 4.3E-07 9.3E-12 84.2 11.0 163 197-374 72-246 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.4 1.7E-06 3.7E-11 85.8 11.9 127 201-330 162-312 (511)
134 TIGR01035 hemA glutamyl-tRNA r 98.3 4.1E-08 9E-13 96.3 -3.2 160 74-286 89-253 (417)
135 PRK05476 S-adenosyl-L-homocyst 98.3 1.6E-05 3.4E-10 77.5 13.5 103 190-308 198-302 (425)
136 TIGR00936 ahcY adenosylhomocys 98.2 2.8E-05 6.1E-10 75.3 13.1 102 190-307 181-284 (406)
137 PRK08306 dipicolinate synthase 98.1 4.1E-05 8.9E-10 71.7 13.2 96 202-310 151-246 (296)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.0 1.7E-05 3.6E-10 75.0 8.2 109 166-286 139-251 (311)
139 PLN02494 adenosylhomocysteinas 98.0 6.5E-05 1.4E-09 73.5 12.1 101 191-307 241-343 (477)
140 PRK00517 prmA ribosomal protei 97.9 0.00021 4.5E-09 65.4 13.6 127 156-306 78-214 (250)
141 TIGR02853 spore_dpaA dipicolin 97.7 0.00037 8.1E-09 64.9 11.9 94 202-308 150-243 (287)
142 TIGR00518 alaDH alanine dehydr 97.7 0.00036 7.8E-09 67.5 11.2 99 202-309 166-271 (370)
143 PRK08324 short chain dehydroge 97.7 0.00024 5.1E-09 74.5 10.7 137 156-307 386-559 (681)
144 PTZ00075 Adenosylhomocysteinas 97.7 0.00051 1.1E-08 67.5 12.1 100 192-307 242-343 (476)
145 PF11017 DUF2855: Protein of u 97.7 0.0025 5.4E-08 59.4 15.6 139 156-308 90-234 (314)
146 PRK12771 putative glutamate sy 97.6 0.00011 2.4E-09 75.3 6.6 81 199-285 133-234 (564)
147 COG2518 Pcm Protein-L-isoaspar 97.6 0.00077 1.7E-08 58.9 10.2 109 183-305 55-169 (209)
148 COG4221 Short-chain alcohol de 97.5 0.00047 1E-08 61.3 8.6 79 202-283 5-91 (246)
149 PF01488 Shikimate_DH: Shikima 97.5 0.00043 9.3E-09 56.9 7.3 97 200-306 9-110 (135)
150 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.0016 3.4E-08 58.7 11.7 104 202-307 4-137 (238)
151 PRK00045 hemA glutamyl-tRNA re 97.4 0.00055 1.2E-08 67.6 9.0 160 74-285 91-254 (423)
152 COG0300 DltE Short-chain dehyd 97.4 0.0027 5.9E-08 57.9 12.6 80 201-284 4-95 (265)
153 PRK06182 short chain dehydroge 97.3 0.0018 3.9E-08 59.8 10.7 79 202-283 2-84 (273)
154 TIGR00406 prmA ribosomal prote 97.3 0.0018 4E-08 60.5 10.3 96 200-306 157-260 (288)
155 PRK05693 short chain dehydroge 97.3 0.0025 5.3E-08 58.9 11.1 77 204-283 2-82 (274)
156 KOG1205 Predicted dehydrogenas 97.2 0.0045 9.7E-08 57.0 11.3 113 202-315 11-159 (282)
157 PF13460 NAD_binding_10: NADH( 97.2 0.004 8.7E-08 53.7 10.3 94 206-308 1-100 (183)
158 PRK00377 cbiT cobalt-precorrin 97.1 0.0074 1.6E-07 53.0 11.8 101 196-303 34-143 (198)
159 PRK13943 protein-L-isoaspartat 97.1 0.0062 1.4E-07 57.6 11.4 101 195-303 73-178 (322)
160 KOG1209 1-Acyl dihydroxyaceton 97.1 0.0036 7.9E-08 54.3 8.8 81 202-283 6-91 (289)
161 PF02826 2-Hacid_dh_C: D-isome 97.1 0.004 8.7E-08 53.8 9.3 89 201-305 34-127 (178)
162 COG1748 LYS9 Saccharopine dehy 97.1 0.0075 1.6E-07 58.0 11.7 96 204-307 2-101 (389)
163 COG3967 DltE Short-chain dehyd 97.0 0.0034 7.4E-08 54.3 8.3 78 202-283 4-88 (245)
164 PRK11705 cyclopropane fatty ac 97.0 0.005 1.1E-07 59.8 10.7 108 187-305 152-267 (383)
165 PRK05993 short chain dehydroge 97.0 0.0044 9.6E-08 57.4 9.9 79 202-283 3-86 (277)
166 PRK04148 hypothetical protein; 97.0 0.0036 7.9E-08 50.9 7.9 90 198-297 12-101 (134)
167 PRK08177 short chain dehydroge 97.0 0.0039 8.5E-08 55.7 8.8 77 204-283 2-81 (225)
168 PRK07326 short chain dehydroge 96.9 0.012 2.6E-07 52.8 11.2 81 202-283 5-92 (237)
169 PRK12742 oxidoreductase; Provi 96.8 0.027 5.8E-07 50.6 13.0 77 202-283 5-85 (237)
170 PRK06949 short chain dehydroge 96.8 0.0055 1.2E-07 55.9 8.5 82 201-283 7-96 (258)
171 COG2242 CobL Precorrin-6B meth 96.8 0.017 3.7E-07 49.5 10.8 103 196-306 28-136 (187)
172 PLN03209 translocon at the inn 96.8 0.017 3.7E-07 58.4 12.5 107 196-308 73-210 (576)
173 PRK14967 putative methyltransf 96.8 0.069 1.5E-06 47.8 15.4 98 196-304 30-158 (223)
174 PRK06139 short chain dehydroge 96.8 0.0057 1.2E-07 58.3 8.8 79 202-283 6-94 (330)
175 PRK07806 short chain dehydroge 96.8 0.018 3.9E-07 52.1 11.8 101 202-306 5-135 (248)
176 PRK07576 short chain dehydroge 96.8 0.015 3.2E-07 53.5 11.2 80 202-282 8-95 (264)
177 TIGR00438 rrmJ cell division p 96.8 0.022 4.7E-07 49.6 11.5 101 197-305 27-146 (188)
178 PRK08265 short chain dehydroge 96.8 0.016 3.6E-07 53.0 11.2 79 202-283 5-90 (261)
179 PRK12829 short chain dehydroge 96.8 0.0063 1.4E-07 55.6 8.4 87 197-284 5-97 (264)
180 PRK06057 short chain dehydroge 96.7 0.0064 1.4E-07 55.4 8.3 79 202-283 6-89 (255)
181 PRK06718 precorrin-2 dehydroge 96.7 0.05 1.1E-06 48.0 13.3 93 202-307 9-102 (202)
182 PRK08017 oxidoreductase; Provi 96.7 0.0098 2.1E-07 54.1 9.1 77 204-283 3-84 (256)
183 PRK12939 short chain dehydroge 96.7 0.021 4.6E-07 51.6 11.3 81 202-283 6-94 (250)
184 TIGR02469 CbiT precorrin-6Y C5 96.7 0.028 6.1E-07 44.7 10.8 102 195-305 12-122 (124)
185 PRK06500 short chain dehydroge 96.7 0.023 5.1E-07 51.3 11.4 81 202-283 5-90 (249)
186 PRK07109 short chain dehydroge 96.7 0.019 4.1E-07 54.8 11.2 79 202-283 7-95 (334)
187 PRK06719 precorrin-2 dehydroge 96.6 0.047 1E-06 46.0 12.0 89 202-305 12-100 (157)
188 PRK07060 short chain dehydroge 96.6 0.015 3.3E-07 52.4 9.7 77 202-283 8-87 (245)
189 PRK06200 2,3-dihydroxy-2,3-dih 96.6 0.0098 2.1E-07 54.5 8.5 81 202-283 5-90 (263)
190 COG0686 Ald Alanine dehydrogen 96.6 0.0099 2.1E-07 54.7 8.1 98 203-309 168-272 (371)
191 PRK07825 short chain dehydroge 96.6 0.011 2.3E-07 54.6 8.6 78 203-283 5-88 (273)
192 PRK08628 short chain dehydroge 96.6 0.028 6.1E-07 51.2 11.4 81 202-283 6-93 (258)
193 PRK13940 glutamyl-tRNA reducta 96.6 0.015 3.1E-07 57.1 9.7 99 198-307 176-275 (414)
194 cd01080 NAD_bind_m-THF_DH_Cycl 96.5 0.023 5E-07 48.4 9.7 98 180-308 21-119 (168)
195 PRK05872 short chain dehydroge 96.5 0.011 2.4E-07 55.3 8.5 79 202-283 8-95 (296)
196 PRK07814 short chain dehydroge 96.5 0.012 2.6E-07 54.0 8.5 79 202-283 9-97 (263)
197 PRK05866 short chain dehydroge 96.5 0.013 2.9E-07 54.8 8.8 81 202-283 39-127 (293)
198 TIGR01470 cysG_Nterm siroheme 96.5 0.081 1.7E-06 46.7 13.1 94 202-307 8-102 (205)
199 PRK12828 short chain dehydroge 96.5 0.013 2.9E-07 52.5 8.4 79 202-283 6-92 (239)
200 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.029 6.3E-07 55.9 11.5 80 201-283 208-294 (450)
201 PRK06841 short chain dehydroge 96.5 0.013 2.9E-07 53.2 8.4 81 202-283 14-99 (255)
202 TIGR03325 BphB_TodD cis-2,3-di 96.4 0.013 2.7E-07 53.8 8.2 78 202-282 4-88 (262)
203 CHL00194 ycf39 Ycf39; Provisio 96.4 0.03 6.5E-07 53.0 11.0 94 205-306 2-110 (317)
204 PRK05867 short chain dehydroge 96.4 0.014 3E-07 53.1 8.4 79 202-283 8-96 (253)
205 PRK06196 oxidoreductase; Provi 96.4 0.016 3.5E-07 54.8 8.9 79 202-283 25-109 (315)
206 PRK09291 short chain dehydroge 96.4 0.02 4.2E-07 52.2 9.2 74 203-283 2-83 (257)
207 PF12847 Methyltransf_18: Meth 96.4 0.015 3.2E-07 45.7 7.3 92 202-303 1-109 (112)
208 PRK06180 short chain dehydroge 96.4 0.015 3.2E-07 53.9 8.4 79 202-283 3-88 (277)
209 PF00670 AdoHcyase_NAD: S-aden 96.4 0.042 9.2E-07 46.2 10.1 99 191-305 10-110 (162)
210 PRK12549 shikimate 5-dehydroge 96.4 0.034 7.4E-07 51.8 10.7 73 201-283 125-202 (284)
211 PRK07231 fabG 3-ketoacyl-(acyl 96.4 0.016 3.4E-07 52.5 8.3 81 202-283 4-91 (251)
212 PRK03369 murD UDP-N-acetylmura 96.4 0.017 3.7E-07 58.2 9.2 75 199-285 8-82 (488)
213 PRK12429 3-hydroxybutyrate deh 96.4 0.037 7.9E-07 50.3 10.7 81 202-283 3-91 (258)
214 PF01262 AlaDh_PNT_C: Alanine 96.4 0.012 2.5E-07 50.4 6.9 103 203-308 20-142 (168)
215 TIGR01832 kduD 2-deoxy-D-gluco 96.4 0.022 4.8E-07 51.5 9.2 81 202-283 4-90 (248)
216 PRK07904 short chain dehydroge 96.3 0.024 5.3E-07 51.7 9.4 83 200-283 5-97 (253)
217 PRK07677 short chain dehydroge 96.3 0.016 3.4E-07 52.8 8.1 80 203-283 1-88 (252)
218 PF13241 NAD_binding_7: Putati 96.3 0.0078 1.7E-07 46.9 5.1 90 202-309 6-95 (103)
219 PRK08339 short chain dehydroge 96.3 0.023 5.1E-07 52.2 9.1 81 202-283 7-95 (263)
220 PRK06953 short chain dehydroge 96.3 0.024 5.1E-07 50.5 8.9 77 204-283 2-80 (222)
221 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.023 5E-07 51.4 8.9 80 202-282 4-91 (253)
222 PRK06484 short chain dehydroge 96.3 0.04 8.7E-07 55.9 11.5 103 201-307 267-402 (520)
223 PRK07478 short chain dehydroge 96.3 0.021 4.6E-07 51.9 8.6 81 202-283 5-93 (254)
224 PRK06398 aldose dehydrogenase; 96.2 0.03 6.5E-07 51.2 9.5 75 202-283 5-82 (258)
225 PRK07062 short chain dehydroge 96.2 0.019 4.2E-07 52.5 8.3 79 202-283 7-97 (265)
226 PF02353 CMAS: Mycolic acid cy 96.2 0.024 5.1E-07 52.5 8.7 100 194-306 54-167 (273)
227 PRK07831 short chain dehydroge 96.2 0.024 5.1E-07 51.9 8.7 82 199-283 13-107 (262)
228 PRK13944 protein-L-isoaspartat 96.2 0.044 9.4E-07 48.4 10.0 100 195-304 65-172 (205)
229 PRK06505 enoyl-(acyl carrier p 96.2 0.023 5E-07 52.5 8.6 81 202-283 6-95 (271)
230 PRK13942 protein-L-isoaspartat 96.2 0.081 1.8E-06 47.0 11.7 100 194-304 68-175 (212)
231 PRK07832 short chain dehydroge 96.2 0.049 1.1E-06 50.1 10.7 76 205-283 2-88 (272)
232 PRK08219 short chain dehydroge 96.2 0.045 9.8E-07 48.6 10.0 74 204-283 4-81 (227)
233 PRK07454 short chain dehydroge 96.2 0.031 6.7E-07 50.4 9.0 81 202-283 5-93 (241)
234 TIGR02356 adenyl_thiF thiazole 96.1 0.054 1.2E-06 47.8 10.1 35 202-236 20-54 (202)
235 PLN02780 ketoreductase/ oxidor 96.1 0.023 5.1E-07 53.9 8.4 80 202-283 52-142 (320)
236 PRK07523 gluconate 5-dehydroge 96.1 0.027 5.8E-07 51.3 8.6 79 202-283 9-97 (255)
237 COG2910 Putative NADH-flavin r 96.1 0.04 8.7E-07 47.0 8.6 95 205-308 2-107 (211)
238 PRK05717 oxidoreductase; Valid 96.1 0.028 6.1E-07 51.2 8.6 81 202-283 9-94 (255)
239 COG0031 CysK Cysteine synthase 96.1 0.18 3.9E-06 46.8 13.7 59 196-255 55-116 (300)
240 PRK08340 glucose-1-dehydrogena 96.1 0.029 6.3E-07 51.3 8.6 78 205-283 2-86 (259)
241 cd05311 NAD_bind_2_malic_enz N 96.1 0.09 1.9E-06 47.2 11.5 92 201-305 23-128 (226)
242 PRK06128 oxidoreductase; Provi 96.1 0.073 1.6E-06 49.9 11.5 81 202-283 54-144 (300)
243 PRK07063 short chain dehydroge 96.1 0.028 6.1E-07 51.3 8.4 81 202-283 6-96 (260)
244 PRK07533 enoyl-(acyl carrier p 96.1 0.03 6.6E-07 51.2 8.6 81 202-283 9-98 (258)
245 PRK05875 short chain dehydroge 96.1 0.031 6.7E-07 51.6 8.7 81 202-283 6-96 (276)
246 PRK07890 short chain dehydroge 96.1 0.032 6.9E-07 50.8 8.7 79 202-283 4-92 (258)
247 PRK06138 short chain dehydroge 96.0 0.032 6.9E-07 50.5 8.6 81 202-283 4-91 (252)
248 PRK06179 short chain dehydroge 96.0 0.015 3.3E-07 53.5 6.4 77 202-283 3-83 (270)
249 PF01135 PCMT: Protein-L-isoas 96.0 0.018 3.8E-07 51.0 6.4 101 194-304 64-171 (209)
250 PRK08213 gluconate 5-dehydroge 96.0 0.035 7.6E-07 50.6 8.7 81 202-283 11-99 (259)
251 PRK06172 short chain dehydroge 96.0 0.033 7.2E-07 50.6 8.5 81 202-283 6-94 (253)
252 COG1179 Dinucleotide-utilizing 96.0 0.11 2.3E-06 46.4 11.0 103 202-308 29-156 (263)
253 PRK06181 short chain dehydroge 96.0 0.036 7.8E-07 50.7 8.7 80 203-283 1-88 (263)
254 PRK09072 short chain dehydroge 96.0 0.041 8.9E-07 50.4 9.1 81 202-283 4-90 (263)
255 PRK07035 short chain dehydroge 96.0 0.034 7.4E-07 50.4 8.5 81 202-283 7-95 (252)
256 PRK06194 hypothetical protein; 96.0 0.034 7.5E-07 51.6 8.7 81 202-283 5-93 (287)
257 PRK05653 fabG 3-ketoacyl-(acyl 96.0 0.04 8.6E-07 49.5 8.9 79 202-283 4-92 (246)
258 PRK08643 acetoin reductase; Va 96.0 0.034 7.4E-07 50.6 8.5 78 203-283 2-89 (256)
259 PRK08267 short chain dehydroge 96.0 0.035 7.6E-07 50.7 8.6 77 204-283 2-87 (260)
260 COG0373 HemA Glutamyl-tRNA red 96.0 0.12 2.6E-06 50.2 12.3 101 196-307 171-276 (414)
261 PRK06914 short chain dehydroge 96.0 0.034 7.3E-07 51.4 8.5 77 203-283 3-91 (280)
262 PRK06482 short chain dehydroge 96.0 0.035 7.5E-07 51.2 8.6 77 204-283 3-86 (276)
263 cd01075 NAD_bind_Leu_Phe_Val_D 96.0 0.09 1.9E-06 46.3 10.7 81 201-295 26-107 (200)
264 PRK08594 enoyl-(acyl carrier p 96.0 0.097 2.1E-06 47.9 11.4 78 202-282 6-96 (257)
265 PRK07774 short chain dehydroge 96.0 0.038 8.3E-07 50.0 8.7 81 202-283 5-93 (250)
266 cd01078 NAD_bind_H4MPT_DH NADP 96.0 0.078 1.7E-06 46.3 10.3 76 202-285 27-109 (194)
267 PRK07024 short chain dehydroge 95.9 0.04 8.6E-07 50.3 8.8 80 203-283 2-88 (257)
268 cd00755 YgdL_like Family of ac 95.9 0.093 2E-06 47.2 10.8 100 203-305 11-134 (231)
269 TIGR03206 benzo_BadH 2-hydroxy 95.9 0.039 8.5E-07 49.9 8.6 80 202-282 2-89 (250)
270 TIGR01809 Shik-DH-AROM shikima 95.9 0.031 6.8E-07 52.0 8.0 77 202-285 124-202 (282)
271 PRK06603 enoyl-(acyl carrier p 95.9 0.038 8.2E-07 50.6 8.5 79 202-283 7-96 (260)
272 cd01065 NAD_bind_Shikimate_DH 95.9 0.05 1.1E-06 45.4 8.6 94 201-305 17-116 (155)
273 PRK12550 shikimate 5-dehydroge 95.9 0.062 1.3E-06 49.6 9.8 72 198-284 117-189 (272)
274 PRK08862 short chain dehydroge 95.9 0.044 9.4E-07 49.2 8.6 80 202-282 4-92 (227)
275 PRK12481 2-deoxy-D-gluconate 3 95.9 0.041 8.9E-07 50.1 8.6 81 202-283 7-93 (251)
276 PRK05854 short chain dehydroge 95.9 0.042 9.2E-07 51.9 8.9 79 202-283 13-103 (313)
277 PRK14175 bifunctional 5,10-met 95.9 0.08 1.7E-06 49.0 10.3 94 182-307 137-232 (286)
278 PRK06483 dihydromonapterin red 95.9 0.051 1.1E-06 48.8 9.1 78 203-283 2-84 (236)
279 PRK08589 short chain dehydroge 95.9 0.037 8.1E-07 51.0 8.3 78 202-283 5-92 (272)
280 PRK12384 sorbitol-6-phosphate 95.9 0.036 7.8E-07 50.5 8.2 80 203-283 2-91 (259)
281 PRK08264 short chain dehydroge 95.9 0.037 8.1E-07 49.7 8.2 75 202-283 5-83 (238)
282 PRK13394 3-hydroxybutyrate deh 95.9 0.044 9.6E-07 49.9 8.8 81 202-283 6-94 (262)
283 PRK06197 short chain dehydroge 95.9 0.043 9.3E-07 51.6 8.9 81 202-283 15-105 (306)
284 PRK08277 D-mannonate oxidoredu 95.9 0.041 8.9E-07 50.8 8.6 80 202-282 9-96 (278)
285 PRK07502 cyclohexadienyl dehyd 95.9 0.085 1.8E-06 49.7 10.8 91 204-306 7-101 (307)
286 COG0169 AroE Shikimate 5-dehyd 95.9 0.022 4.7E-07 52.7 6.5 76 201-285 124-202 (283)
287 PRK08251 short chain dehydroge 95.9 0.048 1E-06 49.3 8.8 77 203-282 2-90 (248)
288 PRK09186 flagellin modificatio 95.8 0.043 9.3E-07 49.9 8.5 78 202-282 3-92 (256)
289 PRK08263 short chain dehydroge 95.8 0.044 9.4E-07 50.6 8.6 80 203-283 3-87 (275)
290 PRK08618 ornithine cyclodeamin 95.8 0.17 3.6E-06 48.2 12.6 96 199-308 123-224 (325)
291 PRK07067 sorbitol dehydrogenas 95.8 0.051 1.1E-06 49.5 8.9 81 202-283 5-90 (257)
292 PF03446 NAD_binding_2: NAD bi 95.8 0.15 3.3E-06 43.2 11.1 87 204-305 2-94 (163)
293 PRK15116 sulfur acceptor prote 95.8 0.21 4.6E-06 45.9 12.7 103 202-307 29-155 (268)
294 PRK12937 short chain dehydroge 95.8 0.12 2.6E-06 46.5 11.3 81 202-283 4-93 (245)
295 PRK06198 short chain dehydroge 95.8 0.042 9.2E-07 50.1 8.3 81 201-283 4-94 (260)
296 PRK12823 benD 1,6-dihydroxycyc 95.8 0.038 8.1E-07 50.4 8.0 79 202-283 7-94 (260)
297 PRK08703 short chain dehydroge 95.8 0.053 1.1E-06 48.8 8.8 81 202-283 5-97 (239)
298 PF03435 Saccharop_dh: Sacchar 95.8 0.064 1.4E-06 52.3 9.9 91 206-304 1-97 (386)
299 PRK09242 tropinone reductase; 95.8 0.051 1.1E-06 49.5 8.8 79 202-283 8-98 (257)
300 PLN02253 xanthoxin dehydrogena 95.8 0.041 8.8E-07 50.9 8.2 79 202-283 17-104 (280)
301 PRK06125 short chain dehydroge 95.8 0.053 1.1E-06 49.5 8.8 79 202-283 6-91 (259)
302 PRK06114 short chain dehydroge 95.8 0.055 1.2E-06 49.2 8.9 81 202-283 7-96 (254)
303 PRK08085 gluconate 5-dehydroge 95.8 0.06 1.3E-06 48.9 9.1 81 202-283 8-96 (254)
304 PRK12367 short chain dehydroge 95.8 0.069 1.5E-06 48.6 9.4 75 202-283 13-89 (245)
305 PRK12809 putative oxidoreducta 95.7 0.055 1.2E-06 56.4 9.8 77 202-284 309-406 (639)
306 PRK08690 enoyl-(acyl carrier p 95.7 0.052 1.1E-06 49.8 8.6 81 202-283 5-94 (261)
307 cd01483 E1_enzyme_family Super 95.7 0.14 2.9E-06 42.4 10.4 32 205-236 1-32 (143)
308 TIGR01318 gltD_gamma_fam gluta 95.7 0.055 1.2E-06 54.2 9.4 78 202-285 140-238 (467)
309 PRK06079 enoyl-(acyl carrier p 95.7 0.053 1.1E-06 49.4 8.6 81 202-283 6-93 (252)
310 PRK00258 aroE shikimate 5-dehy 95.7 0.035 7.5E-07 51.6 7.4 95 201-305 121-221 (278)
311 PRK14027 quinate/shikimate deh 95.7 0.096 2.1E-06 48.7 10.3 44 201-244 125-168 (283)
312 PRK07453 protochlorophyllide o 95.7 0.051 1.1E-06 51.5 8.7 78 202-282 5-92 (322)
313 PRK07985 oxidoreductase; Provi 95.7 0.13 2.7E-06 48.2 11.2 102 202-307 48-187 (294)
314 PRK07574 formate dehydrogenase 95.7 0.11 2.3E-06 50.5 10.8 45 202-247 191-235 (385)
315 PRK08415 enoyl-(acyl carrier p 95.7 0.061 1.3E-06 49.8 8.9 102 202-307 4-145 (274)
316 PRK08993 2-deoxy-D-gluconate 3 95.7 0.064 1.4E-06 48.8 8.9 81 202-283 9-95 (253)
317 PRK06124 gluconate 5-dehydroge 95.7 0.063 1.4E-06 48.8 8.9 79 202-283 10-98 (256)
318 PRK07856 short chain dehydroge 95.7 0.044 9.6E-07 49.8 7.8 75 202-283 5-85 (252)
319 PRK08261 fabG 3-ketoacyl-(acyl 95.6 0.03 6.5E-07 55.8 7.1 93 196-307 27-125 (450)
320 PRK06940 short chain dehydroge 95.6 0.13 2.8E-06 47.5 11.0 77 203-283 2-86 (275)
321 PF02254 TrkA_N: TrkA-N domain 95.6 0.29 6.3E-06 38.6 11.6 74 206-285 1-74 (116)
322 PRK06101 short chain dehydroge 95.6 0.071 1.5E-06 48.1 9.0 75 204-282 2-80 (240)
323 PRK06701 short chain dehydroge 95.6 0.16 3.5E-06 47.3 11.6 84 199-283 42-134 (290)
324 PRK07402 precorrin-6B methylas 95.6 0.32 7E-06 42.5 12.8 103 195-305 33-142 (196)
325 PRK12826 3-ketoacyl-(acyl-carr 95.6 0.06 1.3E-06 48.6 8.5 81 202-283 5-93 (251)
326 PRK05876 short chain dehydroge 95.6 0.059 1.3E-06 49.9 8.5 81 202-283 5-93 (275)
327 PRK06720 hypothetical protein; 95.6 0.086 1.9E-06 45.0 8.8 81 202-283 15-103 (169)
328 TIGR01963 PHB_DH 3-hydroxybuty 95.6 0.059 1.3E-06 48.8 8.3 78 203-283 1-88 (255)
329 PRK07074 short chain dehydroge 95.6 0.064 1.4E-06 48.8 8.6 80 203-283 2-87 (257)
330 PRK08226 short chain dehydroge 95.6 0.067 1.4E-06 48.9 8.6 81 202-283 5-92 (263)
331 PRK08159 enoyl-(acyl carrier p 95.5 0.072 1.6E-06 49.2 8.8 83 200-283 7-98 (272)
332 PRK10538 malonic semialdehyde 95.5 0.068 1.5E-06 48.4 8.5 76 205-283 2-84 (248)
333 PRK07666 fabG 3-ketoacyl-(acyl 95.5 0.067 1.5E-06 48.1 8.4 81 202-283 6-94 (239)
334 COG2230 Cfa Cyclopropane fatty 95.5 0.093 2E-06 48.3 9.2 105 190-310 60-181 (283)
335 PRK05884 short chain dehydroge 95.5 0.076 1.6E-06 47.4 8.6 74 205-282 2-78 (223)
336 PF00106 adh_short: short chai 95.5 0.04 8.7E-07 46.4 6.4 80 204-283 1-90 (167)
337 PRK06077 fabG 3-ketoacyl-(acyl 95.5 0.23 5E-06 44.8 11.9 105 202-308 5-143 (252)
338 PRK08945 putative oxoacyl-(acy 95.5 0.084 1.8E-06 47.7 8.9 84 199-283 8-102 (247)
339 PRK00107 gidB 16S rRNA methylt 95.5 0.26 5.6E-06 42.8 11.4 98 198-305 41-145 (187)
340 TIGR00507 aroE shikimate 5-deh 95.5 0.11 2.4E-06 48.0 9.7 92 200-305 114-214 (270)
341 PRK12936 3-ketoacyl-(acyl-carr 95.5 0.081 1.7E-06 47.6 8.7 81 202-283 5-90 (245)
342 COG4122 Predicted O-methyltran 95.4 0.21 4.6E-06 44.3 10.9 107 194-305 51-166 (219)
343 PRK07984 enoyl-(acyl carrier p 95.4 0.088 1.9E-06 48.4 8.9 80 202-282 5-93 (262)
344 PLN00203 glutamyl-tRNA reducta 95.4 0.088 1.9E-06 53.1 9.4 73 203-285 266-341 (519)
345 TIGR02355 moeB molybdopterin s 95.4 0.11 2.4E-06 47.1 9.3 34 203-236 24-57 (240)
346 PLN03139 formate dehydrogenase 95.4 0.13 2.8E-06 49.9 10.2 45 202-247 198-242 (386)
347 PLN00141 Tic62-NAD(P)-related 95.4 0.083 1.8E-06 48.1 8.5 100 202-307 16-133 (251)
348 PRK12548 shikimate 5-dehydroge 95.4 0.14 3.1E-06 47.8 10.2 37 201-237 124-160 (289)
349 PF03807 F420_oxidored: NADP o 95.4 0.46 1E-05 36.0 11.5 85 205-304 1-93 (96)
350 PRK07577 short chain dehydroge 95.4 0.061 1.3E-06 48.1 7.5 74 202-283 2-78 (234)
351 PRK00811 spermidine synthase; 95.4 0.11 2.4E-06 48.3 9.4 96 201-305 75-191 (283)
352 PRK12747 short chain dehydroge 95.3 0.24 5.1E-06 44.9 11.5 38 202-240 3-42 (252)
353 PRK06849 hypothetical protein; 95.3 0.32 7E-06 47.4 13.1 95 202-297 3-100 (389)
354 TIGR00080 pimt protein-L-isoas 95.3 0.058 1.3E-06 48.0 7.1 101 194-304 69-176 (215)
355 PRK15469 ghrA bifunctional gly 95.3 0.13 2.8E-06 48.6 9.8 87 202-305 135-226 (312)
356 PLN02366 spermidine synthase 95.3 0.11 2.5E-06 48.8 9.4 98 200-305 89-206 (308)
357 PF05368 NmrA: NmrA-like famil 95.3 0.087 1.9E-06 47.3 8.3 71 206-283 1-74 (233)
358 PRK06935 2-deoxy-D-gluconate 3 95.3 0.085 1.8E-06 48.1 8.4 80 202-283 14-101 (258)
359 PRK12769 putative oxidoreducta 95.3 0.086 1.9E-06 55.2 9.4 78 201-284 325-423 (654)
360 PRK06113 7-alpha-hydroxysteroi 95.3 0.089 1.9E-06 47.9 8.5 79 202-283 10-98 (255)
361 PRK12475 thiamine/molybdopteri 95.3 0.14 3.1E-06 48.9 10.0 36 202-237 23-58 (338)
362 PRK11207 tellurite resistance 95.3 0.075 1.6E-06 46.6 7.5 99 196-305 24-134 (197)
363 PRK06463 fabG 3-ketoacyl-(acyl 95.3 0.093 2E-06 47.7 8.5 79 202-283 6-89 (255)
364 COG2264 PrmA Ribosomal protein 95.2 0.26 5.6E-06 45.8 11.2 138 156-307 120-265 (300)
365 TIGR02632 RhaD_aldol-ADH rhamn 95.2 0.076 1.7E-06 55.7 8.8 115 157-283 379-503 (676)
366 KOG1502 Flavonol reductase/cin 95.2 0.11 2.5E-06 48.7 8.9 75 202-282 5-87 (327)
367 PRK08317 hypothetical protein; 95.2 0.24 5.1E-06 44.3 10.9 102 194-305 11-124 (241)
368 PRK07102 short chain dehydroge 95.2 0.14 3E-06 46.2 9.4 78 204-283 2-86 (243)
369 PF00899 ThiF: ThiF family; I 95.2 0.092 2E-06 42.9 7.5 98 203-305 2-124 (135)
370 PRK07775 short chain dehydroge 95.2 0.098 2.1E-06 48.3 8.5 81 202-283 9-97 (274)
371 PLN02657 3,8-divinyl protochlo 95.2 0.092 2E-06 51.3 8.7 106 198-307 55-183 (390)
372 PRK13243 glyoxylate reductase; 95.2 0.22 4.7E-06 47.6 11.0 37 202-239 149-185 (333)
373 COG0569 TrkA K+ transport syst 95.2 0.17 3.7E-06 45.4 9.7 80 205-291 2-83 (225)
374 cd00757 ThiF_MoeB_HesA_family 95.2 0.23 5E-06 44.7 10.6 99 203-305 21-143 (228)
375 PRK06523 short chain dehydroge 95.2 0.075 1.6E-06 48.4 7.6 74 202-283 8-87 (260)
376 PRK12746 short chain dehydroge 95.2 0.28 6.1E-06 44.4 11.4 81 202-283 5-100 (254)
377 PRK06484 short chain dehydroge 95.1 0.085 1.8E-06 53.6 8.6 79 202-283 4-89 (520)
378 TIGR02622 CDP_4_6_dhtase CDP-g 95.1 0.09 1.9E-06 50.4 8.4 77 202-283 3-85 (349)
379 PF02737 3HCDH_N: 3-hydroxyacy 95.1 0.39 8.4E-06 41.5 11.5 38 205-243 1-38 (180)
380 PRK05690 molybdopterin biosynt 95.1 0.17 3.6E-06 46.1 9.6 35 202-236 31-65 (245)
381 PRK07791 short chain dehydroge 95.1 0.13 2.9E-06 47.8 9.2 82 201-283 4-102 (286)
382 PRK07097 gluconate 5-dehydroge 95.1 0.12 2.6E-06 47.3 8.8 81 202-283 9-97 (265)
383 PRK07819 3-hydroxybutyryl-CoA 95.1 0.58 1.3E-05 43.6 13.3 38 204-242 6-43 (286)
384 PRK07688 thiamine/molybdopteri 95.1 0.16 3.5E-06 48.5 9.7 35 202-236 23-57 (339)
385 PRK08278 short chain dehydroge 95.1 0.12 2.6E-06 47.7 8.8 79 202-283 5-100 (273)
386 PRK05562 precorrin-2 dehydroge 95.1 1 2.2E-05 40.2 14.0 93 202-307 24-118 (223)
387 PRK12743 oxidoreductase; Provi 95.1 0.13 2.7E-06 46.9 8.7 80 203-283 2-90 (256)
388 PRK08063 enoyl-(acyl carrier p 95.0 0.12 2.6E-06 46.7 8.5 81 202-283 3-92 (250)
389 PRK08328 hypothetical protein; 95.0 0.14 3.1E-06 46.1 8.6 35 202-236 26-60 (231)
390 PRK08762 molybdopterin biosynt 95.0 0.14 3.1E-06 49.7 9.3 35 202-236 134-168 (376)
391 PRK10669 putative cation:proto 95.0 0.17 3.6E-06 52.0 10.2 76 204-285 418-493 (558)
392 PRK05650 short chain dehydroge 95.0 0.12 2.6E-06 47.5 8.4 78 205-283 2-87 (270)
393 KOG1201 Hydroxysteroid 17-beta 95.0 0.082 1.8E-06 48.7 7.0 80 201-283 36-124 (300)
394 PRK08303 short chain dehydroge 95.0 0.11 2.5E-06 48.8 8.4 35 202-237 7-42 (305)
395 PF06325 PrmA: Ribosomal prote 94.9 0.18 3.9E-06 47.1 9.4 134 156-308 119-262 (295)
396 PF02670 DXP_reductoisom: 1-de 94.9 0.13 2.8E-06 41.6 7.3 96 206-304 1-119 (129)
397 KOG0725 Reductases with broad 94.9 0.075 1.6E-06 49.1 6.8 80 201-283 6-99 (270)
398 COG0334 GdhA Glutamate dehydro 94.9 0.21 4.5E-06 48.2 9.7 60 176-238 181-241 (411)
399 COG3288 PntA NAD/NADP transhyd 94.8 0.18 4E-06 46.5 8.8 131 198-330 159-308 (356)
400 PRK09135 pteridine reductase; 94.8 0.16 3.5E-06 45.7 8.7 79 202-283 5-95 (249)
401 PLN02928 oxidoreductase family 94.8 0.19 4.1E-06 48.2 9.5 95 202-305 158-262 (347)
402 PRK08644 thiamine biosynthesis 94.8 0.21 4.6E-06 44.4 9.1 35 202-236 27-61 (212)
403 PF10727 Rossmann-like: Rossma 94.8 0.14 3.1E-06 41.3 7.4 86 204-304 11-102 (127)
404 PRK06997 enoyl-(acyl carrier p 94.8 0.14 3.1E-06 46.9 8.3 81 202-283 5-94 (260)
405 PRK07066 3-hydroxybutyryl-CoA 94.7 1.3 2.8E-05 42.0 14.7 39 204-243 8-46 (321)
406 PRK04457 spermidine synthase; 94.7 0.63 1.4E-05 42.8 12.4 94 201-303 65-175 (262)
407 PLN02986 cinnamyl-alcohol dehy 94.7 0.19 4.1E-06 47.5 9.3 39 202-241 4-43 (322)
408 TIGR02354 thiF_fam2 thiamine b 94.7 0.092 2E-06 46.2 6.6 35 202-236 20-54 (200)
409 PRK05557 fabG 3-ketoacyl-(acyl 94.7 0.18 3.9E-06 45.3 8.7 79 202-283 4-93 (248)
410 PRK05565 fabG 3-ketoacyl-(acyl 94.7 0.16 3.5E-06 45.6 8.4 80 203-283 5-93 (247)
411 PRK05447 1-deoxy-D-xylulose 5- 94.7 0.35 7.5E-06 46.6 10.8 98 204-304 2-120 (385)
412 PRK07424 bifunctional sterol d 94.7 0.2 4.2E-06 49.1 9.3 76 202-283 177-255 (406)
413 COG2226 UbiE Methylase involve 94.7 0.4 8.6E-06 43.2 10.5 106 196-309 45-160 (238)
414 PLN00016 RNA-binding protein; 94.6 0.3 6.5E-06 47.4 10.6 95 203-306 52-165 (378)
415 PRK14192 bifunctional 5,10-met 94.6 0.3 6.5E-06 45.4 10.0 81 196-307 151-233 (283)
416 PRK06171 sorbitol-6-phosphate 94.6 0.096 2.1E-06 47.9 6.7 76 202-283 8-87 (266)
417 PRK08416 7-alpha-hydroxysteroi 94.6 0.21 4.5E-06 45.6 9.0 80 202-282 7-96 (260)
418 PF02558 ApbA: Ketopantoate re 94.6 0.082 1.8E-06 44.0 5.7 86 206-296 1-89 (151)
419 TIGR01505 tartro_sem_red 2-hyd 94.6 0.33 7.1E-06 45.3 10.3 70 205-288 1-70 (291)
420 PRK12938 acetyacetyl-CoA reduc 94.6 0.16 3.5E-06 45.8 8.0 79 202-283 2-91 (246)
421 PRK14618 NAD(P)H-dependent gly 94.5 0.39 8.5E-06 45.7 10.9 94 204-305 5-104 (328)
422 cd01492 Aos1_SUMO Ubiquitin ac 94.5 0.28 6.2E-06 43.0 9.1 92 202-297 20-134 (197)
423 PRK01683 trans-aconitate 2-met 94.5 0.48 1E-05 43.3 11.1 98 196-305 25-130 (258)
424 PRK10258 biotin biosynthesis p 94.5 1.3 2.8E-05 40.2 13.9 98 196-305 36-140 (251)
425 TIGR02415 23BDH acetoin reduct 94.5 0.2 4.4E-06 45.3 8.6 77 204-283 1-87 (254)
426 PRK07370 enoyl-(acyl carrier p 94.5 0.17 3.7E-06 46.2 8.1 104 202-307 5-149 (258)
427 PRK07792 fabG 3-ketoacyl-(acyl 94.5 0.24 5.2E-06 46.6 9.3 81 202-283 11-99 (306)
428 PF01210 NAD_Gly3P_dh_N: NAD-d 94.4 0.23 4.9E-06 41.8 8.1 85 205-296 1-91 (157)
429 TIGR01289 LPOR light-dependent 94.4 0.22 4.7E-06 47.1 8.9 78 203-283 3-91 (314)
430 COG1648 CysG Siroheme synthase 94.4 0.48 1E-05 41.9 10.3 95 202-308 11-106 (210)
431 PRK03562 glutathione-regulated 94.4 0.29 6.3E-06 50.9 10.4 77 203-285 400-476 (621)
432 TIGR01829 AcAcCoA_reduct aceto 94.4 0.23 5.1E-06 44.4 8.6 79 204-283 1-88 (242)
433 PRK08220 2,3-dihydroxybenzoate 94.3 0.17 3.7E-06 45.7 7.7 76 202-283 7-86 (252)
434 PRK12745 3-ketoacyl-(acyl-carr 94.3 0.22 4.7E-06 45.2 8.4 79 204-283 3-90 (256)
435 PRK05855 short chain dehydroge 94.3 0.17 3.6E-06 51.9 8.5 79 202-283 314-402 (582)
436 PLN02896 cinnamyl-alcohol dehy 94.3 0.22 4.8E-06 47.8 8.9 77 201-283 8-89 (353)
437 PRK11559 garR tartronate semia 94.3 0.46 9.9E-06 44.4 10.8 70 205-288 4-73 (296)
438 TIGR01472 gmd GDP-mannose 4,6- 94.3 0.16 3.4E-06 48.5 7.8 34 204-238 1-35 (343)
439 PLN03075 nicotianamine synthas 94.3 0.36 7.7E-06 45.0 9.7 97 202-304 123-232 (296)
440 PRK07340 ornithine cyclodeamin 94.3 0.25 5.4E-06 46.5 8.9 104 200-318 122-229 (304)
441 PLN02730 enoyl-[acyl-carrier-p 94.3 0.52 1.1E-05 44.4 10.9 37 202-240 8-47 (303)
442 PRK06141 ornithine cyclodeamin 94.3 1.1 2.3E-05 42.4 13.1 96 198-306 120-220 (314)
443 PRK09730 putative NAD(P)-bindi 94.3 0.24 5.3E-06 44.5 8.5 77 204-283 2-89 (247)
444 PF01370 Epimerase: NAD depend 94.2 0.14 3.1E-06 45.6 7.0 71 206-283 1-75 (236)
445 KOG1014 17 beta-hydroxysteroid 94.2 0.27 5.9E-06 45.5 8.6 79 201-284 47-137 (312)
446 PLN02662 cinnamyl-alcohol dehy 94.2 0.2 4.2E-06 47.3 8.1 38 202-240 3-41 (322)
447 PRK01438 murD UDP-N-acetylmura 94.2 0.26 5.7E-06 49.5 9.4 70 202-284 15-89 (480)
448 PRK03659 glutathione-regulated 94.2 0.32 6.9E-06 50.4 10.1 93 204-303 401-496 (601)
449 PRK14103 trans-aconitate 2-met 94.2 0.75 1.6E-05 42.0 11.6 97 194-304 21-125 (255)
450 PRK12825 fabG 3-ketoacyl-(acyl 94.2 0.29 6.3E-06 43.8 8.9 78 202-282 5-93 (249)
451 PRK12480 D-lactate dehydrogena 94.1 0.5 1.1E-05 45.0 10.7 85 202-305 145-234 (330)
452 PRK05597 molybdopterin biosynt 94.1 0.31 6.8E-06 46.9 9.3 36 202-237 27-62 (355)
453 PRK05599 hypothetical protein; 94.1 0.25 5.5E-06 44.7 8.4 77 205-283 2-87 (246)
454 KOG1252 Cystathionine beta-syn 94.1 1.1 2.4E-05 42.0 12.3 57 196-253 96-156 (362)
455 PLN02989 cinnamyl-alcohol dehy 94.1 0.26 5.7E-06 46.6 8.7 38 202-240 4-42 (325)
456 TIGR02992 ectoine_eutC ectoine 94.1 0.78 1.7E-05 43.6 11.9 95 200-307 126-226 (326)
457 cd01487 E1_ThiF_like E1_ThiF_l 94.1 0.35 7.7E-06 41.5 8.7 33 205-237 1-33 (174)
458 PRK12935 acetoacetyl-CoA reduc 94.1 0.31 6.8E-06 43.9 8.9 81 202-283 5-94 (247)
459 PRK08936 glucose-1-dehydrogena 94.1 0.28 6.2E-06 44.7 8.6 79 202-283 6-95 (261)
460 PRK07417 arogenate dehydrogena 94.1 0.39 8.4E-06 44.6 9.5 68 205-285 2-69 (279)
461 PRK14194 bifunctional 5,10-met 94.0 0.56 1.2E-05 43.8 10.3 95 181-307 137-233 (301)
462 PLN02520 bifunctional 3-dehydr 94.0 0.2 4.3E-06 51.0 8.0 72 202-284 378-450 (529)
463 KOG4022 Dihydropteridine reduc 94.0 0.52 1.1E-05 39.4 8.9 96 204-306 4-130 (236)
464 PRK13656 trans-2-enoyl-CoA red 94.0 0.28 6.1E-06 47.3 8.5 82 201-284 39-142 (398)
465 PRK09496 trkA potassium transp 94.0 0.44 9.5E-06 47.4 10.5 80 201-285 229-309 (453)
466 cd05313 NAD_bind_2_Glu_DH NAD( 94.0 0.65 1.4E-05 42.3 10.5 34 201-235 36-69 (254)
467 COG2519 GCD14 tRNA(1-methylade 93.9 0.51 1.1E-05 42.5 9.5 103 195-305 87-195 (256)
468 PLN02653 GDP-mannose 4,6-dehyd 93.9 0.17 3.6E-06 48.3 7.0 36 202-238 5-41 (340)
469 PLN02427 UDP-apiose/xylose syn 93.9 0.24 5.3E-06 48.2 8.3 75 202-282 13-95 (386)
470 TIGR03649 ergot_EASG ergot alk 93.9 0.33 7E-06 45.0 8.8 96 205-306 1-105 (285)
471 PRK05600 thiamine biosynthesis 93.9 0.42 9E-06 46.3 9.7 35 202-236 40-74 (370)
472 PLN02214 cinnamoyl-CoA reducta 93.9 0.39 8.5E-06 45.9 9.5 38 201-239 8-46 (342)
473 PRK14982 acyl-ACP reductase; P 93.9 0.25 5.4E-06 47.0 8.0 94 201-308 153-249 (340)
474 PRK07069 short chain dehydroge 93.9 0.21 4.5E-06 45.1 7.3 75 206-283 2-89 (251)
475 PRK06522 2-dehydropantoate 2-r 93.9 0.25 5.4E-06 46.3 8.0 86 205-296 2-88 (304)
476 PRK07201 short chain dehydroge 93.8 0.22 4.8E-06 52.1 8.4 78 203-283 371-458 (657)
477 PF08659 KR: KR domain; Inter 93.8 0.27 5.8E-06 42.4 7.5 32 205-236 2-34 (181)
478 PLN02256 arogenate dehydrogena 93.8 0.96 2.1E-05 42.5 11.8 96 195-306 28-128 (304)
479 PLN03013 cysteine synthase 93.8 1.1 2.4E-05 44.0 12.5 56 196-252 167-226 (429)
480 PRK14188 bifunctional 5,10-met 93.8 0.61 1.3E-05 43.5 10.2 94 181-307 136-232 (296)
481 PLN02686 cinnamoyl-CoA reducta 93.8 0.32 7E-06 47.0 8.8 45 200-245 50-95 (367)
482 PRK14191 bifunctional 5,10-met 93.8 0.6 1.3E-05 43.2 10.0 95 181-307 135-231 (285)
483 PRK08287 cobalt-precorrin-6Y C 93.8 1.2 2.6E-05 38.5 11.6 97 196-304 25-130 (187)
484 PRK09496 trkA potassium transp 93.7 0.46 1E-05 47.3 10.1 75 205-285 2-77 (453)
485 PRK15181 Vi polysaccharide bio 93.7 0.31 6.6E-06 46.8 8.5 48 189-238 2-50 (348)
486 PRK06436 glycerate dehydrogena 93.7 0.43 9.4E-06 44.8 9.2 35 202-237 121-155 (303)
487 PLN02735 carbamoyl-phosphate s 93.7 0.53 1.2E-05 52.1 11.2 98 185-290 5-115 (1102)
488 PRK13403 ketol-acid reductoiso 93.7 0.84 1.8E-05 43.0 10.8 89 200-305 13-105 (335)
489 PF08704 GCD14: tRNA methyltra 93.7 0.21 4.6E-06 45.3 6.8 105 194-305 32-146 (247)
490 PRK08125 bifunctional UDP-gluc 93.6 0.3 6.5E-06 51.2 8.7 78 200-282 312-391 (660)
491 PRK14189 bifunctional 5,10-met 93.5 0.7 1.5E-05 42.8 10.0 94 182-307 137-232 (285)
492 PRK11908 NAD-dependent epimera 93.5 0.38 8.3E-06 46.0 8.8 73 205-282 3-77 (347)
493 PRK12744 short chain dehydroge 93.5 0.38 8.3E-06 43.7 8.5 79 202-283 7-99 (257)
494 PRK01581 speE spermidine synth 93.5 1.3 2.8E-05 42.5 12.0 97 200-305 148-268 (374)
495 PRK00312 pcm protein-L-isoaspa 93.5 0.33 7.1E-06 43.0 7.7 98 195-305 71-175 (212)
496 PTZ00079 NADP-specific glutama 93.5 2.8 6.1E-05 41.4 14.6 35 201-236 235-269 (454)
497 PRK06932 glycerate dehydrogena 93.5 0.45 9.7E-06 45.0 8.9 34 202-236 146-179 (314)
498 PRK09134 short chain dehydroge 93.4 0.45 9.8E-06 43.2 8.8 81 202-283 8-97 (258)
499 PLN02244 tocopherol O-methyltr 93.4 0.52 1.1E-05 45.1 9.5 94 201-305 117-223 (340)
500 PRK07578 short chain dehydroge 93.4 1.2 2.5E-05 38.8 11.0 63 205-283 2-65 (199)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.7e-65 Score=462.40 Aligned_cols=365 Identities=45% Similarity=0.802 Sum_probs=349.6
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|.+||+++.++++||+++++.+++|++|||+||+.++|+|++|...+.|..+.. +|.++|||++|+|++||++|+++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~---~P~vLGHEgAGiVe~VG~gVt~v 77 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG---FPAVLGHEGAGIVEAVGEGVTSV 77 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC---CceecccccccEEEEecCCcccc
Confidence 568999999999999999999999999999999999999999999999987755 99999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|+..+..+||.|.+|.+++.|+|.....+.+-|..++|..++. ..|..++|+.+-++|++|.++++..++++++
T Consensus 78 kpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~ 156 (366)
T COG1062 78 KPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDP 156 (366)
T ss_pred CCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCC
Confidence 999999999999999999999999999999998888999999987776 7888999999999999999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+.+++.++.+.|...|.+.+..+.+++++|++|.|.|.|++|++++|-|+..|+.+||+++.+++|++++++||+++++|
T Consensus 157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn 236 (366)
T COG1062 157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVN 236 (366)
T ss_pred CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCc-CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecC
Q 016363 254 PATCGDK-TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (390)
..+ . ++.+.+.+++++|+|++|||+|+...+++++.+..++ |+.+.+|.......+++++..+..+.+++|+.++
T Consensus 237 ~~~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G 312 (366)
T COG1062 237 PKE---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG 312 (366)
T ss_pred chh---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence 987 4 6999999999999999999999999999999999997 9999999988888888999988889999999999
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
....+.+++++++++.+|++++.+++++.++|||++|||+.+.+++.+|-|+.+
T Consensus 313 ~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 313 GARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred CCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 999899999999999999999999999999999999999999999999888764
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=9.7e-65 Score=467.81 Aligned_cols=335 Identities=32% Similarity=0.493 Sum_probs=305.1
Q ss_pred cceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 13 ~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
+++|||++++++++|+++.+++.|+|+++||+|+|+|||+|++|++.++|.++.. .+|.++|||++|+|+++|++|++
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~--~~P~ipGHEivG~V~~vG~~V~~ 78 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP--KLPLIPGHEIVGTVVEVGEGVTG 78 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC--CCCccCCcceEEEEEEecCCCcc
Confidence 5799999999999999999999999999999999999999999999999999988 79999999999999999999999
Q ss_pred CCCCCEEee-ecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 93 VKERDLVLP-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 93 ~~vGd~V~~-~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
|++||||.+ ....+|+.|+||.+|++++|++... .|++.+| +|+||+++++++++++
T Consensus 79 ~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~i 136 (339)
T COG1064 79 LKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKI 136 (339)
T ss_pred CCCCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEEC
Confidence 999999988 8999999999999999999998444 5666665 8999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
|+++++++||.+.|+..|.|++| +.++++||++|+|+|+|++|++++|+|+++|+ +|++++++++|++.++++|++++
T Consensus 137 P~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~ 214 (339)
T COG1064 137 PEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHV 214 (339)
T ss_pred CCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEE
Confidence 99999999999999999999998 66999999999999999999999999999998 99999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 330 (390)
++..+ ++..+.+++. +|++||+++ +.+++.+++.|+++ |+++.+|........+++.+. +++++++.|+.
T Consensus 215 i~~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~ 285 (339)
T COG1064 215 INSSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSL 285 (339)
T ss_pred EEcCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEe
Confidence 99765 6777777653 999999999 78899999999999 999999977523334455554 44599999998
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
.++ +.++++++++..++++.+. +.+.++++++++||+.|.+++.. |+||.+.
T Consensus 286 ~g~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 286 VGT---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred cCC---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 887 6899999999999987765 54699999999999999998875 9999875
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-64 Score=446.98 Aligned_cols=373 Identities=58% Similarity=0.989 Sum_probs=354.2
Q ss_pred CCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCC
Q 016363 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
+..+.+|||++.+++++||.++++++++|+.+||+||++++++|++|...+.|..+.. .+|.++|||++|+|+.+|++
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~--~fP~IlGHEaaGIVESvGeg 79 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEG--LFPVILGHEAAGIVESVGEG 79 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccc--cCceEecccceeEEEEecCC
Confidence 4678999999999999999999999999999999999999999999999999987666 79999999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCC-CCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g-~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
|+++++||+|+.++...|++|.+|++++.|.|.+.....+.+ +..+|..++- .+|..+||+.+-.+|+||-+++...+
T Consensus 80 V~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v 158 (375)
T KOG0022|consen 80 VTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISV 158 (375)
T ss_pred ccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeeccee
Confidence 999999999999999999999999999999999988776544 4458888887 88999999999899999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~ 248 (390)
++++++.+++.++.+.|.+.|+|.+.++.+++++|+++.|.|.|++|+++++-|++.|+.++|+++-+++|.+.+++||+
T Consensus 159 ~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGa 238 (375)
T KOG0022|consen 159 AKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGA 238 (375)
T ss_pred EecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEe
Q 016363 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG 328 (390)
Q Consensus 249 ~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 328 (390)
.+++|+.+.. ..+.+.+.++|++|+|+-|||+|+...+.+++.+...++|+-+.+|.....+.+++.++.++.++.+.|
T Consensus 239 Te~iNp~d~~-~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~G 317 (375)
T KOG0022|consen 239 TEFINPKDLK-KPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKG 317 (375)
T ss_pred ceecChhhcc-ccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEE
Confidence 9999998532 368999999999999999999999999999999999999999999999888899999999999999999
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
+.++.++.+++++.+++.+.++++.+..+|++++||+++++||+.|.+++.+|.|+.+
T Consensus 318 s~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 318 SAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred EecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999888864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-59 Score=418.74 Aligned_cols=346 Identities=25% Similarity=0.409 Sum_probs=302.5
Q ss_pred cceeeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCC
Q 016363 13 VIRCKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 13 ~~t~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
..+|+|+++.++++ ++++++|+|++ .|+||+|++.++|||++|+|.+....... ..+.|+++|||.+|+|+++|+.|
T Consensus 2 ~~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V 80 (354)
T KOG0024|consen 2 AADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV 80 (354)
T ss_pred CcccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence 45799999999998 99999999986 99999999999999999999998765444 13589999999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+++++||||+..+..+|+.|++|++|+||.|+.+.+. +.++.. |++++|++.+++++++
T Consensus 81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~------------------G~la~y~~~~~dfc~K 139 (354)
T KOG0024|consen 81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVD------------------GTLAEYYVHPADFCYK 139 (354)
T ss_pred cccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcC------------------CceEEEEEechHheee
Confidence 9999999999999999999999999999999998873 333322 5899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++|++++|.+. ++++++|+. +++++++|++|||+|||++|+++...|+.+|+.+|++++-.+.|++.+++||++.
T Consensus 140 LPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~ 217 (354)
T KOG0024|consen 140 LPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATV 217 (354)
T ss_pred CCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeE
Confidence 99999999999987 799999987 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCC-CcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEE
Q 016363 251 FINPATCG-DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC 327 (390)
Q Consensus 251 v~~~~~~~-~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~ 327 (390)
+.+..... ...+.+.+....++ .+|++|||+|....++.++..++.+ |.+++.|+. ....+|+..+... ++++.
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~ 294 (354)
T KOG0024|consen 218 TDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLR 294 (354)
T ss_pred EeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeee
Confidence 88765511 12344445444454 6999999999999999999999999 999998865 3456666666555 99999
Q ss_pred eeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEEecCC
Q 016363 328 GTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWMDK 388 (390)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~~~ 388 (390)
|++-+. +.+++.+++++++|+++++++|++.|+++++.+||+.+..++. +|+++..++
T Consensus 295 g~fry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 295 GSFRYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeeec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 996443 4589999999999999999999999999999999999988774 499998764
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-57 Score=403.73 Aligned_cols=349 Identities=26% Similarity=0.408 Sum_probs=306.7
Q ss_pred CCCCccceeeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 8 PKAGKVIRCKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 8 ~~~~~~~t~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
+++..|.+++++.++.+++ ++++.+++.|+|+++||+|+|++||||++|++++.|.+... .+|.++|||++|+|++
T Consensus 2 ~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s--~~PlV~GHEiaG~Vvk 79 (360)
T KOG0023|consen 2 SSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLS--KYPLVPGHEIAGVVVK 79 (360)
T ss_pred CcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcc--cCCccCCceeeEEEEE
Confidence 3456899999999999998 46668999999999999999999999999999999999986 8999999999999999
Q ss_pred eCCCCCcCCCCCEEe-eecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEee
Q 016363 86 VGEYVEEVKERDLVL-PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (390)
Q Consensus 86 vG~~v~~~~vGd~V~-~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (390)
+|++|++|++||||- .....+|++|+||..+.+++|+++..++ .|...+|. -..|+|++|++++
T Consensus 80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~-~g~~~DGt--------------~~~ggf~~~~~v~ 144 (360)
T KOG0023|consen 80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTY-NGVYHDGT--------------ITQGGFQEYAVVD 144 (360)
T ss_pred ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEec-cccccCCC--------------CccCccceeEEEe
Confidence 999999999999994 5778899999999999999999766554 46666664 2337899999999
Q ss_pred CCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHH
Q 016363 165 ITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIG 243 (390)
Q Consensus 165 ~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~ 243 (390)
+.++++||++++++.||.+.|+..|.|..| ...++.||++|.|.|+|++|++++|+|+++|. +|++++++. +|.+.+
T Consensus 145 ~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~ 222 (360)
T KOG0023|consen 145 EVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAI 222 (360)
T ss_pred eeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHH
Confidence 999999999999999999999999999987 88999999999999997799999999999999 999999988 566677
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhc
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILK 322 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~ 322 (390)
+.||++..++..+ ++++.+.+.+.+++++|.|.+. ..++++.++..++.+ |++|++|.+.. .+.++.+. ++.
T Consensus 223 ~~LGAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~ 295 (360)
T KOG0023|consen 223 KSLGADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILG 295 (360)
T ss_pred HhcCcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcc
Confidence 7899999998763 3899999999888888888766 455689999999999 99999998765 44444444 444
Q ss_pred ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 323 GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
.++|.|+..++ +.+.++++++..++.+.+. + +..+++++++||++|++++.. |.|+++..
T Consensus 296 ~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 296 RKSIKGSIVGS---RKETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred cEEEEeecccc---HHHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 88999999888 6789999999999977665 6 889999999999999999875 99998754
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.3e-54 Score=421.72 Aligned_cols=377 Identities=55% Similarity=0.948 Sum_probs=310.5
Q ss_pred CCCCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEe
Q 016363 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v 86 (390)
+.+...|++|||++++++++++++.+++.|+|+++||+|||+++|||++|++.+.|..... ..+|.++|||++|+|+++
T Consensus 2 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~-~~~p~i~GhE~~G~V~~v 80 (381)
T PLN02740 2 SETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQ-RAYPRILGHEAAGIVESV 80 (381)
T ss_pred ccccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCccc-CCCCccccccceEEEEEe
Confidence 3455678999999999998779999999999999999999999999999999998875322 257899999999999999
Q ss_pred CCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCC-CCCCCCCCcccccccC--ceeeccccccccceeEEe
Q 016363 87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKG--DVIHHFLNISSFTEYSVV 163 (390)
Q Consensus 87 G~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~-~g~~~~g~~~~~~~~~--~~~~~~~~~g~~a~~~~v 163 (390)
|++++.|++||+|++.+..+|+.|.+|..++++.|.+...... ......|..++ ...| ....+....|+|+||+++
T Consensus 81 G~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~G~~aey~~v 159 (381)
T PLN02740 81 GEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRF-STKGDGQPIYHFLNTSTFTEYTVL 159 (381)
T ss_pred CCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCccc-ccccCCCcccccccCccceeEEEE
Confidence 9999999999999999999999999999999999988543210 00000000000 0000 000111224799999999
Q ss_pred eCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 164 DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 164 ~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
+.+.++++|+++++++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.+
T Consensus 160 ~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a 239 (381)
T PLN02740 160 DSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG 239 (381)
T ss_pred ehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence 99999999999999999999999999999887889999999999999999999999999999986799999999999999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcc
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG 323 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 323 (390)
+++|+++++++.+ .+.++.+.+++++++++|+|||++|+...+..+++++++++|+++.+|.......+++.+..+.++
T Consensus 240 ~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~ 318 (381)
T PLN02740 240 KEMGITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDG 318 (381)
T ss_pred HHcCCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcC
Confidence 9999999998765 112477888888766899999999987778999999987339999999764333345555545568
Q ss_pred eeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 324 RSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 324 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
+++.|+..+.+....++.++++++.++++++.++++++|+|+|+++|++.+.++...|++|++
T Consensus 319 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 319 RSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred CeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 899998776655556789999999999999888899999999999999999888778999874
No 7
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.7e-53 Score=411.87 Aligned_cols=367 Identities=45% Similarity=0.822 Sum_probs=302.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++..++++++++++|.|+|+++||+|||.++++|++|++.+.|..+.. .+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~ 79 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEG--VFPVILGHEGAGIVEAVGEGVTSVKV 79 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCC--CCCeeeccccEEEEEEECCCCccCCC
Confidence 7899999988779999999999999999999999999999999998876544 67999999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+..+|+.|.+|..++.+.|.+.......|+..+|..++. ..|...++....|+|+||+.+|.+.++++|+++
T Consensus 80 GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 80 GDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcccccccCccceeeEEechhheEECCCCC
Confidence 9999999889999999999999999987543222233222211100 001111122224699999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++|+++++++.
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~ 238 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN 238 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence 99999999999999999987888999999999999999999999999999987799999999999999999999999865
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (390)
+ .+.++.+.+++++++++|++|||+|+...+..+++++++++|+++.+|.......+++.+..+..+..+.|+..+...
T Consensus 239 ~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 317 (368)
T TIGR02818 239 D-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVK 317 (368)
T ss_pred c-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCC
Confidence 3 123567778887777999999999987778999999987339999999754333344445545455567777655443
Q ss_pred chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 336 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.+.++.+++++++++++++.++++++|+|+++++|++.+.++...|+++.+
T Consensus 318 ~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 318 GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 456789999999999999888899999999999999999887767999875
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2e-53 Score=412.09 Aligned_cols=360 Identities=37% Similarity=0.672 Sum_probs=301.5
Q ss_pred eeEEEeecCCC--------CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 16 CKAAICRIPGK--------PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 16 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
|||+++.++|. .+++.++|.|+|+++||+|||.+++||++|++.+.|..+ . .+|.++|||++|+|+++|
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~--~~p~i~GhE~~G~V~~vG 77 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-R--PLPMALGHEAAGVVVEVG 77 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-C--CCCccCCccceeEEEEeC
Confidence 78999998763 389999999999999999999999999999999988653 2 478999999999999999
Q ss_pred CCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCc
Q 016363 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (390)
+++++|++||+|++.+..+|+.|.+|+.++++.|.+.......|...+|...+.. .|.-..+..+.|+|+||+.++++.
T Consensus 78 ~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~-~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 78 EGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRL-RGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccc-cCcccccccCcccceeeEEecccc
Confidence 9999999999999988889999999999999999875432222222221100000 000001112236899999999999
Q ss_pred eEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 168 v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
++++|+++++++|+.++++++|||+++.+.+++++|++|||.|+|++|++++|+|+.+|+++|++++++++|++.++++|
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~G 236 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELG 236 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcC
Confidence 99999999999999999999999998878889999999999999999999999999999967999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeE
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV 326 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i 326 (390)
+++++++.+ .++.+.+++++++++|+||||+|....+..++++++++ |+++.+|........+++...+.. ++++
T Consensus 237 a~~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i 312 (371)
T cd08281 237 ATATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTL 312 (371)
T ss_pred CceEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEE
Confidence 999998876 67888888887778999999999877789999999999 999999975433344566555554 8999
Q ss_pred EeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 327 CGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
.|+..+.....++++++++++.+|++++.++++++|+|+++++||+.+.++... |+|
T Consensus 313 ~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 313 KGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 998776554457899999999999999888899999999999999999988877 544
No 9
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=4.7e-53 Score=409.05 Aligned_cols=368 Identities=51% Similarity=0.875 Sum_probs=305.2
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
.+|||+++..+++++++.+.|.|+|+++||+|||+++++|++|++.+.|..+.. .+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~ 78 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG--LFPVILGHEGAGIVESVGEGVTSV 78 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC--CCCceeccceeEEEEEeCCCCccC
Confidence 368999999888789999999999999999999999999999999998876544 689999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+..+|+.|.+|..++.+.|.+.....+.|...+|..++. -.|...++....|+|+||+.++++.++++|+
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 157 (368)
T cd08300 79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINP 157 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCcccccccccccceeEEEEchhceEeCCC
Confidence 999999999899999999999999999987543212233222210000 0111112222346899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.+.++++|++++++
T Consensus 158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~ 237 (368)
T cd08300 158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVN 237 (368)
T ss_pred CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEc
Confidence 99999999999999999998878889999999999999999999999999999967999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
+.+ .+.++.+.+.+++++++|+|||++|+...+..+++++++++|+++.+|........++.+..+..+..+.++..+.
T Consensus 238 ~~~-~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (368)
T cd08300 238 PKD-HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGG 316 (368)
T ss_pred ccc-cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecc
Confidence 765 1124778888887779999999999876689999999774499999996532223444454455566777776666
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
+...+++.+++++++++++++.++++++|+|+++++||+.+.++...|++++
T Consensus 317 ~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 317 WKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred cCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 5556789999999999999988889999999999999999988877799875
No 10
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=5.5e-53 Score=408.88 Aligned_cols=368 Identities=56% Similarity=0.963 Sum_probs=306.9
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
++|||+++.+++++++++++++|+|+++||+|||.+++||++|++.++|..+.. .+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~ 78 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTP--LFPRILGHEAAGIVESVGEGVTDL 78 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCC--CCCcccccccceEEEEeCCCCCcc
Confidence 489999999988889999999999999999999999999999999998876544 689999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+..+|+.|.+|..+.++.|.+.......|...++....-...|...+++...|+|+||+.++.+.++++|+
T Consensus 79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 99999999999999999999999999998754321111111000000000011112222347899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.+++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~ 238 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN 238 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999999999999999998878899999999999999999999999999999867999999999999999999999987
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
+.+ .+..+.+.+++++++++|++||++|....+..+++++++++|+++.+|.......+++++..+++++++.|+..+.
T Consensus 239 ~~~-~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 317 (369)
T cd08301 239 PKD-HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGG 317 (369)
T ss_pred ccc-cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCC
Confidence 754 1134677788777669999999999887788999999983289999997654334556655556789999987776
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEE
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 384 (390)
+..+.+++++++++.++++++.++++++|+|+++++||+.+.+++..|+++
T Consensus 318 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 318 YKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred CChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 655668899999999999988888899999999999999999988889887
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=5.4e-53 Score=407.25 Aligned_cols=354 Identities=32% Similarity=0.590 Sum_probs=300.6
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||||+++.+++++++++++|.|+|+++||+|||.++++|++|++.+.|..+ . .+|.++|||++|+|+++|+++++|+
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-D--EFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-c--cCCcccccceEEEEEEeCCCCcccC
Confidence 799999999998899999999999999999999999999999999988643 2 4789999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCC-CCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY-RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||+|++.+..+|+.|.+|..++.+.|....... ..++. +| .........|+|+||+.++++.++++|+
T Consensus 78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~-~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~ 147 (358)
T TIGR03451 78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLT-DG---------TELSPALGIGAFAEKTLVHAGQCTKVDP 147 (358)
T ss_pred CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccc-cC---------cccccccccccccceEEEehhheEECCC
Confidence 9999999999999999999999999997522100 00000 00 0000001236899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++|+.+++.+.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++++++
T Consensus 148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~ 227 (358)
T TIGR03451 148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN 227 (358)
T ss_pred CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999999999999999988877889999999999999999999999999999966999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~ 331 (390)
+.+ .++.+.+.+++++ ++|+||||+|+...+..++++++++ |+++.+|........++++..++ ++.++.+++.
T Consensus 228 ~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~ 303 (358)
T TIGR03451 228 SSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY 303 (358)
T ss_pred CCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence 876 6788889888887 8999999999877789999999999 99999997543323455554444 4888888865
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
+.....++++++++++++|++++.++++++|+++++++||+.+.+++..|+++.
T Consensus 304 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 304 GDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred CCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 543346779999999999999988889999999999999999988877788875
No 12
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.7e-52 Score=400.97 Aligned_cols=373 Identities=52% Similarity=0.900 Sum_probs=302.2
Q ss_pred CCCCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEe
Q 016363 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v 86 (390)
+.+.+....|||+++.++++.+++.++|+|+|+++||+|||.++|||++|++.+.+.. .+|.++|||++|+|+++
T Consensus 4 ~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~v 78 (378)
T PLN02827 4 SISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESI 78 (378)
T ss_pred cccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEc
Confidence 3445566789999999987679999999999999999999999999999999887642 36789999999999999
Q ss_pred CCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCC-CCCcccccccCceeeccccccccceeEEeeC
Q 016363 87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 87 G~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
|+++++|++||+|++.+..+|+.|.+|..++++.|.+..... .|... +....+ ...|....++...|+|+||+.+++
T Consensus 79 G~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~G~~aeyv~v~~ 156 (378)
T PLN02827 79 GEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLER-KGVMHSDQKTRF-SIKGKPVYHYCAVSSFSEYTVVHS 156 (378)
T ss_pred CCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccc-cccccCCCcccc-cccCcccccccccccceeeEEech
Confidence 999999999999999988999999999999999998743210 11100 000000 000000000012369999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+.++++|+++++++++.+++++.++|+++++..++++|++|||+|+|++|++++|+|+.+|++.|++++++++|.+++++
T Consensus 157 ~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~ 236 (378)
T PLN02827 157 GCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKT 236 (378)
T ss_pred hheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 99999999999999999998889999887777889999999999999999999999999998668899989999999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhccee
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 325 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 325 (390)
+|+++++++.+ .+.++.+.+++++++++|+|||++|....+..+++.+++++|+++.+|.......+......+.++++
T Consensus 237 lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 315 (378)
T PLN02827 237 FGVTDFINPND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRT 315 (378)
T ss_pred cCCcEEEcccc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCce
Confidence 99999998754 11357777888776689999999998766899999998854899999975432222222223556999
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecC
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
+.|+..+.+....++.+++++++++++++.++++++|+|+++.+|++.+.+++..|+||.+.
T Consensus 316 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 316 LKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred EEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 99987765544567899999999999998888999999999999999999888789999875
No 13
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.1e-51 Score=395.31 Aligned_cols=338 Identities=28% Similarity=0.450 Sum_probs=292.0
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++. +++.+++.|+|+++||+|||.++++|++|++.+.+..... ...|.++|||++|+|+++|+++++|++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAP-AYQGVIPGHEPAGVVVAVGPGVTHFRV 78 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCcc-CCCCceeccCceEEEEEECCCCccCCC
Confidence 78999998866 9999999999999999999999999999999987764322 146889999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|+..+..+|++|.+|+.++++.|.+... .+|...+ |+|+||+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~-------------------G~~ae~~~v~~~~~~~~P~~~ 137 (339)
T cd08239 79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRD-------------------GGHAEYMLVPEKTLIPLPDDL 137 (339)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCC-------------------CcceeEEEechHHeEECCCCC
Confidence 9999999999999999999999999986543 1233333 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++|+.++++++|||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.+++++
T Consensus 138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~ 216 (339)
T cd08239 138 SFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG 216 (339)
T ss_pred CHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999987 668899999999999999999999999999994499999999999999999999999887
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (390)
+ .+ .+.+.+++++ ++|+||||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.|+....
T Consensus 217 ~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~- 289 (339)
T cd08239 217 Q---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS- 289 (339)
T ss_pred c---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC-
Confidence 6 45 6777777777 9999999999988678899999999 99999996542 22222222344588999986544
Q ss_pred CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 335 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.++++++++++.++++++.++++++|+++++++||+.+.++..+|+++++
T Consensus 290 --~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 --VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred --HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 46799999999999999888899999999999999999887666999874
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.7e-50 Score=390.70 Aligned_cols=365 Identities=52% Similarity=0.923 Sum_probs=302.6
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
+-|||+++.+.+++++++++|.|.++++||+|||+++++|++|++.+.|..+ . .+|.++|||++|+|+++|++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-T--LFPVILGHEGAGIVESVGEGVTNL 77 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-C--CCCeecccceeEEEEeeCCCCccC
Confidence 3588999998887799999999999999999999999999999999988654 3 578999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+..+|+.|.+|..++++.|.+..+. ..|...++.-++ ...|...+++...|+|+||+.++.+.++++|+
T Consensus 78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~ 155 (365)
T cd08277 78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRF-TCKGKKIYHFLGTSTFSQYTVVDENYVAKIDP 155 (365)
T ss_pred CCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccc-ccCCcccccccccccceeeEEEchhheEECCC
Confidence 9999999998999999999999999999885432 112222110000 00011111222347899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.++++++|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++++++
T Consensus 156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~ 235 (365)
T cd08277 156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFIN 235 (365)
T ss_pred CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEec
Confidence 99999999999999999998878889999999999999999999999999999867999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
..+ .+.++.+.+++++++++|+||||+|....+..+++++++++|+++.+|.... ...++++..+..++++.|+..+.
T Consensus 236 ~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~ 313 (365)
T cd08277 236 PKD-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGG 313 (365)
T ss_pred ccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCC
Confidence 754 1124567777777678999999999877688999999873399999996542 23345555555588899988776
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
+....+++++++++.++++++.++++++|+|+++++||+.+.+++..|+++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred CChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 6555678999999999999988889999999999999999988876798873
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-50 Score=385.82 Aligned_cols=338 Identities=19% Similarity=0.326 Sum_probs=277.7
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccc-cCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
.-+|++++++++. +++++++.| ++++||||||.++|||++|+++++ |........+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 3478999999988 999999987 689999999999999999999876 3322211257999999999999999 6789
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||+|+..+..+|+.|++|..++++.|.+... .|... ++....|+|+||++++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~--------------~~~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAM--------------YFPHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccc--------------ccCCCCCceeeeEEechHHeEECC
Confidence 9999999999999999999999999999987543 12100 000012589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++++ +..++++||+++ +.....+|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|+++++
T Consensus 142 ~~l~~~~aa-~~~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMA-FAEPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHH-hhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 999987665 445788999987 556667899999999999999999999999997799999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
++.+ .++.+.. +. .+++|+||||+|.+..+..++++++++ |+++.+|.... ..+++...+ .+++++.|+..
T Consensus 220 ~~~~---~~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~ 291 (343)
T PRK09880 220 NPQN---DDLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFR 291 (343)
T ss_pred cCCc---ccHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEee
Confidence 8766 4443322 21 236999999999877689999999999 99999996533 234444444 44889998853
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEec
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM 386 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~~ 386 (390)
. .+++++++++++++++++.++++++|+|+++++|++.+.++.. +|+++.+
T Consensus 292 ~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 292 F----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred c----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 3 3578999999999999988889999999999999999988765 4999864
No 16
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.6e-49 Score=375.17 Aligned_cols=316 Identities=25% Similarity=0.329 Sum_probs=268.5
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++.+.+++ +++.++|.|.|++|||||||+++|+|+.|...++|..+.. .++|.++|.|++|+|+++|++|+.|
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~-~~~P~i~G~d~aG~V~avG~~V~~~ 79 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPV-RPLPFIPGSEAAGVVVAVGSGVTGF 79 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCC-CCCCCcccceeEEEEEEeCCCCCCc
Confidence 789999998876 8899999999999999999999999999999999972222 2699999999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||||+... .. + ..|+|+||+.+|++.++++|+
T Consensus 80 ~~GdrV~~~~-~~------------------------~---------------------~~G~~AEy~~v~a~~~~~~P~ 113 (326)
T COG0604 80 KVGDRVAALG-GV------------------------G---------------------RDGGYAEYVVVPADWLVPLPD 113 (326)
T ss_pred CCCCEEEEcc-CC------------------------C---------------------CCCcceeEEEecHHHceeCCC
Confidence 9999998753 00 0 125999999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++|+++||+++++++|||+++....++++|++|||+|+ |++|++++|+|+.+|+ ++++++.++++.++++++|+++++
T Consensus 114 ~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi 192 (326)
T COG0604 114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVI 192 (326)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEE
Confidence 99999999999999999999989899999999999987 9999999999999998 788888888888899999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (390)
++.+ .+|.+.+++++++ ++|+|||++|+.. +..++++|+++ |+++.+|...+....+++...+.. ++.+.|..
T Consensus 193 ~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~ 267 (326)
T COG0604 193 NYRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVT 267 (326)
T ss_pred cCCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEec
Confidence 9887 7799999999999 9999999999988 88899999999 999999976632233444444443 77777776
Q ss_pred cCCC---CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcC-Cc-eEEEEec
Q 016363 331 FGGL---KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG-KS-LRCIIWM 386 (390)
Q Consensus 331 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~-~~-~kvvl~~ 386 (390)
.... ...+.+.++.+++++|++++. ++.+|||++..+|..+.... +. +|+|+++
T Consensus 268 ~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 268 LGSRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ceecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 5543 124567789999999977665 77999999966666554443 44 5999874
No 17
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.3e-49 Score=378.79 Aligned_cols=343 Identities=27% Similarity=0.397 Sum_probs=281.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCc-ccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV-IFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|++++++.++...++++.+.|.+.++||+|||.++|||++|++.+++..+.. ..|. ++|||++|+|+++| .++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~--~~~~~i~GHE~~G~V~evG-~~~~~~ 77 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV--PPGDIILGHEFVGEVVEVG-VVRGFK 77 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC--CCCCcccCccceEEEEEec-cccCCC
Confidence 6788888887645577777677899999999999999999999999987666 4555 99999999999999 778899
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE-cCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK-ITP 173 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~-~p~ 173 (390)
+||||++.+..+|+.|.+|+.++++.|.+.++ .|....+. .-.|+|+||+.+|.+++++ +|+
T Consensus 78 ~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~~--------------~~~G~~aEyv~vp~~~~~~~~pd 140 (350)
T COG1063 78 VGDRVVVEPNIPCGHCRYCRAGEYNLCENPGF---YGYAGLGG--------------GIDGGFAEYVRVPADFNLAKLPD 140 (350)
T ss_pred CCCEEEECCCcCCCCChhHhCcCcccCCCccc---cccccccC--------------CCCCceEEEEEeccccCeecCCC
Confidence 99999999999999999999999999996553 12111100 0125899999999755555 588
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~ 252 (390)
++ ..+++.+..+++++|++.......+++++|+|+|+|++|++++++++..|+.+||+++.+++|++++++ +|++.++
T Consensus 141 ~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~ 219 (350)
T COG1063 141 GI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV 219 (350)
T ss_pred CC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEee
Confidence 88 556666666899998874466666777799999999999999999999999999999999999999998 6777777
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
+... .+....+.+++.+ ++|++|||+|...++..+++.++++ |+++.+|....... .++...+ .+++++.|+.
T Consensus 220 ~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~ 294 (350)
T COG1063 220 NPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSL 294 (350)
T ss_pred cCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEecc
Confidence 6655 3677788888988 9999999999988899999999999 99999998765432 4444444 4599999984
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~ 386 (390)
.. ....+++.+++++.+|++++.+++++.++++++++||+.+.++.. .|+++++
T Consensus 295 ~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 295 RP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 21 123579999999999999999999999999999999999987553 4999864
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=3.3e-49 Score=383.83 Aligned_cols=346 Identities=25% Similarity=0.370 Sum_probs=275.7
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCC-------CCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPK-------AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
-|||+++.+++. ++++++|.|+|+ +|||||||+++|||++|++++.|..+ . .+|.++|||++|+|+++|
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~--~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-A--PTGLVLGHEITGEVIEKG 77 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-C--CCCccccceeEEEEEEEc
Confidence 489999999986 999999999874 68999999999999999999988643 2 478999999999999999
Q ss_pred CCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCC---CCCCCCCCCcccccccCceeeccccccccceeEEee
Q 016363 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY---RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~---~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (390)
++|++|++||||++.+..+|+.|.+|+.++++.|.+..... .+|+...+ ...|+|+||+.+|
T Consensus 78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~ 142 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG---------------GWVGGQSEYVMVP 142 (393)
T ss_pred CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC---------------CCCCceEEEEEec
Confidence 99999999999999999999999999999999998643110 01211000 0025899999999
Q ss_pred CC--ceEEcCCCCCc----chhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 165 IT--HVVKITPHIPL----GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 165 ~~--~v~~~p~~~~~----~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
.. .++++|++++. .+++.+.+++++||+++ ...++++|++|||.|+|++|++++|+|+.+|++.|++++++++
T Consensus 143 ~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~ 221 (393)
T TIGR02819 143 YADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPA 221 (393)
T ss_pred hhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHH
Confidence 64 79999998754 34677778899999987 5688999999999888999999999999999955676778889
Q ss_pred hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccCh--------------HHHHHHHHHhccCCceEEE
Q 016363 239 KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT--------------SVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 239 ~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~--------------~~~~~~~~~l~~~~G~~v~ 303 (390)
|+++++++|++.+....+ .++.+.+.+++++ ++|++||++|.+ .+++.+++.++++ |+++.
T Consensus 222 r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~ 297 (393)
T TIGR02819 222 RLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGI 297 (393)
T ss_pred HHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEE
Confidence 999999999975433333 4677888888877 899999999986 3689999999999 99999
Q ss_pred EcccCCCCC-----------cccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCcccee-eeeccccHHHH
Q 016363 304 LGVEMHGSP-----------ISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT-HEVSFHDINKA 370 (390)
Q Consensus 304 ~g~~~~~~~-----------~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~~~~A 370 (390)
+|....... +++....+ .+++++.|.. ....+.+.++++++++|++++.++++ ++|+|+++++|
T Consensus 298 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a 374 (393)
T TIGR02819 298 PGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEG 374 (393)
T ss_pred eeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHH
Confidence 997532111 11222222 2255666532 11123346899999999999988776 78999999999
Q ss_pred HHHHhcCCceEEEEecC
Q 016363 371 FDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 371 ~~~~~~~~~~kvvl~~~ 387 (390)
|+.+.++..+|+++.++
T Consensus 375 ~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 375 YAEFDAGAAKKFVIDPH 391 (393)
T ss_pred HHHHhhCCceEEEEeCC
Confidence 99998887779999874
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=6.9e-49 Score=378.41 Aligned_cols=345 Identities=21% Similarity=0.337 Sum_probs=285.9
Q ss_pred CCCCCCccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEE
Q 016363 6 ASPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 6 ~~~~~~~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~ 85 (390)
.+|.+..||-++++.+.+..+.+++.+++.|.|+++||+|||.++|||++|++.+.|..+.. .+|.++|||++|+|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 3 KSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFT--RYPIVPGHEIVGIVTK 80 (360)
T ss_pred CChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCC--CCCccCCcceeEEEEE
Confidence 35777899999999999887779999999999999999999999999999999998865433 5789999999999999
Q ss_pred eCCCCCcCCCCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCC----CCCCCCCCcccccccCceeecccccccccee
Q 016363 86 VGEYVEEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~ 160 (390)
+|+++++|++||+|++.+. .+|+.|.+|+.++++.|.+..+.+. .|... .|+|+||
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~-------------------~G~~aey 141 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKN-------------------YGGYSDM 141 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcC-------------------CCccceE
Confidence 9999999999999986543 5899999999999999987543210 01111 2589999
Q ss_pred EEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 161 SVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 161 ~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
++++++.++++|+++++++++.+++.+.|||+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++.
T Consensus 142 ~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~ 220 (360)
T PLN02586 142 IVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKE 220 (360)
T ss_pred EEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchh
Confidence 9999999999999999999999999999999988666678899999999999999999999999999 788887776664
Q ss_pred -HHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh
Q 016363 241 -EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 319 (390)
Q Consensus 241 -~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~ 319 (390)
+.++++|+++++++.+ . +.+++.++ ++|+|||++|...+++.++++++++ |+++.+|.... ..+++...
T Consensus 221 ~~~~~~~Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~ 290 (360)
T PLN02586 221 DEAINRLGADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFP 290 (360)
T ss_pred hhHHHhCCCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHH
Confidence 5567899999987654 2 24555443 7999999999876789999999999 99999996532 23445544
Q ss_pred hh-cceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 320 IL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 320 ~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
+. ++..+.|+..+. .++++++++++.+|++++. + ++|+|+++++||+.+.+++.. |+++++..
T Consensus 291 ~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~ 355 (360)
T PLN02586 291 LVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDVAN 355 (360)
T ss_pred HHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 44 477777776543 4679999999999988754 5 689999999999999988765 99998744
No 20
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=5.1e-48 Score=371.14 Aligned_cols=338 Identities=21% Similarity=0.332 Sum_probs=282.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++++++. +++.+.|.|+| +++||+|||.++++|++|++.+..... . .+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-H--YYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-C--CCCcccccceEEEEEEeCCCCCCCC
Confidence 68999999876 99999999987 599999999999999999975432211 1 3678999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..+.++.|.+... .|...+ |+|+||+.++++.++++|++
T Consensus 77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ 134 (347)
T PRK10309 77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRD-------------------GGNAEYIVVKRKNLFALPTD 134 (347)
T ss_pred CCCEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCC-------------------CccceeEEeehHHeEECcCC
Confidence 99999999999999999999999999976433 232223 58999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++++.+. +++++|+++ +...+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.+.++++|+++++++
T Consensus 135 ~s~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~ 212 (347)
T PRK10309 135 MPIEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNS 212 (347)
T ss_pred CCHHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecC
Confidence 9999998774 466688875 67889999999999999999999999999999558999999999999999999999987
Q ss_pred CCCCCcCHHHHHHhhcCC-Ccc-EEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCccc-ch-HhhhcceeEEeee
Q 016363 255 ATCGDKTVSQVIKEMTDG-GAD-YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NS-IEILKGRSVCGTY 330 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~-~~~~~~~~i~g~~ 330 (390)
++ .+ .+.+.+++.+ ++| ++|||+|+...+..++++++++ |+++.+|.......++. .. ..+.+++++.|+.
T Consensus 213 ~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~ 287 (347)
T PRK10309 213 RE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSW 287 (347)
T ss_pred cc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEe
Confidence 65 34 5567777766 898 9999999987789999999999 99999996543211211 11 2234588999986
Q ss_pred cCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+... ..++++++++++++|++++.++++++|+|+++++|++.+.++... |+++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 64322 246789999999999998888899999999999999999887764 999976
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.2e-47 Score=368.78 Aligned_cols=334 Identities=25% Similarity=0.402 Sum_probs=282.8
Q ss_pred EEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCCCcccccceeEEEEEeCCCCCcCCCCC
Q 016363 19 AICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERD 97 (390)
Q Consensus 19 ~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd 97 (390)
+++++++++++++++|.|+|+++||+|||.++++|++|++.+.+.. +.. .+|.++|||++|+|+++|++++.+ +||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNH--ALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccC--CCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 4677787779999999999999999999999999999999874432 222 578999999999999999999887 999
Q ss_pred EEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC----
Q 016363 98 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP---- 173 (390)
Q Consensus 98 ~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~---- 173 (390)
+|++.+..+|+.|.+|+.++.+.|..... .|...+ |+|+||+.++.+.++++|+
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~ae~~~v~~~~~~~ip~~~~~ 136 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQ-------------------GGFASHIVVPAKGLCVVDEARLA 136 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCc---cCcCCC-------------------CcccceEEechHHeEECCccccc
Confidence 99999999999999999999999976433 232222 4899999999999999999
Q ss_pred --CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 174 --HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 174 --~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
++++++++.+++++.|||+++ ....+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++
T Consensus 137 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~ 214 (349)
T TIGR03201 137 AAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLT 214 (349)
T ss_pred ccCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceE
Confidence 899999999999999999987 45889999999999999999999999999999 89999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-Ccc----EEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-cee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GAD----YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS 325 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D----~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~ 325 (390)
+++.+....++.+.+++++++ |+| +||||+|+...++.++++++++ |+++.+|..... .+++...+.. +.+
T Consensus 215 i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~ 291 (349)
T TIGR03201 215 LNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAK--TEYRLSNLMAFHAR 291 (349)
T ss_pred ecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCC--cccCHHHHhhcccE
Confidence 987651123577788888877 886 8999999988788899999999 999999976432 3444444443 778
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+.|++... .++++++++++++|++++.+++ ++|+|+++++||+.+.++... |+++++
T Consensus 292 ~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 292 ALGNWGCP---PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EEEEecCC---HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 88875432 4679999999999999887777 479999999999999888765 988853
No 22
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.9e-47 Score=369.70 Aligned_cols=334 Identities=23% Similarity=0.323 Sum_probs=273.2
Q ss_pred EEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCC
Q 016363 18 AAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERD 97 (390)
Q Consensus 18 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd 97 (390)
+++..+..++++..+++.|+|+++||+|||.++|||++|++.+.|..... .+|.++|||++|+|+++|+++++|++||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~--~~p~i~GhE~aG~Vv~vG~~v~~~~vGd 86 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFS--RYPIIPGHEIVGIATKVGKNVTKFKEGD 86 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCC--CCCcccCceeeEEEEEECCCCCccCCCC
Confidence 33444444458888999999999999999999999999999998865333 5789999999999999999999999999
Q ss_pred EEeeeccc-CCCCCccccCCCCCCCcCCCCCCC----CCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 98 LVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 98 ~V~~~~~~-~~~~c~~c~~~~~~~c~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+|++.+.. +|+.|.+|+.++++.|.+...... .|... .|+|+||+.++++.++++|
T Consensus 87 rV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~-------------------~G~~aey~~v~~~~~~~lP 147 (375)
T PLN02178 87 RVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRN-------------------QGGYSDVIVVDHRFVLSIP 147 (375)
T ss_pred EEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcC-------------------CCccccEEEEchHHeEECC
Confidence 99866554 699999999999999987543110 01111 2589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh-HHHHHhcCCcE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITD 250 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~~g~~~ 250 (390)
+++++++++.+++...|||+++..... .++|++|+|.|+|++|++++|+|+.+|+ +|+++++++++ .+.++++|+++
T Consensus 148 ~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~ 226 (375)
T PLN02178 148 DGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADS 226 (375)
T ss_pred CCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcE
Confidence 999999999999999999998744433 4689999999999999999999999999 89998877654 67888999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 329 (390)
++++.+ . +.+.+.++ ++|+||||+|...++..++++++++ |+++.+|.... ..+++...+ .+++++.|+
T Consensus 227 ~i~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~~i~g~ 296 (375)
T PLN02178 227 FLVTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK--PLDLPIFPLVLGRKMVGGS 296 (375)
T ss_pred EEcCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--CCccCHHHHHhCCeEEEEe
Confidence 988654 2 34555543 7999999999887689999999999 99999996532 234455444 448889988
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCCC
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL 389 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~~ 389 (390)
..+. .+++.++++++++|++++. + ++|||+++++||+.+.+++.. |+++++.++
T Consensus 297 ~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 351 (375)
T PLN02178 297 QIGG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDVANS 351 (375)
T ss_pred CccC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEeccc
Confidence 6544 4678999999999988754 5 679999999999999988765 999987543
No 23
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.7e-46 Score=363.52 Aligned_cols=369 Identities=48% Similarity=0.787 Sum_probs=299.2
Q ss_pred ccceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 12 ~~~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
.-.+||++++..++++++++++|.|++.++||+|||+++++|++|++.+.|... . .+|.++|||++|+|+++|++++
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~ 80 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-T--PFPVILGHEAAGIVESVGEGVT 80 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-C--CCCccccccceEEEEEeCCCCc
Confidence 345699999999887799999999999999999999999999999999988752 2 4788999999999999999999
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
.+++||+|++.+..+|+.|.+|..++.+.|++.....-.|...++.-+. -..|...+++...|+|+||++++.+.++++
T Consensus 81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~G~~~e~~~v~~~~~~~l 159 (373)
T cd08299 81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRF-TCKGKPIHHFLGTSTFSEYTVVDEIAVAKI 159 (373)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCcccc-ccCCcccccccCCCcccceEEecccceeeC
Confidence 9999999999888999999999999999998754311011111110000 001112222333479999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
|+++++++++.+++++.|||+++....++++|++|||+|+|++|++++++|+.+|+++|+++++++++++.++++|++++
T Consensus 160 P~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~ 239 (373)
T cd08299 160 DAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATEC 239 (373)
T ss_pred CCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE
Confidence 99999999999999999999988788999999999999889999999999999998679999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHh-ccCCceEEEEcccCCCCCcccchHhhhcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (390)
++..+ .+.++.+.+.+++++++|++|||+|++..+..++..+ +++ |+++.+|........++.+..+.++.++.++.
T Consensus 240 i~~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~ 317 (373)
T cd08299 240 INPQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAV 317 (373)
T ss_pred ecccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEE
Confidence 98754 1123667777776668999999999866677767765 456 99999997543334455554455688888887
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.+.+...+++.++++.+.++.+++.++++++|+++++++|++.+.+++..|+++.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 318 FGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred ecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 77665566788888888888777777788999999999999999887767888763
No 24
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=3.6e-47 Score=366.35 Aligned_cols=336 Identities=20% Similarity=0.297 Sum_probs=265.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCC-CCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++..++.++++.++|.|+|+++||||||+++|||++|++.++|..+..+ ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 68899986554499999999999999999999999999999999998753221 146899999999999999999 9999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++++.|...... ..|... ..|+|+||++++++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~------------------~~G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKG------------------LHGFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCC------------------CCccceeEEEeccccEEECCCC
Confidence 999999998889999999999999999864321 112110 1258999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHH------HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC---ChhhHHHHHh
Q 016363 175 IPLGIACLLSCGVSTGVGAAWK------VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKK 245 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~------~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~ 245 (390)
++ +++.+..++.+++.++.. ..+.++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|++++++
T Consensus 141 ~~--~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA--DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC--cceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 99 344444566665554322 2336799999999999999999999999999 8999997 6889999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccc----hHh-h
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN----SIE-I 320 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~----~~~-~ 320 (390)
+|++. +++.+ .++.+ . + ..+++|+||||+|....+..+++.++++ |+++.+|........+++ ... +
T Consensus 218 ~Ga~~-v~~~~---~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~ 289 (355)
T cd08230 218 LGATY-VNSSK---TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLV 289 (355)
T ss_pred cCCEE-ecCCc---cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHh
Confidence 99987 45544 34433 2 1 2238999999999877689999999999 999999976542333444 122 3
Q ss_pred hcceeEEeeecCCCCchhhHHHHHHHHHcCCC----CCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 321 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKEL----NLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.+++++.|+.... .++++++++++.++++ .+.++++++|+++++.+||+.+.++. .|++|++
T Consensus 290 ~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 290 LGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred hcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 4588999985443 4678899999998862 35667899999999999999886543 5999874
No 25
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2e-46 Score=361.98 Aligned_cols=348 Identities=25% Similarity=0.416 Sum_probs=291.0
Q ss_pred eEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc----
Q 016363 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE---- 92 (390)
Q Consensus 17 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---- 92 (390)
||++++++++.+++.+.+.|.|+++||+|||.++++|++|+....|..+.. .+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~~ 79 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRV--PLPIILGHEGVGRVVALGGGVTTDVAG 79 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCC--CCCcccccCCceEEEEeCCCccccccC
Confidence 789999998679999999999999999999999999999999998876433 57889999999999999999986
Q ss_pred --CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCC-CCcccccccCceeeccccccccceeEEeeCC-ce
Q 016363 93 --VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD-GTSRFRELKGDVIHHFLNISSFTEYSVVDIT-HV 168 (390)
Q Consensus 93 --~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~-g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~v 168 (390)
|++||+|++.+..+|+.|.+|+.+..+.|.+... .|...+ +. ....|+|++|+.++++ .+
T Consensus 80 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~ 143 (361)
T cd08231 80 EPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCDD-------------PHLSGGYAEHIYLPPGTAI 143 (361)
T ss_pred CccCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccccC-------------CCCCcccceEEEecCCCce
Confidence 9999999999999999999999999999987643 122111 00 0012689999999986 79
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~ 248 (390)
+++|+++++.+++.++++++|||+++.+...+++|++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|+
T Consensus 144 ~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~ 223 (361)
T cd08231 144 VRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGA 223 (361)
T ss_pred EECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence 99999999999999989999999998666667799999999889999999999999999789999999999999999999
Q ss_pred cEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeE
Q 016363 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSV 326 (390)
Q Consensus 249 ~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i 326 (390)
+.++++++....++...+.+++++ ++|++|||+|+...+..++++++++ |+++.+|........++++..+. +++++
T Consensus 224 ~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
T cd08231 224 DATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTI 302 (361)
T ss_pred CeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEE
Confidence 999887651112234578888877 9999999999876688999999999 99999996543333445544334 48888
Q ss_pred EeeecCCCCchhhHHHHHHHHHcC--CCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 327 CGTYFGGLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.++..+. .+++.++++++.++ .+++.++++++|+++++++||+.+.++..+|++|++
T Consensus 303 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 303 IGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred EEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 8886543 45788899999988 666777888999999999999999887767999864
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.3e-46 Score=358.43 Aligned_cols=320 Identities=18% Similarity=0.255 Sum_probs=269.7
Q ss_pred EEeecCCC----CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 19 AICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 19 ~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
+.+.+++. .++++++|.|.|+++||+|||.++|+|++|++.+.|..+.. ..|.++|||++|+|+++|+++++|+
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH--RPRVTPGHEVVGEVAGRGADAGGFA 79 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC--CCCccCCcceEEEEEEECCCCcccC
Confidence 45555553 38999999999999999999999999999999998875433 4578999999999999999999999
Q ss_pred CCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||+|+..+. .+|+.|.+|..++++.|.+..+ .|...+ |+|+||+.++++.++++|+
T Consensus 80 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~lP~ 137 (329)
T TIGR02822 80 VGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTD-------------------GGYAEYTTVPAAFAYRLPT 137 (329)
T ss_pred CCCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccC-------------------CcceeEEEeccccEEECCC
Confidence 9999987553 4799999999999999987543 233333 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.+++++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 138 GYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGG 215 (329)
T ss_pred CCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecc
Confidence 999999999999999999988 56899999999999999999999999999999 8999999999999999999999987
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeecC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 332 (390)
..+ .. .+++|+++++.+....+..++++++++ |+++.+|..... ..+++... +.+++++.++...
T Consensus 216 ~~~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~ 281 (329)
T TIGR02822 216 AYD---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSN 281 (329)
T ss_pred ccc---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecC
Confidence 533 11 126899999888777789999999999 999999964322 12344443 3458888887643
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
. ++++.++++++++++++ +++++|+|+++++|++.+.+++.. |+|+
T Consensus 282 ~---~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 282 T---RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred C---HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 2 56788899999999875 357999999999999999988776 9887
No 27
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=3.2e-47 Score=328.50 Aligned_cols=320 Identities=24% Similarity=0.274 Sum_probs=276.3
Q ss_pred CCccceeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC
Q 016363 10 AGKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (390)
Q Consensus 10 ~~~~~t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (390)
...|+..|-+++++.|+. ++++++|.|+|+|+|++||-.|+|+|..|....+|-+... ++|++||-|++|+|+++|
T Consensus 3 ~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~--plPytpGmEaaGvVvAvG 80 (336)
T KOG1197|consen 3 AASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPA--PLPYTPGMEAAGVVVAVG 80 (336)
T ss_pred CCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCC--CCCcCCCcccceEEEEec
Confidence 357899999999999875 8999999999999999999999999999999999988655 799999999999999999
Q ss_pred CCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCc
Q 016363 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (390)
Q Consensus 88 ~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (390)
++|+++++||||+-+.. +|.|+|++.+|...
T Consensus 81 ~gvtdrkvGDrVayl~~-------------------------------------------------~g~yaee~~vP~~k 111 (336)
T KOG1197|consen 81 EGVTDRKVGDRVAYLNP-------------------------------------------------FGAYAEEVTVPSVK 111 (336)
T ss_pred CCccccccccEEEEecc-------------------------------------------------chhhheecccccee
Confidence 99999999999986421 26899999999999
Q ss_pred eEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc
Q 016363 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246 (390)
Q Consensus 168 v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~ 246 (390)
++++|+.+++.+||++...++|||.-+++.-.+++|++|||+.| |++|+++.|+++..|+ .+|+++.+.+|++++++.
T Consensus 112 v~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~aken 190 (336)
T KOG1197|consen 112 VFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKEN 190 (336)
T ss_pred eccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhc
Confidence 99999999999999988899999998888889999999999976 9999999999999999 999999999999999999
Q ss_pred CCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ce
Q 016363 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 324 (390)
Q Consensus 247 g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~ 324 (390)
|+++.++++. +|+.+.+.+++.+ |+|+++|++|.+. +...+.+|++. |.++.+|..+... -+++...+.. .+
T Consensus 191 G~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~asgl~-~p~~l~~ls~k~l 264 (336)
T KOG1197|consen 191 GAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNASGLI-DPIPLNQLSPKAL 264 (336)
T ss_pred CCcceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEeccccCCC-CCeehhhcChhhh
Confidence 9999999988 8999999999988 9999999999988 99999999999 9999999765321 1222221111 34
Q ss_pred eEEe-eecCCCCchhh----HHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCCC
Q 016363 325 SVCG-TYFGGLKPRSD----IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL 389 (390)
Q Consensus 325 ~i~g-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~~ 389 (390)
++.. +.++....+.. ..+++.++.+|.++++ |+++|||+++.+|+..++++.+. |+++.+.+.
T Consensus 265 ~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 265 QLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred hhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCCcc
Confidence 3332 23333333333 3467888889987776 99999999999999999998876 999987653
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.9e-46 Score=358.59 Aligned_cols=337 Identities=27% Similarity=0.443 Sum_probs=287.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC---------CCCCCcccccceeEEEEEe
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP---------KLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~---------~~~~p~~~G~e~~G~V~~v 86 (390)
|||+++.+++. +++++++.|+|+++||+||+.++++|++|++.+.+..... ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 78999998876 9999999999999999999999999999998765431100 0136889999999999999
Q ss_pred CCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC
Q 016363 87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 166 (390)
Q Consensus 87 G~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 166 (390)
|++++.|++||+|++.+..+|++|.+|.++..++|.+... .|+.. ..|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGG------------------GGGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCC------------------CCCceeeEEEechH
Confidence 9999999999999999999999999999999999986543 22211 02589999999999
Q ss_pred ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc
Q 016363 167 HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246 (390)
Q Consensus 167 ~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~ 246 (390)
.++++|+++++++++.+ .++.|||+++ ...++++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998876 5788999988 888999999999999999999999999999997899999999999999999
Q ss_pred CCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ce
Q 016363 247 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 324 (390)
Q Consensus 247 g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~ 324 (390)
|++.++++.+ .++.+.+++++++ ++|++||++|....+..++++++++ |+++.+|... ...+++...+.. ++
T Consensus 217 ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~ 290 (351)
T cd08233 217 GATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEK 290 (351)
T ss_pred CCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCc
Confidence 9999998877 6788889888887 7999999999876689999999999 9999999754 234555544444 88
Q ss_pred eEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccH-HHHHHHHhcCCc--eEEEEe
Q 016363 325 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI-NKAFDLLLEGKS--LRCIIW 385 (390)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~-~~A~~~~~~~~~--~kvvl~ 385 (390)
++.|+.... .+++++++++++++++++.++++++|+++++ ++|++.+.++.. +|++|.
T Consensus 291 ~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 291 TLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 999886443 4679999999999999887888899999996 799999888774 599873
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-45 Score=356.11 Aligned_cols=341 Identities=23% Similarity=0.332 Sum_probs=279.6
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
+.++|+++.++++++++.+++.|+|+++||+|||.+++||++|++.+.|..... .+|.++|||++|+|+++|+++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~Vv~vG~~v~~~ 85 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMS--NYPMVPGHEVVGEVVEVGSDVSKF 85 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcC--CCCccCCceeeEEEEEECCCcccc
Confidence 348899999999889999999999999999999999999999999998865433 578999999999999999999999
Q ss_pred CCCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 94 KERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 94 ~vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
++||+|++.+. .+|+.|.+|..++++.|.+....+..++ ..| ....|+|+||+.++.+.++++|
T Consensus 86 ~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g--------------~~~~G~~aey~~v~~~~~~~iP 150 (357)
T PLN02514 86 TVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG--------------KPTQGGFASAMVVDQKFVVKIP 150 (357)
T ss_pred cCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC--------------ccCCCccccEEEEchHHeEECC
Confidence 99999986443 3799999999999999987532211000 001 0012589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v 251 (390)
+++++++++.+++++.|||+++......++|++|+|+|+|++|++++|+|+.+|+ +||++++++++.+.+ +++|++.+
T Consensus 151 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~ 229 (357)
T PLN02514 151 EGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDY 229 (357)
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEE
Confidence 9999999999999999999988665667899999999889999999999999999 788888888776555 56999888
Q ss_pred EcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
+++.+ . +.+.+.+. ++|++||++|....++.++++++++ |+++.+|.... ..+++...+ .++.++.|+.
T Consensus 230 i~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~ 299 (357)
T PLN02514 230 LVSSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKVITGSF 299 (357)
T ss_pred ecCCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcEEEEEe
Confidence 76544 1 23444443 7999999999876689999999999 99999997543 234444444 4488999987
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
.+. ..+++++++++++++++ +++ ++|+|+++.+||+.+.++... |+++.++.
T Consensus 300 ~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 300 IGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred cCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 654 46789999999999765 446 689999999999999988775 99998764
No 30
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=2.4e-45 Score=354.80 Aligned_cols=362 Identities=46% Similarity=0.818 Sum_probs=301.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
+||+++.+.+.++.+.+.++|.+++++++|++.++++|+.|++.+.+... . .+|.++|||++|+|+++|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~--~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-T--PLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-C--CCCcccccceeEEEEEeCCCcccCCC
Confidence 57899998887799999999999999999999999999999999888653 2 46789999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+..+|+.|.+|..++.+.|.........|...+|...+. .+|...+++.+.|+|++|+.++++.++++|+++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~ 156 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFT-CKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDA 156 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceee-ccCCccccccccccccceEEecCCceEECCCCC
Confidence 9999999889999999999999999987544322232222211110 011122333345799999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+++++.+||+++.+.+++++|++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++++++..
T Consensus 157 ~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 236 (365)
T cd05279 157 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236 (365)
T ss_pred CHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence 99999999999999999888889999999999998899999999999999995688888899999999999999999876
Q ss_pred CCCCc--CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhc-cCCceEEEEcccCCCCCcccchHhhhcceeEEeeecC
Q 016363 256 TCGDK--TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 332 (390)
Q Consensus 256 ~~~~~--~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (390)
+ . ++.+.+++++++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|+...
T Consensus 237 ~---~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~ 312 (365)
T cd05279 237 D---QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFG 312 (365)
T ss_pred c---ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEecc
Confidence 5 4 67778888775699999999997666889999999 88 9999998654333456666666557788888766
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
.....+.+.+++++++++.+++.++++++|+++++++|++.+.+++..|+++.
T Consensus 313 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 313 GWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred CCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 66667789999999999988876677899999999999999988776777763
No 31
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2.8e-45 Score=354.37 Aligned_cols=363 Identities=33% Similarity=0.615 Sum_probs=295.8
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|+|||+++.+++.++++.+.+.|++.++||+|||.++++|++|++...|..+ . .+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-T--PLPAVLGHEGAGVVEAVGSAVTGL 77 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-C--CCCcccccceeEEEEEeCCCcccC
Confidence 6899999999877799999999999999999999999999999999988654 2 468899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceee-ccccccccceeEEeeCCceEEcC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH-HFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~-~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
++||+|++.+. +|+.|.+|..++.++|.+.......|..++|.-.+.+..|.+.+ +....|+|++|+.++.+.++++|
T Consensus 78 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP 156 (365)
T cd08278 78 KPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD 156 (365)
T ss_pred CCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence 99999998764 89999999999999998754322223222221000000000000 01123689999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++++.+++++.|||.++.....++++++|||+|+|++|++++|+|+.+|+++|++++++++|.+.++++|++.++
T Consensus 157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i 236 (365)
T cd08278 157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVI 236 (365)
T ss_pred CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99999999999999999999887888999999999998899999999999999997799999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
++++ .++.+.+.+++++++|+++||+|....+..++++++++ |+++.+|.........++...+ .++.++.++..
T Consensus 237 ~~~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (365)
T cd08278 237 NPKE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIE 312 (365)
T ss_pred cCCC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeec
Confidence 8776 67888888888339999999999766689999999999 9999999653333345555555 45888888765
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
......+.+.+++++++++++++..++ ..|+++++++|++.+.++...|++++
T Consensus 313 ~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 313 GDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred CCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 443335677889999999988654445 68999999999999988777798874
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.7e-44 Score=347.29 Aligned_cols=342 Identities=25% Similarity=0.313 Sum_probs=284.5
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++. +.+.+.+.|.+.++||+|||.++++|++|++.+.+..... .+|.++|||++|+|+++|+++++|++
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGE--RHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCC--CCCcccCcceEEEEEEecCCcCccCC
Confidence 78999999986 8899999998999999999999999999999888765443 56889999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP 173 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p~ 173 (390)
||+|++.+..+|++|..|..++++.|.+...+...+... .|+|++|+.++.+ .++++|+
T Consensus 78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~-------------------~g~~~~y~~v~~~~~~~~~lP~ 138 (351)
T cd08285 78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFK-------------------DGVFAEYFHVNDADANLAPLPD 138 (351)
T ss_pred CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCC-------------------CcceeEEEEcchhhCceEECCC
Confidence 999999888899999999999999997643211111111 2589999999974 8999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.++..+.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++++++
T Consensus 139 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~ 217 (351)
T cd08285 139 GLTDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD 217 (351)
T ss_pred CCCHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEec
Confidence 999999999999999999985 7789999999999988999999999999999967999999999999999999999998
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh---hcceeEEee
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSVCGT 329 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~ 329 (390)
+.+ .++.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|........+++...+ ....++.+.
T Consensus 218 ~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~ 293 (351)
T cd08285 218 YKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGG 293 (351)
T ss_pred CCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEe
Confidence 876 6788888888776 8999999999877689999999999 9999999655332233332222 234555554
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccc-eeeeeccccHHHHHHHHhcCCc--eEEEEec
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEF-ITHEVSFHDINKAFDLLLEGKS--LRCIIWM 386 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~l~~~~~A~~~~~~~~~--~kvvl~~ 386 (390)
.... ..++++++++++.+|++++... +++.|+++++++|++.+.+++. +|+++++
T Consensus 294 ~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 294 LCPG--GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred ecCC--ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 3211 2467899999999999888443 4456999999999999988763 5999864
No 33
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=6.3e-45 Score=348.57 Aligned_cols=323 Identities=19% Similarity=0.228 Sum_probs=252.6
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC--CCCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--KLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
--|+++++++++ +++++++.|+ ++|||+|||+++|||++|++++.|..... ...+|.++|||++|+|+++|.+ +
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 357899999987 9999999995 99999999999999999999999865321 1257999999999999998874 7
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||++.+..+|+ |+.| +..+.|.+..+ .|...+ |+|+||+++|++.++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYD-------------------GFMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCC-------------------CceEEEEEEchHHeEECC
Confidence 9999999998887787 5566 35677865433 122222 489999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHH--HhCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEecCChhhHHHHHhcCCc
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~--~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+++++++|+.+ .++++||+++.. .+.+++|++|||+|+|++|++++|+++. +|..+|++++++++|++++++++.+
T Consensus 133 ~~l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 99999987755 478999998754 3457899999999999999999999986 6655899999999999999876654
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccC---hHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcce
Q 016363 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGR 324 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~ 324 (390)
..++ + +..+ ++|+|||++|+ +.++..+++.++++ |+++.+|.... ..+++...+ .+++
T Consensus 212 ~~~~-------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~ 274 (341)
T cd08237 212 YLID-------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEY--PVPINTRMVLEKGL 274 (341)
T ss_pred eehh-------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCC--CcccCHHHHhhCce
Confidence 3221 1 1123 79999999994 45688999999999 99999996532 234444444 4589
Q ss_pred eEEeeecCCCCchhhHHHHHHHHHcC---CCCCccceeeeeccc---cHHHHHHHHhcCCceEEEEecC
Q 016363 325 SVCGTYFGGLKPRSDIATLAQKYLDK---ELNLGEFITHEVSFH---DINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~l~---~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
++.|+..+. .++++++++++.++ +.++.++++++|+++ ++.+|++.+.++..+|+|+.++
T Consensus 275 ~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 275 TLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 999986432 46789999999999 446778899999986 5555555554444459999875
No 34
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.1e-43 Score=339.79 Aligned_cols=334 Identities=22% Similarity=0.377 Sum_probs=279.5
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++. +++.+++.|+|+++|++||+.++++|++|++.+.|..+.. .+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA--KYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC--CCCcccccceEEEEEEECCCCccCCC
Confidence 68999999886 9999999999999999999999999999999998876544 57899999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+..+|+.|.+|.++++++|.++.. .++..+ |+|++|+.++.+.++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~ 135 (339)
T PRK10083 78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRD-------------------GGFSEYAVVPAKNAHRIPDAI 135 (339)
T ss_pred CCEEEEccccCCCCCccccCcCcccCCCCce---EEEccC-------------------CcceeeEEechHHeEECcCCC
Confidence 9999999999999999999999999976543 122222 589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++.+++ +..++.++|. +.+..++++|++|+|+|+|++|++++|+|+. +|+..|+++++++++.++++++|+++++++
T Consensus 136 ~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~ 213 (339)
T PRK10083 136 ADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINN 213 (339)
T ss_pred CHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998876 4567888885 5578899999999999999999999999996 699668889999999999999999999987
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFG 332 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 332 (390)
++ .++.+.+.. .+ ++|++||++|+...+..++++++++ |+++.+|.... ...+....+. +++++.+...
T Consensus 214 ~~---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~- 284 (339)
T PRK10083 214 AQ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL- 284 (339)
T ss_pred cc---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec-
Confidence 65 566666643 23 6789999999876689999999999 99999996542 2223333333 4677776643
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC-c-eEEEEecCC
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIWMDK 388 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kvvl~~~~ 388 (390)
..+.+++++++++++++++..+++++|+++++++|++.+.++. . .|+++.+.+
T Consensus 285 ---~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 285 ---NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred ---ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 2467899999999998887666779999999999999987543 3 499998764
No 35
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=3.3e-43 Score=339.81 Aligned_cols=360 Identities=39% Similarity=0.680 Sum_probs=295.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++.++++.+++.|++++++|+|+|.++++|+.|+..+.|..+ . .+|.++|+|++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~--~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-A--PLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-C--CCCccccccceEEEEEeCCCccccCC
Confidence 79999999988899999999999999999999999999999998888654 2 46789999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+..+|++|.+|++++.+.|.+.... ..|...++..+... .|...+.....|+|++|+.++.+.++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 155 (363)
T cd08279 78 GDHVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFTA-DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI 155 (363)
T ss_pred CCEEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCcccccc-cCccccccccCccceeeEEeccccEEECCCCC
Confidence 99999999999999999999999999764210 01111111101100 12222222234789999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+++++.|||.++....+++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.+
T Consensus 156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~ 235 (363)
T cd08279 156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS 235 (363)
T ss_pred ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence 99999999999999999988889999999999997799999999999999995599999999999999999999999877
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG 333 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 333 (390)
. .++...+.+++++ ++|++||++++...+..++++++++ |+++.+|.........++...+. .+..+.++.++.
T Consensus 236 ~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (363)
T cd08279 236 E---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311 (363)
T ss_pred C---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence 6 6788888888766 8999999999766689999999999 99999986543234455555555 367777776654
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEE
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 384 (390)
....+.+++++++++++++++...+.++|+++++++|++.+.+++..|.|+
T Consensus 312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 445678999999999998887655778999999999999998887666554
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=9.5e-44 Score=348.49 Aligned_cols=335 Identities=21% Similarity=0.244 Sum_probs=266.7
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccccc-ccCCCC----CCCCCCcccccceeEEEEEeCC
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDL----PKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~----~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
|.||++++++++. +++.++|.|+|+++||+|||.++|||++|++.+ .|.... ....+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5689999999986 999999999999999999999999999999976 453211 0014788999999999999999
Q ss_pred CCC-cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC-
Q 016363 89 YVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT- 166 (390)
Q Consensus 89 ~v~-~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 166 (390)
+|+ .|++||||++.+...|+.|.+|.. .|...+ |+|+||++++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~-------------------G~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYP-------------------GGLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCC-------------------CcceEEEEecHHh
Confidence 998 599999999988888998887721 122222 489999999987
Q ss_pred ---ceEEcCCCCCcchhhcc-ccc-hhhHHHHH--------HHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeE
Q 016363 167 ---HVVKITPHIPLGIACLL-SCG-VSTGVGAA--------WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNR--ASKI 230 (390)
Q Consensus 167 ---~v~~~p~~~~~~~aa~~-~~~-~~tA~~~l--------~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g--~~~V 230 (390)
.++++|+++++++++.+ +.. ..++|.++ .+..++++|++|+|+|+ |++|++++|+|+.+| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 68999999999998865 211 12233332 24578999999999986 999999999999975 4579
Q ss_pred EEecCChhhHHHHHhc--------CCc-EEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCce
Q 016363 231 IGVDINPEKFEIGKKF--------GIT-DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGK 300 (390)
Q Consensus 231 i~~~~~~~~~~~~~~~--------g~~-~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~ 300 (390)
++++++++|++.++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|....++.++++++++ |+
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~ 283 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GC 283 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-Ce
Confidence 9999999999999997 666 4666542 14688888888887 9999999999877789999999998 88
Q ss_pred EEEEcccC-CCCCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC
Q 016363 301 TVILGVEM-HGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK 378 (390)
Q Consensus 301 ~v~~g~~~-~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~ 378 (390)
++.++... .....+++...+.. ++++.|+..+. .++++++++++++|++++.++++++|+|+++++|++.+..+.
T Consensus 284 ~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~ 360 (410)
T cd08238 284 LNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIP 360 (410)
T ss_pred EEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccC
Confidence 77665332 11123455544444 88999986433 467999999999999999889999999999999999998443
Q ss_pred ceEEEEecCC
Q 016363 379 SLRCIIWMDK 388 (390)
Q Consensus 379 ~~kvvl~~~~ 388 (390)
.+|+++.++.
T Consensus 361 ~gKvvl~~~~ 370 (410)
T cd08238 361 GGKKLIYTQK 370 (410)
T ss_pred CceEEEECCC
Confidence 4599998754
No 37
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=2.8e-43 Score=336.32 Aligned_cols=330 Identities=23% Similarity=0.392 Sum_probs=281.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||++++++++++++.+.+.|+++++||+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++|+++++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC--CCCcccCcceeEEEEEECCCCccCCC
Confidence 7999999996669999999999999999999999999999999988865433 56889999999999999999999999
Q ss_pred CCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||+|++.+ ...|++|.+|..++++.|..... .|+..+ |++++|+.++.+.++++|++
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~-------------------g~~a~~~~v~~~~~~~lp~~ 136 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRD-------------------GGYAEYMLAPAEALARIPDD 136 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccC-------------------CcceeEEEEchhheEeCCCC
Confidence 99998744 46899999999999999987543 233222 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++.+++.+++++.|||+++ +...++++++|||+|+|++|++++++|+.+|+ +|+++++++++.+.++++|+++++++
T Consensus 137 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~ 214 (333)
T cd08296 137 LDAAEAAPLLCAGVTTFNAL-RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDT 214 (333)
T ss_pred CCHHHhhhhhhhhHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecC
Confidence 99999999999999999988 45599999999999999999999999999999 89999999999999999999999987
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 333 (390)
.. .++.+.+.++ +++|++||++|....+..++++++++ |+++.+|... ...+++...+ .+++++.++..+.
T Consensus 215 ~~---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~ 286 (333)
T cd08296 215 SK---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT 286 (333)
T ss_pred CC---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC
Confidence 66 5677777665 37999999998666689999999999 9999999654 2344544433 4499999986433
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
..++..+++++++++++. .+ +.|+++++.+||+.+.+++.. |+|++
T Consensus 287 ---~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ---ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred ---HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 467888999998887654 35 689999999999999988775 99874
No 38
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=6.5e-43 Score=336.09 Aligned_cols=336 Identities=27% Similarity=0.423 Sum_probs=280.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-------CCCCCCcccccceeEEEEEeCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------PKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-------~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
|||+++++++. +++.+.+.|++.+++|+||+.++++|+.|+..+.|.... ....+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999999876 999999999999999999999999999999988875311 0014677899999999999999
Q ss_pred CCC--cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC
Q 016363 89 YVE--EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT 166 (390)
Q Consensus 89 ~v~--~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~ 166 (390)
.++ .|++||+|++.+..+|+.|.+|..+..+.|..... .|+... ..|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~-----------------~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNN-----------------VNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccC-----------------CCCcceeeEEcccc
Confidence 999 89999999999999999999999999999975422 222110 12589999999988
Q ss_pred -ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 167 -HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 167 -~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
.++++|+++++++++.+ .+++|+|+++ +..++++|++|+|.|+|.+|++++++|+.+|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999988 7899999987 88899999999997779999999999999998678899999999999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh--hc
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI--LK 322 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~--~~ 322 (390)
+|++.+++... .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|..... .++....+ .+
T Consensus 218 ~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~ 291 (350)
T cd08256 218 FGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGDRK 291 (350)
T ss_pred cCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhccc
Confidence 99999988765 6788888888877 8999999999766688899999999 999999854322 22333322 33
Q ss_pred ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 323 GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 323 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
++++.++.... ..+.+++++++++.+++..++.+.|+++++.+|++.++++... |+++
T Consensus 292 ~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 292 ELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred ccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 67777765443 4688899999999888765567999999999999999887765 8774
No 39
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.2e-42 Score=333.60 Aligned_cols=341 Identities=30% Similarity=0.437 Sum_probs=285.4
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++.+++. +.+.+.|.|.| .+++|+|||.++++|+.|++.+.|..+.. ++|.++|+|++|+|+++|++++.|+
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGA--KHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCC--CCCceeccceEEEEEEECCCccccC
Confidence 68999998877 89999999999 89999999999999999999998877654 6789999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|++.+..+|+.|.+|..+....|.+.......+.. ..|+|++|++++.+ .++++|
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~g~~~~~~~v~~~~~~~~~lP 138 (347)
T cd05278 78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR-------------------IDGGQAEYVRVPYADMNLAKIP 138 (347)
T ss_pred CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccC-------------------CCCeeeEEEEecchhCeEEECC
Confidence 999999999999999999999999999874322101111 12589999999987 899999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++++.+++++.|||+++ ...+++++++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.++
T Consensus 139 ~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi 217 (347)
T cd05278 139 DGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDII 217 (347)
T ss_pred CCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEE
Confidence 9999999999999999999987 778899999999987899999999999999965789998889999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (390)
++++ .++.+.+++++++ ++|++||++++...+..++++|+++ |+++.+|..............+.++..+.+...
T Consensus 218 ~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
T cd05278 218 NPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLV 293 (347)
T ss_pred cCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeecc
Confidence 8776 5688888888776 8999999999855589999999999 999999854332111122222345777776543
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-e-EEEEec
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-L-RCIIWM 386 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~-kvvl~~ 386 (390)
.. .+.+++++++++++++.+...+...|+++++++|++.+..++. . |+++++
T Consensus 294 ~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 294 PV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred Cc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 22 4678899999999988865556688999999999999887765 4 888763
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.6e-42 Score=331.86 Aligned_cols=334 Identities=28% Similarity=0.425 Sum_probs=286.3
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++.+++.++++.+.+.|++++++++||+.++++|++|+....|.... ....+|.++|+|++|+|+++|++++.|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 689999998777999999999999999999999999999999998876542 2125788999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++.++|.+... .|...+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTD-------------------GGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCC-------------------CcceeeEEecHHHeEECCCC
Confidence 99999999999999999999999999987654 233333 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| . +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999998666 46889999999999779999999999999 6 899999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 330 (390)
+++. . +.+.+++++++ ++|+++|++|+......++++++++ |+++.+|.... .+++... +.+++++.++.
T Consensus 218 ~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~ 289 (340)
T cd05284 218 NASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSL 289 (340)
T ss_pred cCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEe
Confidence 8876 4 88888888877 8999999999866689999999999 99999986542 2333333 44588888875
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
... .+.+.+++++++++.+++ .+ +.|+++++++|++.+.+++.. |+++.+
T Consensus 290 ~~~---~~~~~~~~~~l~~g~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 290 WGT---RAELVEVVALAESGKVKV--EI-TKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ccc---HHHHHHHHHHHHhCCCCc--ce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 432 567889999999998764 24 679999999999999887765 888754
No 41
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.8e-42 Score=335.71 Aligned_cols=353 Identities=26% Similarity=0.370 Sum_probs=286.2
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++++++. +++.+.+.|.| ++++|+||+.++++|++|+..+.|..+.. ++|.++|||++|+|+++|+++++|+
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM--KKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC--CCCccccccceEEEEEeCCCCCCCC
Confidence 78999998866 99999999988 49999999999999999999998876554 5788999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCC----CCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ce
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HV 168 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v 168 (390)
+||+|++.+..+|++|.+|..++.+.|.++.... ..|....+..++ ++ .. ....|+|++|+.++.+ .+
T Consensus 78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~-~~~~g~~~~~~~v~~~~~~~ 151 (386)
T cd08283 78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGY----SH-LT-GGYAGGQAEYVRVPFADVGP 151 (386)
T ss_pred CCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccccccc----cc-cc-CCCCCeeEEEEEcccccCeE
Confidence 9999999998899999999999999998754321 000000000000 00 00 0013689999999988 89
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~ 248 (390)
+++|+++++++++.+++.++|||+++ +..++++|++|||+|+|.+|++++++|+..|+.+|+++++++++.+.+++++.
T Consensus 152 ~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~ 230 (386)
T cd08283 152 FKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLG 230 (386)
T ss_pred EECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence 99999999999999999999999998 88899999999999889999999999999998569999999999999999844
Q ss_pred cEEEcCCCCCCc-CHHHHHHhhcCC-CccEEEEcccCh---------------------HHHHHHHHHhccCCceEEEEc
Q 016363 249 TDFINPATCGDK-TVSQVIKEMTDG-GADYCFECIGLT---------------------SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 249 ~~v~~~~~~~~~-~~~~~i~~~~~~-g~D~vid~~g~~---------------------~~~~~~~~~l~~~~G~~v~~g 305 (390)
..++++.. . ++.+.+.+++++ ++|+|||++|+. ..+..++++++++ |+++.+|
T Consensus 231 ~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g 306 (386)
T cd08283 231 AETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIG 306 (386)
T ss_pred cEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEc
Confidence 46777655 4 488888888887 899999999853 3478899999999 9999998
Q ss_pred ccCCCCCcccch-HhhhcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC-c-eEE
Q 016363 306 VEMHGSPISLNS-IEILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRC 382 (390)
Q Consensus 306 ~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~-~kv 382 (390)
..... ...++. ..+.++.++.+.... ..+.+.+++++++++++.+..++++.|+++++.+|++.+.++. . +|+
T Consensus 307 ~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~ 382 (386)
T cd08283 307 VYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKV 382 (386)
T ss_pred CCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEE
Confidence 65432 223343 234458888887532 2567899999999999887666778999999999999988765 3 499
Q ss_pred EEec
Q 016363 383 IIWM 386 (390)
Q Consensus 383 vl~~ 386 (390)
++++
T Consensus 383 ~~~~ 386 (386)
T cd08283 383 VLKP 386 (386)
T ss_pred EecC
Confidence 9863
No 42
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=5e-42 Score=329.28 Aligned_cols=337 Identities=29% Similarity=0.408 Sum_probs=286.3
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++.+++. +++.+.+.|+| .++||+|||+++++|+.|+..+.|..+.. ++|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV--TPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC--CCCceecccceEEEEEeccCccccC
Confidence 68999999887 99999999986 89999999999999999999998876554 5688999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|++.+..+|+.|.+|..+.++.|...... .|...+ |+|++|+.++.+ .++++|
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~~~lp 136 (345)
T cd08286 78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLID-------------------GTQAEYVRIPHADNSLYKLP 136 (345)
T ss_pred CCCEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccC-------------------CeeeeEEEcccccCceEECC
Confidence 999999999999999999999999999753221 122222 489999999987 899999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++.+++.+++.++|||+++....++++|++|||.|+|++|++++|+|+.+|+.+|+++++++++.+.++++|++.++
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v 216 (345)
T cd08286 137 EGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTV 216 (345)
T ss_pred CCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCcee
Confidence 99999999999999999999777788999999999998899999999999999944899999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 330 (390)
++.+ .++...+.+++++ ++|++|||+|....+..+++.++++ |+++.+|.... ...+++.. +.+++++.+..
T Consensus 217 ~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08286 217 NSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGL 290 (345)
T ss_pred cccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeec
Confidence 8876 5777888888777 8999999999876688999999999 99999986532 23444544 44588887753
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcC---CceEEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG---KSLRCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~---~~~kvvl~~ 386 (390)
.. .+.+..++++++++.+++.++++++|+++++++|++.+... ...|++|++
T Consensus 291 ~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 291 VD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred Cc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 22 24688899999999888776677999999999999998875 235999864
No 43
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.3e-41 Score=326.48 Aligned_cols=339 Identities=25% Similarity=0.410 Sum_probs=288.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++.++++.+.+.|.+.+++++||+.++++|+.|+..+.|..+.. .+|.++|+|++|+|+.+|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV--TLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCC--CCCeeeccceeEEEEEECCCCccCCC
Confidence 7999999988889999999999999999999999999999999988876544 56889999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP 173 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p~ 173 (390)
||+|+..+..+|++|.+|..++.+.|..... .++..+ |+|++|+.++.. .++++|+
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~~iP~ 136 (345)
T cd08260 79 GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHP-------------------GSFAEYVAVPRADVNLVRLPD 136 (345)
T ss_pred CCEEEECCCCCCCCCccccCcCcccCCCCcc---cccCCC-------------------CcceeEEEcccccCceEECCC
Confidence 9999987778999999999999999987532 233222 489999999974 8999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++++++.+++++.|||+++.+..++.++++|+|+|+|++|++++++|+.+|+ +|+++++++++.+.++++|++.+++
T Consensus 137 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~ 215 (345)
T cd08260 137 DVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN 215 (345)
T ss_pred CCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEc
Confidence 999999999999999999998788899999999999999999999999999999 8999999999999999999999987
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC-cccchHhh-hcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP-ISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~ 331 (390)
.++ ..++.+.+.++.++++|++||++|+.......+++++++ |+++.+|....... ..++...+ .++.++.+...
T Consensus 216 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08260 216 ASE--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292 (345)
T ss_pred ccc--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence 653 136777787776668999999999766688999999999 99999996543322 34444444 44788888754
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
. ..+.+++++++++++++.+...+.+.++++++++|++.+.++... |+|++
T Consensus 293 ~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 293 M---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred C---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 3 256788999999999888765567899999999999999887665 87763
No 44
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2.7e-42 Score=325.81 Aligned_cols=304 Identities=17% Similarity=0.244 Sum_probs=240.7
Q ss_pred eeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecc-cccccccccCCCCCC-CCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLC-HSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
+||++++.+++. +++.+.+.|+|++|||+|||++++|| ++|++.++|..+... ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999998876 99999999999999999999999996 699998888754321 2579999999999999999998 6
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||||+.. |..|.+|.. | . .|+|+||+++|++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~--~-------------------~G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G--L-------------------FGGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c--c-------------------CCcccceEEcCHHHceeCC
Confidence 9999999873 223333211 0 0 1589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++++. +.++ ...|||+++.+ . ..++++|||+|+|++|++++|+|+.+|++.|++++.++++++.+..+ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9999854 4454 57899998743 3 34689999999999999999999999996677788887777666543 344
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 331 (390)
++.+ . .++++|+||||+|+...++.++++++++ |+++.+|..... .+++... +.+++++.++..
T Consensus 192 ~~~~----~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~~~~~ 256 (308)
T TIGR01202 192 DPEK----D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEP--VNFDFVPAFMKEARLRIAAE 256 (308)
T ss_pred Chhh----c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCC--cccccchhhhcceEEEEecc
Confidence 4332 1 1238999999999987789999999999 999999975432 3333333 345788887754
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc-eEEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvl~ 385 (390)
.. .+++++++++++++++++.++++++|+|+++++|++.+.++.. +|++++
T Consensus 257 ~~---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 257 WQ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred cc---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 32 4679999999999999998889999999999999998776544 599874
No 45
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.4e-41 Score=326.89 Aligned_cols=338 Identities=28% Similarity=0.416 Sum_probs=283.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC----------CCCCCCcccccceeEEEEE
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPVIFGHEAVGVVES 85 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~~~~p~~~G~e~~G~V~~ 85 (390)
|||+++..++.++++.+.|.|+++++||+||+.++++|++|++.+.|..+. ...++|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 789999998888999999999999999999999999999999998875431 0114577899999999999
Q ss_pred eCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 86 vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
+|++++++++||+|++.+...|++|.+|.+++++.|.+... .|... .|+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQ-------------------DGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeec-------------------cCcceeeEEecH
Confidence 99999999999999999999999999999999999966432 11111 258999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+.++++|+++++.+++.+++.+.|||+++.....++++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999998776667789999999889999999999999999789999999999999999
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhccee
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 325 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 325 (390)
+|++.+++.++ .++.+.+.+..++++|++||++|....+..++++|+++ |+++.+|.........+.. ..+++.+
T Consensus 219 ~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~-~~~~~~~ 293 (350)
T cd08240 219 AGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPL-LPLRALT 293 (350)
T ss_pred hCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHH-HhhcCcE
Confidence 99988888765 56777777776668999999999766689999999999 9999998654332223322 2335778
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+.++.... .+++.+++++++++.+++. ....|+++++++|++.+.++... |+++.
T Consensus 294 i~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 294 IQGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 87775443 3678899999999987653 45789999999999999877665 88875
No 46
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2.3e-41 Score=327.36 Aligned_cols=360 Identities=32% Similarity=0.523 Sum_probs=291.0
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc---
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE--- 92 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 92 (390)
|||+++.+++.++++.+.|+|.+.++||+|++.++++|++|+..+.+..+. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF---PPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC---CCCcccccccceEEEEeCCCCCCCCc
Confidence 689999998777999999999999999999999999999999988876542 46789999999999999999988
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCC-CCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~-~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
|++||+|++.+..+|+.|.+|..+.+++|.+..+ .+..|...+|--.+....+...+. ...|+|++|+.++.+.++++
T Consensus 78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 78 LSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccc-ccCCcceeEEEechhhEEEC
Confidence 9999999999999999999999999999987531 111110111100000000000000 11368999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
|+++++.+++.+++.++|||+++.....+.++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++.+
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v 236 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT 236 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence 99999999999999999999998788888999999999879999999999999999459999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 329 (390)
++.++ .++.+.++++.++ ++|+|||++++....+.++++++++ |+++.+|.........++...+ .++.++.++
T Consensus 237 ~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T cd08263 237 VNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGS 312 (367)
T ss_pred ecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence 98876 6788888888776 8999999999874488999999999 9999998654332334444445 458887775
Q ss_pred ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 330 YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
.... .++.++.++++++++++++...+++.|+++++.+|++.+.++... |+|++
T Consensus 313 ~~~~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 313 YGAR--PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CCCC--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 3222 246788999999999888766577899999999999999887765 88874
No 47
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=3e-41 Score=329.50 Aligned_cols=348 Identities=18% Similarity=0.186 Sum_probs=281.5
Q ss_pred CCCCCccceeeEEEeec--CCC---CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC--------CCCCCc
Q 016363 7 SPKAGKVIRCKAAICRI--PGK---PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--------KLPLPV 73 (390)
Q Consensus 7 ~~~~~~~~t~~a~~~~~--~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~--------~~~~p~ 73 (390)
.|....|.+|||++++. ++. .+++.+.|.|+++++||+|||.++++|++|++.+.+..... ....+.
T Consensus 4 ~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~ 83 (393)
T cd08246 4 PPLGVVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH 83 (393)
T ss_pred CCCCcCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence 35556899999999863 332 37888999999999999999999999999998877652100 001235
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccc
Q 016363 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 153 (390)
++|||++|+|+++|++++.|++||+|++.+...|+.|..|..+..+.|..... +|+.. .
T Consensus 84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~------------------~ 142 (393)
T cd08246 84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYET------------------N 142 (393)
T ss_pred ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccC------------------C
Confidence 88999999999999999999999999999999999999999999999975432 23221 1
Q ss_pred ccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHH--hCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeE
Q 016363 154 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKI 230 (390)
Q Consensus 154 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~--~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~V 230 (390)
.|+|++|+.++...++++|+++++++++.++++++|||+++... +++++|++|+|+|+ |++|++++++|+.+|+ ++
T Consensus 143 ~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~v 221 (393)
T cd08246 143 YGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NP 221 (393)
T ss_pred CCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eE
Confidence 25899999999999999999999999999999999999988654 68999999999998 9999999999999999 88
Q ss_pred EEecCChhhHHHHHhcCCcEEEcCCCCC-------------------CcCHHHHHHhhcCC--CccEEEEcccChHHHHH
Q 016363 231 IGVDINPEKFEIGKKFGITDFINPATCG-------------------DKTVSQVIKEMTDG--GADYCFECIGLTSVMND 289 (390)
Q Consensus 231 i~~~~~~~~~~~~~~~g~~~v~~~~~~~-------------------~~~~~~~i~~~~~~--g~D~vid~~g~~~~~~~ 289 (390)
+++++++++.+.++++|+++++++++.+ ...+.+.+.+++++ ++|++||++|+.. +..
T Consensus 222 v~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~ 300 (393)
T cd08246 222 VAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPT 300 (393)
T ss_pred EEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHH
Confidence 8899999999999999999999864310 01356778888776 7999999999854 889
Q ss_pred HHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHH
Q 016363 290 AFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDIN 368 (390)
Q Consensus 290 ~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 368 (390)
++++++++ |+++.+|..... ..+++...+ .++.++.++.... .+++.+++++++++.+.+ .++++|++++++
T Consensus 301 ~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~ 373 (393)
T cd08246 301 SVFVCDRG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETP 373 (393)
T ss_pred HHHHhccC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHH
Confidence 99999999 999999864322 123333333 3477888875543 457888999999997764 367899999999
Q ss_pred HHHHHHhcC-Cce-EEEE
Q 016363 369 KAFDLLLEG-KSL-RCII 384 (390)
Q Consensus 369 ~A~~~~~~~-~~~-kvvl 384 (390)
+|++.+.++ ... |+++
T Consensus 374 ~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 374 DAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred HHHHHHHhCccccceEEE
Confidence 999999877 554 8776
No 48
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=9.7e-41 Score=320.28 Aligned_cols=335 Identities=27% Similarity=0.411 Sum_probs=280.2
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++++++. +++.+.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT---RAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC---CCCcccccceEEEEEEeCCCCCccC
Confidence 68999998876 99999999986 8999999999999999999998886542 3578999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|++....+|+.|.+|..++.+.|....+ .+...+ |+|++|+.++.+ .++++|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~~lP 134 (345)
T cd08287 77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVD-------------------GGQGEYVRVPLADGTLVKVP 134 (345)
T ss_pred CCCEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCC-------------------CceEEEEEcchhhCceEECC
Confidence 99999986677899999999999999986443 222233 489999999975 999999
Q ss_pred CCCCcchhh-----ccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 173 PHIPLGIAC-----LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 173 ~~~~~~~aa-----~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
+++++..+. .+...++|||+++ ..+++++|++|+|.|+|++|++++|+|+.+|++.++++++++++.++++++|
T Consensus 135 ~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g 213 (345)
T cd08287 135 GSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFG 213 (345)
T ss_pred CCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence 999882221 2235788999987 5789999999999888999999999999999966999998988999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-Hhhhccee
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRS 325 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~ 325 (390)
++.++++.. .++.+.+.+++++ ++|+++|++|+...+..++++++++ |+++.+|.... ...++. ..+.++.+
T Consensus 214 a~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~ 287 (345)
T cd08287 214 ATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVG 287 (345)
T ss_pred CceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceE
Confidence 999998876 6788888888877 9999999999877789999999999 99999986542 234444 33555888
Q ss_pred EEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 326 VCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
+.+.... ..+.+.+++++++++++++..+++++++++++++|++.+.+....|++|++
T Consensus 288 ~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 288 LAGGPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred EEEecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 8775322 246789999999999888766567999999999999998877666999863
No 49
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.1e-40 Score=319.81 Aligned_cols=338 Identities=27% Similarity=0.381 Sum_probs=278.4
Q ss_pred eeEEEeecCCCCcEEEEeecCCCC-CCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++..++. +++.+.++|+|. ++||+|++.++++|+.|+....|..+ . .+|.++|+|++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~--~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-S--TPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-C--CCCcccccceEEEEEeeCCCccccC
Confidence 68899988754 999999999875 99999999999999999998888654 2 4578899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|++.+..+|++|.+|..+..+.|++.... |.. + .....|+|++|+.++++ .++++|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~-------------~~~~~g~~~~~~~v~~~~~~~~~~p 138 (344)
T cd08284 77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLF---GYA--G-------------SPNLDGAQAEYVRVPFADGTLLKLP 138 (344)
T ss_pred CCCEEEEcccCCCCCChHHhCcCcccCCCCccc---ccc--c-------------cCCCCCceeEEEEcccccCceEECC
Confidence 999999999899999999999999999764321 110 0 00112589999999875 999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++++++.++++++|||+++. ..++++|++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|+. .+
T Consensus 139 ~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~ 216 (344)
T cd08284 139 DGLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PI 216 (344)
T ss_pred CCCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EE
Confidence 99999999999999999999884 58899999999998899999999999999975799998889999999999975 45
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hhhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~ 330 (390)
+.+. .++...+.+++++ ++|++||++++...+..++++++++ |+++.+|..... ....... .+.++.++.+..
T Consensus 217 ~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 291 (344)
T cd08284 217 NFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR 291 (344)
T ss_pred ecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec
Confidence 5544 5688888888876 9999999999876689999999999 999999965422 2222333 244477776542
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
....+.+.+++++++++++++.++++++|+++++++|++.+.++...|+|++
T Consensus 292 ---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 ---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred ---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 1235678999999999988876556789999999999999887655788875
No 50
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=9.1e-41 Score=320.05 Aligned_cols=339 Identities=27% Similarity=0.410 Sum_probs=275.7
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++.++++.+++.+.|.|+|+++|++||++++++|++|+.++.+... .....+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 68999999887799999999999999999999999999999998765321 11124678899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++.++|..... .+...+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRP-------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCC-------------------CcceeeEEechHHeEECcCC
Confidence 99999999999999999999999999976422 222222 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++.+++.+ ..+.++++++.. ...+|++|+|.|+|++|++++|+|+.+|+++|+++++++++.+.++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888754 466777665532 35689999998889999999999999998668888889999999999999999987
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
++ .++.+.+++++.+ ++|+||||+|+...++.++++++++ |+++.+|........++ ...+.++.++.++....
T Consensus 216 ~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~ 290 (341)
T PRK05396 216 AK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGRE 290 (341)
T ss_pred cc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccC
Confidence 76 6788888888876 9999999999877789999999999 99999986543222222 22233477777764221
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEecC
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 387 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~~ 387 (390)
..+.+..++++++++ +.+.+.+.+.|+++++++|++.+.++..+|++++++
T Consensus 291 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 291 --MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred --ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 124466788899888 545555779999999999999988776459999764
No 51
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=5.4e-41 Score=319.41 Aligned_cols=310 Identities=19% Similarity=0.223 Sum_probs=256.1
Q ss_pred eeEEEeecCCCC-----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 16 CKAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 16 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
|||+++.+++.+ +++.+.|.|.|+++||+||+.++++|++|++.+.|..+.. ..+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~-~~~p~v~G~e~~G~V~~vG~~v 79 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGST-KALPVPPGFEGSGTVVAAGGGP 79 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC-CCCCcCCCcceEEEEEEECCCc
Confidence 689999998853 7888889999999999999999999999999998865432 1578999999999999999999
Q ss_pred Cc-CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 91 EE-VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 91 ~~-~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
++ |++||+|++... .+ |+|++|+.++++.++
T Consensus 80 ~~~~~vGd~V~~~~~-----------------------------~~-------------------g~~a~~~~v~~~~~~ 111 (324)
T cd08291 80 LAQSLIGKRVAFLAG-----------------------------SY-------------------GTYAEYAVADAQQCL 111 (324)
T ss_pred cccCCCCCEEEecCC-----------------------------CC-------------------CcchheeeecHHHeE
Confidence 96 999999986421 01 489999999999999
Q ss_pred EcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEE-cC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF-GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 170 ~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~-Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
++|+++++++++++++..+|||.. ....++ ++++++|+ |+ |++|++++|+|+.+|+ +|+++++++++.++++++|
T Consensus 112 ~iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g 188 (324)
T cd08291 112 PLPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIG 188 (324)
T ss_pred ECCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC
Confidence 999999999999888889999854 455665 56666665 55 9999999999999999 8999999999999999999
Q ss_pred CcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhccee
Q 016363 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRS 325 (390)
Q Consensus 248 ~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~ 325 (390)
+++++++++ .++.+.+++++++ ++|++||++|+.. ....+++++++ |+++.+|.........++... +.++++
T Consensus 189 ~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 263 (324)
T cd08291 189 AEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKS 263 (324)
T ss_pred CcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcE
Confidence 999998876 6898999998887 9999999999877 67789999999 999999965433221243333 445888
Q ss_pred EEeeecCCCC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 326 VCGTYFGGLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 326 i~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+.++....+. ..+++++++++++ +++ ++.++++|+|+++.+|++.+.++... |+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 264 IEGFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 8888765432 2456888888887 654 45688999999999999999887664 99873
No 52
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2.7e-40 Score=316.22 Aligned_cols=333 Identities=30% Similarity=0.516 Sum_probs=281.3
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++. +++.+++.|++.++|++|+|.++++|+.|+....+..+.. .+|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA--SYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC--CCCcccccccEEEEEEeCCCCCCCCC
Confidence 68999998876 8999999999999999999999999999999988876554 56789999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|+..+..+|+.|..|..++.+.|.+.+. .++.. .|+|++|+.++++ ++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~g~~~~~v~v~~~-~~~~p~~~ 134 (337)
T cd08261 78 GDRVVVDPYISCGECYACRKGRPNCCENLQV---LGVHR-------------------DGGFAEYIVVPAD-ALLVPEGL 134 (337)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCe---eeecC-------------------CCcceeEEEechh-eEECCCCC
Confidence 9999998888999999999999999954321 12211 2589999999999 99999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+ ..+.++++.+ ...++++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.++++++|+++++++.
T Consensus 135 ~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~ 211 (337)
T cd08261 135 SLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG 211 (337)
T ss_pred CHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc
Confidence 99999877 5788888876 78899999999999889999999999999999 899999999999999999999999887
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (390)
+ .++.+.+.+++++ ++|++||++|+...+..++++|+++ |+++.+|.... ...++...+.. ++++.+..
T Consensus 212 ~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~--- 282 (337)
T cd08261 212 D---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKG--PVTFPDPEFHKKELTILGSR--- 282 (337)
T ss_pred c---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCC--CCccCHHHHHhCCCEEEEec---
Confidence 6 6788888888877 8999999998866689999999999 99999986542 22333433443 67777653
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC-ce-EEEEec
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-SL-RCIIWM 386 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~-kvvl~~ 386 (390)
....+.+++++++++++.+++.+.+...++++++.+|++.+.+++ .. |+|+++
T Consensus 283 ~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 283 NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 223567889999999998887434668999999999999998873 54 999864
No 53
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.9e-40 Score=321.85 Aligned_cols=346 Identities=26% Similarity=0.379 Sum_probs=277.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++.+++. ++++++|+|.+ +++|++|||+++++|++|++.+.|..+ . .+|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~--~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-A--EPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-C--CCCceeccccEEEEEEeCCCCCcCC
Confidence 68899988874 99999999985 799999999999999999999988665 2 4688999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p 172 (390)
+||+|+..+..+|+.|..|..++.+.|.+....+..+ ..+. ++ . ....|+|++|+.++.+ .++++|
T Consensus 77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~--~~~~------~~--~--~~~~g~~a~y~~v~~~~~~~~~lP 144 (375)
T cd08282 77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGG--AYGY------VD--M--GPYGGGQAEYLRVPYADFNLLKLP 144 (375)
T ss_pred CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccc--cccc------cc--c--CCCCCeeeeEEEeecccCcEEECC
Confidence 9999999999999999999999999997643221000 0000 00 0 0012689999999976 899999
Q ss_pred CCCCcc---hhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 173 PHIPLG---IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 173 ~~~~~~---~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+++++. +++.++++++|||+++ ..+++++|++|+|.|+|++|++++|+|+++|+.+|+++++++++.+.++++|+.
T Consensus 145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 223 (375)
T cd08282 145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI 223 (375)
T ss_pred CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe
Confidence 999998 5677888899999988 888999999999988899999999999999976799999999999999999984
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH-----------HHHHHHHHhccCCceEEEEcccCCC--------
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVILGVEMHG-------- 310 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~-------- 310 (390)
.+++.+ .++.+.+.+++++++|++|||+|... ++..++++++++ |+++.+|.....
T Consensus 224 -~v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~ 298 (375)
T cd08282 224 -PIDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA 298 (375)
T ss_pred -EeccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence 566655 67888888877668999999999763 478899999999 999888854311
Q ss_pred ---CCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 311 ---SPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 311 ---~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
....++...+.. +..+.+.... ..+.+..++++++++++++..++++.|+++++++|++.+.++...|+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 299 AKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 012233333333 5556555322 246788899999999888765678999999999999999888733998863
No 54
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.1e-40 Score=318.35 Aligned_cols=330 Identities=28% Similarity=0.382 Sum_probs=276.8
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.++++++++++.|.|.+.+||++||+.++++|+.|+....|..+.. .+|.++|+|++|+|+.+|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM--KYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC--CCCeeccccceEEEEEeCCCCccCCC
Confidence 6899999998889999999999999999999999999999999888866544 56789999999999999999988999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++....+|+.|++|..++.+.|..... +|...+ |+|++|+.++.+.++++|+++
T Consensus 79 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~ 136 (334)
T PRK13771 79 GDRVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELD-------------------GFFAEYAKVKVTSLVKVPPNV 136 (334)
T ss_pred CCEEEECCCCCCcCChhhcCCCcccCccccc---cccccC-------------------ceeeeeeecchhceEECCCCC
Confidence 9999999888999999999999999977432 233223 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++.+++.+++.+.+||+++... .++++++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++ ++++++.
T Consensus 137 ~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~ 213 (334)
T PRK13771 137 SDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVG 213 (334)
T ss_pred CHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCc
Confidence 9999999999999999988555 9999999999998 9999999999999999 899999999999999888 6666654
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 333 (390)
+ ++.+.++++ +++|++|||+|+.. +..++++++++ |+++.+|.......+..... .+.+++++.+...
T Consensus 214 ~-----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 282 (334)
T PRK13771 214 S-----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS-- 282 (334)
T ss_pred h-----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC--
Confidence 2 355566654 37999999999876 88999999999 99999996543222122221 2445788887642
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
...++++.++++++++.++. .+.+.|+++++++|++.+.++... |+++.+
T Consensus 283 -~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 283 -ATKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred -CCHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 23578999999999997753 367899999999999999877655 988864
No 55
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=3.7e-40 Score=318.66 Aligned_cols=340 Identities=23% Similarity=0.402 Sum_probs=270.8
Q ss_pred ceeeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCCCc
Q 016363 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 14 ~t~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
..++++++..++. +++.+.+.|+++++||+||+.++++|++|++.+.+..... ...+|.++|||++|+|+++|++++.
T Consensus 16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 3345555566655 8888998888999999999999999999999887632111 1135778999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||+|++.+..+|+.|..|.++.++.|++..+ .+... ..|+|++|+.++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~------------------~~g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPP------------------VHGSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCC------------------CCCcccceEEcchHHeEECC
Confidence 9999999999999999999999999999987432 11111 12589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++++.+++.. .++.++|+++ ...++.+|++|||+|+|++|++++++|+.+|+..|+++++++++.++++++|++.++
T Consensus 154 ~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 99999998763 2455688876 788899999999998899999999999999996788999899999999999999887
Q ss_pred cCCCCCCcCHHHHHHhh---cCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEe
Q 016363 253 NPATCGDKTVSQVIKEM---TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~---~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 328 (390)
++.. ...++.+.+.++ .++++|+|||++|+...+..++++++++ |+++.+|..... ..+....+ .+++++.+
T Consensus 232 ~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~ 307 (364)
T PLN02702 232 LVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVG 307 (364)
T ss_pred ecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEE
Confidence 6532 124576666654 2338999999999766689999999999 999999964322 22333333 44888888
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeecc--ccHHHHHHHHhcCCce-EEEEe
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSF--HDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
++.. ...+..++++++++++++.++++++|++ +++++|++.+.++... |+++.
T Consensus 308 ~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 308 VFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred eccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 7532 3568889999999988766667788665 7999999998877665 99885
No 56
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.1e-40 Score=316.50 Aligned_cols=336 Identities=29% Similarity=0.470 Sum_probs=281.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
||++++.+++. +.+.+.+.|++.+++|+|||.++++|+.|+..+.|..... ..|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~--~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDL--KPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccC--CCCcccccceEEEEEeeCCCCCCCCC
Confidence 68999998875 8999999999999999999999999999999988765422 45779999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCc-----eEE
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-----VVK 170 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----v~~ 170 (390)
||+|++.+..+|++|.+|..++.++|..... .|.... |+|++|+.++.+. +++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~~~~~~ 135 (343)
T cd08235 78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYD-------------------GGFAEYVRVPAWAVKRGGVLK 135 (343)
T ss_pred CCEEEEccCCCCCCChHHHCcCcccCCCcce---eccCCC-------------------CcceeeEEecccccccccEEE
Confidence 9999999999999999999999999976432 122222 4899999999998 999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++++.+++.+ +++.+||+++ ...++++|++|||+|+|.+|++++|+|+..|++.|+++++++++.+.++++|.++
T Consensus 136 lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~ 213 (343)
T cd08235 136 LPDNVSFEEAALV-EPLACCINAQ-RKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY 213 (343)
T ss_pred CCCCCCHHHHHhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcE
Confidence 9999999999876 7889999988 4558999999999988999999999999999933999999999999998999999
Q ss_pred EEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEe
Q 016363 251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCG 328 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g 328 (390)
++++++ .++.+.+++++++ ++|+||||+++...+...+++++++ |+++.+|.........++...+. ++..+.+
T Consensus 214 ~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~ 289 (343)
T cd08235 214 TIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITG 289 (343)
T ss_pred EecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEE
Confidence 998876 6788888888877 8999999999876588999999999 99999986543322333333333 4777776
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEe
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 385 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~ 385 (390)
+.... .+.++.++++++++++.+...+..+|+++++.+|++.+.+++..|+|+.
T Consensus 290 ~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 290 SYAAS---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred EecCC---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 64332 4678889999999988764456689999999999999988873388863
No 57
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2e-40 Score=317.26 Aligned_cols=334 Identities=24% Similarity=0.367 Sum_probs=278.0
Q ss_pred eEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCC
Q 016363 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (390)
Q Consensus 17 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 96 (390)
|+++++.++..|++.+++.|+|+++|++||+.++++|++|++.+.|..... .+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPT--KYPLVPGHEIVGIVVAVGSKVTKFKVG 78 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCC--CCCcccCcceeeEEEEECCCCcccCCC
Confidence 578889888779999999999999999999999999999999998876444 578999999999999999999999999
Q ss_pred CEEe-eecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 97 DLVL-PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 97 d~V~-~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
|+|+ .....+|++|.+|..++.+.|......+. |....+ ....|+|++|+.++.+.++++|+++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~ 143 (337)
T cd05283 79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYN-GKYPDG--------------TITQGGYADHIVVDERFVFKIPEGL 143 (337)
T ss_pred CEEEEecCCCCCCCCccccCCchhcCcchhhccc-ccccCC--------------CcCCCcceeEEEechhheEECCCCC
Confidence 9997 45566899999999999999987544321 111111 0112589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+++.+.|||+++ +..++++|++|+|.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 144 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~ 221 (337)
T cd05283 144 DSAAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK 221 (337)
T ss_pred CHHHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc
Confidence 9999999999999999987 55679999999998889999999999999999 999999999999999999999988765
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 334 (390)
. .++.+. ..+++|++|||+|.......++++++++ |+++.+|...... .+++..+ .++.++.++....
T Consensus 222 ~---~~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~- 290 (337)
T cd05283 222 D---PEAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG- 290 (337)
T ss_pred c---hhhhhh----ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC-
Confidence 4 333221 2348999999999876588999999999 9999999654322 4444443 4588999887653
Q ss_pred CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 335 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
.++++.++++++++++++ .+ +.|+++++++||+.+.++... |+|++
T Consensus 291 --~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 291 --RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred --HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 578999999999998764 35 789999999999999988875 98874
No 58
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=3.3e-40 Score=322.53 Aligned_cols=347 Identities=20% Similarity=0.198 Sum_probs=281.0
Q ss_pred CccceeeEEEeec--CCC---CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC--------CCCCCC-cccc
Q 016363 11 GKVIRCKAAICRI--PGK---PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL--------PKLPLP-VIFG 76 (390)
Q Consensus 11 ~~~~t~~a~~~~~--~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~--------~~~~~p-~~~G 76 (390)
..|.+|||+++.. +++ .+++.+.|.|.|++++++||+.++++|+.|++...+.... .....| .++|
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G 82 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIG 82 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecc
Confidence 4678899999965 554 3899999999999999999999999999998776553210 000123 3799
Q ss_pred cceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccc
Q 016363 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS 156 (390)
Q Consensus 77 ~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~ 156 (390)
||++|+|+++|++++.|++||+|++....+|++|++|..++.+.|..... .|... ..|+
T Consensus 83 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~------------------~~g~ 141 (398)
T TIGR01751 83 SDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYET------------------NFGS 141 (398)
T ss_pred cceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccC------------------CCcc
Confidence 99999999999999999999999999999999999999999999965432 12111 1258
Q ss_pred cceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHH--HhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 157 ~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~--~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
|++|+.++.+.++++|+++++++++.+++++.|||+++.. ..++.+|++|+|+|+ |++|++++++|+.+|+ +++++
T Consensus 142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~ 220 (398)
T TIGR01751 142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV 220 (398)
T ss_pred ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence 9999999999999999999999999999999999998754 477899999999998 9999999999999999 88888
Q ss_pred cCChhhHHHHHhcCCcEEEcCCCCC-------------------CcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHH
Q 016363 234 DINPEKFEIGKKFGITDFINPATCG-------------------DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNS 293 (390)
Q Consensus 234 ~~~~~~~~~~~~~g~~~v~~~~~~~-------------------~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~ 293 (390)
++++++.+.++++|++.++++++.+ ...+.+.+.+++++ ++|++|||+|... +..++++
T Consensus 221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~ 299 (398)
T TIGR01751 221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFV 299 (398)
T ss_pred cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHh
Confidence 8999999999999999999875410 01255667777776 8999999999755 8899999
Q ss_pred hccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHH
Q 016363 294 SREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFD 372 (390)
Q Consensus 294 l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~ 372 (390)
++++ |+++.+|..... ..+++...+ ..+.++.++.+.. .+++++++++++++++... ++++++++++++|++
T Consensus 300 l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~ 372 (398)
T TIGR01751 300 CRRG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQ 372 (398)
T ss_pred hccC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHH
Confidence 9999 999999965432 123333333 3477777775443 3567889999999977643 679999999999999
Q ss_pred HHhcCCce-EEEEecC
Q 016363 373 LLLEGKSL-RCIIWMD 387 (390)
Q Consensus 373 ~~~~~~~~-kvvl~~~ 387 (390)
.+.++... |+|+++.
T Consensus 373 ~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 373 DVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHcCCCCceEEEEeC
Confidence 99887765 9998875
No 59
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.9e-40 Score=315.59 Aligned_cols=325 Identities=21% Similarity=0.353 Sum_probs=263.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---------CCCCCCCcccccceeEEEEEe
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---------LPKLPLPVIFGHEAVGVVESV 86 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---------~~~~~~p~~~G~e~~G~V~~v 86 (390)
|||+++..+ ++++++++.|++++++|+|||.++++|+.|++...|... .....+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 688998876 599999999999999999999999999999999887321 001135789999999999999
Q ss_pred CCCCCc-CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC
Q 016363 87 GEYVEE-VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (390)
Q Consensus 87 G~~v~~-~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (390)
|+++++ |++||+|++.+...|+.|+.|..+..+ . ..|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~-------------~-------------------~~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP-------------E-------------------APGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc-------------C-------------------CCCceeeeEEech
Confidence 999987 999999999999999999999432110 0 1258999999999
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
+.++++|+++++++++ +++++++||+++ ...++++|++|||+|+|++|++++|+|+.+|++.++++++++++.+.+++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999887 667889999984 88999999999999889999999999999999668888889999999999
Q ss_pred cCCcEEEcCCCCCCcCHHH---HHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-h
Q 016363 246 FGITDFINPATCGDKTVSQ---VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-I 320 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~---~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~ 320 (390)
+|++++++++. .+..+ .+.+...+ ++|++||++|+...+..++++++++ |+++.+|....... +.+.. +
T Consensus 205 ~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~ 278 (341)
T cd08262 205 MGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAI 278 (341)
T ss_pred cCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHh
Confidence 99998998765 32211 34445555 8999999999854588899999999 99999986532222 22222 3
Q ss_pred hcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 321 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
.++.++.++... ..+.+.+++++++++++++.+++.+.|+++++++|++.+.++... |+|++
T Consensus 279 ~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 279 RKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred hcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 347777655322 245788999999999988766677999999999999999887765 98874
No 60
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-40 Score=316.96 Aligned_cols=318 Identities=21% Similarity=0.240 Sum_probs=255.0
Q ss_pred CCccceeeEEEeec-CCC-----CcEEEEe---ecC-CCCCCeEEEEEeeeecccccccccccCCCCCCCCCCccccc--
Q 016363 10 AGKVIRCKAAICRI-PGK-----PLVIEEI---EVE-PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGH-- 77 (390)
Q Consensus 10 ~~~~~t~~a~~~~~-~~~-----~~~~~~~---~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~-- 77 (390)
++.+.+.|.+++.. +.+ .|++.+. +.| ++++|||||||.++++|+.|.....+..... ..|.++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~--~~p~~~G~~~ 80 (348)
T PLN03154 3 EGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSY--LPPFVPGQRI 80 (348)
T ss_pred CCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCC--CCCcCCCCee
Confidence 35667778888854 322 2888774 555 3589999999999999999876544322222 36889998
Q ss_pred ceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccccccc
Q 016363 78 EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSF 157 (390)
Q Consensus 78 e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~ 157 (390)
|++|+|..+|++++.|++||+|++. |+|
T Consensus 81 ~~~G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~ 108 (348)
T PLN03154 81 EGFGVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGW 108 (348)
T ss_pred EeeEEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCc
Confidence 8899999999999999999999753 379
Q ss_pred ceeEEeeCCc--eEE--cCCCCCcc-hhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEE
Q 016363 158 TEYSVVDITH--VVK--ITPHIPLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKII 231 (390)
Q Consensus 158 a~~~~v~~~~--v~~--~p~~~~~~-~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi 231 (390)
+||.+++.+. +++ +|++++++ +++.++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+
T Consensus 109 aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi 187 (348)
T PLN03154 109 EEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVV 187 (348)
T ss_pred EEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEE
Confidence 9999998753 544 48999987 688899999999999878889999999999998 9999999999999999 899
Q ss_pred EecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC
Q 016363 232 GVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG 310 (390)
Q Consensus 232 ~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 310 (390)
++++++++.+.++ ++|++.++++.+ ..++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|.....
T Consensus 188 ~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~-~~~~~~~l~~~-G~iv~~G~~~~~ 263 (348)
T PLN03154 188 GSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGDM-LDAALLNMKIH-GRIAVCGMVSLN 263 (348)
T ss_pred EEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHHhccC-CEEEEECccccC
Confidence 9999999999997 799999998764 136778888877668999999999864 89999999999 999999965422
Q ss_pred CC-c---ccchHh-hhcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EE
Q 016363 311 SP-I---SLNSIE-ILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RC 382 (390)
Q Consensus 311 ~~-~---~~~~~~-~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 382 (390)
.. . .++... +.+++++.|+....+. ..+.++++++++++|++++. ++.+|+|+++++|++.+++++.. |+
T Consensus 264 ~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKv 341 (348)
T PLN03154 264 SLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQ 341 (348)
T ss_pred CCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceE
Confidence 10 0 112333 3448888888654321 13567889999999988754 66789999999999999988876 99
Q ss_pred EEecCC
Q 016363 383 IIWMDK 388 (390)
Q Consensus 383 vl~~~~ 388 (390)
|+++++
T Consensus 342 Vl~~~~ 347 (348)
T PLN03154 342 VIRVAK 347 (348)
T ss_pred EEEecC
Confidence 999865
No 61
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.6e-40 Score=315.42 Aligned_cols=333 Identities=29% Similarity=0.469 Sum_probs=273.1
Q ss_pred EEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCCCcccccceeEEEEEeCCCCCcCCCC
Q 016363 18 AAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (390)
Q Consensus 18 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 96 (390)
|+++++++. +.+.+.+.|.+.++||+|+|.++++|+.|++.+.+.. ......+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467788855 9999999999999999999999999999998764321 11101357789999999999999999999999
Q ss_pred CEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCC
Q 016363 97 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP 176 (390)
Q Consensus 97 d~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~ 176 (390)
|+|++.+..+|++|++|+.+.+++|++..... ..... |+|++|++++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAA--TPPVD-------------------GTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCccccc--cccCC-------------------CceeeeEEecHHHcEECcCCCC
Confidence 99999899999999999999999998753310 00111 5899999999999999999999
Q ss_pred cchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCC
Q 016363 177 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256 (390)
Q Consensus 177 ~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~ 256 (390)
+.+++.+ .++++||+++ +..++++|++|||.|+|.+|++++|+|+.+|+++|+++++++++.+.++++|++.+++.++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999877 5788999986 8899999999999988999999999999999944999999999999999999999998766
Q ss_pred CCCcC---HHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeec
Q 016363 257 CGDKT---VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYF 331 (390)
Q Consensus 257 ~~~~~---~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 331 (390)
.+ +.+.+.+.+++ ++|++|||+|+...++..+++++++ |+++.+|..... ..++... ..+++++.++..
T Consensus 217 ---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd05285 217 ---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFR 290 (343)
T ss_pred ---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEecc
Confidence 44 37778887777 8999999999875589999999999 999999854432 2223222 334677776642
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCC--ceEEEE
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK--SLRCII 384 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~--~~kvvl 384 (390)
. .+.+++++++++++++.+.+.++++|+++++.+|++.+.++. .+|+++
T Consensus 291 ~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 291 Y----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred C----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 2 267888999999998766555778999999999999998774 369987
No 62
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.2e-39 Score=311.82 Aligned_cols=333 Identities=27% Similarity=0.406 Sum_probs=274.3
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
||++++++++...++++.|.|++.++|++|||.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++.|++
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVTSLKV 77 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCccCCC
Confidence 789999998874448899999999999999999999999999988886532 24678999999999999999999999
Q ss_pred CCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||+|++.+ ..+|+.|.+|..+..+.|.+... .|+..+ |+|++|+.++.+.++++|++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~ 135 (338)
T PRK09422 78 GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVD-------------------GGMAEQCIVTADYAVKVPEG 135 (338)
T ss_pred CCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCcccc-------------------CcceeEEEEchHHeEeCCCC
Confidence 99998754 45899999999999999976532 233333 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+++.+++.+++.+.|||+++ ..+++++|++|||+|+|++|++++++|+. .|+ +|+++++++++.+.++++|++.+++
T Consensus 136 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 213 (338)
T PRK09422 136 LDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTIN 213 (338)
T ss_pred CCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEec
Confidence 99999999999999999987 78899999999999999999999999998 599 8999999999999999999999888
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 332 (390)
++. ..++.+.+++..+ ++|+++.+.++...+..++++++.+ |+++.+|.... ..+++...+ .++..+.++..+
T Consensus 214 ~~~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 287 (338)
T PRK09422 214 SKR--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG 287 (338)
T ss_pred ccc--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC
Confidence 642 1356777777765 6895555555555689999999999 99999986532 233333322 346777776433
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
. .++++.+++++++++++. .+ ..++++++++|++.+.++... |+++.+.
T Consensus 288 ~---~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 288 T---RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred C---HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 2 567889999999997754 35 468999999999999887776 9998754
No 63
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.9e-39 Score=310.84 Aligned_cols=335 Identities=27% Similarity=0.439 Sum_probs=283.5
Q ss_pred eeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||+++++++ ..+++.+.+.|.|.+++++||+.++++|+.|+..+.|..+.. ...|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK-PKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC-CCCCccCCcccceEEEEeCCCCCCCC
Confidence 7899999887 349999999999999999999999999999999888765432 24577899999999999999999999
Q ss_pred CCCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||+|+..+ ..+|+.|.+|..++.+.|.+... .|+... |+|++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~s~~~~~~~~~~~lp~ 137 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVD-------------------GTFAEYAIADARYVTPIPD 137 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccC-------------------CcceeEEEeccccEEECCC
Confidence 999999875 57899999999999999987543 333333 4799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++.+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++.+.++++|++.++
T Consensus 138 ~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~ 215 (341)
T cd08297 138 GLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFV 215 (341)
T ss_pred CCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998754 58999999999998 7799999999999999 999999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~ 330 (390)
++.+ .++.+.+.+++++ ++|++||+.+....+..++++++++ |+++.+|.... ...+++...+. ++.++.+..
T Consensus 216 ~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd08297 216 DFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSL 290 (341)
T ss_pred cCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEec
Confidence 8876 5788888888876 9999999887766689999999999 99999986542 22344444443 477887754
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
... .++++.++++++++++.+ .+ ..|+++++.+|++.+..+... |+++++
T Consensus 291 ~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 291 VGT---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred cCC---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 332 578899999999998764 35 679999999999999887765 999875
No 64
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=6.5e-40 Score=318.96 Aligned_cols=338 Identities=25% Similarity=0.377 Sum_probs=272.9
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC------CCCCCCCCcccccceeEEEEEeCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST------DLPKLPLPVIFGHEAVGVVESVGEY 89 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (390)
+.+.++..+ .+++.++|.|++++++++||+.++++|++|++.+.+.. +.. ..+|.++|||++|+|+++|++
T Consensus 29 ~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~ 105 (384)
T cd08265 29 LGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGL-TEFPVVIGHEFSGVVEKTGKN 105 (384)
T ss_pred ceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcc-cCCCcccccceEEEEEEECCC
Confidence 444555543 39999999999999999999999999999998876421 111 156889999999999999999
Q ss_pred CCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceE
Q 016363 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (390)
Q Consensus 90 v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~ 169 (390)
++.|++||+|++.+..+|+.|+.|..++.++|..+.. .|+..+ |+|++|+.++++.++
T Consensus 106 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~-------------------g~~~~~v~v~~~~~~ 163 (384)
T cd08265 106 VKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSAD-------------------GAFAEYIAVNARYAW 163 (384)
T ss_pred CCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCC-------------------CcceeeEEechHHeE
Confidence 9999999999999999999999999999999986542 233223 489999999999999
Q ss_pred EcCCCC-------CcchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHH
Q 016363 170 KITPHI-------PLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE 241 (390)
Q Consensus 170 ~~p~~~-------~~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 241 (390)
++|+++ ++. ++.++.++++||+++... .++++|++|||+|+|++|++++++|+.+|+.+|+++++++++.+
T Consensus 164 ~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~ 242 (384)
T cd08265 164 EINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRN 242 (384)
T ss_pred ECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 999864 444 556667899999988666 68999999999988999999999999999877999999999999
Q ss_pred HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccCh-HHHHHHHHHhccCCceEEEEcccCCCCCcccchHh
Q 016363 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE 319 (390)
Q Consensus 242 ~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~ 319 (390)
.++++|+++++++++....++.+.+.+++++ ++|+|+|++|+. ..+..++++++++ |+++.+|.... ..+++...
T Consensus 243 ~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~ 319 (384)
T cd08265 243 LAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEV 319 (384)
T ss_pred HHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHH
Confidence 9999999999887641123788889888887 999999999973 3478899999999 99999986533 22333333
Q ss_pred hh-cceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEE
Q 016363 320 IL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 384 (390)
Q Consensus 320 ~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl 384 (390)
+. +..++.++.... ....+.+++++++++.+++..++++.|+++++++|++.+.++...|+++
T Consensus 320 ~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 320 LQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred HhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 33 366777764322 1346889999999998887666778999999999999976665458775
No 65
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.8e-39 Score=310.29 Aligned_cols=334 Identities=27% Similarity=0.442 Sum_probs=282.6
Q ss_pred eeEEEeecCCCC-cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKP-LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~-~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++..++++ +.+.+.+.|.+++++|+|++.++++|+.|+....|..+.. ..+|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~-~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTL-TKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCccc-CCCCEeccccccEEEEEECCCCccCC
Confidence 789999999987 6778888888999999999999999999999988876522 15678999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|+..+..+|+.|.+|..++.+.|..... .|...+ |+|++|+.++.+.++++|++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~ 137 (338)
T cd08254 80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGID-------------------GGFAEYIVVPARALVPVPDG 137 (338)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccC-------------------CcceeeEEechHHeEECCCC
Confidence 99999999999999999999999999955322 233333 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++.+++.++.+++|||+++.....++++++|||.|+|.+|++++++|+..|+ +|+++++++++.+.++++|.+.+++.
T Consensus 138 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~ 216 (338)
T cd08254 138 VPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNS 216 (338)
T ss_pred CCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcC
Confidence 99999999999999999998778889999999998879999999999999999 89999999999999999999888877
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (390)
.+ ..+.+.+ +...+ ++|+++||+|....+..++++|+++ |+++.+|..... ..++...+.. +.++.++...
T Consensus 217 ~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~ 289 (338)
T cd08254 217 LD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDK--LTVDLSDLIARELRIIGSFGG 289 (338)
T ss_pred CC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCC--CccCHHHHhhCccEEEEeccC
Confidence 65 5566666 45555 8999999999776688999999999 999999865322 2333343443 7777776533
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
. .+.+..++++++++.+.+. + +.+++++++++++.+.+++.. |+|+++
T Consensus 290 ~---~~~~~~~~~ll~~~~l~~~--~-~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 T---PEDLPEVLDLIAKGKLDPQ--V-ETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred C---HHHHHHHHHHHHcCCCccc--c-eeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 2 5678899999999988754 4 789999999999999888766 999874
No 66
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.3e-39 Score=312.10 Aligned_cols=339 Identities=30% Similarity=0.450 Sum_probs=274.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||+++++.++..+++.+.+.|.|+++|++|||.++++|+.|+.++.+... ......|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 68999998886699999999999999999999999999999987654321 11114577899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++++.|..... .|... .|+|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDT-------------------DGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccce---EeccC-------------------CCcceEEEEechHHcEECcCC
Confidence 99999999999999999999999999975422 22222 258999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++++.+ .++..+.++++++. ...++|++|||.|+|.+|++++|+|+.+|+++|++++++++|.+.++++|++++++.
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998544 56667888888763 456899999998889999999999999998678899888999999999999988877
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
+. .++. .+.+++++ ++|++||++|+......++++|+++ |+++.+|.........+....+.++..+.+.....
T Consensus 216 ~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd05281 216 RE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK 290 (341)
T ss_pred cc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC
Confidence 65 5677 78888877 9999999999877688999999999 99999985543222222222344577777664221
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
..+.+.+++++++++.+++...+.+.++++++++|++.+.++...|+++++
T Consensus 291 --~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 291 --MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred --cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 235677899999999887766677889999999999999887733998864
No 67
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2.1e-39 Score=310.81 Aligned_cols=336 Identities=27% Similarity=0.472 Sum_probs=278.0
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++++++. +.+.+.++|+++++|++||+.++++|+.|+....+.. .. ..|.++|+|++|+|+.+|++++.|++
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~--~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AY--HPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CC--CCCcccCcceEEEEEEECCCCCcCCC
Confidence 68999999876 9999999999999999999999999999999887754 22 46788999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.+...|+.|.+|..+.+..|+.... +|.... |+|++|+.++.+.++++|+++
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lP~~~ 134 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRD-------------------GAFAEYVSVPARNLIKIPDHV 134 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcce---EecccC-------------------CcccceEEechHHeEECcCCC
Confidence 9999999989999999999999999976432 222222 589999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++++++.+ ..++|||+++ ....++++++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++|++.+++++
T Consensus 135 ~~~~aa~~-~~~~ta~~~l-~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~ 212 (343)
T cd08236 135 DYEEAAMI-EPAAVALHAV-RLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK 212 (343)
T ss_pred CHHHHHhc-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc
Confidence 99999887 5789999988 478899999999998899999999999999994499999999999999999999999877
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCccc-chH-hhhcceeEEeeecC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSI-EILKGRSVCGTYFG 332 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~-~~~~~~~i~g~~~~ 332 (390)
+ .. .+.+.+..++ ++|++|||+|....+..++++|+++ |+++.+|.......... ... .+.++.++.++...
T Consensus 213 ~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (343)
T cd08236 213 E---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNS 287 (343)
T ss_pred c---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeec
Confidence 6 45 6777777776 8999999998876689999999999 99999996543211111 111 23447888877653
Q ss_pred CCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhc-CCce-EEEE
Q 016363 333 GLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLE-GKSL-RCII 384 (390)
Q Consensus 333 ~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~-~~~~-kvvl 384 (390)
... ..+.+++++++++++++.+.+.+.+.+++++++++++.+.+ +... |+|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 288 YSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred cccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 221 24568889999999987644446689999999999999988 5554 8764
No 68
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.2e-39 Score=307.58 Aligned_cols=316 Identities=21% Similarity=0.346 Sum_probs=263.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++. +++.+.+.|+++++||+||+.++++|++|+....|..+ +|.++|+|++|+|+++|++ +++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC---CCC
Confidence 68999998764 99999999999999999999999999999999888642 5678999999999999987 789
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCC-CCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
||+|.+.+..+|+.|.+|..+.++.|.+... .++. .+ |+|++|+.++.+.++++|++
T Consensus 72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~ 129 (319)
T cd08242 72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD-------------------GAFAEYLTLPLENLHVVPDL 129 (319)
T ss_pred CCeEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC-------------------CceEEEEEechHHeEECcCC
Confidence 9999999999999999999999999876432 2221 12 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
+++++++.+ .++.++|. +.+..++++|++|||+|+|.+|++++|+|+.+|+ +|+++++++++.+.++++|++.++++
T Consensus 130 ~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~ 206 (319)
T cd08242 130 VPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPD 206 (319)
T ss_pred CCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCc
Confidence 999888764 34556665 4478899999999999889999999999999999 79999999999999999999888776
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeecC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFG 332 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 332 (390)
.+ . +++ ++|++|||+|+...+..++++++++ |+++..+.... ...++...+ .++.++.+...+
T Consensus 207 ~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 271 (319)
T cd08242 207 EA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG 271 (319)
T ss_pred cc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc
Confidence 44 1 233 8999999999876689999999999 99998764432 233333333 347788877533
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
.+++++++++++++++.+++++.|+++++++||+.+.++..+|+++++
T Consensus 272 ------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 272 ------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred ------cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 278899999999987666688999999999999999877656999864
No 69
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.6e-39 Score=308.89 Aligned_cols=310 Identities=23% Similarity=0.261 Sum_probs=261.8
Q ss_pred eeEEEeecCCCC---cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|||+++.+++.+ +++.++|.|.+.++||+|||.++++|+.|+..+.|..+.. ..+|.++|||++|+|+++|+++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~-~~~p~~~G~e~~G~V~~~G~~v~~ 79 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYK-PELPAIGGSEAVGVVDAVGEGVKG 79 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC-CCCCCCCCcceEEEEEEeCCCCCC
Confidence 689999888754 7889999999999999999999999999999998865422 156889999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
|++||+|++... .|+|++|+.++.+.++++|
T Consensus 80 ~~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip 110 (324)
T cd08292 80 LQVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLP 110 (324)
T ss_pred CCCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECC
Confidence 999999987531 1489999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++++++.+++.+.|||+++ +..++++|++|||+|+ |.+|++++|+|+.+|+ +|++++.++++.+.++++|++++
T Consensus 111 ~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (324)
T cd08292 111 DGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPV 188 (324)
T ss_pred CCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEE
Confidence 9999999999998899999987 6689999999999988 9999999999999999 89999999999999988999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 329 (390)
++..+ .++.+.+.+++++ ++|+|||++|+.. ...++++++++ |+++.+|... ....+++... +.++.++.++
T Consensus 189 ~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 262 (324)
T cd08292 189 VSTEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGF 262 (324)
T ss_pred EcCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEE
Confidence 88766 6788889999888 9999999999875 78999999999 9999998653 2233344332 3458888887
Q ss_pred ecCCCC-------chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 330 YFGGLK-------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 330 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
...... ..+.+..+++++.++++++. +.+.|+++++.+|++.+.+.... |++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 263 WGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred EcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 654321 13467889999999988754 46889999999999998876655 88763
No 70
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.4e-40 Score=308.46 Aligned_cols=269 Identities=20% Similarity=0.376 Sum_probs=222.9
Q ss_pred ccccceeEEEEEeCCCCC------cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCce
Q 016363 74 IFGHEAVGVVESVGEYVE------EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 147 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~------~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~ 147 (390)
++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|+.++++.|.+... .|....+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC----------
Confidence 579999999999999999 89999999999999999999999999999987543 12211000
Q ss_pred eeccccccccceeEEeeCC-ceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 016363 148 IHHFLNISSFTEYSVVDIT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR 226 (390)
Q Consensus 148 ~~~~~~~g~~a~~~~v~~~-~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g 226 (390)
.....|+|+||+.+|++ .++++|+++++++++.+++.+.|||+++ +.....+|++|||+|+|++|++++|+|+.+|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00012589999999997 7999999999999999999999999987 5566679999999999999999999999999
Q ss_pred CCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 227 ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 227 ~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+++|++++++++|.++++++|++.++++.+ ..+.+.+++.+ ++|++||++|....++.++++++++ |+++.+|
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G 218 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence 956999999999999999999999887643 34566677766 8999999999888789999999999 9999999
Q ss_pred ccCCCCCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHcC--CCCCccceeeeeccccH
Q 016363 306 VEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDI 367 (390)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~l~~~ 367 (390)
........++++..+.. ++++.|+..+. .++++++++++.++ ++++.++++++|+|+++
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 65432334556655554 89999986433 56899999999984 67777889999999874
No 71
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=4.4e-39 Score=308.04 Aligned_cols=333 Identities=23% Similarity=0.393 Sum_probs=265.9
Q ss_pred EeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccc-cCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCE
Q 016363 20 ICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL 98 (390)
Q Consensus 20 ~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~ 98 (390)
++++.+. +.+.+.++|+++++||+|||.++++|++|+...+ +.........|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4666766 9999999999999999999999999999988764 3221111135778999999999999999999999999
Q ss_pred EeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcc
Q 016363 99 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG 178 (390)
Q Consensus 99 V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~ 178 (390)
|++.+..+|++|.+|..|+.+.|.++.+ .+... +.....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~--------------~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAM--------------RFPHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecc--------------ccCCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999999999999987532 11100 000012589999999999999999999999
Q ss_pred hhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 179 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 179 ~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
+|+. ..++++||+++.....+ ++++|||.|+|.+|++++|+|+.+|+++|+++++++++.++++++|.++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 9876 56888999987555555 9999999888999999999999999867999999999999889999999998765
Q ss_pred CcCHHHHHHhhc-CC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeecCCCC
Q 016363 259 DKTVSQVIKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLK 335 (390)
Q Consensus 259 ~~~~~~~i~~~~-~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 335 (390)
.++ .++. .. ++|++||++|+...++..+++|+++ |+++.+|... .....+... +.+++++.+...
T Consensus 220 -~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~---- 287 (339)
T cd08232 220 -DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR---- 287 (339)
T ss_pred -hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec----
Confidence 332 2222 22 7999999999766688999999999 9999998543 223333333 334777777642
Q ss_pred chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 336 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
..+.+++++++++++++++...++++|+++++++|++.+.++... |+|+++
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 288 FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 245788999999999887766677999999999999999876655 999864
No 72
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=8.4e-39 Score=305.37 Aligned_cols=336 Identities=22% Similarity=0.340 Sum_probs=280.4
Q ss_pred eeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||++++..+. .+.+.+.+.|++.+++|+|++.++++|++|+..+.|..... ..+|.++|||++|+|+.+|++++.|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK-LPLPHILGSDGAGVVEAVGPGVTNV 79 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCC-CCCCeecccceEEEEEEeCCCCCCC
Confidence 68999985443 27888888888899999999999999999999888764322 2568899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+..+|+.|.+|.+++++.|..... .|.... |+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~-------------------g~~~~~~~~~~~~~~~~p~ 137 (342)
T cd08266 80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVD-------------------GGYAEYVAVPARNLLPIPD 137 (342)
T ss_pred CCCCEEEEccccccccchhhccccccccccccc---cccccC-------------------cceeEEEEechHHceeCCC
Confidence 999999999999999999999999999976422 233222 4799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++++.+||+++.+..++.++++++|+|+ +.+|++++++++..|+ +|+.+++++++.+.++.++.+.++
T Consensus 138 ~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~ 216 (342)
T cd08266 138 NLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVI 216 (342)
T ss_pred CCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEE
Confidence 99999999999999999999888899999999999998 7999999999999999 899999999999999888887777
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-HhhhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 330 (390)
+..+ .++.+.+.+.+.+ ++|++++++|... +...+++++++ |+++.+|..... ...++. ..+.++.++.+..
T Consensus 217 ~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 290 (342)
T cd08266 217 DYRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGST 290 (342)
T ss_pred ecCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEe
Confidence 6654 5677777777766 8999999999865 88999999999 999999865432 223333 2345588888775
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
... ...+.+++++++++.+.+ .+++.|+++++++|++.+.++... |+++++
T Consensus 291 ~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 291 MGT---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cCC---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 443 457888999999997654 367899999999999999877665 988763
No 73
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.1e-38 Score=303.98 Aligned_cols=329 Identities=33% Similarity=0.499 Sum_probs=274.1
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++..+++++.+.+.|.|.+.+++|+|+++++++|+.|++...|..+.. ..|.++|+|++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG--KYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC--CCCeeccccceEEEEEECCCCccCCC
Confidence 6899998865669999999999999999999999999999999988866544 57889999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++....+|+.|++|..+..+.|.+. . ..|.... |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~ 136 (332)
T cd08259 79 GDRVILYYYIPCGKCEYCLSGEENLCRNR-A--EYGEEVD-------------------GGFAEYVKVPERSLVKLPDNV 136 (332)
T ss_pred CCEEEECCCCCCcCChhhhCCCcccCCCc-c--ccccccC-------------------CeeeeEEEechhheEECCCCC
Confidence 99999999899999999999999999864 1 1333222 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
++++++.+++++.|||+++.. ..+++++++||+|+ |.+|++++++++..|+ +|+++++++++.+.+++++.+.+++.
T Consensus 137 ~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 214 (332)
T cd08259 137 SDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDG 214 (332)
T ss_pred CHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999998865 88999999999998 9999999999999999 89999999999999988898777754
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 333 (390)
. ++.+.+.+.. ++|++++++|... ...++++++++ |+++.+|....... .+... ...++..+.++..
T Consensus 215 ~-----~~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-- 282 (332)
T cd08259 215 S-----KFSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDPA-PLRPGLLILKEIRIIGSIS-- 282 (332)
T ss_pred H-----HHHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCCc-CCCHHHHHhCCcEEEEecC--
Confidence 2 2555565543 7999999999877 88899999999 99999986432211 11222 2234666666532
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
...+++++++++++++.+.+ .+++.|+++++++|++.+.++... |++++
T Consensus 283 -~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 283 -ATKADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred -CCHHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 23577889999999997654 367899999999999999887765 88764
No 74
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.8e-39 Score=309.36 Aligned_cols=311 Identities=21% Similarity=0.236 Sum_probs=249.0
Q ss_pred eeEEEeecCCC-CcEEEEeec----CCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccce--eEEEEEeCC
Q 016363 16 CKAAICRIPGK-PLVIEEIEV----EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA--VGVVESVGE 88 (390)
Q Consensus 16 ~~a~~~~~~~~-~~~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~vG~ 88 (390)
+|++....+.. .|++.+.++ |+|++|||||||++++||+.|++.+.|..... ...|.++|+++ .|++..+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~-~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSL-YLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccc-cCCCcCCCCeEeccEEEEEEec
Confidence 45555444432 389999988 77999999999999999999999988854321 14678889754 456666888
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC-Cc
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-TH 167 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~ 167 (390)
.++.|++||+|++. |+|+||++++. +.
T Consensus 87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~ 114 (338)
T cd08295 87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD 114 (338)
T ss_pred CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence 88899999999753 37999999999 79
Q ss_pred eEEcC-CCCCcc-hhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 168 VVKIT-PHIPLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 168 v~~~p-~~~~~~-~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
++++| +++++. +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK 193 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99995 678887 788999999999999888899999999999998 9999999999999999 8999999999999999
Q ss_pred h-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCc----ccchHh
Q 016363 245 K-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI----SLNSIE 319 (390)
Q Consensus 245 ~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~ 319 (390)
+ +|+++++++.+ +.++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|........ ..+...
T Consensus 194 ~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~ 269 (338)
T cd08295 194 NKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLN 269 (338)
T ss_pred HhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHH
Confidence 8 99999998653 136888888877569999999999855 89999999999 999999864322110 112222
Q ss_pred -hhcceeEEeeecCCCCc--hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 320 -ILKGRSVCGTYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 320 -~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+.+++++.++....... .+.++++++++.++++++. +...|+++++.+|++.+.++... |+++++
T Consensus 270 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 270 IIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 33477788765443321 3457889999999988765 44679999999999999887765 999864
No 75
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.4e-38 Score=303.93 Aligned_cols=330 Identities=26% Similarity=0.476 Sum_probs=276.6
Q ss_pred eeEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCC
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~v 95 (390)
|||+++.+++. +.+.+.+.|++.++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+.+|+++++|++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCCCCCC
Confidence 68999998885 999999999999999999999999999999988886542 37789999999999999999999999
Q ss_pred CCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 96 Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
||+|++.....|+.|.+|..++.++|..... .|.... |+|++|+.++.+.++++|+++
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~ 134 (334)
T cd08234 77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRN-------------------GGFAEYVVVPAKQVYKIPDNL 134 (334)
T ss_pred CCEEEEcCCcCCCCCccccCcChhhCCCcce---eccCCC-------------------CcceeEEEecHHHcEECcCCC
Confidence 9999998888999999999999999977532 222222 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++.+++.+ ..+.++++++ ..+++++|++|||+|+|.+|++++++|+..|+++|+++++++++.+.++++|++.+++.+
T Consensus 135 ~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (334)
T cd08234 135 SFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS 212 (334)
T ss_pred CHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC
Confidence 99998876 6788999987 888999999999998899999999999999994489999999999999999988888776
Q ss_pred CCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCC
Q 016363 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG 333 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 333 (390)
. .++... +.+.+ ++|++||++|.......++++++++ |+++.+|........++.+..+. ++.++.+....
T Consensus 213 ~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 285 (334)
T cd08234 213 R---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN- 285 (334)
T ss_pred C---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-
Confidence 5 445444 33444 8999999998766688999999999 99999986543333445554444 47777776432
Q ss_pred CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 334 LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
.+.+++++++++++++.+...++++|+++++++|++.+.+ ... |+++
T Consensus 286 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 286 ---PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred ---HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 3568889999999988776656789999999999999988 444 8876
No 76
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=4.8e-39 Score=306.00 Aligned_cols=320 Identities=25% Similarity=0.358 Sum_probs=262.1
Q ss_pred eeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++.+++ ..+++.+.+.|+++++||+||+.++++|++|+..+.+. ... .+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~--~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVK--PMPHIPGAEFAGVVEEVGDHVKGVK 77 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCC--CCCeecccceeEEEEEECCCCCCCC
Confidence 6889988776 34888888888899999999999999999999887642 222 3577899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.+..+|+.|.+|..++++.|.+... +|.... |+|++|+.++.+.++++|++
T Consensus 78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~ 135 (325)
T cd08264 78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSN-------------------GGYAEYIVVPEKNLFKIPDS 135 (325)
T ss_pred CCCEEEECCCcCCCCChhhcCCCccccCccce---eeccCC-------------------CceeeEEEcCHHHceeCCCC
Confidence 99999999989999999999999999987442 233222 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+++++++.+++.+.+||+++. ..++++|++|+|+|+ |++|++++++|+.+|+ +|+++++ .+.++++|++++++
T Consensus 136 ~~~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~ 209 (325)
T cd08264 136 ISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVD 209 (325)
T ss_pred CCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeec
Confidence 999999999999999999874 589999999999998 9999999999999999 8888863 36777899988887
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecC
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (390)
.++ +.+.+.+++ +++|+|+|++|... +..++++++++ |+++.+|... .....++...+.. +.++.++..+
T Consensus 210 ~~~-----~~~~l~~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 280 (325)
T cd08264 210 YDE-----VEEKVKEIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGG 280 (325)
T ss_pred chH-----HHHHHHHHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCC
Confidence 643 355666666 68999999999854 89999999999 9999998642 2223444444444 6777776544
Q ss_pred CCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EE
Q 016363 333 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RC 382 (390)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kv 382 (390)
. +++++++++++.+.+ + .+++.|+++++++|++.+.++... |+
T Consensus 281 ~---~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 281 T---RKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred C---HHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 3 578889999996443 2 356899999999999998876544 43
No 77
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.4e-38 Score=303.20 Aligned_cols=334 Identities=28% Similarity=0.444 Sum_probs=271.5
Q ss_pred ecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCCCcccccceeEEEEEeCCCCCcCCCCCEEe
Q 016363 22 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 100 (390)
Q Consensus 22 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~ 100 (390)
++++.++++.+.|.|+|+++|++||+.++++|+.|+.++.+.... ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 567777999999999999999999999999999999876554211 1114577899999999999999999999999999
Q ss_pred eecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchh
Q 016363 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180 (390)
Q Consensus 101 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~a 180 (390)
+.+...|+.|..|..+..+.|.+.+. +|+... |+|++|+.++++.++++|++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------------GCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---EeecCC-------------------CcceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999988543 222222 48999999999999999999998654
Q ss_pred hccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCc
Q 016363 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
+++.++.+|++++ ....++|++|+|.|+|++|++++|+|+.+|++.|+++++++++.+.++++|++.+++... .
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~ 216 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---E 216 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---c
Confidence 5677888998875 455789999999888999999999999999944889988899999999999988888766 6
Q ss_pred CHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCCchhh
Q 016363 261 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD 339 (390)
Q Consensus 261 ~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 339 (390)
++.+.+.+++++ ++|++|||+|+...+...+++|+++ |+++.+|........++....+.++.++.+... ....+.
T Consensus 217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 293 (340)
T TIGR00692 217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFET 293 (340)
T ss_pred CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhh
Confidence 788888888776 9999999999877688999999999 999999865322222222223344667766542 112356
Q ss_pred HHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCceEEEEec
Q 016363 340 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 386 (390)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~kvvl~~ 386 (390)
+.+++++++++++++.+++.+.++++++.++++.+.++...|+++++
T Consensus 294 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 294 WYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 78899999999887655577999999999999998877656998864
No 78
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.9e-38 Score=301.07 Aligned_cols=323 Identities=24% Similarity=0.357 Sum_probs=269.2
Q ss_pred eeEEEeecCCC----CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 16 CKAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 16 ~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
||++++.++++ ++.+.+.+.|.++++||+||+.++++|++|++.+.|..+.. .+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~ 78 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPP--KLPLIPGHEIVGRVEAVGPGVT 78 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCC--CCCccccccccEEEEEECCCCC
Confidence 68999998884 58888888888999999999999999999999988876544 5788999999999999999999
Q ss_pred cCCCCCEEeeec-ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 92 EVKERDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 92 ~~~vGd~V~~~~-~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+|++||+|+..+ ..+|++|.+|..++.++|+...+ .|+..+ |+|++|+.++.+.+++
T Consensus 79 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~ 136 (329)
T cd08298 79 RFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVD-------------------GGYAEYMVADERFAYP 136 (329)
T ss_pred CCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccC-------------------CceEEEEEecchhEEE
Confidence 999999997654 45899999999999999987654 233323 4799999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+|+++++.+++.+++++.|||+++ +.++++++++|||+|+|++|++++++++..|+ +|+++++++++.+.++++|++.
T Consensus 137 lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 214 (329)
T cd08298 137 IPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADW 214 (329)
T ss_pred CCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcE
Confidence 999999999999999999999988 88999999999999889999999999999999 9999999999999999999988
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (390)
+++... . ..+++|+++++.+....++.++++++++ |+++.+|.... ....++...+..+..+.+..
T Consensus 215 ~~~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~ 280 (329)
T cd08298 215 AGDSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVA 280 (329)
T ss_pred EeccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEec
Confidence 877654 1 1237999999877666789999999999 99999885321 11222233334466666664
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
.. ..+.+..++++++++.+++ . .+.|+++++++|++.+.++... |+++
T Consensus 281 ~~---~~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 281 NL---TRQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred CC---CHHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 32 2467888999999998765 2 4889999999999999887765 7763
No 79
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.4e-38 Score=303.65 Aligned_cols=299 Identities=19% Similarity=0.213 Sum_probs=235.4
Q ss_pred cEEEEeecCCCC-CCeEEEEEeeeecccccccccc---cCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeec
Q 016363 28 LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 103 (390)
Q Consensus 28 ~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~---g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~ 103 (390)
+++.+.+.|+|. +|||||||.++|||+.|..... +..... .+|.++|||++|+|+++|+++++|++||+|++..
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLA--PWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCC--CccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence 888999999874 9999999999999999864332 111112 4678999999999999999999999999997531
Q ss_pred ccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcch----
Q 016363 104 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI---- 179 (390)
Q Consensus 104 ~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~---- 179 (390)
++|+||++++++.++++|+++++.+
T Consensus 101 ---------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~ 129 (345)
T cd08293 101 ---------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYF 129 (345)
T ss_pred ---------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHH
Confidence 2699999999999999999865433
Q ss_pred hhccccchhhHHHHHHHHhCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCC
Q 016363 180 ACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPA 255 (390)
Q Consensus 180 aa~~~~~~~tA~~~l~~~~~~~~g--~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~ 255 (390)
+++++++++|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|+++|+++++++++.+.+++ +|+++++++.
T Consensus 130 ~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~ 209 (345)
T cd08293 130 LGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK 209 (345)
T ss_pred hhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC
Confidence 456777899999998778888877 99999998 9999999999999998679999999999999876 9999999887
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-CCcc----cc--hHhhhc--ceeE
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPIS----LN--SIEILK--GRSV 326 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~----~~--~~~~~~--~~~i 326 (390)
+ .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... .... +. ...+.. ++.+
T Consensus 210 ~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (345)
T cd08293 210 T---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITR 284 (345)
T ss_pred C---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEE
Confidence 6 67888898887669999999999876 78999999999 999999853211 1111 11 111222 3333
Q ss_pred EeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 327 CGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 327 ~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+....... ..+.+++++++++++++++. +...++++++++|++.+.+++.. |+++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 285 ERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 333221211 13457788899999988765 44567999999999999888765 999874
No 80
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=9.3e-39 Score=280.96 Aligned_cols=324 Identities=24% Similarity=0.321 Sum_probs=266.8
Q ss_pred CCCCCCCccceeeEEEeecCCCC---cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeE
Q 016363 5 SASPKAGKVIRCKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVG 81 (390)
Q Consensus 5 ~~~~~~~~~~t~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G 81 (390)
+.++..-+|...|++++.+.|+| +++.++++|....++|+||.+|+.|||+|+..++|.++..+ ++|.+=|+|++|
T Consensus 9 ~~ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP-~~PAVgGnEGv~ 87 (354)
T KOG0025|consen 9 SSSSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRP-ELPAVGGNEGVG 87 (354)
T ss_pred ecccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCC-CCCcccCCcceE
Confidence 45566778999999999999987 88899999987777799999999999999999999998874 889999999999
Q ss_pred EEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeE
Q 016363 82 VVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161 (390)
Q Consensus 82 ~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~ 161 (390)
+|+.+|+++++|++||+|+.... +.|+|++|.
T Consensus 88 eVv~vGs~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~ 119 (354)
T KOG0025|consen 88 EVVAVGSNVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEA 119 (354)
T ss_pred EEEEecCCcCccCCCCeEeecCC------------------------------------------------CCccceeeE
Confidence 99999999999999999986532 236999999
Q ss_pred EeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 162 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 162 ~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
+.+++.++++++.++++.||++.++.+|||.+|.+.-++.+||+|+--|+ +++|++.+|+|+++|+ +-|-+.|+...+
T Consensus 120 v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~i 198 (354)
T KOG0025|consen 120 VFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNI 198 (354)
T ss_pred eecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccH
Confidence 99999999999999999999999999999999999999999999888899 9999999999999999 888888888776
Q ss_pred HHH----HhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCccc
Q 016363 241 EIG----KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL 315 (390)
Q Consensus 241 ~~~----~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 315 (390)
+.+ +.+|+++|+...+..+.+..... ... .+...|+|+|+.. ...+.+.|.++ |..+.+|..+.. ..++
T Consensus 199 eel~~~Lk~lGA~~ViTeeel~~~~~~k~~---~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMSkq-Pv~~ 272 (354)
T KOG0025|consen 199 EELKKQLKSLGATEVITEEELRDRKMKKFK---GDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMSKQ-PVTV 272 (354)
T ss_pred HHHHHHHHHcCCceEecHHHhcchhhhhhh---ccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCccCC-Cccc
Confidence 655 45899999976553333322221 122 7899999999998 67788999998 999999966533 3344
Q ss_pred ch-HhhhcceeEEeeecCCCCch--------hhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEE
Q 016363 316 NS-IEILKGRSVCGTYFGGLKPR--------SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCII 384 (390)
Q Consensus 316 ~~-~~~~~~~~i~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl 384 (390)
+. ..++++++++|+++..+... +.+.++.++++.|++... -+...+|++...|++...+.-. .|-++
T Consensus 273 ~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i 350 (354)
T KOG0025|consen 273 PTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQII 350 (354)
T ss_pred ccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEE
Confidence 33 34677999999998877632 456788999999987754 3456789998888887654332 35555
Q ss_pred ec
Q 016363 385 WM 386 (390)
Q Consensus 385 ~~ 386 (390)
.+
T Consensus 351 ~~ 352 (354)
T KOG0025|consen 351 VL 352 (354)
T ss_pred Ee
Confidence 44
No 81
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=3e-38 Score=300.85 Aligned_cols=304 Identities=20% Similarity=0.239 Sum_probs=245.9
Q ss_pred eeeEEEeecC--CCC----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCC
Q 016363 15 RCKAAICRIP--GKP----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 15 t~~a~~~~~~--~~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (390)
.||++++.+. +.+ +++.+.+.|+|++|||+|||.+++||+.|...... .. .+|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~--~~p~v~G~e~~G~V~~--- 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LN--EGDTMIGTQVAKVIES--- 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CC--CCCcEecceEEEEEec---
Confidence 4889999983 332 88999999999999999999999999987652211 11 4688999999999995
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT-- 166 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-- 166 (390)
.++.|++||+|++. ++|++|+.++.+
T Consensus 74 ~~~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~ 101 (329)
T cd08294 74 KNSKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQ 101 (329)
T ss_pred CCCCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccc
Confidence 44679999999753 268999999999
Q ss_pred -ceEEcCCCCC--c---chhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 167 -HVVKITPHIP--L---GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 167 -~v~~~p~~~~--~---~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
.++++|++++ + ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus 102 ~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~ 180 (329)
T cd08294 102 PDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDK 180 (329)
T ss_pred cceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHH
Confidence 9999999998 2 2234678899999999888899999999999997 9999999999999999 89999999999
Q ss_pred HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC--c---c
Q 016363 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP--I---S 314 (390)
Q Consensus 240 ~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~---~ 314 (390)
.++++++|+++++++.+ .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|....... . .
T Consensus 181 ~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~ 255 (329)
T cd08294 181 VAWLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGP 255 (329)
T ss_pred HHHHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCc
Confidence 99999999999999876 68888888877668999999999855 89999999999 99999985322111 0 1
Q ss_pred -cchHhhhcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 315 -LNSIEILKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 315 -~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+....+.+++++.++...... ..+.+++++++++++++++. ...+|+++++++|++.+.+++.. |+++++
T Consensus 256 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 256 YVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred ccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 112223447788887544321 13457788999999988765 33579999999999999888765 999864
No 82
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=3.2e-38 Score=300.45 Aligned_cols=291 Identities=22% Similarity=0.277 Sum_probs=237.2
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCC
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~ 107 (390)
|++.+.+.|+|++|||||||.++++|+.|.. |..... ..|.++|.|++|+|+++|+ +|++||+|++.
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~--~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK--EGDTMMGQQVARVVESKNV---ALPKGTIVLAS----- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC--CCCcEecceEEEEEEeCCC---CCCCCCEEEEe-----
Confidence 8889999999999999999999999996543 332222 3578999999999999874 59999999863
Q ss_pred CCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc----CCCCCcchh-hc
Q 016363 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI----TPHIPLGIA-CL 182 (390)
Q Consensus 108 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~----p~~~~~~~a-a~ 182 (390)
++|++|+.++.+.+.++ |++++++++ ++
T Consensus 86 -----------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~ 118 (325)
T TIGR02825 86 -----------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGT 118 (325)
T ss_pred -----------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHh
Confidence 25899999999988887 899999997 67
Q ss_pred cccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcC
Q 016363 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 261 (390)
Q Consensus 183 ~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 261 (390)
++++++|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++++ ..+
T Consensus 119 l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~ 195 (325)
T TIGR02825 119 VGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKS 195 (325)
T ss_pred cccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--ccc
Confidence 89999999999888899999999999997 9999999999999999 8999999999999999999999998765 125
Q ss_pred HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCC---Cccc--chH-hhhcceeEEeeecCCCC
Q 016363 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---PISL--NSI-EILKGRSVCGTYFGGLK 335 (390)
Q Consensus 262 ~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~~~~--~~~-~~~~~~~i~g~~~~~~~ 335 (390)
+.+.++..+++++|++||++|+.. ...++++++++ |+++.+|...... ..+. ... .+.+++++.++....+.
T Consensus 196 ~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 273 (325)
T TIGR02825 196 LEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQ 273 (325)
T ss_pred HHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhh
Confidence 666666665558999999999876 79999999999 9999998643211 1111 122 23347778777543321
Q ss_pred ---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 336 ---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 336 ---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
..+.++++++++++|++++. +...|+++++.+|++.+.+++.. |+|++
T Consensus 274 ~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 274 GEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred hhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 13568889999999988765 44679999999999999888765 98864
No 83
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=8.6e-38 Score=297.97 Aligned_cols=327 Identities=28% Similarity=0.442 Sum_probs=270.7
Q ss_pred eEEEeecCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCC
Q 016363 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (390)
Q Consensus 17 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 96 (390)
||+++.+++..+++.+.|.|.+.+++++|++.++++|+.|+..+.|..... .+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~~g~~~~~~~~G 78 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGS--KYPLVPGHEIVGEVVEVGAGVEGRKVG 78 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCC--CCCcccCccceEEEEEECCCCcccccC
Confidence 688999997669999999999999999999999999999999988866443 578899999999999999999999999
Q ss_pred CEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC
Q 016363 97 DLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (390)
Q Consensus 97 d~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~ 175 (390)
|+|+..+. .+|++|.+|.++..+.|.+..+ +++... |+|++|+.++.+.++++|+++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~~ 136 (330)
T cd08245 79 DRVGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQ-------------------GGYAEYMVADAEYTVLLPDGL 136 (330)
T ss_pred CEEEEccccCCCCCChhhhCcCcccCcCccc---cCcccC-------------------CccccEEEEcHHHeEECCCCC
Confidence 99987543 6799999999999999988543 233222 489999999999999999999
Q ss_pred CcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCC
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~ 255 (390)
++.+++.+++.+.|||+++. ..+++++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 137 ~~~~~~~l~~~~~ta~~~l~-~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 214 (330)
T cd08245 137 PLAQAAPLLCAGITVYSALR-DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG 214 (330)
T ss_pred CHHHhhhhhhhHHHHHHHHH-hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC
Confidence 99999999999999999884 4889999999999888899999999999999 899999999999999999998888765
Q ss_pred CCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCCC
Q 016363 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGL 334 (390)
Q Consensus 256 ~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~ 334 (390)
. ...... ..+++|++||+++.......++++++++ |+++.+|..... ...+....+. ++.++.++..+.
T Consensus 215 ~---~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 284 (330)
T cd08245 215 A---ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG- 284 (330)
T ss_pred C---cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC-
Confidence 4 233222 2247999999988777689999999999 999999864322 2222223333 377787776543
Q ss_pred CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 335 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
...++.+++++.++.+.+ .+ +.|+++++++|++.+.++... |+++
T Consensus 285 --~~~~~~~~~ll~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 285 --RADLQEALDFAAEGKVKP--MI-ETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred --HHHHHHHHHHHHcCCCcc--eE-EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 467888999999998764 24 789999999999999877765 7664
No 84
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.8e-38 Score=301.03 Aligned_cols=325 Identities=22% Similarity=0.274 Sum_probs=260.8
Q ss_pred eeEEEeecCCCC--cEEEE-eecCCCCCCeEEEEEeeeecccccccccccCCCC------------------CCCCCCcc
Q 016363 16 CKAAICRIPGKP--LVIEE-IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------------------PKLPLPVI 74 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~------------------~~~~~p~~ 74 (390)
||++++.+++.+ +.+.+ .+.|++.+++|+|||.++++|++|+..+.|..+. ...++|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888877643 55544 4677789999999999999999999988775421 01257899
Q ss_pred cccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccc
Q 016363 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNI 154 (390)
Q Consensus 75 ~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~ 154 (390)
+|||++|+|+++|+++++|++||+|++.+..+|+.|..|.. |.. .|...+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~------~~~~~~------------------- 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY------IGSERD------------------- 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc------cCCCCC-------------------
Confidence 99999999999999999999999999988888888776432 211 111112
Q ss_pred cccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 155 SSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 155 g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
|+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ...++++|++|||+|+ |++|++++++|+.+|+ +|+++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 4899999999999999999999999999999999999987 7889999999999998 9999999999999999 78888
Q ss_pred cCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC
Q 016363 234 DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312 (390)
Q Consensus 234 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~ 312 (390)
+++. +.+.++++|++.+++..+ ..+.+ .+.+.+ ++|++||++|+.. +..++++++++ |+++.+|.... ..
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~ 279 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAIAG-PV 279 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEecccCC-cc
Confidence 8665 888889999876665543 33333 445555 8999999999865 89999999999 99999985532 22
Q ss_pred cccchHh-hhcceeEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 313 ISLNSIE-ILKGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 313 ~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+++... +.++.++.++.... .+.+.++++++.++++++ .+.+.|+++++++|++.+.++... |+++.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 280 VELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred ccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 3455554 34488888876543 567899999999998764 366899999999999999877665 988764
No 85
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.5e-36 Score=288.29 Aligned_cols=314 Identities=18% Similarity=0.210 Sum_probs=259.3
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|||+++++++.+ +++.+.+.|.+.+++|+|++.++++|+.|+..+.|..+.. ...+|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999886653 6777777777899999999999999999999887754321 1256789999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|++... .. .|+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~~-------------------~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG----------------------------RA-------------------GGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC----------------------------CC-------------------CceeeEEEEEchHHeEeCC
Confidence 999999987531 00 1589999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++.+++.+++.+.||| ++.+..+++++++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 5668889999999999997 9999999999999999 89999999999999999999888
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 329 (390)
++..+ .++.+.+.+++++ ++|+++|++|+.. ...++++++++ |+++.+|...... ..++... +.++.++.+.
T Consensus 192 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08244 192 VDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGL 265 (324)
T ss_pred EecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEe
Confidence 88766 6788888888777 8999999999887 78899999999 9999998654332 2444333 4448888877
Q ss_pred ecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 330 YFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 330 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
....... .+.+.+++++++++++.. .+++.|+++++.+|++.+.++... |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 266 LGVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 6543321 356777889999997754 366899999999999999887765 998864
No 86
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.1e-36 Score=287.36 Aligned_cols=300 Identities=28% Similarity=0.449 Sum_probs=251.4
Q ss_pred eeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||++++++++ ..+++++++.|++.+++|+|||.++++|+.|++...+..... ..|.++|+|++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPV--ETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcC--CCCeeeccceEEEEEEECCCcCcCC
Confidence 5788888765 349999999999999999999999999999999888765333 4678999999999999999999999
Q ss_pred CCCEEeeecc-cCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 95 ERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 95 vGd~V~~~~~-~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
+||+|++.+. .+|+.|++|..+.++.|..... +|.... |+|++|+.++.+.++++|+
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~lp~ 136 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQAD-------------------GGFAEYVLVPEESLHELPE 136 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCC-------------------CceEEEEEcchHHeEECcC
Confidence 9999999775 6899999999999999976421 222222 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec--CChhhHHHHHhcCCcEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDF 251 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~~g~~~v 251 (390)
++++++++ ++..+++||+++....+++++++|||.|+|.+|++++|+|+.+|+ +|+++. +++++.+.++++|++++
T Consensus 137 ~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~ 214 (306)
T cd08258 137 NLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV 214 (306)
T ss_pred CCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc
Confidence 99999887 667889999998888999999999998779999999999999999 787763 34557888889999887
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 329 (390)
++.. .++.+.+.++.++ ++|++||++|+...+...+++|+++ |+++.+|.... ....++...+ .+++++.|+
T Consensus 215 -~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~ 288 (306)
T cd08258 215 -NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGS 288 (306)
T ss_pred -CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEE
Confidence 7665 7888888888776 8999999998766688999999999 99999997652 2244444444 459999999
Q ss_pred ecCCCCchhhHHHHHHHHHcC
Q 016363 330 YFGGLKPRSDIATLAQKYLDK 350 (390)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~ 350 (390)
..+. .++++++++++++|
T Consensus 289 ~~~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 289 RSST---PASWETALRLLASG 306 (306)
T ss_pred ecCc---hHhHHHHHHHHhcC
Confidence 8765 57899999999875
No 87
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=7.3e-37 Score=291.20 Aligned_cols=314 Identities=19% Similarity=0.190 Sum_probs=256.8
Q ss_pred eeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
+||++++.+++.+ |++.+++.|.|+++||+||+.++++|++|+....|..+.. .+|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~vG~~v~~ 78 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP--SLPSGLGTEAAGVVSKVGSGVKH 78 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC--CCCCccCcceEEEEEEeCCCCCC
Confidence 6899999988764 8888999999999999999999999999999888866544 56889999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|+.... ..|+|++|+.++.+.++++|
T Consensus 79 ~~~Gd~V~~~~~------------------------------------------------~~g~~~~~v~v~~~~~~~lp 110 (327)
T PRK10754 79 IKVGDRVVYAQS------------------------------------------------ALGAYSSVHNVPADKAAILP 110 (327)
T ss_pred CCCCCEEEECCC------------------------------------------------CCcceeeEEEcCHHHceeCC
Confidence 999999974210 01479999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++++++.+++.+++||.++.....+++|++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++++
T Consensus 111 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~ 189 (327)
T PRK10754 111 DAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQV 189 (327)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEE
Confidence 999999999988899999998877889999999999986 9999999999999999 89999999999999999999999
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-ce-----
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR----- 324 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~----- 324 (390)
++.+. .++.+.+++++++ ++|++|||+++.. ....+++++++ |+++.+|..... ...+....+.+ +.
T Consensus 190 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (327)
T PRK10754 190 INYRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTR 263 (327)
T ss_pred EcCCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEec
Confidence 88766 6788888888887 9999999999865 88899999999 999999865321 11222222222 11
Q ss_pred -eEEeeecCCC-CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 325 -SVCGTYFGGL-KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 325 -~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+.+.. ... ...+.+..++++++++++++.....+.|+++++.+|++.+.++... |+++.+
T Consensus 264 ~~~~~~~-~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 264 PSLQGYI-TTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred ceeeccc-CCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 111111 110 0112355688999999888655556899999999999999887765 999863
No 88
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.3e-36 Score=286.43 Aligned_cols=330 Identities=23% Similarity=0.301 Sum_probs=269.9
Q ss_pred eeEEEeecCC--CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPG--KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||++++..+ ..+++.+.+.|.++++|++|++.++++|++|+....|..+.. ..+|.++|||++|+|+++|+.++.|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP-VKDPLIPLSDGAGEVVAVGEGVTRF 79 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC-CCCCcccccceeEEEEEeCCCCcCC
Confidence 7899999764 338888888888899999999999999999999888765433 1478899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.....|+.|.+| .|....+ .|...+ |+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~------~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~ 131 (336)
T cd08276 80 KVGDRVVPTFFPNWLDGPPT------AEDEASA---LGGPID-------------------GVLAEYVVLPEEGLVRAPD 131 (336)
T ss_pred CCCCEEEEeccccccccccc------ccccccc---cccccC-------------------ceeeeEEEecHHHeEECCC
Confidence 99999999877666554443 3322111 222222 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
++++.+++.+++.+.+||+++.....+++|++|+|+|+|++|++++++++.+|+ +|+++++++++.+.++++|.+.+++
T Consensus 132 ~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 210 (336)
T cd08276 132 HLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVIN 210 (336)
T ss_pred CCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEc
Confidence 999999999999999999998788899999999999889999999999999999 8999999999999999999998887
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 331 (390)
... ..++.+.+.+++++ ++|++||+++... ...++++++++ |+++.+|....... ...... +.++.++.+...
T Consensus 211 ~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~ 285 (336)
T cd08276 211 YRT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGFEA-PVLLLPLLTKGATLRGIAV 285 (336)
T ss_pred CCc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCCcc-CcCHHHHhhcceEEEEEec
Confidence 643 24677888888887 9999999998665 88999999999 99999996543322 222233 455888888875
Q ss_pred CCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 332 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+. .+.+.+++++++++.+.+. ..+.|++++++++++.+.++... |++++
T Consensus 286 ~~---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 286 GS---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred Cc---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 54 4678889999998876643 45889999999999999877665 88875
No 89
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=1.1e-36 Score=291.11 Aligned_cols=308 Identities=18% Similarity=0.204 Sum_probs=246.7
Q ss_pred eEEEeecC---CCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC
Q 016363 17 KAAICRIP---GKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (390)
Q Consensus 17 ~a~~~~~~---~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (390)
||+++.++ +++ ++..++|.|+|+++||+|||+++++|+.|+..+.+..+.. .+|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~ 78 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA--GQPKILGWDAAGVVVAVGDEVT 78 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC--CCCcccceeeEEEEEEeCCCCC
Confidence 56777776 443 7888889999999999999999999999999887765433 5788999999999999999999
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
.|++||+|+.... .. ..|+|++|+.++.+.++++
T Consensus 79 ~~~~Gd~V~~~~~---------------------------~~-------------------~~g~~~~~~~v~~~~~~~i 112 (336)
T TIGR02817 79 LFKPGDEVWYAGD---------------------------ID-------------------RPGSNAEFHLVDERIVGHK 112 (336)
T ss_pred CCCCCCEEEEcCC---------------------------CC-------------------CCCcccceEEEcHHHcccC
Confidence 9999999986320 00 1158999999999999999
Q ss_pred CCCCCcchhhccccchhhHHHHHHHHhCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHH
Q 016363 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 172 p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~ 244 (390)
|+++++++++.+++++.|||+++....++++ |++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++
T Consensus 113 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~ 191 (336)
T TIGR02817 113 PKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVL 191 (336)
T ss_pred CCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHH
Confidence 9999999999999999999999888888887 999999997 99999999999998 99 9999999999999999
Q ss_pred hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc-c
Q 016363 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-G 323 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~ 323 (390)
++|+++++++.. ++.+.+.++.++++|+|+|++++.......+++++++ |+++.++.. . .++...+.. +
T Consensus 192 ~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~--~~~~~~~~~~~ 261 (336)
T TIGR02817 192 ELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---A--ELDISPFKRKS 261 (336)
T ss_pred HcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---c--cccchhhhhcc
Confidence 999999997644 5777787754448999999987666688999999999 999988522 1 222222332 4
Q ss_pred eeEEeeecCC--CCc-------hhhHHHHHHHHHcCCCCCccceeeee---ccccHHHHHHHHhcCCce-EEEEe
Q 016363 324 RSVCGTYFGG--LKP-------RSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 324 ~~i~g~~~~~--~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
..+.+..+.. ... ...++++++++.++.+++. +++.+ +++++++|++.+.++... |++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 262 ISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred eEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 5555433221 100 1457889999999977643 33444 478999999999888765 88864
No 90
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=1.1e-36 Score=291.63 Aligned_cols=314 Identities=23% Similarity=0.303 Sum_probs=258.2
Q ss_pred eeEEEeecCCCC---cEEEEeecCCCCC-CeEEEEEeeeecccccccccccCCCCCCC---CCCcccccceeEEEEEeCC
Q 016363 16 CKAAICRIPGKP---LVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKSSTDLPKL---PLPVIFGHEAVGVVESVGE 88 (390)
Q Consensus 16 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~vG~ 88 (390)
|||+++.+++.+ +.+.+.|.|+|.+ ++|+||+.++++|+.|+..+.|..+.... ..|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999998875 8999999998887 99999999999999999998886543210 1677999999999999999
Q ss_pred CCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCce
Q 016363 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (390)
Q Consensus 89 ~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v 168 (390)
+++.|++||+|++... ..|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999986421 0158999999999999
Q ss_pred EEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh----hhHHHH
Q 016363 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIG 243 (390)
Q Consensus 169 ~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~----~~~~~~ 243 (390)
+++|+++++++++.+++.++|||+++.....+++|++|||+|+ |++|++++|+|+++|+ +|+++++++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999877788999999999998 9999999999999999 888888776 678888
Q ss_pred HhcCCcEEEcCCCCCCc---CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-
Q 016363 244 KKFGITDFINPATCGDK---TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE- 319 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~---~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~- 319 (390)
+++|+++++++.. . ++...+.++.++++|++|||+|+.. ....+++++++ |+++.+|..... ...++...
T Consensus 192 ~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~ 265 (341)
T cd08290 192 KALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLL 265 (341)
T ss_pred HhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHH
Confidence 8899999998765 3 6777777776558999999999876 77889999999 999999854322 23344433
Q ss_pred hhcceeEEeeecCCCC-------chhhHHHHHHHHHcCCCCCccceeeee---ccccHHHHHHHHhcCCce-EEEEec
Q 016363 320 ILKGRSVCGTYFGGLK-------PRSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 320 ~~~~~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~---~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+.++.++.+....... ....+..+++++.++++.+. ....+ +++++.+|++.+.++... |+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 266 IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred hhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 4558888887654321 11357788899999987754 33556 999999999999877765 998864
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.6e-36 Score=286.85 Aligned_cols=315 Identities=21% Similarity=0.254 Sum_probs=259.1
Q ss_pred eeeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 15 t~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
||||+++.+++.. +++.+.+.|++.++|++|||.++++|+.|+....|..+.. ...|.++|+|++|+|+++|++++.
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~ 79 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPP-PGSSEILGLEVAGYVEDVGSDVKR 79 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccceeeEEEEEEeCCCCCC
Confidence 7999999988753 7777878888999999999999999999999887755332 145678999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|++... .|+|++|+.++.+.++++|
T Consensus 80 ~~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~v~~~~~~~ip 110 (334)
T PTZ00354 80 FKEGDRVMALLP-------------------------------------------------GGGYAEYAVAHKGHVMHIP 110 (334)
T ss_pred CCCCCEEEEecC-------------------------------------------------CCceeeEEEecHHHcEeCC
Confidence 999999986421 1489999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++.+++.+++++.|||+++.....+++|++|+|+|+ |++|++++++|+.+|+ +++++++++++.+.++++|++.+
T Consensus 111 ~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 189 (334)
T PTZ00354 111 QGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIIL 189 (334)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence 999999999999999999999877789999999999997 9999999999999999 77888999999999999999888
Q ss_pred EcCCCCCCcC-HHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcc-cchHhhhc-ceeEE
Q 016363 252 INPATCGDKT-VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK-GRSVC 327 (390)
Q Consensus 252 ~~~~~~~~~~-~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~-~~~i~ 327 (390)
++... .+ +.+.+.+++++ ++|++||++++.. +..++++++++ |+++.+|..... ... ++...+.. +.++.
T Consensus 190 ~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (334)
T PTZ00354 190 IRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGGA-KVEKFNLLPLLRKRASII 263 (334)
T ss_pred EecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCCC-cccccCHHHHHhhCCEEE
Confidence 88755 44 77888888876 9999999998765 88999999999 999999854322 222 44443333 55777
Q ss_pred eeecCCCCc-------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 328 GTYFGGLKP-------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 328 g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
++....... .+.+++++++++++.+++. +.+.+++++++++++.+.++... |+++.+.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 264 FSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred eeeccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 775543221 1234678889999977643 66889999999999998877655 99997653
No 92
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.6e-36 Score=287.60 Aligned_cols=312 Identities=23% Similarity=0.261 Sum_probs=257.0
Q ss_pred eeeEEEeecCCC----CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 15 RCKAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 15 t~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
+|||+++.+++. ++++++.+.|.+.++|++|||.++++|+.|+....|..... ..+|.++|+|++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~p~~~g~e~~G~v~~vG~~v 79 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-VKPPFDCGFEGVGEVVAVGEGV 79 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC-CCCCcccCceeEEEEEEECCCC
Confidence 589999998765 48999999999999999999999999999999887765432 1578899999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+.+++||+|++... |+|++|+.++.+.+++
T Consensus 80 ~~~~~Gd~V~~~~~--------------------------------------------------g~~~s~~~v~~~~~~~ 109 (329)
T cd08250 80 TDFKVGDAVATMSF--------------------------------------------------GAFAEYQVVPARHAVP 109 (329)
T ss_pred CCCCCCCEEEEecC--------------------------------------------------cceeEEEEechHHeEE
Confidence 99999999986421 4899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
+|++ +.+++.+++++.|||+++.+..++++|++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++
T Consensus 110 ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 186 (329)
T cd08250 110 VPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCD 186 (329)
T ss_pred CCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCc
Confidence 9997 45677888999999999877789999999999997 9999999999999999 899999999999999999998
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC---------CCcccchHhh
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---------SPISLNSIEI 320 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---------~~~~~~~~~~ 320 (390)
.+++... .++.+.+.+..++++|++||++|+.. +..++++++++ |+++.+|..... ....+....+
T Consensus 187 ~v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 261 (329)
T cd08250 187 RPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLL 261 (329)
T ss_pred eEEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHh
Confidence 8887665 56777776665458999999999755 88999999999 999999865422 1112333334
Q ss_pred hcceeEEeeecCCCC--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 321 LKGRSVCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 321 ~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
.++.++.++...... ..+.+.+++++++++.+++.....+.++++++++|++.+.++... |++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 262 AKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred hcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 558888887644321 235577889999999877644344679999999999999887765 88864
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.2e-35 Score=282.17 Aligned_cols=313 Identities=19% Similarity=0.205 Sum_probs=246.5
Q ss_pred eeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||++++++++ ++++.+.|.|.+++++|+|++.++++|++|+..+.|..+.. ..+|.++|||++|+|+++ +++.|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~--~~~~~ 77 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVT-RNYPHTPGIDAAGTVVSS--DDPRF 77 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCC-CCCCCccCcccEEEEEEe--CCCCC
Confidence 78999999986 69999999999999999999999999999999988875432 146789999999999999 45789
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... ..|+..+ |+|++|+.++++.++++|+
T Consensus 78 ~~Gd~V~~~~~------------------------~~g~~~~-------------------g~~~~~~~v~~~~~~~lp~ 114 (325)
T cd05280 78 REGDEVLVTGY------------------------DLGMNTD-------------------GGFAEYVRVPADWVVPLPE 114 (325)
T ss_pred CCCCEEEEccc------------------------ccCCCCC-------------------ceeEEEEEEchhhEEECCC
Confidence 99999987521 0122222 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhC--CC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAG--VE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~--~~-~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
++++.+++.+++.+.|||+++....+ +. .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 193 (325)
T cd05280 115 GLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGAS 193 (325)
T ss_pred CCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCc
Confidence 99999999999999999998755443 35 4579999998 9999999999999999 899999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEE
Q 016363 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVC 327 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~ 327 (390)
++++..+ . ...+.+...+ ++|+|||++++.. +..++++++++ |+++.+|...... ..++...+ .++.++.
T Consensus 194 ~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~ 265 (325)
T cd05280 194 EVLDRED---L--LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGPE-LTTTVLPFILRGVSLL 265 (325)
T ss_pred EEEcchh---H--HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCCc-cccccchheeeeeEEE
Confidence 9887654 2 2233333344 8999999999865 99999999999 9999999654322 23444444 4588888
Q ss_pred eeecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 328 GTYFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 328 g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
+........ .+.++.+.+++..+... .+..+|+++++++|++.+.++... |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 266 GIDSVNCPMELRKQVWQKLATEWKPDLLE---IVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred EEEeecCchhHHHHHHHHHHHHHhcCCcc---ceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 876543321 12334455555555222 266899999999999999888766 988864
No 94
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.8e-35 Score=278.19 Aligned_cols=304 Identities=22% Similarity=0.344 Sum_probs=246.7
Q ss_pred ecCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccccc-ccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEe
Q 016363 22 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 100 (390)
Q Consensus 22 ~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~ 100 (390)
++++. +++.+++.|++.++||+|++.++++|+.|+..+ .|.........|.++|+|++|+|+++|++++.+++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34444 899999999999999999999999999999887 6653222113578999999999999999999999999998
Q ss_pred eecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchh
Q 016363 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180 (390)
Q Consensus 101 ~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~a 180 (390)
.... |+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~~--------------------------------------------------g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLSG--------------------------------------------------GAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred EecC--------------------------------------------------CcceeeEEEchhheEECCCch--hhh
Confidence 7532 489999999999999999998 233
Q ss_pred hccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCc
Q 016363 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
+....++++||+++. ..+++++++|+|+|+|.+|++++++|+.+|+++|+++++++++.++++++|++.+++.+. .
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~ 184 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---E 184 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---c
Confidence 322367889998874 888999999999988999999999999999933999999999999999999988887665 6
Q ss_pred CHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeeecCCCC-ch
Q 016363 261 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLK-PR 337 (390)
Q Consensus 261 ~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-~~ 337 (390)
++.+.+.+++++ ++|++|||+|+...+...+++++++ |+++.+|... .....+++.. ..++..+.++...... ..
T Consensus 185 ~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (312)
T cd08269 185 AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGL 262 (312)
T ss_pred CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchh
Confidence 788888888877 9999999998877689999999999 9999998653 2233344333 3347777666433321 24
Q ss_pred hhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc--eEEEE
Q 016363 338 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCII 384 (390)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~--~kvvl 384 (390)
+.+++++++++++++++...+.+.|+++++++|++.+.++.. +|+++
T Consensus 263 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 263 EGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred hHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 678999999999988865556688999999999999988754 48886
No 95
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.2e-35 Score=284.41 Aligned_cols=315 Identities=25% Similarity=0.311 Sum_probs=250.4
Q ss_pred eeEEEeecCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 16 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|||++++.++ ..+++.+++.|.|+++||+|++.++++|++|+....+.. .. ..|.++|+|++|+|+.+|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~--~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IP--SYPAILGCDFAGTVVEVGSGVTRFK 77 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-cc--CCCceeeeeeeEEEEEeCCCcCcCC
Confidence 6899999985 338899999999999999999999999999999876654 11 3567899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.....|+ +.. ..|+|++|+.++.+.++++|++
T Consensus 78 ~Gd~V~~~~~~~~~----------------------~~~-------------------~~g~~~~~~~v~~~~~~~ip~~ 116 (339)
T cd08249 78 VGDRVAGFVHGGNP----------------------NDP-------------------RNGAFQEYVVADADLTAKIPDN 116 (339)
T ss_pred CCCEEEEEeccccC----------------------CCC-------------------CCCcccceEEechhheEECCCC
Confidence 99999987543221 001 1258999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGV----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~----------~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
+++.+++.+++.+.|||+++.+..++ +++++|||+|+ |.+|++++++|+.+|+ +|++++ ++++.+.+
T Consensus 117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~ 194 (339)
T cd08249 117 ISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLV 194 (339)
T ss_pred CCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHH
Confidence 99999999999999999988666554 78999999998 9999999999999999 888888 66899999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhcc--CCceEEEEcccCCCCCcccchHhhh
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE--GWGKTVILGVEMHGSPISLNSIEIL 321 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~ 321 (390)
+++|++++++..+ .++.+.+++++++++|++||++|++..+..+++++++ + |+++.+|...... .+... .
T Consensus 195 ~~~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~~~~--~ 266 (339)
T cd08249 195 KSLGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EPRKG--V 266 (339)
T ss_pred HhcCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cCCCC--c
Confidence 9999999998876 6788888877766999999999985558999999999 8 9999998654321 11100 0
Q ss_pred cceeEEeeecC------CCCchhhHHHHHHHHHcCCCCCccceeeeec--cccHHHHHHHHhcCC-ce-EEEEec
Q 016363 322 KGRSVCGTYFG------GLKPRSDIATLAQKYLDKELNLGEFITHEVS--FHDINKAFDLLLEGK-SL-RCIIWM 386 (390)
Q Consensus 322 ~~~~i~g~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--l~~~~~A~~~~~~~~-~~-kvvl~~ 386 (390)
....+...... .......+..++++++++++.+. ....++ ++++++|++.+..+. .. |+|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 267 KVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred eEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 11111111111 11123457788999999988865 335667 999999999998887 65 999864
No 96
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.9e-35 Score=280.70 Aligned_cols=299 Identities=22% Similarity=0.265 Sum_probs=253.2
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCC
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~ 107 (390)
+.+.+.+.|++.+++|+|||.++++|+.|+..+.+..... ..+|.++|+|++|+|+.+|++++.+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSR-PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG--- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCC-CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC---
Confidence 5666778888999999999999999999999887765432 146789999999999999999999999999987531
Q ss_pred CCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccch
Q 016363 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187 (390)
Q Consensus 108 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 187 (390)
.|+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 90 ----------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~ 123 (323)
T cd05282 90 ----------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINP 123 (323)
T ss_pred ----------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccH
Confidence 1489999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHH
Q 016363 188 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 188 ~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
++||+++.....+.+|++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.++++.. .++...+
T Consensus 124 ~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~ 199 (323)
T cd05282 124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRV 199 (323)
T ss_pred HHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHH
Confidence 999999888888999999999998 9999999999999999 8999999999999999999999998765 5788888
Q ss_pred HhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhh-cceeEEeeecCCCCc-------h
Q 016363 267 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP-------R 337 (390)
Q Consensus 267 ~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~ 337 (390)
.+++++ ++|++|||+|+.. ....+++++++ |+++.+|..... ...++...+. ++.++.+.....+.. .
T Consensus 200 ~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (323)
T cd05282 200 KEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQ 276 (323)
T ss_pred HHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHH
Confidence 888877 9999999999977 67889999999 999999865443 3445555555 688888876554321 2
Q ss_pred hhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 338 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+.+.++++++.++++.+. +++.|+++++++|++.+.++... |++++
T Consensus 277 ~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 277 ETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 457778899999987653 56889999999999999887665 88763
No 97
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3e-35 Score=277.16 Aligned_cols=297 Identities=20% Similarity=0.277 Sum_probs=244.2
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++.+.+ | +++.+.+.|.++++|++||+.++++|+.|++...+. ..|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~~~ 73 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGSGP 73 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCCCC
Confidence 5888888754 3 777788889999999999999999999999876521 235689999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... .|+|++|+.++.+.++++|+
T Consensus 74 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~v~~~~~~~ip~ 104 (305)
T cd08270 74 AVGARVVGLGA-------------------------------------------------MGAWAELVAVPTGWLAVLPD 104 (305)
T ss_pred CCCCEEEEecC-------------------------------------------------CcceeeEEEEchHHeEECCC
Confidence 99999986421 15899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++++++.+++.+.|||+++...... +|++|+|+|+ |++|++++++|+..|+ +|+++++++++.+.++++|++.++
T Consensus 105 ~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 182 (305)
T cd08270 105 GVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVV 182 (305)
T ss_pred CCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 999999999999999999988655545 5999999998 9999999999999999 899999999999999999987665
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhc---ceeEEee
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK---GRSVCGT 329 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~---~~~i~g~ 329 (390)
+... ++.++++|+++|++|+.. +..++++++.+ |+++.+|... .....++...+.. +.++.++
T Consensus 183 ~~~~-----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (305)
T cd08270 183 VGGS-----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTF 248 (305)
T ss_pred eccc-----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEE
Confidence 4322 122347999999999875 89999999999 9999999654 2233344444444 7788887
Q ss_pred ecCC-CCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 330 YFGG-LKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 330 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+.. ....+.+..++++++++++++. +.++++++++++|++.+.++... |+++.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 249 FLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred EccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 6553 1124568889999999988754 66899999999999999877765 998864
No 98
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.5e-36 Score=282.22 Aligned_cols=303 Identities=23% Similarity=0.328 Sum_probs=230.4
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCC--CCCCcccccceeEEEE---EeC-CCCCcCCCCCEEee
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAVGVVE---SVG-EYVEEVKERDLVLP 101 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~G~V~---~vG-~~v~~~~vGd~V~~ 101 (390)
....+.++|.|.+++++|++.++++|+.|+.+..|...... .++|.+++.++.|.+. .+| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 45568899999999999999999999999999998776552 2467555555555533 333 22233444444433
Q ss_pred ecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhh
Q 016363 102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181 (390)
Q Consensus 102 ~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa 181 (390)
. ...|+|+||+++|...++++|+++++.+||
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 223689999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHh------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcC
Q 016363 182 LLSCGVSTGVGAAWKVA------GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~------~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~ 254 (390)
.+|.++.|||.++.... ++++|++|||+|+ |++|++++|+|+..++ ..++++.++++.++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999998889 8999999999987 9999999999999996 56666779999999999999999999
Q ss_pred CCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCC-Ccccc-hHhhhcceeEEeee--
Q 016363 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS-PISLN-SIEILKGRSVCGTY-- 330 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~-~~~~~~~~~i~g~~-- 330 (390)
++ .++.+.+++.+++++|+||||+|+.. ......++... |+...++...... ..... .......+.+....
T Consensus 210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (347)
T KOG1198|consen 210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLK 284 (347)
T ss_pred CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeee
Confidence 98 89999999988449999999999976 77777888877 6644555332110 11110 00001111111111
Q ss_pred ------cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 331 ------FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 331 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
.......+.+..+.++++++++.+ .+++.||++++.+|++++..+... |++++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~l~~~ie~gkikp--~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 285 GVNYRWLYFVPSAEYLKALVELIEKGKIKP--VIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred ccceeeeeecCCHHHHHHHHHHHHcCcccC--CcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 111223577889999999995554 488999999999999999887665 9999875
No 99
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=7.9e-35 Score=275.65 Aligned_cols=311 Identities=21% Similarity=0.313 Sum_probs=250.8
Q ss_pred eeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++...+. .+++.+.+.|.+.++|++||+.++++|+.|+....+..+.. ..|.++|||++|+|+++|+ ..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~vG~--~~~ 76 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV--KFPRVLGIEAVGEVEEAPG--GTF 76 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCccccceeEEEEEEecC--CCC
Confidence 68888887764 26777777778899999999999999999999988865433 5688999999999999995 579
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.... .+...+ |+|++|+.++.+.++++|+
T Consensus 77 ~~Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~~~~~~~~~ip~ 113 (320)
T cd08243 77 TPGQRVATAMGG------------------------MGRTFD-------------------GSYAEYTLVPNEQVYAIDS 113 (320)
T ss_pred CCCCEEEEecCC------------------------CCCCCC-------------------cccceEEEcCHHHcEeCCC
Confidence 999999876320 111111 4899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++++++.+++++.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|+++++
T Consensus 114 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 192 (320)
T cd08243 114 DLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVV 192 (320)
T ss_pred CCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEE
Confidence 99999999999999999999878788999999999998 9999999999999999 899999999999999999998887
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCc-ccchHh---hhcceeEEe
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIE---ILKGRSVCG 328 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~---~~~~~~i~g 328 (390)
+. . .++.+.+.++ ++++|++||++|+.. ....+++++++ |+++.+|........ ...... +.++..+.+
T Consensus 193 ~~-~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (320)
T cd08243 193 ID-D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTG 265 (320)
T ss_pred ec-C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEe
Confidence 54 3 4677788877 449999999999865 88999999999 999999964322111 111222 234667766
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
....... ...+..++++++++.+.+. ..+.|+++++++|++.+.++... |+++
T Consensus 266 ~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 266 SSSGDVP-QTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred cchhhhh-HHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 6533221 3467889999999977643 55889999999999999877665 7775
No 100
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=5.2e-35 Score=259.93 Aligned_cols=298 Identities=20% Similarity=0.227 Sum_probs=242.2
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeC--CCCCcCCCCCEEeeeccc
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG--EYVEEVKERDLVLPIFHR 105 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~vGd~V~~~~~~ 105 (390)
|+++++++|+|++||||+|++|.|++|.-...+ +..+.. -.|.-+|-..+|.++... |....|++||.|++..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm-~d~~SY--~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~-- 101 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRM-SDAPSY--APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS-- 101 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecc-cCCccc--CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc--
Confidence 999999999999999999999999999533222 222222 235666766655544432 4567899999998752
Q ss_pred CCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCC-Ccch-hhcc
Q 016363 106 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI-PLGI-ACLL 183 (390)
Q Consensus 106 ~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~-~~~~-aa~~ 183 (390)
+|++|.+++.+.+.+++++. ++.. ...+
T Consensus 102 --------------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvL 131 (340)
T COG2130 102 --------------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVL 131 (340)
T ss_pred --------------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhc
Confidence 79999999999999998653 2222 2337
Q ss_pred ccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcC
Q 016363 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKT 261 (390)
Q Consensus 184 ~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~ 261 (390)
.++..|||.+|.+..+.++|++|+|.+| |++|..+.|+||..|+ +||+++.+++|.+++++ +|.|.++||+. ++
T Consensus 132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d 207 (340)
T COG2130 132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---ED 207 (340)
T ss_pred CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---cc
Confidence 8899999999999999999999999998 9999999999999999 99999999999999988 99999999998 89
Q ss_pred HHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC--CCcccc----hHhhhcceeEEeeecCCCC
Q 016363 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG--SPISLN----SIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 262 ~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~--~~~~~~----~~~~~~~~~i~g~~~~~~~ 335 (390)
+.+.+.+..++|+|+.||++|++. +...+..|+.. +|++.||.-+.- ...+.. +..+.+.+++.|+-.....
T Consensus 208 ~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~ 285 (340)
T COG2130 208 FAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDY 285 (340)
T ss_pred HHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhh
Confidence 999999999999999999999998 99999999999 999999964321 112222 2223347788888663322
Q ss_pred ---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 336 ---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 336 ---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
..+..+++..|+++||++... +-+-.||++++||..+.+++++ |+|+++.+
T Consensus 286 ~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 286 DQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 236788999999999999885 4466799999999999999997 99999764
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.3e-34 Score=275.38 Aligned_cols=315 Identities=15% Similarity=0.191 Sum_probs=240.5
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++.+++++ +.+.+.+.|.|+++||+||+.++++|++|.....+..... ..+|.++|||++|+|+++| +++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~V~~~~--~~~~ 77 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIV-KRYPFIPGIDLAGTVVESN--DPRF 77 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCcccc-CCCCcCcccceeEEEEEcC--CCCC
Confidence 789999988764 7888999999999999999999999999987664322111 1468899999999999965 4779
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|+..+.. .|.... |+|++|+.++++.++++|+
T Consensus 78 ~~Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~v~~~~~~~~p~ 114 (326)
T cd08289 78 KPGDEVIVTSYD------------------------LGVSHH-------------------GGYSEYARVPAEWVVPLPK 114 (326)
T ss_pred CCCCEEEEcccc------------------------cCCCCC-------------------CcceeEEEEcHHHeEECCC
Confidence 999999875320 121112 5899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHh--C-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVA--G-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~--~-~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
++++++++.+++.+.|||+++.... . ...+++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+.++++|++
T Consensus 115 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 193 (326)
T cd08289 115 GLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAK 193 (326)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCC
Confidence 9999999999999999998875433 3 345789999998 9999999999999999 899999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEe
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 328 (390)
.+++.++ . ..+.+.++.++++|++||++|+.. ....+++++++ |+++.+|.... ...++....+ .++.++.+
T Consensus 194 ~v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~ 266 (326)
T cd08289 194 EVIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLG 266 (326)
T ss_pred EEEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEE
Confidence 9888765 2 345566664448999999999855 89999999999 99999996532 2233333334 45888888
Q ss_pred eecCCCCchhhHHHHHHHHHcCCCC---CccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 329 TYFGGLKPRSDIATLAQKYLDKELN---LGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
....... ......+++.+.+ .+. ....+.++|+++++.+|++.+.++... |+++++
T Consensus 267 ~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 267 IDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EEeEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 7532211 0112233333322 122 122356999999999999999888776 988764
No 102
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=2.4e-34 Score=273.35 Aligned_cols=311 Identities=17% Similarity=0.204 Sum_probs=245.4
Q ss_pred eEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||+++...+.+ +++++.|+|.+++++|+||+.++++|+.|+..+.|..... ..+|.++|||++|+|+. +++..|+
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~--~~~~~~~ 77 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVV-RSYPMIPGIDAAGTVVS--SEDPRFR 77 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCC-CCCCccceeeeEEEEEe--cCCCCCC
Confidence 68888887764 7899999999999999999999999999999888865332 15688999999999998 5567899
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++.... .|...+ |+|++|+.++.+.++++|++
T Consensus 78 ~Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~~~~~~~~~iP~~ 114 (323)
T TIGR02823 78 EGDEVIVTGYG------------------------LGVSHD-------------------GGYSQYARVPADWLVPLPEG 114 (323)
T ss_pred CCCEEEEccCC------------------------CCCCCC-------------------ccceEEEEEchhheEECCCC
Confidence 99999875310 111112 48999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHH--hCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKV--AGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~--~~~~~g~-~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~ 250 (390)
+++.+++.+++.+.+||.++... .++.+|+ +|+|+|+ |.+|++++++|+.+|+ +++++++++++.+.++++|++.
T Consensus 115 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 193 (323)
T TIGR02823 115 LSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASE 193 (323)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcE
Confidence 99999999999999998876433 3488999 9999998 9999999999999999 8998888899999999999988
Q ss_pred EEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEee
Q 016363 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGT 329 (390)
Q Consensus 251 v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 329 (390)
+++.++ .+. .++.+.++++|+++||+|+.. +..++++++++ |+++.+|.... ...+.+...+ .++.++.+.
T Consensus 194 ~~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (323)
T TIGR02823 194 VIDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGI 265 (323)
T ss_pred EEcccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEE
Confidence 887654 222 455555557999999999875 88999999999 99999996532 2233333334 558888886
Q ss_pred ecCCCCc---hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 330 YFGGLKP---RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 330 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
....... .+.+..+.+++..++++. .+ +.|+++++++|++.+.++... |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 266 DSVYCPMALREAAWQRLATDLKPRNLES--IT-REITLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred eccccCchhHHHHHHHHHHHhhcCCCcC--ce-eeecHHHHHHHHHHHhCCCccceEEEe
Confidence 5432211 223556666777776543 24 689999999999999888776 98875
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=2.3e-34 Score=274.86 Aligned_cols=312 Identities=21% Similarity=0.207 Sum_probs=251.8
Q ss_pred eeEEEeecCCCC-----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCC
Q 016363 16 CKAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (390)
Q Consensus 16 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (390)
|||+++.+++++ +++.+++.|++.+++++|++.++++|+.|+..+.+..+.. ..|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~v 78 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVP--GQPKILGWDASGVVEAVGSEV 78 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCC--CCCcccccceEEEEEEcCCCC
Confidence 589999998863 5666777888899999999999999999999887765433 467789999999999999999
Q ss_pred CcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEE
Q 016363 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (390)
Q Consensus 91 ~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~ 170 (390)
+.|++||+|+.... ... .|+|++|+.++.+.+++
T Consensus 79 ~~~~~Gd~V~~~~~---------------------------~~~-------------------~g~~~~~~~v~~~~~~~ 112 (336)
T cd08252 79 TLFKVGDEVYYAGD---------------------------ITR-------------------PGSNAEYQLVDERIVGH 112 (336)
T ss_pred CCCCCCCEEEEcCC---------------------------CCC-------------------CccceEEEEEchHHeee
Confidence 99999999986421 001 14899999999999999
Q ss_pred cCCCCCcchhhccccchhhHHHHHHHHhCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEecCChhhHHHH
Q 016363 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG 243 (390)
Q Consensus 171 ~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~-----g~~VlI~Ga-g~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~ 243 (390)
+|+++++++++.+++.+.|||+++.+.+++++ |++|+|+|+ |++|++++++|+.+| + +|+++++++++.+.+
T Consensus 113 ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~ 191 (336)
T cd08252 113 KPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWV 191 (336)
T ss_pred CCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHH
Confidence 99999999999999999999999878888888 999999997 999999999999999 7 999999999999999
Q ss_pred HhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hc
Q 016363 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LK 322 (390)
Q Consensus 244 ~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~ 322 (390)
+++|++++++... ++.+.+.....+++|++||++|+...+..++++++.+ |+++.+|... ..++...+ .+
T Consensus 192 ~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~ 262 (336)
T cd08252 192 KELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSK 262 (336)
T ss_pred HhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcc
Confidence 9999999887653 5666666443348999999999766689999999999 9999998542 23333334 35
Q ss_pred ceeEEeeecCCC---------CchhhHHHHHHHHHcCCCCCccc-eeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 323 GRSVCGTYFGGL---------KPRSDIATLAQKYLDKELNLGEF-ITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 323 ~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
+.++.+..+... ...+.+.++++++.++.+++... ..+.++++++++|++.+.++... |++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 263 SASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred cceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 777776544321 11245778999999998775321 12458999999999999887766 88764
No 104
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=1.3e-33 Score=267.31 Aligned_cols=316 Identities=22% Similarity=0.287 Sum_probs=257.6
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||+++++.++.+ +.+.+.+.|.+.+++++|++.++++|++|+....|..... ..+|.++|||++|+|+.+|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGL-PPLPYVPGSDGAGVVEAVGEGVDGL 79 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCC-CCCCeecccceEEEEEeeCCCCCCC
Confidence 578888876543 8888888888999999999999999999999887765432 2578899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.... ... ..|++++|+.++.+.++++|+
T Consensus 80 ~~Gd~v~~~~~~--------------------------~~~------------------~~g~~~~~~~~~~~~~~~ip~ 115 (325)
T cd08253 80 KVGDRVWLTNLG--------------------------WGR------------------RQGTAAEYVVVPADQLVPLPD 115 (325)
T ss_pred CCCCEEEEeccc--------------------------cCC------------------CCcceeeEEEecHHHcEeCCC
Confidence 999999876420 000 014799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++++.+||+++....++.+|++|+|+|+ |++|++++++++..|+ +|+++++++++.+.+.++|++.++
T Consensus 116 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 194 (325)
T cd08253 116 GVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVF 194 (325)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999999877799999999999997 9999999999999999 899999999999999999998888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHh-hhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 330 (390)
+... .++.+.+.+++.+ ++|++++++++.. ....+++++.+ |+++.+|... ....++... +.++.++.+..
T Consensus 195 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd08253 195 NYRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVL 267 (325)
T ss_pred eCCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeee
Confidence 7765 6787888887766 8999999999876 78889999999 9999998654 222333343 34477777665
Q ss_pred cCCCC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
..... ..+.+..+.+++.++.+++. .++.|++++++++++.+.++... |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 268 LYTATPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred hhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 43321 12345566677888866543 56889999999999999877665 888753
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=2.9e-33 Score=264.15 Aligned_cols=309 Identities=24% Similarity=0.281 Sum_probs=252.6
Q ss_pred eEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||+.+..++.+ +.+.+.+.+.+.+++++|+|.++++|+.|+....+..+. .+|.++|||++|+|+.+|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~---~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEGAGVVEAVGPGVTGFK 77 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC---CCCccCCcceeEEEEEECCCCCCCC
Confidence 45666655543 667677777789999999999999999999988775432 3577899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++... .|+|++|+.++.+.++++|++
T Consensus 78 ~G~~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 108 (320)
T cd05286 78 VGDRVAYAGP-------------------------------------------------PGAYAEYRVVPASRLVKLPDG 108 (320)
T ss_pred CCCEEEEecC-------------------------------------------------CCceeEEEEecHHHceeCCCC
Confidence 9999986420 147999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+++.+++.+++...++|+++.+..++++|++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++.+++
T Consensus 109 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 187 (320)
T cd05286 109 ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVIN 187 (320)
T ss_pred CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEe
Confidence 9999999999999999999888899999999999997 9999999999999999 8999999999999999999988887
Q ss_pred CCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeeec
Q 016363 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (390)
... .++.+.+.+++.+ ++|++|+|+++.. ...++++++++ |+++.+|..... ...++...+ .++.++.+...
T Consensus 188 ~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 261 (320)
T cd05286 188 YRD---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSL 261 (320)
T ss_pred CCc---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEeh
Confidence 665 6788888888877 8999999999865 88999999999 999999865432 223334334 45777765433
Q ss_pred CCCC-c----hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 332 GGLK-P----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 332 ~~~~-~----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.... . .+.+.+++++++++.+.+. ..+.|+++++++|++.+.++... |+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 262 FHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 2221 1 2345678889999877654 55889999999999999887765 888764
No 106
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=3.5e-34 Score=275.22 Aligned_cols=313 Identities=21% Similarity=0.254 Sum_probs=241.6
Q ss_pred eeEEEeecCCCC---cEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCC-------------CCCCCCcccccc
Q 016363 16 CKAAICRIPGKP---LVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDL-------------PKLPLPVIFGHE 78 (390)
Q Consensus 16 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~-------------~~~~~p~~~G~e 78 (390)
|||+++++++++ ++++++++|+| +++||+|||.++++|++|+....|.... ....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999988875 88899999988 4999999999999999999988774210 012568899999
Q ss_pred eeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccc
Q 016363 79 AVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFT 158 (390)
Q Consensus 79 ~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a 158 (390)
++|+|+.+|+++++|++||+|++.... +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999875321 0125899
Q ss_pred eeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe
Q 016363 159 EYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV----GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (390)
Q Consensus 159 ~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~----g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~ 233 (390)
+|+.++.+.++++|+++++.+++.+++.+.|||+++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999999877777754 999999997 9999999999999999 88888
Q ss_pred cCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC-
Q 016363 234 DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP- 312 (390)
Q Consensus 234 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~- 312 (390)
+++ ++.+.++++|.+.+++... .++.+.+.+. +++|++||++|+.. ...++++++++ |+++.+|.......
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~ 265 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT-EKWALKLLKKG-GTYVTLVSPLLKNTD 265 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH-HHHHHHHhccC-CEEEEecCCcccccc
Confidence 854 6788888999988887665 4555554432 38999999999885 89999999999 99999985431111
Q ss_pred -ccc--ch----Hhhhc-cee-EE-ee---ecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCc
Q 016363 313 -ISL--NS----IEILK-GRS-VC-GT---YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS 379 (390)
Q Consensus 313 -~~~--~~----~~~~~-~~~-i~-g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~ 379 (390)
... .+ ..+.. ... +. .. +.......+.+.+++++++++.+.+ .+.+.|+++++.+|++.+.++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~ 343 (350)
T cd08248 266 KLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHA 343 (350)
T ss_pred cccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCC
Confidence 011 00 01111 100 00 00 0000112467889999999997654 36689999999999999987765
Q ss_pred e-EEEEe
Q 016363 380 L-RCIIW 385 (390)
Q Consensus 380 ~-kvvl~ 385 (390)
. |++++
T Consensus 344 ~~~vv~~ 350 (350)
T cd08248 344 RGKTVIK 350 (350)
T ss_pred ceEEEeC
Confidence 5 87763
No 107
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2.2e-33 Score=265.24 Aligned_cols=310 Identities=21% Similarity=0.280 Sum_probs=255.9
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++.+++.+ +++.+.+.|.+.+++++||+.++++|+.|+....+..... ..+|.++|||++|+|+++|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPP-PGASDILGLEVAGVVVAVGPGVTGW 79 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCC-CCCCCcccceeEEEEEeeCCCCCCC
Confidence 689999886543 7777887778899999999999999999998887754332 2568899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... .|+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~ 110 (323)
T cd05276 80 KVGDRVCALLA-------------------------------------------------GGGYAEYVVVPAGQLLPVPE 110 (323)
T ss_pred CCCCEEEEecC-------------------------------------------------CCceeEEEEcCHHHhccCCC
Confidence 99999986421 14799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.++.++.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd05276 111 GLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAI 189 (323)
T ss_pred CCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999999877889999999999998 9999999999999999 899999999999999889988888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
+... .++.+.+.+...+ ++|+++|++|+.. ....+++++++ |+++.+|...... ..++...+ .++.++.++.
T Consensus 190 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (323)
T cd05276 190 NYRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGST 263 (323)
T ss_pred eCCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEee
Confidence 7765 5677888877766 8999999999877 88899999999 9999998654322 23333334 4588888876
Q ss_pred cCCCCc-------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 331 FGGLKP-------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 331 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
...... .+.+.++++++.++++.+. .++.|+++++++|++.+.++... |+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 264 LRSRSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred ccchhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 554310 1335677888888877543 66899999999999999877655 7763
No 108
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=3.6e-33 Score=265.34 Aligned_cols=313 Identities=16% Similarity=0.188 Sum_probs=246.6
Q ss_pred eeEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++++++. .+++++.|.|+|+++|++||+.++++|+.|+..+.|..... ..+|.++|||++|+|++ ++++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~V~~--~~~~~~ 77 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIV-RTFPLVPGIDLAGTVVE--SSSPRF 77 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcccc-CCCCCccccceEEEEEe--CCCCCC
Confidence 78999998875 38899999999999999999999999999999887764322 14678899999999999 677889
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.... .+.. ..|+|++|+.++.+.++++|+
T Consensus 78 ~~Gd~V~~~~~~------------------------~~~~-------------------~~g~~~~~~~v~~~~~~~lp~ 114 (324)
T cd08288 78 KPGDRVVLTGWG------------------------VGER-------------------HWGGYAQRARVKADWLVPLPE 114 (324)
T ss_pred CCCCEEEECCcc------------------------CCCC-------------------CCCcceeEEEEchHHeeeCCC
Confidence 999999874210 0100 125899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHH--HHhCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc
Q 016363 174 HIPLGIACLLSCGVSTGVGAAW--KVAGVE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~--~~~~~~-~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~ 249 (390)
++++++++.+++.+++|+.++. +..+.. ++++|||+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|++
T Consensus 115 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~ 193 (324)
T cd08288 115 GLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGAS 193 (324)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCC
Confidence 9999999999999999987653 234455 6789999998 9999999999999999 899999999999999999999
Q ss_pred EEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEe
Q 016363 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328 (390)
Q Consensus 250 ~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 328 (390)
+++++++ +...+++++.+++|.++|++++.. ....+..++.+ |+++.+|.... ...+++...+ .++.++.+
T Consensus 194 ~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08288 194 EIIDRAE-----LSEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLG 265 (324)
T ss_pred EEEEcch-----hhHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEE
Confidence 9988754 233555565557999999999754 77888889988 99999986532 2223334444 45888888
Q ss_pred eecCCCC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 329 TYFGGLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 329 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
....... ..+.+..+.+++.++.+.+ +.+.++++++++|++.+.+++.. |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 266 IDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred EEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 7533322 2345667778888886653 25899999999999999888776 888763
No 109
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.4e-33 Score=264.11 Aligned_cols=312 Identities=21% Similarity=0.270 Sum_probs=254.3
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++.+++.+ +.+++.+.|++.+++|+|++.++++|++|+....+..... ...|.++|||++|+|+.+|+++..|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAAR-PPLPAILGCDVAGVVEAVGEGVTRF 79 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Confidence 689999988765 7788888888899999999999999999999887764322 1457889999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... |+.. ..|+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~--------------------------~~~~------------------~~g~~~~~~~v~~~~~~~~p~ 115 (326)
T cd08272 80 RVGDEVYGCAG--------------------------GLGG------------------LQGSLAEYAVVDARLLALKPA 115 (326)
T ss_pred CCCCEEEEccC--------------------------CcCC------------------CCCceeEEEEecHHHcccCCC
Confidence 99999987531 1100 015899999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++.+.+||+++.+..++++|++++|+|+ |.+|++++++++.+|+ +|++++++ ++.+.++++|.+.++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~ 193 (326)
T cd08272 116 NLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPII 193 (326)
T ss_pred CCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEE
Confidence 99999999999999999998888899999999999997 9999999999999999 89999988 889999889998888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeec
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (390)
+... . +.+.+.+++.+ ++|.++|++++.. ....+++++++ |+++.+|... ..++... ..++..+.+...
T Consensus 194 ~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~ 263 (326)
T cd08272 194 YYRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFT 263 (326)
T ss_pred ecch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEc
Confidence 7765 4 77888888877 8999999999865 88899999999 9999998553 1222222 244777666653
Q ss_pred CC--C---C---chhhHHHHHHHHHcCCCCCcccee-eeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 332 GG--L---K---PRSDIATLAQKYLDKELNLGEFIT-HEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 332 ~~--~---~---~~~~~~~~~~~~~~~~~~~~~~i~-~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.. . . ..+.+..+++++.++.+.+. ++ +.|++++++++++.+.++... |+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 264 LLPLLTGEGRAHHGEILREAARLVERGQLRPL--LDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccccchhhHHHHHHHHHHHHHCCCcccc--cccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 32 1 0 13567788889989876543 34 889999999999998876655 888764
No 110
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.4e-33 Score=262.34 Aligned_cols=310 Identities=24% Similarity=0.280 Sum_probs=249.9
Q ss_pred eeEEEeecCC--CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPG--KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+++.+++ ..+.+.+.+.|++.+++++|||.++++|+.|+....+..... ..|.++|||++|+|+.+|++++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~~~~~ 78 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW--SYPHVPGVDGAGVVVAVGAKVTGW 78 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCcccccceEEEEEEeCCCCCcC
Confidence 7999999998 359999999999999999999999999999998887764333 347789999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... +.. .|+|++|+.++.+.++++|+
T Consensus 79 ~~Gd~V~~~~~---------------------------~~~-------------------~~~~~s~~~~~~~~~~~ip~ 112 (325)
T cd08271 79 KVGDRVAYHAS---------------------------LAR-------------------GGSFAEYTVVDARAVLPLPD 112 (325)
T ss_pred CCCCEEEeccC---------------------------CCC-------------------CccceeEEEeCHHHeEECCC
Confidence 99999987531 001 14799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++.+.+||+++.+..++++|++|+|+|+ |.+|++++++++..|+ +|+++. ++++.+.+.++|++.++
T Consensus 113 ~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~ 190 (325)
T cd08271 113 SLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVI 190 (325)
T ss_pred CCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEe
Confidence 99999999999999999999888889999999999998 8999999999999999 888877 77888888889998888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcc-----eeE
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKG-----RSV 326 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~-----~~i 326 (390)
+... .++...+.++..+ ++|++++++++.. ....+++++++ |+++.+|...... . ...+..+ +.+
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~--~--~~~~~~~~~~~~~~~ 261 (325)
T cd08271 191 DYND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDAS--P--DPPFTRALSVHEVAL 261 (325)
T ss_pred cCCC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCc--c--hhHHhhcceEEEEEe
Confidence 7665 5677888888776 8999999999876 66789999999 9999987443221 1 1112222 233
Q ss_pred EeeecCCC-----CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 327 CGTYFGGL-----KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 327 ~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.+...... ...+.+.+++++++++++++. ..+.|+++++.+|++.+.++... |+++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 262 GAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 33221111 112446778899999977643 44889999999999999877665 888763
No 111
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.3e-33 Score=263.90 Aligned_cols=306 Identities=23% Similarity=0.300 Sum_probs=242.4
Q ss_pred eEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
||+++...+.+ +++.+.+.|.|.+++++|++.++++|+.|+.++.|..+.. ..+|.++|+|++|+|+.+|++++.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ-PPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC-CCCCcccccceEEEEEEeCCCCccCC
Confidence 68888887654 8888889999999999999999999999999888765432 14688999999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (331)
T cd08273 81 VGDRVAALTR-------------------------------------------------VGGNAEYINLDAKYLVPVPEG 111 (331)
T ss_pred CCCEEEEeCC-------------------------------------------------CcceeeEEEechHHeEECCCC
Confidence 9999987531 147999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~ 253 (390)
+++.+++.+++++.+||+++.+..++.+|++|+|+|+ |.+|++++++|+.+|+ +|++++. +++.+.++++|+.. ++
T Consensus 112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~ 188 (331)
T cd08273 112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-ID 188 (331)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-Ec
Confidence 9999999999999999999877789999999999998 9999999999999999 8999997 88888988899754 34
Q ss_pred CCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCc--ccchH-----------hh
Q 016363 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI--SLNSI-----------EI 320 (390)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~--~~~~~-----------~~ 320 (390)
... .++... +...+++|++++++++.. ...++++++++ |+++.+|........ .+++. ..
T Consensus 189 ~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (331)
T cd08273 189 YRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLL 261 (331)
T ss_pred CCC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcce
Confidence 333 344333 333448999999999887 88999999999 999999865433221 11111 01
Q ss_pred hc--ceeEEeeecCCC----CchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 321 LK--GRSVCGTYFGGL----KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 321 ~~--~~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
.. +.++.+...... ...+.+.+++++++++.+++ .+.++|+++++++|++.+.++... |+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 262 PTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred eccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 11 233333222110 01356788999999997764 366889999999999998877665 7765
No 112
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=4e-33 Score=257.45 Aligned_cols=269 Identities=29% Similarity=0.473 Sum_probs=223.2
Q ss_pred eEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCC
Q 016363 42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC 121 (390)
Q Consensus 42 evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c 121 (390)
||+|+|.++++|+.|+..+.|..+.. ..+|.++|+|++|+|+++|+.++.|++||+|++.+..+|++|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPP-PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcC-CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hC
Confidence 68999999999999999998876411 15688999999999999999999999999999999999999999997 67
Q ss_pred cCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCC
Q 016363 122 SKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 201 (390)
Q Consensus 122 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~ 201 (390)
..... .+.... |+|++|+.++.+.++++|+++++.+++.+++++.|||+++.....++
T Consensus 76 ~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~ 133 (271)
T cd05188 76 PGGGI---LGEGLD-------------------GGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK 133 (271)
T ss_pred CCCCE---eccccC-------------------CcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC
Confidence 55443 222222 58999999999999999999999999999999999999987777779
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~ 280 (390)
++++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|.+.+++..+ .++.+.+. ...+ ++|++|++
T Consensus 134 ~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~ 208 (271)
T cd05188 134 PGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDA 208 (271)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEEC
Confidence 99999999995599999999999998 9999999999999999999888887766 56666666 4454 89999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCCchhhHHHHHHH
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQK 346 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 346 (390)
++.......++++++++ |+++.+|..............+.+++++.++..+. ..++++++++
T Consensus 209 ~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 270 (271)
T cd05188 209 VGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL 270 (271)
T ss_pred CCCHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence 99844488999999999 99999996654333333334455689999987654 4567777665
No 113
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.3e-32 Score=264.80 Aligned_cols=317 Identities=20% Similarity=0.231 Sum_probs=238.2
Q ss_pred eeEEEeecCCCCcEEEEeecCCC---CCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCC-
Q 016363 16 CKAAICRIPGKPLVIEEIEVEPP---KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE- 91 (390)
Q Consensus 16 ~~a~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~- 91 (390)
.|++++.+++++++++..+.|.| ++++|+||+.++++|++|+..+.+..... ...|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHF-KVKEKGLGRDYSGVIVKVGSNVAS 79 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccccc-ccCCCccCceeEEEEEEeCccccc
Confidence 36899999988888887777766 89999999999999999998875432211 12477899999999999999998
Q ss_pred cCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC----c
Q 016363 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT----H 167 (390)
Q Consensus 92 ~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~ 167 (390)
.|++||+|++.....| + ..|+|++|++++.. .
T Consensus 80 ~~~~Gd~V~~~~~~~~-----------------------~---------------------~~g~~~~~~~v~~~~~~~~ 115 (352)
T cd08247 80 EWKVGDEVCGIYPHPY-----------------------G---------------------GQGTLSQYLLVDPKKDKKS 115 (352)
T ss_pred CCCCCCEEEEeecCCC-----------------------C---------------------CCceeeEEEEEccccccce
Confidence 8999999987642110 0 01589999999987 7
Q ss_pred eEEcCCCCCcchhhccccchhhHHHHHHHHh-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHH
Q 016363 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK 244 (390)
Q Consensus 168 v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~-~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~ 244 (390)
++++|+++++.+++.+++.+.|||+++.... ++++|++|+|+|+ |.+|++++++|+.+|. ++|+++. ++++.+.++
T Consensus 116 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~ 194 (352)
T cd08247 116 ITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNK 194 (352)
T ss_pred eEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHH
Confidence 9999999999999999999999999986666 7999999999998 8999999999998854 3567765 556666788
Q ss_pred hcCCcEEEcCCCCCCcC---HHHHHHhh-cCC-CccEEEEcccChHHHHHHHHHhc---cCCceEEEEcccCCCC--Ccc
Q 016363 245 KFGITDFINPATCGDKT---VSQVIKEM-TDG-GADYCFECIGLTSVMNDAFNSSR---EGWGKTVILGVEMHGS--PIS 314 (390)
Q Consensus 245 ~~g~~~v~~~~~~~~~~---~~~~i~~~-~~~-g~D~vid~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~--~~~ 314 (390)
++|++++++.++ .+ +...+.+. +++ ++|++|||+|+......++++++ ++ |+++.++...... ..+
T Consensus 195 ~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~ 270 (352)
T cd08247 195 KLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDT 270 (352)
T ss_pred HhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchh
Confidence 899999988765 34 44444444 424 99999999998655888999999 99 9999875222110 000
Q ss_pred --------cchHhhhcce-----eEEeeecCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-
Q 016363 315 --------LNSIEILKGR-----SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL- 380 (390)
Q Consensus 315 --------~~~~~~~~~~-----~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~- 380 (390)
+....+..+. .+...... ...+.+.++++++.++.+++ .+++.++++++++|++.+.++...
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~g 346 (352)
T cd08247 271 FNSWDNPSANARKLFGSLGLWSYNYQFFLLD--PNADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKG 346 (352)
T ss_pred hhhccccchhhhhhhhhhcCCCcceEEEEec--CCHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCC
Confidence 1111111122 22211111 11356788999999997654 366899999999999999887765
Q ss_pred EEEEec
Q 016363 381 RCIIWM 386 (390)
Q Consensus 381 kvvl~~ 386 (390)
|+++++
T Consensus 347 kvvi~~ 352 (352)
T cd08247 347 KVVIKV 352 (352)
T ss_pred cEEEeC
Confidence 988753
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=1.2e-32 Score=262.37 Aligned_cols=295 Identities=22% Similarity=0.247 Sum_probs=236.6
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccC
Q 016363 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 106 (390)
Q Consensus 28 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~ 106 (390)
+++.+.+.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+. +|++||+|++.
T Consensus 20 ~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~---- 93 (329)
T cd05288 20 FELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF---- 93 (329)
T ss_pred eeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc----
Confidence 899999999999999999999999999876555443211 10123567899999999999964 79999999753
Q ss_pred CCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeC-CceEEcCCCCC--cchhhc-
Q 016363 107 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIP--LGIACL- 182 (390)
Q Consensus 107 ~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~v~~~p~~~~--~~~aa~- 182 (390)
++|++|+.++. +.++++|++++ +.+++.
T Consensus 94 ------------------------------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~ 125 (329)
T cd05288 94 ------------------------------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGV 125 (329)
T ss_pred ------------------------------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHh
Confidence 26999999999 99999999995 555555
Q ss_pred cccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCc
Q 016363 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDK 260 (390)
Q Consensus 183 ~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~ 260 (390)
+++++.|||+++.+...+.++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.+++ +|+++++++++ .
T Consensus 126 l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~ 201 (329)
T cd05288 126 LGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT---P 201 (329)
T ss_pred cccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC---h
Confidence 88899999999877788999999999996 9999999999999999 89999999999999988 99999988776 5
Q ss_pred CHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcc----c-chHhhhcceeEEeeecCCCC
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS----L-NSIEILKGRSVCGTYFGGLK 335 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~-~~~~~~~~~~i~g~~~~~~~ 335 (390)
++.+.+.+++++++|++|||+|+.. +..++++++++ |+++.+|......... + ....+.++.++.+..+....
T Consensus 202 ~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (329)
T cd05288 202 DLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA 279 (329)
T ss_pred hHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH
Confidence 7888888777558999999999865 89999999999 9999998654322111 1 22234458888877654332
Q ss_pred c--hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 336 P--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 336 ~--~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
. .+.+.++++++.++.+++.. ...++++++.++++.+.++... |+++
T Consensus 280 ~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 280 DRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCccceeC
Confidence 1 24577889999999887653 3568999999999998877655 7763
No 115
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=3.3e-32 Score=257.77 Aligned_cols=312 Identities=22% Similarity=0.259 Sum_probs=255.9
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
|||+.+.+++.+ +.+.+.+.|.+.+++++|+|.++++|+.|+....+..... ..+|.++|||++|+|+.+|+.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~vg~~~~~~ 79 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP-PGASDILGLEVAGEVVAVGEGVSRW 79 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCCCCccceeEEEEEEeCCCCCCC
Confidence 678888876654 6677777777899999999999999999998887754332 1457899999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++... .|+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~ 110 (325)
T TIGR02824 80 KVGDRVCALVA-------------------------------------------------GGGYAEYVAVPAGQVLPVPE 110 (325)
T ss_pred CCCCEEEEccC-------------------------------------------------CCcceeEEEecHHHcEeCCC
Confidence 99999986421 14799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++++++||+++.+...++++++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|.+.++
T Consensus 111 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (325)
T TIGR02824 111 GLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAI 189 (325)
T ss_pred CCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998878899999999999997 9999999999999999 899999999999988889988887
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (390)
+... .++.+.+.++..+ ++|++++++|+.. ....+++++++ |+++.+|....... .++...+ .++.++.+..
T Consensus 190 ~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (325)
T TIGR02824 190 NYRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGST 263 (325)
T ss_pred ecCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEe
Confidence 7655 5677888887776 8999999999865 88899999999 99999986442222 4444444 5688998887
Q ss_pred cCCC-Cc------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGL-KP------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~-~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.... .. ...+.+++++++++.+++. .++.|++++++++++.+.++... |+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 264 LRARPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hhhcchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 5542 11 1234667888888876543 56889999999999998877665 888753
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.4e-32 Score=256.69 Aligned_cols=317 Identities=26% Similarity=0.336 Sum_probs=254.9
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcC
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (390)
||++++.+.+.+ +.+.+.+.|.+.+++++|+|.++++|+.|+....+..... ..+|.++|||++|+|+.+|+++..|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~ 79 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVTGF 79 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCCcC
Confidence 678888876542 7777888888899999999999999999998887754332 1457889999999999999999999
Q ss_pred CCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCC
Q 016363 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (390)
Q Consensus 94 ~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~ 173 (390)
++||+|++.+.. ++.. .|++++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~~-------------------------~~~~-------------------~g~~~~~~~~~~~~~~~~p~ 115 (328)
T cd08268 80 AVGDRVSVIPAA-------------------------DLGQ-------------------YGTYAEYALVPAAAVVKLPD 115 (328)
T ss_pred CCCCEEEecccc-------------------------ccCC-------------------CccceEEEEechHhcEeCCC
Confidence 999999876421 1111 14799999999999999999
Q ss_pred CCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 174 ~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
++++.+++.+++++.+||+++.....+.++++|+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|.+.++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 194 (328)
T cd08268 116 GLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVI 194 (328)
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999999878889999999999998 9999999999999999 899999999999999889988888
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH-hhhcceeEEeee
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTY 330 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~ 330 (390)
+.+. ..+.+.+.+.+.+ ++|++++++++.. ...++++++++ |+++.+|.... ....++.. .+.++..+.+..
T Consensus 195 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (328)
T cd08268 195 VTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYS 268 (328)
T ss_pred ecCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEe
Confidence 7765 6777778877776 8999999999865 88899999999 99999986543 22233333 355588877775
Q ss_pred cCCCC-c----hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 331 FGGLK-P----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 331 ~~~~~-~----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
..... . ...+..+.+++.++.+.+. ....|+++++.++++.+..+... |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 269 LDEITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 44321 1 1234555666777766643 55889999999999998877665 888753
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=5.6e-32 Score=253.86 Aligned_cols=293 Identities=24% Similarity=0.317 Sum_probs=237.7
Q ss_pred cCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCcccc
Q 016363 35 VEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK 114 (390)
Q Consensus 35 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~ 114 (390)
+|++.+++++||+.++++|+.|+....+..+.. ..+|.++|+|++|+|+++|+++++|++||+|++....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTM-PPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE--------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCC-CCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC---------
Confidence 578899999999999999999999988765432 2578899999999999999999999999999875310
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHH
Q 016363 115 SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194 (390)
Q Consensus 115 ~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l 194 (390)
. .|+|++|+.++.+.++++|+++++.+++.+++.+++||+++
T Consensus 72 -------------------~-------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 113 (303)
T cd08251 72 -------------------S-------------------MGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF 113 (303)
T ss_pred -------------------C-------------------CcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence 0 14899999999999999999999999999999999999987
Q ss_pred HHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-
Q 016363 195 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~- 272 (390)
+...+++|++|+|+|+ |.+|++++|+++.+|+ +|+++++++++.+.++++|++.+++... .++.+.+.+++++
T Consensus 114 -~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~ 188 (303)
T cd08251 114 -ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGR 188 (303)
T ss_pred -HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCC
Confidence 6789999999999977 9999999999999999 8999999999999999999999988766 6788888888887
Q ss_pred CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCC---C---chhhHHHHHHH
Q 016363 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL---K---PRSDIATLAQK 346 (390)
Q Consensus 273 g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~---~~~~~~~~~~~ 346 (390)
++|+++|++++.. ....+++++++ |+++.+|.........+....+..+..+....+... . ..+.+.+++++
T Consensus 189 ~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
T cd08251 189 GVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSL 266 (303)
T ss_pred CceEEEECCcHHH-HHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence 9999999998654 88899999999 999999865422222333333444443333222111 0 12456778889
Q ss_pred HHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 347 YLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 347 ~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
+.++.+++. ..+.|+++++.++++.+.++... |+++
T Consensus 267 ~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 267 VEEGELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHCCCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 999976643 55889999999999999877665 7763
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=7.7e-32 Score=253.46 Aligned_cols=302 Identities=21% Similarity=0.282 Sum_probs=242.0
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
||+++++.++.. +.+.+.+.|++++++|+|++.++++|+.|+..+.|... .....+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888887653 56677777888999999999999999999998877542 111146889999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|++.... .. .|+|++|+.++.+.++++|
T Consensus 81 ~~~G~~V~~~~~~---------------------------~~-------------------~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF---------------------------TR-------------------GGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC---------------------------CC-------------------CCcceeEEEecHHHhccCC
Confidence 9999999875420 00 1479999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++..++.+++.+.+||+++.+...+.+|++|+|+|+ |.+|++++++++..|+ +|++++.++ +.+.++++|.+.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999998877777999999999998 9999999999999999 899888777 8888888998888
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (390)
++... .++.+ .+.+ ++|++++++++.. ...++++++++ |+++.+|...... . ..+..+..+....
T Consensus 193 ~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~--~---~~~~~~~~~~~~~ 258 (309)
T cd05289 193 IDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPPAE--Q---AAKRRGVRAGFVF 258 (309)
T ss_pred EeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCcch--h---hhhhccceEEEEE
Confidence 87655 34433 3334 8999999999885 88999999999 9999998543211 1 2223355555554
Q ss_pred cCCCCchhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 331 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
+... .+.+.+++++++++.+++ ++++.|+++++++|++.+..+... |++
T Consensus 259 ~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 259 VEPD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred eccc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 3322 567889999999997653 367899999999999998877654 665
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=3e-31 Score=250.87 Aligned_cols=310 Identities=26% Similarity=0.426 Sum_probs=252.2
Q ss_pred eeEEEeecCCCC--cEEEEeecCCCC-CCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCc
Q 016363 16 CKAAICRIPGKP--LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (390)
Q Consensus 16 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (390)
|+|+++..++.+ +++.+.+ |.+. +++++|++.++++|+.|+..+.|..... ...|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~ 78 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVK-PPLPFVPGSEVAGVVEAVGEGVTG 78 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCC-CCCCCcccceeEEEEEEeCCCCCC
Confidence 688888865443 7777777 6666 5999999999999999999887755322 145678999999999999999999
Q ss_pred CCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcC
Q 016363 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (390)
Q Consensus 93 ~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p 172 (390)
+++||+|++... .|++++|+.++.+.++++|
T Consensus 79 ~~~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip 109 (323)
T cd08241 79 FKVGDRVVALTG-------------------------------------------------QGGFAEEVVVPAAAVFPLP 109 (323)
T ss_pred CCCCCEEEEecC-------------------------------------------------CceeEEEEEcCHHHceeCC
Confidence 999999987531 1479999999999999999
Q ss_pred CCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE
Q 016363 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (390)
Q Consensus 173 ~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v 251 (390)
+++++.+++.++.++.+||+++.+...++++++|+|+|+ |++|++++++|+..|+ +|+++++++++.+.++++|.+.+
T Consensus 110 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (323)
T cd08241 110 DGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHV 188 (323)
T ss_pred CCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCcee
Confidence 999999998898999999998877889999999999998 9999999999999999 89999999999999999998888
Q ss_pred EcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccch-HhhhcceeEEee
Q 016363 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRSVCGT 329 (390)
Q Consensus 252 ~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~ 329 (390)
++... .++.+.+.+.+++ ++|.+++++|+.. ...++++++++ |+++.+|....... .+.. ..+.++.++.+.
T Consensus 189 ~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (323)
T cd08241 189 IDYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGV 262 (323)
T ss_pred eecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEE
Confidence 87665 6788888888877 8999999999855 88899999999 99999986432211 1222 224458888887
Q ss_pred ecCCCCc------hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEe
Q 016363 330 YFGGLKP------RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 385 (390)
Q Consensus 330 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~ 385 (390)
....+.. .+.+.++++++.++.+.+ ..++.|+++++.++++.+.++... |++++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 263 YWGAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ecccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 6544321 245678889999997653 366889999999999998876655 87753
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-30 Score=248.78 Aligned_cols=311 Identities=21% Similarity=0.318 Sum_probs=246.2
Q ss_pred eEEEeecCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCC
Q 016363 17 KAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (390)
Q Consensus 17 ~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (390)
|++++...+. .+.+.+.+.|+|.+++++||+.++++|+.|+..+.|..... ..+|.++|||++|+|+.+|+.+.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~ 79 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-PKPPFVPGFECAGTVEAVGEGVKDFK 79 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCC-CCCCCCCcceeEEEEEEECCCCcCCC
Confidence 4566665543 37777888888899999999999999999999887754322 14677899999999999999999999
Q ss_pred CCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCC
Q 016363 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (390)
Q Consensus 95 vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~ 174 (390)
+||+|++... .|+|++|+.++.+.++++|++
T Consensus 80 ~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~ 110 (337)
T cd08275 80 VGDRVMGLTR-------------------------------------------------FGGYAEVVNVPADQVFPLPDG 110 (337)
T ss_pred CCCEEEEecC-------------------------------------------------CCeeeeEEEecHHHeEECCCC
Confidence 9999987531 147999999999999999999
Q ss_pred CCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEE
Q 016363 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI 252 (390)
Q Consensus 175 ~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~ 252 (390)
+++.+++.+++++++||+++.+..++++|++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.+.++.+|++.++
T Consensus 111 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~ 188 (337)
T cd08275 111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVI 188 (337)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEe
Confidence 9999999999999999999888899999999999998 99999999999998 33 33322 245678888889998888
Q ss_pred cCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCC--c-------------ccch
Q 016363 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP--I-------------SLNS 317 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~-------------~~~~ 317 (390)
+... .++.+.+.+.+++++|+++|++|+.. ...++++++++ |+++.+|....... . .+.+
T Consensus 189 ~~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
T cd08275 189 DYRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDP 263 (337)
T ss_pred eCCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCH
Confidence 8766 67888888877558999999999875 78899999999 99999986542211 1 1111
Q ss_pred Hh-hhcceeEEeeecCCCCc-----hhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEec
Q 016363 318 IE-ILKGRSVCGTYFGGLKP-----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 386 (390)
Q Consensus 318 ~~-~~~~~~i~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~ 386 (390)
.. +.++.++.++.+..... ...+.++++++.++.+.+. .++.|++++++++++.+.++... |+++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 264 MKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 22 34488888876542211 1346778888999976543 56889999999999999877665 988764
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-30 Score=246.11 Aligned_cols=296 Identities=22% Similarity=0.250 Sum_probs=228.5
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCC-CCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCC
Q 016363 29 VIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (390)
Q Consensus 29 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~ 107 (390)
++.+.+.|++++++|+|++.++++|+.|+..+.|..... ....|.++|||++|+|+++|+++++|++||+|++....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 777888899999999999999999999999887754210 01356789999999999999999999999999875421
Q ss_pred CCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccch
Q 016363 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187 (390)
Q Consensus 108 ~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~ 187 (390)
.. .|+|++|+.++.+.++++|+++++.+++.+++++
T Consensus 93 -------------------------~~-------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 -------------------------KG-------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred -------------------------CC-------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 00 1479999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHH
Q 016363 188 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 188 ~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
.+||+++.....+++|++|+|+|+ |++|++++++|+.+|+ +|++++++ ++.+.++++|.+++++... .++.
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~--- 200 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV--- 200 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence 999999877777999999999998 9999999999999999 89998865 8888889999988887655 3443
Q ss_pred HhhcCC-CccEEEEcccChH-HHHHHHHHhccCCceEEEEcccCCCCCccc---chHhhhcceeEEeeecCCCCchhhHH
Q 016363 267 KEMTDG-GADYCFECIGLTS-VMNDAFNSSREGWGKTVILGVEMHGSPISL---NSIEILKGRSVCGTYFGGLKPRSDIA 341 (390)
Q Consensus 267 ~~~~~~-g~D~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~ 341 (390)
...+.+ ++|++++|+++.. .....+..++++ |+++.+|.......... ..........+....... ..+.+.
T Consensus 201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 277 (319)
T cd08267 201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLE 277 (319)
T ss_pred hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHH
Confidence 334455 8999999999532 233344448988 99999986543222211 111112122222222221 257789
Q ss_pred HHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 342 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 342 ~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
+++++++++++++ ++++.|+++++++|++.+.++... |++
T Consensus 278 ~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vv 318 (319)
T cd08267 278 QLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVV 318 (319)
T ss_pred HHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence 9999999997654 367899999999999999876654 665
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=1.3e-30 Score=242.51 Aligned_cols=282 Identities=21% Similarity=0.216 Sum_probs=231.5
Q ss_pred CeEEEEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCC
Q 016363 41 WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120 (390)
Q Consensus 41 ~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~ 120 (390)
+|++||+.++++|++|++...|..+ .+|.++|||++|+|+++|+.++.|++||+|++...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~---------------- 60 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP---------------- 60 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC----CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec----------------
Confidence 5899999999999999999887642 46789999999999999999999999999987531
Q ss_pred CcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCC
Q 016363 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 200 (390)
Q Consensus 121 c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~ 200 (390)
|+|++|+.++.+.++++|+++++.+++.+++++.+||.++.+...+
T Consensus 61 ----------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 106 (293)
T cd05195 61 ----------------------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL 106 (293)
T ss_pred ----------------------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc
Confidence 4899999999999999999999999999999999999998788899
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC--CcEEEcCCCCCCcCHHHHHHhhcCC-CccE
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIKEMTDG-GADY 276 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~ 276 (390)
++|++|+|+|+ |.+|++++++++.+|+ +|+++++++++.+.+++++ ++.+++... .++.+.+.+++.+ ++|+
T Consensus 107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~ 182 (293)
T cd05195 107 QKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDV 182 (293)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceE
Confidence 99999999986 9999999999999999 8999999999999998887 677887665 5788888888877 8999
Q ss_pred EEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCC------chhhHHHHHHHHHcC
Q 016363 277 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK------PRSDIATLAQKYLDK 350 (390)
Q Consensus 277 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~~ 350 (390)
++|++|+.. ...++++++++ |+++.+|.........+....+.++..+....+.... ..+.+.+++++++++
T Consensus 183 vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (293)
T cd05195 183 VLNSLSGEL-LRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAG 260 (293)
T ss_pred EEeCCCchH-HHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCC
Confidence 999999884 89999999999 9999998654322122323333345555554322211 124577888999999
Q ss_pred CCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 351 ELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 351 ~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
++. ...+..++++++.+|++.+.++... |+++
T Consensus 261 ~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 261 VLK--PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred Ccc--cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 765 3456789999999999999877665 7663
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=4.3e-30 Score=238.80 Aligned_cols=276 Identities=21% Similarity=0.264 Sum_probs=226.2
Q ss_pred EEEeeeecccccccccccCCCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCC
Q 016363 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124 (390)
Q Consensus 45 V~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~ 124 (390)
||+.++++|+.|++.+.|..+ .|.++|+|++|+|+++|+.++.|++||+|++...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------- 56 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-------------------- 56 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC--------------------
Confidence 899999999999999877542 3568999999999999999999999999987521
Q ss_pred CCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCC
Q 016363 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 204 (390)
Q Consensus 125 ~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~ 204 (390)
|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.+...+.+|+
T Consensus 57 ------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~ 106 (288)
T smart00829 57 ------------------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGE 106 (288)
T ss_pred ------------------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCC
Confidence 48999999999999999999999999999999999999887888999999
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC--cEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 280 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~--~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~ 280 (390)
+|+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|+ +.++++.+ .++.+.+.+..++ ++|.++|+
T Consensus 107 ~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~ 182 (288)
T smart00829 107 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNS 182 (288)
T ss_pred EEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeC
Confidence 9999996 9999999999999999 89999999999999999998 77887665 6788888888777 89999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCC-----CchhhHHHHHHHHHcCCCCCc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL-----KPRSDIATLAQKYLDKELNLG 355 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 355 (390)
+++.. ....+++++++ |+++.+|.........++...+.++..+.+..+... ...+.+..++++++++++++.
T Consensus 183 ~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T smart00829 183 LAGEF-LDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL 260 (288)
T ss_pred CCHHH-HHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc
Confidence 99654 88899999999 999999864322222333333444666655533211 012356778889999977653
Q ss_pred cceeeeeccccHHHHHHHHhcCCce-EEE
Q 016363 356 EFITHEVSFHDINKAFDLLLEGKSL-RCI 383 (390)
Q Consensus 356 ~~i~~~~~l~~~~~A~~~~~~~~~~-kvv 383 (390)
..+.|++++++++++.+..+... |++
T Consensus 261 --~~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 261 --PVTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred --CceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 44789999999999999877654 765
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.97 E-value=6.3e-28 Score=214.09 Aligned_cols=295 Identities=22% Similarity=0.212 Sum_probs=231.2
Q ss_pred EeecC-CCCCCeEEEEEeeeecccccccccccCCCCCCCCCCcccc----cceeEEEEEeCCCCCcCCCCCEEeeecccC
Q 016363 32 EIEVE-PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFG----HEAVGVVESVGEYVEEVKERDLVLPIFHRD 106 (390)
Q Consensus 32 ~~~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~ 106 (390)
+.+++ ++++++++||.+|.+..|.-...++...+..- --|..+| ..++|+|++.+ .++|++||.|.++.
T Consensus 28 ~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y-~~~~~~G~pi~g~GV~kVi~S~--~~~~~~GD~v~g~~--- 101 (343)
T KOG1196|consen 28 TVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDY-APPYEPGKPIDGFGVAKVIDSG--HPNYKKGDLVWGIV--- 101 (343)
T ss_pred eecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccc-cCcccCCcEecCCceEEEEecC--CCCCCcCceEEEec---
Confidence 33433 57899999999999998876555543333210 1123333 37899999964 47899999998763
Q ss_pred CCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCC--ceEEcC--CCCCcchhhc
Q 016363 107 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT--PHIPLGIACL 182 (390)
Q Consensus 107 ~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~v~~~p--~~~~~~~aa~ 182 (390)
+|.||.+++.. ..+++| .++++....+
T Consensus 102 -------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg 132 (343)
T KOG1196|consen 102 -------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLG 132 (343)
T ss_pred -------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhh
Confidence 69999999764 345554 3566666544
Q ss_pred -cccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCC
Q 016363 183 -LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGD 259 (390)
Q Consensus 183 -~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~ 259 (390)
+.++.+|||..+++.+..+.|++|+|-|| |++|+++.|+|+.+|+ +|++.+.+++|.++++. +|.+..+||.+ +
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e 209 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--E 209 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--c
Confidence 78899999999999999999999999998 9999999999999999 99999999999999976 79999999988 4
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCC-----CCcccchHhhhcceeEEeeecCCC
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-----SPISLNSIEILKGRSVCGTYFGGL 334 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~ 334 (390)
.++.+++++..++|+|+.||.+|+.. +...+..|+.. ||++.||+-+.. ..+.--...+.+.+++.|+....+
T Consensus 210 ~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~ 287 (343)
T KOG1196|consen 210 SDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY 287 (343)
T ss_pred cCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence 58999999988889999999999998 99999999999 999999975421 112222233455788888654443
Q ss_pred C--chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEEecCC
Q 016363 335 K--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 388 (390)
Q Consensus 335 ~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~~ 388 (390)
. ..+.++.+..++++||++...-+ .-.||+.++||.-|.++.+. |.++.+..
T Consensus 288 ~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va~ 342 (343)
T KOG1196|consen 288 LDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVAR 342 (343)
T ss_pred hhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEeec
Confidence 3 24567888999999999877544 33599999999999999987 99988764
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=1.5e-28 Score=247.41 Aligned_cols=295 Identities=16% Similarity=0.137 Sum_probs=250.6
Q ss_pred cEEEEeecC---CCCCCeEEEEEeeeecccccccccccCCCCCCC-----CCCcccccceeEEEEEeCCCCCcCCCCCEE
Q 016363 28 LVIEEIEVE---PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKL-----PLPVIFGHEAVGVVESVGEYVEEVKERDLV 99 (390)
Q Consensus 28 ~~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~-----~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V 99 (390)
+.|.+-|.. +..++.-+.-|-|+.||..|++...|+.+.... +-.+++|-||+|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 666666644 346788899999999999999999998776621 1237889999998 4559999
Q ss_pred eeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEcCCCCCcch
Q 016363 100 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179 (390)
Q Consensus 100 ~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~ 179 (390)
++.... -++++.+.++.++++.+|.+.++++
T Consensus 1499 M~mvpA-------------------------------------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVPA-------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeeeh-------------------------------------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 875431 1799999999999999999999999
Q ss_pred hhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcC
Q 016363 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINP 254 (390)
Q Consensus 180 aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~ 254 (390)
|+++|+.+.|||++|..+.+.++|++|||+++ |++|++|+.+|.+.|+ +|+.++.+++|++++.. +....+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 99999999999999999999999999999955 9999999999999999 99999999999999865 345566777
Q ss_pred CCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCC
Q 016363 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (390)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (390)
.+ .+|.+.+.+-|+| |+|+|+++...+. ++..++||+.. ||+..+|-..-....++.+..|++|.+++|..+..
T Consensus 1609 Rd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDs 1683 (2376)
T KOG1202|consen 1609 RD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDS 1683 (2376)
T ss_pred cc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhh
Confidence 76 8999999999999 9999999999998 99999999999 99999996554556677888889999999985544
Q ss_pred CC--chhhHHHHHHHHHcCCCC--CccceeeeeccccHHHHHHHHhcCCce-EEEEecC
Q 016363 334 LK--PRSDIATLAQKYLDKELN--LGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 387 (390)
Q Consensus 334 ~~--~~~~~~~~~~~~~~~~~~--~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl~~~ 387 (390)
.- +.+++.++..++++|.-+ ..++.+++|+-.++++||++|.+++++ |+|+++-
T Consensus 1684 vmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1684 VMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred hhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 32 246778888998887444 567788999999999999999999997 9999864
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=2e-27 Score=220.93 Aligned_cols=245 Identities=27% Similarity=0.390 Sum_probs=196.4
Q ss_pred CCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceee
Q 016363 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH 149 (390)
Q Consensus 70 ~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 149 (390)
++|.++|+|++|+|+++|+++++|++||+|+..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 588999999999999999999999999999864
Q ss_pred ccccccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 016363 150 HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 229 (390)
Q Consensus 150 ~~~~~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~ 229 (390)
+.|++|+.++.+.++++|+++++.+++.+ +++.|||+++ ...++++|++|||+|+|++|++++++|+.+|+++
T Consensus 52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 25899999999999999999999999888 7899999987 5789999999999988999999999999999934
Q ss_pred EEEecCChhhHHHHHhcC-CcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 230 IIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 230 Vi~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
|+++++++++.++++++| ++.+++... ..+.+ ++|++||+++........+++++++ |+++.+|..
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~ 192 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWY 192 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEecc
Confidence 999999999999999998 555544322 11234 8999999999777688999999999 999999865
Q ss_pred CCCCCcccchHhhhc-ceeEEeeecCCCC---------chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcC
Q 016363 308 MHGSPISLNSIEILK-GRSVCGTYFGGLK---------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 377 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~i~g~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~ 377 (390)
... .... ...+.. ..++.+....... ..+.++++++++.+++++.. +.+.|+++++++|++.+.++
T Consensus 193 ~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~ 268 (277)
T cd08255 193 GLK-PLLL-GEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAYRLLFED 268 (277)
T ss_pred CCC-cccc-HHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHHHHHHcC
Confidence 433 1111 122332 4466665443211 12568899999999976543 56889999999999999877
Q ss_pred --CceEEEE
Q 016363 378 --KSLRCII 384 (390)
Q Consensus 378 --~~~kvvl 384 (390)
...|+++
T Consensus 269 ~~~~~k~~~ 277 (277)
T cd08255 269 PPECLKVVL 277 (277)
T ss_pred CccceeeeC
Confidence 3348764
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.88 E-value=9e-23 Score=162.45 Aligned_cols=108 Identities=34% Similarity=0.596 Sum_probs=93.4
Q ss_pred CCeEEEEEeeeecccccccccccC-CCCCCCCCCcccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCC
Q 016363 40 AWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKS 118 (390)
Q Consensus 40 ~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~ 118 (390)
|+||||||+++|||++|++++.|. .... .+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+.+
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPP--KFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTS--SSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCC--CCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 789999999999999999999994 3333 7999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCCCCCCCCCCCCcccccccCceeeccccccccceeEEeeCCceEEc
Q 016363 119 NTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (390)
Q Consensus 119 ~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~v~~~ 171 (390)
+.|.+... +|+..+| +|+||+++++++++++
T Consensus 79 ~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred ccCCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence 99977554 4554554 8999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.73 E-value=6.6e-17 Score=132.75 Aligned_cols=128 Identities=30% Similarity=0.517 Sum_probs=113.8
Q ss_pred hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHH
Q 016363 213 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAF 291 (390)
Q Consensus 213 ~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~ 291 (390)
++|++++|+|+.+|+ +|++++++++|++.++++|+++++++++ .++.+.+++++++ ++|+||||+|....++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999996 9999999999999999999999999988 7799999999998 9999999999878799999
Q ss_pred HHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecCCCCchhhHHHHHHHHHc
Q 016363 292 NSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLD 349 (390)
Q Consensus 292 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~ 349 (390)
++++++ |+++.+|... ....+++...+.. ++++.|+..+. .++++++++++.+
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 999999 9999999776 4456666666655 99999997666 6789999988864
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.45 E-value=2.3e-12 Score=124.27 Aligned_cols=177 Identities=15% Similarity=0.193 Sum_probs=137.3
Q ss_pred HHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 190 GVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 190 A~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
.+.++.+..+ ..+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+. ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~---------~~e~v-- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT---------MEEAV-- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc---------HHHHH--
Confidence 3455545544 4789999999999999999999999999 899999999999999999984331 22222
Q ss_pred hcCCCccEEEEcccChHHHHHH-HHHhccCCceEEEEcccCCCCCcccchHhhhc-ceeEEeeecCCCCchhhHH--HHH
Q 016363 269 MTDGGADYCFECIGLTSVMNDA-FNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA--TLA 344 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~--~~~ 344 (390)
.++|+||+|+|....+... +..++++ |+++.+|.. ..+++...+.. .+++.+++.... ..+++ +.+
T Consensus 256 ---~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI 325 (413)
T cd00401 256 ---KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRI 325 (413)
T ss_pred ---cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchh
Confidence 2689999999998877765 9999998 999999943 23455555555 788888864431 11345 789
Q ss_pred HHHHcCCC-CCccceeee-----eccc-cHHHHHHHHhcCCce--EEEEecCC
Q 016363 345 QKYLDKEL-NLGEFITHE-----VSFH-DINKAFDLLLEGKSL--RCIIWMDK 388 (390)
Q Consensus 345 ~~~~~~~~-~~~~~i~~~-----~~l~-~~~~A~~~~~~~~~~--kvvl~~~~ 388 (390)
+++.+|++ ++...+++. ++|+ ++.+++..+.+.... |+++.+++
T Consensus 326 ~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~ 378 (413)
T cd00401 326 ILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK 378 (413)
T ss_pred hhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence 99999999 888888888 8899 999999999876643 88877654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.29 E-value=5.9e-11 Score=117.43 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=113.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCC----------CcCHHHHHHh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCG----------DKTVSQVIKE 268 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~----------~~~~~~~i~~ 268 (390)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 89999999999999999999854 5543200 0133333333
Q ss_pred h-cC--CCccEEEEcccCh-----HH-HHHHHHHhccCCceEEEEcccCCCC-CcccchHhhh--cceeEEeeecCCCCc
Q 016363 269 M-TD--GGADYCFECIGLT-----SV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEIL--KGRSVCGTYFGGLKP 336 (390)
Q Consensus 269 ~-~~--~g~D~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~--~~~~i~g~~~~~~~~ 336 (390)
. .+ +++|+||+|++.+ .. .+.+++.++++ |+++++|...+.. ..+.+...+. +++++.|.....
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P--- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLP--- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCc---
Confidence 3 33 2799999999963 24 38999999999 9999999753221 2333333333 588999875322
Q ss_pred hhhHHHHHHHHHcCCCCCcccee
Q 016363 337 RSDIATLAQKYLDKELNLGEFIT 359 (390)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~i~ 359 (390)
.+...++.+++.++.+++..+++
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 23334689999999887766664
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.24 E-value=6.5e-12 Score=102.54 Aligned_cols=119 Identities=21% Similarity=0.334 Sum_probs=77.5
Q ss_pred cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc--ChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhh-hc
Q 016363 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG--LTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LK 322 (390)
Q Consensus 246 ~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~ 322 (390)
||+++++|+++ .++ ...+++|+|||++| +...+..++++| ++ |+++.++. ....... ..
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 68999999877 555 22349999999999 555346667777 88 99998883 1111111 22
Q ss_pred ceeEEeeecCC-CC---chhhHHHHHHHHHcCCCCCccceeeeeccccHHHHHHHHhcCCce-EEEE
Q 016363 323 GRSVCGTYFGG-LK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 384 (390)
Q Consensus 323 ~~~i~g~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-kvvl 384 (390)
...+....+.. .. ..+.++++++++++|++++. ++++|||+++.+|++.++++... |+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 33333333332 11 23559999999999987765 88999999999999999998876 9986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.58 E-value=4.3e-07 Score=84.20 Aligned_cols=163 Identities=21% Similarity=0.279 Sum_probs=101.1
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.+++|++||.+|+|. |..+.++++..+.. +|++++.+++.++.+++ ++.+.+-... .++.+ + .+.+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~----~d~~~-l-~~~~ 144 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL----GEIEA-L-PVAD 144 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE----cchhh-C-CCCC
Confidence 46789999999999987 88888888887753 79999999999888875 3332221111 12211 1 1223
Q ss_pred CCccEEEEcc------cChHHHHHHHHHhccCCceEEEEcccCCCCCcccchHhhhcceeEEeeecCCCCchhhHHHHHH
Q 016363 272 GGADYCFECI------GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQ 345 (390)
Q Consensus 272 ~g~D~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 345 (390)
+.+|+|+... .....++.+.+.|+++ |+++..+..... +++ ..+.....+.+...... ....++.+
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~---~~~-~~~~~~~~~~~~~~~~~---~~~~e~~~ 216 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG---ELP-EEIRNDAELYAGCVAGA---LQEEEYLA 216 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC---CCC-HHHHHhHHHHhccccCC---CCHHHHHH
Confidence 3799998543 2234588999999999 999987654322 111 11222222222222221 23445666
Q ss_pred HHHc-CCCCCccceeeeeccccHHHHHHHH
Q 016363 346 KYLD-KELNLGEFITHEVSFHDINKAFDLL 374 (390)
Q Consensus 346 ~~~~-~~~~~~~~i~~~~~l~~~~~A~~~~ 374 (390)
++++ |-..........++++++.++++.+
T Consensus 217 ~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 217 MLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 6666 4333443355678899999999988
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.45 E-value=1.7e-06 Score=85.76 Aligned_cols=127 Identities=20% Similarity=0.192 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCC----------CcCHHHHHHhh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCG----------DKTVSQVIKEM 269 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~----------~~~~~~~i~~~ 269 (390)
.++++|+|+|+|.+|++++++++.+|+ +|+++++++++++.++.+|++.+. +..+.+ ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 899999999999999999987633 321100 11333333443
Q ss_pred cC---CCccEEEEcc---cChH---HHHHHHHHhccCCceEEEEcccCCCCCcccc-hHh-hh-c-ceeEEeee
Q 016363 270 TD---GGADYCFECI---GLTS---VMNDAFNSSREGWGKTVILGVEMHGSPISLN-SIE-IL-K-GRSVCGTY 330 (390)
Q Consensus 270 ~~---~g~D~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~-~~-~-~~~i~g~~ 330 (390)
.. .++|+||+|+ |.+. ..+..++.++++ +.+++++...+. .+.+. +.. +. . ++++.|..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence 33 2799999999 5433 457889999999 999999865543 22222 111 22 2 47777764
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.31 E-value=4.1e-08 Score=96.28 Aligned_cols=160 Identities=18% Similarity=0.203 Sum_probs=107.7
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccc
Q 016363 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 153 (390)
.-|.|+++.+.+|++++++ +|++.+.+ ||-|.+| ++.|.+... .|...+
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~------------------ 137 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLE------------------ 137 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHH------------------
Confidence 3589999999999998876 77777777 8999998 555655443 222222
Q ss_pred ccccceeEEeeCCceEE---c-CCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 016363 154 ISSFTEYSVVDITHVVK---I-TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 229 (390)
Q Consensus 154 ~g~~a~~~~v~~~~v~~---~-p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~ 229 (390)
+.|++++.++. .+.. + +..+|...+ |.....+..+..++++|+|+|+|.+|..+++.++..|+.+
T Consensus 138 -~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~---------Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 138 -RLFQKAFSVGK-RVRTETDISAGAVSISSA---------AVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred -HHHHHHHHHhh-hhhhhcCCCCCCcCHHHH---------HHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 37999988876 3332 3 222222211 1111223445577899999999999999999999999669
Q ss_pred EEEecCChhhHH-HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHH
Q 016363 230 IIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV 286 (390)
Q Consensus 230 Vi~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~ 286 (390)
|+++.++.++.+ +++.+|.. .+.. .++.+.+. ++|+||+|++.+..
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l~-----~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYLA-----EADIVISSTGAPHP 253 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHHh-----hCCEEEECCCCCCc
Confidence 999999988855 55667753 2221 12222222 69999999987653
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.26 E-value=1.6e-05 Score=77.46 Aligned_cols=103 Identities=18% Similarity=0.229 Sum_probs=79.3
Q ss_pred HHHHHHHHhCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 190 GVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 190 A~~~l~~~~~~~-~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
+|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|.+ +. ++.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal-- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA-- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH--
Confidence 455554443554 89999999999999999999999999 999999999887666666654 22 222222
Q ss_pred hcCCCccEEEEcccChHHHH-HHHHHhccCCceEEEEcccC
Q 016363 269 MTDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 308 (390)
.++|+||+++|....+. ..+..++++ +.++..|...
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 26999999999887665 688889988 8888888543
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.18 E-value=2.8e-05 Score=75.30 Aligned_cols=102 Identities=20% Similarity=0.288 Sum_probs=78.5
Q ss_pred HHHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHh
Q 016363 190 GVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 190 A~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~ 268 (390)
++.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +. ++.+.+
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~--------~leeal-- 248 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VM--------TMEEAA-- 248 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC--------CHHHHH--
Confidence 3444444434 4789999999999999999999999999 899999998887777666752 22 122222
Q ss_pred hcCCCccEEEEcccChHHHHH-HHHHhccCCceEEEEccc
Q 016363 269 MTDGGADYCFECIGLTSVMND-AFNSSREGWGKTVILGVE 307 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~~~~~~-~~~~l~~~~G~~v~~g~~ 307 (390)
.+.|+||+++|+...+.. .+..++++ +.++.+|..
T Consensus 249 ---~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 ---KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred ---hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 258999999999887764 88899988 899888854
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.14 E-value=4.1e-05 Score=71.69 Aligned_cols=96 Identities=17% Similarity=0.279 Sum_probs=75.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.+.+|+|+|.|.+|+.+++.++.+|+ +|++.++++++.+.++.+|.+.+ .. .++.+.+ .++|+||+++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~~~l-----~~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELAEEV-----GKIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHHHHh-----CCCCEEEECC
Confidence 68999999999999999999999999 99999999998888888886532 11 1222222 2699999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCCC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMHG 310 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 310 (390)
+........++.++++ +.+++++.....
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pgg 246 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGG 246 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence 8765456778889988 999999865433
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.03 E-value=1.7e-05 Score=74.96 Aligned_cols=109 Identities=17% Similarity=0.183 Sum_probs=79.7
Q ss_pred CceEEcCCCCCcchhhccccchhhHHHHHHHHhC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhH-H
Q 016363 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-E 241 (390)
Q Consensus 166 ~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~---~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~-~ 241 (390)
...+++|+.+..+.++... +..+++.++..... -.++.+|+|+|+|.+|..+++.++..|..+|+++++++++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 3567778888888887765 56677776533222 24799999999999999999999988877899999998875 5
Q ss_pred HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHH
Q 016363 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV 286 (390)
Q Consensus 242 ~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~ 286 (390)
+++++|.. +++.+ ++.+.+. .+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~~-----~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPLD-----ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeHH-----HHHHHHh-----cCCEEEECCCCCch
Confidence 66778873 33221 2333332 58999999998874
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.01 E-value=6.5e-05 Score=73.51 Aligned_cols=101 Identities=20% Similarity=0.255 Sum_probs=79.7
Q ss_pred HHHHHHHhCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..++ -.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|...+ ++.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv---------~leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL---------TLEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec---------cHHHHHh--
Confidence 4555555554 679999999999999999999999999 89999999888766766666421 2333332
Q ss_pred cCCCccEEEEcccChHHH-HHHHHHhccCCceEEEEccc
Q 016363 270 TDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 307 (390)
.+|+|+++.|+...+ ...++.|+++ +.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 589999999987744 7899999998 999999854
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.95 E-value=0.00021 Score=65.41 Aligned_cols=127 Identities=22% Similarity=0.323 Sum_probs=82.6
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
+|.+|.. +...++.+++++++..+. .+. |.. ++... ..+.++++||-+|+|. |..++.+++ .|+.+|++++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~t---t~~-~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD 149 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPT---TRL-CLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD 149 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHH---HHH-HHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence 4666644 677889999988877654 221 111 22222 2257899999999986 877776554 6775799999
Q ss_pred CChhhHHHHHhc----CCcEEEcCCCCCCcCHHHHHHhhcCC--CccEEEEcccChH---HHHHHHHHhccCCceEEEEc
Q 016363 235 INPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMTDG--GADYCFECIGLTS---VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 235 ~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g 305 (390)
.++...+.+++. +....+. ...+ .+|+|+....... .+..+.+.|+++ |.++..|
T Consensus 150 is~~~l~~A~~n~~~~~~~~~~~---------------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsg 213 (250)
T PRK00517 150 IDPQAVEAARENAELNGVELNVY---------------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSG 213 (250)
T ss_pred CCHHHHHHHHHHHHHcCCCceEE---------------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 999988877652 2211010 1111 5999987655432 245678889999 9999876
Q ss_pred c
Q 016363 306 V 306 (390)
Q Consensus 306 ~ 306 (390)
.
T Consensus 214 i 214 (250)
T PRK00517 214 I 214 (250)
T ss_pred C
Confidence 4
No 141
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.75 E-value=0.00037 Score=64.91 Aligned_cols=94 Identities=15% Similarity=0.225 Sum_probs=70.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|++|+|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ .. .++.+.+ ..+|+|++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~-----~~l~~~l-----~~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL-----NKLEEKV-----AEIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH-----HHHHHHh-----ccCCEEEECC
Confidence 57899999999999999999999999 99999999988777776664321 11 1222222 2699999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+........++.++++ ..++.++...
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 8655335577788887 8888888543
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.69 E-value=0.00036 Score=67.48 Aligned_cols=99 Identities=20% Similarity=0.196 Sum_probs=69.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++........+ ..++.+.+ ..+|+||++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l-----~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV-----KRADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH-----ccCCEEEEc
Confidence 34569999999999999999999999 89999999988877754 55432222221 01222222 269999999
Q ss_pred cc---C--hH-HHHHHHHHhccCCceEEEEcccCC
Q 016363 281 IG---L--TS-VMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 281 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
++ . +. .....++.++++ +.++.++...+
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 83 2 11 136777889988 99999986543
No 143
>PRK08324 short chain dehydrogenase; Validated
Probab=97.68 E-value=0.00024 Score=74.54 Aligned_cols=137 Identities=20% Similarity=0.241 Sum_probs=88.2
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
++.+|..+++..++.+ +.++++++..... ......+|+++||+|+ |++|.++++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5778888887777777 5666666642110 0122346899999997 9999999999999999 999999
Q ss_pred CChhhHHHHHh-cCC--c-EE--EcCCCCCCcCHHHHHHhhc--CCCccEEEEcccCh----------------------
Q 016363 235 INPEKFEIGKK-FGI--T-DF--INPATCGDKTVSQVIKEMT--DGGADYCFECIGLT---------------------- 284 (390)
Q Consensus 235 ~~~~~~~~~~~-~g~--~-~v--~~~~~~~~~~~~~~i~~~~--~~g~D~vid~~g~~---------------------- 284 (390)
+++++.+.+.. ++. . .. .|..+ ...+.+.+.+.. .+++|++|+++|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99887665533 432 1 12 23222 122333333332 23799999999831
Q ss_pred ---HHHHHHHHHhcc---CCceEEEEccc
Q 016363 285 ---SVMNDAFNSSRE---GWGKTVILGVE 307 (390)
Q Consensus 285 ---~~~~~~~~~l~~---~~G~~v~~g~~ 307 (390)
...+.+++.++. + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 123445566665 4 889988854
No 144
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.68 E-value=0.00051 Score=67.53 Aligned_cols=100 Identities=19% Similarity=0.283 Sum_probs=75.9
Q ss_pred HHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhc
Q 016363 192 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 192 ~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~ 270 (390)
.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. . ++.+.++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell~--- 308 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVVE--- 308 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHHh---
Confidence 34434333 4579999999999999999999999999 8999988877765555556432 1 2333332
Q ss_pred CCCccEEEEcccChHHHH-HHHHHhccCCceEEEEccc
Q 016363 271 DGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 271 ~~g~D~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 307 (390)
.+|+|+.++|+...+. ..+..|+++ +.++.+|..
T Consensus 309 --~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 309 --TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred --cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 6899999999877564 799999998 999999854
No 145
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.65 E-value=0.0025 Score=59.38 Aligned_cols=139 Identities=9% Similarity=0.051 Sum_probs=90.1
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhC---CCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGL-GAVGLAVAEGAR-LNRASKI 230 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~---~~~g~~VlI~Ga-g~vG~~ai~la~-~~g~~~V 230 (390)
.|-+|.++..+..+.- +....++..-| -+.|.|. |.+-.. .-..+.|+|.+| +-+++..+.+++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4677777766554411 22223333344 3666664 333322 334467788888 888988888888 5555599
Q ss_pred EEecCChhhHHHHHhcC-CcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 231 IGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 231 i~~~~~~~~~~~~~~~g-~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
|+++ |+....+.+.+| .+.++.|++ |.++.....-+++|..|+......+...+...=-..+.+|...
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 9999 666677888898 467887765 4444344566788999999877777777776413466777543
No 146
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.60 E-value=0.00011 Score=75.34 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC---------------------hhhHHHHHhcCCcEEEcCCCC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---------------------PEKFEIGKKFGITDFINPATC 257 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~---------------------~~~~~~~~~~g~~~v~~~~~~ 257 (390)
+.++|++|+|+|+|++|+++++.++..|+ +|++++.. ..+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 89988853 345677788998877664320
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChH
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
.+... +.+ ..++|+||+++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 01111 111 127999999999764
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.56 E-value=0.00077 Score=58.87 Aligned_cols=109 Identities=18% Similarity=0.220 Sum_probs=78.0
Q ss_pred cccchhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh----HHHHHhcCCcEE-EcCCCC
Q 016363 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK----FEIGKKFGITDF-INPATC 257 (390)
Q Consensus 183 ~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~----~~~~~~~g~~~v-~~~~~~ 257 (390)
+..+...|. +.+...+++|++||-+|+| .|..++-+|+..+ +|+.+.+.++= .+.++.+|.+.| +...|
T Consensus 55 is~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD- 128 (209)
T COG2518 55 ISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD- 128 (209)
T ss_pred ecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC-
Confidence 333444444 3488999999999999985 5899999999888 79999988773 334566786433 22222
Q ss_pred CCcCHHHHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 258 GDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.. .+... .||.|+-+.+.+..-...++.|+++ |+++.--
T Consensus 129 G~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~Pv 169 (209)
T COG2518 129 GSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPV 169 (209)
T ss_pred ccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEE
Confidence 112 23333 8999998888777568899999999 8876554
No 148
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.52 E-value=0.00047 Score=61.34 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=60.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCC--c--EEEcCCCCCCcCHHHHHHhhcCC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI--T--DFINPATCGDKTVSQVIKEMTDG--G 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~--~--~v~~~~~~~~~~~~~~i~~~~~~--g 273 (390)
+++.++|+|| +++|.+.++.+...|+ +|+.+.|+.++++.+. +++. - ..+|-.+ ..+..+.+..+... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4578999999 9999999999999999 9999999999998774 4773 1 2233332 23455566666655 6
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+.++..|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999885
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.47 E-value=0.00043 Score=56.93 Aligned_cols=97 Identities=21% Similarity=0.217 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc--EEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
--++.+++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+. .++.. .++.+++ +.+.+. .+|+
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Di 78 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADI 78 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESE
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCe
Confidence 346899999999999999999999999978999999999877664 45322 2344332 322222 6999
Q ss_pred EEEcccChHH--HHHHHHHhccCCceEEEEcc
Q 016363 277 CFECIGLTSV--MNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 277 vid~~g~~~~--~~~~~~~l~~~~G~~v~~g~ 306 (390)
||+|++.+.. ....+......-+.++.++.
T Consensus 79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 79 VINATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred EEEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 9999987652 12222222221036777764
No 150
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.47 E-value=0.0016 Score=58.71 Aligned_cols=104 Identities=22% Similarity=0.261 Sum_probs=67.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc---CCcEEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GITDFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~---g~~~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. .+ +..+.+..+-.+...+.+.+.+... +++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999998 9999999999999999 9999999988776552 22 2223332221111233333333221 368
Q ss_pred cEEEEcccChH-----------------------HHHHHHHHhccCCceEEEEccc
Q 016363 275 DYCFECIGLTS-----------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 275 D~vid~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
|.++.+.+... ..+..++.++++ |+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 99998887421 134455666667 889888854
No 151
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.45 E-value=0.00055 Score=67.56 Aligned_cols=160 Identities=18% Similarity=0.153 Sum_probs=96.6
Q ss_pred ccccceeEEEEEeCCCCCcCCCCCEEeeecccCCCCCccccCCCCCCCcCCCCCCCCCCCCCCCcccccccCceeecccc
Q 016363 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (390)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 153 (390)
.-|+|+++.+.+|++++++.-+|+ +.+ ||-|+ ..++.|.+.+. .|...+
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk----~a~~~a~~~g~---~g~~l~------------------ 139 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVK----DAYALAQEAGT---VGTILN------------------ 139 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHH----HHHHHHHHcCC---chHHHH------------------
Confidence 359999999999999988744444 333 33332 22222332221 111111
Q ss_pred ccccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeE
Q 016363 154 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGLGAVGLAVAEGARLNRASKI 230 (390)
Q Consensus 154 ~g~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~---~~~g~~VlI~Gag~vG~~ai~la~~~g~~~V 230 (390)
+.|++.+.++ ..+..+.+. ...+.++++.++..... -.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus 140 -~lf~~a~~~~--------k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 140 -RLFQKAFSVA--------KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred -HHHHHHHHHH--------hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 2455544444 222222221 12245556666533222 3678999999999999999999999998789
Q ss_pred EEecCChhhHH-HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH
Q 016363 231 IGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 231 i~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
+++.+++++.+ ++..+|.+ ++... ++.+.+ .++|+||+|++.+.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPLD-----ELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHh-----ccCCEEEECCCCCC
Confidence 99999988865 56667753 33221 222222 26999999999765
No 152
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.44 E-value=0.0027 Score=57.89 Aligned_cols=80 Identities=19% Similarity=0.248 Sum_probs=57.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCcE-EE--cCCCCCCcCHHHHHHh-hc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITD-FI--NPATCGDKTVSQVIKE-MT 270 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~~-v~--~~~~~~~~~~~~~i~~-~~ 270 (390)
..+.++||+|| +++|...+..+...|. +|+.++|+++|++.+.+ + +... ++ |..+ .+-.+.+.+ +.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~---~~~~~~l~~~l~ 79 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSD---PEALERLEDELK 79 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCC---hhHHHHHHHHHH
Confidence 46789999999 9999999999999999 99999999999876643 2 3322 22 2222 333333332 32
Q ss_pred CC--CccEEEEcccCh
Q 016363 271 DG--GADYCFECIGLT 284 (390)
Q Consensus 271 ~~--g~D~vid~~g~~ 284 (390)
.. .+|+.++++|..
T Consensus 80 ~~~~~IdvLVNNAG~g 95 (265)
T COG0300 80 ERGGPIDVLVNNAGFG 95 (265)
T ss_pred hcCCcccEEEECCCcC
Confidence 22 799999999963
No 153
>PRK06182 short chain dehydrogenase; Validated
Probab=97.34 E-value=0.0018 Score=59.80 Aligned_cols=79 Identities=14% Similarity=0.259 Sum_probs=55.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhc--CCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~--~~g~D~v 277 (390)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ ..++.+.+.+.. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 4678999998 9999999999888999 99999999888776655454332 23322 223333444332 2379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999884
No 154
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.31 E-value=0.0018 Score=60.46 Aligned_cols=96 Identities=20% Similarity=0.275 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc----CCc-EEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +.. .+..... + ......+++
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f 226 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA 226 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence 56789999999977 777766665 5666999999999887776542 221 1111111 1 111223489
Q ss_pred cEEEEcccChH---HHHHHHHHhccCCceEEEEcc
Q 016363 275 DYCFECIGLTS---VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 275 D~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~ 306 (390)
|+|+....... .+..+.+.|+++ |.++..|.
T Consensus 227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi 260 (288)
T TIGR00406 227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGI 260 (288)
T ss_pred eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence 99996554332 345677899998 99987764
No 155
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0025 Score=58.93 Aligned_cols=77 Identities=19% Similarity=0.305 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccEEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~vid 279 (390)
.++||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ ...+.+.+..... +++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899998 9999999999988999 99999999888777665554433 33332 1233333433322 37999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9983
No 156
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.20 E-value=0.0045 Score=56.98 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=74.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-E--EcCCCCCCcCHHHHHHhhc--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--INPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~--~ 271 (390)
.|.+|+|+|| +++|.+++.-....|+ +++.+++..++++.+ ++.++.. + +.-+-.+..+..+.+.+.. -
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5789999999 9999998888888999 888888888877766 3334322 2 2111111233344443322 2
Q ss_pred CCccEEEEcccChH-------------------------HHHHHHHHhccCC-ceEEEEcccCCCCCccc
Q 016363 272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGW-GKTVILGVEMHGSPISL 315 (390)
Q Consensus 272 ~g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~ 315 (390)
|++|+.++..|-.. ....++..|++.+ |+|+.++.-.+....++
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 38999999888532 2456777887765 99999986554433333
No 157
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.17 E-value=0.004 Score=53.66 Aligned_cols=94 Identities=19% Similarity=0.231 Sum_probs=64.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC-
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL- 283 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~- 283 (390)
|+|+|+ |.+|...++.+...|. +|++++|++++.+. ..+.+.+. .+- .+. +.+.+... ++|+||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d~---~d~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GDL---FDP-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-eee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence 789999 9999999999999998 99999999998877 33444332 222 122 33333333 79999999984
Q ss_pred ---hHHHHHHHHHhccCC-ceEEEEcccC
Q 016363 284 ---TSVMNDAFNSSREGW-GKTVILGVEM 308 (390)
Q Consensus 284 ---~~~~~~~~~~l~~~~-G~~v~~g~~~ 308 (390)
.......++.++..+ .+++.++...
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccccceeeeccc
Confidence 222555666665541 3677766443
No 158
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.13 E-value=0.0074 Score=53.05 Aligned_cols=101 Identities=19% Similarity=0.358 Sum_probs=69.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHH----hcC-CcEEEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFG-ITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~~g-~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
...++.++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++ .++ .+.+..... +..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~----d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG----EAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe----chhhhHhhc
Confidence 456889999999999987 8888899887642 38999999998877654 355 232221111 222223222
Q ss_pred cCCCccEEEEcccC---hHHHHHHHHHhccCCceEEE
Q 016363 270 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 270 ~~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~ 303 (390)
.+.+|.||...+. ...++.+.+.|+++ |+++.
T Consensus 109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~ 143 (198)
T PRK00377 109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVI 143 (198)
T ss_pred -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEE
Confidence 2379999985543 23467788899998 99874
No 159
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.08 E-value=0.0062 Score=57.57 Aligned_cols=101 Identities=24% Similarity=0.346 Sum_probs=71.4
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ ..|.+.+..... +..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g----D~~~~~~~- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG----DGYYGVPE- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC----Chhhcccc-
Confidence 356778999999999997 59999999998763 36999999998766554 356553332221 22222211
Q ss_pred cCCCccEEEEcccChHHHHHHHHHhccCCceEEE
Q 016363 270 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~ 303 (390)
.+.+|+|+.+.+........++.|+++ |+++.
T Consensus 147 -~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv 178 (322)
T PRK13943 147 -FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV 178 (322)
T ss_pred -cCCccEEEECCchHHhHHHHHHhcCCC-CEEEE
Confidence 137999999888766566788999998 98765
No 160
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.08 E-value=0.0036 Score=54.35 Aligned_cols=81 Identities=22% Similarity=0.235 Sum_probs=59.3
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEEcCCCC-CCcCHHHHHHhhcCCCccE
Q 016363 202 VGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATC-GDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga--g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~~~~~~-~~~~~~~~i~~~~~~g~D~ 276 (390)
....|||+|+ |++|.+.+.=....|+ .|+++.|+-+..+.+. ++|.. .=+|-.+. .-..+...+++.+.|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4567999985 9999999988889999 9999999999988776 56632 22333220 0113556677777779999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
.++..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9997774
No 161
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.07 E-value=0.004 Score=53.76 Aligned_cols=89 Identities=26% Similarity=0.374 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
-.|.+|.|+|.|.+|...+++++.+|+ +|++.+++..........+... .++.+.+. ..|+|+.+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~---------~~l~ell~-----~aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY---------VSLDELLA-----QADIVSLH 98 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE---------SSHHHHHH-----H-SEEEE-
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee---------eehhhhcc-----hhhhhhhh
Confidence 368999999999999999999999999 9999999988776455544311 24555554 37999887
Q ss_pred ccChH-----HHHHHHHHhccCCceEEEEc
Q 016363 281 IGLTS-----VMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 281 ~g~~~-----~~~~~~~~l~~~~G~~v~~g 305 (390)
.+... .-...+..|+++ ..+|.++
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~a 127 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVA 127 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESS
T ss_pred hccccccceeeeeeeeeccccc-eEEEecc
Confidence 77322 124678888887 7787776
No 162
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.06 E-value=0.0075 Score=58.03 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=68.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC---Cc-EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---IT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g---~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+|||+|+|.+|+.+++.+.+.+-.+|++.+|+.++.+.+.... .+ ..+|-.+ .+.+.+.|+ ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li~-----~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALIK-----DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHHh-----cCCEEEE
Confidence 47999999999999999988888449999999999998886653 22 3344333 122333332 4699999
Q ss_pred cccChHHHHHHHHHhccCCceEEEEccc
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+.+.....+.+-.|++.+ =.++.....
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 999888666666677765 566666543
No 163
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.05 E-value=0.0034 Score=54.28 Aligned_cols=78 Identities=19% Similarity=0.230 Sum_probs=57.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC---cEEEcCCCCCCcC-HHHHHHhhcCC--Cc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI---TDFINPATCGDKT-VSQVIKEMTDG--GA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~-~~~~i~~~~~~--g~ 274 (390)
.|-+|||+|+ +++|++.++-...+|- +||...|++++++.++..-+ ..+.|-.+ .+ ..+.+.++.+. ..
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCCch
Confidence 4789999976 9999999999999998 99999999999999876432 23444433 23 23333333333 68
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
++++++.|-
T Consensus 80 NvliNNAGI 88 (245)
T COG3967 80 NVLINNAGI 88 (245)
T ss_pred heeeecccc
Confidence 899998884
No 164
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.04 E-value=0.005 Score=59.85 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=73.5
Q ss_pred hhhHHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHH
Q 016363 187 VSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 187 ~~tA~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
-...+..+.+..++++|++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++.....-+.... .++.
T Consensus 152 q~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~~--- 223 (383)
T PRK11705 152 QEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDYR--- 223 (383)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cchh---
Confidence 33444455677889999999999985 56777888888898 9999999999998887643211111111 1221
Q ss_pred HhhcCCCccEEEEc-----ccC---hHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 305 (390)
++ .+.+|.|+.. +|. ...++.+.+.|+++ |.++...
T Consensus 224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 12 3479998743 343 23467888899999 9988754
No 165
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0044 Score=57.39 Aligned_cols=79 Identities=14% Similarity=0.246 Sum_probs=56.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhh---cCCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEM---TDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~---~~~g~D~ 276 (390)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+...+.+.+ .|..+ ..++.+.+.+. ..+.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 4678999998 9999999999888999 99999999988887766554433 23322 12233333332 3347999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++++.|.
T Consensus 80 li~~Ag~ 86 (277)
T PRK05993 80 LFNNGAY 86 (277)
T ss_pred EEECCCc
Confidence 9998763
No 166
>PRK04148 hypothetical protein; Provisional
Probab=97.02 E-value=0.0036 Score=50.88 Aligned_cols=90 Identities=17% Similarity=0.219 Sum_probs=62.2
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
....++.+++++|.| .|...++.+...|. .|++++.+++..+.+++.+.+.+.+.-- ++++ .+ .+++|+|
T Consensus 12 ~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~----y~~a~li 81 (134)
T PRK04148 12 YEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI----YKNAKLI 81 (134)
T ss_pred cccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH----HhcCCEE
Confidence 334456889999999 88766666668899 9999999999999998888765553211 1222 11 1279999
Q ss_pred EEcccChHHHHHHHHHhccC
Q 016363 278 FECIGLTSVMNDAFNSSREG 297 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~ 297 (390)
+.+-..+.....+++.-++-
T Consensus 82 ysirpp~el~~~~~~la~~~ 101 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKI 101 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHc
Confidence 98888877334444444443
No 167
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0039 Score=55.75 Aligned_cols=77 Identities=13% Similarity=0.169 Sum_probs=53.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE--cCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+++++...++ |-.+ ..++.+.+..+..+++|++|.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence 47899998 9999999988888899 999999998877666655422222 2222 1223333433333489999988
Q ss_pred ccC
Q 016363 281 IGL 283 (390)
Q Consensus 281 ~g~ 283 (390)
.|.
T Consensus 79 ag~ 81 (225)
T PRK08177 79 AGI 81 (225)
T ss_pred Ccc
Confidence 764
No 168
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.012 Score=52.82 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC---cEEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI---TDFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~---~~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +.+.. -+.+..+-.+..++.+.+.+... +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999998888899 899999988776544 33321 12221111012233333433322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998764
No 169
>PRK12742 oxidoreductase; Provisional
Probab=96.83 E-value=0.027 Score=50.57 Aligned_cols=77 Identities=19% Similarity=0.251 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
++++|||+|+ |++|.+.++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+ ...+.+.+.+ .+++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~--~~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK--SGALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH--hCCCcEE
Confidence 4789999998 9999999999999999 8877754 44544443 44554432 22221 1122233322 1369999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|++.|.
T Consensus 80 i~~ag~ 85 (237)
T PRK12742 80 VVNAGI 85 (237)
T ss_pred EECCCC
Confidence 999875
No 170
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.0055 Score=55.87 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC-cEEEcCCCCCCcCHHHHHHhhc--CC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~-~~v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
..+.+|||+|+ |.+|..++..+...|+ +|+++++++++.+.+.. .+. ..++..+-.+..++.+.+.+.. .+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 35789999998 9999999999998999 89999999887655432 121 1222222111223333333322 13
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 171
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.83 E-value=0.017 Score=49.45 Aligned_cols=103 Identities=17% Similarity=0.302 Sum_probs=68.7
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
...++++|+.++=+|+| .|..++++++..-..+||+++++++..+..+ +||.+.+..-.. +..+.+.++.
T Consensus 28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-
Confidence 56788999977777874 3566677775554459999999999887764 488764322221 2223333221
Q ss_pred CCccEEEEcccC--hHHHHHHHHHhccCCceEEEEcc
Q 016363 272 GGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 272 ~g~D~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
.+|.+|---|. +..++.++..|+++ |++|.-..
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 69999854443 23467899999999 99986653
No 172
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.82 E-value=0.017 Score=58.44 Aligned_cols=107 Identities=12% Similarity=0.116 Sum_probs=68.3
Q ss_pred HHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c--------CC-----cEEEcCCCCCCc
Q 016363 196 KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--------GI-----TDFINPATCGDK 260 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~--------g~-----~~v~~~~~~~~~ 260 (390)
...+.+.|.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ + |. -.++..+- .
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL---t 148 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL---E 148 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC---C
Confidence 4566789999999998 9999999999988999 99999999888754422 1 21 11221111 1
Q ss_pred CHHHHHHhhcCCCccEEEEcccChH---------------HHHHHHHHhccC-CceEEEEcccC
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLTS---------------VMNDAFNSSREG-WGKTVILGVEM 308 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~~ 308 (390)
+ .+.+.+.. +++|+||.++|... ....+++.+... .++||.++...
T Consensus 149 D-~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 149 K-PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred C-HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 1 22333332 37999999987531 123334444332 26898887543
No 173
>PRK14967 putative methyltransferase; Provisional
Probab=96.82 E-value=0.069 Score=47.83 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=63.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
....++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++ .+....+.. .++.+. +..
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~-----~d~~~~---~~~ 99 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR-----GDWARA---VEF 99 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE-----Cchhhh---ccC
Confidence 445678899999999976 8888888775 55599999999987775543 343322221 133222 122
Q ss_pred CCccEEEEcccC---------------------------hHHHHHHHHHhccCCceEEEE
Q 016363 272 GGADYCFECIGL---------------------------TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 272 ~g~D~vid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+|+|+...+- ...+..+.+.|+++ |+++.+
T Consensus 100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 389999965220 01235577888988 888755
No 174
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0057 Score=58.35 Aligned_cols=79 Identities=19% Similarity=0.316 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEE-E--cCCCCCCcCHHHHHHhhc--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-I--NPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v-~--~~~~~~~~~~~~~i~~~~--~ 271 (390)
.+++|||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++.|.+.. + |-.+ ..++.+.+.+.. .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 5689999998 9999999999999999 899999998887544 33455432 2 2222 122222222221 2
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 479999999884
No 175
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.018 Score=52.11 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=61.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
++.++||+|+ |.+|...+..+...|+ +|++++++.. +.+.+ +..+.. ..+ |..+ ..++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4678999998 9999999998888999 8999888653 33222 223332 122 2222 2223333333322
Q ss_pred -CCccEEEEcccCh-------------------HHHHHHHHHhccCCceEEEEcc
Q 016363 272 -GGADYCFECIGLT-------------------SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 272 -~g~D~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+++|+++.+.+.. ..++.+.+.+... |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2699999887642 1234455555556 78888764
No 176
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.015 Score=53.48 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ...+.. .++..+-.+..++.+.+.+... ++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999998888999 899999988765433 222322 2222111112234444444322 37
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 999998876
No 177
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.78 E-value=0.022 Score=49.57 Aligned_cols=101 Identities=18% Similarity=0.195 Sum_probs=63.3
Q ss_pred HhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcCC-Cc
Q 016363 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTDG-GA 274 (390)
Q Consensus 197 ~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~-g~ 274 (390)
...+++|++||.+|+|.-+.......+..+..+|++++.++.. ...+...+ .+..+ ....+.+.+..++ ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence 3557899999999997666544444444343489999998864 11233222 12222 3334455554555 89
Q ss_pred cEEEE-cc----cC------------hHHHHHHHHHhccCCceEEEEc
Q 016363 275 DYCFE-CI----GL------------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 275 D~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
|+|+. .. |. ...++.+.+.|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99995 32 21 23467788999998 9998754
No 178
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.016 Score=53.04 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++.. ..+ |..+ ..++.+.+.+... +.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999998 9999999999999999 999999998766544 344432 122 2222 2233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998874
No 179
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0063 Score=55.63 Aligned_cols=87 Identities=17% Similarity=0.194 Sum_probs=56.6
Q ss_pred HhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc--EEEcCCCCCCcCHHHHHHhhcC-
Q 016363 197 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT--DFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 197 ~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~--~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
....-++.++||+|+ |.+|..+++.+...|+ +|+.++++++..+.+.+ .... .++..+-.+...+.+.+.+...
T Consensus 5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 344457889999998 9999999999999999 89999998877665543 2211 2222221112223333333221
Q ss_pred -CCccEEEEcccCh
Q 016363 272 -GGADYCFECIGLT 284 (390)
Q Consensus 272 -~g~D~vid~~g~~ 284 (390)
+++|+||.+.|..
T Consensus 84 ~~~~d~vi~~ag~~ 97 (264)
T PRK12829 84 FGGLDVLVNNAGIA 97 (264)
T ss_pred hCCCCEEEECCCCC
Confidence 3799999988854
No 180
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.75 E-value=0.0064 Score=55.45 Aligned_cols=79 Identities=23% Similarity=0.358 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+|++|||+|+ |++|.+.++.+...|+ +|+++++++.+.+.+ .+++...+ .|..+ ...+.+.+.+... +++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999999999999999 999999988776544 34443222 23222 1223333333221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 181
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.70 E-value=0.05 Score=47.97 Aligned_cols=93 Identities=12% Similarity=-0.066 Sum_probs=58.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh-HHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|.+|||+|+|.+|...+..+...|+ +|+++++...+ ...+..-+. ....... +...- -.++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~-i~~~~~~-----~~~~~----l~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGK-IRWKQKE-----FEPSD----IVDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCC-EEEEecC-----CChhh----cCCceEEEEc
Confidence 56799999999999999998888998 88888754322 222222121 1111121 11110 1279999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEccc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.+. ++..+...+.. +.++.+...
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d~ 102 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVITD 102 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECCC
Confidence 99988 66655555555 666666544
No 182
>PRK08017 oxidoreductase; Provisional
Probab=96.69 E-value=0.0098 Score=54.11 Aligned_cols=77 Identities=18% Similarity=0.287 Sum_probs=55.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHH---HHHHhhcCCCccEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVS---QVIKEMTDGGADYCF 278 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~---~~i~~~~~~g~D~vi 278 (390)
+++||+|+ |.+|...++.+...|+ +|+++++++++.+.+++.+.+.+. |..+ ...+. +.+.+...+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 57999998 9999999999999999 999999999988887777755432 3222 12222 233333334789999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
.+.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 88774
No 183
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.021 Score=51.58 Aligned_cols=81 Identities=19% Similarity=0.140 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ..+... ++..+-.+..++.+.+.+... ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 8999998887655432 233322 221111011222222222221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 184
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.68 E-value=0.028 Score=44.74 Aligned_cols=102 Identities=19% Similarity=0.343 Sum_probs=67.5
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHHHh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE 268 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i~~ 268 (390)
.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++ ++.. .++..+- ...+..
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~------~~~~~~ 84 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA------PEALED 84 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc------cccChh
Confidence 3556677888999999976 8888888887754499999999988777643 4432 2222111 110111
Q ss_pred hcCCCccEEEEcccCh---HHHHHHHHHhccCCceEEEEc
Q 016363 269 MTDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~~g~D~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.+|+|+...+.. ..++.+.+.|+++ |+++...
T Consensus 85 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 85 -SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred -hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 123799999754332 2477889999998 9987653
No 185
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.023 Score=51.32 Aligned_cols=81 Identities=20% Similarity=0.257 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMT--DGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g~D~ 276 (390)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... .+..+-.+..+..+.+.... .+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999998 9999999999999999 999999987766544 3455432 22111101112222222222 137999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9998874
No 186
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.019 Score=54.84 Aligned_cols=79 Identities=20% Similarity=0.171 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEE---EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF---INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v---~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.+|||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++.|.+.. .|..+ ..++.+.+.....
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4678999998 9999999999988999 999999998776544 33454332 23222 1223333332222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 379999999884
No 187
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.62 E-value=0.047 Score=46.04 Aligned_cols=89 Identities=18% Similarity=0.115 Sum_probs=57.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|||+|+|.+|..-++.+...|+ +|++++ ++..+.+.+++.-. +.... +.+. .-.++|+|+-++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~~----dl~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSND----DIKDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cChh----cCCCceEEEECC
Confidence 57889999999999999998888999 888774 44444444554211 22222 2111 012799999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEc
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+... .+..+...+.. +..+...
T Consensus 79 ~d~e-~N~~i~~~a~~-~~~vn~~ 100 (157)
T PRK06719 79 NQHA-VNMMVKQAAHD-FQWVNVV 100 (157)
T ss_pred CCHH-HHHHHHHHHHH-CCcEEEC
Confidence 9888 76666655554 3344443
No 188
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.015 Score=52.41 Aligned_cols=77 Identities=18% Similarity=0.330 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ .+...+ .|..+ ...+.+.+.. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~--~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD--DAAIRAALAA--AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC--HHHHHHHHHH--hCCCCEEE
Confidence 5679999998 9999999999999999 89999999887765543 344322 23322 1112222221 13799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
No 189
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.60 E-value=0.0098 Score=54.49 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
++.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. ..+..+-.+..++.+.+.+... +.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5789999998 9999999999989999 89999999887766644 3322 2221111011223333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9998873
No 190
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.59 E-value=0.0099 Score=54.68 Aligned_cols=98 Identities=18% Similarity=0.214 Sum_probs=71.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
..+|.|+|+|.+|.-++.+|.-+|+ +|...+.+.+|++.+..+ +-+.-.-++. ...+.+.+. ++|++|.++
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~-----~aDlvIgaV 239 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK-----KADLVIGAV 239 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh-----hccEEEEEE
Confidence 3467888999999999999999999 999999999999999874 4331222222 123333332 689998754
Q ss_pred cCh------HHHHHHHHHhccCCceEEEEcccCC
Q 016363 282 GLT------SVMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 282 g~~------~~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
=-+ ...++.++.|+++ +.++++....+
T Consensus 240 LIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 240 LIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred EecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 321 1357789999999 99999986543
No 191
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.011 Score=54.62 Aligned_cols=78 Identities=19% Similarity=0.215 Sum_probs=53.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEEE--cCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFI--NPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v~--~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +.++...++ |..+ ..++.+.+.+... +++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 578999998 9999999998888899 899999998877654 334412222 3322 2233333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
No 192
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.028 Score=51.20 Aligned_cols=81 Identities=14% Similarity=0.150 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---cCCcE-EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+...+ .+... .+..+-.+..++.+.+.+... +++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999998 9999999998888999 88989988877644433 33321 221111011223333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
No 193
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.56 E-value=0.015 Score=57.12 Aligned_cols=99 Identities=13% Similarity=0.066 Sum_probs=64.2
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+--.+.+|||+|+|.+|.+++..+...|+.+++++.|+.++.+.+. +++...++.++ ++.+.+ ..+|+
T Consensus 176 ~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~-----~l~~~l-----~~aDi 245 (414)
T PRK13940 176 LDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS-----ELPQLI-----KKADI 245 (414)
T ss_pred hcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH-----HHHHHh-----ccCCE
Confidence 34456789999999999999999999999879999999988866554 45422232221 122222 25999
Q ss_pred EEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 277 CFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 277 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
||.|++.++.+-. ...++...=.+++++.+
T Consensus 246 VI~aT~a~~~vi~-~~~~~~~~~~~iDLavP 275 (414)
T PRK13940 246 IIAAVNVLEYIVT-CKYVGDKPRVFIDISIP 275 (414)
T ss_pred EEECcCCCCeeEC-HHHhCCCCeEEEEeCCC
Confidence 9999998773211 12222210245667654
No 194
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.54 E-value=0.023 Score=48.44 Aligned_cols=98 Identities=14% Similarity=0.177 Sum_probs=65.8
Q ss_pred hhccccchhhHHHHHHHHhCCCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 180 aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
....|+....+...+.+...--.|.+|||+|+|. +|..++..+...|+ +|+++.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~-------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK-------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch--------------------
Confidence 3445655555554443344456899999999986 59999999999999 8888876521
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++.+.+. .+|+||.+++.+..+. ...++++ -.++.++.+.
T Consensus 80 --~l~~~l~-----~aDiVIsat~~~~ii~--~~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 --NLKEHTK-----QADIVIVAVGKPGLVK--GDMVKPG-AVVIDVGINR 119 (168)
T ss_pred --hHHHHHh-----hCCEEEEcCCCCceec--HHHccCC-eEEEEccCCC
Confidence 2333332 5899999999876332 2356665 6778887543
No 195
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.011 Score=55.34 Aligned_cols=79 Identities=19% Similarity=0.293 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC--cEE---EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TDF---INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~--~~v---~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|.++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++. ... .|..+ ..++.+.+.+... +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 999999998877655 33542 111 23222 1223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999985
No 196
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.012 Score=53.99 Aligned_cols=79 Identities=13% Similarity=0.159 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ .+.. .++ |..+ ...+.+.+.+...
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999999888999 99999999877654432 2322 222 2222 1222223333221
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 379999998873
No 197
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.013 Score=54.76 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+.+ ..+..+-.+..++.+.+.... -++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888899 99999999877655432 2332 122221101122333333221 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 198
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.48 E-value=0.081 Score=46.74 Aligned_cols=94 Identities=17% Similarity=0.143 Sum_probs=61.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|.+|||+|+|.+|...++.+...|+ +|++++.... .+..+.+.|.-..+ ..+ +.... + .++|+||-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~-----~~~~d--l--~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARC-----FDADI--L--EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCC-----CCHHH--h--CCcEEEEEC
Confidence 46799999999999999999999999 8988886653 33333333421222 122 11111 1 279999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEccc
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.+..-..+....+.. |..+.+...
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d~ 102 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVDD 102 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCC
Confidence 99886344555556566 777766543
No 199
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.013 Score=52.46 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHH----HHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++... +...+...+ .|..+ ..++.+.+.+... ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 3789999998 9999999998888899 89999998765332 222333222 12221 1233333333222 27
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+||.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998874
No 200
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.47 E-value=0.029 Score=55.87 Aligned_cols=80 Identities=19% Similarity=0.383 Sum_probs=51.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh--hhHHH-HHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEI-GKKFGITDF-INPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~--~~~~~-~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.++.++||+|+ |++|...++.+...|+ +|+++++.+ ++.+. ..+++...+ +|..+ ...+.+.+..... ++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~ 284 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGG 284 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCC
Confidence 35789999998 9999999999999999 899988743 22322 234554322 23332 1222222222221 27
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 285 id~vi~~AG~ 294 (450)
T PRK08261 285 LDIVVHNAGI 294 (450)
T ss_pred CCEEEECCCc
Confidence 9999999883
No 201
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.013 Score=53.24 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE--EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
++.++||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... .+..+-.+..++.+.+.+... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999998 9999999998888999 8999999887655554442211 222221111223333333222 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999884
No 202
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.45 E-value=0.013 Score=53.78 Aligned_cols=78 Identities=14% Similarity=0.142 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCc-EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.+++|+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+. +.+ ..+ |..+ ..+..+.+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999998 9999999999989999 999999988777666543 322 112 2222 1223333433322 379
Q ss_pred cEEEEccc
Q 016363 275 DYCFECIG 282 (390)
Q Consensus 275 D~vid~~g 282 (390)
|++|.+.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999886
No 203
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.45 E-value=0.03 Score=53.01 Aligned_cols=94 Identities=10% Similarity=0.117 Sum_probs=61.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|+|+|+ |.+|...++.+...|. +|++++|+.++...+...+.+.+. |..+ . +.+.+... ++|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~-g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK-GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC-CCCEEEECCC
Confidence 6999998 9999999999888998 999999988776655555654332 2221 1 22322222 6899999876
Q ss_pred ChH------------HHHHHHHHhccCC-ceEEEEcc
Q 016363 283 LTS------------VMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 283 ~~~------------~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
... ....+++.++..+ .+++.++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 321 1234455555541 37877765
No 204
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.014 Score=53.13 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE-E--EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-F--INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~-v--~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+ .+.+. . .|..+ ..++.+.+.+...
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4789999998 9999999999999999 99999998877655432 23221 1 22222 1233333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 205
>PRK06196 oxidoreductase; Provisional
Probab=96.42 E-value=0.016 Score=54.78 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEE--cCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI--NPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~--~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.+.+|||+|+ |++|.+++..+...|+ +|+++++++++.+.+. ++..-..+ |-.+ ..++.+.+.+... +++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4679999998 9999999998888999 8999999988765442 23211222 2222 1223333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|.+.|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99998873
No 206
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.02 Score=52.15 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=51.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EE--EcCCCCCCcCHHHHHHhhcCCCc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
+.++||+|+ |.+|..+++.+...|+ +|+++++++.+.+.+.+ .+.. .+ .|..+ .+.+.+...+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~------~~~~~~~~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD------AIDRAQAAEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC------HHHHHHHhcCCC
Confidence 458999998 9999999999999999 99999998876655432 2322 11 22222 223444434489
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 75 d~vi~~ag~ 83 (257)
T PRK09291 75 DVLLNNAGI 83 (257)
T ss_pred CEEEECCCc
Confidence 999998873
No 207
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.41 E-value=0.015 Score=45.66 Aligned_cols=92 Identities=26% Similarity=0.297 Sum_probs=60.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHHhc----C--CcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKF----G--ITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~~----g--~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
|+.+||-+|+|. |..++.+++ ..++ +|++++.+++-.+.+++. + ....+... ++ .. .....+++
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~~-~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-EF-DPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-HG-GTTTSSCE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-cc-CcccCCCC
Confidence 688999999864 777777777 4677 999999999988877542 2 22222222 23 11 11112279
Q ss_pred cEEEEcc-cCh---H------HHHHHHHHhccCCceEEE
Q 016363 275 DYCFECI-GLT---S------VMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 275 D~vid~~-g~~---~------~~~~~~~~l~~~~G~~v~ 303 (390)
|+|+... ... . .++.+.+.|+++ |+++.
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 9999766 211 1 267888999998 98875
No 208
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.015 Score=53.89 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc--EEE--cCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFI--NPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~--~v~--~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.... ..+ |..+ ...+.+.+.+... +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3578999998 9999999998888899 899999998887766553221 122 2222 1223333333222 269
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++++.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999999885
No 209
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.39 E-value=0.042 Score=46.17 Aligned_cols=99 Identities=21% Similarity=0.341 Sum_probs=63.3
Q ss_pred HHHHHHHhC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 191 ~~~l~~~~~-~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
+.++.+..+ .-.|.+++|.|=|.+|.-.++.++.+|+ +|++++..|-+.-.+..-|.+. . ++.+.+
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~--------~~~~a~--- 76 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-M--------TLEEAL--- 76 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E---------HHHHT---
T ss_pred HHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-c--------CHHHHH---
Confidence 334444444 4589999999999999999999999999 9999999997765555445432 1 233332
Q ss_pred cCCCccEEEEcccChHHH-HHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGLTSVM-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g 305 (390)
...|++|.++|....+ .+-+..|+++ -.+..+|
T Consensus 77 --~~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~G 110 (162)
T PF00670_consen 77 --RDADIFVTATGNKDVITGEHFRQMKDG-AILANAG 110 (162)
T ss_dssp --TT-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESS
T ss_pred --hhCCEEEECCCCccccCHHHHHHhcCC-eEEeccC
Confidence 2589999999987633 5778889976 5555555
No 210
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.38 E-value=0.034 Score=51.77 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=51.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC----CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG----ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g----~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
..+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+.+ ++ ...+...+ ++.+.+ ..+|
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~-----~~~~~~-----~~aD 194 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS-----DLAAAL-----AAAD 194 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc-----chHhhh-----CCCC
Confidence 356899999999999999999999999899999999988766533 32 11222211 121111 2699
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||+|++.
T Consensus 195 iVInaTp~ 202 (284)
T PRK12549 195 GLVHATPT 202 (284)
T ss_pred EEEECCcC
Confidence 99999653
No 211
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38 E-value=0.016 Score=52.53 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC--Cc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG--IT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g--~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. +. .. ..+..+-.+..++...+.+... +++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999998 9999999998888899 89999999887655432 22 21 1221111112233333333211 279
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+||.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999998875
No 212
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.37 E-value=0.017 Score=58.20 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=56.3
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.+.++++|+|+|.|..|++++++++..|+ +|++.+..+.+.+.++++|...+ .... ..+.+. .+|+|+
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~-----~~~~l~-----~~D~VV 75 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD-----AVQQIA-----DYALVV 75 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc-----hHhHhh-----cCCEEE
Confidence 35678999999999999999999999999 99999987777766777777433 2211 112221 579999
Q ss_pred EcccChH
Q 016363 279 ECIGLTS 285 (390)
Q Consensus 279 d~~g~~~ 285 (390)
.+.|-+.
T Consensus 76 ~SpGi~~ 82 (488)
T PRK03369 76 TSPGFRP 82 (488)
T ss_pred ECCCCCC
Confidence 9888654
No 213
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.36 E-value=0.037 Score=50.29 Aligned_cols=81 Identities=21% Similarity=0.283 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+.. +.+..+-.+..++.+.+..... ++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999998888899 9999999988765442 22332 1222111112223333333221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+++.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 214
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.36 E-value=0.012 Score=50.36 Aligned_cols=103 Identities=19% Similarity=0.139 Sum_probs=66.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEc-CCCCC-------------CcCHHHHHHh
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN-PATCG-------------DKTVSQVIKE 268 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~-~~~~~-------------~~~~~~~i~~ 268 (390)
..+|+|+|+|.+|+.|+.+++.+|+ +|+..+..+++.+.++..+...+.. ..+.. .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 3789999999999999999999999 9999999999988888877654432 11100 0112222222
Q ss_pred hcCCCccEEEEccc--C---hH-HHHHHHHHhccCCceEEEEcccC
Q 016363 269 MTDGGADYCFECIG--L---TS-VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 269 ~~~~g~D~vid~~g--~---~~-~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
... .+|+||-+.- + +. ..+..++.|+++ ..|+++....
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~ 142 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQ 142 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecC
Confidence 211 5788885322 1 11 135678889887 7888887544
No 215
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.35 E-value=0.022 Score=51.55 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--HHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+++++.. .+.+++.+.. ..+..+-.+..++.+.+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999998 9999999999988999 99999987521 2333444432 2222111112233333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|.+.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998874
No 216
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.024 Score=51.74 Aligned_cols=83 Identities=22% Similarity=0.304 Sum_probs=52.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhh-HHH----HHhcCC-c-EEEcCCCCCCcCHHHHHHhhc
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEK-FEI----GKKFGI-T-DFINPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~-~~~----~~~~g~-~-~v~~~~~~~~~~~~~~i~~~~ 270 (390)
+..+.+|||+|+ |++|.+.++-+... |+ +|+++++++++ .+. ++..+. + +++..+-.+..++.+.+.+..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999998 99999998876666 47 99999998775 432 233332 2 233222211233333344433
Q ss_pred C-CCccEEEEcccC
Q 016363 271 D-GGADYCFECIGL 283 (390)
Q Consensus 271 ~-~g~D~vid~~g~ 283 (390)
. +++|+++.+.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 489999987765
No 217
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.016 Score=52.76 Aligned_cols=80 Identities=19% Similarity=0.173 Sum_probs=52.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+.. ..+..+-.+...+.+.+.+... +++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999998 9999999999999999 99999998876654432 2322 2232221112233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999998874
No 218
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.32 E-value=0.0078 Score=46.91 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=59.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|||+|+|.+|..-++.+...|+ +|+++++.. +..+ +.-... . ..+.+ + -.++|+|+-++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~~---~--l~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFEE---D--LDGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-GG---G--CTTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHHH---H--HhhheEEEecC
Confidence 57899999999999999999999999 999999775 2222 111111 1 12211 1 12799999999
Q ss_pred cChHHHHHHHHHhccCCceEEEEcccCC
Q 016363 282 GLTSVMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
+.+..-+.+....+.. |..+.+.....
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p~ 95 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDDPE 95 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-CC
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCCcC
Confidence 9888445566666667 88888875443
No 219
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.023 Score=52.16 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCc-EEEcCCCCCCcCHHHHHHhhc-CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMT-DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~-~v~~~~~~~~~~~~~~i~~~~-~~g 273 (390)
++.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ + +.+ ..+..+-.+..++.+.+.+.. -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4789999998 9999999999999999 89999999877654432 2 322 122211111223333333332 137
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 86 iD~lv~nag~ 95 (263)
T PRK08339 86 PDIFFFSTGG 95 (263)
T ss_pred CcEEEECCCC
Confidence 9999998874
No 220
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.024 Score=50.54 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=52.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|-.+ ..++.+.+.++.++++|+++.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence 47899998 9999999988878899 8999999988877776665432 223222 12233332233333799999987
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 75
No 221
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.28 E-value=0.023 Score=51.40 Aligned_cols=80 Identities=21% Similarity=0.255 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... .+..+-.+...+.+.+..... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999998999 899999988765443 2234332 222111011223333333322 36
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (253)
T PRK08217 83 LNGLINNAG 91 (253)
T ss_pred CCEEEECCC
Confidence 899999887
No 222
>PRK06484 short chain dehydrogenase; Validated
Probab=96.28 E-value=0.04 Score=55.90 Aligned_cols=103 Identities=21% Similarity=0.267 Sum_probs=68.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEE-E--cCCCCCCcCHHHHHHhhcC--CC
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-I--NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v-~--~~~~~~~~~~~~~i~~~~~--~g 273 (390)
..|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ ++.... + |..+ ..++.+.+.+... +.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 36789999998 9999999999999999 99999999888766644 443321 2 3222 1233333333322 37
Q ss_pred ccEEEEcccChH--------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 274 ADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 274 ~D~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+|++|.+.|... ..+.++..++.. |+++.++..
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 999999887420 133445566556 899988754
No 223
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.021 Score=51.91 Aligned_cols=81 Identities=17% Similarity=0.172 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+. +.+.+. .+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4679999998 9999999998888999 8999999988765442 234332 221111011223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 224
>PRK06398 aldose dehydrogenase; Validated
Probab=96.25 E-value=0.03 Score=51.23 Aligned_cols=75 Identities=16% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~vi 278 (390)
.|.++||+|+ +++|.+.+..+...|+ +|+.+++++.+...+.. ...|-.+ ..++.+.+.+... +++|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~----~~~D~~~--~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYNDVDY----FKVDVSN--KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccCceEE----EEccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999998 9999999999999999 99999987654321100 1122222 1233333433322 3699999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98874
No 225
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.019 Score=52.54 Aligned_cols=79 Identities=18% Similarity=0.185 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCC-cE-EE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGI-TD-FI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~-~~-v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ .+. .. .+ |-.+ ..++.+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4789999998 9999999999999999 89999999877654422 111 11 12 2222 1223333333322
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++++++|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 379999999884
No 226
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.23 E-value=0.024 Score=52.45 Aligned_cols=100 Identities=17% Similarity=0.274 Sum_probs=60.7
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc--EEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT--DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~--~v~~~~~~~~~~~~~~i~ 267 (390)
+.+.+++++|++||-+|+| -|..+..+|+..|+ +|++++.|++..+.++ +.|.. .-+... ++ +
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-----D~----~ 122 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-----DY----R 122 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES------G----G
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-----ec----c
Confidence 4578899999999999987 56667778888899 9999999999887764 34522 112111 22 1
Q ss_pred hhcCCCccEEEE-----cccCh---HHHHHHHHHhccCCceEEEEcc
Q 016363 268 EMTDGGADYCFE-----CIGLT---SVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 268 ~~~~~g~D~vid-----~~g~~---~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
++. +.+|.|+. .+|.. ..++.+.+.|+|+ |+++.-..
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 121 27999864 44432 2367788999999 99875543
No 227
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.024 Score=51.93 Aligned_cols=82 Identities=22% Similarity=0.349 Sum_probs=53.7
Q ss_pred CCCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCcEE--E--cCCCCCCcCHHHHHH
Q 016363 199 GVEVGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITDF--I--NPATCGDKTVSQVIK 267 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~v--~--~~~~~~~~~~~~~i~ 267 (390)
.+..+.++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+ ++...+ + |..+ ..++.+.+.
T Consensus 13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~ 89 (262)
T PRK07831 13 GLLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALID 89 (262)
T ss_pred cccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHH
Confidence 3445789999997 6 799999999999999 89999988876654422 343222 2 2222 122333333
Q ss_pred hhc--CCCccEEEEcccC
Q 016363 268 EMT--DGGADYCFECIGL 283 (390)
Q Consensus 268 ~~~--~~g~D~vid~~g~ 283 (390)
+.. .+++|++|.+.|.
T Consensus 90 ~~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 221 1379999999984
No 228
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.22 E-value=0.044 Score=48.45 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=65.9
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHH
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 266 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i 266 (390)
.+..+++++++||-+|+| .|..++.+++..+ ..+|++++.+++-.+.+++ .+.. .++..+ ..+.+
T Consensus 65 ~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d------~~~~~ 137 (205)
T PRK13944 65 CELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD------GKRGL 137 (205)
T ss_pred HHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC------cccCC
Confidence 366778899999999885 3667777777664 2289999999887665543 4432 223221 11111
Q ss_pred HhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
. ..+.+|+|+-+.......+.+++.|+++ |+++..
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1 1237999997666555467888999999 998753
No 229
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.22 E-value=0.023 Score=52.51 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ + ++|.+.++.+...|+ +|+.++++++..+.+ +++|....+..+-.+..++.+.+.+... +
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 5789999998 4 899999999999999 899888775332222 2345333322211112223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|+++++.|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 79999998873
No 230
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.20 E-value=0.081 Score=47.00 Aligned_cols=100 Identities=20% Similarity=0.256 Sum_probs=66.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~~i 266 (390)
+....+++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.+++ .|.. .++..+. ..
T Consensus 68 ~~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~------~~-- 138 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG------TL-- 138 (212)
T ss_pred HHHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc------cc--
Confidence 3467789999999999885 36666777777653 289999999987766644 4433 2222211 00
Q ss_pred HhhcC-CCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 267 KEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 267 ~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
.+.. +.||+|+-...........++.|+++ |+++..
T Consensus 139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 0112 37999986555555467888999999 998764
No 231
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.049 Score=50.15 Aligned_cols=76 Identities=16% Similarity=0.228 Sum_probs=49.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE----EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD----FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~----v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ ..++.+.+.+... ++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899998 9999999998888999 899999887765443 2234321 123322 1222222222221 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999974
No 232
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.045 Score=48.62 Aligned_cols=74 Identities=14% Similarity=0.096 Sum_probs=48.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCC--CccEEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG--GADYCFE 279 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~--g~D~vid 279 (390)
.++||+|+ |.+|...+..+... . +|+++++++++.+.+.+ ....+++..+- .+ .+.+.++..+ ++|.+|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence 57999998 99999988877666 6 89999999887665543 21122332221 11 2233333333 7999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 9874
No 233
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.031 Score=50.36 Aligned_cols=81 Identities=16% Similarity=0.145 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |.+|..++..+...|. +|+++++++++.+.+.+ .+.. ..+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998 9999999999998999 99999999877654432 2222 1222111011233333333322 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 234
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.15 E-value=0.054 Score=47.77 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=31.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|..+++.+...|..+++.++..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999899999966
No 235
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.14 E-value=0.023 Score=53.87 Aligned_cols=80 Identities=19% Similarity=0.230 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCcE----EEcCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITD----FINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~----v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.|.+++|+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ .+... .+|-.+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 5889999998 9999998888888899 89999999988765422 22111 123222 01233344444444
Q ss_pred C-CccEEEEcccC
Q 016363 272 G-GADYCFECIGL 283 (390)
Q Consensus 272 ~-g~D~vid~~g~ 283 (390)
+ .+|++++++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 4 67799998874
No 236
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.14 E-value=0.027 Score=51.28 Aligned_cols=79 Identities=23% Similarity=0.359 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.+ +..|... .+ |..+ ..++.+.+.+...
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999998 9999999998888899 899999988765433 2223222 22 2222 2233333333221
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 379999999885
No 237
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.13 E-value=0.04 Score=46.97 Aligned_cols=95 Identities=14% Similarity=0.268 Sum_probs=62.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|.|+|| |.+|...++=|+.+|. .|++++|++.|....+.. .++..+- -+..+.-..+ .|+|+||++.+.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~Di---fd~~~~a~~l--~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKDI---FDLTSLASDL--AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeecccc---cChhhhHhhh--cCCceEEEeccC
Confidence 5789999 9999999999999999 999999999998654321 1221111 1111111111 289999999886
Q ss_pred hH---------HHHHHHHHhcc-CCceEEEEcccC
Q 016363 284 TS---------VMNDAFNSSRE-GWGKTVILGVEM 308 (390)
Q Consensus 284 ~~---------~~~~~~~~l~~-~~G~~v~~g~~~ 308 (390)
.. ..+.++..|+. +.-|+..+|..+
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 51 23446677776 225777787543
No 238
>PRK05717 oxidoreductase; Validated
Probab=96.12 E-value=0.028 Score=51.17 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.|.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++++... .+..+-.+..++.+.+.+... +++|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999998 9999999998888899 999998887665444 3344321 221111011223333333322 36999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9998874
No 239
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.12 E-value=0.18 Score=46.83 Aligned_cols=59 Identities=22% Similarity=0.278 Sum_probs=46.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec---CChhhHHHHHhcCCcEEEcCC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD---INPEKFEIGKKFGITDFINPA 255 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~---~~~~~~~~~~~~g~~~v~~~~ 255 (390)
+...+++|++|+=--+|.+|.+.+.+|+..|+ +++.+. .+++|++.++.+|++.++...
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45569999966555569999999999999999 666554 356888999999998776554
No 240
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.11 E-value=0.029 Score=51.26 Aligned_cols=78 Identities=19% Similarity=0.250 Sum_probs=50.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+....+..+-.+..++.+.+.+... +++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899998 9999999999888999 8999999987765442 223222222221112233333333322 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 998874
No 241
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.10 E-value=0.09 Score=47.22 Aligned_cols=92 Identities=23% Similarity=0.223 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEecCC----hhh--------HHHHHhcCCcEEEcCCCCCCcCHHHHH
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRAS--KIIGVDIN----PEK--------FEIGKKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~--~Vi~~~~~----~~~--------~~~~~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
-.+.+|+|+|+|..|.+++..+...|+. +++.++++ .++ .++++.++... . + .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 4678999999999999999999999997 89999998 444 22334433211 0 1 2344444
Q ss_pred HhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
. ++|++|.+++........++.|.+. ..++.+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 2 4899999997443224667777766 5555443
No 242
>PRK06128 oxidoreductase; Provisional
Probab=96.10 E-value=0.073 Score=49.88 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--H----HHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--F----EIGKKFGITDF-INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~----~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.+.+..+...|+ +|+.+.++.+. . +.++..+.... +..+-.+...+.+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4789999998 9999999999888999 88877654321 1 22333443322 21111011223333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 133 g~iD~lV~nAg~ 144 (300)
T PRK06128 133 GGLDILVNIAGK 144 (300)
T ss_pred CCCCEEEECCcc
Confidence 379999998874
No 243
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.028 Score=51.33 Aligned_cols=81 Identities=16% Similarity=0.236 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c-----CCcE-EEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GITD-FINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~-----g~~~-v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+.+ + +... ++..+-.+..++.+.+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999998 9999999999999999 89999998877654422 2 2221 221111012233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (260)
T PRK07063 85 GPLDVLVNNAGI 96 (260)
T ss_pred CCCcEEEECCCc
Confidence 379999999884
No 244
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.07 E-value=0.03 Score=51.20 Aligned_cols=81 Identities=14% Similarity=0.211 Sum_probs=50.2
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEecCChhhHH---HH-HhcCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFE---IG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~Vi~~~~~~~~~~---~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.|.++||+|++ ++|.+.++.+...|+ +|+.++++++..+ .+ ++++....+..+-.+..++.+.+.+... +
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999973 899999999888999 8999888764332 22 2334323332221112233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|+++++.|.
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 79999998873
No 245
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.031 Score=51.55 Aligned_cols=81 Identities=20% Similarity=0.281 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-h---cC--Cc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K---FG--IT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~---~g--~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+... + .+ .. .++..+-.+..++.+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3679999998 9999999999999999 8999999877654332 2 21 11 2221111111233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 85 ~~~d~li~~ag~ 96 (276)
T PRK05875 85 GRLHGVVHCAGG 96 (276)
T ss_pred CCCCEEEECCCc
Confidence 379999998873
No 246
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.032 Score=50.78 Aligned_cols=79 Identities=14% Similarity=0.157 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c---CCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~---g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ + +.. ..+ |..+ ..++...+.+...
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 5689999998 9999999999889999 99999998877654432 2 322 112 2222 2233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+.+|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 369999998874
No 247
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.032 Score=50.52 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c--CCc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~--g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+...+ + +.. ..+..+-.+...+.+.+.+... +++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999998 9999999998888898 89999998876544322 2 322 2222111111223333333222 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
No 248
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.015 Score=53.46 Aligned_cols=77 Identities=19% Similarity=0.303 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
.+.+++|+|+ |.+|...++.+...|+ +|+++++++++.+... +...+ .|..+ ..++.+.+.+... +.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEE
Confidence 3568999998 9999999998888899 8999999876654322 22211 22222 2334444444322 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999985
No 249
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.02 E-value=0.018 Score=51.04 Aligned_cols=101 Identities=19% Similarity=0.269 Sum_probs=65.9
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~ 267 (390)
+.+.+.+++|++||-+|+| .|..++-+++..|.. +|+.+++.++-.+.+ +.++.+.+ +...+ ...
T Consensus 64 ~l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd-----g~~--- 134 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD-----GSE--- 134 (209)
T ss_dssp HHHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES------GGG---
T ss_pred HHHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc-----hhh---
Confidence 3477889999999999875 478888888877743 699999888755444 34565432 22222 111
Q ss_pred hhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 268 EMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 268 ~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
-+... +||.|+-+.+-+......++.|+++ |+++.-
T Consensus 135 g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 135 GWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp TTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred ccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 11222 8999998877766567889999999 998863
No 250
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.01 E-value=0.035 Score=50.64 Aligned_cols=81 Identities=21% Similarity=0.325 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. ..+.. ..+..+-.+..++.+.+.++.. ++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 9999999998888999 9999999887765443 22322 1221111011223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 251
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.033 Score=50.58 Aligned_cols=81 Identities=22% Similarity=0.293 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+.. ..+..+-.+..++.+.+.+... ++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 9999999998888899 899999998765433 233432 2221111011223333322211 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 252
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.00 E-value=0.11 Score=46.38 Aligned_cols=103 Identities=16% Similarity=0.197 Sum_probs=63.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-------------------hhHHHH----HhcCCc-EEEcCCCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFEIG----KKFGIT-DFINPATC 257 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~~~----~~~g~~-~v~~~~~~ 257 (390)
+.++|+|+|.|++|..++..+...|+.++..++-.. .|.+.+ +...++ ++.-.+++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 467899999999999999999999998888777321 121222 222222 12111111
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHH-HhccCCceEEEEcccC
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFN-SSREGWGKTVILGVEM 308 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~-~l~~~~G~~v~~g~~~ 308 (390)
=-.+.+.++..+++|+|+||..+-.+--.++. |.+.. -.++..+..+
T Consensus 109 ---~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 109 ---ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred ---hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 11344555666699999999998663333444 55544 6677666443
No 253
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.036 Score=50.68 Aligned_cols=80 Identities=19% Similarity=0.262 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
+.++||+|+ |.+|..+++.+...|+ +|+++++++.+.+.+ ...+... ++..+-.+...+.+.+.+... +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 357999998 9999999999889999 999999987765433 2234322 221111111233333333322 269
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999999874
No 254
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.041 Score=50.35 Aligned_cols=81 Identities=21% Similarity=0.272 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c--CCc-EEEcCCCCCCcCHHHHHHhhc-CCCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GIT-DFINPATCGDKTVSQVIKEMT-DGGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~--g~~-~v~~~~~~~~~~~~~~i~~~~-~~g~D 275 (390)
++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.. + +.. ..+..+-.+...+.+...... .+++|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999998 9999999998888999 89999999887655532 2 211 122111101122222222221 24799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99998875
No 255
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.034 Score=50.44 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |.+|.+.++.+...|+ +|+.+++++++.+.+.+ .+.. ..+..+-.+..++.+.+.+... +.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999999999999 99999998776554422 2322 2222211011223333333322 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++.+.|.
T Consensus 86 id~li~~ag~ 95 (252)
T PRK07035 86 LDILVNNAAA 95 (252)
T ss_pred CCEEEECCCc
Confidence 9999998873
No 256
>PRK06194 hypothetical protein; Provisional
Probab=95.99 E-value=0.034 Score=51.55 Aligned_cols=81 Identities=17% Similarity=0.244 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc---CCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~---g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+. ++ +... ++..+-.+..++.+.+.... .++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888999 8999998876654432 22 3322 12211101122333333222 136
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 257
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.98 E-value=0.04 Score=49.50 Aligned_cols=79 Identities=23% Similarity=0.294 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-E--EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v--~~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.+|||+|+ |.+|...++.+...|. +|+++++++++.+.+ +..+... + .|..+ ...+.+.+.+...
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3578999998 9999999998888899 899999998775443 2334332 2 12222 2233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|.++.++|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 368999998865
No 258
>PRK08643 acetoin reductase; Validated
Probab=95.98 E-value=0.034 Score=50.59 Aligned_cols=78 Identities=19% Similarity=0.270 Sum_probs=51.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+... .+ |..+ ...+.+.+.+... +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 568999998 9999999999988999 9999999887654442 223222 12 2222 1223333333321 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 259
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.035 Score=50.67 Aligned_cols=77 Identities=17% Similarity=0.187 Sum_probs=52.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC-Cc-EE--EcCCCCCCcCHHHHHHhhc---CCCc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-IT-DF--INPATCGDKTVSQVIKEMT---DGGA 274 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g-~~-~v--~~~~~~~~~~~~~~i~~~~---~~g~ 274 (390)
.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.. ++ .. .+ +|..+ ..++.+.+.+.. .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47999998 9999999998888999 99999999888766543 32 11 12 23322 223333333322 3479
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999999885
No 260
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.98 E-value=0.12 Score=50.25 Aligned_cols=101 Identities=18% Similarity=0.171 Sum_probs=69.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHH-HHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
+..+--.+.+|||+|+|-+|..++..+...|..+|++.-|+.+|.+ +++++|+..+ ..+ ++.+.+. .+
T Consensus 171 ~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~-----el~~~l~-----~~ 239 (414)
T COG0373 171 RIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE-----ELLEALA-----EA 239 (414)
T ss_pred HHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH-----HHHHhhh-----hC
Confidence 3334347889999999999999999999999889999999999866 4567885432 221 1222222 59
Q ss_pred cEEEEcccChHHH---HHHHHHhccCCc-eEEEEccc
Q 016363 275 DYCFECIGLTSVM---NDAFNSSREGWG-KTVILGVE 307 (390)
Q Consensus 275 D~vid~~g~~~~~---~~~~~~l~~~~G-~~v~~g~~ 307 (390)
|+||.+++.++.+ ......++.... .+++++.+
T Consensus 240 DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 240 DVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred CEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 9999999876632 344455555423 45666644
No 261
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.034 Score=51.40 Aligned_cols=77 Identities=16% Similarity=0.179 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCC--c-EEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI--T-DFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~--~-~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+. . .++ |..+ ..++.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 568999998 9999999998888899 99999998876654432 221 1 222 2222 223333 444322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999998874
No 262
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.035 Score=51.23 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=51.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFI--NPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.++||+|+ |.+|...++.+...|. +|+++++++++.+.+++ .+.. .++ |..+ ...+.+.+.+... +++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999998 9999999998888899 99999999887776654 2322 112 2222 1223333333222 37899
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.++|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998874
No 263
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.97 E-value=0.09 Score=46.26 Aligned_cols=81 Identities=32% Similarity=0.398 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
-.|.+|+|+|.|.+|..+++.+...|+ +|++.++++++.+.+.+ +++. .++..+ + ....+|+++-
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----l-------~~~~~Dv~vp 91 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----I-------YSVDADVFAP 91 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----h-------ccccCCEEEe
Confidence 367899999999999999999999999 99999999888776654 4643 333211 1 1116889986
Q ss_pred cccChHHHHHHHHHhc
Q 016363 280 CIGLTSVMNDAFNSSR 295 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~ 295 (390)
|..+.......++.|+
T Consensus 92 ~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 92 CALGGVINDDTIPQLK 107 (200)
T ss_pred cccccccCHHHHHHcC
Confidence 6554443455566665
No 264
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.96 E-value=0.097 Score=47.87 Aligned_cols=78 Identities=14% Similarity=0.274 Sum_probs=48.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCCh---hhHHHH-Hhc-CCc-EEE--cCCCCCCcCHHHHHHhhc
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIG-KKF-GIT-DFI--NPATCGDKTVSQVIKEMT 270 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~---~~~~~~-~~~-g~~-~v~--~~~~~~~~~~~~~i~~~~ 270 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.++++. ++.+.+ .++ +.. ..+ |-.+ ..+..+.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4789999987 4999999998888999 898887653 333333 223 221 122 2222 233333444333
Q ss_pred C--CCccEEEEccc
Q 016363 271 D--GGADYCFECIG 282 (390)
Q Consensus 271 ~--~g~D~vid~~g 282 (390)
. +++|+++++.|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 2 47999999876
No 265
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.038 Score=49.97 Aligned_cols=81 Identities=22% Similarity=0.252 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..+.. ..+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888999 9999999876654332 22222 2222211011222222222221 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 9999998884
No 266
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.96 E-value=0.078 Score=46.31 Aligned_cols=76 Identities=22% Similarity=0.245 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCcEE-EcCCCCCCcCHHHHHHhhcCCCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITDF-INPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~~v-~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ + +.... .+..+ ..++.+.+ .++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----~~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI-----KGA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH-----hcC
Confidence 5789999997 9999998888888898 99999999887665533 2 22221 11111 11222222 268
Q ss_pred cEEEEcccChH
Q 016363 275 DYCFECIGLTS 285 (390)
Q Consensus 275 D~vid~~g~~~ 285 (390)
|+||.+++...
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999888665
No 267
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.04 Score=50.28 Aligned_cols=80 Identities=14% Similarity=0.113 Sum_probs=51.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCC--c-EEEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--T-DFINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~--~-~v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
+.+|||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +.. + ..+..+-.+..++.+.+.+... +.+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 468999998 9999999998888899 99999999887665433 221 1 1221111011233333333322 2689
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++.+.|.
T Consensus 81 ~lv~~ag~ 88 (257)
T PRK07024 81 VVIANAGI 88 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 268
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.94 E-value=0.093 Score=47.22 Aligned_cols=100 Identities=17% Similarity=0.184 Sum_probs=60.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-------------------hHH----HHHhcCCcEEEcCCCCCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KFE----IGKKFGITDFINPATCGD 259 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-------------------~~~----~~~~~g~~~v~~~~~~~~ 259 (390)
..+|+|+|+|++|..++..+...|..+++.++...- |.+ .++++.++.-+...+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--- 87 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--- 87 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence 468999999999999999999999989998885431 111 222333332222111
Q ss_pred cCH-HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 260 KTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 260 ~~~-~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+ .+.+.++...++|+|+||..+...-..+.+.....+-.++..+
T Consensus 88 ~~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~ 134 (231)
T cd00755 88 EFLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM 134 (231)
T ss_pred eecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 111 1233344444799999999987744445555544413444444
No 269
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.94 E-value=0.039 Score=49.88 Aligned_cols=80 Identities=20% Similarity=0.171 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+.. .++..+-.+...+.+.+..... ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999999988999 8999998887655442 22322 2222221011223333333222 36
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 999999887
No 270
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.93 E-value=0.031 Score=52.00 Aligned_cols=77 Identities=12% Similarity=-0.001 Sum_probs=52.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+.+++|+|+|+.+.+++..+..+|+++|+++.|+++|.+.+.+ ++.. .+.... ..+.+.... ..+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~-~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE-KAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc-cCCCEEEE
Confidence 57899999999999999999999998899999999988766643 4321 111110 001111111 26999999
Q ss_pred cccChH
Q 016363 280 CIGLTS 285 (390)
Q Consensus 280 ~~g~~~ 285 (390)
|++...
T Consensus 197 aTp~g~ 202 (282)
T TIGR01809 197 TVPADV 202 (282)
T ss_pred CCCCCC
Confidence 988654
No 271
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.93 E-value=0.038 Score=50.64 Aligned_cols=79 Identities=16% Similarity=0.229 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcEEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.|.++||+|+ + ++|.+.++.+...|+ +|+.+++++...+.++ +.|....+ |-.+ ..+..+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 5788999998 4 799999988888999 8988887743222222 23433322 3222 2233333433322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 84 ~g~iDilVnnag~ 96 (260)
T PRK06603 84 WGSFDFLLHGMAF 96 (260)
T ss_pred cCCccEEEEcccc
Confidence 379999998873
No 272
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.92 E-value=0.05 Score=45.44 Aligned_cols=94 Identities=22% Similarity=0.152 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE-EEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~-v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
..+.+++|+|+|.+|...++.+...|..+|++.++++++.+.+ ++++... .... .+..+. -+++|+|+
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~Dvvi 86 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY-----LDLEEL-----LAEADLII 86 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee-----cchhhc-----cccCCEEE
Confidence 4578999999999999999988888644899999998876654 4455321 0111 122111 13799999
Q ss_pred EcccChHH----HHHHHHHhccCCceEEEEc
Q 016363 279 ECIGLTSV----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 279 d~~g~~~~----~~~~~~~l~~~~G~~v~~g 305 (390)
.|++.... .......++++ ..++.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~ 116 (155)
T cd01065 87 NTTPVGMKPGDELPLPPSLLKPG-GVVYDVV 116 (155)
T ss_pred eCcCCCCCCCCCCCCCHHHcCCC-CEEEEcC
Confidence 99987652 11222345555 5566664
No 273
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.92 E-value=0.062 Score=49.64 Aligned_cols=72 Identities=19% Similarity=0.066 Sum_probs=52.5
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+...+.+++|+|+|+.+.+++..+..+|+.+|+++.|+++|.+.+.+ ++. ++.+.+ ....+|+
T Consensus 117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~------------~~~~~~---~~~~~dl 181 (272)
T PRK12550 117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGY------------EWRPDL---GGIEADI 181 (272)
T ss_pred cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCC------------cchhhc---ccccCCE
Confidence 345556799999999999999999999999789999999988776644 331 111111 1126899
Q ss_pred EEEcccCh
Q 016363 277 CFECIGLT 284 (390)
Q Consensus 277 vid~~g~~ 284 (390)
||+|++..
T Consensus 182 vINaTp~G 189 (272)
T PRK12550 182 LVNVTPIG 189 (272)
T ss_pred EEECCccc
Confidence 99998743
No 274
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.044 Score=49.23 Aligned_cols=80 Identities=9% Similarity=0.057 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G- 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~- 272 (390)
+|.+++|+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ ++.+.+. .+.-+..+..++.+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 8999999998888999 899999998876544 2334332 221121112233333333221 3
Q ss_pred CccEEEEccc
Q 016363 273 GADYCFECIG 282 (390)
Q Consensus 273 g~D~vid~~g 282 (390)
.+|++|.+.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999986
No 275
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.90 E-value=0.041 Score=50.08 Aligned_cols=81 Identities=21% Similarity=0.324 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh--HHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
++.++||+|+ +++|.+.++.+...|+ +|++++++... .+.+++.+.+. .+..+-.+..++.+.+.+... +++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999998 9999999999999999 89888875432 23334445332 221111112333333433322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++++.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99998874
No 276
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.042 Score=51.91 Aligned_cols=79 Identities=15% Similarity=0.148 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc----C-Cc-EEE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----G-IT-DFI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~----g-~~-~v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.|.+++|+|+ +++|.++++.+...|+ +|+.+++++++.+.+. ++ + .. .++ |-.+ ..+..+.+.++..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 4689999998 9999999998888999 9999999987755432 11 1 11 122 2222 1122222222222
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 379999998874
No 277
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.89 E-value=0.08 Score=49.00 Aligned_cols=94 Identities=18% Similarity=0.247 Sum_probs=66.3
Q ss_pred ccccchhhHHHHHHHHhC-CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~-~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
.+||+....+..+ +..+ --.|.+|+|+|.|. +|.-++.++...|+ +|+...+..
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 4666555444433 4444 34799999999965 99999999999999 888776431
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|..
T Consensus 193 ~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 193 KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 12333333 58999999998864443 467877 888888864
No 278
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.88 E-value=0.051 Score=48.79 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=51.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+.++||+|+ +++|.+.++.+...|+ +|+++++++++ .+.++..+...+ .|..+ ..++.+.+.+... +++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 468999998 9999999998888999 99999987654 334444553321 22222 2334444444332 269999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
+.+.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998874
No 279
>PRK08589 short chain dehydrogenase; Validated
Probab=95.88 E-value=0.037 Score=51.03 Aligned_cols=78 Identities=23% Similarity=0.313 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH-HHHh---cCCc-EE--EcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-IGKK---FGIT-DF--INPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-~~~~---~g~~-~v--~~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.++||+|+ +++|.+.++.+...|+ +|++++++ ++.+ .+.+ .+.. .. .|-.+ ..++.+.+.+...
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 80 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQF 80 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999998888999 99999988 4433 2322 2322 12 22222 2233333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|++.|.
T Consensus 81 g~id~li~~Ag~ 92 (272)
T PRK08589 81 GRVDVLFNNAGV 92 (272)
T ss_pred CCcCEEEECCCC
Confidence 379999998874
No 280
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.88 E-value=0.036 Score=50.54 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-----cCCc--EEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT--DFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~--~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+.++||+|+ |.+|.+.+..+...|+ +|+.++++..+.+.+.+ .+.. ..+..+-.+..++.+.+.+... +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999998 9999999998888899 99999988776543321 2211 2222221111223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++.+.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 281
>PRK08264 short chain dehydrogenase; Validated
Probab=95.88 E-value=0.037 Score=49.67 Aligned_cols=75 Identities=17% Similarity=0.227 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEE--cCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+.++||+|+ |.+|...++.+...|+++|+++++++++.+. .+.. .++ |..+ ..++.+.+.+. +.+|+|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEAA--SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHhc--CCCCEE
Confidence 4678999998 9999999999888998689999988776543 3222 222 2222 12222222221 268999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 998886
No 282
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.88 E-value=0.044 Score=49.90 Aligned_cols=81 Identities=19% Similarity=0.228 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcEE-EcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDF-INPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~v-~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++.+.+.. +..+-.+...+.+.+.+.. .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 9999999999999999 899999988665433 33444322 2111101122222222221 136
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 9999998875
No 283
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.043 Score=51.57 Aligned_cols=81 Identities=14% Similarity=0.158 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-Hhc-----CCc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF-----GIT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~-----g~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.+|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +++ +.. .++..+-.+..++.+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 5689999998 9999999998888899 999999987765432 111 111 1221111011223333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 279999998873
No 284
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.88 E-value=0.041 Score=50.81 Aligned_cols=80 Identities=24% Similarity=0.238 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
++.+++|+|+ |++|.+.++.+...|+ +|+++++++++.+.+. ..+.. ..+..+-.+..++.+.+.+... ++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999999989999 8999999876654332 22332 1222111011223333333222 37
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|++|.+.|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 999999987
No 285
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.87 E-value=0.085 Score=49.74 Aligned_cols=91 Identities=21% Similarity=0.405 Sum_probs=61.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.+|+|+|+|.+|.+.+..++..|. .+|++.++++++.+.+++.|....+. .+..+.+ ..+|+||.|++
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence 579999999999999998888874 38999999999888888877532111 1222222 26899999998
Q ss_pred ChHH---HHHHHHHhccCCceEEEEcc
Q 016363 283 LTSV---MNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 283 ~~~~---~~~~~~~l~~~~G~~v~~g~ 306 (390)
.... +......++++ ..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 7542 22233445555 56666553
No 286
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.86 E-value=0.022 Score=52.73 Aligned_cols=76 Identities=24% Similarity=0.238 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcE-EEcCCCCCCcCHHHHHHhhcCC-CccEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDG-GADYC 277 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~~~i~~~~~~-g~D~v 277 (390)
.+|+++||+|+|+.+.+++.-+...|+++|+++.|+.+|.+.+.+ ++... .+.... +.++... .+|++
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~---------~~~~~~~~~~dli 194 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA---------LADLEGLEEADLL 194 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc---------ccccccccccCEE
Confidence 358999999999999999999999998799999999999777754 33211 011000 0011111 48999
Q ss_pred EEcccChH
Q 016363 278 FECIGLTS 285 (390)
Q Consensus 278 id~~g~~~ 285 (390)
|++++-..
T Consensus 195 INaTp~Gm 202 (283)
T COG0169 195 INATPVGM 202 (283)
T ss_pred EECCCCCC
Confidence 99988544
No 287
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.048 Score=49.32 Aligned_cols=77 Identities=21% Similarity=0.260 Sum_probs=51.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----c--CCc-EEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GIT-DFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~--g~~-~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.. . +.. +++ |..+ ..++.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 468999998 9999998888888898 99999999887655432 1 211 222 2222 2234444443322
Q ss_pred -CCccEEEEccc
Q 016363 272 -GGADYCFECIG 282 (390)
Q Consensus 272 -~g~D~vid~~g 282 (390)
+++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 37999999887
No 288
>PRK09186 flagellin modification protein A; Provisional
Probab=95.85 E-value=0.043 Score=49.86 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc----CCcE--E--EcCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GITD--F--INPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~----g~~~--v--~~~~~~~~~~~~~~i~~~~~ 271 (390)
++.+|||+|+ |.+|...+..+...|+ +|+.+++++++.+.+. ++ +... + .|-.+ ..++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 8999999887765442 22 2221 1 13222 2233333443322
Q ss_pred --CCccEEEEccc
Q 016363 272 --GGADYCFECIG 282 (390)
Q Consensus 272 --~g~D~vid~~g 282 (390)
+++|++|.+.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 36999999885
No 289
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.044 Score=50.61 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=52.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ ++.. ..+..+-.+..++.+.+.+... +++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999998 9999999998888898 89999999887766544 2221 2222111011233333333222 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999885
No 290
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.82 E-value=0.17 Score=48.21 Aligned_cols=96 Identities=15% Similarity=0.111 Sum_probs=66.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHH-HHcCCCeEEEecCChhhHHHHHh-----cCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 199 GVEVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDINPEKFEIGKK-----FGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 199 ~~~~g~~VlI~Gag~vG~~ai~la-~~~g~~~Vi~~~~~~~~~~~~~~-----~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
..+...+++|+|+|..|...+..+ ...++++|.+.++++++.+.+.+ ++.+.. ... ++.+.+.
T Consensus 123 a~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~-----~~~~~~~----- 191 (325)
T PRK08618 123 AREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVN-----SADEAIE----- 191 (325)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeC-----CHHHHHh-----
Confidence 334567899999999998777544 46688899999999988765532 343322 122 3444442
Q ss_pred CccEEEEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 273 g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
.+|+|+.|++..+ .... ..++++ -.++.+|...
T Consensus 192 ~aDiVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 192 EADIIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred cCCEEEEccCCCC-cchH-HhcCCC-cEEEecCCCC
Confidence 6899999999876 3344 888887 7888888654
No 291
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.81 E-value=0.051 Score=49.47 Aligned_cols=81 Identities=21% Similarity=0.366 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++.. ..+..+-.+..++.+.+.+... +++|+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999998 9999999999988999 99999999887665543 3322 1222111112233333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9998873
No 292
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.81 E-value=0.15 Score=43.18 Aligned_cols=87 Identities=20% Similarity=0.248 Sum_probs=59.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
.+|.++|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+..+ .+..+.+. ..|+||-|+..
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~-----~~dvvi~~v~~ 67 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAE-----QADVVILCVPD 67 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHH-----HBSEEEE-SSS
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhh-----cccceEeeccc
Confidence 368899999999999998888999 99999999999999888774332 13344443 36899999888
Q ss_pred hHHHHHHHH------HhccCCceEEEEc
Q 016363 284 TSVMNDAFN------SSREGWGKTVILG 305 (390)
Q Consensus 284 ~~~~~~~~~------~l~~~~G~~v~~g 305 (390)
.......+. .+.++ ..++.++
T Consensus 68 ~~~v~~v~~~~~i~~~l~~g-~iiid~s 94 (163)
T PF03446_consen 68 DDAVEAVLFGENILAGLRPG-KIIIDMS 94 (163)
T ss_dssp HHHHHHHHHCTTHGGGS-TT-EEEEE-S
T ss_pred chhhhhhhhhhHHhhccccc-eEEEecC
Confidence 665555433 34444 5555555
No 293
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.81 E-value=0.21 Score=45.87 Aligned_cols=103 Identities=17% Similarity=0.146 Sum_probs=61.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-------------------hH----HHHHhcCCcE-EEcCCCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KF----EIGKKFGITD-FINPATC 257 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-------------------~~----~~~~~~g~~~-v~~~~~~ 257 (390)
.+.+|+|+|+|++|..++..+...|..+++.++...- |. +.+.++.++. +...+++
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 5678999999999999999999999888888885421 11 1222333332 2212210
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
-. .+.+.++...++|+||||.+....-..+.+.....+-.++..|..
T Consensus 109 i~---~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 IT---PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred cC---hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 01 122333333479999999998653444445544442455656544
No 294
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.12 Score=46.47 Aligned_cols=81 Identities=11% Similarity=0.082 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHH----HHHhcCCc-EEEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
++.++||+|+ |++|...++.+...|+ +|+.+.++.. +.+ .+...+.. ..+..+-.+..++.+.+.+.. .+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5679999998 9999999999999999 7777765433 222 22233432 222221101122333333322 13
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 79999998884
No 295
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.042 Score=50.05 Aligned_cols=81 Identities=20% Similarity=0.203 Sum_probs=52.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH----HHHhcCCcEE---EcCCCCCCcCHHHHHHhhcC-
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE----IGKKFGITDF---INPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~----~~~~~g~~~v---~~~~~~~~~~~~~~i~~~~~- 271 (390)
-.+.+++|+|+ |++|...++.+...|++.|+++++++++.+ .++..+.... +|..+ ...+.+.+.....
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35688999998 999999999999999944999998876654 2233443321 22222 1223333322211
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 379999999884
No 296
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.81 E-value=0.038 Score=50.44 Aligned_cols=79 Identities=20% Similarity=0.230 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---cCCcE-E--EcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-F--INPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++...+...+ .+.+. . .|..+ ..+..+.+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4678999998 9999999999988999 89999987543333332 34332 1 23222 1223333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++.+.|.
T Consensus 84 ~id~lv~nAg~ 94 (260)
T PRK12823 84 RIDVLINNVGG 94 (260)
T ss_pred CCeEEEECCcc
Confidence 79999998873
No 297
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.053 Score=48.80 Aligned_cols=81 Identities=23% Similarity=0.259 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCC-c---EEEcCCCCCCcC---HHHHHHhh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-T---DFINPATCGDKT---VSQVIKEM 269 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~-~---~v~~~~~~~~~~---~~~~i~~~ 269 (390)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. ..+. + .-+|..+....+ +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999998 9999999998888999 8999999987765442 1221 1 112221100112 23333333
Q ss_pred cCCCccEEEEcccC
Q 016363 270 TDGGADYCFECIGL 283 (390)
Q Consensus 270 ~~~g~D~vid~~g~ 283 (390)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999998884
No 298
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.79 E-value=0.064 Score=52.32 Aligned_cols=91 Identities=23% Similarity=0.218 Sum_probs=58.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCC-eEEEecCChhhHHHHHh--cCCc---EEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 206 VAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK--FGIT---DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~--~g~~---~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
|+|+|+|.+|..+++.+....-. +|++.+++.++.+.+.+ .+.. ..+|..+ . +.+.++.. +.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~-~~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----P-ESLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----H-HHHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----H-HHHHHHHh-cCCEEEE
Confidence 78999999999999998877643 89999999999877754 2221 2233322 2 22444433 5699999
Q ss_pred cccChHHHHHHHHHhccCCceEEEE
Q 016363 280 CIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
|+|.......+-.|+..+ -.++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CCccchhHHHHHHHHHhC-CCeecc
Confidence 999765455566666666 677763
No 299
>PRK09242 tropinone reductase; Provisional
Probab=95.79 E-value=0.051 Score=49.48 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c-----CCcE-EE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GITD-FI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~-----g~~~-v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ + +.+. .+ |..+ ..++.+.+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999998 9999999999999999 89999998877654432 1 2221 12 2221 1223333333221
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 379999999985
No 300
>PLN02253 xanthoxin dehydrogenase
Probab=95.78 E-value=0.041 Score=50.89 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCC--c-EEE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--T-DFI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~--~-~v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ .+++. . ..+ |-.+ ...+.+.+.+... +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888899 999999887665433 23321 1 122 2222 1223333333222 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|++.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 301
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.053 Score=49.48 Aligned_cols=79 Identities=20% Similarity=0.231 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-c----CCc-EEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~----g~~-~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
.+.++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ + +.. ..+..+-.+..++.+.+.+. +++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence 4789999998 9999999998888999 99999999877654322 1 322 22221110112222222221 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999998874
No 302
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.77 E-value=0.055 Score=49.25 Aligned_cols=81 Identities=14% Similarity=0.215 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HH----HHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE----IGKKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~----~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ +++|.+.++.+...|+ +|++++++.++ .+ .++..+... .+..+-.+..++.+.+.+... +
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999998 9999999999999999 89999876542 22 223334322 222121112233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|++|.+.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 303
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.76 E-value=0.06 Score=48.91 Aligned_cols=81 Identities=25% Similarity=0.329 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ..+... .+..+-.+..++.+.+.++.. ++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999998 9999999998888999 9999999877654432 223222 221111111223333333222 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++.+.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 304
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.069 Score=48.59 Aligned_cols=75 Identities=21% Similarity=0.274 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++. +.+... .+....+..+- .+. +.+.+.. +++|++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~---~~~-~~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWEC---GKE-ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeC---CCH-HHHHHhc-CCCCEEEE
Confidence 3689999998 9999999999889999 9999988762 222211 11122222111 122 2233322 36999999
Q ss_pred cccC
Q 016363 280 CIGL 283 (390)
Q Consensus 280 ~~g~ 283 (390)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9875
No 305
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.75 E-value=0.055 Score=56.44 Aligned_cols=77 Identities=29% Similarity=0.310 Sum_probs=56.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh---------------------hHHHHHhcCCcEEEcCCCCCCc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. +.++++++|.+..++..-..+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8988887653 4567778888766654321112
Q ss_pred CHHHHHHhhcCCCccEEEEcccCh
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
++.+ +. .++|.||.++|..
T Consensus 388 ~~~~----l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSD----LT-SEYDAVFIGVGTY 406 (639)
T ss_pred CHHH----HH-hcCCEEEEeCCCC
Confidence 2322 21 2699999999964
No 306
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.74 E-value=0.052 Score=49.77 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=49.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ +++|.+.++.+...|+ +|+.+.+++...+.+++ ++....+..+-.+..+..+.+.+... +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999984 5899999998888999 89888765433333322 34322222221112333333433332 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999998874
No 307
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.74 E-value=0.14 Score=42.36 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=28.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
+|+|+|+|++|...+..+...|..++..++..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999888888754
No 308
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.73 E-value=0.055 Score=54.19 Aligned_cols=78 Identities=24% Similarity=0.370 Sum_probs=55.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh---------------------hhHHHHHhcCCcEEEcCCCCCCc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---------------------EKFEIGKKFGITDFINPATCGDK 260 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~~~~ 260 (390)
++++|+|+|+|+.|+.++..++..|. +|+.++..+ ...++++++|.+..++..- ..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v--~~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV--GR 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe--CC
Confidence 67899999999999999999999999 788887654 2456677888876655422 01
Q ss_pred CHHHHHHhhcCCCccEEEEcccChH
Q 016363 261 TVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
++ .+.++. .++|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 11 111211 26999999999754
No 309
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.73 E-value=0.053 Score=49.43 Aligned_cols=81 Identities=14% Similarity=0.211 Sum_probs=50.5
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc--EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Gag---~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.|+++||+|++ ++|.+.++.+...|+ +|+.++++++..+.++++... ..+..+-.+..+..+.+.+... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999874 899999998888999 899998875434444444221 1221111112233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+++++.|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999998873
No 310
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.72 E-value=0.035 Score=51.59 Aligned_cols=95 Identities=17% Similarity=0.058 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
..+.+++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+.+ ++....+.. + .+..+.+ ..+|+||+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEE
Confidence 457789999999999999999999996699999999988766643 332110111 1 0111111 26999999
Q ss_pred cccChHHH-----HHHHHHhccCCceEEEEc
Q 016363 280 CIGLTSVM-----NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 280 ~~g~~~~~-----~~~~~~l~~~~G~~v~~g 305 (390)
|++....- ......+++. ..++++-
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 98865410 1223556665 6666664
No 311
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.72 E-value=0.096 Score=48.72 Aligned_cols=44 Identities=23% Similarity=0.203 Sum_probs=38.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 244 (390)
..+.++||+|+|+.+.+++..+...|+++++++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999999999999999888899889999999998876664
No 312
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.71 E-value=0.051 Score=51.48 Aligned_cols=78 Identities=21% Similarity=0.178 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcC---Cc-EEE--cCCCCCCcCHHHHHHhhc--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---IT-DFI--NPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g---~~-~v~--~~~~~~~~~~~~~i~~~~--~ 271 (390)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++. .. .++ |-.+ ..++.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888898 9999999887765442 232 11 122 2222 122222233321 2
Q ss_pred CCccEEEEccc
Q 016363 272 GGADYCFECIG 282 (390)
Q Consensus 272 ~g~D~vid~~g 282 (390)
+++|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 26999999887
No 313
>PRK07985 oxidoreductase; Provisional
Probab=95.69 E-value=0.13 Score=48.19 Aligned_cols=102 Identities=15% Similarity=0.146 Sum_probs=62.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh--hhHHHH----HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~--~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~ 271 (390)
++.++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+.+ ++.+... .+ |-.+ ..++.+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 5679999998 9999999999888999 888877543 233333 2234322 22 2222 1233333333322
Q ss_pred --CCccEEEEcccChH--------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 272 --GGADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 272 --~g~D~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++|+++.+.|... .++.++..++.+ |+++.++..
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 37999998877310 123444555666 899888753
No 314
>PRK07574 formate dehydrogenase; Provisional
Probab=95.68 E-value=0.11 Score=50.46 Aligned_cols=45 Identities=31% Similarity=0.380 Sum_probs=36.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
.|.+|.|+|.|.+|+..++.++..|. +|++.+++....+..+.++
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 57899999999999999999999999 9999998764444333444
No 315
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.68 E-value=0.061 Score=49.80 Aligned_cols=102 Identities=12% Similarity=0.215 Sum_probs=65.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChh---hHHHH-HhcCCcEEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG-KKFGITDFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~---~~~~~-~~~g~~~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.++++||+|+ +++|.+.++.+...|+ +|+.++++++ +.+.+ .+++....+ |-.+ ...+.+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4789999987 4899999998888999 8999888753 33333 334533332 3222 2233333333322
Q ss_pred -CCccEEEEcccChH-----------------------------HHHHHHHHhccCCceEEEEccc
Q 016363 272 -GGADYCFECIGLTS-----------------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 272 -~g~D~vid~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++|+++++.|... ..+..+..|.+. |+|+.++..
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 37999999988410 134555677777 899888753
No 316
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.67 E-value=0.064 Score=48.81 Aligned_cols=81 Identities=17% Similarity=0.236 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.|.++||+|+ |++|.+.++.+...|+ +|+.+++++. ..+.++..+... .+..+-.+..++.+.+.+... +++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999998 9999999999999999 8888876532 223344444321 222221111233333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999874
No 317
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.66 E-value=0.063 Score=48.82 Aligned_cols=79 Identities=16% Similarity=0.277 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
++.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+.. ..+ |..+ ..++.+.+.+...
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999998 9999999998888899 999999988765443 233422 122 2222 2233333433322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 378999998884
No 318
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.044 Score=49.78 Aligned_cols=75 Identities=16% Similarity=0.230 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++ ...+.. ..+ |..+ ..++.+.+.+... +++|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4789999998 9999999999888999 99999988765 112221 122 2222 1233333333222 3789
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|.+.|.
T Consensus 78 ~vi~~ag~ 85 (252)
T PRK07856 78 VLVNNAGG 85 (252)
T ss_pred EEEECCCC
Confidence 99998873
No 319
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.64 E-value=0.03 Score=55.77 Aligned_cols=93 Identities=14% Similarity=0.110 Sum_probs=61.8
Q ss_pred HHhCCCCCCEEE----EEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVA----IFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~Vl----I~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~ 269 (390)
...++++|+.+| |+|+ |++|.+++|+++.+|+ .|+++...+.+....+..+.+ .+++... ..+.+.+..+
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 456778899888 8876 9999999999999999 999988776654444434444 3444433 2333333322
Q ss_pred cCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 270 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 270 ~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
. ......++.|.++ |+++.++..
T Consensus 103 ~--------------~~~~~~l~~l~~~-griv~i~s~ 125 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPC-GRVVVLGRP 125 (450)
T ss_pred H--------------HHHHHHHHhccCC-CEEEEEccc
Confidence 1 1245566777777 788877754
No 320
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.13 Score=47.54 Aligned_cols=77 Identities=19% Similarity=0.281 Sum_probs=49.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhc-CCCc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMT-DGGA 274 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~-~~g~ 274 (390)
+++++|+|+|++|.+.+..+. .|+ +|+.+++++++.+.+. ..+.+. ++ |-.+ ..++.+.+.+.. -+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 357889999999999888775 798 9999999877654432 223322 22 2222 223333333321 1379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999999985
No 321
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.63 E-value=0.29 Score=38.56 Aligned_cols=74 Identities=23% Similarity=0.294 Sum_probs=55.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 285 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~ 285 (390)
|+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+. .-.+.+++..-..+|.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 6788999999999999999776 899999999999999988854 333222 2344555553348999998888766
No 322
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.071 Score=48.08 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=48.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EE--EcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DF--INPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+.. .. .|-.+ ..++.+.+.+. ....|.++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~-~~~~d~~i~ 77 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD--HPGTKAALSQL-PFIPELWIF 77 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC--HHHHHHHHHhc-ccCCCEEEE
Confidence 47899998 9999998888888899 899999998887766553321 22 22222 22333333332 124677776
Q ss_pred ccc
Q 016363 280 CIG 282 (390)
Q Consensus 280 ~~g 282 (390)
+.|
T Consensus 78 ~ag 80 (240)
T PRK06101 78 NAG 80 (240)
T ss_pred cCc
Confidence 665
No 323
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.16 Score=47.32 Aligned_cols=84 Identities=20% Similarity=0.172 Sum_probs=50.4
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HH----HHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE----IGKKFGITD-FINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~----~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~ 271 (390)
..-++.++||+|+ |.+|...+..+...|+ +|+.+++++++ .+ .++..+.+. ++..+-.+...+.+.+.+...
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~ 120 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR 120 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 3445789999998 9999999998888899 89888877532 22 222234332 222111011223333333221
Q ss_pred --CCccEEEEcccC
Q 016363 272 --GGADYCFECIGL 283 (390)
Q Consensus 272 --~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 121 ~~~~iD~lI~~Ag~ 134 (290)
T PRK06701 121 ELGRLDILVNNAAF 134 (290)
T ss_pred HcCCCCEEEECCcc
Confidence 379999988874
No 324
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.62 E-value=0.32 Score=42.45 Aligned_cols=103 Identities=16% Similarity=0.276 Sum_probs=60.3
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
....+++++++||=+|+| .|..++.+++.. +. +|++++.+++..+.+++ ++.+.+-... .+..+.+..+
T Consensus 33 ~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~-~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~----~d~~~~~~~~ 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKG-RVIAIERDEEVVNLIRRNCDRFGVKNVEVIE----GSAPECLAQL 106 (196)
T ss_pred HHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE----CchHHHHhhC
Confidence 455678899998888763 233444555544 44 99999999988776653 4543221111 1232223222
Q ss_pred cCCCccEE-EEcccC-hHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYC-FECIGL-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~v-id~~g~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
. ..+|.+ ++.... ...++.+.+.|+++ |+++...
T Consensus 107 ~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~ 142 (196)
T PRK07402 107 A-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATA 142 (196)
T ss_pred C-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 2 234444 443322 24477888999998 9988664
No 325
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.61 E-value=0.06 Score=48.58 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.+|||+|+ |.+|...+..+...|+ +|+++++++++...+ +..+.+. ++..+-.+..++.+.+.+... ++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888899 999999987654433 2233221 221111011223333333222 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+||.+.|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 326
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.059 Score=49.86 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+. ..+.+. .+..+-.+..++.+.+.+... ++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4788999998 9999999999888999 8999998877655432 234322 121111011223333332221 36
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 327
>PRK06720 hypothetical protein; Provisional
Probab=95.59 E-value=0.086 Score=45.05 Aligned_cols=81 Identities=22% Similarity=0.187 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
.+.+++|+|+ +++|...+..+...|+ +|+.++++.+..+.. .+.+... .+..+-.+..++.+.+.+.. -++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5779999998 8999999998888898 999999887655332 2234332 22222101122222222221 136
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|+++++.|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8888888773
No 328
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.59 E-value=0.059 Score=48.83 Aligned_cols=78 Identities=22% Similarity=0.355 Sum_probs=51.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE-EE--cCCCCCCcCHHHHHHhhc--CC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FI--NPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~-v~--~~~~~~~~~~~~~i~~~~--~~ 272 (390)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.. .+... .+ |..+ ..++.+.+.+.. .+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 357999998 9999999998888999 99999998877655533 23221 22 2222 223333333332 12
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+||.+.+.
T Consensus 78 ~~d~vi~~a~~ 88 (255)
T TIGR01963 78 GLDILVNNAGI 88 (255)
T ss_pred CCCEEEECCCC
Confidence 69999988764
No 329
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.064 Score=48.81 Aligned_cols=80 Identities=15% Similarity=0.215 Sum_probs=50.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCc--EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT--DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~--~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ +... ..+..+-.+..++.+.+.+... +++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999998 9999999988888898 89999998887654432 3211 1221111011223333333222 26999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9999874
No 330
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.067 Score=48.88 Aligned_cols=81 Identities=23% Similarity=0.295 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh---cCCcE-EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.+.++||+|+ |.+|...++.+...|+ +|+.++++++..+...+ .+... .+..+-.+..++.+.+.+... +.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999998 9999999998888999 89999988754433332 23221 221111011223333333222 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999998884
No 331
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.54 E-value=0.072 Score=49.20 Aligned_cols=83 Identities=16% Similarity=0.256 Sum_probs=51.0
Q ss_pred CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCCh---hhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcC-
Q 016363 200 VEVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 200 ~~~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~---~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
+-.+.++||+|+ +++|.+.++.+...|+ +|+.+.+++ ++.+.+ ++++....+..+-.+..+..+.+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 445789999987 5899999999989999 898887764 333333 3345322222221112233333333322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 86 ~g~iD~lv~nAG~ 98 (272)
T PRK08159 86 WGKLDFVVHAIGF 98 (272)
T ss_pred cCCCcEEEECCcc
Confidence 379999998873
No 332
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.53 E-value=0.068 Score=48.44 Aligned_cols=76 Identities=14% Similarity=0.210 Sum_probs=51.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcE-EE--cCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FI--NPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
+|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.. ++.+. .+ |-.+ ..++.+.+.+... +++|.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 6899998 9999999999988999 99999999887766543 44332 12 2222 1233333333322 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 998874
No 333
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.52 E-value=0.067 Score=48.06 Aligned_cols=81 Identities=17% Similarity=0.268 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.+++|+|+ |.+|...+..+...|+ +|+++++++++.+.+ +..+... ++..+-.+..++.+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888999 999999988765443 2233222 222221112233333443322 37
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 9999998874
No 334
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.52 E-value=0.093 Score=48.31 Aligned_cols=105 Identities=16% Similarity=0.259 Sum_probs=72.9
Q ss_pred HHHHHHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEE--cCCCCCCc
Q 016363 190 GVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFI--NPATCGDK 260 (390)
Q Consensus 190 A~~~l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~--~~~~~~~~ 260 (390)
++..+.+..++++|++||=+|+|- |.+++-+|+..|+ +|++++-|++..+.+++ .|.. .+. ++.+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd---- 133 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD---- 133 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc----
Confidence 444566889999999999999853 5566777888899 99999999998776644 4543 111 2221
Q ss_pred CHHHHHHhhcCCCccEEE-----EcccCh---HHHHHHHHHhccCCceEEEEcccCCC
Q 016363 261 TVSQVIKEMTDGGADYCF-----ECIGLT---SVMNDAFNSSREGWGKTVILGVEMHG 310 (390)
Q Consensus 261 ~~~~~i~~~~~~g~D~vi-----d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~~~ 310 (390)
.. +.||-|+ +.+|.. .-++.+.+.|+++ |++.+.......
T Consensus 134 --------~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 --------FE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred --------cc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11 2477774 455542 2367788899999 999888765543
No 335
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.076 Score=47.44 Aligned_cols=74 Identities=16% Similarity=0.223 Sum_probs=49.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcEE-EcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+ ..++.+.+.+.. +++|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~-~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLFP-HHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHHh-hcCcEEEECC
Confidence 5899998 9999999999888999 999999998877655 33444332 22222 122333333322 3689999886
Q ss_pred c
Q 016363 282 G 282 (390)
Q Consensus 282 g 282 (390)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 5
No 336
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.47 E-value=0.04 Score=46.43 Aligned_cols=80 Identities=24% Similarity=0.235 Sum_probs=49.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC--hhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN--PEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~--~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
+++||+|+ +++|.+.++.+...|..+|+.+.++ .++.+.+ +..+... ++..+-.+..++...+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899998 9999998888887777688899988 4444333 3345322 22221111123333343333 237
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998886
No 337
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.47 E-value=0.23 Score=44.82 Aligned_cols=105 Identities=19% Similarity=0.188 Sum_probs=60.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhH----HHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKF----EIGKKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~----~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ |.+|...++-+...|+ +|+.+.++ .++. ..+++.+... .+..+-.+..++.+.+.++.. +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 3678999998 9999999988888999 77766543 2222 2223344321 221111011223333333322 3
Q ss_pred CccEEEEcccChH-------------------------HHHHHHHHhccCCceEEEEcccC
Q 016363 273 GADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 273 g~D~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++|++|.+.|... ..+.+.+.++.. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 7999999998300 123445566666 8999888543
No 338
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.47 E-value=0.084 Score=47.74 Aligned_cols=84 Identities=19% Similarity=0.204 Sum_probs=53.5
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc--EEE--cCCCCCCcCHHHHHHhh
Q 016363 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT--DFI--NPATCGDKTVSQVIKEM 269 (390)
Q Consensus 199 ~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~--~v~--~~~~~~~~~~~~~i~~~ 269 (390)
...++.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+.. .++ +....+..++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3557889999998 9999999998888899 999999988765433 233322 122 22110112333333333
Q ss_pred cC--CCccEEEEcccC
Q 016363 270 TD--GGADYCFECIGL 283 (390)
Q Consensus 270 ~~--~g~D~vid~~g~ 283 (390)
.. +.+|.+|.+.+.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 269999988764
No 339
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.47 E-value=0.26 Score=42.85 Aligned_cols=98 Identities=15% Similarity=0.144 Sum_probs=59.7
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
..++++++||-+|+| .|..++.+++.. +. +|++++.+++..+.+++ .+.+.+ .... .+..+ +. . .+
T Consensus 41 ~~l~~g~~VLDiGcG-tG~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~-~~-~-~~ 111 (187)
T PRK00107 41 PYLPGGERVLDVGSG-AGFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE-FG-Q-EE 111 (187)
T ss_pred hhcCCCCeEEEEcCC-CCHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh-CC-C-CC
Confidence 345668999999874 234444444444 45 99999999987766643 444322 1111 12222 11 1 23
Q ss_pred CccEEEEcccC--hHHHHHHHHHhccCCceEEEEc
Q 016363 273 GADYCFECIGL--TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 273 g~D~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+|+|+..... ...++.+.+.|+++ |+++.+-
T Consensus 112 ~fDlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 112 KFDVVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred CccEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 89999953322 23467788999999 9988763
No 340
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.46 E-value=0.11 Score=47.98 Aligned_cols=92 Identities=15% Similarity=0.081 Sum_probs=59.7
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcC---CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g---~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
...+.+++|+|+|++|.+++..+...|+ +|+++.+++++.+.+. .+. ....+. +.+ .....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~--------~~~----~~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS--------MDE----LPLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec--------hhh----hcccCcc
Confidence 3457899999999999999988888898 9999999988765543 332 112211 111 1113699
Q ss_pred EEEEcccChHH--H---HHHHHHhccCCceEEEEc
Q 016363 276 YCFECIGLTSV--M---NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 276 ~vid~~g~~~~--~---~~~~~~l~~~~G~~v~~g 305 (390)
+||+|++.... . ......++++ ..++.+.
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~ 214 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMV 214 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEec
Confidence 99999986421 1 1123456665 5666664
No 341
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.45 E-value=0.081 Score=47.59 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
++.++||+|+ |.+|...++.+...|+ .|+..+++.++.+.+. .++.. .++..+-.+...+.+.+.+... +++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4679999998 9999999998888998 8988888877766553 34432 2222111011223332222221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999884
No 342
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.44 E-value=0.21 Score=44.29 Aligned_cols=107 Identities=19% Similarity=0.200 Sum_probs=73.5
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCcEE-EcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDF-INPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~~v-~~~~~~~~~~~~~~i~ 267 (390)
|...++.+...+||=+|. .+|..++.+|..+. -.+++.++.++++.+.+++ .|.+.. .-... .+..+.+.
T Consensus 51 L~~L~~~~~~k~iLEiGT-~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~---gdal~~l~ 126 (219)
T COG4122 51 LRLLARLSGPKRILEIGT-AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG---GDALDVLS 126 (219)
T ss_pred HHHHHHhcCCceEEEeec-ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec---CcHHHHHH
Confidence 345567778888988875 35777788888775 3389999999999887764 565442 21110 25566666
Q ss_pred hhcCCCccEEE-EcccC--hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+...+.||.|| |+--. +..++.+++.|+++ |.++.--
T Consensus 127 ~~~~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN 166 (219)
T COG4122 127 RLLDGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADN 166 (219)
T ss_pred hccCCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence 63345899997 55443 34578999999998 8887544
No 343
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.42 E-value=0.088 Score=48.38 Aligned_cols=80 Identities=14% Similarity=0.180 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g--~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ + ++|.+.++.+...|+ +|+.+++++.-.+.+++ .+....+..+-.+..++.+.+.+... +
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 4789999998 4 799999998888999 89888876321222322 22222222111112233333433322 3
Q ss_pred CccEEEEccc
Q 016363 273 GADYCFECIG 282 (390)
Q Consensus 273 g~D~vid~~g 282 (390)
.+|++|++.|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6999999987
No 344
>PLN00203 glutamyl-tRNA reductase
Probab=95.40 E-value=0.088 Score=53.13 Aligned_cols=73 Identities=15% Similarity=0.234 Sum_probs=53.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cC-CcE-EEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-ITD-FINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g-~~~-v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+.+ ++ ... +...+ ++.+.+ ..+|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~-----dl~~al-----~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD-----EMLACA-----AEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh-----hHHHHH-----hcCCEEEE
Confidence 6899999999999999999999998789999999988776654 53 221 11111 222222 26999999
Q ss_pred cccChH
Q 016363 280 CIGLTS 285 (390)
Q Consensus 280 ~~g~~~ 285 (390)
|++...
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 987655
No 345
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.39 E-value=0.11 Score=47.05 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=30.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
+.+|+|+|+|++|..+++.+...|..+++.++..
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3789999999999999999999999888888754
No 346
>PLN03139 formate dehydrogenase; Provisional
Probab=95.38 E-value=0.13 Score=49.90 Aligned_cols=45 Identities=22% Similarity=0.259 Sum_probs=36.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g 247 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.+++....+...+.|
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g 242 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETG 242 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcC
Confidence 57899999999999999999999999 9999998754444444444
No 347
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.38 E-value=0.083 Score=48.09 Aligned_cols=100 Identities=12% Similarity=0.088 Sum_probs=61.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC--CcEE-EcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDF-INPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g--~~~v-~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+.+|||+|+ |.+|...++.+...|. +|+++.+++++.......+ ...+ .|..+ . .+.+.+....++|+|
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~~~~d~v 89 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIGDDSDAV 89 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhhcCCCEE
Confidence 4679999998 9999999998888898 8999999887754332211 2222 12221 1 122323222279999
Q ss_pred EEcccChH-------------HHHHHHHHhccC-CceEEEEccc
Q 016363 278 FECIGLTS-------------VMNDAFNSSREG-WGKTVILGVE 307 (390)
Q Consensus 278 id~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 307 (390)
|.+.|... ....+++.+... .++++.++..
T Consensus 90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 98876421 123445555443 1578887753
No 348
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.37 E-value=0.14 Score=47.76 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
..+.+++|+|+|++|.+++..+...|+++|+++.|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999999888899996799999986
No 349
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.36 E-value=0.46 Score=35.98 Aligned_cols=85 Identities=18% Similarity=0.285 Sum_probs=56.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEE-EecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 205 TVAIFGLGAVGLAVAEGARLNR---ASKII-GVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g---~~~Vi-~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
+|.|+|+|.+|.+.+.-+...| . +|+ +..+++++.+.+. +++..... .+..+.++ ..|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ-----EADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH-----HTSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc-----cCCEEEE
Confidence 5788899999999999888888 6 788 4499999987774 46643322 13444444 3899999
Q ss_pred cccChHHHHHHHHHh---ccCCceEEEE
Q 016363 280 CIGLTSVMNDAFNSS---REGWGKTVIL 304 (390)
Q Consensus 280 ~~g~~~~~~~~~~~l---~~~~G~~v~~ 304 (390)
|+.-.. +...++.+ .++ ..++++
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 999776 55544444 334 455544
No 350
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.061 Score=48.12 Aligned_cols=74 Identities=16% Similarity=0.163 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcCC-CccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~-g~D~vi 278 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++. +... ...|..+ ...+.+.+.+.... +.|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD--IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence 3578999998 9999999999889998 999999887651 2211 1122222 22334444444333 789999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98874
No 351
>PRK00811 spermidine synthase; Provisional
Probab=95.36 E-value=0.11 Score=48.30 Aligned_cols=96 Identities=19% Similarity=0.174 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC------C--c---EEEcCCCCCCcCHHHHHHhh
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG------I--T---DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g------~--~---~v~~~~~~~~~~~~~~i~~~ 269 (390)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.++++- . + .++. .|..+.+..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4567999998854 666667777767669999999998888777631 1 1 1221 233334433
Q ss_pred cCCCccEEEEcccC----------hHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCFECIGL----------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+.+|+||--... ...++.+.+.|+++ |.++.-.
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 34489999843211 12246778999998 9988653
No 352
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.24 Score=44.93 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=30.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~ 240 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.+. +++++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4679999998 9999999999999999 787764 444443
No 353
>PRK06849 hypothetical protein; Provisional
Probab=95.35 E-value=0.32 Score=47.44 Aligned_cols=95 Identities=13% Similarity=-0.030 Sum_probs=60.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCcEEEcCCCCCCcCHHHHHHhhcCC-CccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDFINPATCGDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~~v~~~~~~~~~~~~~~i~~~~~~-g~D~vi 278 (390)
...+|||+|+ .+.|+..++.++..|. +|++++.++......... .....+.....+...+.+.+.++... ++|++|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI 81 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI 81 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 3578999998 6799999999999999 999999886554322221 11122322221234577777777666 899999
Q ss_pred EcccChHHHHHHHHHhccC
Q 016363 279 ECIGLTSVMNDAFNSSREG 297 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~~ 297 (390)
-+......+......+.+.
T Consensus 82 P~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 82 PTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred ECChHHHhHHhhhhhhcCC
Confidence 7776432233333445443
No 354
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.33 E-value=0.058 Score=48.02 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=64.6
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI 266 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i 266 (390)
+.+...++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.+++ .|.+. ++.. +..+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~------d~~~~~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG------DGTQGW 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC------CcccCC
Confidence 3466789999999999875 35555667776542 269999999887766643 44332 2221 111111
Q ss_pred HhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
...+.||+|+-..........+.+.|+++ |+++..
T Consensus 142 --~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 --EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred --cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 01137999985544444467788999998 998754
No 355
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.32 E-value=0.13 Score=48.56 Aligned_cols=87 Identities=15% Similarity=0.206 Sum_probs=55.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++++.. +...+.. . .++.+.+. ..|+|+.+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~-~----~~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAG-R----EELSAFLS-----QTRVLINLL 198 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeecc-c----ccHHHHHh-----cCCEEEECC
Confidence 57899999999999999999999999 9999987654321 1111110 0 12333322 467777666
Q ss_pred cChHHH-----HHHHHHhccCCceEEEEc
Q 016363 282 GLTSVM-----NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~~-----~~~~~~l~~~~G~~v~~g 305 (390)
+..... ...++.|+++ ..+|.+|
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~a 226 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLA 226 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECC
Confidence 643322 2345566666 6666665
No 356
>PLN02366 spermidine synthase
Probab=95.32 E-value=0.11 Score=48.78 Aligned_cols=98 Identities=18% Similarity=0.214 Sum_probs=63.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CC------c---EEEcCCCCCCcCHHHHHHhh
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI------T---DFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~------~---~v~~~~~~~~~~~~~~i~~~ 269 (390)
....++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.++++ .. + .++. .|..+.+++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~ 161 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA 161 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence 45678999998865 55666778876666899999888877777663 11 1 1111 2333344443
Q ss_pred cCCCccEEE-EcccC---------hHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.++.+|+|| |+... ...++.+.+.|+++ |.++.-+
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 344899998 43321 12366788999999 9987654
No 357
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.31 E-value=0.087 Score=47.31 Aligned_cols=71 Identities=13% Similarity=0.136 Sum_probs=51.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh--hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
|+|+|+ |.+|...++.+...+. +|.+++|++. ..+.++..|+..+. .+- +-.+.+.+... |+|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~-~d~----~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVE-ADY----DDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEE-S-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEee-ccc----CCHHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999998888 8999999874 35667778886543 221 11233333332 7999999888
Q ss_pred C
Q 016363 283 L 283 (390)
Q Consensus 283 ~ 283 (390)
.
T Consensus 74 ~ 74 (233)
T PF05368_consen 74 P 74 (233)
T ss_dssp C
T ss_pred c
Confidence 3
No 358
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.31 E-value=0.085 Score=48.08 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ |++|.+.++.+...|+ +|++++++ ++.+.+ .+.+.+ ..+..+-.+...+.+.+.+... ++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999999999 89998877 333222 233432 2222221011223333333322 36
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 359
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.30 E-value=0.086 Score=55.21 Aligned_cols=78 Identities=28% Similarity=0.307 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh---------------------hHHHHHhcCCcEEEcCCCCCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~~g~~~v~~~~~~~~ 259 (390)
..+.+|+|+|+|+.|++++..+...|+ +|+++++.+. ..+.++++|.+...+..-..+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 358899999999999999999999999 8998886543 345566777654443221001
Q ss_pred cCHHHHHHhhcCCCccEEEEcccCh
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
-++.+ +. .++|.||.++|..
T Consensus 404 i~~~~-~~----~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLES-LL----EDYDAVFVGVGTY 423 (654)
T ss_pred CCHHH-HH----hcCCEEEEeCCCC
Confidence 12211 11 2699999988863
No 360
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.30 E-value=0.089 Score=47.87 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.+|||+|+ +++|...+..+...|+ +|+.++++.++.+.+ +..+.+ .++ |..+ ..++.+.+.....
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999998888999 899998887765443 223332 222 2222 1223333333222
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 361
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.29 E-value=0.14 Score=48.88 Aligned_cols=36 Identities=31% Similarity=0.251 Sum_probs=31.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.+.+|+|+|+|++|..++..+...|..+++.++...
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 346899999999999999999999998888888753
No 362
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.26 E-value=0.075 Score=46.62 Aligned_cols=99 Identities=16% Similarity=0.238 Sum_probs=60.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
+.....++.+||-+|+|. |..++.+++. |. +|++++.+++-++.+++ .+...+ .... .++.+. .+ +
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~~--~~-~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNNL--TF-D 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhhC--Cc-C
Confidence 445566778999999864 6667777764 77 99999999987666544 222211 1110 122111 11 2
Q ss_pred CCccEEEEcccC--------hHHHHHHHHHhccCCceEEEEc
Q 016363 272 GGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 272 ~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.+|+|+.+..- ...+..+.+.|+++ |.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 379999875431 12356777889999 9865543
No 363
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.25 E-value=0.093 Score=47.73 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHHHhcCCcEE-EcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.++ ++..+.++..+...+ .|-.+ ..++.+.+.+... +++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4688999998 9999999999888999 78776544 334444444333222 22222 2233333333322 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998875
No 364
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.24 E-value=0.26 Score=45.85 Aligned_cols=138 Identities=20% Similarity=0.278 Sum_probs=79.4
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHH-hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~-~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
+|.+|..-....++++.+++.| +......|++. +.-. ..+++|.+||=+|+| .|.+++. |..+|+.+|++++
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAF----GTG~HpTT~lc-L~~Le~~~~~g~~vlDvGcG-SGILaIA-a~kLGA~~v~g~D 192 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAF----GTGTHPTTSLC-LEALEKLLKKGKTVLDVGCG-SGILAIA-AAKLGAKKVVGVD 192 (300)
T ss_pred CCccCCCCCCceEEEEcccccc----CCCCChhHHHH-HHHHHHhhcCCCEEEEecCC-hhHHHHH-HHHcCCceEEEec
Confidence 3555433223566777666644 34445555554 3222 346799999999984 2444433 3456887899999
Q ss_pred CChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChH---HHHHHHHHhccCCceEEEEccc
Q 016363 235 INPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS---VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 235 ~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
..+--.+.+++ -+.+..+.... .........+.+|+|+-..=... ...++.+.++++ |++++.|..
T Consensus 193 iDp~AV~aa~eNa~~N~v~~~~~~~~------~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 193 IDPQAVEAARENARLNGVELLVQAKG------FLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred CCHHHHHHHHHHHHHcCCchhhhccc------ccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 98876666654 22221110000 00111122248999996553322 245677899998 999988854
No 365
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.24 E-value=0.076 Score=55.74 Aligned_cols=115 Identities=20% Similarity=0.232 Sum_probs=67.2
Q ss_pred cceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC
Q 016363 157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 157 ~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
..+|+-+++...|.+ +-.+++++=.-.++ ....-.+.++||+|+ |++|.+.++.+...|+ +|+++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r 446 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL 446 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence 455666666666665 44444444221100 011124789999998 9999999998888999 9999999
Q ss_pred ChhhHHHHHh-----cCCc--EEEcCCCCCCcCHHHHHHhhcC--CCccEEEEcccC
Q 016363 236 NPEKFEIGKK-----FGIT--DFINPATCGDKTVSQVIKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 236 ~~~~~~~~~~-----~g~~--~v~~~~~~~~~~~~~~i~~~~~--~g~D~vid~~g~ 283 (390)
+.++.+.+.+ .+.. ..+..+-.+..++.+.+.+... +++|++|++.|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 8876654421 2321 1221111111233333333322 379999999884
No 366
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=95.23 E-value=0.11 Score=48.66 Aligned_cols=75 Identities=17% Similarity=0.241 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH---HHHhcC-Cc---EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE---IGKKFG-IT---DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~---~~~~~g-~~---~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
.+.+|+|+|| |-+|...+..+...|+ +|.+++|++++.+ .++++. +. .++..+=.++..|.+++. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-----C
Confidence 5689999999 9999999999999999 9999999998743 466654 22 222222111234544443 7
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
.|.||.+..
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 999997655
No 367
>PRK08317 hypothetical protein; Provisional
Probab=95.21 E-value=0.24 Score=44.32 Aligned_cols=102 Identities=22% Similarity=0.346 Sum_probs=68.2
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHhc----CCc-EEEcCCCCCCcCHHHHHH
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIK 267 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~~~i~ 267 (390)
+.+...+.++++||-+|+|. |..+..++...+ ..++++++.+++..+.+++. +.. .++..+. ..+
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 34667889999999999975 888888888773 23899999999888877654 111 1121111 111
Q ss_pred hhcCCCccEEEEcc-----cC-hHHHHHHHHHhccCCceEEEEc
Q 016363 268 EMTDGGADYCFECI-----GL-TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 268 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+..+.+|+|+... .. ...+..+.+.|+++ |.++...
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 12234799987532 22 22467889999999 9988765
No 368
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.14 Score=46.15 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=49.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----c-CCc-EEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F-GIT-DFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~-g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ . +.. .++..+-.+..++.+.+.+. ...+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL-PALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-hhcCCE
Confidence 47999998 9999999998888999 99999999877654321 1 111 22222111122333333332 125799
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
++.+.|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9988774
No 369
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.20 E-value=0.092 Score=42.94 Aligned_cols=98 Identities=21% Similarity=0.170 Sum_probs=57.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-------------------hhHH----HHHhcCCc-EEEcCCCCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFE----IGKKFGIT-DFINPATCG 258 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~----~~~~~g~~-~v~~~~~~~ 258 (390)
..+|+|+|+|++|...+..+...|..+++.++... .|.+ .++++.+. .+.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 46899999999999999999999998898888432 1222 22233222 2221111
Q ss_pred CcCH-HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 259 DKTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 259 ~~~~-~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+ .+.+.++. +++|+||+|+........+.+.++..+-.++..+
T Consensus 80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 12 12222222 2789999999987744455555555513344444
No 370
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.098 Score=48.28 Aligned_cols=81 Identities=14% Similarity=0.010 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~g 273 (390)
+..++||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ...+... ++..+-.+..++.+.+.+.. -++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3458999998 9999999998888899 899998887665433 2234332 22222211222333333321 137
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999998875
No 371
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.20 E-value=0.092 Score=51.31 Aligned_cols=106 Identities=15% Similarity=0.203 Sum_probs=62.7
Q ss_pred hCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH-------HHHhc-CCcEE-EcCCCCCCcCHHHHHH
Q 016363 198 AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-------IGKKF-GITDF-INPATCGDKTVSQVIK 267 (390)
Q Consensus 198 ~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~-------~~~~~-g~~~v-~~~~~~~~~~~~~~i~ 267 (390)
..-..+.+|||+|+ |.+|..+++.+...|. +|++++++..+.+ ..... +...+ .|..+ ..++.+.+.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~ 131 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLF 131 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHH
Confidence 44566789999998 9999999998888899 9999998875432 11112 22222 12222 122333333
Q ss_pred hhcCCCccEEEEcccChH------------HHHHHHHHhccCC-ceEEEEccc
Q 016363 268 EMTDGGADYCFECIGLTS------------VMNDAFNSSREGW-GKTVILGVE 307 (390)
Q Consensus 268 ~~~~~g~D~vid~~g~~~------------~~~~~~~~l~~~~-G~~v~~g~~ 307 (390)
+. +.++|+||+|.+... ....+++.+...+ ++++.++..
T Consensus 132 ~~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 132 SE-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred Hh-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 22 116999999886421 1223444444431 467777643
No 372
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.19 E-value=0.22 Score=47.56 Aligned_cols=37 Identities=30% Similarity=0.412 Sum_probs=33.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.++++..
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 99999987654
No 373
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.18 E-value=0.17 Score=45.42 Aligned_cols=80 Identities=23% Similarity=0.258 Sum_probs=59.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh--cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK--FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~--~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.++|+|+|.+|...++.+...|. .|+++++++++.+.... ++...+. .+. .-.+.++++--..+|+++-++|
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~-gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVI-GDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEE-ecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 58899999999999999999999 99999999999777433 5544333 222 3345566653348999999999
Q ss_pred ChHHHHHHH
Q 016363 283 LTSVMNDAF 291 (390)
Q Consensus 283 ~~~~~~~~~ 291 (390)
... .+..+
T Consensus 76 ~d~-~N~i~ 83 (225)
T COG0569 76 NDE-VNSVL 83 (225)
T ss_pred CCH-HHHHH
Confidence 866 44333
No 374
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.18 E-value=0.23 Score=44.65 Aligned_cols=99 Identities=17% Similarity=0.102 Sum_probs=58.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-------------------hhHH----HHHhcCCcEEEcCCCCCC
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFE----IGKKFGITDFINPATCGD 259 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~----~~~~~g~~~v~~~~~~~~ 259 (390)
..+|+|+|+|++|..++..+...|..+++.++... .|.+ .++++.++.-+...+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~--- 97 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN--- 97 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec---
Confidence 57899999999999999999999998888886432 1222 223344332222211
Q ss_pred cCH-HHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 260 KTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 260 ~~~-~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
..+ .+.+.++. .++|+||+|+.+......+.+.....+-.++..|
T Consensus 98 ~~i~~~~~~~~~-~~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g 143 (228)
T cd00757 98 ERLDAENAEELI-AGYDLVLDCTDNFATRYLINDACVKLGKPLVSGA 143 (228)
T ss_pred ceeCHHHHHHHH-hCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 112 12222222 2699999999987744334444444413344444
No 375
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.075 Score=48.44 Aligned_cols=74 Identities=16% Similarity=0.255 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEE--cCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
+|.++||+|+ |++|...++.+...|+ +|+++++++.+. .+.. ..+ |-.+ ..++.+.+.++.. +++|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 79 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTT--AEGCAAVARAVLERLGGVD 79 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCC--HHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999998888999 899999876542 1111 112 2222 1222222222222 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
++|++.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK06523 80 ILVHVLGG 87 (260)
T ss_pred EEEECCcc
Confidence 99998873
No 376
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.28 Score=44.40 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHH-Hhc---CCc-EEEcCCCCCCcCHHHHHHhhc----
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG-KKF---GIT-DFINPATCGDKTVSQVIKEMT---- 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~-~~~---g~~-~v~~~~~~~~~~~~~~i~~~~---- 270 (390)
.+.+++|+|+ |.+|...++.+...|+ +|+++ .++.++.+.+ ..+ +.. .++..+-.+..++.+.+.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 3578999998 9999999998888898 77664 6666554322 222 222 122211111223333333321
Q ss_pred ---C-CCccEEEEcccC
Q 016363 271 ---D-GGADYCFECIGL 283 (390)
Q Consensus 271 ---~-~g~D~vid~~g~ 283 (390)
+ +++|++|.+.|.
T Consensus 84 ~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 84 IRVGTSEIDILVNNAGI 100 (254)
T ss_pred cccCCCCccEEEECCCC
Confidence 1 269999998875
No 377
>PRK06484 short chain dehydrogenase; Validated
Probab=95.15 E-value=0.085 Score=53.55 Aligned_cols=79 Identities=15% Similarity=0.257 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcCCcE---EEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD---FINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g~~~---v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
++.++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++... .+|-.+ ..++.+.+.+... +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5789999998 9999999999999999 999999988876554 4455432 123222 2233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998874
No 378
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=95.14 E-value=0.09 Score=50.43 Aligned_cols=77 Identities=12% Similarity=0.078 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-HhcC--Cc-EEEcCCCCCCcCHHHHHHhhcCC-Ccc
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFG--IT-DFINPATCGDKTVSQVIKEMTDG-GAD 275 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~~g--~~-~v~~~~~~~~~~~~~~i~~~~~~-g~D 275 (390)
+|.+|||+|+ |.+|..+++.+...|. +|+++++++...... ..++ .. ..+..+- .+ .+.+.++..+ ++|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~~~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDI---RD-AAKLRKAIAEFKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccC---CC-HHHHHHHHhhcCCC
Confidence 4689999998 9999999999999998 899998876543322 2222 11 1121111 11 2234444444 789
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||.+.+.
T Consensus 78 ~vih~A~~ 85 (349)
T TIGR02622 78 IVFHLAAQ 85 (349)
T ss_pred EEEECCcc
Confidence 99998873
No 379
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=95.14 E-value=0.39 Score=41.46 Aligned_cols=38 Identities=26% Similarity=0.330 Sum_probs=31.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
+|.|+|+|.+|...+.++...|. +|+..+.+++.++..
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~ 38 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERA 38 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhh
Confidence 58899999999999988888899 999999999876654
No 380
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.14 E-value=0.17 Score=46.08 Aligned_cols=35 Identities=23% Similarity=0.348 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|..++..+...|..+++.++..
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45789999999999999999999999888888744
No 381
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.13 Score=47.81 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=50.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh---------hhHHHH----HhcCCcE-EEcCCCCCCcCHHHH
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFEIG----KKFGITD-FINPATCGDKTVSQV 265 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~---------~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~ 265 (390)
-++.++||+|+ +++|.+.++.+...|+ +|++++++. ++.+.+ +..+... .+..+-.+..++.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 46789999998 9999999998888999 888887654 333222 2233332 221111111223333
Q ss_pred HHhhcC--CCccEEEEcccC
Q 016363 266 IKEMTD--GGADYCFECIGL 283 (390)
Q Consensus 266 i~~~~~--~g~D~vid~~g~ 283 (390)
+.+... +++|++|++.|.
T Consensus 83 ~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHhcCCCCEEEECCCC
Confidence 333322 379999998874
No 382
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.10 E-value=0.12 Score=47.34 Aligned_cols=81 Identities=23% Similarity=0.300 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+.++||+|+ +++|...+..+...|+ +|+.+++++++.+.+. ..+.+. .+..+-.+...+.+.+.+... ++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5678999998 9999998888888899 8999998887654432 234332 222211111223333333222 36
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 9999998885
No 383
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.09 E-value=0.58 Score=43.63 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=33.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHH
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~ 242 (390)
.+|.|+|+|.+|...++.+...|. .|+..+++++..+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 379999999999998888888899 99999999998766
No 384
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.08 E-value=0.16 Score=48.52 Aligned_cols=35 Identities=34% Similarity=0.300 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|..+++.+...|..++..++..
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34789999999999999999999999899999975
No 385
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.12 Score=47.65 Aligned_cols=79 Identities=23% Similarity=0.277 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-------HH----HHHhcCCcE-E--EcCCCCCCcCHHHHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-------FE----IGKKFGITD-F--INPATCGDKTVSQVI 266 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-------~~----~~~~~g~~~-v--~~~~~~~~~~~~~~i 266 (390)
.+.++||+|+ |++|...++.+...|+ +|++++++.++ ++ .++..+.+. . .|..+ ...+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 4678999998 9999999998888999 99999987542 11 122334332 2 23222 22233333
Q ss_pred HhhcC--CCccEEEEcccC
Q 016363 267 KEMTD--GGADYCFECIGL 283 (390)
Q Consensus 267 ~~~~~--~g~D~vid~~g~ 283 (390)
.+... +.+|++|.+.|.
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 33221 379999998884
No 386
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.07 E-value=1 Score=40.25 Aligned_cols=93 Identities=13% Similarity=0.029 Sum_probs=58.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
++.+|||+|+|.++.-=+..+...|+ +|.+++..-. .+..+...|.-..+ ..+ +... ++ .++++||-+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~-----~~~~--dl--~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGN-----YDKE--FI--KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCC-----CChH--Hh--CCCcEEEEC
Confidence 46789999999999998888888999 8888875532 23333223322222 122 2111 11 379999999
Q ss_pred ccChHHHHHHH-HHhccCCceEEEEccc
Q 016363 281 IGLTSVMNDAF-NSSREGWGKTVILGVE 307 (390)
Q Consensus 281 ~g~~~~~~~~~-~~l~~~~G~~v~~g~~ 307 (390)
++.+. ++..+ ...+.. +.++.....
T Consensus 93 TdD~~-vN~~I~~~a~~~-~~lvn~vd~ 118 (223)
T PRK05562 93 TDDEK-LNNKIRKHCDRL-YKLYIDCSD 118 (223)
T ss_pred CCCHH-HHHHHHHHHHHc-CCeEEEcCC
Confidence 99888 65544 444455 666666533
No 387
>PRK12743 oxidoreductase; Provisional
Probab=95.06 E-value=0.13 Score=46.94 Aligned_cols=80 Identities=13% Similarity=0.041 Sum_probs=48.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHH----HHhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEI----GKKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~----~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+.++||+|+ |++|..+++.+...|+ +|+.+.+ +.++.+. ++..+.. +.+..+-.+..++.+.+.+... ++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568999998 9999999999999999 8877754 4444332 2334533 2222111011223233333222 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 388
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.04 E-value=0.12 Score=46.67 Aligned_cols=81 Identities=12% Similarity=0.134 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-ecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ |.+|...+..+...|+ +|+. ..++.++.+.+ +..+... .+..+-.+..++.+.+.+... +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999998 9999999999999999 7665 46666554332 2334332 222221112233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 389
>PRK08328 hypothetical protein; Provisional
Probab=94.99 E-value=0.14 Score=46.13 Aligned_cols=35 Identities=26% Similarity=0.341 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.+.+|+|+|+|++|..++..+...|..+++.++..
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999999999889888743
No 390
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.98 E-value=0.14 Score=49.66 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=31.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.+.+|+|+|+|++|..++..+...|..+++.++..
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999899999976
No 391
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.97 E-value=0.17 Score=52.01 Aligned_cols=76 Identities=13% Similarity=0.170 Sum_probs=59.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
++++|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+.... .-.+.+++..-+.+|.++-++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~-----~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNA-----ANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCC-----CCHHHHHhcCccccCEEEEEcCC
Confidence 689999999999999999999998 899999999999999988876555322 22344544433389988877776
Q ss_pred hH
Q 016363 284 TS 285 (390)
Q Consensus 284 ~~ 285 (390)
+.
T Consensus 492 ~~ 493 (558)
T PRK10669 492 GY 493 (558)
T ss_pred hH
Confidence 54
No 392
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.12 Score=47.46 Aligned_cols=78 Identities=19% Similarity=0.205 Sum_probs=49.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccE
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~ 276 (390)
+|||+|+ |++|...++.+...|+ +|+.++++.++.+.+ +..+.+. .+..+-.+..++.+.+..... +++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899998 9999999988888899 899999988775543 2233332 221111011222232322221 37999
Q ss_pred EEEcccC
Q 016363 277 CFECIGL 283 (390)
Q Consensus 277 vid~~g~ 283 (390)
+|.+.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999884
No 393
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.97 E-value=0.082 Score=48.68 Aligned_cols=80 Identities=20% Similarity=0.203 Sum_probs=52.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH----HHHHhcC-C-cEEEcCCCCCCcCHHHHHHhhcCC-
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF----EIGKKFG-I-TDFINPATCGDKTVSQVIKEMTDG- 272 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~----~~~~~~g-~-~~v~~~~~~~~~~~~~~i~~~~~~- 272 (390)
-+|+.|||+|+ +++|.+.++=...+|+ +++..+.+++.. +.+++.| + ....|-.+ .+++.+...+...+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhc
Confidence 36999999988 8999998877777888 888888776543 3444445 1 13344433 23343333333333
Q ss_pred -CccEEEEcccC
Q 016363 273 -GADYCFECIGL 283 (390)
Q Consensus 273 -g~D~vid~~g~ 283 (390)
.+|++++.+|-
T Consensus 113 G~V~ILVNNAGI 124 (300)
T KOG1201|consen 113 GDVDILVNNAGI 124 (300)
T ss_pred CCceEEEecccc
Confidence 79999999885
No 394
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.11 Score=48.80 Aligned_cols=35 Identities=14% Similarity=0.123 Sum_probs=31.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.+.++||+|+ +++|.++++.+...|+ +|+.++++.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~ 42 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRST 42 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeccc
Confidence 4789999998 8999999999999999 899998873
No 395
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=94.94 E-value=0.18 Score=47.06 Aligned_cols=134 Identities=21% Similarity=0.256 Sum_probs=70.2
Q ss_pred ccceeEEeeCCceEEcCCCCCcchhhccccchhhHHHHHHHHh-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEec
Q 016363 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234 (390)
Q Consensus 156 ~~a~~~~v~~~~v~~~p~~~~~~~aa~~~~~~~tA~~~l~~~~-~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~ 234 (390)
.|.+|-.-+.+.++.+.+++.|-.. ..-.|.+. +.... -.++|++||=+|+| .|.+++. |..+|+++|++++
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lc-l~~l~~~~~~g~~vLDvG~G-SGILaia-A~klGA~~v~a~D 191 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLC-LELLEKYVKPGKRVLDVGCG-SGILAIA-AAKLGAKKVVAID 191 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SS----HCHHHHHH-HHHHHHHSSTTSEEEEES-T-TSHHHHH-HHHTTBSEEEEEE
T ss_pred CCcccCCCCCcEEEEECCCCcccCC----CCHHHHHH-HHHHHHhccCCCEEEEeCCc-HHHHHHH-HHHcCCCeEEEec
Confidence 3555522244566777666544332 22333332 22222 26788999998873 1333332 2335888999999
Q ss_pred CChhhHHHHHh------cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccChHH---HHHHHHHhccCCceEEEEc
Q 016363 235 INPEKFEIGKK------FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV---MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 235 ~~~~~~~~~~~------~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g 305 (390)
..+.-.+.+++ +.....+.... +. ..++||+|+-..-.... ...+.+.++++ |.++..|
T Consensus 192 iDp~Av~~a~~N~~~N~~~~~~~v~~~~----~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSG 259 (295)
T PF06325_consen 192 IDPLAVEAARENAELNGVEDRIEVSLSE----DL-------VEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSG 259 (295)
T ss_dssp SSCHHHHHHHHHHHHTT-TTCEEESCTS----CT-------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeEEEEEec----cc-------ccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEcc
Confidence 99887666643 22222122111 11 12489999965554441 23455678888 9999888
Q ss_pred ccC
Q 016363 306 VEM 308 (390)
Q Consensus 306 ~~~ 308 (390)
...
T Consensus 260 Il~ 262 (295)
T PF06325_consen 260 ILE 262 (295)
T ss_dssp EEG
T ss_pred ccH
Confidence 653
No 396
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.94 E-value=0.13 Score=41.61 Aligned_cols=96 Identities=16% Similarity=0.272 Sum_probs=58.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEecCChh--h-HHHHHhcCCcEEEcCCCCCCcCHH----------------
Q 016363 206 VAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPE--K-FEIGKKFGITDFINPATCGDKTVS---------------- 263 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g--~~~Vi~~~~~~~--~-~~~~~~~g~~~v~~~~~~~~~~~~---------------- 263 (390)
|.|+|+ |.+|..++++.+... + +|++++-... + .+++++|.+..++-.++.....+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578899 999999999999886 6 7777774432 2 345567888877655430000111
Q ss_pred HHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 264 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 264 ~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+.++... .+|+|+.++-+-..+.-.+..++.+ +-+.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g--k~iaL 119 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG--KDIAL 119 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT--SEEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC--CeEEE
Confidence 112233333 7888888777777788888888754 44444
No 397
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.91 E-value=0.075 Score=49.12 Aligned_cols=80 Identities=20% Similarity=0.177 Sum_probs=53.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---E---EEcCCCCCCcCH---HHHH
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---D---FINPATCGDKTV---SQVI 266 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~---v~~~~~~~~~~~---~~~i 266 (390)
-.|.++||+|+ .++|.+.+..+...|+ +|+.+++++++.+.... .+.. . ..|... +.+. .+..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~ 82 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA 82 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence 46789999998 9999999999999999 99999999988655432 2221 1 112221 1222 2222
Q ss_pred HhhcCCCccEEEEcccC
Q 016363 267 KEMTDGGADYCFECIGL 283 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~ 283 (390)
.+...|+.|+.+++.|.
T Consensus 83 ~~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGA 99 (270)
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 22234589999998875
No 398
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.85 E-value=0.21 Score=48.17 Aligned_cols=60 Identities=27% Similarity=0.176 Sum_probs=44.5
Q ss_pred CcchhhccccchhhHHHHHHHHhCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 176 PLGIACLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 176 ~~~~aa~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
...+|....+.+.+- . +.+..+. -.|.+|.|.|-|.+|+.+++.+..+|+ +|++++.+..
T Consensus 181 ~r~~aTg~Gv~~~~~-~-a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 181 GRSEATGYGVFYAIR-E-ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCCcccceehHHHHH-H-HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 344555555433333 2 2344555 489999999999999999999999999 9999987776
No 399
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=94.84 E-value=0.18 Score=46.45 Aligned_cols=131 Identities=20% Similarity=0.161 Sum_probs=85.2
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC--------CcCHHHHHHhh
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG--------DKTVSQVIKEM 269 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~--------~~~~~~~i~~~ 269 (390)
++--++..+++.|+|..|+.++-.++..|+ -|...+-.+.+.+..+.+|+.-.-..++.. +.+|...-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 344577889999999999999999999999 899988888888888877764322111100 11232222222
Q ss_pred cCC---CccEEEEccc--ChH----HHHHHHHHhccCCceEEEEcccCCCC-CcccchHhhhc-ceeEEeee
Q 016363 270 TDG---GADYCFECIG--LTS----VMNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEILK-GRSVCGTY 330 (390)
Q Consensus 270 ~~~---g~D~vid~~g--~~~----~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~i~g~~ 330 (390)
..+ ++|+||-+.- +.. ....+...|+++ ..++++....+.. ..+.+-..... +++|.|..
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 222 8999997543 211 346788999998 9999998654432 22222222333 78888864
No 400
>PRK09135 pteridine reductase; Provisional
Probab=94.83 E-value=0.16 Score=45.71 Aligned_cols=79 Identities=9% Similarity=0.030 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHH----HhcCC-c-EEE--cCCCCCCcCHHHHHHhhc-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIG----KKFGI-T-DFI--NPATCGDKTVSQVIKEMT- 270 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~----~~~g~-~-~v~--~~~~~~~~~~~~~i~~~~- 270 (390)
.+.++||+|+ |.+|..+++.+...|+ +|++++++. ++.+.+ ..... . ..+ |-.+ ...+.+.+.+..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 81 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD--PDALPELVAACVA 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4578999998 9999999988888899 999999763 333322 22211 1 122 2222 122333333221
Q ss_pred -CCCccEEEEcccC
Q 016363 271 -DGGADYCFECIGL 283 (390)
Q Consensus 271 -~~g~D~vid~~g~ 283 (390)
-+++|+||.+.|.
T Consensus 82 ~~~~~d~vi~~ag~ 95 (249)
T PRK09135 82 AFGRLDALVNNASS 95 (249)
T ss_pred HcCCCCEEEECCCC
Confidence 1368999999883
No 401
>PLN02928 oxidoreductase family protein
Probab=94.81 E-value=0.19 Score=48.23 Aligned_cols=95 Identities=22% Similarity=0.329 Sum_probs=57.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC-----CcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.|.+|+|+|.|.+|..+++.++.+|+ +|++.+++..+... ..++ .....+... ...++.+.+. ..|+
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~L~ell~-----~aDi 229 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-cccCHHHHHh-----hCCE
Confidence 57899999999999999999999999 99999986432111 1110 000010000 0123443333 3678
Q ss_pred EEEcccChHH-----HHHHHHHhccCCceEEEEc
Q 016363 277 CFECIGLTSV-----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 277 vid~~g~~~~-----~~~~~~~l~~~~G~~v~~g 305 (390)
|+.+++.... -...+..|+++ ..+|.+|
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINva 262 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIA 262 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECC
Confidence 8777663321 13566777776 6777665
No 402
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.81 E-value=0.21 Score=44.35 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|...++.+...|..+++.++..
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999889998866
No 403
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.81 E-value=0.14 Score=41.35 Aligned_cols=86 Identities=20% Similarity=0.285 Sum_probs=53.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEec-CChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
-+|-|+|+|-+|......+...|. .|..+. +++++.+++.. ++...+.+..+ .. ..+|++|-++
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~-~~aDlv~iav 76 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL-RDADLVFIAV 76 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG-CC-SEEEE-S
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc-ccCCEEEEEe
Confidence 478999999999999999999998 787775 55556666654 34433333221 11 2689999999
Q ss_pred cChHHHHHHHHHhccC----CceEEEE
Q 016363 282 GLTSVMNDAFNSSREG----WGKTVIL 304 (390)
Q Consensus 282 g~~~~~~~~~~~l~~~----~G~~v~~ 304 (390)
.... +......|... .|+++..
T Consensus 77 pDda-I~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 77 PDDA-IAEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp -CCH-HHHHHHHHHCC--S-TT-EEEE
T ss_pred chHH-HHHHHHHHHHhccCCCCcEEEE
Confidence 9987 77777777653 2666544
No 404
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.80 E-value=0.14 Score=46.87 Aligned_cols=81 Identities=16% Similarity=0.293 Sum_probs=49.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCC---hhhHHHH-HhcCCcEEEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDIN---PEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~---~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
.+.++||+|+ +++|.+.++.+...|+ +|+.+.+. +++.+.+ ++++....+..+-.+..++.+.+.+... +
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4789999984 5899999998888999 88887543 3333333 3344322222111112334444444332 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++++.|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 79999998864
No 405
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.74 E-value=1.3 Score=42.01 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=34.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHH
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 243 (390)
.+|.|+|+|.+|...++.+...|. .|+..+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999999998888999 999999998765543
No 406
>PRK04457 spermidine synthase; Provisional
Probab=94.74 E-value=0.63 Score=42.79 Aligned_cols=94 Identities=16% Similarity=0.220 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CC----c--EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI----T--DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~----~--~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
.++.+||++|+|. |..+..+++.....+|++++.+++-.+.+++. +. + .++. .|..+.+.+. ++.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence 4567899999863 77777777776544999999999998888763 31 1 2222 2444445432 347
Q ss_pred ccEEE-EcccC---------hHHHHHHHHHhccCCceEEE
Q 016363 274 ADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVI 303 (390)
Q Consensus 274 ~D~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 303 (390)
+|+|+ |.... ...++.+.+.|+++ |.++.
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 99997 54322 23467888999998 99876
No 407
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.73 E-value=0.19 Score=47.48 Aligned_cols=39 Identities=13% Similarity=0.061 Sum_probs=33.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE 241 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~ 241 (390)
.|.+|||+|+ |.+|...+..+...|. +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4689999998 9999999998888899 8998888776543
No 408
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.72 E-value=0.092 Score=46.18 Aligned_cols=35 Identities=40% Similarity=0.459 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|...++.+...|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34679999999999999999999999889999877
No 409
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.71 E-value=0.18 Score=45.27 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HH----HHHhcCCcE-EE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE----IGKKFGITD-FI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~----~~~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
.+.++||+|+ |.+|...+..+...|+ +|+++.+++.+ .+ .++..+... .+ |-.+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4568999998 9999999999998999 78777766543 22 122223322 22 2222 1223333333322
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|.+|.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 268999998874
No 410
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.70 E-value=0.16 Score=45.61 Aligned_cols=80 Identities=23% Similarity=0.336 Sum_probs=49.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEe-cCChhhHHHHHh----cCCcE-EEcCCCCCCcCHHHHHHhhcC--CC
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGKK----FGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~~----~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g 273 (390)
+.++||+|+ |.+|...+..+...|+ +|+.+ ++++++.+.+.. .+... ++..+-.+..++.+.+.+... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999998 9999999988888899 88888 888776544322 22222 221111011223232322222 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 411
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.70 E-value=0.35 Score=46.63 Aligned_cols=98 Identities=20% Similarity=0.286 Sum_probs=63.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEec--CChhhH-HHHHhcCCcEEEcCCCCCCcCH--------------H
Q 016363 204 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVD--INPEKF-EIGKKFGITDFINPATCGDKTV--------------S 263 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~--g~~~Vi~~~--~~~~~~-~~~~~~g~~~v~~~~~~~~~~~--------------~ 263 (390)
.+|.|+|+ |++|..++++.+.. .+ +|++++ ++.++. ++++++++..++-.++.....+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 47899997 99999999988755 46 777775 444443 4556788887665443000011 1
Q ss_pred HHHHhhcCC-CccEEEEcccChHHHHHHHHHhccCCceEEEE
Q 016363 264 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 264 ~~i~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+.++... .+|+|+.++++...+...+..++.+ +-+.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG--K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG--KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC--CcEEE
Confidence 122233333 6999999998876688888888764 44444
No 412
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.67 E-value=0.2 Score=49.14 Aligned_cols=76 Identities=20% Similarity=0.281 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCc-EEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
.+++++|+|+ |++|.+.++.+...|+ +|+++++++++.+... ..+.. ..+..+- .+ .+.+.+.. +++|++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv---sd-~~~v~~~l-~~IDiLI 250 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV---GQ-EAALAELL-EKVDILI 250 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC---CC-HHHHHHHh-CCCCEEE
Confidence 4789999998 9999999998888999 9999998876654322 11111 1222111 11 22333332 3799999
Q ss_pred EcccC
Q 016363 279 ECIGL 283 (390)
Q Consensus 279 d~~g~ 283 (390)
.+.|.
T Consensus 251 nnAGi 255 (406)
T PRK07424 251 INHGI 255 (406)
T ss_pred ECCCc
Confidence 88774
No 413
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.66 E-value=0.4 Score=43.22 Aligned_cols=106 Identities=17% Similarity=0.338 Sum_probs=72.4
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhhcC
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
...+.++|++||=+++| +|-.+..+++..|-.+|+++|.|++-++.+++ .+... +.+-. .+. +.+ -+.+
T Consensus 45 ~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~dA-e~L-Pf~D 117 (238)
T COG2226 45 SLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GDA-ENL-PFPD 117 (238)
T ss_pred HhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---ech-hhC-CCCC
Confidence 45566789999988664 68889999998886699999999998877754 23221 11111 111 111 1223
Q ss_pred CCccEEEEcccC------hHHHHHHHHHhccCCceEEEEcccCC
Q 016363 272 GGADYCFECIGL------TSVMNDAFNSSREGWGKTVILGVEMH 309 (390)
Q Consensus 272 ~g~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 309 (390)
..+|+|.-+.|- +.++..+.+.|+|+ |+++.+....+
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 389999776664 33688999999999 99988876554
No 414
>PLN00016 RNA-binding protein; Provisional
Probab=94.64 E-value=0.3 Score=47.44 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=61.0
Q ss_pred CCEEEEE----cC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH-----------HhcCCcEEEcCCCCCCcCHHHHH
Q 016363 203 GSTVAIF----GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-----------KKFGITDFINPATCGDKTVSQVI 266 (390)
Q Consensus 203 g~~VlI~----Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~-----------~~~g~~~v~~~~~~~~~~~~~~i 266 (390)
..+|||+ |+ |.+|...+..+...|. +|+++++++.+...+ ...+...+.. |+.+ +
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~-------D~~d-~ 122 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWG-------DPAD-V 122 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEEe-------cHHH-H
Confidence 3679999 98 9999999998888898 999999887643221 2223333321 2322 3
Q ss_pred HhhcCC-CccEEEEcccChH-HHHHHHHHhccCC-ceEEEEcc
Q 016363 267 KEMTDG-GADYCFECIGLTS-VMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 267 ~~~~~~-g~D~vid~~g~~~-~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
.+.... ++|+||++.+... ....+++.++..+ .++|.++.
T Consensus 123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 333333 8999999987543 2345566665441 36777664
No 415
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.64 E-value=0.3 Score=45.39 Aligned_cols=81 Identities=16% Similarity=0.194 Sum_probs=58.0
Q ss_pred HHhC-CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 196 KVAG-VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 196 ~~~~-~~~g~~VlI~Gag~-vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
+..+ --.|.+|+|+|.|. +|...+.++...|+ +|++..+.. .++.+.+ ..
T Consensus 151 ~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~~ 202 (283)
T PRK14192 151 KAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----KQ 202 (283)
T ss_pred HHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----cc
Confidence 3334 35789999999976 99999999999999 888776421 1222222 26
Q ss_pred ccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 274 ~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+|+|+.++|.+..+ -.+.++++ ..++.+|..
T Consensus 203 aDIvI~AtG~~~~v--~~~~lk~g-avViDvg~n 233 (283)
T PRK14192 203 ADIIVGAVGKPELI--KKDWIKQG-AVVVDAGFH 233 (283)
T ss_pred CCEEEEccCCCCcC--CHHHcCCC-CEEEEEEEe
Confidence 89999999866622 23568887 888888854
No 416
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.61 E-value=0.096 Score=47.95 Aligned_cols=76 Identities=18% Similarity=0.264 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. ..... ..|..+ ..++.+.+.+... +++|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 9999999999999999 99999887655321 11111 122222 2233333333322 379999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 998873
No 417
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.60 E-value=0.21 Score=45.60 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH-Hh----cCCc-EEEcCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KK----FGIT-DFINPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~-~~----~g~~-~v~~~~~~~~~~~~~~i~~~~~-- 271 (390)
+++++||+|+ +++|.+.+..+...|+ +|+.+.+ ++++.+.+ ++ .+.. ..+..+-.+..++.+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 5789999998 9999999999889999 8887754 44444322 11 2322 2222111112233333333322
Q ss_pred CCccEEEEccc
Q 016363 272 GGADYCFECIG 282 (390)
Q Consensus 272 ~g~D~vid~~g 282 (390)
+++|+++.+.|
T Consensus 86 g~id~lv~nAg 96 (260)
T PRK08416 86 DRVDFFISNAI 96 (260)
T ss_pred CCccEEEECcc
Confidence 37999999875
No 418
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.58 E-value=0.082 Score=43.99 Aligned_cols=86 Identities=20% Similarity=0.208 Sum_probs=51.5
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCC--CC-CcCHHHHHHhhcCCCccEEEEccc
Q 016363 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT--CG-DKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 206 VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~--~~-~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
|+|+|+|++|...+..++..|. +|..+++++ +.+.+++.|........+ .. ....... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888888999 999999888 777776644321111100 00 0000000 111238999999987
Q ss_pred ChHHHHHHHHHhcc
Q 016363 283 LTSVMNDAFNSSRE 296 (390)
Q Consensus 283 ~~~~~~~~~~~l~~ 296 (390)
... ...+++.+++
T Consensus 77 a~~-~~~~l~~l~~ 89 (151)
T PF02558_consen 77 AYQ-LEQALQSLKP 89 (151)
T ss_dssp GGG-HHHHHHHHCT
T ss_pred ccc-hHHHHHHHhh
Confidence 655 4444444443
No 419
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.57 E-value=0.33 Score=45.33 Aligned_cols=70 Identities=21% Similarity=0.226 Sum_probs=50.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|+...
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 37889999999988888888898 99999999999888877665321 12222222 478888888765
Q ss_pred HHHH
Q 016363 285 SVMN 288 (390)
Q Consensus 285 ~~~~ 288 (390)
....
T Consensus 67 ~~~~ 70 (291)
T TIGR01505 67 PQVE 70 (291)
T ss_pred HHHH
Confidence 4343
No 420
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.56 E-value=0.16 Score=45.77 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhh-HHHH---HhcCCcEEE---cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEK-FEIG---KKFGITDFI---NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~-~~~~---~~~g~~~v~---~~~~~~~~~~~~~i~~~~~- 271 (390)
++.++||+|+ |++|...++.+...|+ +|++.. +++.+ .+.+ +..+..... |..+ ..++.+.+.+...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAE 78 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3678999998 9999999999999999 777754 33332 2222 334443322 2222 1223333333221
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++++.|.
T Consensus 79 ~~~id~li~~ag~ 91 (246)
T PRK12938 79 VGEIDVLVNNAGI 91 (246)
T ss_pred hCCCCEEEECCCC
Confidence 379999999885
No 421
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.51 E-value=0.39 Score=45.67 Aligned_cols=94 Identities=17% Similarity=0.082 Sum_probs=63.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-cC----C-CCCCcCHHHHHHhhcCCCccEE
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NP----A-TCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~-~~----~-~~~~~~~~~~i~~~~~~g~D~v 277 (390)
-+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+...+.+... .. . -....+..+.+ +.+|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 479999999999999998888898 899999998887777654211000 00 0 00001232222 268999
Q ss_pred EEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 278 FECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
|-++.... +...++.++++ -.++.+.
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~ 104 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCA 104 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEe
Confidence 99999887 77888888876 5565554
No 422
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.51 E-value=0.28 Score=42.98 Aligned_cols=92 Identities=13% Similarity=0.094 Sum_probs=56.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-------------------h----HHHHHhcCCcEEEcCCCCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------K----FEIGKKFGITDFINPATCG 258 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-------------------~----~~~~~~~g~~~v~~~~~~~ 258 (390)
...+|+|+|+|++|...+..+...|..++..++...- | .+.++++.++..+....
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 4578999999999999999999999988888874421 1 12234555554333222
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccC
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREG 297 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~ 297 (390)
..+.+...++. .++|+|++|..........-+..+..
T Consensus 98 -~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~ 134 (197)
T cd01492 98 -DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL 134 (197)
T ss_pred -cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc
Confidence 11111111111 26999999988766444444444444
No 423
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.51 E-value=0.48 Score=43.27 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=64.9
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcCC-C
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDG-G 273 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~~-g 273 (390)
....++++++||=+|+| .|..+..+++.....+|++++.++.-.+.+++.... .++.. ++. .+... .
T Consensus 25 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~~~ 93 (258)
T PRK01683 25 ARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPPQA 93 (258)
T ss_pred hhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCCCC
Confidence 45567889999999885 355567777766434999999999988887664322 22221 221 12223 8
Q ss_pred ccEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 274 ADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 274 ~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+|+|+....- ...+..+.+.|+++ |.++...
T Consensus 94 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 94 LDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred ccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 9999854432 23477888999999 9987753
No 424
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.49 E-value=1.3 Score=40.21 Aligned_cols=98 Identities=10% Similarity=0.235 Sum_probs=62.2
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC-cEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
+.....++.+||-+|+|. |..+..+++ .|. +|++++.+++.++.+++... ..++.. ++.+ + .+.++.+
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~------d~~~-~-~~~~~~f 104 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAG------DIES-L-PLATATF 104 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEc------Cccc-C-cCCCCcE
Confidence 334445678899999865 655555554 576 99999999998888876432 222211 1111 0 1122379
Q ss_pred cEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 275 DYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 275 D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
|+|+....- ...+..+.+.|+++ |.++...
T Consensus 105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~ 140 (251)
T PRK10258 105 DLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTT 140 (251)
T ss_pred EEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence 999865431 22467788999998 9988654
No 425
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.48 E-value=0.2 Score=45.28 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=49.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCcE-EE--cCCCCCCcCHHHHHHhhcC--CC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FI--NPATCGDKTVSQVIKEMTD--GG 273 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~g 273 (390)
.+++|+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ +..+... .+ |-.+ ...+.+.+.+... ++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence 36899998 9999999998889999 899999887654333 2334322 22 2222 1223333333322 26
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|.+.|.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 426
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.47 E-value=0.17 Score=46.23 Aligned_cols=104 Identities=15% Similarity=0.194 Sum_probs=61.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCCh------hhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcC
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP------EKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD 271 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~------~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~ 271 (390)
.|.+++|+|+ +++|.+.++.+...|+ +|+.+.++. +..+.+.+.+.. ..+..+-.+..++.+.+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4789999996 4899999998888999 888775432 223333322211 2221111112233333333322
Q ss_pred --CCccEEEEcccCh-------H----------------------HHHHHHHHhccCCceEEEEccc
Q 016363 272 --GGADYCFECIGLT-------S----------------------VMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 272 --~g~D~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+++|+++++.|.. . ..+.++..|++. |+|+.++..
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 3799999998732 1 124456677777 899888753
No 427
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.47 E-value=0.24 Score=46.56 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHH----HHHhcCCcEEEcCCCCCCc-CHHHHHHhhc-CCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE----IGKKFGITDFINPATCGDK-TVSQVIKEMT-DGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~----~~~~~g~~~v~~~~~~~~~-~~~~~i~~~~-~~g 273 (390)
.+.++||+|+ +++|...++.+...|+ +|+.++++. ++.+ .++..|.......-+..+. .+.+.+.+.. -++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999998888899 888887643 2322 2233343322222111111 1222222111 247
Q ss_pred ccEEEEcccC
Q 016363 274 ADYCFECIGL 283 (390)
Q Consensus 274 ~D~vid~~g~ 283 (390)
+|++|++.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 428
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.44 E-value=0.23 Score=41.81 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=56.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC------cEEEcCCCCCCcCHHHHHHhhcCCCccEEE
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI------TDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~i~~~~~~g~D~vi 278 (390)
+|.|+|+|..|.+++.++...|. +|....++++..+.+++-+. +..+...-.-..++.+.++ +.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence 58899999999999999999998 99999999988877764221 1111000000124555542 689999
Q ss_pred EcccChHHHHHHHHHhcc
Q 016363 279 ECIGLTSVMNDAFNSSRE 296 (390)
Q Consensus 279 d~~g~~~~~~~~~~~l~~ 296 (390)
-+++... +...++.+++
T Consensus 75 iavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp E-S-GGG-HHHHHHHHTT
T ss_pred ecccHHH-HHHHHHHHhh
Confidence 9999876 6767766666
No 429
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.42 E-value=0.22 Score=47.08 Aligned_cols=78 Identities=19% Similarity=0.164 Sum_probs=50.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEecCChhhHHHH-HhcC---Cc-EEE--cCCCCCCcCHHHHHHhhc--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG-KKFG---IT-DFI--NPATCGDKTVSQVIKEMT--D 271 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~-~~~g---~~-~v~--~~~~~~~~~~~~~i~~~~--~ 271 (390)
+.++||+|+ +++|.+.++.+...| + +|+.+++++++.+.+ +++. .. .++ |-.+ ..++.+.+.++. .
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 568999998 999999988888889 7 999999988776544 2332 11 122 2222 122333333332 2
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++|.+.|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 379999998874
No 430
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.40 E-value=0.48 Score=41.93 Aligned_cols=95 Identities=16% Similarity=0.059 Sum_probs=62.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh-hhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.|..|||+|+|.+|.-=+.+....|+ +|+++..+. .++..+.+-+.-..+. . .+.... + .++++||-+
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~-----~~~~~~--~--~~~~lviaA 79 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-R-----EFDAED--L--DDAFLVIAA 79 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-c-----ccChhh--h--cCceEEEEe
Confidence 56799999999999999999999999 888888766 3333332222211111 1 111111 1 158999999
Q ss_pred ccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 281 IGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
++++..-+...+..++. +..+.+....
T Consensus 80 t~d~~ln~~i~~~a~~~-~i~vNv~D~p 106 (210)
T COG1648 80 TDDEELNERIAKAARER-RILVNVVDDP 106 (210)
T ss_pred CCCHHHHHHHHHHHHHh-CCceeccCCc
Confidence 99988344566666666 7888776443
No 431
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.40 E-value=0.29 Score=50.86 Aligned_cols=77 Identities=22% Similarity=0.302 Sum_probs=60.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 203 g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+.. + .+-.+.+++..-+.+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-D----at~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-D----ATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-e----CCCHHHHHhcCCCcCCEEEEEeC
Confidence 3689999999999999999999999 8999999999999999888654442 2 22233444433338999999998
Q ss_pred ChH
Q 016363 283 LTS 285 (390)
Q Consensus 283 ~~~ 285 (390)
++.
T Consensus 474 d~~ 476 (621)
T PRK03562 474 DPQ 476 (621)
T ss_pred CHH
Confidence 866
No 432
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.36 E-value=0.23 Score=44.45 Aligned_cols=79 Identities=14% Similarity=0.207 Sum_probs=47.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH-Hh---cCCc-EEEcCCCCCCcCHHHHHHhhc--CCCc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KK---FGIT-DFINPATCGDKTVSQVIKEMT--DGGA 274 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~-~~---~g~~-~v~~~~~~~~~~~~~~i~~~~--~~g~ 274 (390)
.++||+|+ |++|...++.+...|+ +|+++.+ ++++.+.. .+ .+.. .++..+-.+...+.+.+.++. .+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46899998 9999999999989999 8888887 44443322 22 2222 122111101122333333332 1369
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|+||.+.|.
T Consensus 80 d~vi~~ag~ 88 (242)
T TIGR01829 80 DVLVNNAGI 88 (242)
T ss_pred cEEEECCCC
Confidence 999999874
No 433
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.35 E-value=0.17 Score=45.73 Aligned_cols=76 Identities=25% Similarity=0.240 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCccEE
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC 277 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~D~v 277 (390)
++.++||+|+ |.+|...++.+...|+ +|++++++. ....+.. ..+..+-.+...+.+.+.+... +++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4688999998 9999999998888999 999999876 2222221 1221111011233333333222 369999
Q ss_pred EEcccC
Q 016363 278 FECIGL 283 (390)
Q Consensus 278 id~~g~ 283 (390)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998875
No 434
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.34 E-value=0.22 Score=45.17 Aligned_cols=79 Identities=13% Similarity=0.179 Sum_probs=47.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh-hHH----HHHhcCCc-EEEcCCCCCCcCHHHHHHhhcC--CCc
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~~g~~-~v~~~~~~~~~~~~~~i~~~~~--~g~ 274 (390)
.++||+|+ |.+|...+..+...|+ +|++++++.. +.+ .++..+.. .++..+-.+..++.+.+.+... +++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57999998 9999999999888999 8999887643 222 22223322 2222111112233333333322 379
Q ss_pred cEEEEcccC
Q 016363 275 DYCFECIGL 283 (390)
Q Consensus 275 D~vid~~g~ 283 (390)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (256)
T PRK12745 82 DCLVNNAGV 90 (256)
T ss_pred CEEEECCcc
Confidence 999998874
No 435
>PRK05855 short chain dehydrogenase; Validated
Probab=94.34 E-value=0.17 Score=51.89 Aligned_cols=79 Identities=16% Similarity=0.215 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhcC--
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMTD-- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~~-- 271 (390)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. ..|... ++ |-.+ ...+.+.+.+...
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4678999998 9999999998888999 8999999987765442 234322 22 2222 1223333333322
Q ss_pred CCccEEEEcccC
Q 016363 272 GGADYCFECIGL 283 (390)
Q Consensus 272 ~g~D~vid~~g~ 283 (390)
+++|++++++|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 379999999885
No 436
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=94.34 E-value=0.22 Score=47.77 Aligned_cols=77 Identities=16% Similarity=0.129 Sum_probs=49.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hc--CCc-EEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF--GIT-DFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~--g~~-~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
..+.+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. .+ +.. .++..+- .+ .+.+.++.. ++|
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~-~~d 81 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLHLLSKWKEGDRLRLFRADL---QE-EGSFDEAVK-GCD 81 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhhccCCeEEEEECCC---CC-HHHHHHHHc-CCC
Confidence 46779999998 9999999999988999 8999988876654332 22 111 2222111 11 122333322 589
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+||.+.+.
T Consensus 82 ~Vih~A~~ 89 (353)
T PLN02896 82 GVFHVAAS 89 (353)
T ss_pred EEEECCcc
Confidence 99988763
No 437
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.33 E-value=0.46 Score=44.43 Aligned_cols=70 Identities=19% Similarity=0.212 Sum_probs=50.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .++.+.+. ..|+||.|+...
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~~d~vi~~vp~~ 69 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVAE-----QCDVIITMLPNS 69 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEeCCCH
Confidence 68999999999988887778888 89999999998887777664211 12322221 478888888765
Q ss_pred HHHH
Q 016363 285 SVMN 288 (390)
Q Consensus 285 ~~~~ 288 (390)
....
T Consensus 70 ~~~~ 73 (296)
T PRK11559 70 PHVK 73 (296)
T ss_pred HHHH
Confidence 5344
No 438
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.32 E-value=0.16 Score=48.55 Aligned_cols=34 Identities=21% Similarity=0.145 Sum_probs=30.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
++|||+|+ |.+|...++.+...|. +|++++++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCc
Confidence 47999998 9999999999999999 9999988754
No 439
>PLN03075 nicotianamine synthase; Provisional
Probab=94.31 E-value=0.36 Score=44.97 Aligned_cols=97 Identities=18% Similarity=0.193 Sum_probs=63.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHhcC-----CcEEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
+.++|+-+|+|+.++.++.++..+.. .+++.++.+++..+.+++.- ...-+.... .+..+... ..+++|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~--~l~~FD 197 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTE--SLKEYD 197 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhccc--ccCCcC
Confidence 78999999999999998888875532 28999999999888886632 111111111 22222110 123899
Q ss_pred EEEEcc-------cChHHHHHHHHHhccCCceEEEE
Q 016363 276 YCFECI-------GLTSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 276 ~vid~~-------g~~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+||-.+ .-...+..+.+.|+++ |.++.=
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 998654 1122467888999998 877643
No 440
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.31 E-value=0.25 Score=46.51 Aligned_cols=104 Identities=11% Similarity=-0.008 Sum_probs=69.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHH-hcCCc--EEEcCCCCCCcCHHHHHHhhcCCCcc
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGAD 275 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~~g~~--~v~~~~~~~~~~~~~~i~~~~~~g~D 275 (390)
-....+++|+|+|..|.+.+..+. ..+.++|.+..+++++.+.+. ++... .+. . .++.+.+. ++|
T Consensus 122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aD 190 (304)
T PRK07340 122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVD 190 (304)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCC
Confidence 345678999999999999888876 467778999999998866553 34211 111 1 23444442 699
Q ss_pred EEEEcccChHHHHHHHHHhccCCceEEEEcccCCCCCcccchH
Q 016363 276 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318 (390)
Q Consensus 276 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 318 (390)
+|+.|++....+-.. .++++ -.+..+|...+ ....+++.
T Consensus 191 iVitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p-~~~El~~~ 229 (304)
T PRK07340 191 LVVTATTSRTPVYPE--AARAG-RLVVAVGAFTP-DMAELAPR 229 (304)
T ss_pred EEEEccCCCCceeCc--cCCCC-CEEEecCCCCC-CcccCCHH
Confidence 999998876644333 36776 78888885543 23344444
No 441
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.27 E-value=0.52 Score=44.36 Aligned_cols=37 Identities=22% Similarity=0.233 Sum_probs=30.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga---g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
.|.++||+|+ .++|.++++.+...|+ +|+. .++..++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchh
Confidence 5889999998 7899999999999999 8887 4454443
No 442
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.26 E-value=1.1 Score=42.45 Aligned_cols=96 Identities=14% Similarity=0.091 Sum_probs=61.6
Q ss_pred hCCCCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHHh-c---CCcEEEcCCCCCCcCHHHHHHhhcCC
Q 016363 198 AGVEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKTVSQVIKEMTDG 272 (390)
Q Consensus 198 ~~~~~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~-~---g~~~v~~~~~~~~~~~~~~i~~~~~~ 272 (390)
..-+...+|+|+|+|..|...+..+. ..+..+|++..+++++.+.+.+ + |..... . .+..+.++
T Consensus 120 La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~-----~~~~~av~----- 188 (314)
T PRK06141 120 LARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V-----TDLEAAVR----- 188 (314)
T ss_pred hCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e-----CCHHHHHh-----
Confidence 33456789999999999999886444 4676699999999988665533 3 322111 1 13333432
Q ss_pred CccEEEEcccChHHHHHHHHHhccCCceEEEEcc
Q 016363 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 273 g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 306 (390)
++|+|+.+++....+ .-.+.++++ -.+..+|.
T Consensus 189 ~aDIVi~aT~s~~pv-l~~~~l~~g-~~i~~ig~ 220 (314)
T PRK06141 189 QADIISCATLSTEPL-VRGEWLKPG-THLDLVGN 220 (314)
T ss_pred cCCEEEEeeCCCCCE-ecHHHcCCC-CEEEeeCC
Confidence 699999888865421 122567776 55556663
No 443
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.26 E-value=0.24 Score=44.48 Aligned_cols=77 Identities=12% Similarity=0.044 Sum_probs=48.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-ecCChhhHHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhc--CC
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.++||+|+ |.+|...++.+...|+ +|++ ..+++++.+.+ +..+.. .++ |..+ ...+.+.+.+.. .+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD--ENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC--HHHHHHHHHHHHHhCC
Confidence 47899998 9999999998888999 7766 45666554332 223332 222 2222 223344444432 23
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (247)
T PRK09730 79 PLAALVNNAGI 89 (247)
T ss_pred CCCEEEECCCC
Confidence 79999999885
No 444
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=94.25 E-value=0.14 Score=45.57 Aligned_cols=71 Identities=11% Similarity=0.149 Sum_probs=48.8
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhc-CCcEE-EcCCCCCCcCHHHHHHhhcCC-CccEEEEcc
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDF-INPATCGDKTVSQVIKEMTDG-GADYCFECI 281 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~-g~~~v-~~~~~~~~~~~~~~i~~~~~~-g~D~vid~~ 281 (390)
|||+|+ |.+|...+..+...|. .|+++.+++......... ....+ .|..+ .+.+.++..+ .+|.||.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~------~~~~~~~~~~~~~d~vi~~a 73 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLTD------KEQLEKLLEKANIDVVIHLA 73 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETTS------HHHHHHHHHHHTESEEEEEB
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeeccc------cccccccccccCceEEEEee
Confidence 799998 9999999999999999 888888887766554432 22211 12222 2233333333 789999998
Q ss_pred cC
Q 016363 282 GL 283 (390)
Q Consensus 282 g~ 283 (390)
+.
T Consensus 74 ~~ 75 (236)
T PF01370_consen 74 AF 75 (236)
T ss_dssp SS
T ss_pred cc
Confidence 86
No 445
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.24 E-value=0.27 Score=45.52 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=56.0
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEecCChhhHHHHH-----hcCCc---EEEcCCCCCCcC-HHHHHHhh
Q 016363 201 EVGSTVAIFGL-GAVGLA-VAEGARLNRASKIIGVDINPEKFEIGK-----KFGIT---DFINPATCGDKT-VSQVIKEM 269 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~-ai~la~~~g~~~Vi~~~~~~~~~~~~~-----~~g~~---~v~~~~~~~~~~-~~~~i~~~ 269 (390)
+-|++.+|+|+ .++|.+ |-+||+ .|. +|+.+.|+++|++.++ ..++. .++|+.. .+ .-+.+++.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHH
Confidence 35789999999 899977 556666 999 8999999999987663 24432 3456555 33 24445555
Q ss_pred cCC-CccEEEEcccCh
Q 016363 270 TDG-GADYCFECIGLT 284 (390)
Q Consensus 270 ~~~-g~D~vid~~g~~ 284 (390)
..+ .+-+.++++|..
T Consensus 122 l~~~~VgILVNNvG~~ 137 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGMS 137 (312)
T ss_pred hcCCceEEEEeccccc
Confidence 555 788888999853
No 446
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=94.23 E-value=0.2 Score=47.27 Aligned_cols=38 Identities=13% Similarity=0.106 Sum_probs=32.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
.+.+|||+|+ |.+|...+..+...|. +|++++++.++.
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-~V~~~~r~~~~~ 41 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY-TVKATVRDPNDP 41 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC-EEEEEEcCCCch
Confidence 3578999998 9999999999999999 899988876543
No 447
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.20 E-value=0.26 Score=49.51 Aligned_cols=70 Identities=26% Similarity=0.291 Sum_probs=50.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChh-----hHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccE
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-----KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~-----~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~ 276 (390)
.+.+|+|+|+|.+|+.++.+++..|+ +|++++.++. ..+.+++.|.....+... . ...++|+
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~----~--------~~~~~D~ 81 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP----T--------LPEDTDL 81 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc----c--------ccCCCCE
Confidence 56799999999999999999999999 8999886542 224456667655443322 1 0126888
Q ss_pred EEEcccCh
Q 016363 277 CFECIGLT 284 (390)
Q Consensus 277 vid~~g~~ 284 (390)
|+-+.|-+
T Consensus 82 Vv~s~Gi~ 89 (480)
T PRK01438 82 VVTSPGWR 89 (480)
T ss_pred EEECCCcC
Confidence 88887753
No 448
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.19 E-value=0.32 Score=50.40 Aligned_cols=93 Identities=12% Similarity=0.129 Sum_probs=67.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 204 ~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+... .+-.+.+++..-+.+|.++-++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GD-----at~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGD-----ATQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEee-----CCCHHHHHhcCCccCCEEEEEeCC
Confidence 689999999999999999999999 89999999999999999886554421 233344544433389999999998
Q ss_pred hHHHHHH---HHHhccCCceEEE
Q 016363 284 TSVMNDA---FNSSREGWGKTVI 303 (390)
Q Consensus 284 ~~~~~~~---~~~l~~~~G~~v~ 303 (390)
+..-... .+...+. .+++.
T Consensus 475 ~~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 475 PEDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHHCCC-CeEEE
Confidence 7633233 3344444 45553
No 449
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.18 E-value=0.75 Score=41.97 Aligned_cols=97 Identities=18% Similarity=0.145 Sum_probs=66.4
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcC-
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~- 271 (390)
+.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+. .+.. ++..
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~~----~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDVR----DWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cChh----hCCCC
Confidence 33556678889999999854 56667777765 55 899999999988888775543222 1221 2222
Q ss_pred CCccEEEEccc-----C-hHHHHHHHHHhccCCceEEEE
Q 016363 272 GGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 272 ~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 304 (390)
+.+|+|+.... . ...+..+.+.|+++ |+++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 38999986443 2 23467788999999 998765
No 450
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.18 E-value=0.29 Score=43.84 Aligned_cols=78 Identities=15% Similarity=0.193 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh-HHHH----HhcCCc-EEE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~-~~~~----~~~g~~-~v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
+..+|||+|+ |.+|...++.+...|+ +|+++.++..+ .+.+ ...+.. +++ |..+ ..++.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 81 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD--KAALEAAVAAAVER 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC--HHHHHHHHHHHHHH
Confidence 3468999998 9999999999999999 77776655443 2222 223322 222 2222 1223333333221
Q ss_pred -CCccEEEEccc
Q 016363 272 -GGADYCFECIG 282 (390)
Q Consensus 272 -~g~D~vid~~g 282 (390)
+++|.||.+.|
T Consensus 82 ~~~id~vi~~ag 93 (249)
T PRK12825 82 FGRIDILVNNAG 93 (249)
T ss_pred cCCCCEEEECCc
Confidence 37999999887
No 451
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.14 E-value=0.5 Score=44.99 Aligned_cols=85 Identities=26% Similarity=0.171 Sum_probs=56.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 281 (390)
.|.+|.|+|.|.+|...++.++..|. +|++.+++++...... ... .++.+.+. ..|+|+-++
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~~--------~~~----~~l~ell~-----~aDiVil~l 206 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDFL--------TYK----DSVKEAIK-----DADIISLHV 206 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhhh--------hcc----CCHHHHHh-----cCCEEEEeC
Confidence 57789999999999999999999999 9999998875432110 011 12333332 478888777
Q ss_pred cChHH-----HHHHHHHhccCCceEEEEc
Q 016363 282 GLTSV-----MNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 282 g~~~~-----~~~~~~~l~~~~G~~v~~g 305 (390)
+.... ....+..|+++ ..+|.++
T Consensus 207 P~t~~t~~li~~~~l~~mk~g-avlIN~a 234 (330)
T PRK12480 207 PANKESYHLFDKAMFDHVKKG-AILVNAA 234 (330)
T ss_pred CCcHHHHHHHhHHHHhcCCCC-cEEEEcC
Confidence 75431 12455667766 6666665
No 452
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.14 E-value=0.31 Score=46.91 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
...+|||+|+|++|..+++.+...|..+++.++...
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 447899999999999999999999998999888553
No 453
>PRK05599 hypothetical protein; Provisional
Probab=94.12 E-value=0.25 Score=44.71 Aligned_cols=77 Identities=14% Similarity=0.189 Sum_probs=48.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHH----HhcCCc--EEEcCCCCCCcCHHHHHHhhcC--CCcc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT--DFINPATCGDKTVSQVIKEMTD--GGAD 275 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~~g~~--~v~~~~~~~~~~~~~~i~~~~~--~g~D 275 (390)
++||+|+ +++|.+.++.+. .|. +|+.+++++++.+.+ ++.+.+ ..+..+-.+...+.+.+.+... +++|
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 6899998 999999887665 488 999999998877644 233432 2222211112233333333322 3799
Q ss_pred EEEEcccC
Q 016363 276 YCFECIGL 283 (390)
Q Consensus 276 ~vid~~g~ 283 (390)
+++.+.|.
T Consensus 80 ~lv~nag~ 87 (246)
T PRK05599 80 LAVVAFGI 87 (246)
T ss_pred EEEEecCc
Confidence 99988874
No 454
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.12 E-value=1.1 Score=41.97 Aligned_cols=57 Identities=23% Similarity=0.155 Sum_probs=47.3
Q ss_pred HHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC---hhhHHHHHhcCCcEEEc
Q 016363 196 KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN---PEKFEIGKKFGITDFIN 253 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~---~~~~~~~~~~g~~~v~~ 253 (390)
....+.||.++||-.. |.+|...+-++...|+ ++|++... .+|+..++.+|++.+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 3456899999999986 9999999999999999 88888754 47788889999876653
No 455
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.10 E-value=0.26 Score=46.57 Aligned_cols=38 Identities=16% Similarity=0.146 Sum_probs=32.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhH
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 240 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~ 240 (390)
.+.+|||+|+ |.+|...+..+...|+ +|+++++++++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence 4689999998 9999999999988999 898888776543
No 456
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.10 E-value=0.78 Score=43.63 Aligned_cols=95 Identities=19% Similarity=0.152 Sum_probs=63.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHH-hc----CCcEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KF----GITDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~~----g~~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
.+...+++|+|+|..+.+.+..+. ..+.++|.+..++++|.+.+. .+ |.+ +... .++.+.+. .
T Consensus 126 ~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av~-----~ 194 (326)
T TIGR02992 126 REDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAMS-----G 194 (326)
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHhc-----c
Confidence 345578999999999988877665 578779999999998876553 23 432 2211 23444442 6
Q ss_pred ccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 274 ~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+|+|+.|++....+ .....++++ -.+..+|..
T Consensus 195 aDiVvtaT~s~~p~-i~~~~l~~g-~~i~~vg~~ 226 (326)
T TIGR02992 195 ADIIVTTTPSETPI-LHAEWLEPG-QHVTAMGSD 226 (326)
T ss_pred CCEEEEecCCCCcE-ecHHHcCCC-cEEEeeCCC
Confidence 99999998875421 223457776 667777754
No 457
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.10 E-value=0.35 Score=41.46 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=29.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
+|+|+|+|++|...++.+...|..+++.++...
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899888664
No 458
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=94.07 E-value=0.31 Score=43.87 Aligned_cols=81 Identities=17% Similarity=0.168 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecC-ChhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhcC--C
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~-~~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~~--~ 272 (390)
++.++||+|+ |.+|...+..+...|+ +|+++.+ ++++.+.+ +..+.+. .+..+-.+...+.+.+.+... +
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 9999999998888899 7776554 44443322 2333322 222222112233333333322 2
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
.+|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (247)
T PRK12935 84 KVDILVNNAGI 94 (247)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 459
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.07 E-value=0.28 Score=44.68 Aligned_cols=79 Identities=23% Similarity=0.222 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh-hhHH----HHHhcCCcE-EE--cCCCCCCcCHHHHHHhhcC-
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE----IGKKFGITD-FI--NPATCGDKTVSQVIKEMTD- 271 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~-~~~~----~~~~~g~~~-v~--~~~~~~~~~~~~~i~~~~~- 271 (390)
++.++||+|+ |.+|...++.+...|+ +|+.+.++. ++.+ .++..+... .+ |-.+ ...+.+.+.....
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~ 82 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV--ESDVVNLIQTAVKE 82 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC--HHHHHHHHHHHHHH
Confidence 5789999998 9999999999999999 787777643 3322 222334322 22 2222 1222333333222
Q ss_pred -CCccEEEEcccC
Q 016363 272 -GGADYCFECIGL 283 (390)
Q Consensus 272 -~g~D~vid~~g~ 283 (390)
+++|+++.+.|.
T Consensus 83 ~g~id~lv~~ag~ 95 (261)
T PRK08936 83 FGTLDVMINNAGI 95 (261)
T ss_pred cCCCCEEEECCCC
Confidence 379999998884
No 460
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.05 E-value=0.39 Score=44.58 Aligned_cols=68 Identities=18% Similarity=0.272 Sum_probs=50.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccCh
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~ 284 (390)
+|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|.-... . .+. +.+ ..+|+||-|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999998888888898 899999999998888777642111 1 111 111 2588999888865
Q ss_pred H
Q 016363 285 S 285 (390)
Q Consensus 285 ~ 285 (390)
.
T Consensus 69 ~ 69 (279)
T PRK07417 69 L 69 (279)
T ss_pred H
Confidence 5
No 461
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.03 E-value=0.56 Score=43.76 Aligned_cols=95 Identities=15% Similarity=0.227 Sum_probs=67.1
Q ss_pred hccccchhhHHHHHHHHhCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 181 CLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
..+||+....+. +.+..++ -.|.+|+|+|. +.+|.-.+.++...|+ +|++..+...
T Consensus 137 ~~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------- 194 (301)
T PRK14194 137 VLTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------- 194 (301)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC--------------------
Confidence 346665554444 3355554 46999999998 6999999999999999 8888754321
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
+..+..+ .+|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 --DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred --CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 2222332 4899999999887555443 8887 888888854
No 462
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.01 E-value=0.2 Score=51.00 Aligned_cols=72 Identities=17% Similarity=0.196 Sum_probs=50.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEc
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~ 280 (390)
.+.++||+|+|++|.+++..+...|+ +|+++.++.++.+.+. .++. ..+...+ + .+......|+++++
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~-~~~~~~~-----~----~~~~~~~~diiINt 446 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGG-QALTLAD-----L----ENFHPEEGMILANT 446 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCC-ceeeHhH-----h----hhhccccCeEEEec
Confidence 46789999999999999999999999 9999999988776664 3442 2222211 1 11111257899988
Q ss_pred ccCh
Q 016363 281 IGLT 284 (390)
Q Consensus 281 ~g~~ 284 (390)
++-.
T Consensus 447 T~vG 450 (529)
T PLN02520 447 TSVG 450 (529)
T ss_pred ccCC
Confidence 7643
No 463
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.00 E-value=0.52 Score=39.42 Aligned_cols=96 Identities=19% Similarity=0.255 Sum_probs=62.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCC---CCcCHHHHHHhhcCC-CccEEE
Q 016363 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC---GDKTVSQVIKEMTDG-GADYCF 278 (390)
Q Consensus 204 ~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~i~~~~~~-g~D~vi 278 (390)
.+|+|.|+ |++|.++++.-+..++ -|.-++-++... -....+++.++. .+....+++.+...+ ++|.||
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 46889998 9999999999999999 888877554332 122344443220 012234444555566 999999
Q ss_pred EcccChH--------------------------HHHHHHHHhccCCceEEEEcc
Q 016363 279 ECIGLTS--------------------------VMNDAFNSSREGWGKTVILGV 306 (390)
Q Consensus 279 d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~ 306 (390)
+-.|+-. ....+...|+++ |.+-+.|.
T Consensus 78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGA 130 (236)
T KOG4022|consen 78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGA 130 (236)
T ss_pred EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeeccc
Confidence 8777521 123445678888 88877764
No 464
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.00 E-value=0.28 Score=47.33 Aligned_cols=82 Identities=22% Similarity=0.268 Sum_probs=48.8
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEecCCh--hh--------------HHHHHhcCCc-EEEcCCCCCCc
Q 016363 201 EVGSTVAIFGL-GAVGLA--VAEGARLNRASKIIGVDINP--EK--------------FEIGKKFGIT-DFINPATCGDK 260 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~--ai~la~~~g~~~Vi~~~~~~--~~--------------~~~~~~~g~~-~v~~~~~~~~~ 260 (390)
..++++||+|+ +++|++ .++.+ ..|+ +|++++... .+ .+.+++.|.. ..+.-+-.++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 34678999998 899999 56666 8899 788877322 11 2234455644 23332221222
Q ss_pred CHHHHHHhhcC--CCccEEEEcccCh
Q 016363 261 TVSQVIKEMTD--GGADYCFECIGLT 284 (390)
Q Consensus 261 ~~~~~i~~~~~--~g~D~vid~~g~~ 284 (390)
...+.+.+... |++|+++++.+.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 33333333322 3799999999876
No 465
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.98 E-value=0.44 Score=47.41 Aligned_cols=80 Identities=18% Similarity=0.075 Sum_probs=58.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCC-cEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
....+++|+|.|.+|...++.+...|. .|++++.++++.+.+++.+. ..++.-+ ..-.+.+.+..-.++|.|+-
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~gd----~~~~~~L~~~~~~~a~~vi~ 303 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHGD----GTDQELLEEEGIDEADAFIA 303 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEECC----CCCHHHHHhcCCccCCEEEE
Confidence 346889999999999999999999999 99999999999888876432 2233222 22334455544448999998
Q ss_pred cccChH
Q 016363 280 CIGLTS 285 (390)
Q Consensus 280 ~~g~~~ 285 (390)
+++...
T Consensus 304 ~~~~~~ 309 (453)
T PRK09496 304 LTNDDE 309 (453)
T ss_pred CCCCcH
Confidence 887654
No 466
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=93.96 E-value=0.65 Score=42.29 Aligned_cols=34 Identities=32% Similarity=0.236 Sum_probs=30.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~ 235 (390)
-+|.+|+|.|-|.+|+.+++++..+|+ +|+++..
T Consensus 36 l~g~~vaIqGfGnVG~~~a~~L~e~Ga-kvvaVsD 69 (254)
T cd05313 36 LKGKRVAISGSGNVAQYAAEKLLELGA-KVVTLSD 69 (254)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEC
Confidence 367899999999999999999999999 9997764
No 467
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=93.94 E-value=0.51 Score=42.53 Aligned_cols=103 Identities=21% Similarity=0.275 Sum_probs=71.0
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEecCChhhHHHHHh----cCCcEEEcCCCCCCcCHHHHHHhh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----~g~~~v~~~~~~~~~~~~~~i~~~ 269 (390)
....++.+|++|+=.|.| .|.+++-||++.|. .+|+.....++..+.+++ +|....+.... .|..+.+.
T Consensus 87 ~~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv~~~~~-- 160 (256)
T COG2519 87 VARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDVREGID-- 160 (256)
T ss_pred HHHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cccccccc--
Confidence 367899999999988764 47777788887774 599999999988776643 44333222111 23222221
Q ss_pred cCCCccEEE-EcccChHHHHHHHHHhccCCceEEEEc
Q 016363 270 TDGGADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 270 ~~~g~D~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
...+|.|| |.-.-...++.+.+.|+++ |.++.+.
T Consensus 161 -~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~ 195 (256)
T COG2519 161 -EEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYS 195 (256)
T ss_pred -ccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEc
Confidence 12799887 6555556788999999999 9998775
No 468
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=93.91 E-value=0.17 Score=48.32 Aligned_cols=36 Identities=17% Similarity=0.119 Sum_probs=31.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
++.+|||+|+ |.+|...++.+...|. +|+++++.++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999998 9999999999999999 8999887643
No 469
>PLN02427 UDP-apiose/xylose synthase
Probab=93.91 E-value=0.24 Score=48.17 Aligned_cols=75 Identities=16% Similarity=0.208 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCC------cEEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGI------TDFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~------~~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
+..+|||+|+ |.+|...++.+... |. +|++++++.++.+.+...+. -.++..+- .+ .+.+.+... +
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~-~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl---~d-~~~l~~~~~-~ 86 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPH-KVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINI---KH-DSRLEGLIK-M 86 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCC-EEEEEecCchhhhhhhccccccCCCCeEEEEcCC---CC-hHHHHHHhh-c
Confidence 3467999998 99999999988877 57 89999988776655543321 11221111 11 122333322 5
Q ss_pred ccEEEEccc
Q 016363 274 ADYCFECIG 282 (390)
Q Consensus 274 ~D~vid~~g 282 (390)
+|+||.+++
T Consensus 87 ~d~ViHlAa 95 (386)
T PLN02427 87 ADLTINLAA 95 (386)
T ss_pred CCEEEEccc
Confidence 899999886
No 470
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=93.91 E-value=0.33 Score=45.00 Aligned_cols=96 Identities=9% Similarity=-0.004 Sum_probs=58.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcE-EEcCCCCCCcCHHHHHHhhcC-CC-ccEEEEc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD-GG-ADYCFEC 280 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~i~~~~~-~g-~D~vid~ 280 (390)
+|||+|+ |.+|..+++.+...|. +|.+++|++++.. ..+... ..|..+ ...+.+.++.... .+ +|.++.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~---~~~~~~~~~d~~d--~~~l~~a~~~~~~~~g~~d~v~~~ 74 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSA---GPNEKHVKFDWLD--EDTWDNPFSSDDGMEPEISAVYLV 74 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCcccc---CCCCccccccCCC--HHHHHHHHhcccCcCCceeEEEEe
Confidence 4899998 9999999999888898 8999999987642 123322 224333 2233333332111 26 8999877
Q ss_pred ccCh----HHHHHHHHHhccCC-ceEEEEcc
Q 016363 281 IGLT----SVMNDAFNSSREGW-GKTVILGV 306 (390)
Q Consensus 281 ~g~~----~~~~~~~~~l~~~~-G~~v~~g~ 306 (390)
.+.. ......++.++..+ .+++.++.
T Consensus 75 ~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 75 APPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 6632 12334555555541 36776653
No 471
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.89 E-value=0.42 Score=46.29 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
...+|+|+|+|++|..++..+...|..+++.++..
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45689999999999999999999999899998855
No 472
>PLN02214 cinnamoyl-CoA reductase
Probab=93.89 E-value=0.39 Score=45.94 Aligned_cols=38 Identities=21% Similarity=0.257 Sum_probs=33.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhh
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 239 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~ 239 (390)
.++.+|||+|+ |.+|...+..+...|. +|++++++.++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~ 46 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGY-TVKGTVRNPDD 46 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCchh
Confidence 35778999998 9999999999988999 99999987664
No 473
>PRK14982 acyl-ACP reductase; Provisional
Probab=93.89 E-value=0.25 Score=47.01 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=61.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEecCChhhHHHHH-hcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 201 EVGSTVAIFGL-GAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 201 ~~g~~VlI~Ga-g~vG~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
-.+.+|+|+|+ |.+|..+++.+. ..|.++++.+.+++++...+. +++...+ .++.+.+ ..+|+|
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i--------~~l~~~l-----~~aDiV 219 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI--------LSLEEAL-----PEADIV 219 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH--------HhHHHHH-----ccCCEE
Confidence 46789999999 999999888776 457669999999888776654 3321111 1222222 169999
Q ss_pred EEcccChHHHHHHHHHhccCCceEEEEcccC
Q 016363 278 FECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (390)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 308 (390)
+.+++....+..-...+++. -.+++++.+.
T Consensus 220 v~~ts~~~~~~I~~~~l~~~-~~viDiAvPR 249 (340)
T PRK14982 220 VWVASMPKGVEIDPETLKKP-CLMIDGGYPK 249 (340)
T ss_pred EECCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence 99998755332222455666 7778887553
No 474
>PRK07069 short chain dehydrogenase; Validated
Probab=93.87 E-value=0.21 Score=45.10 Aligned_cols=75 Identities=21% Similarity=0.283 Sum_probs=47.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHHH-hc----CCcE--EE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGK-KF----GITD--FI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 206 VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~-~~----g~~~--v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+||+|+ |.+|...++.+...|+ +|++++++ +++.+.+. .+ +... .+ |..+ ...+.+.+.+... +
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAMG 78 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 789998 9999999998888899 99999987 55544332 22 1111 11 2222 2233333333322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|+++.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (251)
T PRK07069 79 GLSVLVNNAGV 89 (251)
T ss_pred CccEEEECCCc
Confidence 79999999874
No 475
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.87 E-value=0.25 Score=46.28 Aligned_cols=86 Identities=15% Similarity=0.144 Sum_probs=54.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC-CcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG-DKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|+|+|+|.+|.+.+..+...|. +|+.+++++++.+.+++.|... +..+.. .........+. +.+|+||-++..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999998888888898 8999999888877776655421 100000 00000111111 379999999886
Q ss_pred hHHHHHHHHHhcc
Q 016363 284 TSVMNDAFNSSRE 296 (390)
Q Consensus 284 ~~~~~~~~~~l~~ 296 (390)
.. +..+++.+++
T Consensus 77 ~~-~~~~~~~l~~ 88 (304)
T PRK06522 77 YQ-LPAALPSLAP 88 (304)
T ss_pred cc-HHHHHHHHhh
Confidence 65 5555554443
No 476
>PRK07201 short chain dehydrogenase; Provisional
Probab=93.84 E-value=0.22 Score=52.09 Aligned_cols=78 Identities=24% Similarity=0.250 Sum_probs=52.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHH----hcCCcE-EE--cCCCCCCcCHHHHHHhhcC--C
Q 016363 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMTD--G 272 (390)
Q Consensus 203 g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~~g~~~-v~--~~~~~~~~~~~~~i~~~~~--~ 272 (390)
+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ..+... ++ |-.+ ..++.+.+.+... +
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD--SAAVDHTVKDILAEHG 447 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHhcC
Confidence 678999998 9999999998888899 9999999988765442 223322 22 2222 1233333433322 3
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 448 ~id~li~~Ag~ 458 (657)
T PRK07201 448 HVDYLVNNAGR 458 (657)
T ss_pred CCCEEEECCCC
Confidence 69999999884
No 477
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=93.83 E-value=0.27 Score=42.43 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=28.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
++||+|+ |++|+..++.+...+.++++.+.++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~ 34 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRS 34 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccC
Confidence 6899987 9999999999988888799999998
No 478
>PLN02256 arogenate dehydrogenase
Probab=93.83 E-value=0.96 Score=42.54 Aligned_cols=96 Identities=13% Similarity=0.137 Sum_probs=60.6
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCc
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGA 274 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~ 274 (390)
.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.+..+|... . .+..+.+ ....
T Consensus 28 ~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~-----~~~~e~~----~~~a 93 (304)
T PLN02256 28 QEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---F-----RDPDDFC----EEHP 93 (304)
T ss_pred hHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---e-----CCHHHHh----hCCC
Confidence 344444566789999999999999998888887 8999998864 35555666532 1 1222222 1247
Q ss_pred cEEEEcccChHHHHHHHHH-----hccCCceEEEEcc
Q 016363 275 DYCFECIGLTSVMNDAFNS-----SREGWGKTVILGV 306 (390)
Q Consensus 275 D~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 306 (390)
|+||-|+.... +...++. ++++ ..++.++.
T Consensus 94 DvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 94 DVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 88888887654 3333333 3344 55666653
No 479
>PLN03013 cysteine synthase
Probab=93.81 E-value=1.1 Score=44.05 Aligned_cols=56 Identities=20% Similarity=0.171 Sum_probs=42.8
Q ss_pred HHhCCCCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEec---CChhhHHHHHhcCCcEEE
Q 016363 196 KVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVD---INPEKFEIGKKFGITDFI 252 (390)
Q Consensus 196 ~~~~~~~g~~VlI~G-ag~vG~~ai~la~~~g~~~Vi~~~---~~~~~~~~~~~~g~~~v~ 252 (390)
+...+.+|.+.+|.. +|..|.+.+.+++.+|+ +++++. .+++|++.++.+|++.++
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~-~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGY-RLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCC-CEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 455578886666665 59999999999999999 555553 346788889999987664
No 480
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.81 E-value=0.61 Score=43.52 Aligned_cols=94 Identities=15% Similarity=0.215 Sum_probs=65.8
Q ss_pred hccccchhhHHHHHHHHhCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEec-CChhhHHHHHhcCCcEEEcCCCC
Q 016363 181 CLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKKFGITDFINPATC 257 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~-~~~~~~~~~~~~g~~~v~~~~~~ 257 (390)
..+||+....+..| +..+. -.|.+|+|+|- +.+|.-.+.++...|+ .|++.. +++
T Consensus 136 ~~~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~-------------------- 193 (296)
T PRK14188 136 ALVPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR-------------------- 193 (296)
T ss_pred CCcCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC--------------------
Confidence 34666655444433 44444 57999999995 9999999999999999 888874 332
Q ss_pred CCcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 258 ~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
++.+.++ .+|+|+-++|.+..+...+ ++++ ..++.+|..
T Consensus 194 ---~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 194 ---DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred ---CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 1222222 4899999999987555443 7877 888888854
No 481
>PLN02686 cinnamoyl-CoA reductase
Probab=93.79 E-value=0.32 Score=47.04 Aligned_cols=45 Identities=16% Similarity=0.026 Sum_probs=36.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 245 (390)
...+.+|||+|+ |.+|..++..+...|+ +|+++.++.++.+.++.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 445789999998 9999999999999999 89888877666554443
No 482
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.79 E-value=0.6 Score=43.19 Aligned_cols=95 Identities=21% Similarity=0.198 Sum_probs=66.2
Q ss_pred hccccchhhHHHHHHHHhCCC-CCCEEEEEcCC-hHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCC
Q 016363 181 CLLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 258 (390)
Q Consensus 181 a~~~~~~~tA~~~l~~~~~~~-~g~~VlI~Gag-~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~ 258 (390)
..+||+....+. +.+..++. .|.+|+|+|.| .+|.-.+.++...|+ +|.+.... .
T Consensus 135 ~~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~-------------------t-- 191 (285)
T PRK14191 135 GFVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL-------------------T-- 191 (285)
T ss_pred CCCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC-------------------c--
Confidence 346666554444 44555554 69999999985 899999999999999 88776321 1
Q ss_pred CcCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 259 ~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+|+-++|.+..+ --+.++++ ..++.+|..
T Consensus 192 -~~l~~~~~-----~ADIvV~AvG~p~~i--~~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 192 -KDLSFYTQ-----NADIVCVGVGKPDLI--KASMVKKG-AVVVDIGIN 231 (285)
T ss_pred -HHHHHHHH-----hCCEEEEecCCCCcC--CHHHcCCC-cEEEEeecc
Confidence 23333333 489999999987732 24567887 889999854
No 483
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.78 E-value=1.2 Score=38.51 Aligned_cols=97 Identities=20% Similarity=0.263 Sum_probs=60.8
Q ss_pred HHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHHHhh
Q 016363 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKEM 269 (390)
Q Consensus 196 ~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~~~ 269 (390)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++. . +... .
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~-~-----d~~~----~ 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP-G-----EAPI----E 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe-c-----Cchh----h
Confidence 556778899999888743 5555666665532399999999987776643 33322 222 1 1111 1
Q ss_pred cCCCccEEEEcccC---hHHHHHHHHHhccCCceEEEE
Q 016363 270 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL 304 (390)
Q Consensus 270 ~~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 304 (390)
..+.+|+|+..... ...+..+.+.|+++ |+++..
T Consensus 94 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 94 LPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred cCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 12379999854321 12356788999998 988754
No 484
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.74 E-value=0.46 Score=47.28 Aligned_cols=75 Identities=17% Similarity=0.302 Sum_probs=55.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh-cCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
+|+|+|+|.+|...++.+...|. .|+++++++++.+.+++ .+...+.. +. .-...+.+..-+++|.++-+++.
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~g-d~----~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVVG-NG----SSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEEe-CC----CCHHHHHHcCCCcCCEEEEecCC
Confidence 68999999999999999999998 89999999999888876 55444332 21 22334444433489999998887
Q ss_pred hH
Q 016363 284 TS 285 (390)
Q Consensus 284 ~~ 285 (390)
..
T Consensus 76 ~~ 77 (453)
T PRK09496 76 DE 77 (453)
T ss_pred hH
Confidence 55
No 485
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=93.73 E-value=0.31 Score=46.77 Aligned_cols=48 Identities=19% Similarity=0.175 Sum_probs=37.8
Q ss_pred hHHHHHHHHhCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChh
Q 016363 189 TGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (390)
Q Consensus 189 tA~~~l~~~~~~~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~ 238 (390)
|||.-+.....++ +.+|||+|+ |.+|...+..+...|. +|+++++...
T Consensus 2 ~~~~~~~~~~~~~-~~~vlVtGatGfiG~~lv~~L~~~g~-~V~~~d~~~~ 50 (348)
T PRK15181 2 TAYEELRTKLVLA-PKRWLITGVAGFIGSGLLEELLFLNQ-TVIGLDNFST 50 (348)
T ss_pred chhhhhhhccccc-CCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 6777654444444 468999998 9999999999998898 9999987554
No 486
>PRK06436 glycerate dehydrogenase; Provisional
Probab=93.73 E-value=0.43 Score=44.81 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=32.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCCh
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~ 237 (390)
.|.+|.|+|.|.+|...+++++..|. +|++.+++.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~ 155 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY 155 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 58999999999999999999999999 999999763
No 487
>PLN02735 carbamoyl-phosphate synthase
Probab=93.73 E-value=0.53 Score=52.15 Aligned_cols=98 Identities=16% Similarity=0.213 Sum_probs=58.7
Q ss_pred cchhhHHHHHHHHhCCCCCCEEEEEcCCh--H---------HHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEE-
Q 016363 185 CGVSTGVGAAWKVAGVEVGSTVAIFGLGA--V---------GLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI- 252 (390)
Q Consensus 185 ~~~~tA~~~l~~~~~~~~g~~VlI~Gag~--v---------G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~- 252 (390)
.++..||.+...-.+-..=.+|||+|+|+ + |..++..++.+|+ +|+.++.++.....-..+ ++++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~yi 82 (1102)
T PLN02735 5 DTVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTYI 82 (1102)
T ss_pred ccceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEEe
Confidence 34555676542323333346899999977 4 4457888889999 999999887542111112 34332
Q ss_pred cCCCCCCcCHHHHHHhhcCC-CccEEEEcccChHHHHHH
Q 016363 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDA 290 (390)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-g~D~vid~~g~~~~~~~~ 290 (390)
.+.+ . +.+.++... ++|.|+-+.|+..++..+
T Consensus 83 ~p~~---~---e~v~~ii~~e~~D~Iip~~gg~~gl~la 115 (1102)
T PLN02735 83 APMT---P---ELVEQVIAKERPDALLPTMGGQTALNLA 115 (1102)
T ss_pred CCCC---H---HHHHHHHHHhCCCEEEECCCchhhHHHH
Confidence 2222 2 234443333 899999998877655433
No 488
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.68 E-value=0.84 Score=43.00 Aligned_cols=89 Identities=22% Similarity=0.299 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEE
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid 279 (390)
.-.|.+|.|+|-|.+|.+.++.++..|. +|++..+.....+.+...|... . ++.+.+. ..|+|+-
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~v-~--------sl~Eaak-----~ADVV~l 77 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFEV-M--------SVSEAVR-----TAQVVQM 77 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCEE-C--------CHHHHHh-----cCCEEEE
Confidence 3468999999999999999999999999 8888776555555666666521 1 2333333 5899998
Q ss_pred cccChHH---H-HHHHHHhccCCceEEEEc
Q 016363 280 CIGLTSV---M-NDAFNSSREGWGKTVILG 305 (390)
Q Consensus 280 ~~g~~~~---~-~~~~~~l~~~~G~~v~~g 305 (390)
+++.+.. + ...+..|+++ .++.++
T Consensus 78 lLPd~~t~~V~~~eil~~MK~G--aiL~f~ 105 (335)
T PRK13403 78 LLPDEQQAHVYKAEVEENLREG--QMLLFS 105 (335)
T ss_pred eCCChHHHHHHHHHHHhcCCCC--CEEEEC
Confidence 8876442 1 2345666654 444443
No 489
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=93.67 E-value=0.21 Score=45.31 Aligned_cols=105 Identities=17% Similarity=0.201 Sum_probs=63.1
Q ss_pred HHHHhCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEecCChhhHHHHHh----cCCc--EEEcCCCCCCcCHHH-H
Q 016363 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQ-V 265 (390)
Q Consensus 194 l~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----~g~~--~v~~~~~~~~~~~~~-~ 265 (390)
+...+++.||++|+=.|.| .|.++..+++..| -.+|+..+.++++.+.+++ +|.. ..+... |+.+ .
T Consensus 32 I~~~l~i~pG~~VlEaGtG-SG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-----Dv~~~g 105 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTG-SGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-----DVCEEG 105 (247)
T ss_dssp HHHHTT--TT-EEEEE--T-TSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES------GGCG-
T ss_pred HHHHcCCCCCCEEEEecCC-cHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-----ceeccc
Confidence 3467899999999998753 3555566666655 2389999999998877643 5543 222222 2211 1
Q ss_pred HHhhcCCCccEEE-EcccChHHHHHHHHHh-ccCCceEEEEc
Q 016363 266 IKEMTDGGADYCF-ECIGLTSVMNDAFNSS-REGWGKTVILG 305 (390)
Q Consensus 266 i~~~~~~g~D~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~g 305 (390)
..+-....+|.|| |--.-..++..+.+.| +++ |+++.+.
T Consensus 106 ~~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fs 146 (247)
T PF08704_consen 106 FDEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFS 146 (247)
T ss_dssp -STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEE
T ss_pred ccccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEEC
Confidence 1100123689987 5554455789999999 788 9998885
No 490
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=93.56 E-value=0.3 Score=51.25 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=47.6
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEE
Q 016363 200 VEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 277 (390)
Q Consensus 200 ~~~g~~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~v 277 (390)
.+++.+|||+|+ |.+|...++.+... |. +|+++++.+...........-.++..+- .+..+.+.+... ++|+|
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~-~V~~l~r~~~~~~~~~~~~~~~~~~gDl---~d~~~~l~~~l~-~~D~V 386 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNY-EVYGLDIGSDAISRFLGHPRFHFVEGDI---SIHSEWIEYHIK-KCDVV 386 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCc-EEEEEeCCchhhhhhcCCCceEEEeccc---cCcHHHHHHHhc-CCCEE
Confidence 457889999998 99999999888765 68 9999998765433222111112222111 111112222222 69999
Q ss_pred EEccc
Q 016363 278 FECIG 282 (390)
Q Consensus 278 id~~g 282 (390)
|.+++
T Consensus 387 iHlAa 391 (660)
T PRK08125 387 LPLVA 391 (660)
T ss_pred EECcc
Confidence 99776
No 491
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.53 E-value=0.7 Score=42.81 Aligned_cols=94 Identities=16% Similarity=0.235 Sum_probs=66.0
Q ss_pred ccccchhhHHHHHHHHhCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCC
Q 016363 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (390)
Q Consensus 182 ~~~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 259 (390)
.+||+....+. +.+..++ -.|.+|+|+|. ..+|.-.+.++...|+ +|+...+ ..
T Consensus 137 ~~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs-------------------~t--- 192 (285)
T PRK14189 137 FRPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHS-------------------KT--- 192 (285)
T ss_pred CcCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecC-------------------CC---
Confidence 45665444443 3355554 47999999998 5569999999999999 8887532 11
Q ss_pred cCHHHHHHhhcCCCccEEEEcccChHHHHHHHHHhccCCceEEEEccc
Q 016363 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (390)
Q Consensus 260 ~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 307 (390)
.++.+.++ .+|+|+-++|.+..+. -+.++++ ..++.+|..
T Consensus 193 ~~l~~~~~-----~ADIVV~avG~~~~i~--~~~ik~g-avVIDVGin 232 (285)
T PRK14189 193 RDLAAHTR-----QADIVVAAVGKRNVLT--ADMVKPG-ATVIDVGMN 232 (285)
T ss_pred CCHHHHhh-----hCCEEEEcCCCcCccC--HHHcCCC-CEEEEcccc
Confidence 34444443 4899999999877333 3789988 899999854
No 492
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=93.53 E-value=0.38 Score=45.97 Aligned_cols=73 Identities=15% Similarity=0.213 Sum_probs=44.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEccc
Q 016363 205 TVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g 282 (390)
+|||+|+ |.+|...++.+... |. +|++++++.++...+.....-.++..+-.++..+ +.++.. ++|+||++++
T Consensus 3 ~ilVtGatGfiGs~l~~~L~~~~~~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~---~~~~~~-~~d~ViH~aa 77 (347)
T PRK11908 3 KVLILGVNGFIGHHLSKRILETTDW-EVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEW---IEYHVK-KCDVILPLVA 77 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCC-eEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHH---HHHHHc-CCCEEEECcc
Confidence 6999998 99999999888765 67 8999998766544332211112222111001122 222222 6999999765
No 493
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.53 E-value=0.38 Score=43.69 Aligned_cols=79 Identities=22% Similarity=0.270 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCCh----hhHHH----HHhcCCcE-EE--cCCCCCCcCHHHHHHhh
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEI----GKKFGITD-FI--NPATCGDKTVSQVIKEM 269 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~----~~~~~----~~~~g~~~-v~--~~~~~~~~~~~~~i~~~ 269 (390)
.+.++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+. ++..+.+. .+ |..+ ..++.+.+.+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~ 83 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTT--AAAVEKLFDDA 83 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCC--HHHHHHHHHHH
Confidence 4678999998 9999999999888999 666665332 22221 22234332 22 2222 12233333332
Q ss_pred cC--CCccEEEEcccC
Q 016363 270 TD--GGADYCFECIGL 283 (390)
Q Consensus 270 ~~--~g~D~vid~~g~ 283 (390)
.. +++|++|.+.|.
T Consensus 84 ~~~~~~id~li~~ag~ 99 (257)
T PRK12744 84 KAAFGRPDIAINTVGK 99 (257)
T ss_pred HHhhCCCCEEEECCcc
Confidence 22 379999998885
No 494
>PRK01581 speE spermidine synthase; Validated
Probab=93.52 E-value=1.3 Score=42.51 Aligned_cols=97 Identities=15% Similarity=0.083 Sum_probs=62.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcC-----------CcE--EEcCCCCCCcCHHHHH
Q 016363 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----------ITD--FINPATCGDKTVSQVI 266 (390)
Q Consensus 200 ~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g-----------~~~--v~~~~~~~~~~~~~~i 266 (390)
.....+|||+|+| .|.++..+++.-+..+|++++.+++-.+.++++. ... ++. .|..+.+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi------~Da~~fL 220 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV------CDAKEFL 220 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE------CcHHHHH
Confidence 4455799999965 5556777777666569999999999888888521 011 111 2334444
Q ss_pred HhhcCCCccEEEEcccCh-----------HHHHHHHHHhccCCceEEEEc
Q 016363 267 KEMTDGGADYCFECIGLT-----------SVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 267 ~~~~~~g~D~vid~~g~~-----------~~~~~~~~~l~~~~G~~v~~g 305 (390)
.+ ..+.+|+||--...+ ..+..+.+.|+++ |.++.-.
T Consensus 221 ~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs 268 (374)
T PRK01581 221 SS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS 268 (374)
T ss_pred Hh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 33 334899998332221 1356788899999 9887654
No 495
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=93.52 E-value=0.33 Score=42.98 Aligned_cols=98 Identities=16% Similarity=0.136 Sum_probs=62.1
Q ss_pred HHHhCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCcE--EEcCCCCCCcCHHHHHHh
Q 016363 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKE 268 (390)
Q Consensus 195 ~~~~~~~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~~--v~~~~~~~~~~~~~~i~~ 268 (390)
....+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ .+... ++.. +..+.
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~------d~~~~--- 138 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG------DGWKG--- 138 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC------CcccC---
Confidence 3667889999999998753 44444555553 3 89999999887665543 34322 2211 11111
Q ss_pred hcC-CCccEEEEcccChHHHHHHHHHhccCCceEEEEc
Q 016363 269 MTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 269 ~~~-~g~D~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 305 (390)
+.. +.+|+|+.............+.|+++ |+++..-
T Consensus 139 ~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 139 WPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 112 37999986555445467788999998 9886543
No 496
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=93.50 E-value=2.8 Score=41.41 Aligned_cols=35 Identities=26% Similarity=0.216 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
-.|.+|+|.|.|.+|..+++.+..+|+ +|++++.+
T Consensus 235 l~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~ 269 (454)
T PTZ00079 235 LEGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDS 269 (454)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcC
Confidence 368899999999999999999999999 88855433
No 497
>PRK06932 glycerate dehydrogenase; Provisional
Probab=93.47 E-value=0.45 Score=45.00 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=31.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCC
Q 016363 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (390)
Q Consensus 202 ~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~ 236 (390)
.|.+|.|+|.|.+|...+++++.+|+ +|++.++.
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~ 179 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHK 179 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCC
Confidence 47899999999999999999999999 99998764
No 498
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.45 E-value=0.45 Score=43.24 Aligned_cols=81 Identities=11% Similarity=0.094 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCC-hhhHHHH----HhcCCcE-EEcCCCCCCcCHHHHHHhhc--CC
Q 016363 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DG 272 (390)
Q Consensus 202 ~g~~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~-~~~~~~~----~~~g~~~-v~~~~~~~~~~~~~~i~~~~--~~ 272 (390)
.+.++||+|+ |.+|...++.+...|+ +|+++.+. .++.+.+ +..+... .+..+-.+...+.+.+.+.. .+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999998 9999999998888998 78776653 3443322 2224321 22111101123333333322 13
Q ss_pred CccEEEEcccC
Q 016363 273 GADYCFECIGL 283 (390)
Q Consensus 273 g~D~vid~~g~ 283 (390)
++|++|.+.|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 79999999874
No 499
>PLN02244 tocopherol O-methyltransferase
Probab=93.44 E-value=0.52 Score=45.10 Aligned_cols=94 Identities=17% Similarity=0.259 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHh----cCCc---EEEcCCCCCCcCHHHHHHhhcCCC
Q 016363 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTDGG 273 (390)
Q Consensus 201 ~~g~~VlI~Gag~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----~g~~---~v~~~~~~~~~~~~~~i~~~~~~g 273 (390)
+++++||=+|+| .|..+..+++..|+ +|++++.++...+.+++ .+.. .++.. +..+ + .+.++.
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~------D~~~-~-~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVA------DALN-Q-PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc------Cccc-C-CCCCCC
Confidence 788999999885 35566777777788 99999999987766654 2321 11111 1110 0 112337
Q ss_pred ccEEEEcccC------hHHHHHHHHHhccCCceEEEEc
Q 016363 274 ADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (390)
Q Consensus 274 ~D~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 305 (390)
||+|+..-.. ...+..+.+.|+++ |+++...
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~ 223 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVT 223 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 9999864332 22467888999999 9998764
No 500
>PRK07578 short chain dehydrogenase; Provisional
Probab=93.43 E-value=1.2 Score=38.78 Aligned_cols=63 Identities=14% Similarity=0.285 Sum_probs=39.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEecCChhhHHHHHhcCCcEEEcCCCCCCcCHHHHHHhhcCCCccEEEEcccC
Q 016363 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (390)
Q Consensus 205 ~VlI~Ga-g~vG~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~ 283 (390)
++||+|+ |++|...+..+... . +|+.+++++.. .-.|-.+ ..++.+.+.++ +++|+++.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~~----------~~~D~~~--~~~~~~~~~~~--~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSGD----------VQVDITD--PASIRALFEKV--GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCCc----------eEecCCC--hHHHHHHHHhc--CCCCEEEECCCC
Confidence 6899998 99999888776655 6 89999887531 1223222 12222323221 378999988874
Done!