Query 016367
Match_columns 390
No_of_seqs 148 out of 1661
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 12:23:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016367.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016367hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.3 5.9E-09 2E-13 94.7 28.1 231 101-378 51-296 (306)
2 2xn4_A Kelch-like protein 2; s 99.2 3.1E-09 1E-13 96.4 22.5 213 102-362 58-283 (302)
3 2vpj_A Kelch-like protein 12; 99.2 6.5E-09 2.2E-13 94.1 24.6 211 101-361 58-284 (301)
4 1zgk_A Kelch-like ECH-associat 99.2 1E-08 3.5E-13 93.3 25.6 211 102-362 67-294 (308)
5 2woz_A Kelch repeat and BTB do 99.2 2.1E-08 7.1E-13 91.6 26.0 215 100-361 51-293 (318)
6 4asc_A Kelch repeat and BTB do 99.2 4.6E-08 1.6E-12 89.2 28.3 216 100-361 40-283 (315)
7 2vpj_A Kelch-like protein 12; 99.1 2.7E-08 9.3E-13 90.0 23.0 214 116-379 30-256 (301)
8 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 7.2E-11 2.5E-15 77.2 3.6 42 1-42 9-50 (53)
9 2xn4_A Kelch-like protein 2; s 99.0 4.8E-08 1.6E-12 88.4 21.9 197 116-362 29-236 (302)
10 3ii7_A Kelch-like protein 7; p 99.0 5.7E-08 1.9E-12 88.1 22.0 196 116-361 23-231 (306)
11 1zgk_A Kelch-like ECH-associat 99.0 2.6E-08 9E-13 90.5 19.1 201 116-362 38-247 (308)
12 2uvk_A YJHT; unknown function, 99.0 3.7E-08 1.3E-12 91.4 20.3 241 102-379 16-319 (357)
13 2e31_A FBS1, F-box only protei 99.0 9.4E-11 3.2E-15 104.2 2.4 48 1-48 51-99 (297)
14 2woz_A Kelch repeat and BTB do 98.9 2.1E-07 7.3E-12 84.8 22.9 222 118-380 25-257 (318)
15 4asc_A Kelch repeat and BTB do 98.9 3.7E-07 1.3E-11 83.1 20.9 222 117-379 13-246 (315)
16 3v7d_B Cell division control p 98.8 1.4E-05 4.7E-10 76.4 29.4 36 2-37 16-51 (464)
17 2ovr_B FBW7, F-BOX/WD repeat p 98.7 2.4E-05 8.1E-10 74.4 29.9 46 1-46 19-64 (445)
18 2uvk_A YJHT; unknown function, 98.7 1.6E-06 5.4E-11 80.3 19.5 225 101-361 61-348 (357)
19 2zwa_A Leucine carboxyl methyl 98.5 5E-06 1.7E-10 84.1 20.3 212 104-363 396-643 (695)
20 1p22_A F-BOX/WD-repeat protein 98.5 9.6E-06 3.3E-10 77.0 21.0 42 2-43 12-57 (435)
21 1k3i_A Galactose oxidase precu 98.2 3.5E-05 1.2E-09 77.4 16.4 122 105-246 197-329 (656)
22 3l2o_B F-box only protein 4; s 97.9 1.3E-06 4.5E-11 76.7 -0.2 49 2-50 6-54 (312)
23 2zwa_A Leucine carboxyl methyl 97.8 0.00046 1.6E-08 69.7 15.9 173 179-380 411-611 (695)
24 1k3i_A Galactose oxidase precu 97.7 0.0004 1.4E-08 69.7 14.3 206 119-361 168-384 (656)
25 2ast_B S-phase kinase-associat 97.4 5.2E-05 1.8E-09 69.3 2.8 41 1-41 9-49 (336)
26 2p1m_B Transport inhibitor res 96.8 0.00036 1.2E-08 68.9 2.1 34 1-34 6-40 (594)
27 3ogk_B Coronatine-insensitive 96.3 0.0012 4.2E-08 65.1 2.1 34 2-35 14-48 (592)
28 3dsm_A Uncharacterized protein 94.0 3.2 0.00011 37.0 19.5 197 105-360 2-217 (328)
29 2z2n_A Virginiamycin B lyase; 92.1 5.1 0.00018 34.3 19.0 193 100-359 104-299 (299)
30 3jrp_A Fusion protein of prote 91.7 6.9 0.00023 34.7 20.5 141 180-357 79-242 (379)
31 3bws_A Protein LP49; two-domai 91.1 8.8 0.0003 35.0 19.8 196 103-361 178-396 (433)
32 3ei3_B DNA damage-binding prot 91.0 8.4 0.00029 34.6 20.7 186 116-358 95-285 (383)
33 4gqb_B Methylosome protein 50; 90.6 9.2 0.00031 34.2 17.8 210 104-376 92-308 (344)
34 4e54_B DNA damage-binding prot 89.9 6.1 0.00021 36.5 14.0 187 116-359 141-331 (435)
35 4gga_A P55CDC, cell division c 89.6 12 0.00042 34.2 18.4 147 103-286 114-261 (420)
36 3jro_A Fusion protein of prote 89.4 19 0.00065 36.1 19.0 141 180-357 77-240 (753)
37 3hfq_A Uncharacterized protein 89.2 11 0.00037 33.3 14.7 124 213-361 50-178 (347)
38 1l0q_A Surface layer protein; 87.8 15 0.00051 32.9 19.5 188 103-359 40-237 (391)
39 3dwl_C Actin-related protein 2 87.1 16 0.00054 32.5 14.8 194 116-358 32-239 (377)
40 4aez_A CDC20, WD repeat-contai 87.1 17 0.00059 32.9 20.6 182 116-360 112-298 (401)
41 1q7f_A NHL, brain tumor CG1071 87.0 13 0.00046 31.6 23.2 203 103-363 38-246 (286)
42 3q7m_A Lipoprotein YFGL, BAMB; 86.3 8.1 0.00028 34.8 12.1 142 181-361 64-213 (376)
43 3q7m_A Lipoprotein YFGL, BAMB; 86.1 10 0.00035 34.1 12.7 116 207-361 47-168 (376)
44 1l0q_A Surface layer protein; 85.2 20 0.00069 31.9 19.3 179 116-361 95-281 (391)
45 1yfq_A Cell cycle arrest prote 85.0 19 0.00064 31.3 19.9 197 116-360 78-287 (342)
46 3sjl_D Methylamine dehydrogena 83.0 22 0.00074 32.6 13.2 111 213-360 237-368 (386)
47 4g56_B MGC81050 protein; prote 82.3 27 0.00091 31.1 15.5 210 104-376 104-320 (357)
48 1ri6_A Putative isomerase YBHE 82.1 24 0.00083 30.5 18.6 143 180-361 60-217 (343)
49 3g4e_A Regucalcin; six bladed 81.9 24 0.00083 30.4 20.4 206 102-363 21-238 (297)
50 3e5z_A Putative gluconolactona 81.5 25 0.00084 30.1 21.1 192 116-364 49-255 (296)
51 1k8k_C P40, ARP2/3 complex 41 81.1 28 0.00095 30.6 18.9 68 265-361 213-282 (372)
52 3m0c_C LDL receptor, low-densi 81.0 50 0.0017 33.4 20.9 157 180-379 493-656 (791)
53 3fm0_A Protein CIAO1; WDR39,SG 80.5 30 0.001 30.5 16.7 159 180-375 38-202 (345)
54 1gxr_A ESG1, transducin-like e 79.6 29 0.00099 29.8 21.2 195 104-361 61-261 (337)
55 3vgz_A Uncharacterized protein 79.4 31 0.0011 30.0 23.4 203 101-361 96-309 (353)
56 3hrp_A Uncharacterized protein 78.9 22 0.00075 32.7 12.0 112 213-361 141-255 (409)
57 3nol_A Glutamine cyclotransfer 78.8 31 0.0011 29.7 13.3 125 198-363 36-164 (262)
58 2hqs_A Protein TOLB; TOLB, PAL 78.7 39 0.0013 30.8 20.2 182 117-361 203-393 (415)
59 1nir_A Nitrite reductase; hemo 78.5 48 0.0016 31.7 19.6 105 232-359 347-462 (543)
60 2ojh_A Uncharacterized protein 77.5 30 0.001 28.8 19.9 200 103-362 50-265 (297)
61 3fm0_A Protein CIAO1; WDR39,SG 77.0 36 0.0012 29.9 12.7 85 265-375 27-113 (345)
62 3bws_A Protein LP49; two-domai 76.7 21 0.00072 32.4 11.3 100 232-360 145-248 (433)
63 3dsm_A Uncharacterized protein 76.6 39 0.0013 29.6 23.3 191 105-359 53-257 (328)
64 2bkl_A Prolyl endopeptidase; m 76.6 61 0.0021 31.9 19.3 143 117-286 202-349 (695)
65 3no2_A Uncharacterized protein 76.1 36 0.0012 29.1 14.6 182 116-360 14-200 (276)
66 3mbr_X Glutamine cyclotransfer 74.6 39 0.0013 28.7 16.1 116 207-363 23-142 (243)
67 2dg1_A DRP35, lactonase; beta 74.1 37 0.0013 29.4 11.8 114 213-361 55-177 (333)
68 4e54_B DNA damage-binding prot 74.0 53 0.0018 30.0 17.3 30 331-360 406-435 (435)
69 1nir_A Nitrite reductase; hemo 73.0 67 0.0023 30.7 17.9 194 105-361 148-361 (543)
70 2ojh_A Uncharacterized protein 72.8 40 0.0014 28.0 18.6 137 116-286 21-160 (297)
71 3scy_A Hypothetical bacterial 72.3 50 0.0017 29.0 21.8 102 232-361 234-345 (361)
72 1q7f_A NHL, brain tumor CG1071 71.4 45 0.0016 28.1 21.3 191 103-355 86-280 (286)
73 3v7d_B Cell division control p 70.5 64 0.0022 29.4 14.9 93 232-360 333-426 (464)
74 1pjx_A Dfpase, DIISOPROPYLFLUO 70.3 50 0.0017 28.1 22.3 200 116-362 45-264 (314)
75 3nok_A Glutaminyl cyclase; bet 70.0 53 0.0018 28.3 12.2 113 207-363 57-173 (268)
76 3bg1_A Protein SEC13 homolog; 69.8 54 0.0019 28.3 15.5 29 267-299 180-208 (316)
77 1rwi_B Serine/threonine-protei 69.7 47 0.0016 27.6 11.1 136 180-360 46-185 (270)
78 2dg1_A DRP35, lactonase; beta 69.5 55 0.0019 28.3 20.4 211 104-363 54-271 (333)
79 3u4y_A Uncharacterized protein 68.1 58 0.002 28.0 21.7 192 105-358 9-210 (331)
80 3hfq_A Uncharacterized protein 67.4 63 0.0021 28.1 25.6 149 180-362 162-326 (347)
81 3e5z_A Putative gluconolactona 66.8 59 0.002 27.6 11.7 58 213-284 38-97 (296)
82 1k8k_C P40, ARP2/3 complex 41 65.9 68 0.0023 27.9 20.8 190 116-360 29-238 (372)
83 1ri6_A Putative isomerase YBHE 64.2 69 0.0023 27.4 22.5 149 180-362 151-317 (343)
84 3v65_B Low-density lipoprotein 64.0 84 0.0029 28.4 19.9 147 101-285 123-274 (386)
85 3fvz_A Peptidyl-glycine alpha- 63.8 74 0.0025 27.7 18.0 122 104-250 100-238 (329)
86 1got_B GT-beta; complex (GTP-b 63.2 76 0.0026 27.6 21.5 94 232-358 165-260 (340)
87 2pm9_A Protein WEB1, protein t 62.4 85 0.0029 27.9 15.4 189 116-358 135-340 (416)
88 2p4o_A Hypothetical protein; p 62.2 76 0.0026 27.3 12.8 59 213-285 42-101 (306)
89 1rwi_B Serine/threonine-protei 62.1 67 0.0023 26.6 19.1 189 103-358 75-267 (270)
90 3i2n_A WD repeat-containing pr 61.8 78 0.0027 27.3 18.5 204 103-358 126-356 (357)
91 3o4h_A Acylamino-acid-releasin 61.6 1.1E+02 0.0038 29.0 13.3 149 105-284 122-274 (582)
92 3hrp_A Uncharacterized protein 61.2 98 0.0033 28.2 20.1 212 103-361 139-360 (409)
93 2mad_H Methylamine dehydrogena 61.1 93 0.0032 27.9 13.0 56 279-361 298-356 (373)
94 3fvz_A Peptidyl-glycine alpha- 60.7 84 0.0029 27.3 20.0 169 100-287 149-323 (329)
95 3jrp_A Fusion protein of prote 60.2 86 0.0029 27.2 16.7 116 232-377 34-157 (379)
96 3lrv_A PRE-mRNA-splicing facto 60.1 87 0.003 27.2 12.9 32 328-359 173-205 (343)
97 3g4e_A Regucalcin; six bladed 59.9 82 0.0028 26.9 12.7 47 213-272 24-71 (297)
98 2aq5_A Coronin-1A; WD40 repeat 58.7 1E+02 0.0034 27.5 22.9 185 116-357 56-256 (402)
99 2aq5_A Coronin-1A; WD40 repeat 57.8 1E+02 0.0035 27.4 23.1 202 105-362 93-308 (402)
100 3v9f_A Two-component system se 57.7 1.6E+02 0.0053 29.4 21.5 143 181-361 470-617 (781)
101 3dr2_A Exported gluconolactona 57.6 52 0.0018 28.3 9.2 57 213-283 55-113 (305)
102 4g56_B MGC81050 protein; prote 57.3 1E+02 0.0035 27.2 17.6 189 103-356 148-344 (357)
103 2ad6_A Methanol dehydrogenase 56.1 91 0.0031 30.0 11.4 120 207-361 56-191 (571)
104 3mbr_X Glutamine cyclotransfer 54.9 96 0.0033 26.2 17.4 144 179-364 42-189 (243)
105 3jro_A Fusion protein of prote 54.7 1.7E+02 0.0059 29.0 16.2 116 232-377 32-155 (753)
106 4aez_A CDC20, WD repeat-contai 54.2 1.2E+02 0.0041 27.0 20.0 102 232-366 240-348 (401)
107 2qc5_A Streptogramin B lactona 53.9 96 0.0033 25.9 20.5 197 100-363 67-267 (300)
108 1kb0_A Quinohemoprotein alcoho 53.5 61 0.0021 32.0 9.8 122 207-361 71-205 (677)
109 1kv9_A Type II quinohemoprotei 53.1 1E+02 0.0036 30.2 11.5 119 207-361 60-193 (668)
110 3vgz_A Uncharacterized protein 53.0 1.1E+02 0.0038 26.3 21.4 188 116-361 68-268 (353)
111 3odt_A Protein DOA1; ubiquitin 52.4 1E+02 0.0035 25.8 20.4 95 232-361 206-302 (313)
112 2fp8_A Strictosidine synthase; 52.0 1.2E+02 0.004 26.2 14.1 141 117-286 165-313 (322)
113 2hqs_A Protein TOLB; TOLB, PAL 51.9 1.4E+02 0.0047 27.1 20.0 183 117-361 159-350 (415)
114 1r5m_A SIR4-interacting protei 51.0 1.3E+02 0.0044 26.5 22.7 96 232-361 228-325 (425)
115 3mmy_A MRNA export factor; mRN 50.3 1.2E+02 0.0042 26.0 20.3 33 328-360 276-309 (368)
116 3no2_A Uncharacterized protein 50.1 1.2E+02 0.004 25.8 13.6 147 179-362 14-162 (276)
117 3p5b_L Low density lipoprotein 50.0 1.5E+02 0.0051 26.9 18.0 50 213-273 170-221 (400)
118 1yiq_A Quinohemoprotein alcoho 49.6 1.3E+02 0.0044 29.8 11.5 121 207-361 64-198 (689)
119 3mmy_A MRNA export factor; mRN 47.9 1.3E+02 0.0045 25.7 10.6 69 266-361 54-123 (368)
120 3v65_B Low-density lipoprotein 47.6 1.6E+02 0.0054 26.5 22.1 140 105-285 87-231 (386)
121 3dwl_C Actin-related protein 2 47.4 1.4E+02 0.0049 25.9 15.6 68 265-357 216-283 (377)
122 3odt_A Protein DOA1; ubiquitin 46.8 1.3E+02 0.0043 25.2 25.9 182 116-360 38-219 (313)
123 3dm0_A Maltose-binding peripla 46.7 2.1E+02 0.0073 27.8 21.3 95 232-360 542-637 (694)
124 1r5m_A SIR4-interacting protei 45.7 1.6E+02 0.0054 25.9 17.8 141 105-286 217-361 (425)
125 3v64_C Agrin; beta propeller, 45.6 1.6E+02 0.0055 26.0 22.0 147 101-285 80-231 (349)
126 2fp8_A Strictosidine synthase; 45.1 1.5E+02 0.0051 25.5 18.6 33 332-364 235-278 (322)
127 4aow_A Guanine nucleotide-bind 44.3 1.5E+02 0.005 25.2 12.4 94 232-359 196-290 (340)
128 3hxj_A Pyrrolo-quinoline quino 44.3 49 0.0017 28.4 6.9 31 330-360 259-289 (330)
129 3s94_A LRP-6, low-density lipo 44.1 2.3E+02 0.008 27.5 23.6 151 101-288 47-202 (619)
130 2iwa_A Glutamine cyclotransfer 44.0 1.5E+02 0.0052 25.3 15.5 97 232-363 45-144 (266)
131 2hes_X YDR267CP; beta-propelle 43.3 1.6E+02 0.0055 25.3 11.6 87 265-376 118-206 (330)
132 1jmx_B Amine dehydrogenase; ox 42.8 1.5E+02 0.0053 25.2 10.0 106 213-357 10-136 (349)
133 3c75_H MADH, methylamine dehyd 41.9 2.1E+02 0.0072 26.3 12.8 69 265-360 330-407 (426)
134 3s3x_D Psalmotoxin-1; acid-sen 41.6 11 0.00037 20.3 1.1 22 102-126 15-36 (37)
135 3sov_A LRP-6, low-density lipo 41.1 1.8E+02 0.0062 25.3 21.4 145 102-285 43-194 (318)
136 1npe_A Nidogen, entactin; glyc 40.4 1.6E+02 0.0054 24.4 24.1 147 100-282 42-194 (267)
137 2z2n_A Virginiamycin B lyase; 40.2 1.6E+02 0.0054 24.4 22.7 197 100-363 20-220 (299)
138 3ow8_A WD repeat-containing pr 40.2 1.8E+02 0.0061 25.0 21.8 111 232-377 187-300 (321)
139 2ghs_A AGR_C_1268P; regucalcin 39.6 1.9E+02 0.0063 25.0 13.4 47 214-272 61-107 (326)
140 1ijq_A LDL receptor, low-densi 39.5 1.9E+02 0.0064 25.0 18.5 193 107-361 3-201 (316)
141 2oiz_A Aromatic amine dehydrog 39.3 2E+02 0.0069 25.3 14.5 32 331-362 310-341 (361)
142 3p5b_L Low density lipoprotein 39.1 2.2E+02 0.0075 25.7 25.0 215 101-379 119-344 (400)
143 1ddw_A GLGF-domain protein hom 38.9 75 0.0026 23.5 5.9 40 117-162 11-51 (120)
144 3m0c_C LDL receptor, low-densi 38.8 3.2E+02 0.011 27.5 19.5 65 208-285 474-543 (791)
145 4a11_B DNA excision repair pro 38.5 2E+02 0.0068 25.1 17.3 31 328-358 248-279 (408)
146 3lrv_A PRE-mRNA-splicing facto 38.4 1.9E+02 0.0066 24.9 11.8 95 232-357 150-246 (343)
147 2hz6_A Endoplasmic reticulum t 38.2 12 0.00042 33.8 1.8 28 208-243 4-31 (369)
148 3mkq_A Coatomer beta'-subunit; 37.7 3.1E+02 0.01 27.0 22.2 181 116-360 76-264 (814)
149 4h5i_A Guanine nucleotide-exch 37.7 2.1E+02 0.0072 25.1 15.0 50 328-377 272-322 (365)
150 4ggc_A P55CDC, cell division c 37.2 1.8E+02 0.0063 24.2 20.1 148 103-286 34-181 (318)
151 3k26_A Polycomb protein EED; W 36.6 2E+02 0.0068 24.5 18.3 67 266-355 299-366 (366)
152 3bg1_A Protein SEC13 homolog; 36.2 2E+02 0.0069 24.5 10.6 70 265-361 24-96 (316)
153 1n7d_A LDL receptor, low-densi 36.0 2.5E+02 0.0087 27.7 11.2 144 101-279 460-607 (699)
154 1evh_A WH1 domain, protein (ME 36.0 78 0.0027 23.1 5.6 42 117-162 11-52 (112)
155 4gqb_B Methylosome protein 50; 35.5 2.2E+02 0.0077 24.8 17.4 190 104-359 137-335 (344)
156 1n7d_A LDL receptor, low-densi 34.7 2.2E+02 0.0075 28.2 10.4 62 180-249 562-624 (699)
157 1pby_B Quinohemoprotein amine 34.6 2.1E+02 0.0071 24.1 17.9 17 347-363 220-236 (337)
158 3tc9_A Hypothetical hydrolase; 34.6 2.7E+02 0.0092 25.4 15.8 48 213-273 149-198 (430)
159 3vl1_A 26S proteasome regulato 34.3 2.4E+02 0.0083 24.8 17.9 210 101-356 189-420 (420)
160 1kv9_A Type II quinohemoprotei 33.9 3.4E+02 0.012 26.5 14.5 80 208-296 112-195 (668)
161 2xyi_A Probable histone-bindin 33.7 2.6E+02 0.009 25.1 16.7 192 116-359 203-414 (430)
162 2iwa_A Glutamine cyclotransfer 33.3 2.3E+02 0.0077 24.2 20.2 157 105-301 31-190 (266)
163 4a11_B DNA excision repair pro 33.1 2.4E+02 0.0083 24.5 20.3 32 328-359 337-369 (408)
164 2kwv_A RAD30 homolog B, DNA po 32.8 20 0.00067 21.4 1.4 16 2-17 22-37 (48)
165 1sq9_A Antiviral protein SKI8; 32.5 2.5E+02 0.0085 24.4 19.9 33 328-360 236-272 (397)
166 3zwl_B Eukaryotic translation 32.3 2.4E+02 0.008 24.1 22.8 69 265-361 186-255 (369)
167 2pm7_B Protein transport prote 31.8 2.3E+02 0.0078 23.8 13.8 129 213-378 20-156 (297)
168 2xzm_R RACK1; ribosome, transl 31.8 2.5E+02 0.0085 24.2 14.1 72 265-359 38-111 (343)
169 1sq9_A Antiviral protein SKI8; 31.6 2.6E+02 0.0089 24.3 19.3 116 232-357 259-397 (397)
170 3tc9_A Hypothetical hydrolase; 30.5 3.1E+02 0.011 24.9 15.5 151 100-285 143-300 (430)
171 2ghs_A AGR_C_1268P; regucalcin 30.4 2.6E+02 0.0089 24.0 19.6 205 101-363 56-268 (326)
172 1yr2_A Prolyl oligopeptidase; 30.0 4.1E+02 0.014 26.1 21.0 145 179-361 293-447 (741)
173 1qks_A Cytochrome CD1 nitrite 30.0 3.7E+02 0.013 25.7 20.1 196 106-361 167-379 (567)
174 2vdu_B TRNA (guanine-N(7)-)-me 30.0 3.1E+02 0.011 24.7 22.2 195 116-359 170-397 (450)
175 1gxr_A ESG1, transducin-like e 29.3 2.5E+02 0.0086 23.5 23.2 178 116-360 118-301 (337)
176 2qc5_A Streptogramin B lactona 29.1 2.4E+02 0.0083 23.2 22.5 196 100-362 25-224 (300)
177 2p4o_A Hypothetical protein; p 29.0 2.7E+02 0.0091 23.7 21.3 195 105-361 42-247 (306)
178 3sfz_A APAF-1, apoptotic pepti 28.9 5.2E+02 0.018 27.0 23.2 206 103-362 624-835 (1249)
179 4a2l_A BT_4663, two-component 28.7 4.4E+02 0.015 26.1 22.5 34 328-361 359-392 (795)
180 2dk7_A Transcription elongatio 28.3 48 0.0016 22.1 2.9 20 339-358 23-42 (73)
181 1w6s_A Methanol dehydrogenase 27.4 4.3E+02 0.015 25.5 11.1 120 207-360 56-196 (599)
182 2qe8_A Uncharacterized protein 27.2 2.3E+02 0.008 24.5 8.5 74 208-284 70-152 (343)
183 3zwl_B Eukaryotic translation 27.1 2.9E+02 0.0099 23.4 16.1 29 328-356 178-207 (369)
184 1npe_A Nidogen, entactin; glyc 27.0 2.6E+02 0.009 22.9 11.7 60 213-284 47-108 (267)
185 4aow_A Guanine nucleotide-bind 27.0 2.8E+02 0.0096 23.3 19.5 30 328-357 309-339 (340)
186 3hxj_A Pyrrolo-quinoline quino 26.8 2E+02 0.0069 24.3 7.9 23 332-354 301-323 (330)
187 1pby_B Quinohemoprotein amine 26.8 2.8E+02 0.0096 23.2 10.9 50 232-285 12-64 (337)
188 1ugj_A Riken cDNA 2310057J16 p 26.5 1.5E+02 0.0052 22.6 5.8 77 106-197 56-135 (141)
189 4h5i_A Guanine nucleotide-exch 26.2 3.3E+02 0.011 23.8 20.2 195 103-356 142-344 (365)
190 2xzh_A Clathrin heavy chain 1; 26.1 2.4E+02 0.0081 25.3 7.8 34 328-361 262-296 (365)
191 2lyd_A Decapping protein 1; DC 25.7 67 0.0023 24.3 3.8 29 338-366 30-58 (134)
192 1kb0_A Quinohemoprotein alcoho 25.7 4.8E+02 0.016 25.5 13.6 79 208-295 123-206 (677)
193 3frx_A Guanine nucleotide-bind 25.6 3.1E+02 0.011 23.3 12.5 89 265-378 29-118 (319)
194 1i2h_A PSD-ZIP45(homer-1C/VESL 24.9 1.5E+02 0.0051 23.4 5.7 40 117-162 16-56 (168)
195 3v64_C Agrin; beta propeller, 24.8 3.5E+02 0.012 23.7 23.3 140 105-285 44-188 (349)
196 1p22_A F-BOX/WD-repeat protein 23.3 4E+02 0.014 23.7 23.7 176 116-360 152-330 (435)
197 3k26_A Polycomb protein EED; W 22.8 3.5E+02 0.012 22.9 20.3 55 116-190 94-148 (366)
198 1flg_A Protein (quinoprotein e 22.8 5E+02 0.017 24.8 13.2 121 207-360 62-198 (582)
199 1erj_A Transcriptional repress 22.6 3.9E+02 0.013 23.4 20.9 207 103-360 132-346 (393)
200 2ovr_B FBW7, F-BOX/WD repeat p 22.6 4.1E+02 0.014 23.7 23.5 138 180-356 299-443 (445)
201 2vdu_B TRNA (guanine-N(7)-)-me 22.4 4.2E+02 0.014 23.7 22.2 66 266-360 210-276 (450)
202 3v9f_A Two-component system se 22.3 5.7E+02 0.02 25.2 22.6 199 105-361 323-530 (781)
203 3q6k_A 43.2 kDa salivary prote 22.2 3.2E+02 0.011 24.7 8.2 24 230-253 122-148 (381)
204 1yiq_A Quinohemoprotein alcoho 21.9 5.7E+02 0.019 25.0 16.5 80 208-296 116-200 (689)
205 3u4y_A Uncharacterized protein 21.9 3.6E+02 0.012 22.6 13.6 96 231-361 20-123 (331)
206 1egx_A VAsp, vasodilator-stimu 21.1 1.6E+02 0.0054 21.5 4.9 44 117-163 11-54 (115)
207 3nok_A Glutaminyl cyclase; bet 20.9 3.9E+02 0.013 22.8 14.7 141 181-364 76-220 (268)
208 3dm0_A Maltose-binding peripla 20.9 5.7E+02 0.019 24.6 12.6 33 328-360 433-466 (694)
209 2ynn_A Coatomer subunit beta'; 20.6 3.8E+02 0.013 22.5 15.5 126 213-378 24-151 (304)
210 3dr2_A Exported gluconolactona 20.3 3.9E+02 0.013 22.5 19.9 33 331-364 244-276 (305)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.27 E-value=5.9e-09 Score=94.67 Aligned_cols=231 Identities=13% Similarity=0.034 Sum_probs=142.3
Q ss_pred EeecCceEEeeecc---ccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCC
Q 016367 101 VGSCNGLLCVSDAL---YFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWP 177 (390)
Q Consensus 101 ~~s~~GLl~~~~~~---~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 177 (390)
....+|.|.+..+. ....+.++||.|++|..+|+++.....+... .++ + +++.+.... . ...
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~---~--~iyv~GG~~----~----~~~ 115 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC--AAE---G--KIYTSGGSE----V----GNS 115 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE--EET---T--EEEEECCBB----T----TBS
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE--EEC---C--EEEEECCCC----C----CCc
Confidence 33456666555442 2467999999999999998876443333222 222 2 344433211 0 112
Q ss_pred CCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCC--CceEEEEEECCCceeeee-cCCCCCCC
Q 016367 178 RKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPG--PRLRIMSFDLAEEDFGEI-GLPDCGSL 254 (390)
Q Consensus 178 ~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~--~~~~il~fD~~~e~~~~i-~lP~~~~~ 254 (390)
....+++|+..++ +|+.++.+|..... ...+.++|.+|.++........ ....+..||+.+++|+.+ ++|...
T Consensus 116 ~~~~~~~~d~~~~-~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-- 191 (306)
T 3ii7_A 116 ALYLFECYDTRTE-SWHTKPSMLTQRCS-HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR-- 191 (306)
T ss_dssp CCCCEEEEETTTT-EEEEECCCSSCCBS-CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC--
T ss_pred EeeeEEEEeCCCC-ceEeCCCCcCCcce-eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh--
Confidence 3467999999999 99999877755433 5578889999998765411110 023699999999999998 445433
Q ss_pred CCcceEEEEeCCeEEEEEeC-C-CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEE
Q 016367 255 SVCNFHLVVLRGCLSAVHCL-D-DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVC 332 (390)
Q Consensus 255 ~~~~~~L~~~~G~L~~~~~~-~-~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (390)
.....+..+|+|+++... . ...-++|.++-. +..|..+..++. .. . ....+
T Consensus 192 --~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~-------------~r-------~---~~~~~ 244 (306)
T 3ii7_A 192 --KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIK--LNEWKMVSPMPW-------------KG-------V---TVKCA 244 (306)
T ss_dssp --BSCEEEEETTEEEEECCEETTEEBCCEEEEETT--TTEEEECCCCSC-------------CB-------S---CCEEE
T ss_pred --hcceEEEECCEEEEEeCCCCCCCCceEEEeeCC--CCcEEECCCCCC-------------Cc-------c---ceeEE
Confidence 455677889999995432 1 123356776632 568998754333 11 0 11122
Q ss_pred EeeCCceEeeee------CCeEEEEeCCCCcEEEE-EEeCCCCceEEEeeecc
Q 016367 333 DWKNGEILLEYA------NGALVSYNPENEELKDL-VIFDPPKWFCSIVHVES 378 (390)
Q Consensus 333 ~~~~g~il~~~~------~~~l~~yd~~t~~~~~v-~~~~~~~~~~~~~y~~s 378 (390)
+. ++.|++... ...+..||+++++|+++ .+......+.+....+.
T Consensus 245 ~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~ 296 (306)
T 3ii7_A 245 AV-GSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVDT 296 (306)
T ss_dssp EE-TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEEC
T ss_pred EE-CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECCc
Confidence 22 566766643 24699999999999999 44544444555555444
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.21 E-value=3.1e-09 Score=96.38 Aligned_cols=213 Identities=15% Similarity=0.131 Sum_probs=133.8
Q ss_pred eecCceEEeeecc----ccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCC
Q 016367 102 GSCNGLLCVSDAL----YFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWP 177 (390)
Q Consensus 102 ~s~~GLl~~~~~~----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 177 (390)
...+|.|.+..+. ....++++||.|++|..+|+++.....+... .++ + +++.+.... ...
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~---~--~iyv~GG~~---------~~~ 121 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAA--VLN---G--LLYAVGGFD---------GST 121 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EET---T--EEEEEEEEC---------SSC
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEE--EEC---C--EEEEEcCCC---------CCc
Confidence 3446766665442 2357999999999999999876543333221 121 2 344444312 112
Q ss_pred CCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCC
Q 016367 178 RKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSV 256 (390)
Q Consensus 178 ~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~ 256 (390)
....+++|+..++ +|+.++.+|..... ...+.++|.+|.++............+..||+.+++|+.+ ++|...
T Consensus 122 ~~~~~~~~d~~~~-~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---- 195 (302)
T 2xn4_A 122 GLSSVEAYNIKSN-EWFHVAPMNTRRSS-VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR---- 195 (302)
T ss_dssp EEEEEEEEETTTT-EEEEECCCSSCCBS-CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC----
T ss_pred cCceEEEEeCCCC-eEeecCCCCCcccC-ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc----
Confidence 2357999999999 99999877654332 5577889999998765411111123689999999999998 445432
Q ss_pred cceEEEEeCCeEEEEEeCCC--CcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEe
Q 016367 257 CNFHLVVLRGCLSAVHCLDD--KGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDW 334 (390)
Q Consensus 257 ~~~~L~~~~G~L~~~~~~~~--~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
....++..+|+|+++..... ..-++|..+-. +..|..+..++. .. . . .. .++.
T Consensus 196 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~~~-------------~r-------~-~-~~-~~~~ 250 (302)
T 2xn4_A 196 SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPT--TNAWRQVADMNM-------------CR-------R-N-AG-VCAV 250 (302)
T ss_dssp BSCEEEEETTEEEEECCBSSSSBCCCEEEEETT--TTEEEEECCCSS-------------CC-------B-S-CE-EEEE
T ss_pred ccccEEEECCEEEEECCCCCCcccceEEEEeCC--CCCEeeCCCCCC-------------cc-------c-c-Ce-EEEE
Confidence 34567788999999543211 23367777632 568998754333 11 0 1 11 2222
Q ss_pred eCCceEeeee------CCeEEEEeCCCCcEEEEE
Q 016367 335 KNGEILLEYA------NGALVSYNPENEELKDLV 362 (390)
Q Consensus 335 ~~g~il~~~~------~~~l~~yd~~t~~~~~v~ 362 (390)
++.|++... ...+..||+++++|+.+.
T Consensus 251 -~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 251 -NGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp -TTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred -CCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 566766643 134999999999999983
No 3
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.21 E-value=6.5e-09 Score=94.12 Aligned_cols=211 Identities=12% Similarity=0.069 Sum_probs=132.6
Q ss_pred EeecCceEEeeecc----ccccEEEEcCCCcc---eecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccC
Q 016367 101 VGSCNGLLCVSDAL----YFNPIIVCNPFTGS---YLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRD 173 (390)
Q Consensus 101 ~~s~~GLl~~~~~~----~~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~ 173 (390)
....+|.|.+..+. ....++++||.|++ |..+|+++......... .++ + +++.+....
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~--~~~----~-~lyv~GG~~-------- 122 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT--TLG----D-MIYVSGGFD-------- 122 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE--EET----T-EEEEECCBC--------
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE--EEC----C-EEEEEcccC--------
Confidence 33456666555432 24579999999999 99998875443332221 122 2 344443211
Q ss_pred CCCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCC
Q 016367 174 RGWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCG 252 (390)
Q Consensus 174 ~~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~ 252 (390)
+......+++|+..++ +|+.++.+|..... ...+.++|.+|.++...... ....+..||+.+++|+.+ ++|...
T Consensus 123 -~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r 197 (301)
T 2vpj_A 123 -GSRRHTSMERYDPNID-QWSMLGDMQTAREG-AGLVVASGVIYCLGGYDGLN--ILNSVEKYDPHTGHWTNVTPMATKR 197 (301)
T ss_dssp -SSCBCCEEEEEETTTT-EEEEEEECSSCCBS-CEEEEETTEEEEECCBCSSC--BCCCEEEEETTTTEEEEECCCSSCC
T ss_pred -CCcccceEEEEcCCCC-eEEECCCCCCCccc-ceEEEECCEEEEECCCCCCc--ccceEEEEeCCCCcEEeCCCCCccc
Confidence 1122457999999999 99998877644332 55778899999887643111 123799999999999998 444433
Q ss_pred CCCCcceEEEEeCCeEEEEEeCC--CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEE
Q 016367 253 SLSVCNFHLVVLRGCLSAVHCLD--DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQV 330 (390)
Q Consensus 253 ~~~~~~~~L~~~~G~L~~~~~~~--~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (390)
.....+..+|+|+++.... ...-++|.++-. +.+|..+..++. .. . ...
T Consensus 198 ----~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~-------------~r---------~-~~~ 248 (301)
T 2vpj_A 198 ----SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIR--TDSWTTVTSMTT-------------PR---------C-YVG 248 (301)
T ss_dssp ----BSCEEEEETTEEEEECCBCSSSBCCCEEEEETT--TTEEEEECCCSS-------------CC---------B-SCE
T ss_pred ----ccceEEEECCEEEEEeCCCCCcccceEEEEeCC--CCcEEECCCCCC-------------cc---------c-cee
Confidence 3556778899999954431 213456666632 568998754333 11 0 111
Q ss_pred EEEeeCCceEeeeeC------CeEEEEeCCCCcEEEE
Q 016367 331 VCDWKNGEILLEYAN------GALVSYNPENEELKDL 361 (390)
Q Consensus 331 ~~~~~~g~il~~~~~------~~l~~yd~~t~~~~~v 361 (390)
.++. ++.|++.... ..+..||+++++|+.+
T Consensus 249 ~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 249 ATVL-RGRLYAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp EEEE-TTEEEEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred EEEE-CCEEEEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 2233 5667666431 3589999999999998
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.20 E-value=1e-08 Score=93.27 Aligned_cols=211 Identities=16% Similarity=0.133 Sum_probs=132.7
Q ss_pred eecCceEEeeecc--------ccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccC
Q 016367 102 GSCNGLLCVSDAL--------YFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRD 173 (390)
Q Consensus 102 ~s~~GLl~~~~~~--------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~ 173 (390)
...+|.|.+..+. ....++++||.|++|..+|+++......... .++ + +++.+....
T Consensus 67 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~---~--~iyv~GG~~-------- 131 (308)
T 1zgk_A 67 CVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG--VID---G--HIYAVGGSH-------- 131 (308)
T ss_dssp EEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE--EET---T--EEEEECCEE--------
T ss_pred EEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEE--EEC---C--EEEEEcCCC--------
Confidence 3446666555432 1357999999999999999875543332221 122 2 344443211
Q ss_pred CCCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCC
Q 016367 174 RGWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCG 252 (390)
Q Consensus 174 ~~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~ 252 (390)
.......+++|+..++ +|+.++.+|..... ...+.++|.+|.++....... ...+..||+.+++|+.+ ++|...
T Consensus 132 -~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~--~~~~~~yd~~~~~W~~~~~~p~~r 206 (308)
T 1zgk_A 132 -GCIHHNSVERYEPERD-EWHLVAPMLTRRIG-VGVAVLNRLLYAVGGFDGTNR--LNSAECYYPERNEWRMITAMNTIR 206 (308)
T ss_dssp -TTEECCCEEEEETTTT-EEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSCB--CCCEEEEETTTTEEEECCCCSSCC
T ss_pred -CCcccccEEEECCCCC-eEeECCCCCccccc-eEEEEECCEEEEEeCCCCCCc--CceEEEEeCCCCeEeeCCCCCCcc
Confidence 1112357999999999 99999877654433 557788999999876531111 23799999999999988 444432
Q ss_pred CCCCcceEEEEeCCeEEEEEeCC--CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEE
Q 016367 253 SLSVCNFHLVVLRGCLSAVHCLD--DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQV 330 (390)
Q Consensus 253 ~~~~~~~~L~~~~G~L~~~~~~~--~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (390)
.....+..+|+|+++.... ...-++|+++-. +..|+++..++. .. . . ..
T Consensus 207 ----~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~p~-------------~r-------~-~-~~- 257 (308)
T 1zgk_A 207 ----SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVE--TETWTFVAPMKH-------------RR-------S-A-LG- 257 (308)
T ss_dssp ----BSCEEEEETTEEEEECCBCSSSBCCCEEEEETT--TTEEEECCCCSS-------------CC-------B-S-CE-
T ss_pred ----ccceEEEECCEEEEEeCCCCCCccceEEEEeCC--CCcEEECCCCCC-------------Cc-------c-c-eE-
Confidence 3456677899999955321 224567777632 568998654332 11 0 0 11
Q ss_pred EEEeeCCceEeeee------CCeEEEEeCCCCcEEEEE
Q 016367 331 VCDWKNGEILLEYA------NGALVSYNPENEELKDLV 362 (390)
Q Consensus 331 ~~~~~~g~il~~~~------~~~l~~yd~~t~~~~~v~ 362 (390)
.++. ++.|++... ...+..||+++++|+++.
T Consensus 258 ~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 294 (308)
T 1zgk_A 258 ITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVT 294 (308)
T ss_dssp EEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE
T ss_pred EEEE-CCEEEEEcCcCCCcccceEEEEcCCCCEEeecC
Confidence 2222 566766642 245999999999999983
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.17 E-value=2.1e-08 Score=91.64 Aligned_cols=215 Identities=8% Similarity=0.057 Sum_probs=132.1
Q ss_pred EEeecCceEEeeecc-----c-----cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccc
Q 016367 100 VVGSCNGLLCVSDAL-----Y-----FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYR 169 (390)
Q Consensus 100 ~~~s~~GLl~~~~~~-----~-----~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~ 169 (390)
.+...+|.|.+..+. . ...++++||.|++|..+|+++.....+... .++ + ++..+....
T Consensus 51 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~---~--~iyv~GG~~---- 119 (318)
T 2woz_A 51 SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLG--EVD---D--KIYVVAGKD---- 119 (318)
T ss_dssp EEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEE--EET---T--EEEEEEEEB----
T ss_pred EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceE--EEC---C--EEEEEcCcc----
Confidence 445566766665541 0 113889999999999998876543332211 121 2 344443311
Q ss_pred cccCCCCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cC
Q 016367 170 SLRDRGWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GL 248 (390)
Q Consensus 170 ~~~~~~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~l 248 (390)
.. +......+++|+..++ +|+.++.+|..... ...+..+|.+|.++... ........+..||+.+++|+.+ ++
T Consensus 120 ~~---~~~~~~~~~~yd~~~~-~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~-~~~~~~~~~~~yd~~~~~W~~~~~~ 193 (318)
T 2woz_A 120 LQ---TEASLDSVLCYDPVAA-KWSEVKNLPIKVYG-HNVISHNGMIYCLGGKT-DDKKCTNRVFIYNPKKGDWKDLAPM 193 (318)
T ss_dssp TT---TCCEEEEEEEEETTTT-EEEEECCCSSCEES-CEEEEETTEEEEECCEE-SSSCBCCCEEEEETTTTEEEEECCC
T ss_pred CC---CCcccceEEEEeCCCC-CEeECCCCCCcccc-cEEEEECCEEEEEcCCC-CCCCccceEEEEcCCCCEEEECCCC
Confidence 00 1122357999999999 99999877755433 55778999999987653 1111123699999999999998 44
Q ss_pred CCCCCCCCcceEEEEeCCeEEEEEe-CC-CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCc
Q 016367 249 PDCGSLSVCNFHLVVLRGCLSAVHC-LD-DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRG 326 (390)
Q Consensus 249 P~~~~~~~~~~~L~~~~G~L~~~~~-~~-~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (390)
|... .....++.+|+|+++.. .. ...-++|+.+-. +..|+++..++. .. .
T Consensus 194 p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~-------------~r---------~ 245 (318)
T 2woz_A 194 KTPR----SMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLK--TNKWEVMTEFPQ-------------ER---------S 245 (318)
T ss_dssp SSCC----BSCEEEEETTEEEEEEEEETTEEEEEEEEEETT--TCCEEECCCCSS-------------CC---------B
T ss_pred CCCc----ccceEEEECCEEEEEcCcCCCCccceEEEEECC--CCeEEECCCCCC-------------cc---------c
Confidence 4332 34566788999999443 21 223467777632 568998754433 11 0
Q ss_pred ceEEEEEeeCCceEeeee---------------CCeEEEEeCCCCcEEEE
Q 016367 327 SSQVVCDWKNGEILLEYA---------------NGALVSYNPENEELKDL 361 (390)
Q Consensus 327 ~~~~~~~~~~g~il~~~~---------------~~~l~~yd~~t~~~~~v 361 (390)
...+++. ++.|++... ...+..||+++++|+++
T Consensus 246 -~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 246 -SISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp -SCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred -ceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 1112222 455665421 24599999999999998
No 6
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.16 E-value=4.6e-08 Score=89.16 Aligned_cols=216 Identities=10% Similarity=0.034 Sum_probs=133.3
Q ss_pred EEeecCceEEeeecc----------ccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccc
Q 016367 100 VVGSCNGLLCVSDAL----------YFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYR 169 (390)
Q Consensus 100 ~~~s~~GLl~~~~~~----------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~ 169 (390)
.....+|.|.+..+. ....++++||.|++|..+|+++.....+. .+.. .+ ++..+....
T Consensus 40 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~---~~~~--~~--~lyv~GG~~---- 108 (315)
T 4asc_A 40 SLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG---LGEA--LN--SIYVVGGRE---- 108 (315)
T ss_dssp EEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE---EEEE--TT--EEEEECCEE----
T ss_pred EEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee---EEEE--CC--EEEEEeCCc----
Confidence 344556666555431 12248999999999999988764332222 1111 12 344433211
Q ss_pred cccCCCCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cC
Q 016367 170 SLRDRGWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GL 248 (390)
Q Consensus 170 ~~~~~~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~l 248 (390)
. ..+......+++|+..++ +|+.++.+|..... ..++.++|.+|.++... ........+..||+.+++|+.+ ++
T Consensus 109 ~--~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~-~~~~~~~~~~~yd~~~~~W~~~~~~ 183 (315)
T 4asc_A 109 I--KDGERCLDSVMCYDRLSF-KWGESDPLPYVVYG-HTVLSHMDLVYVIGGKG-SDRKCLNKMCVYDPKKFEWKELAPM 183 (315)
T ss_dssp S--STTCCBCCCEEEEETTTT-EEEECCCCSSCCBS-CEEEEETTEEEEECCBC-TTSCBCCCEEEEETTTTEEEECCCC
T ss_pred C--CCCCcccceEEEECCCCC-cEeECCCCCCcccc-eeEEEECCEEEEEeCCC-CCCcccceEEEEeCCCCeEEECCCC
Confidence 0 001233468999999999 99999887765433 56788999999987652 1111224799999999999998 45
Q ss_pred CCCCCCCCcceEEEEeCCeEEEEEe-CC-CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCc
Q 016367 249 PDCGSLSVCNFHLVVLRGCLSAVHC-LD-DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRG 326 (390)
Q Consensus 249 P~~~~~~~~~~~L~~~~G~L~~~~~-~~-~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (390)
|... .....++.+|+|+++.. .. ...-++|+.+-. +..|+.+..++. .. .
T Consensus 184 p~~r----~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--~~~W~~~~~~p~-------------~r---------~ 235 (315)
T 4asc_A 184 QTAR----SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSIT--DNKWAPFEAFPQ-------------ER---------S 235 (315)
T ss_dssp SSCC----BSCEEEEETTEEEEEEEECSSSEEEEEEEEETT--TTEEEEECCCSS-------------CC---------B
T ss_pred CCch----hceEEEEECCEEEEEeccCCCCccceEEEEECC--CCeEEECCCCCC-------------cc---------c
Confidence 5432 45567788999999443 31 223467777632 568998754332 11 0
Q ss_pred ceEEEEEeeCCceEeeee---------------CCeEEEEeCCCCcEEEE
Q 016367 327 SSQVVCDWKNGEILLEYA---------------NGALVSYNPENEELKDL 361 (390)
Q Consensus 327 ~~~~~~~~~~g~il~~~~---------------~~~l~~yd~~t~~~~~v 361 (390)
....++. ++.|++... ...+..||+++++|+++
T Consensus 236 -~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 283 (315)
T 4asc_A 236 -SLSLVSL-VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV 283 (315)
T ss_dssp -SCEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE
T ss_pred -ceeEEEE-CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh
Confidence 1111222 455655432 13489999999999999
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.09 E-value=2.7e-08 Score=89.97 Aligned_cols=214 Identities=15% Similarity=0.135 Sum_probs=131.5
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCc---
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHT--- 192 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~--- 192 (390)
...++++||.|++|..+|+++.....+.. ...+ + +++.+.... +......+++|+..++ +
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~--~~~~---~--~l~v~GG~~---------~~~~~~~~~~~d~~~~-~~~~ 92 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVAS--VSLH---D--RIYVIGGYD---------GRSRLSSVECLDYTAD-EDGV 92 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEE--EEET---T--EEEEECCBC---------SSCBCCCEEEEETTCC-TTCC
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccE--EEEC---C--EEEEEcCCC---------CCccCceEEEEECCCC-CCCe
Confidence 45799999999999999976543322221 1122 2 344443211 1122457999999999 9
Q ss_pred ccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeCCeEEEE
Q 016367 193 WRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAV 271 (390)
Q Consensus 193 W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~ 271 (390)
|+.+..+|..... ...+.++|.+|.++...... ....+..||+.+++|+.+ ++|... .....+..+|+|+++
T Consensus 93 W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~--~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~ 165 (301)
T 2vpj_A 93 WYSVAPMNVRRGL-AGATTLGDMIYVSGGFDGSR--RHTSMERYDPNIDQWSMLGDMQTAR----EGAGLVVASGVIYCL 165 (301)
T ss_dssp CEEECCCSSCCBS-CEEEEETTEEEEECCBCSSC--BCCEEEEEETTTTEEEEEEECSSCC----BSCEEEEETTEEEEE
T ss_pred eEECCCCCCCccc-eeEEEECCEEEEEcccCCCc--ccceEEEEcCCCCeEEECCCCCCCc----ccceEEEECCEEEEE
Confidence 9999877654433 56778899999987654111 123799999999999988 555433 345667789999995
Q ss_pred EeCC--CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-----
Q 016367 272 HCLD--DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA----- 344 (390)
Q Consensus 272 ~~~~--~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~----- 344 (390)
.... ...-++|+++-. +..|+++..++. .. . .....+. ++.|++...
T Consensus 166 GG~~~~~~~~~~~~~d~~--~~~W~~~~~~p~-------------~r-------~---~~~~~~~-~~~i~v~GG~~~~~ 219 (301)
T 2vpj_A 166 GGYDGLNILNSVEKYDPH--TGHWTNVTPMAT-------------KR-------S---GAGVALL-NDHIYVVGGFDGTA 219 (301)
T ss_dssp CCBCSSCBCCCEEEEETT--TTEEEEECCCSS-------------CC-------B---SCEEEEE-TTEEEEECCBCSSS
T ss_pred CCCCCCcccceEEEEeCC--CCcEEeCCCCCc-------------cc-------c---cceEEEE-CCEEEEEeCCCCCc
Confidence 4321 223456776632 568998743332 11 0 1111222 556666642
Q ss_pred -CCeEEEEeCCCCcEEEEE-EeCCCCceEEEeeeccc
Q 016367 345 -NGALVSYNPENEELKDLV-IFDPPKWFCSIVHVESL 379 (390)
Q Consensus 345 -~~~l~~yd~~t~~~~~v~-~~~~~~~~~~~~y~~sL 379 (390)
...+..||+++++|+++. +......+.+..+...|
T Consensus 220 ~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 256 (301)
T 2vpj_A 220 HLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRL 256 (301)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred ccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEE
Confidence 245999999999999983 22222334444443333
No 8
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.07 E-value=7.2e-11 Score=77.25 Aligned_cols=42 Identities=33% Similarity=0.564 Sum_probs=38.5
Q ss_pred CCCCcHHHHHHHHccCCccchhhhhhhhHhhhhhhcCCChhh
Q 016367 1 MENLPLDVALDILSRLPITALVRTKCVCRTWQALAQDPRLPI 42 (390)
Q Consensus 1 i~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~ 42 (390)
++.||+|++.+||++||++++.++++|||+|+.++.++.|-+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 468999999999999999999999999999999999887653
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.03 E-value=4.8e-08 Score=88.44 Aligned_cols=197 Identities=13% Similarity=0.065 Sum_probs=124.6
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+.++||.+++|..+++++.....+.. ..++ + +++.+.... .......+++|+..++ +|+.
T Consensus 29 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~--~~~~----~-~lyv~GG~~---------~~~~~~~~~~~d~~~~-~W~~ 91 (302)
T 2xn4_A 29 IRSVECYDFKEERWHQVAELPSRRCRAGM--VYMA----G-LVFAVGGFN---------GSLRVRTVDSYDPVKD-QWTS 91 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEE--EEET----T-EEEEESCBC---------SSSBCCCEEEEETTTT-EEEE
T ss_pred CCcEEEEcCcCCcEeEcccCCcccccceE--EEEC----C-EEEEEeCcC---------CCccccceEEECCCCC-ceee
Confidence 35789999999999999877543322221 1111 2 344433211 1122357999999999 9999
Q ss_pred cCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeCCeEEEEEeC
Q 016367 196 LGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAVHCL 274 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~~~~ 274 (390)
++.+|..... ...+.++|.+|.++.... ......+..||+.+++|+.+ ++|... .....+..+|+|+++...
T Consensus 92 ~~~~p~~r~~-~~~~~~~~~iyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~ 164 (302)
T 2xn4_A 92 VANMRDRRST-LGAAVLNGLLYAVGGFDG--STGLSSVEAYNIKSNEWFHVAPMNTRR----SSVGVGVVGGLLYAVGGY 164 (302)
T ss_dssp ECCCSSCCBS-CEEEEETTEEEEEEEECS--SCEEEEEEEEETTTTEEEEECCCSSCC----BSCEEEEETTEEEEECCE
T ss_pred CCCCCccccc-eEEEEECCEEEEEcCCCC--CccCceEEEEeCCCCeEeecCCCCCcc----cCceEEEECCEEEEEeCC
Confidence 9887754433 567788999999876541 11124789999999999998 444432 345667789999994332
Q ss_pred -CCC---cEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------
Q 016367 275 -DDK---GMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------ 344 (390)
Q Consensus 275 -~~~---~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------ 344 (390)
... .-++|..+-. +..|+++..++. .. . ....++. ++.|++...
T Consensus 165 ~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~-------------~r-------~---~~~~~~~-~~~iyv~GG~~~~~~ 218 (302)
T 2xn4_A 165 DVASRQCLSTVECYNAT--TNEWTYIAEMST-------------RR-------S---GAGVGVL-NNLLYAVGGHDGPLV 218 (302)
T ss_dssp ETTTTEECCCEEEEETT--TTEEEEECCCSS-------------CC-------B---SCEEEEE-TTEEEEECCBSSSSB
T ss_pred CCCCCccccEEEEEeCC--CCcEEECCCCcc-------------cc-------c---cccEEEE-CCEEEEECCCCCCcc
Confidence 111 2356776632 568998754332 11 0 1112222 556666642
Q ss_pred CCeEEEEeCCCCcEEEEE
Q 016367 345 NGALVSYNPENEELKDLV 362 (390)
Q Consensus 345 ~~~l~~yd~~t~~~~~v~ 362 (390)
...+..||+++++|+++.
T Consensus 219 ~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 219 RKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp CCCEEEEETTTTEEEEEC
T ss_pred cceEEEEeCCCCCEeeCC
Confidence 235999999999999984
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.02 E-value=5.7e-08 Score=88.10 Aligned_cols=196 Identities=11% Similarity=0.034 Sum_probs=125.1
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+.++||.|++|..+++++.....+... .++ + +++.+.... ......+++|+..++ +|+.
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~----~-~lyv~GG~~----------~~~~~~~~~~d~~~~-~W~~ 84 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACV--FWD----N-VVYILGGSQ----------LFPIKRMDCYNVVKD-SWYS 84 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEE--EET----T-EEEEECCBS----------SSBCCEEEEEETTTT-EEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEE--EEC----C-EEEEEeCCC----------CCCcceEEEEeCCCC-eEEE
Confidence 367999999999999998875543332221 121 2 243333200 122468999999999 9999
Q ss_pred cCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeCCeEEEEEe-
Q 016367 196 LGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAVHC- 273 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~~~- 273 (390)
+..+|..... ...+.++|.+|.++... ........+..||+.+++|+.+ ++|... .....+..+|+|+++..
T Consensus 85 ~~~~p~~r~~-~~~~~~~~~iyv~GG~~-~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 85 KLGPPTPRDS-LAACAAEGKIYTSGGSE-VGNSALYLFECYDTRTESWHTKPSMLTQR----CSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp EECCSSCCBS-CEEEEETTEEEEECCBB-TTBSCCCCEEEEETTTTEEEEECCCSSCC----BSCEEEEETTEEEEECCE
T ss_pred CCCCCccccc-eeEEEECCEEEEECCCC-CCCcEeeeEEEEeCCCCceEeCCCCcCCc----ceeEEEEECCEEEEECCC
Confidence 9877654433 55778899999887653 1111224799999999999998 455433 34566778999999432
Q ss_pred CC-CC----cEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee----
Q 016367 274 LD-DK----GMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA---- 344 (390)
Q Consensus 274 ~~-~~----~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~---- 344 (390)
.. .. .-++|..+-. +..|+++..++. .. . .....+. ++.|++...
T Consensus 159 ~~~~~~~~~~~~~~~yd~~--~~~W~~~~~~p~-------------~r-------~---~~~~~~~-~~~i~v~GG~~~~ 212 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPA--TETWTELCPMIE-------------AR-------K---NHGLVFV-KDKIFAVGGQNGL 212 (306)
T ss_dssp ESCTTTCEECCCEEEEETT--TTEEEEECCCSS-------------CC-------B---SCEEEEE-TTEEEEECCEETT
T ss_pred CCCCCcccccceEEEeCCC--CCeEEECCCccc-------------hh-------h---cceEEEE-CCEEEEEeCCCCC
Confidence 21 22 4567777632 568998754332 11 0 1112222 556666532
Q ss_pred --CCeEEEEeCCCCcEEEE
Q 016367 345 --NGALVSYNPENEELKDL 361 (390)
Q Consensus 345 --~~~l~~yd~~t~~~~~v 361 (390)
...+..||+++++|+++
T Consensus 213 ~~~~~~~~yd~~~~~W~~~ 231 (306)
T 3ii7_A 213 GGLDNVEYYDIKLNEWKMV 231 (306)
T ss_dssp EEBCCEEEEETTTTEEEEC
T ss_pred CCCceEEEeeCCCCcEEEC
Confidence 24599999999999998
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.00 E-value=2.6e-08 Score=90.52 Aligned_cols=201 Identities=14% Similarity=0.113 Sum_probs=123.9
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+.++||.|++|..+|+++....... .... .+ +++.+..... . .. .......+++|+..++ +|+.
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~---~~~~--~~--~lyv~GG~~~-~-~~---~~~~~~~~~~~d~~~~-~W~~ 104 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLA---GCVV--GG--LLYAVGGRNN-S-PD---GNTDSSALDCYNPMTN-QWSP 104 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCE---EEEE--TT--EEEEECCEEE-E-TT---EEEECCCEEEEETTTT-EEEE
T ss_pred cceEEEEcCCCCeEeECCCCCcccccce---EEEE--CC--EEEEECCCcC-C-CC---CCeecceEEEECCCCC-eEeE
Confidence 4679999999999999987754333222 1111 12 2333322100 0 00 0112357999999999 9999
Q ss_pred cCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeCCeEEEEEeC
Q 016367 196 LGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAVHCL 274 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~~~~ 274 (390)
++.+|..... ...+.++|.+|.++...... ....+..||+.+++|+.+ ++|... .....+..+|+|+++...
T Consensus 105 ~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~ 177 (308)
T 1zgk_A 105 CAPMSVPRNR-IGVGVIDGHIYAVGGSHGCI--HHNSVERYEPERDEWHLVAPMLTRR----IGVGVAVLNRLLYAVGGF 177 (308)
T ss_dssp CCCCSSCCBT-CEEEEETTEEEEECCEETTE--ECCCEEEEETTTTEEEECCCCSSCC----BSCEEEEETTEEEEECCB
T ss_pred CCCCCcCccc-cEEEEECCEEEEEcCCCCCc--ccccEEEECCCCCeEeECCCCCccc----cceEEEEECCEEEEEeCC
Confidence 9877654433 55778899999987643111 113689999999999998 555433 345667779999995432
Q ss_pred C--CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------CC
Q 016367 275 D--DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------NG 346 (390)
Q Consensus 275 ~--~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~ 346 (390)
. ...-++|.++-. +..|+++..++. .. . ....++. ++.|++... ..
T Consensus 178 ~~~~~~~~~~~yd~~--~~~W~~~~~~p~-------------~r-------~---~~~~~~~-~~~iyv~GG~~~~~~~~ 231 (308)
T 1zgk_A 178 DGTNRLNSAECYYPE--RNEWRMITAMNT-------------IR-------S---GAGVCVL-HNCIYAAGGYDGQDQLN 231 (308)
T ss_dssp CSSCBCCCEEEEETT--TTEEEECCCCSS-------------CC-------B---SCEEEEE-TTEEEEECCBCSSSBCC
T ss_pred CCCCcCceEEEEeCC--CCeEeeCCCCCC-------------cc-------c---cceEEEE-CCEEEEEeCCCCCCccc
Confidence 1 223456666632 568997644332 11 0 1112222 566766642 24
Q ss_pred eEEEEeCCCCcEEEEE
Q 016367 347 ALVSYNPENEELKDLV 362 (390)
Q Consensus 347 ~l~~yd~~t~~~~~v~ 362 (390)
.+..||+++++|+++.
T Consensus 232 ~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 232 SVERYDVETETWTFVA 247 (308)
T ss_dssp CEEEEETTTTEEEECC
T ss_pred eEEEEeCCCCcEEECC
Confidence 5999999999999983
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.00 E-value=3.7e-08 Score=91.45 Aligned_cols=241 Identities=10% Similarity=-0.062 Sum_probs=134.0
Q ss_pred eecCceEEeeeccccccEEEEcCCC--cceecccCcc-CCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCC
Q 016367 102 GSCNGLLCVSDALYFNPIIVCNPFT--GSYLELAKAT-QHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPR 178 (390)
Q Consensus 102 ~s~~GLl~~~~~~~~~~~~V~NP~T--~~~~~LP~~~-~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 178 (390)
+..+|.|.+..+.....++++||.+ ++|..+|+++ ..+..+.. ..++ + ++..+.... .........
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~--~~~~---~--~lyv~GG~~----~~~~~~~~~ 84 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATS--AFID---G--NLYVFGGIG----KNSEGLTQV 84 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEE--EEET---T--EEEEECCEE----ECTTSCEEE
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceE--EEEC---C--EEEEEcCCC----CCCCcccee
Confidence 3447777666654456899999984 9999998876 33322221 1222 2 344333210 000000112
Q ss_pred CCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCC--------------------------------
Q 016367 179 KSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNN-------------------------------- 226 (390)
Q Consensus 179 ~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~-------------------------------- 226 (390)
...+++|+..++ +|+.+..++........++..+|.+|.++......
T Consensus 85 ~~~v~~yd~~~~-~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (357)
T 2uvk_A 85 FNDVHKYNPKTN-SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAED 163 (357)
T ss_dssp CCCEEEEETTTT-EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGG
T ss_pred eccEEEEeCCCC-cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccc
Confidence 357999999999 99999877622222244577999999987643100
Q ss_pred CCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeCCeEEEEEeC---CCCcEEEEEEeeCCCCCceEEEEEEccC
Q 016367 227 PGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAVHCL---DDKGMEIWIMKEYKVRESWSKDYIIGTY 302 (390)
Q Consensus 227 ~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~~~~---~~~~~~IW~l~~~~~~~~W~~~~~i~~~ 302 (390)
......+..||+.+++|+.+ ++|.... ....++..+|+|+++... ....-++|.++-+..+..|+++..++.
T Consensus 164 ~~~~~~v~~yd~~~~~W~~~~~~p~~~~---~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~- 239 (357)
T 2uvk_A 164 YFFNKFLLSFDPSTQQWSYAGESPWYGT---AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSS- 239 (357)
T ss_dssp GCCCCEEEEEETTTTEEEEEEECSSCCC---BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSST-
T ss_pred cCCcccEEEEeCCCCcEEECCCCCCCCc---ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCC-
Confidence 00113899999999999988 5554321 235777889999995331 112446777752222568998754432
Q ss_pred CCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeeeC-----------------------CeEEEEeCCCCcEE
Q 016367 303 LPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYAN-----------------------GALVSYNPENEELK 359 (390)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~-----------------------~~l~~yd~~t~~~~ 359 (390)
.. ... .....+ -++.|++.... ..+..||+++++|+
T Consensus 240 ------------~~-------~~~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~ 298 (357)
T 2uvk_A 240 ------------PD-------GVA-GGFAGI-SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWD 298 (357)
T ss_dssp ------------TT-------CCB-SCEEEE-ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CE
T ss_pred ------------Cc-------ccc-cceEEE-ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCcee
Confidence 11 001 111222 35566665421 24789999999999
Q ss_pred EEE-EeCCCCceEEEeeeccc
Q 016367 360 DLV-IFDPPKWFCSIVHVESL 379 (390)
Q Consensus 360 ~v~-~~~~~~~~~~~~y~~sL 379 (390)
++. +......+.+..+...+
T Consensus 299 ~~~~~p~~r~~~~~~~~~~~i 319 (357)
T 2uvk_A 299 KSGELSQGRAYGVSLPWNNSL 319 (357)
T ss_dssp EEEECSSCCBSSEEEEETTEE
T ss_pred eCCCCCCCcccceeEEeCCEE
Confidence 994 33333334444443333
No 13
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.00 E-value=9.4e-11 Score=104.19 Aligned_cols=48 Identities=29% Similarity=0.561 Sum_probs=45.5
Q ss_pred CCCCcHHHHHHHHccCCccchh-hhhhhhHhhhhhhcCCChhhhhhhcC
Q 016367 1 MENLPLDVALDILSRLPITALV-RTKCVCRTWQALAQDPRLPIIYHARA 48 (390)
Q Consensus 1 i~~LP~Dll~eIL~rLP~ksl~-r~r~VcK~W~~li~~~~F~~~~~~~~ 48 (390)
|+.||+||+.+||+|||+++|+ ||++|||+|+++++++.|.+.|+.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 5689999999999999999999 99999999999999999999988775
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.94 E-value=2.1e-07 Score=84.83 Aligned_cols=222 Identities=12% Similarity=0.116 Sum_probs=127.2
Q ss_pred cEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccccC
Q 016367 118 PIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRYLG 197 (390)
Q Consensus 118 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~~~ 197 (390)
.+.++||.|++|...|.+...++.. .+.+. ..+. ++.+.... +...+. .......+++|+..++ +|+.++
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~--~~~~~--~~~~--lyv~GG~~--~~~~~~-~~~~~~~~~~~d~~~~-~W~~~~ 94 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNH--SSIVT--QQNQ--VYVVGGLY--VDEENK-DQPLQSYFFQLDNVSS-EWVGLP 94 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSE--EEEEC--SSSC--EEEEESSC--C--------CCCBEEEEEETTTT-EEEECS
T ss_pred ceEEECCCCCceecccCCccCCccc--eEEEE--ECCE--EEEECCcc--cCcccc-CCCccccEEEEeCCCC-cEEECC
Confidence 4789999999999854332222221 12221 1222 33333200 000000 0011234899999999 999998
Q ss_pred CCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeCCeEEEEEeC--
Q 016367 198 PVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAVHCL-- 274 (390)
Q Consensus 198 ~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~~~~-- 274 (390)
.+|..... ...+.++|.+|.++............+..||+.+.+|+.+ ++|... .....+..+|+|+++...
T Consensus 95 ~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~~~ 169 (318)
T 2woz_A 95 PLPSARCL-FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV----YGHNVISHNGMIYCLGGKTD 169 (318)
T ss_dssp CBSSCBCS-CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE----ESCEEEEETTEEEEECCEES
T ss_pred CCCccccc-cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc----cccEEEEECCEEEEEcCCCC
Confidence 77765433 5677889999999875411122224789999999999998 555443 345566789999994431
Q ss_pred -CCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------CCe
Q 016367 275 -DDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------NGA 347 (390)
Q Consensus 275 -~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~ 347 (390)
....-++|.++-. +.+|+++..++. .. . ....++. ++.|++... ...
T Consensus 170 ~~~~~~~~~~yd~~--~~~W~~~~~~p~-------------~r-------~---~~~~~~~-~~~iyv~GG~~~~~~~~~ 223 (318)
T 2woz_A 170 DKKCTNRVFIYNPK--KGDWKDLAPMKT-------------PR-------S---MFGVAIH-KGKIVIAGGVTEDGLSAS 223 (318)
T ss_dssp SSCBCCCEEEEETT--TTEEEEECCCSS-------------CC-------B---SCEEEEE-TTEEEEEEEEETTEEEEE
T ss_pred CCCccceEEEEcCC--CCEEEECCCCCC-------------Cc-------c---cceEEEE-CCEEEEEcCcCCCCccce
Confidence 1223457777632 568998754332 11 0 1112222 556666642 135
Q ss_pred EEEEeCCCCcEEEEE-EeCCCCceEEEeeecccc
Q 016367 348 LVSYNPENEELKDLV-IFDPPKWFCSIVHVESLF 380 (390)
Q Consensus 348 l~~yd~~t~~~~~v~-~~~~~~~~~~~~y~~sL~ 380 (390)
+..||+++++|+++. +......+.+..+...|+
T Consensus 224 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~ 257 (318)
T 2woz_A 224 VEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLY 257 (318)
T ss_dssp EEEEETTTCCEEECCCCSSCCBSCEEEEETTEEE
T ss_pred EEEEECCCCeEEECCCCCCcccceEEEEECCEEE
Confidence 889999999999983 332333344444444433
No 15
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.85 E-value=3.7e-07 Score=83.12 Aligned_cols=222 Identities=11% Similarity=0.053 Sum_probs=127.0
Q ss_pred ccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCccccc
Q 016367 117 NPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRYL 196 (390)
Q Consensus 117 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~~ 196 (390)
..+.++||.|++|...+.+...++. ..+... ..+. ++.+.... . ............+++|+..++ +|+.+
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~--~~~~~~--~~~~--iyv~GG~~--~-~~~~~~~~~~~~~~~~d~~~~-~W~~~ 82 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKN--HVSLVT--KENQ--VFVAGGLF--Y-NEDNKEDPMSAYFLQFDHLDS-EWLGM 82 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSS--EEEEEC--TTCC--EEEEEEEE--E-CSSCSSSCEEEEEEEEETTTT-EEEEC
T ss_pred CceEEECCCCCeEecCCCCCCCCcc--ceEEEE--ECCE--EEEEcCcc--c-CCCCCccccccceEEecCCCC-eEEEC
Confidence 5789999999999863322222222 112221 2233 22222210 0 000001111234899999999 99999
Q ss_pred CCCCcccCCCCceEEECCcEEEEEeecc-CCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeCCeEEEEEeC
Q 016367 197 GPVPWRLNPGASEALLNGSLHWVTMRYK-NNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAVHCL 274 (390)
Q Consensus 197 ~~~p~~~~~~~~~v~~~G~lywl~~~~~-~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~~~~ 274 (390)
+.+|..... ...+.++|.+|.++.... ........+..||+.+.+|+.+ ++|... .....+..+|+|++....
T Consensus 83 ~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~~~~iyv~GG~ 157 (315)
T 4asc_A 83 PPLPSPRCL-FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV----YGHTVLSHMDLVYVIGGK 157 (315)
T ss_dssp CCBSSCEES-CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC----BSCEEEEETTEEEEECCB
T ss_pred CCCCcchhc-eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc----cceeEEEECCEEEEEeCC
Confidence 887754433 567888999999977531 1111224689999999999988 555443 455677799999995432
Q ss_pred -C--CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------C
Q 016367 275 -D--DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------N 345 (390)
Q Consensus 275 -~--~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~ 345 (390)
. ...-++|.++-. +.+|+++..++. .. . ....++. ++.|++... .
T Consensus 158 ~~~~~~~~~~~~yd~~--~~~W~~~~~~p~-------------~r-------~---~~~~~~~-~~~iyv~GG~~~~~~~ 211 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPK--KFEWKELAPMQT-------------AR-------S---LFGATVH-DGRIIVAAGVTDTGLT 211 (315)
T ss_dssp CTTSCBCCCEEEEETT--TTEEEECCCCSS-------------CC-------B---SCEEEEE-TTEEEEEEEECSSSEE
T ss_pred CCCCcccceEEEEeCC--CCeEEECCCCCC-------------ch-------h---ceEEEEE-CCEEEEEeccCCCCcc
Confidence 1 223467777632 568998654332 10 0 1112222 556666542 1
Q ss_pred CeEEEEeCCCCcEEEEE-EeCCCCceEEEeeeccc
Q 016367 346 GALVSYNPENEELKDLV-IFDPPKWFCSIVHVESL 379 (390)
Q Consensus 346 ~~l~~yd~~t~~~~~v~-~~~~~~~~~~~~y~~sL 379 (390)
..+..||+++++|+++. .......+.+..+...|
T Consensus 212 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l 246 (315)
T 4asc_A 212 SSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTL 246 (315)
T ss_dssp EEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred ceEEEEECCCCeEEECCCCCCcccceeEEEECCEE
Confidence 25999999999999983 22223333444443333
No 16
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.75 E-value=1.4e-05 Score=76.39 Aligned_cols=36 Identities=19% Similarity=0.583 Sum_probs=34.5
Q ss_pred CCCcHHHHHHHHccCCccchhhhhhhhHhhhhhhcC
Q 016367 2 ENLPLDVALDILSRLPITALVRTKCVCRTWQALAQD 37 (390)
Q Consensus 2 ~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~ 37 (390)
+.||+|++.+||+.||+++|+++..|||+|+.++.+
T Consensus 16 ~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 16 TSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp HHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred HHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 469999999999999999999999999999999987
No 17
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.72 E-value=2.4e-05 Score=74.42 Aligned_cols=46 Identities=33% Similarity=0.423 Sum_probs=41.5
Q ss_pred CCCCcHHHHHHHHccCCccchhhhhhhhHhhhhhhcCCChhhhhhh
Q 016367 1 MENLPLDVALDILSRLPITALVRTKCVCRTWQALAQDPRLPIIYHA 46 (390)
Q Consensus 1 i~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~~~~ 46 (390)
++.||+|++..||++|+++++.++.+|||+|+.++.++.+-+....
T Consensus 19 ~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~ 64 (445)
T 2ovr_B 19 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCK 64 (445)
T ss_dssp TTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHT
T ss_pred hHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhhee
Confidence 4679999999999999999999999999999999999877765554
No 18
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.68 E-value=1.6e-06 Score=80.32 Aligned_cols=225 Identities=14% Similarity=0.083 Sum_probs=123.6
Q ss_pred EeecCceEEeeecc---------ccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEecc-cccc
Q 016367 101 VGSCNGLLCVSDAL---------YFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFN-TYRS 170 (390)
Q Consensus 101 ~~s~~GLl~~~~~~---------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~-~~~~ 170 (390)
.+..+|-|.+..+. ....++++||.|++|..++++...++.... ...++ + +++.+..... .+..
T Consensus 61 ~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~-~~~~~---~--~iyv~GG~~~~~~~~ 134 (357)
T 2uvk_A 61 SAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHV-TFVHN---G--KAYVTGGVNQNIFNG 134 (357)
T ss_dssp EEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEE-EEEET---T--EEEEEECCCHHHHHH
T ss_pred EEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccce-EEEEC---C--EEEEEeCcCCCcCcc
Confidence 34456666554432 135799999999999999887522222111 11122 2 3444432110 0000
Q ss_pred ------------------------ccCCCCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCC
Q 016367 171 ------------------------LRDRGWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNN 226 (390)
Q Consensus 171 ------------------------~~~~~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~ 226 (390)
...........+++|+..++ +|+.+..+|.........+.++|.+|.++......
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~ 213 (357)
T 2uvk_A 135 YFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQ-QWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPG 213 (357)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTT-EEEEEEECSSCCCBSCEEEEETTEEEEECCEEETT
T ss_pred cccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCC-cEEECCCCCCCCcccccEEEECCEEEEEeeecCCC
Confidence 00000012358999999999 99999877654433356788899999987643111
Q ss_pred CCCceEEEEEEC--CCceeeee-cCCCCCCCCCcceEEEEeCCeEEEEEeC-CC------------------CcEEEEEE
Q 016367 227 PGPRLRIMSFDL--AEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAVHCL-DD------------------KGMEIWIM 284 (390)
Q Consensus 227 ~~~~~~il~fD~--~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~~~~-~~------------------~~~~IW~l 284 (390)
.....+..||+ .+.+|+.+ ++|..... .....++.+|+|+++... .. ..-++|+.
T Consensus 214 -~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y 290 (357)
T 2uvk_A 214 -LRTDAVFELDFTGNNLKWNKLAPVSSPDGV--AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIH 290 (357)
T ss_dssp -EECCCEEEEECC---CEEEECCCSSTTTCC--BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEE
T ss_pred -cccCceEEEEecCCCCcEEecCCCCCCccc--ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEE
Confidence 11135777876 89999987 44332211 344578899999994431 01 11356666
Q ss_pred eeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-------CCeEEEEeCCCCc
Q 016367 285 KEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA-------NGALVSYNPENEE 357 (390)
Q Consensus 285 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-------~~~l~~yd~~t~~ 357 (390)
+-. +.+|.++-.++. ... ... ++.-++.|++... ...++.+++++++
T Consensus 291 d~~--~~~W~~~~~~p~-------------~r~----------~~~-~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 291 LWH--NGKWDKSGELSQ-------------GRA----------YGV-SLPWNNSLLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp ECC-----CEEEEECSS-------------CCB----------SSE-EEEETTEEEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred ecC--CCceeeCCCCCC-------------Ccc----------cce-eEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 532 568999765553 111 111 2223566766643 1248889999999
Q ss_pred EEEE
Q 016367 358 LKDL 361 (390)
Q Consensus 358 ~~~v 361 (390)
+.+.
T Consensus 345 ~~~~ 348 (357)
T 2uvk_A 345 VTVQ 348 (357)
T ss_dssp CEEE
T ss_pred eEee
Confidence 9876
No 19
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.55 E-value=5e-06 Score=84.10 Aligned_cols=212 Identities=11% Similarity=0.013 Sum_probs=124.8
Q ss_pred cCceEEeeecc---ccccEEEEcCCCcceeccc-Cc-----cCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCC
Q 016367 104 CNGLLCVSDAL---YFNPIIVCNPFTGSYLELA-KA-----TQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDR 174 (390)
Q Consensus 104 ~~GLl~~~~~~---~~~~~~V~NP~T~~~~~LP-~~-----~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~ 174 (390)
.+|.|.+..+. ....++++||.|++|..++ +. +.....+ +.+.....+ +++.+.... .
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h---s~~~~~~~~--~lyv~GG~~----~---- 462 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH---TFTTISRNN--QLLLIGGRK----A---- 462 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC---EEEEETTTT--EEEEECCBS----S----
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce---EEEEEccCC--EEEEEcCCC----C----
Confidence 56666555442 2457999999999999998 52 2211112 222221012 244443211 0
Q ss_pred CCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEE-CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecC----C
Q 016367 175 GWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL-NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGL----P 249 (390)
Q Consensus 175 ~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~l----P 249 (390)
.......+++|+..++ +|+.+..+|..... ..++.+ +|.+|.++..... . .+..||+.+++|+.++. |
T Consensus 463 ~~~~~~dv~~yd~~t~-~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~----~-~v~~yd~~t~~W~~~~~~g~~p 535 (695)
T 2zwa_A 463 PHQGLSDNWIFDMKTR-EWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEG----P-AMLLYNVTEEIFKDVTPKDEFF 535 (695)
T ss_dssp TTCBCCCCEEEETTTT-EEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSS----C-SEEEEETTTTEEEECCCSSGGG
T ss_pred CCCccccEEEEeCCCC-cEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCC----C-CEEEEECCCCceEEccCCCCCC
Confidence 1112357999999999 99999887754433 445664 9999998765411 1 69999999999999863 4
Q ss_pred CCCCCCCcceEEEEeC---CeEEEEEeCC----CCcEEEEEEeeCCCCCc------eEEEEEEccCCCcccccCcCcchh
Q 016367 250 DCGSLSVCNFHLVVLR---GCLSAVHCLD----DKGMEIWIMKEYKVRES------WSKDYIIGTYLPASLRENARPHLE 316 (390)
Q Consensus 250 ~~~~~~~~~~~L~~~~---G~L~~~~~~~----~~~~~IW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~~~~~ 316 (390)
... .....++++ |+|++++... ...-++|..+-. +.. |.++..++. .+
T Consensus 536 ~~r----~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~-------------~~ 596 (695)
T 2zwa_A 536 QNS----LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPL-------------FQ 596 (695)
T ss_dssp GSC----CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGG-------------GC
T ss_pred Ccc----cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCC-------------CC
Confidence 332 223334444 8899954321 123466666633 335 777665332 11
Q ss_pred hhhccCCCCcceEEEEEeeCCceEeeee---------CCeEEEEeCCCCcEEEEEE
Q 016367 317 MLKKSGLGRGSSQVVCDWKNGEILLEYA---------NGALVSYNPENEELKDLVI 363 (390)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~g~il~~~~---------~~~l~~yd~~t~~~~~v~~ 363 (390)
. . .....+.+++.|++... ...+..||+++++|+.+.+
T Consensus 597 -------R-~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 597 -------R-Y-GSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp -------C-B-SCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECCC
T ss_pred -------c-c-cceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEeec
Confidence 0 1 22223444466766542 2359999999999996644
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.54 E-value=9.6e-06 Score=77.04 Aligned_cols=42 Identities=31% Similarity=0.466 Sum_probs=37.5
Q ss_pred CCCcHH----HHHHHHccCCccchhhhhhhhHhhhhhhcCCChhhh
Q 016367 2 ENLPLD----VALDILSRLPITALVRTKCVCRTWQALAQDPRLPII 43 (390)
Q Consensus 2 ~~LP~D----ll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~ 43 (390)
+.||+| ++..||+.|++++|.++.+|||+|+.++.++.+-+.
T Consensus 12 ~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~ 57 (435)
T 1p22_A 12 TALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKK 57 (435)
T ss_dssp HHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred HHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 458999 999999999999999999999999999987765443
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.18 E-value=3.5e-05 Score=77.42 Aligned_cols=122 Identities=9% Similarity=0.024 Sum_probs=77.3
Q ss_pred CceEEeeecc----------ccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCC
Q 016367 105 NGLLCVSDAL----------YFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDR 174 (390)
Q Consensus 105 ~GLl~~~~~~----------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~ 174 (390)
+|-|++..+. ....+.++||.|++|..++.++.....++ .+.++.. .+ +++.+..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~-~~~~~~~-~g--~lyv~GG----------- 261 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFC-PGISMDG-NG--QIVVTGG----------- 261 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSS-CEEEECT-TS--CEEEECS-----------
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCcc-ccccCCC-CC--CEEEeCC-----------
Confidence 7777666432 01268999999999999987743322221 1222221 11 3444331
Q ss_pred CCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEE-CCcEEEEEeeccCCCCCceEEEEEECCCceeeee
Q 016367 175 GWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL-NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI 246 (390)
Q Consensus 175 ~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i 246 (390)
.. ...+++|+..++ .|..+..+|..... ..++.+ +|.+|.++... ........+..||+.+++|+.+
T Consensus 262 -~~-~~~v~~yd~~t~-~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~-~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 262 -ND-AKKTSLYDSSSD-SWIPGPDMQVARGY-QSSATMSDGRVFTIGGSW-SGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp -SS-TTCEEEEEGGGT-EEEECCCCSSCCSS-CEEEECTTSCEEEECCCC-CSSSCCCCEEEEETTTTEEEEE
T ss_pred -CC-CCceEEecCcCC-ceeECCCCCccccc-cceEEecCCeEEEEeCcc-cCCcccccceEeCCCCCcceeC
Confidence 11 237999999999 99999877654432 445667 99999987732 1111123688999999999986
No 22
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.91 E-value=1.3e-06 Score=76.70 Aligned_cols=49 Identities=31% Similarity=0.392 Sum_probs=44.6
Q ss_pred CCCcHHHHHHHHccCCccchhhhhhhhHhhhhhhcCCChhhhhhhcCCC
Q 016367 2 ENLPLDVALDILSRLPITALVRTKCVCRTWQALAQDPRLPIIYHARAST 50 (390)
Q Consensus 2 ~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~~~~~~~~ 50 (390)
+.||+|++..||+.|++++++++.+|||+|+.+..++..-+.++.+..+
T Consensus 6 ~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~ 54 (312)
T 3l2o_B 6 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLP 54 (312)
T ss_dssp HHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGG
T ss_pred HhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCC
Confidence 4699999999999999999999999999999999999988877776544
No 23
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.79 E-value=0.00046 Score=69.74 Aligned_cols=173 Identities=10% Similarity=-0.014 Sum_probs=103.8
Q ss_pred CCeEEEEEeCCCCcccccC-CC-----CcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCC
Q 016367 179 KSDVEVLTVGIDHTWRYLG-PV-----PWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLP 249 (390)
Q Consensus 179 ~~~~~vyss~~~~~W~~~~-~~-----p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP 249 (390)
...+++|+..++ +|+.+. .+ |.... ....+.+ +|.+|.++....... ....+..||+.+.+|+.+ ++|
T Consensus 411 ~~~v~~yd~~~~-~W~~~~~~~p~~~~p~~R~-~hs~~~~~~~~~lyv~GG~~~~~~-~~~dv~~yd~~t~~W~~~~~~p 487 (695)
T 2zwa_A 411 VNEILQLSIHYD-KIDMKNIEVSSSEVPVARM-CHTFTTISRNNQLLLIGGRKAPHQ-GLSDNWIFDMKTREWSMIKSLS 487 (695)
T ss_dssp CCCEEEEEECSS-CEEEEECCCCCSCCCCCCB-SCEEEEETTTTEEEEECCBSSTTC-BCCCCEEEETTTTEEEECCCCS
T ss_pred cCcEEEEECCCC-eEEEeccCCCCCCCCcccc-ceEEEEEccCCEEEEEcCCCCCCC-ccccEEEEeCCCCcEEECCCCC
Confidence 457999999999 999987 43 32222 2567888 999999877542111 113589999999999998 555
Q ss_pred CCCCCCCcceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcce
Q 016367 250 DCGSLSVCNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSS 328 (390)
Q Consensus 250 ~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (390)
... .....+.. +|+|++++...... ++|+.+-. +..|+.+...+. .+. . ... .
T Consensus 488 ~~R----~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~--t~~W~~~~~~g~-------------~p~----~-r~~-~ 541 (695)
T 2zwa_A 488 HTR----FRHSACSLPDGNVLILGGVTEGP-AMLLYNVT--EEIFKDVTPKDE-------------FFQ----N-SLV-S 541 (695)
T ss_dssp BCC----BSCEEEECTTSCEEEECCBCSSC-SEEEEETT--TTEEEECCCSSG-------------GGG----S-CCB-S
T ss_pred CCc----ccceEEEEcCCEEEEECCCCCCC-CEEEEECC--CCceEEccCCCC-------------CCC----c-ccc-e
Confidence 432 34455664 99999965432333 77777632 568987654221 111 0 111 1
Q ss_pred EEEEEeeC-CceEeeeeC--------CeEEEEeCCCCc------EEEEEE-e-CCCCceEEEeee-cccc
Q 016367 329 QVVCDWKN-GEILLEYAN--------GALVSYNPENEE------LKDLVI-F-DPPKWFCSIVHV-ESLF 380 (390)
Q Consensus 329 ~~~~~~~~-g~il~~~~~--------~~l~~yd~~t~~------~~~v~~-~-~~~~~~~~~~y~-~sL~ 380 (390)
..+.+..+ +.|++.... ..+..||+++++ |+++.- . .....+.+..+. ..|+
T Consensus 542 ~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iy 611 (695)
T 2zwa_A 542 AGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLL 611 (695)
T ss_dssp CEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEE
T ss_pred eEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEE
Confidence 11222222 556665421 359999999999 787743 1 222334555555 4443
No 24
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.73 E-value=0.0004 Score=69.75 Aligned_cols=206 Identities=7% Similarity=-0.018 Sum_probs=113.3
Q ss_pred EEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEec-cccccccCCCCCCCCeEEEEEeCCCCcccccC
Q 016367 119 IIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNF-NTYRSLRDRGWPRKSDVEVLTVGIDHTWRYLG 197 (390)
Q Consensus 119 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~-~~~~~~~~~~~~~~~~~~vyss~~~~~W~~~~ 197 (390)
+...+|.+++|..+++++... . ..++-+..+ +++.+.... ..|.. .......+++|+..++ +|+.+.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~---~--~~av~~~~g--~l~v~GG~~~~~~~~----~~~~~~~~~~yd~~t~-~w~~~~ 235 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP---A--AAAIEPTSG--RVLMWSSYRNDAFGG----SPGGITLTSSWDPSTG-IVSDRT 235 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC---S--EEEEETTTT--EEEEEEECCCTTTCS----CCCSEEEEEEECTTTC-CBCCCE
T ss_pred cccCCCCCCeeeeeccCCCCc---e--eEEEEecCC--EEEEEeccccccccc----CCCCeEEEEEEeCCCC-cEEeCc
Confidence 455689999999887765422 1 222333222 444444311 00100 0011236899999999 999987
Q ss_pred CCCcccCCCCc--eEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEe-CCeEEEEEe
Q 016367 198 PVPWRLNPGAS--EALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVL-RGCLSAVHC 273 (390)
Q Consensus 198 ~~p~~~~~~~~--~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~-~G~L~~~~~ 273 (390)
.+|........ ++..+|.+|.++... ...+..||+.+++|..+ ++|... .....+.+ +|+|+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~g~lyv~GG~~------~~~v~~yd~~t~~W~~~~~~~~~R----~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 236 VTVTKHDMFCPGISMDGNGQIVVTGGND------AKKTSLYDSSSDSWIPGPDMQVAR----GYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp EEECSCCCSSCEEEECTTSCEEEECSSS------TTCEEEEEGGGTEEEECCCCSSCC----SSCEEEECTTSCEEEECC
T ss_pred ccCCCCCCccccccCCCCCCEEEeCCCC------CCceEEecCcCCceeECCCCCccc----cccceEEecCCeEEEEeC
Confidence 66554433322 234589999887643 11689999999999988 444332 34566777 999999554
Q ss_pred -CC----CCcEEEEEEeeCCCCCceEEEEEEcc-CCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCe
Q 016367 274 -LD----DKGMEIWIMKEYKVRESWSKDYIIGT-YLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGA 347 (390)
Q Consensus 274 -~~----~~~~~IW~l~~~~~~~~W~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~ 347 (390)
.+ ...+++|-.+ +..|..+..... +++.. +..... ..+.. ...++ ..+|.++.......
T Consensus 306 ~~~~~~~~~~~e~yd~~----t~~W~~~~~~~~~p~~~~------~~~~~~---~~~~~-iyv~G-g~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 306 SWSGGVFEKNGEVYSPS----SKTWTSLPNAKVNPMLTA------DKQGLY---RSDNH-AWLFG-WKKGSVFQAGPSTA 370 (656)
T ss_dssp CCCSSSCCCCEEEEETT----TTEEEEETTSCSGGGCCC------CTTGGG---TTTCS-CCEEE-CGGGCEEECCSSSE
T ss_pred cccCCcccccceEeCCC----CCcceeCCCccccccccc------ccccee---ecCCc-eEEEE-CCCCcEEEecCccc
Confidence 21 2344444333 567987632211 00000 000000 01111 11121 23455554444567
Q ss_pred EEEEeCCCCcEEEE
Q 016367 348 LVSYNPENEELKDL 361 (390)
Q Consensus 348 l~~yd~~t~~~~~v 361 (390)
+..||++++.|...
T Consensus 371 v~~yd~~~~~w~~~ 384 (656)
T 1k3i_A 371 MNWYYTSGSGDVKS 384 (656)
T ss_dssp EEEEECSTTCEEEE
T ss_pred eeeeecCCcceeec
Confidence 99999999997654
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.43 E-value=5.2e-05 Score=69.29 Aligned_cols=41 Identities=34% Similarity=0.593 Sum_probs=37.4
Q ss_pred CCCCcHHHHHHHHccCCccchhhhhhhhHhhhhhhcCCChh
Q 016367 1 MENLPLDVALDILSRLPITALVRTKCVCRTWQALAQDPRLP 41 (390)
Q Consensus 1 i~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~ 41 (390)
++.||+|++.+||.+|+.+++.+++.|||+|+.++.++...
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 46899999999999999999999999999999999877643
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.82 E-value=0.00036 Score=68.94 Aligned_cols=34 Identities=18% Similarity=0.372 Sum_probs=29.5
Q ss_pred CCCCcHHHHHHHHccCC-ccchhhhhhhhHhhhhh
Q 016367 1 MENLPLDVALDILSRLP-ITALVRTKCVCRTWQAL 34 (390)
Q Consensus 1 i~~LP~Dll~eIL~rLP-~ksl~r~r~VcK~W~~l 34 (390)
++.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 46899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.31 E-value=0.0012 Score=65.06 Aligned_cols=34 Identities=18% Similarity=0.276 Sum_probs=31.7
Q ss_pred CCCcHHHHHHHHccC-CccchhhhhhhhHhhhhhh
Q 016367 2 ENLPLDVALDILSRL-PITALVRTKCVCRTWQALA 35 (390)
Q Consensus 2 ~~LP~Dll~eIL~rL-P~ksl~r~r~VcK~W~~li 35 (390)
..||||++.+||++| |.+++.+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 369999999999999 8999999999999999883
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=93.99 E-value=3.2 Score=36.97 Aligned_cols=197 Identities=10% Similarity=-0.036 Sum_probs=101.8
Q ss_pred CceEEeeecc---ccccEEEEcCCCcceec-ccCc-cCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCC
Q 016367 105 NGLLCVSDAL---YFNPIIVCNPFTGSYLE-LAKA-TQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRK 179 (390)
Q Consensus 105 ~GLl~~~~~~---~~~~~~V~NP~T~~~~~-LP~~-~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 179 (390)
+|+..+..+. ....+.++||.|++... ++.. ..........++.++. +...+. .. . .
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~---~~lyv~-~~-~-------------~ 63 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD---GIGWIV-VN-N-------------S 63 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET---TEEEEE-EG-G-------------G
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC---CEEEEE-Ec-C-------------C
Confidence 4555555431 25689999999998653 2111 0001011123444543 232222 11 1 2
Q ss_pred CeEEEEEeCCCCcc-cccCCCCcccCCCCceEEECCcEEEEE-eeccCCCCCceEEEEEECCCceee-eecCCCCCCCCC
Q 016367 180 SDVEVLTVGIDHTW-RYLGPVPWRLNPGASEALLNGSLHWVT-MRYKNNPGPRLRIMSFDLAEEDFG-EIGLPDCGSLSV 256 (390)
Q Consensus 180 ~~~~vyss~~~~~W-~~~~~~p~~~~~~~~~v~~~G~lywl~-~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~ 256 (390)
-.+.+++..++ .- +.+.. ...+..-.+.-+|.+|... ... .|..+|+.+.+.. .++.+.......
T Consensus 64 ~~v~viD~~t~-~~~~~i~~---~~~p~~i~~~~~g~lyv~~~~~~--------~v~~iD~~t~~~~~~i~~g~~~~~~~ 131 (328)
T 3dsm_A 64 HVIFAIDINTF-KEVGRITG---FTSPRYIHFLSDEKAYVTQIWDY--------RIFIINPKTYEITGYIECPDMDMESG 131 (328)
T ss_dssp TEEEEEETTTC-CEEEEEEC---CSSEEEEEEEETTEEEEEEBSCS--------EEEEEETTTTEEEEEEECTTCCTTTC
T ss_pred CEEEEEECccc-EEEEEcCC---CCCCcEEEEeCCCeEEEEECCCC--------eEEEEECCCCeEEEEEEcCCccccCC
Confidence 46889999888 43 22311 1111011233588887766 333 8999999988765 456655110000
Q ss_pred cceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 257 CNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 257 ~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
....+...+|+|++........+.++-++ +. ....+|.. ... ..-+.+..+
T Consensus 132 ~p~~i~~~~~~lyv~~~~~~~~v~viD~~----t~--~~~~~i~~-------------g~~----------p~~i~~~~d 182 (328)
T 3dsm_A 132 STEQMVQYGKYVYVNCWSYQNRILKIDTE----TD--KVVDELTI-------------GIQ----------PTSLVMDKY 182 (328)
T ss_dssp BCCCEEEETTEEEEEECTTCCEEEEEETT----TT--EEEEEEEC-------------SSC----------BCCCEECTT
T ss_pred CcceEEEECCEEEEEcCCCCCEEEEEECC----CC--eEEEEEEc-------------CCC----------ccceEEcCC
Confidence 11133346888888654114455554433 22 23344443 111 112355667
Q ss_pred CceEeeeeC-----------CeEEEEeCCCCcEEE
Q 016367 337 GEILLEYAN-----------GALVSYNPENEELKD 360 (390)
Q Consensus 337 g~il~~~~~-----------~~l~~yd~~t~~~~~ 360 (390)
|++++.... ..++.+|++++++.+
T Consensus 183 G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 183 NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred CCEEEEECCCccCCccccCCceEEEEECCCCeEEE
Confidence 777776543 479999999998764
No 29
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=92.14 E-value=5.1 Score=34.29 Aligned_cols=193 Identities=9% Similarity=-0.017 Sum_probs=97.6
Q ss_pred EEeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCC
Q 016367 100 VVGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRK 179 (390)
Q Consensus 100 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 179 (390)
+.-..+|-+.+.... ...++++|| +++...+..+.. .....++.+|+.. . +.... . ..
T Consensus 104 i~~~~~g~l~v~~~~-~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~~g-~--l~v~~--~------------~~ 161 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMN-GNRIGRITD-DGKIREYELPNK---GSYPSFITLGSDN-A--LWFTE--N------------QN 161 (299)
T ss_dssp EEECTTSCEEEEETT-TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTS-C--EEEEE--T------------TT
T ss_pred eEECCCCCEEEEecC-CceEEEECC-CCCEEEecCCCC---CCCCceEEEcCCC-C--EEEEe--C------------CC
Confidence 333446766665431 467999999 776655432211 1124467777643 2 22111 1 12
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
..+.+|+. ++ ....... +.... ...++.+ +|.+|+..... ..|..||+ +.++..+.+|.... .
T Consensus 162 ~~i~~~~~-~g-~~~~~~~-~~~~~-~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~-~g~~~~~~~~~~~~---~ 226 (299)
T 2z2n_A 162 NAIGRITE-SG-DITEFKI-PTPAS-GPVGITKGNDDALWFVEIIG-------NKIGRITT-SGEITEFKIPTPNA---R 226 (299)
T ss_dssp TEEEEECT-TC-CEEEEEC-SSTTC-CEEEEEECTTSSEEEEETTT-------TEEEEECT-TCCEEEEECSSTTC---C
T ss_pred CEEEEEcC-CC-cEEEeeC-CCCCC-cceeEEECCCCCEEEEccCC-------ceEEEECC-CCcEEEEECCCCCC---C
Confidence 45777777 66 6554311 11111 1123444 47775543321 28999999 77777666663221 2
Q ss_pred ceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 258 NFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 258 ~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
-..+... +|.|++.... ...+.+|-. .+ ....+.. .. . ... ...+.+ .+
T Consensus 227 ~~~i~~~~~g~l~v~~~~-~~~i~~~d~--~g------~~~~~~~-------------~~-----~-~~~-~~~i~~-~~ 276 (299)
T 2z2n_A 227 PHAITAGAGIDLWFTEWG-ANKIGRLTS--NN------IIEEYPI-------------QI-----K-SAE-PHGICF-DG 276 (299)
T ss_dssp EEEEEECSTTCEEEEETT-TTEEEEEET--TT------EEEEEEC-------------SS-----S-SCC-EEEEEE-CS
T ss_pred ceeEEECCCCCEEEeccC-CceEEEECC--CC------ceEEEeC-------------CC-----C-CCc-cceEEe-cC
Confidence 2334443 5787776543 445555533 11 1122222 00 0 011 444556 77
Q ss_pred CceEeeeeCCeEEEEeCCCCcEE
Q 016367 337 GEILLEYANGALVSYNPENEELK 359 (390)
Q Consensus 337 g~il~~~~~~~l~~yd~~t~~~~ 359 (390)
|.+++....+++..||+++++++
T Consensus 277 g~l~v~~~~~~l~~~~~~~~~~~ 299 (299)
T 2z2n_A 277 ETIWFAMECDKIGKLTLIKDNME 299 (299)
T ss_dssp SCEEEEETTTEEEEEEEC-----
T ss_pred CCEEEEecCCcEEEEEcCcccCC
Confidence 88888766678999999988764
No 30
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.65 E-value=6.9 Score=34.72 Aligned_cols=141 Identities=10% Similarity=0.055 Sum_probs=75.4
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEEC----CcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCC
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLN----GSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSL 254 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~----G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~ 254 (390)
-.+.+++..++ .|..+......... -..+.+. |.+...+..+ ..|..+|+.+..- ..+.+..+..
T Consensus 79 g~v~iwd~~~~-~~~~~~~~~~~~~~-v~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~- 148 (379)
T 3jrp_A 79 GKVLIWKEENG-RWSQIAVHAVHSAS-VNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAI- 148 (379)
T ss_dssp SCEEEEEEETT-EEEEEEEECCCSSC-EEEEEECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECCTT-
T ss_pred CEEEEEEcCCC-ceeEeeeecCCCcc-eEEEEeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCCCC-
Confidence 46889999999 87665432211111 1233332 4333333222 2788888876522 1111111111
Q ss_pred CCcceEEEEe--------------CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhc
Q 016367 255 SVCNFHLVVL--------------RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKK 320 (390)
Q Consensus 255 ~~~~~~L~~~--------------~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~ 320 (390)
....+... +|.+.++... +..+.||-+... ...|.....+.. ..
T Consensus 149 --~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~--~~~~~~~~~~~~-------------h~---- 206 (379)
T 3jrp_A 149 --GVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSD--AQTYVLESTLEG-------------HS---- 206 (379)
T ss_dssp --CEEEEEECCCC----------CTTCEEEEEET-TSCEEEEEEETT--TTEEEEEEEECC-------------CS----
T ss_pred --ceEEEEEcCccccccccccCCCCCCEEEEEeC-CCeEEEEEecCC--CcceeeEEEEec-------------cc----
Confidence 11222222 4666665555 778999999843 345666665553 11
Q ss_pred cCCCCcceEEEEEeeC---CceEeeee-CCeEEEEeCCCCc
Q 016367 321 SGLGRGSSQVVCDWKN---GEILLEYA-NGALVSYNPENEE 357 (390)
Q Consensus 321 ~~~~~~~~~~~~~~~~---g~il~~~~-~~~l~~yd~~t~~ 357 (390)
.. +.-+.+.++ +.+++... ++.+..||++++.
T Consensus 207 ----~~-v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 207 ----DW-VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp ----SC-EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ----Cc-EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 11 555667666 66655554 5668899988764
No 31
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.14 E-value=8.8 Score=35.02 Aligned_cols=196 Identities=14% Similarity=0.096 Sum_probs=101.6
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceec-ccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCe
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLE-LAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSD 181 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 181 (390)
+.+|-+++.... ...+.+||+.+++... ++... .....+.+++..+ +-++. .. ..-.
T Consensus 178 ~~~~~~~~s~~~-d~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~l~~~-~~--------------~~~~ 235 (433)
T 3bws_A 178 PEHNELWVSQMQ-ANAVHVFDLKTLAYKATVDLTG-----KWSKILLYDPIRD-LVYCS-NW--------------ISED 235 (433)
T ss_dssp GGGTEEEEEEGG-GTEEEEEETTTCCEEEEEECSS-----SSEEEEEEETTTT-EEEEE-ET--------------TTTE
T ss_pred cCCCEEEEEECC-CCEEEEEECCCceEEEEEcCCC-----CCeeEEEEcCCCC-EEEEE-ec--------------CCCc
Confidence 446665555432 5789999998876432 33111 1244677777543 32222 11 1247
Q ss_pred EEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCC-CCCceEEEEEECCCceeeee-cCCCCCCCCCc
Q 016367 182 VEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNN-PGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVC 257 (390)
Q Consensus 182 ~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~-~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~ 257 (390)
+.+|+.+++ .....-..... ...+.+ +|...+.+...... ......|..+|+.+.+.... ..+..
T Consensus 236 i~~~d~~~~-~~~~~~~~~~~----~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~------ 304 (433)
T 3bws_A 236 ISVIDRKTK-LEIRKTDKIGL----PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN------ 304 (433)
T ss_dssp EEEEETTTT-EEEEECCCCSE----EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC------
T ss_pred EEEEECCCC-cEEEEecCCCC----ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC------
Confidence 889999887 54322111111 122333 56555555432000 00124899999987655433 22221
Q ss_pred ceEEEE-eCC-eEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee
Q 016367 258 NFHLVV-LRG-CLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK 335 (390)
Q Consensus 258 ~~~L~~-~~G-~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
...+.. -+| .|++.... ...+.+|-++. ......++. .. . ...+++..
T Consensus 305 ~~~~~~~~~g~~l~~~~~~-~~~v~v~d~~~------~~~~~~~~~-------------~~---------~-~~~~~~s~ 354 (433)
T 3bws_A 305 KRHIVSGNTENKIYVSDMC-CSKIEVYDLKE------KKVQKSIPV-------------FD---------K-PNTIALSP 354 (433)
T ss_dssp EEEEEECSSTTEEEEEETT-TTEEEEEETTT------TEEEEEEEC-------------SS---------S-EEEEEECT
T ss_pred cceEEECCCCCEEEEEecC-CCEEEEEECCC------CcEEEEecC-------------CC---------C-CCeEEEcC
Confidence 112222 245 45555555 77899998762 233444443 11 1 44556767
Q ss_pred CCceEeeeeC----------------CeEEEEeCCCCcEEEE
Q 016367 336 NGEILLEYAN----------------GALVSYNPENEELKDL 361 (390)
Q Consensus 336 ~g~il~~~~~----------------~~l~~yd~~t~~~~~v 361 (390)
+|..++.... +.++.||+++++....
T Consensus 355 dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 355 DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred CCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 7764444322 3799999999876543
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.03 E-value=8.4 Score=34.56 Aligned_cols=186 Identities=10% Similarity=-0.002 Sum_probs=97.8
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+.|||..+++....-.... .......+.+.|..+.+-+.+ . . ...+.+++..+. ..+.
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~--~-~-------------d~~i~iwd~~~~-~~~~ 155 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMG--PGDAITGMKFNQFNTNQLFVS--S-I-------------RGATTLRDFSGS-VIQV 155 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCS--TTCBEEEEEEETTEEEEEEEE--E-T-------------TTEEEEEETTSC-EEEE
T ss_pred CCeEEEEeCCCcccceeeecCC--cCCceeEEEeCCCCCCEEEEE--e-C-------------CCEEEEEECCCC-ceEE
Confidence 4678899998877654432211 112345677776433333322 1 1 246888888876 6655
Q ss_pred cCCCCcccCCC-CceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEe-CCe-EEEEE
Q 016367 196 LGPVPWRLNPG-ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL-RGC-LSAVH 272 (390)
Q Consensus 196 ~~~~p~~~~~~-~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~-~G~-L~~~~ 272 (390)
........... .-...-+|.....+..+ ..|..+|+..+....+..... .-..+... +|. +.+..
T Consensus 156 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDVSVSRQMLATGDST-------GRLLLLGLDGHEIFKEKLHKA-----KVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp EECCCCSSCCEEEEEEETTTTEEEEEETT-------SEEEEEETTSCEEEEEECSSS-----CEEEEEECSSCTTEEEEE
T ss_pred EeccCCCCCCeEEEEECCCCCEEEEECCC-------CCEEEEECCCCEEEEeccCCC-----cEEEEEECCCCCCEEEEE
Confidence 43211100000 11122245543333322 388999997666555543222 12233332 455 55655
Q ss_pred eCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee-CCceEeee-eCCeEEE
Q 016367 273 CLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK-NGEILLEY-ANGALVS 350 (390)
Q Consensus 273 ~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~il~~~-~~~~l~~ 350 (390)
.. +..+.||-+....... .....+.. .. . ..-+.+.. +|..++.. .++.+..
T Consensus 224 ~~-d~~i~iwd~~~~~~~~--~~~~~~~~-------------~~---------~-v~~~~~s~~~~~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 224 SV-DATVKLWDLRNIKDKN--SYIAEMPH-------------EK---------P-VNAAYFNPTDSTKLLTTDQRNEIRV 277 (383)
T ss_dssp ET-TSEEEEEEGGGCCSTT--CEEEEEEC-------------SS---------C-EEEEEECTTTSCEEEEEESSSEEEE
T ss_pred eC-CCEEEEEeCCCCCccc--ceEEEecC-------------CC---------c-eEEEEEcCCCCCEEEEEcCCCcEEE
Confidence 54 7799999988532111 23333332 11 1 55567777 77766554 4678999
Q ss_pred EeCCCCcE
Q 016367 351 YNPENEEL 358 (390)
Q Consensus 351 yd~~t~~~ 358 (390)
||+++.+.
T Consensus 278 wd~~~~~~ 285 (383)
T 3ei3_B 278 YSSYDWSK 285 (383)
T ss_dssp EETTBTTS
T ss_pred EECCCCcc
Confidence 99998764
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.55 E-value=9.2 Score=34.21 Aligned_cols=210 Identities=10% Similarity=-0.042 Sum_probs=101.5
Q ss_pred cCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEE
Q 016367 104 CNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVE 183 (390)
Q Consensus 104 ~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 183 (390)
-++.++.... .+.+.|||..|++..................+.+.|.. ++-+.+ . . .-.+.
T Consensus 92 ~d~~l~~~s~--dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sg--s-~-------------d~~i~ 152 (344)
T 4gqb_B 92 GERGILVASD--SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSG--S-K-------------DICIK 152 (344)
T ss_dssp TTTEEEEEET--TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS-SEEEEE--E-T-------------TSCEE
T ss_pred CCCeEEEEEC--CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC-CEEEEE--e-C-------------CCeEE
Confidence 3455544443 57899999999875543322111111234567777743 332222 1 1 24688
Q ss_pred EEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceee-eecCCCCCCCCCcceE
Q 016367 184 VLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFG-EIGLPDCGSLSVCNFH 260 (390)
Q Consensus 184 vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~ 260 (390)
+++..++ .=.. .+. +....-..+.+ +|.-+.+.... ...|..+|+.+.+.. .+..+.... ....
T Consensus 153 iwd~~~~-~~~~--~~~-~h~~~V~~~~~~~~~~~~l~s~s~------D~~v~iwd~~~~~~~~~~~~~~~~~---~~~~ 219 (344)
T 4gqb_B 153 VWDLAQQ-VVLS--SYR-AHAAQVTCVAASPHKDSVFLSCSE------DNRILLWDTRCPKPASQIGCSAPGY---LPTS 219 (344)
T ss_dssp EEETTTT-EEEE--EEC-CCSSCEEEEEECSSCTTEEEEEET------TSCEEEEETTSSSCEEECC----CC---CEEE
T ss_pred EEECCCC-cEEE--EEc-CcCCceEEEEecCCCCCceeeecc------ccccccccccccceeeeeecceeec---ccee
Confidence 8888877 2211 110 11111112222 33222222221 126888999876543 333332211 1122
Q ss_pred EEEe--CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc
Q 016367 261 LVVL--RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE 338 (390)
Q Consensus 261 L~~~--~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (390)
+... ++.+.+.... +..+.||-++.. ..+.++.- .... +.-+++..+|.
T Consensus 220 ~~~~p~~~~~l~sg~~-dg~v~~wd~~~~------~~~~~~~~---------------------h~~~-v~~v~fsp~g~ 270 (344)
T 4gqb_B 220 LAWHPQQSEVFVFGDE-NGTVSLVDTKST------SCVLSSAV---------------------HSQC-VTGLVFSPHSV 270 (344)
T ss_dssp EEECSSCTTEEEEEET-TSEEEEEESCC--------CCEEEEC---------------------CSSC-EEEEEECSSSS
T ss_pred eeecCCCCcceEEecc-CCcEEEEECCCC------cEEEEEcC---------------------CCCC-EEEEEEccCCC
Confidence 3322 4566666665 778999976631 12223222 1111 55567777664
Q ss_pred -eEeee-eCCeEEEEeCCCCcEEEEEEeCCCCceEEEeee
Q 016367 339 -ILLEY-ANGALVSYNPENEELKDLVIFDPPKWFCSIVHV 376 (390)
Q Consensus 339 -il~~~-~~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~ 376 (390)
++... .++.+..||.+++++.+ +.+.......+.+.
T Consensus 271 ~~lasgs~D~~i~vwd~~~~~~~~--~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 271 PFLASLSEDCSLAVLDSSLSELFR--SQAHRDFVRDATWS 308 (344)
T ss_dssp CCEEEEETTSCEEEECTTCCEEEE--ECCCSSCEEEEEEC
T ss_pred eEEEEEeCCCeEEEEECCCCcEEE--EcCCCCCEEEEEEe
Confidence 55443 46679999999987654 34444444444443
No 34
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.86 E-value=6.1 Score=36.52 Aligned_cols=187 Identities=9% Similarity=0.011 Sum_probs=90.3
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
.+.+.|||..+++...+-..... ......+.|.|..+.+-+.+ . ..-.+.+++.+++ .-+.
T Consensus 141 dg~i~lWd~~~~~~~~~~~~~gH--~~~V~~l~f~p~~~~~l~s~-s---------------~D~~v~iwd~~~~-~~~~ 201 (435)
T 4e54_B 141 GGDIMLWNFGIKDKPTFIKGIGA--GGSITGLKFNPLNTNQFYAS-S---------------MEGTTRLQDFKGN-ILRV 201 (435)
T ss_dssp TSCEEEECSSCCSCCEEECCCSS--SCCCCEEEECSSCTTEEEEE-C---------------SSSCEEEEETTSC-EEEE
T ss_pred CCEEEEEECCCCCceeEEEccCC--CCCEEEEEEeCCCCCEEEEE-e---------------CCCEEEEeeccCC-ceeE
Confidence 57899999988865433222111 11234677887655543322 1 1235778888776 5444
Q ss_pred cCCCCcccCCC-CceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEe-CCe-EEEEE
Q 016367 196 LGPVPWRLNPG-ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL-RGC-LSAVH 272 (390)
Q Consensus 196 ~~~~p~~~~~~-~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~-~G~-L~~~~ 272 (390)
........... .-.+.-+|.+...+... ..|..+|+.++....+..... .-..+... +|. +.+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-------g~i~~wd~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNV-------GNVILLNMDGKELWNLRMHKK-----KVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSS-------SBEEEEESSSCBCCCSBCCSS-----CEEEEEECTTCSSEEEEE
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCC-------CcEeeeccCcceeEEEecccc-----eEEeeeecCCCceEEEEe
Confidence 32211000000 11122245544433322 268888887655433322111 11222222 343 45455
Q ss_pred eCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeee-eCCeEEEE
Q 016367 273 CLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY-ANGALVSY 351 (390)
Q Consensus 273 ~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~-~~~~l~~y 351 (390)
.. +..+.||-+........ +.. .. +.... +.-+++..+|..++.. .++.+..|
T Consensus 270 s~-d~~v~iwd~~~~~~~~~------~~~-------------~~-----~h~~~-v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 270 SV-DQTVKIWDLRQVRGKAS------FLY-------------SL-----PHRHP-VNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp ET-TSBCCEEETTTCCSSSC------CSB-------------CC-----BCSSC-EEECCBCTTSSEEEEEESSSCEEEE
T ss_pred cC-cceeeEEecccccccce------EEE-------------ee-----ecccc-ccceeECCCCCeeEEEcCCCEEEEE
Confidence 54 67899997763211110 000 00 11111 4445566677665554 35678899
Q ss_pred eCCCCcEE
Q 016367 352 NPENEELK 359 (390)
Q Consensus 352 d~~t~~~~ 359 (390)
|.++....
T Consensus 324 d~~~~~~~ 331 (435)
T 4e54_B 324 SASQWDCP 331 (435)
T ss_dssp ESSSSSSE
T ss_pred ECCCCccc
Confidence 98876543
No 35
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.56 E-value=12 Score=34.17 Aligned_cols=147 Identities=16% Similarity=0.085 Sum_probs=75.9
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
|.+++|-... ...++|||..|++...+-...... .....+.+.|. ++|-+++ . . .-.+
T Consensus 114 S~~n~lAvgl---d~tV~lWd~~tg~~~~~~~~~~~~--~~V~sv~fspd-g~~lasg--s-~-------------Dg~v 171 (420)
T 4gga_A 114 SSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQPG--EYISSVAWIKE-GNYLAVG--T-S-------------SAEV 171 (420)
T ss_dssp CTTSEEEEEE---TTEEEEEETTTCCEEEEEECCSTT--CCEEEEEECTT-SSEEEEE--E-T-------------TSCE
T ss_pred CCCCEEEEEe---CCEEEEEECCCCCEEEEEEecCCC--CcEEEEEECCC-CCEEEEE--E-C-------------CCeE
Confidence 3456554333 478999999999876543332111 13456777774 4454433 1 1 2468
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEE
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLV 262 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~ 262 (390)
.+++..++ .-.. .+. .......++..+|.+-..+... ..+..+|..........+..+.. ....+.
T Consensus 172 ~iWd~~~~-~~~~--~~~-~h~~~v~~~s~~~~~l~sgs~d-------~~i~~~d~~~~~~~~~~~~~h~~---~~~~~~ 237 (420)
T 4gga_A 172 QLWDVQQQ-KRLR--NMT-SHSARVGSLSWNSYILSSGSRS-------GHIHHHDVRVAEHHVATLSGHSQ---EVCGLR 237 (420)
T ss_dssp EEEETTTT-EEEE--EEC-CCSSCEEEEEEETTEEEEEETT-------SEEEEEETTSSSCEEEEEECCSS---CEEEEE
T ss_pred EEEEcCCC-cEEE--EEe-CCCCceEEEeeCCCEEEEEeCC-------CceeEeeecccceeeEEeccccc---ceeeee
Confidence 88998887 3211 110 1111123455666554333322 36777887654443332222221 111222
Q ss_pred -EeCCeEEEEEeCCCCcEEEEEEee
Q 016367 263 -VLRGCLSAVHCLDDKGMEIWIMKE 286 (390)
Q Consensus 263 -~~~G~L~~~~~~~~~~~~IW~l~~ 286 (390)
..+|...+.... +..+.||-...
T Consensus 238 ~~~~g~~l~s~~~-D~~v~i~~~~~ 261 (420)
T 4gga_A 238 WAPDGRHLASGGN-DNLVNVWPSAP 261 (420)
T ss_dssp ECTTSSEEEEEET-TSCEEEEESSC
T ss_pred ecCCCCeeeeeec-cccceEEeecc
Confidence 235665555555 77899998764
No 36
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=89.38 E-value=19 Score=36.12 Aligned_cols=141 Identities=10% Similarity=0.051 Sum_probs=74.0
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEEC----CcEEEEEeeccCCCCCceEEEEEECCCceee-eecCCCCCCC
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLN----GSLHWVTMRYKNNPGPRLRIMSFDLAEEDFG-EIGLPDCGSL 254 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~----G~lywl~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~ 254 (390)
-.+.+++..++ .|..+......... -..+.+. |.....+..+ ..|..+|+.+..-. .+.+..+..
T Consensus 77 g~I~vwd~~~~-~~~~~~~~~~h~~~-V~~v~~sp~~~~~~l~sgs~d-------g~I~vwdl~~~~~~~~~~~~~~~~- 146 (753)
T 3jro_A 77 GKVLIWKEENG-RWSQIAVHAVHSAS-VNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAI- 146 (753)
T ss_dssp SCEEEEEEETT-EEEEEEEECCCSSC-EEEEEECCGGGCSEEEEEETT-------SEEEEEECCSSSCCCCEEEECCSS-
T ss_pred CeEEEEECCCC-cccccccccCCCCC-eEEEEECCCCCCCEEEEEeCC-------CcEEEEEeecCCCcceeEeecCCC-
Confidence 46889999998 87665432211111 1233332 4443333322 27888888765221 111111110
Q ss_pred CCcceEEEEe--------------CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhc
Q 016367 255 SVCNFHLVVL--------------RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKK 320 (390)
Q Consensus 255 ~~~~~~L~~~--------------~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~ 320 (390)
....+... +|.+.++... +..+.||-+... ...+.....+.. ..
T Consensus 147 --~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~~--~~~~~~~~~~~~-------------h~---- 204 (753)
T 3jro_A 147 --GVNSASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSD--AQTYVLESTLEG-------------HS---- 204 (753)
T ss_dssp --CEEEEEECCCC---------CGGGCCEEEEET-TSCEEEEEEETT--TTEEEEEEEECC-------------CS----
T ss_pred --ceEEEEecCcccccccccccCCCCCEEEEEEC-CCeEEEEeccCC--cccceeeeeecC-------------CC----
Confidence 11122211 3566665555 778999999853 335555555543 11
Q ss_pred cCCCCcceEEEEEeeC---CceEeeee-CCeEEEEeCCCCc
Q 016367 321 SGLGRGSSQVVCDWKN---GEILLEYA-NGALVSYNPENEE 357 (390)
Q Consensus 321 ~~~~~~~~~~~~~~~~---g~il~~~~-~~~l~~yd~~t~~ 357 (390)
.. +.-+.+.++ +.+++... ++.+..||+.+++
T Consensus 205 ----~~-V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 205 ----DW-VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp ----SC-EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred ----Cc-EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 11 555666666 66666554 5668899988763
No 37
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.18 E-value=11 Score=33.29 Aligned_cols=124 Identities=8% Similarity=-0.037 Sum_probs=66.8
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecC-CCCCCCCCcceEEEE-eCCe-EEEEEeCCCCcEEEEEEeeCCC
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGL-PDCGSLSVCNFHLVV-LRGC-LSAVHCLDDKGMEIWIMKEYKV 289 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~l-P~~~~~~~~~~~L~~-~~G~-L~~~~~~~~~~~~IW~l~~~~~ 289 (390)
+|.+|...... ....|..||+.+.+...+.. +.... .-..+.. -+|+ |++.... ...+.+|.++..+
T Consensus 50 dg~l~~~~~~~-----~~~~v~~~~~~~g~~~~~~~~~~~~~---~p~~~a~spdg~~l~~~~~~-~~~v~v~~~~~~g- 119 (347)
T 3hfq_A 50 KDCLYSVDKED-----DEGGIAAWQIDGQTAHKLNTVVAPGT---PPAYVAVDEARQLVYSANYH-KGTAEVMKIAADG- 119 (347)
T ss_dssp TCEEEEEEEET-----TEEEEEEEEEETTEEEEEEEEEEESC---CCSEEEEETTTTEEEEEETT-TTEEEEEEECTTS-
T ss_pred CCeEEEEEecC-----CCceEEEEEecCCcEEEeeeeecCCC---CCEEEEECCCCCEEEEEeCC-CCEEEEEEeCCCC-
Confidence 78877776531 01379999998777665522 21111 1223333 3566 5445544 7789999997533
Q ss_pred CCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-CCeEEEEeCC-CCcEEEE
Q 016367 290 RESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA-NGALVSYNPE-NEELKDL 361 (390)
Q Consensus 290 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-~~~l~~yd~~-t~~~~~v 361 (390)
....+..+... .. .+.. ...... ..-+++..+|++++... ++.+..||++ ++++..+
T Consensus 120 --~~~~~~~~~~~-~~---------~p~~--~~~~~~-~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 120 --ALTLTDTVQHS-GH---------GPRP--EQDGSH-IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp --CEEEEEEEECC-CC---------CSST--TCSSCC-EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred --CeeecceeecC-CC---------CCCc--cccCCC-ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 34444444330 00 0000 001112 44567777888544433 4568999998 6666654
No 38
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=87.77 E-value=15 Score=32.89 Aligned_cols=188 Identities=11% Similarity=0.018 Sum_probs=96.9
Q ss_pred ecCc-eEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCe
Q 016367 103 SCNG-LLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSD 181 (390)
Q Consensus 103 s~~G-Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 181 (390)
+.+| .|.+.... ...+.+||+.|++....-.... ...++.++|.. ++-++. . . ....
T Consensus 40 s~dg~~l~~~~~~-d~~i~v~d~~~~~~~~~~~~~~-----~v~~~~~spdg-~~l~~~-~--~------------~~~~ 97 (391)
T 1l0q_A 40 SPDGTKVYVANAH-SNDVSIIDTATNNVIATVPAGS-----SPQGVAVSPDG-KQVYVT-N--M------------ASST 97 (391)
T ss_dssp CTTSSEEEEEEGG-GTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTS-SEEEEE-E--T------------TTTE
T ss_pred CCCCCEEEEECCC-CCeEEEEECCCCeEEEEEECCC-----CccceEECCCC-CEEEEE-E--C------------CCCE
Confidence 3444 44444321 5789999999988654322211 24467777743 332222 1 1 1247
Q ss_pred EEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcc
Q 016367 182 VEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCN 258 (390)
Q Consensus 182 ~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~ 258 (390)
+.+|+..++ .-...-.... ....+.+ +|...++.... ...|..+|+.+.+.... ..... .
T Consensus 98 v~v~d~~~~-~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~------~ 160 (391)
T 1l0q_A 98 LSVIDTTSN-TVAGTVKTGK----SPLGLALSPDGKKLYVTNNG------DKTVSVINTVTKAVINTVSVGRS------P 160 (391)
T ss_dssp EEEEETTTT-EEEEEEECSS----SEEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECCSS------E
T ss_pred EEEEECCCC-eEEEEEeCCC----CcceEEECCCCCEEEEEeCC------CCEEEEEECCCCcEEEEEecCCC------c
Confidence 899999888 4332211110 0122333 46533333321 13899999987765433 32211 1
Q ss_pred eEEEE-eCCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 259 FHLVV-LRGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 259 ~~L~~-~~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
..+.. -+|+ |++.... ...+.+|-++. ......+.. .. . ...+++..+
T Consensus 161 ~~~~~~~dg~~l~~~~~~-~~~v~~~d~~~------~~~~~~~~~-------------~~---------~-~~~~~~~~~ 210 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANFD-SMSISVIDTVT------NSVIDTVKV-------------EA---------A-PSGIAVNPE 210 (391)
T ss_dssp EEEEECTTSSEEEEEETT-TTEEEEEETTT------TEEEEEEEC-------------SS---------E-EEEEEECTT
T ss_pred ceEEECCCCCEEEEEeCC-CCEEEEEECCC------CeEEEEEec-------------CC---------C-ccceEECCC
Confidence 22222 2454 4445444 67889987652 233344433 11 1 334566666
Q ss_pred CceEeee----eCCeEEEEeCCCCcEE
Q 016367 337 GEILLEY----ANGALVSYNPENEELK 359 (390)
Q Consensus 337 g~il~~~----~~~~l~~yd~~t~~~~ 359 (390)
|+.++.. .+..+..||+++++..
T Consensus 211 g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 211 GTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 6644443 3567999999887653
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=87.09 E-value=16 Score=32.49 Aligned_cols=194 Identities=14% Similarity=0.054 Sum_probs=85.9
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCc-cc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHT-WR 194 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~-W~ 194 (390)
...+.|||..++.+..+-..... ......+.+.|.. ++-+.+ . . .-.+.+|+..++ . |+
T Consensus 32 d~~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~-~~l~s~--s-~-------------d~~v~vwd~~~~-~~~~ 91 (377)
T 3dwl_C 32 TNQVELYEQDGNGWKHARTFSDH--DKIVTCVDWAPKS-NRIVTC--S-Q-------------DRNAYVYEKRPD-GTWK 91 (377)
T ss_dssp SSCBCEEEEETTEEEECCCBCCC--SSCEEEEEECTTT-CCEEEE--E-T-------------TSSEEEC-------CCC
T ss_pred CCEEEEEEccCCceEEEEEEecC--CceEEEEEEeCCC-CEEEEE--e-C-------------CCeEEEEEcCCC-Ccee
Confidence 46788899888754433333211 1134567777753 332222 1 1 246888888888 5 55
Q ss_pred ccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCce----eeeecCCCCCCCCCcceEEEEe-CCe
Q 016367 195 YLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEED----FGEIGLPDCGSLSVCNFHLVVL-RGC 267 (390)
Q Consensus 195 ~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~----~~~i~lP~~~~~~~~~~~L~~~-~G~ 267 (390)
....+... ...-..+.+ +|.....+..+ ..|..+|+.+.+ ...+..|... .-..+... +|+
T Consensus 92 ~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~~ 159 (377)
T 3dwl_C 92 QTLVLLRL-NRAATFVRWSPNEDKFAVGSGA-------RVISVCYFEQENDWWVSKHLKRPLRS----TILSLDWHPNNV 159 (377)
T ss_dssp CEEECCCC-SSCEEEEECCTTSSCCEEEESS-------SCEEECCC-----CCCCEEECSSCCS----CEEEEEECTTSS
T ss_pred eeeEeccc-CCceEEEEECCCCCEEEEEecC-------CeEEEEEECCcccceeeeEeecccCC----CeEEEEEcCCCC
Confidence 43221111 000112222 34433322221 267788887664 3334432221 12233332 566
Q ss_pred EEEEEeCCCCcEEEEEEeeCC-----CCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEee
Q 016367 268 LSAVHCLDDKGMEIWIMKEYK-----VRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLE 342 (390)
Q Consensus 268 L~~~~~~~~~~~~IW~l~~~~-----~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~ 342 (390)
+.+.... +..+.||-++... ....|........ +. ..+ ..... ..-+++..+|..++.
T Consensus 160 ~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~------~~~----~~~~~-v~~~~~sp~~~~l~~ 222 (377)
T 3dwl_C 160 LLAAGCA-DRKAYVLSAYVRDVDAKPEASVWGSRLPFNT-----VC------AEY----PSGGW-VHAVGFSPSGNALAY 222 (377)
T ss_dssp EEEEEES-SSCEEEEEECCSSCC-CCCSCSSCSCCCEEE-----EE------ECC----CCSSS-EEEEEECTTSSCEEE
T ss_pred EEEEEeC-CCEEEEEEEEecccCCCccccccccccchhh-----hh------hcc----cCCce-EEEEEECCCCCEEEE
Confidence 6665555 6789999985221 1112321100000 00 000 11112 555677777775555
Q ss_pred e-eCCeEEEEeCCCCcE
Q 016367 343 Y-ANGALVSYNPENEEL 358 (390)
Q Consensus 343 ~-~~~~l~~yd~~t~~~ 358 (390)
. .++.+..||+++++.
T Consensus 223 ~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 223 AGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EETTTEEC-CEECSTTS
T ss_pred EeCCCcEEEEECCCCCC
Confidence 4 466799999998875
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=87.07 E-value=17 Score=32.87 Aligned_cols=182 Identities=14% Similarity=0.023 Sum_probs=94.5
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
.+.+.|||..+++...+-.... ......+.+.|. +++-++. . . .-.+.+|+..++ .-..
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~---~~~v~~v~~s~~-~~~l~~~--~-~-------------dg~i~iwd~~~~-~~~~ 170 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDE---STYVASVKWSHD-GSFLSVG--L-G-------------NGLVDIYDVESQ-TKLR 170 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCT---TCCEEEEEECTT-SSEEEEE--E-T-------------TSCEEEEETTTC-CEEE
T ss_pred CCeEEEeeCCCCcEeEeeecCC---CCCEEEEEECCC-CCEEEEE--C-C-------------CCeEEEEECcCC-eEEE
Confidence 4789999999998765443321 123456777773 3443332 1 1 236888998887 3221
Q ss_pred cCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEe-CCeEEEEEeC
Q 016367 196 LGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL-RGCLSAVHCL 274 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~~~~~ 274 (390)
. +. .....-..+.++|.....+..+ ..|..+|+.+..-....+..+.. .-..+... +|.+.++...
T Consensus 171 ~--~~-~~~~~v~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 171 T--MA-GHQARVGCLSWNRHVLSSGSRS-------GAIHHHDVRIANHQIGTLQGHSS---EVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp E--EC-CCSSCEEEEEEETTEEEEEETT-------SEEEEEETTSSSCEEEEEECCSS---CEEEEEECTTSSEEEEEET
T ss_pred E--ec-CCCCceEEEEECCCEEEEEcCC-------CCEEEEecccCcceeeEEcCCCC---CeeEEEEcCCCCEEEEEeC
Confidence 1 11 1111123455566654444332 38899999743222222211111 12223322 5666665555
Q ss_pred CCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc-eEeeee---CCeEEE
Q 016367 275 DDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE-ILLEYA---NGALVS 350 (390)
Q Consensus 275 ~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~~~---~~~l~~ 350 (390)
+..+.||-+... .....+.. .. .. ...+.+..++. ++.... ++.+..
T Consensus 238 -d~~v~iwd~~~~------~~~~~~~~-------------~~--------~~-v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 238 -DNVVQIWDARSS------IPKFTKTN-------------HN--------AA-VKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp -TSCEEEEETTCS------SEEEEECC-------------CS--------SC-CCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred -CCeEEEccCCCC------CccEEecC-------------Cc--------ce-EEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 778999988741 12333322 00 01 44455655443 555432 567889
Q ss_pred EeCCCCcEEE
Q 016367 351 YNPENEELKD 360 (390)
Q Consensus 351 yd~~t~~~~~ 360 (390)
||+.+++...
T Consensus 289 ~d~~~~~~~~ 298 (401)
T 4aez_A 289 WNAATGARVN 298 (401)
T ss_dssp EETTTCCEEE
T ss_pred EECCCCCEEE
Confidence 9988876543
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=87.03 E-value=13 Score=31.60 Aligned_cols=203 Identities=12% Similarity=0.096 Sum_probs=104.3
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceecccCccCCC-CcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCe
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHA-QEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSD 181 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~-~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 181 (390)
+.+|-+.+.+.. ...+.++|+..+....++...... ......++++++..+..-|. .. .....
T Consensus 38 ~~~g~l~v~~~~-~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~--~~-------------~~~~~ 101 (286)
T 1q7f_A 38 NAQNDIIVADTN-NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVT--ER-------------SPTHQ 101 (286)
T ss_dssp CTTCCEEEEEGG-GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEE--EC-------------GGGCE
T ss_pred CCCCCEEEEECC-CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEE--cC-------------CCCCE
Confidence 345666555432 467999999866655555431111 11234567775433432222 11 00235
Q ss_pred EEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcce
Q 016367 182 VEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNF 259 (390)
Q Consensus 182 ~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~ 259 (390)
+.+|+ .++..-+.+... ......++.+ +|.+|...... ..|..||...+....+..+.... .-.
T Consensus 102 i~~~d-~~g~~~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~~g~~~~~~~~~~~~~---~p~ 167 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGAT---ILQHPRGVTVDNKGRIIVVECKV-------MRVIIFDQNGNVLHKFGCSKHLE---FPN 167 (286)
T ss_dssp EEEEC-TTSCEEEEECTT---TCSCEEEEEECTTSCEEEEETTT-------TEEEEECTTSCEEEEEECTTTCS---SEE
T ss_pred EEEEC-CCCcEEEEecCc---cCCCceEEEEeCCCCEEEEECCC-------CEEEEEcCCCCEEEEeCCCCccC---CcE
Confidence 77777 344122222110 0001123443 57766543321 37999998877666665432221 123
Q ss_pred EEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc
Q 016367 260 HLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE 338 (390)
Q Consensus 260 ~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (390)
.+... +|.|++.... ...+.+|-.+ + . .+..+.. .. .... ..-+++..+|.
T Consensus 168 ~i~~~~~g~l~v~~~~-~~~i~~~~~~--g---~--~~~~~~~-------------~g------~~~~-p~~i~~d~~G~ 219 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNR-AHCVKVFNYE--G---Q--YLRQIGG-------------EG------ITNY-PIGVGINSNGE 219 (286)
T ss_dssp EEEECSSSEEEEEEGG-GTEEEEEETT--C---C--EEEEESC-------------TT------TSCS-EEEEEECTTCC
T ss_pred EEEECCCCCEEEEECC-CCEEEEEcCC--C---C--EEEEEcc-------------CC------ccCC-CcEEEECCCCC
Confidence 34443 5888776654 5677777542 1 1 2233332 11 0011 44466777888
Q ss_pred eEeeeeC-C-eEEEEeCCCCcEEEEEE
Q 016367 339 ILLEYAN-G-ALVSYNPENEELKDLVI 363 (390)
Q Consensus 339 il~~~~~-~-~l~~yd~~t~~~~~v~~ 363 (390)
+++.... . .+..||.+.+.++.+..
T Consensus 220 l~v~~~~~~~~i~~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 220 ILIADNHNNFNLTIFTQDGQLISALES 246 (286)
T ss_dssp EEEEECSSSCEEEEECTTSCEEEEEEE
T ss_pred EEEEeCCCCEEEEEECCCCCEEEEEcc
Confidence 8777653 3 79999988777776654
No 42
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.29 E-value=8.1 Score=34.76 Aligned_cols=142 Identities=11% Similarity=0.034 Sum_probs=70.7
Q ss_pred eEEEEEeCCCC-cccccCCCCcc-----cCCC-CceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCC
Q 016367 181 DVEVLTVGIDH-TWRYLGPVPWR-----LNPG-ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCG 252 (390)
Q Consensus 181 ~~~vyss~~~~-~W~~~~~~p~~-----~~~~-~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~ 252 (390)
.+..|+..+++ .|+.-...... .... ..++..+|.+|.....+ .+.+||..+.+... .+++...
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g--------~l~a~d~~tG~~~W~~~~~~~~ 135 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKA--------QVYALNTSDGTVAWQTKVAGEA 135 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTS--------EEEEEETTTCCEEEEEECSSCC
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCC--------EEEEEECCCCCEEEEEeCCCce
Confidence 56666666654 56543211100 0011 33566788888765554 89999998665432 3444322
Q ss_pred CCCCcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEE
Q 016367 253 SLSVCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVC 332 (390)
Q Consensus 253 ~~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (390)
. ......+|.+++.... . .|+.++-...+..|.....-+. ... ... ..| .
T Consensus 136 ~-----~~p~~~~~~v~v~~~~--g--~l~~~d~~tG~~~W~~~~~~~~-------------~~~------~~~-~~~-~ 185 (376)
T 3q7m_A 136 L-----SRPVVSDGLVLIHTSN--G--QLQALNEADGAVKWTVNLDMPS-------------LSL------RGE-SAP-T 185 (376)
T ss_dssp C-----SCCEEETTEEEEECTT--S--EEEEEETTTCCEEEEEECCC------------------------CCC-CCC-E
T ss_pred E-----cCCEEECCEEEEEcCC--C--eEEEEECCCCcEEEEEeCCCCc-------------eee------cCC-CCc-E
Confidence 1 1223456766664332 2 4455552211446765422111 000 000 112 2
Q ss_pred EeeCCceEeeeeCCeEEEEeCCCCcEEEE
Q 016367 333 DWKNGEILLEYANGALVSYNPENEELKDL 361 (390)
Q Consensus 333 ~~~~g~il~~~~~~~l~~yd~~t~~~~~v 361 (390)
+. ++.+++-..+..++.+|+++++...-
T Consensus 186 ~~-~~~v~~g~~~g~l~~~d~~tG~~~w~ 213 (376)
T 3q7m_A 186 TA-FGAAVVGGDNGRVSAVLMEQGQMIWQ 213 (376)
T ss_dssp EE-TTEEEECCTTTEEEEEETTTCCEEEE
T ss_pred EE-CCEEEEEcCCCEEEEEECCCCcEEEE
Confidence 22 45566655567799999999886543
No 43
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.10 E-value=10 Score=34.08 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=64.2
Q ss_pred CceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCCC-----CCCcceEEEEeCCeEEEEEeCCCCcEE
Q 016367 207 ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCGS-----LSVCNFHLVVLRGCLSAVHCLDDKGME 280 (390)
Q Consensus 207 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~-----~~~~~~~L~~~~G~L~~~~~~~~~~~~ 280 (390)
..++..+|.+|.....+ .|.+||..+.+... .+++.... ...........+|.|++...+ . .
T Consensus 47 ~~p~v~~~~v~~~~~~g--------~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~--g--~ 114 (376)
T 3q7m_A 47 LHPALADNVVYAADRAG--------LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK--A--Q 114 (376)
T ss_dssp CCCEEETTEEEEECTTS--------EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT--S--E
T ss_pred eccEEECCEEEEEcCCC--------eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC--C--E
Confidence 46788999998766554 89999997654432 34432210 111234456677888875442 2 3
Q ss_pred EEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCeEEEEeCCCCcEEE
Q 016367 281 IWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGALVSYNPENEELKD 360 (390)
Q Consensus 281 IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~t~~~~~ 360 (390)
|..++-...+..|... ++- .. . ..|. + .++.+++...+..++.+|.+|++...
T Consensus 115 l~a~d~~tG~~~W~~~--~~~--------------~~--------~-~~p~-~-~~~~v~v~~~~g~l~~~d~~tG~~~W 167 (376)
T 3q7m_A 115 VYALNTSDGTVAWQTK--VAG--------------EA--------L-SRPV-V-SDGLVLIHTSNGQLQALNEADGAVKW 167 (376)
T ss_dssp EEEEETTTCCEEEEEE--CSS--------------CC--------C-SCCE-E-ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred EEEEECCCCCEEEEEe--CCC--------------ce--------E-cCCE-E-ECCEEEEEcCCCeEEEEECCCCcEEE
Confidence 4455522124567442 121 00 0 1222 2 25556666667779999999887654
Q ss_pred E
Q 016367 361 L 361 (390)
Q Consensus 361 v 361 (390)
-
T Consensus 168 ~ 168 (376)
T 3q7m_A 168 T 168 (376)
T ss_dssp E
T ss_pred E
Confidence 3
No 44
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=85.18 E-value=20 Score=31.95 Aligned_cols=179 Identities=8% Similarity=0.005 Sum_probs=94.8
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+.++|+.+++....-.... ...++.+++.. ++-++. . . ....+.+++..++ ....
T Consensus 95 ~~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg-~~l~~~-~--~------------~~~~v~~~d~~~~-~~~~ 152 (391)
T 1l0q_A 95 SSTLSVIDTTSNTVAGTVKTGK-----SPLGLALSPDG-KKLYVT-N--N------------GDKTVSVINTVTK-AVIN 152 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTS-SEEEEE-E--T------------TTTEEEEEETTTT-EEEE
T ss_pred CCEEEEEECCCCeEEEEEeCCC-----CcceEEECCCC-CEEEEE-e--C------------CCCEEEEEECCCC-cEEE
Confidence 4689999999988654432211 23467777653 332222 1 1 1347888998887 5433
Q ss_pred cCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEe-CCe-EEE
Q 016367 196 LGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVL-RGC-LSA 270 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~-~G~-L~~ 270 (390)
.-.. ... ...+.+ +|...|+.... ...|..+|+.+.+.... .... ....+... +|+ |++
T Consensus 153 ~~~~--~~~--~~~~~~~~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~ 216 (391)
T 1l0q_A 153 TVSV--GRS--PKGIAVTPDGTKVYVANFD------SMSISVIDTVTNSVIDTVKVEA------APSGIAVNPEGTKAYV 216 (391)
T ss_dssp EEEC--CSS--EEEEEECTTSSEEEEEETT------TTEEEEEETTTTEEEEEEECSS------EEEEEEECTTSSEEEE
T ss_pred EEec--CCC--cceEEECCCCCEEEEEeCC------CCEEEEEECCCCeEEEEEecCC------CccceEECCCCCEEEE
Confidence 2111 100 112222 45544443322 13789999988765433 3221 11223322 454 444
Q ss_pred EEeC-CCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceE-eee-eCCe
Q 016367 271 VHCL-DDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEIL-LEY-ANGA 347 (390)
Q Consensus 271 ~~~~-~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il-~~~-~~~~ 347 (390)
.... ....+.+|-++. ...+..+.. .. . ..-+.+..+|+.+ +.. .++.
T Consensus 217 ~~~~~~~~~v~~~d~~~------~~~~~~~~~-------------~~---------~-~~~~~~s~dg~~l~~s~~~d~~ 267 (391)
T 1l0q_A 217 TNVDKYFNTVSMIDTGT------NKITARIPV-------------GP---------D-PAGIAVTPDGKKVYVALSFXNT 267 (391)
T ss_dssp EEECSSCCEEEEEETTT------TEEEEEEEC-------------CS---------S-EEEEEECTTSSEEEEEETTTTE
T ss_pred EecCcCCCcEEEEECCC------CeEEEEEec-------------CC---------C-ccEEEEccCCCEEEEEcCCCCE
Confidence 4331 267888887752 233444443 11 1 3345666777654 443 3667
Q ss_pred EEEEeCCCCcEEEE
Q 016367 348 LVSYNPENEELKDL 361 (390)
Q Consensus 348 l~~yd~~t~~~~~v 361 (390)
+..||+++++....
T Consensus 268 v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 268 VSVIDTATNTITAT 281 (391)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEECCCCcEEEE
Confidence 99999999877554
No 45
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=84.99 E-value=19 Score=31.34 Aligned_cols=197 Identities=12% Similarity=-0.034 Sum_probs=97.7
Q ss_pred cccEEEEcC-CCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCC--c
Q 016367 116 FNPIIVCNP-FTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDH--T 192 (390)
Q Consensus 116 ~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~--~ 192 (390)
...+.+||. .+++...+..... ......+.+.+ +++-+.+ . . ...+.+|+.++.+ .
T Consensus 78 dg~i~~wd~~~~~~~~~~~~~~~---~~~v~~l~~~~--~~~l~s~-~--~-------------d~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 78 QGEILKVDLIGSPSFQALTNNEA---NLGICRICKYG--DDKLIAA-S--W-------------DGLIEVIDPRNYGDGV 136 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCC---CSCEEEEEEET--TTEEEEE-E--T-------------TSEEEEECHHHHTTBC
T ss_pred CCeEEEEEeccCCceEeccccCC---CCceEEEEeCC--CCEEEEE-c--C-------------CCeEEEEccccccccc
Confidence 578999999 8888766654101 11344677777 4443332 1 1 2467777776510 0
Q ss_pred ----ccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCC-c--eeeeecCCCCCCCCCcceEEEEe-
Q 016367 193 ----WRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAE-E--DFGEIGLPDCGSLSVCNFHLVVL- 264 (390)
Q Consensus 193 ----W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~-e--~~~~i~lP~~~~~~~~~~~L~~~- 264 (390)
.+.+.... ....-.++.+++.....+... ..|..+|+.+ . .......+... ....+...
T Consensus 137 ~~~~~~~~~~~~--~~~~v~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~----~i~~i~~~~ 203 (342)
T 1yfq_A 137 IAVKNLNSNNTK--VKNKIFTMDTNSSRLIVGMNN-------SQVQWFRLPLCEDDNGTIEESGLKY----QIRDVALLP 203 (342)
T ss_dssp EEEEESCSSSSS--SCCCEEEEEECSSEEEEEEST-------TEEEEEESSCCTTCCCEEEECSCSS----CEEEEEECS
T ss_pred ccccCCeeeEEe--eCCceEEEEecCCcEEEEeCC-------CeEEEEECCccccccceeeecCCCC----ceeEEEECC
Confidence 22222211 111112344443332222211 2789999987 3 23333333222 22334444
Q ss_pred -CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeee
Q 016367 265 -RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY 343 (390)
Q Consensus 265 -~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~ 343 (390)
+|.+.++... ...+.||.++..+..........+... ............ +..+++..++..++..
T Consensus 204 ~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 204 KEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFRCH------------RLNLKDTNLAYP-VNSIEFSPRHKFLYTA 269 (342)
T ss_dssp GGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEECC------------CCCTTCCSSCCC-EEEEEECTTTCCEEEE
T ss_pred CCCCEEEEEec-CCcEEEEEEcCCCcccccccceeeecc------------ccccccccccee-EEEEEEcCCCCEEEEe
Confidence 5676666665 789999998754111111122222220 000000001112 5566777777765554
Q ss_pred e-CCeEEEEeCCCCcEEE
Q 016367 344 A-NGALVSYNPENEELKD 360 (390)
Q Consensus 344 ~-~~~l~~yd~~t~~~~~ 360 (390)
. ++.+..||+++++...
T Consensus 270 ~~dg~i~vwd~~~~~~~~ 287 (342)
T 1yfq_A 270 GSDGIISCWNLQTRKKIK 287 (342)
T ss_dssp ETTSCEEEEETTTTEEEE
T ss_pred cCCceEEEEcCccHhHhh
Confidence 4 6679999999887543
No 46
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=82.96 E-value=22 Score=32.61 Aligned_cols=111 Identities=11% Similarity=0.018 Sum_probs=67.6
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeee---cC-------CCCCCCCCcceEEEE--eCCeEEEEEeC------
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI---GL-------PDCGSLSVCNFHLVV--LRGCLSAVHCL------ 274 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i---~l-------P~~~~~~~~~~~L~~--~~G~L~~~~~~------ 274 (390)
+|.++|....+ .+.++|+.++....+ .+ +..... ....++. -+++|++....
T Consensus 237 dG~~~~vs~~g--------~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~--g~q~~a~~~~~~~lyV~~~~~~~~~h 306 (386)
T 3sjl_D 237 AGRLVWPTYTG--------KIHQIDLSSGDAKFLPAVEALTEAERADGWRPG--GWQQVAYHRALDRIYLLVDQRDEWRH 306 (386)
T ss_dssp TTEEEEEBTTS--------EEEEEECTTSSCEECCCEESSCHHHHHTTEEEC--SSSCEEEETTTTEEEEEEEECCTTCT
T ss_pred CCcEEEEeCCC--------EEEEEECCCCcceeecceeccccccccccccCC--CcceeeECCCCCeEEEEecccccccc
Confidence 78899987765 899999988764433 10 111111 1112233 24678884321
Q ss_pred CCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc-eEee-ee-CCeEEEE
Q 016367 275 DDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE-ILLE-YA-NGALVSY 351 (390)
Q Consensus 275 ~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~-~~-~~~l~~y 351 (390)
....=+||+++ ...+..+.+|+. ..- ...+.+..++. .++. +. ++.+..|
T Consensus 307 k~~~~~V~viD----~~t~kv~~~i~v-------------g~~----------~~~lavs~D~~~~ly~tn~~~~~VsVi 359 (386)
T 3sjl_D 307 KTASRFVVVLD----AKTGERLAKFEM-------------GHE----------IDSINVSQDEKPLLYALSTGDKTLYIH 359 (386)
T ss_dssp TSCEEEEEEEE----TTTCCEEEEEEE-------------EEE----------ECEEEECSSSSCEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEE----CCCCeEEEEEEC-------------CCC----------cceEEECCCCCeEEEEEcCCCCeEEEE
Confidence 12356899998 446778888887 211 33467777775 4444 33 5679999
Q ss_pred eCCCCcEEE
Q 016367 352 NPENEELKD 360 (390)
Q Consensus 352 d~~t~~~~~ 360 (390)
|..|++..+
T Consensus 360 D~~t~k~~~ 368 (386)
T 3sjl_D 360 DAESGEELR 368 (386)
T ss_dssp ETTTCCEEE
T ss_pred ECCCCcEEE
Confidence 999988643
No 47
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=82.30 E-value=27 Score=31.12 Aligned_cols=210 Identities=7% Similarity=-0.021 Sum_probs=94.0
Q ss_pred cCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEE
Q 016367 104 CNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVE 183 (390)
Q Consensus 104 ~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 183 (390)
-+|-++.... ...+.|||..+++..................+.+.|.. ++-+.+ . . .-.+.
T Consensus 104 ~d~~~l~~s~--dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sg-s--~-------------dg~v~ 164 (357)
T 4g56_B 104 SEKGILVASD--SGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSG-G--K-------------DFSVK 164 (357)
T ss_dssp TTTEEEEEET--TSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEE-E--T-------------TSCEE
T ss_pred CCCCEEEEEC--CCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEE-e--C-------------CCeEE
Confidence 3454444444 57899999999876544433211111234567777643 332222 1 1 24588
Q ss_pred EEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCCCCCCcceE
Q 016367 184 VLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCGSLSVCNFH 260 (390)
Q Consensus 184 vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~ 260 (390)
+++..++ .-... +. .....-.++.+ +|.-+.+.... ...|..+|+.+.+... +....... ....
T Consensus 165 iwd~~~~-~~~~~--~~-~h~~~v~~v~~s~~~~~~~~s~~~------dg~v~~wd~~~~~~~~~~~~~~~~~---~v~~ 231 (357)
T 4g56_B 165 VWDLSQK-AVLKS--YN-AHSSEVNCVAACPGKDTIFLSCGE------DGRILLWDTRKPKPATRIDFCASDT---IPTS 231 (357)
T ss_dssp EEETTTT-EEEEE--EC-CCSSCEEEEEECTTCSSCEEEEET------TSCEEECCTTSSSCBCBCCCTTCCS---CEEE
T ss_pred EEECCCC-cEEEE--Ec-CCCCCEEEEEEccCCCceeeeecc------CCceEEEECCCCceeeeeeeccccc---cccc
Confidence 8888877 32211 00 00000112222 23222222211 1267788887654322 22222211 1122
Q ss_pred EEEe--CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC-
Q 016367 261 LVVL--RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG- 337 (390)
Q Consensus 261 L~~~--~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g- 337 (390)
+.-. ++.+.++... ...+.||-++... ....+.. . ... +.-+++..++
T Consensus 232 v~~sp~~~~~la~g~~-d~~i~~wd~~~~~------~~~~~~~-------------~--------~~~-v~~l~~sp~~~ 282 (357)
T 4g56_B 232 VTWHPEKDDTFACGDE-TGNVSLVNIKNPD------SAQTSAV-------------H--------SQN-ITGLAYSYHSS 282 (357)
T ss_dssp EEECTTSTTEEEEEES-SSCEEEEESSCGG------GCEEECC-------------C--------SSC-EEEEEECSSSS
T ss_pred hhhhhcccceEEEeec-ccceeEEECCCCc------EeEEEec-------------c--------cee-EEEEEEcCCCC
Confidence 2222 3566665555 7789999876321 1222222 0 111 5556666655
Q ss_pred ceEeee-eCCeEEEEeCCCCcEEEEEEeCCCCceEEEeee
Q 016367 338 EILLEY-ANGALVSYNPENEELKDLVIFDPPKWFCSIVHV 376 (390)
Q Consensus 338 ~il~~~-~~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~ 376 (390)
.++... .++.+..||.+++++... .+.......+.+.
T Consensus 283 ~~lasgs~D~~i~iwd~~~~~~~~~--~~H~~~V~~vafs 320 (357)
T 4g56_B 283 PFLASISEDCTVAVLDADFSEVFRD--LSHRDFVTGVAWS 320 (357)
T ss_dssp CCEEEEETTSCEEEECTTSCEEEEE--CCCSSCEEEEEEC
T ss_pred CEEEEEeCCCEEEEEECCCCcEeEE--CCCCCCEEEEEEe
Confidence 455443 456799999998876543 2333334444443
No 48
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=82.07 E-value=24 Score=30.48 Aligned_cols=143 Identities=8% Similarity=0.029 Sum_probs=70.4
Q ss_pred CeEEEEEeC--CCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCc-eee---eecCCCC
Q 016367 180 SDVEVLTVG--IDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEE-DFG---EIGLPDC 251 (390)
Q Consensus 180 ~~~~vyss~--~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e-~~~---~i~lP~~ 251 (390)
..+.+|+.. ++ .++.+...+.... ...+.+ +|...+..... ...|..+|+.+. ... .++....
T Consensus 60 ~~v~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~ 130 (343)
T 1ri6_A 60 FRVLAYRIAPDDG-ALTFAAESALPGS--LTHISTDHQGQFVFVGSYN------AGNVSVTRLEDGLPVGVVDVVEGLDG 130 (343)
T ss_dssp TEEEEEEECTTTC-CEEEEEEEECSSC--CSEEEECTTSSEEEEEETT------TTEEEEEEEETTEEEEEEEEECCCTT
T ss_pred CeEEEEEecCCCC-ceeeccccccCCC--CcEEEEcCCCCEEEEEecC------CCeEEEEECCCCccccccccccCCCC
Confidence 478888887 77 7776543322111 122333 56633333321 126777887322 222 2222221
Q ss_pred CCCCCcceEEEEeCCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEEE--EEccCCCcccccCcCcchhhhhccCCCCcce
Q 016367 252 GSLSVCNFHLVVLRGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDY--IIGTYLPASLRENARPHLEMLKKSGLGRGSS 328 (390)
Q Consensus 252 ~~~~~~~~~L~~~~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (390)
. .... ..-+|+ |++.... ...+.+|-++.. ....... .+.. . .+.. .
T Consensus 131 ~----~~~~-~s~dg~~l~~~~~~-~~~v~~~d~~~~---~~~~~~~~~~~~~-------------~-------~~~~-~ 180 (343)
T 1ri6_A 131 C----HSAN-ISPDNRTLWVPALK-QDRICLFTVSDD---GHLVAQDPAEVTT-------------V-------EGAG-P 180 (343)
T ss_dssp B----CCCE-ECTTSSEEEEEEGG-GTEEEEEEECTT---SCEEEEEEEEEEC-------------S-------TTCC-E
T ss_pred c----eEEE-ECCCCCEEEEecCC-CCEEEEEEecCC---Cceeeeccccccc-------------C-------CCCC-c
Confidence 1 1111 223454 5444434 678999998742 3444443 3332 1 0111 4
Q ss_pred EEEEEeeCCce-Eeee-eCCeEEEEeCC--CCcEEEE
Q 016367 329 QVVCDWKNGEI-LLEY-ANGALVSYNPE--NEELKDL 361 (390)
Q Consensus 329 ~~~~~~~~g~i-l~~~-~~~~l~~yd~~--t~~~~~v 361 (390)
.-+.+..+|+. ++.. .+..+..||++ +++++.+
T Consensus 181 ~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~ 217 (343)
T 1ri6_A 181 RHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECV 217 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE
Confidence 44567777774 4444 35678999984 4555443
No 49
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=81.93 E-value=24 Score=30.39 Aligned_cols=206 Identities=10% Similarity=0.001 Sum_probs=101.5
Q ss_pred eecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCe
Q 016367 102 GSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSD 181 (390)
Q Consensus 102 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 181 (390)
+..+|-|.+.+.. ...++.++|.|++...+.... ...++++++..+ + ++. . . ..
T Consensus 21 ~~~~~~l~~~d~~-~~~i~~~d~~~~~~~~~~~~~------~~~~i~~~~dG~-l-~v~--~-~--------------~~ 74 (297)
T 3g4e_A 21 EEVSNSLLFVDIP-AKKVCRWDSFTKQVQRVTMDA------PVSSVALRQSGG-Y-VAT--I-G--------------TK 74 (297)
T ss_dssp ETTTTEEEEEETT-TTEEEEEETTTCCEEEEECSS------CEEEEEEBTTSS-E-EEE--E-T--------------TE
T ss_pred ECCCCEEEEEECC-CCEEEEEECCCCcEEEEeCCC------ceEEEEECCCCC-E-EEE--E-C--------------Ce
Confidence 3435555555532 467999999998765543321 234677777544 2 222 1 1 36
Q ss_pred EEEEEeCCCCcccccCCCCcccCC-CCceEEE--CCcEEEEEeeccC----CCCCceEEEEEECCCceeeeecCCCCCCC
Q 016367 182 VEVLTVGIDHTWRYLGPVPWRLNP-GASEALL--NGSLHWVTMRYKN----NPGPRLRIMSFDLAEEDFGEIGLPDCGSL 254 (390)
Q Consensus 182 ~~vyss~~~~~W~~~~~~p~~~~~-~~~~v~~--~G~lywl~~~~~~----~~~~~~~il~fD~~~e~~~~i~lP~~~~~ 254 (390)
+.+|+..++ .++.+...+..... ....+.+ +|.+|+-...... .......|..+|.....-.... ...
T Consensus 75 l~~~d~~~g-~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~---~~~- 149 (297)
T 3g4e_A 75 FCALNWKEQ-SAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD---QVD- 149 (297)
T ss_dssp EEEEETTTT-EEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE---EES-
T ss_pred EEEEECCCC-cEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee---ccc-
Confidence 888898888 87765432211111 0122333 5886543332100 0012247888887643222111 000
Q ss_pred CCcceEEEEe-CCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEEEEE-ccCCCcccccCcCcchhhhhccCCCCcceEEE
Q 016367 255 SVCNFHLVVL-RGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDYII-GTYLPASLRENARPHLEMLKKSGLGRGSSQVV 331 (390)
Q Consensus 255 ~~~~~~L~~~-~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (390)
...-+... +|+ |+++... ...|.+|-++.. +........+ .+ ... ... ..-+
T Consensus 150 --~pngi~~spdg~~lyv~~~~-~~~i~~~~~d~~--~G~~~~~~~~~~~-------------~~~------~~~-p~g~ 204 (297)
T 3g4e_A 150 --ISNGLDWSLDHKIFYYIDSL-SYSVDAFDYDLQ--TGQISNRRSVYKL-------------EKE------EQI-PDGM 204 (297)
T ss_dssp --BEEEEEECTTSCEEEEEEGG-GTEEEEEEECTT--TCCEEEEEEEEEC-------------CGG------GCE-EEEE
T ss_pred --cccceEEcCCCCEEEEecCC-CCcEEEEeccCC--CCcccCcEEEEEC-------------CCC------CCC-CCee
Confidence 11122222 454 6666554 555555555311 2233221111 11 100 001 3345
Q ss_pred EEeeCCceEeeee-CCeEEEEeCCCCcE-EEEEE
Q 016367 332 CDWKNGEILLEYA-NGALVSYNPENEEL-KDLVI 363 (390)
Q Consensus 332 ~~~~~g~il~~~~-~~~l~~yd~~t~~~-~~v~~ 363 (390)
++..+|.|++... ...+..||++++++ ..+..
T Consensus 205 ~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 205 CIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp EEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred EECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 6667788877764 45699999997765 44444
No 50
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=81.46 E-value=25 Score=30.12 Aligned_cols=192 Identities=10% Similarity=-0.013 Sum_probs=97.9
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...++.+||.++ ...+..... ...++.+++.. . ++... . ....+.+|+..++ ..+.
T Consensus 49 ~~~i~~~~~~~~-~~~~~~~~~-----~~~~l~~~~dg-~--l~v~~--~------------~~~~i~~~d~~~g-~~~~ 104 (296)
T 3e5z_A 49 QNRTWAWSDDGQ-LSPEMHPSH-----HQNGHCLNKQG-H--LIACS--H------------GLRRLERQREPGG-EWES 104 (296)
T ss_dssp GTEEEEEETTSC-EEEEESSCS-----SEEEEEECTTC-C--EEEEE--T------------TTTEEEEECSTTC-CEEE
T ss_pred CCEEEEEECCCC-eEEEECCCC-----CcceeeECCCC-c--EEEEe--c------------CCCeEEEEcCCCC-cEEE
Confidence 467999999998 555443221 24577888743 2 22211 1 1246888888888 7665
Q ss_pred cCCCCccc-CCCCceEEE--CCcEEEEEee-cc---------CCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEE
Q 016367 196 LGPVPWRL-NPGASEALL--NGSLHWVTMR-YK---------NNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLV 262 (390)
Q Consensus 196 ~~~~p~~~-~~~~~~v~~--~G~lywl~~~-~~---------~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~ 262 (390)
+....... ......+.+ +|.+|..... +. ........|..+|.. .++..+.-... ....+.
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~-----~~~gi~ 178 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV-----KPNGLA 178 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS-----SEEEEE
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC-----CCccEE
Confidence 43211111 111122333 5776653210 00 000012378899987 55544421111 111233
Q ss_pred E-eCCeEEEEEeCCCCcEEEEEEeeCCCCCce-EEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceE
Q 016367 263 V-LRGCLSAVHCLDDKGMEIWIMKEYKVRESW-SKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEIL 340 (390)
Q Consensus 263 ~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il 340 (390)
. -+|++.+.... ...+.+|-++.. ... .....+.. . .. . ..-+++..+|.++
T Consensus 179 ~s~dg~~lv~~~~-~~~i~~~~~~~~---g~~~~~~~~~~~--~----------~~---------~-p~~i~~d~~G~l~ 232 (296)
T 3e5z_A 179 FLPSGNLLVSDTG-DNATHRYCLNAR---GETEYQGVHFTV--E----------PG---------K-TDGLRVDAGGLIW 232 (296)
T ss_dssp ECTTSCEEEEETT-TTEEEEEEECSS---SCEEEEEEEECC--S----------SS---------C-CCSEEEBTTSCEE
T ss_pred ECCCCCEEEEeCC-CCeEEEEEECCC---CcCcCCCeEeeC--C----------CC---------C-CCeEEECCCCCEE
Confidence 3 35665554443 567777777632 233 22222211 0 00 0 2224677788877
Q ss_pred eeeeCCeEEEEeCCCCcEEEEEEe
Q 016367 341 LEYANGALVSYNPENEELKDLVIF 364 (390)
Q Consensus 341 ~~~~~~~l~~yd~~t~~~~~v~~~ 364 (390)
+.. ...+..||++.+.++.+...
T Consensus 233 v~~-~~~v~~~~~~g~~~~~~~~~ 255 (296)
T 3e5z_A 233 ASA-GDGVHVLTPDGDELGRVLTP 255 (296)
T ss_dssp EEE-TTEEEEECTTSCEEEEEECS
T ss_pred EEc-CCeEEEECCCCCEEEEEECC
Confidence 777 77799999987776766543
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=81.13 E-value=28 Score=30.56 Aligned_cols=68 Identities=9% Similarity=-0.077 Sum_probs=43.4
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA 344 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~ 344 (390)
+|.+.++... +..+.+|-++.. ..+..+.. ... . ..-+.+..++.++....
T Consensus 213 ~~~~l~~~~~-d~~i~i~d~~~~------~~~~~~~~-------------~~~--------~-v~~~~~~~~~~~l~~~~ 263 (372)
T 1k8k_C 213 NGSRVAWVSH-DSTVCLADADKK------MAVATLAS-------------ETL--------P-LLAVTFITESSLVAAGH 263 (372)
T ss_dssp SSSEEEEEET-TTEEEEEEGGGT------TEEEEEEC-------------SSC--------C-EEEEEEEETTEEEEEET
T ss_pred CCCEEEEEeC-CCEEEEEECCCC------ceeEEEcc-------------CCC--------C-eEEEEEecCCCEEEEEe
Confidence 5555555554 778999988742 13344433 110 1 55566777888777777
Q ss_pred CCeEEEEeCCC--CcEEEE
Q 016367 345 NGALVSYNPEN--EELKDL 361 (390)
Q Consensus 345 ~~~l~~yd~~t--~~~~~v 361 (390)
++.+..||+.+ ++|..+
T Consensus 264 d~~i~i~~~~~~~~~~~~~ 282 (372)
T 1k8k_C 264 DCFPVLFTYDSAAGKLSFG 282 (372)
T ss_dssp TSSCEEEEEETTTTEEEEC
T ss_pred CCeEEEEEccCcCceEEEe
Confidence 77899999988 765543
No 52
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=81.04 E-value=50 Score=33.44 Aligned_cols=157 Identities=12% Similarity=-0.054 Sum_probs=80.3
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSV 256 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 256 (390)
..++++++... .-+.+.. ..+ ....++.+ +|.|||..... ...|..+++.......+-. ....
T Consensus 493 ~~I~v~~ldG~-~~~~l~~--~~l-~~P~gIaVDp~~g~LYwtD~g~------~~~I~~~~~dG~~~~~lv~-~~l~--- 558 (791)
T 3m0c_C 493 GTVSVADTKGV-KRKTLFR--ENG-SKPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVDIYSLVT-ENIQ--- 558 (791)
T ss_dssp TEEEEEETTSS-SEEEEEE--CTT-CCEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCCEEEEEC-SSCS---
T ss_pred CeEEEEeCCCC-eEEEEEe--CCC-CCcceEEEecCCCCEEEecCCC------CCeEEEEecCCCceEEEEe-CCCC---
Confidence 47888888755 4333311 011 11235555 58999986542 1379999998765544421 1110
Q ss_pred cceEEEE--eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEe
Q 016367 257 CNFHLVV--LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDW 334 (390)
Q Consensus 257 ~~~~L~~--~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
.-.-|++ .+|.||++... .. .||+..-.+ ....... .. . ..+ ..|+++.
T Consensus 559 ~P~GLavD~~~~~LYwaD~~-~~--~I~~~d~dG-~~~~~v~---~~-------------~--------~~l-~~P~gla 609 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSK-LH--SISSIDVNG-GNRKTIL---ED-------------E--------KRL-AHPFSLA 609 (791)
T ss_dssp CEEEEEEETTTTEEEEEETT-TT--EEEEEETTS-CSCEEEE---EC-------------T--------TTT-SSEEEEE
T ss_pred CceEEEEecCCCeEEEEeCC-CC--cEEEEecCC-CceEEEe---cC-------------C--------Ccc-CCCCEEE
Confidence 1222333 47889988654 33 566665333 2222211 11 0 011 3344443
Q ss_pred e-CCceEeeee-CCeEEEEeCCCCcEEEEEEeCCCCceEEEeeeccc
Q 016367 335 K-NGEILLEYA-NGALVSYNPENEELKDLVIFDPPKWFCSIVHVESL 379 (390)
Q Consensus 335 ~-~g~il~~~~-~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~~sL 379 (390)
- ++.|++... ...|..+|..+++-..+-..+...-+.+.+|.+..
T Consensus 610 v~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~ 656 (791)
T 3m0c_C 610 VFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLT 656 (791)
T ss_dssp EETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGG
T ss_pred EeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeecccc
Confidence 2 344665543 45788999877765444344443445556665543
No 53
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=80.49 E-value=30 Score=30.51 Aligned_cols=159 Identities=12% Similarity=0.107 Sum_probs=79.0
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCC
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSV 256 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~ 256 (390)
..+.+++..++ .|........+....-..+.+ +|.+...+..+ ..+..+|..+..+..+ .+..+..
T Consensus 38 ~~i~iw~~~~~-~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-------~~v~iw~~~~~~~~~~~~~~~h~~--- 106 (345)
T 3fm0_A 38 RRIRIWGTEGD-SWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-------ATTCIWKKNQDDFECVTTLEGHEN--- 106 (345)
T ss_dssp SCEEEEEEETT-EEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-------SCEEEEEECCC-EEEEEEECCCSS---
T ss_pred CeEEEEEcCCC-cceeeeeeccccCCcEEEEEECCCCCEEEEEECC-------CcEEEEEccCCCeEEEEEccCCCC---
Confidence 46888888888 775322111111111112222 34432222211 2566777776655433 3332221
Q ss_pred cceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee
Q 016367 257 CNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK 335 (390)
Q Consensus 257 ~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
.-..+... +|.+.+.... +..+.||-++.. ..+.....+.. .. .. +.-+.+.+
T Consensus 107 ~v~~v~~sp~~~~l~s~s~-D~~v~iwd~~~~---~~~~~~~~~~~-------------h~--------~~-v~~~~~~p 160 (345)
T 3fm0_A 107 EVKSVAWAPSGNLLATCSR-DKSVWVWEVDEE---DEYECVSVLNS-------------HT--------QD-VKHVVWHP 160 (345)
T ss_dssp CEEEEEECTTSSEEEEEET-TSCEEEEEECTT---SCEEEEEEECC-------------CC--------SC-EEEEEECS
T ss_pred CceEEEEeCCCCEEEEEEC-CCeEEEEECCCC---CCeEEEEEecC-------------cC--------CC-eEEEEECC
Confidence 12233332 5666665554 778999999742 23444444432 11 11 55556667
Q ss_pred CCceEeeee-CCeEEEEeCCCCcEEEE-EEeCCCCceEEEee
Q 016367 336 NGEILLEYA-NGALVSYNPENEELKDL-VIFDPPKWFCSIVH 375 (390)
Q Consensus 336 ~g~il~~~~-~~~l~~yd~~t~~~~~v-~~~~~~~~~~~~~y 375 (390)
++.+++... ++.+..||.+++++..+ .+.+.......+.+
T Consensus 161 ~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~ 202 (345)
T 3fm0_A 161 SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202 (345)
T ss_dssp SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEE
Confidence 777655543 56688888888766543 34433333333333
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=79.58 E-value=29 Score=29.81 Aligned_cols=195 Identities=9% Similarity=-0.052 Sum_probs=97.2
Q ss_pred cCceEEeeeccccccEEEEcCCCcceecc-cCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 104 CNGLLCVSDALYFNPIIVCNPFTGSYLEL-AKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 104 ~~GLl~~~~~~~~~~~~V~NP~T~~~~~L-P~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
.+|-+++... .+.+.|||..+++.... ..............+.+.|.. ++-++. . . .-.+
T Consensus 61 ~~~~~l~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~--~-~-------------d~~i 121 (337)
T 1gxr_A 61 NPTRHVYTGG--KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVG--G-E-------------ASTL 121 (337)
T ss_dssp SSSSEEEEEC--BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTS-SEEEEE--E-S-------------SSEE
T ss_pred cCCcEEEEcC--CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCC-CEEEEE--c-C-------------CCcE
Confidence 3454444444 47788999887653221 111111111235567777743 333222 1 1 2478
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCCCCCCcce
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCGSLSVCNF 259 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~ 259 (390)
.+|+..++ ..+.......... .-..+.+ +|.....+... ..|..+|+.+.+... +..... ...
T Consensus 122 ~~~d~~~~-~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~~~~~~-----~i~ 187 (337)
T 1gxr_A 122 SIWDLAAP-TPRIKAELTSSAP-ACYALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQFQGHTD-----GAS 187 (337)
T ss_dssp EEEECCCC---EEEEEEECSSS-CEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSS-----CEE
T ss_pred EEEECCCC-CcceeeecccCCC-ceEEEEECCCCCEEEEEeCC-------CcEEEEeCCCCceeeeeecccC-----ceE
Confidence 89999888 6443322111110 0112222 45444333322 268889998765433 332211 122
Q ss_pred EEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc
Q 016367 260 HLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE 338 (390)
Q Consensus 260 ~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (390)
.+... +|...++... ...+.+|-++.. .....+.. .. . ..-+.+..++.
T Consensus 188 ~~~~~~~~~~l~~~~~-dg~i~~~d~~~~------~~~~~~~~-------------~~---------~-v~~~~~s~~~~ 237 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGL-DNTVRSWDLREG------RQLQQHDF-------------TS---------Q-IFSLGYCPTGE 237 (337)
T ss_dssp EEEECTTSSEEEEEET-TSEEEEEETTTT------EEEEEEEC-------------SS---------C-EEEEEECTTSS
T ss_pred EEEECCCCCEEEEEec-CCcEEEEECCCC------ceEeeecC-------------CC---------c-eEEEEECCCCC
Confidence 33333 5666565444 778999977631 23333333 11 1 44456666776
Q ss_pred eEeee-eCCeEEEEeCCCCcEEEE
Q 016367 339 ILLEY-ANGALVSYNPENEELKDL 361 (390)
Q Consensus 339 il~~~-~~~~l~~yd~~t~~~~~v 361 (390)
.++.. .++.+..||+++++...+
T Consensus 238 ~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 238 WLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp EEEEEETTSCEEEEETTSSCEEEE
T ss_pred EEEEEcCCCcEEEEECCCCCeEEE
Confidence 55554 456789999988876543
No 55
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=79.36 E-value=31 Score=30.01 Aligned_cols=203 Identities=9% Similarity=-0.012 Sum_probs=101.4
Q ss_pred EeecCceEEeeeccccccEEEEcCCCccee-cccCccCC----CCcceEEEEEEecCCCCeEEEEEEEeccccccccCCC
Q 016367 101 VGSCNGLLCVSDALYFNPIIVCNPFTGSYL-ELAKATQH----AQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRG 175 (390)
Q Consensus 101 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~----~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~ 175 (390)
++..+..+.+.... ...+.++|+.|++.. .++..... .......++.+++..+ +-++. ..
T Consensus 96 ~s~dg~~l~v~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~-~~------------ 160 (353)
T 3vgz_A 96 INNTTQTLWFGNTV-NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN-TVYIS-GI------------ 160 (353)
T ss_dssp EETTTTEEEEEETT-TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT-EEEEE-EE------------
T ss_pred ECCCCCEEEEEecC-CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC-EEEEE-ec------------
Confidence 33444445444432 468999999998853 34332111 0011244678887644 32222 11
Q ss_pred CCCCCeEEEEEeCCCCcccccCCCC-cccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceee-eecCCCCCC
Q 016367 176 WPRKSDVEVLTVGIDHTWRYLGPVP-WRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFG-EIGLPDCGS 253 (390)
Q Consensus 176 ~~~~~~~~vyss~~~~~W~~~~~~p-~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~ 253 (390)
.....+.+++..++ .=.. ..+ .......-.+.-+|...+..... ..|..+|+.+.+.. .++.+....
T Consensus 161 -~~~~~i~~~d~~~~-~~~~--~~~~~~~~~~~~~~s~dg~~l~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~ 229 (353)
T 3vgz_A 161 -GKESVIWVVDGGNI-KLKT--AIQNTGKMSTGLALDSEGKRLYTTNAD-------GELITIDTADNKILSRKKLLDDGK 229 (353)
T ss_dssp -SSSCEEEEEETTTT-EEEE--EECCCCTTCCCCEEETTTTEEEEECTT-------SEEEEEETTTTEEEEEEECCCSSS
T ss_pred -CCCceEEEEcCCCC-ceEE--EecCCCCccceEEECCCCCEEEEEcCC-------CeEEEEECCCCeEEEEEEcCCCCC
Confidence 11346888888877 3211 111 11111122333366644444322 27889999887664 345433211
Q ss_pred CCCcceEEEEe-CCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEE
Q 016367 254 LSVCNFHLVVL-RGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVV 331 (390)
Q Consensus 254 ~~~~~~~L~~~-~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (390)
.. ....+... +|+ |++.... ...+.+|-++. ......+.. .. . . -+
T Consensus 230 ~~-~~~~~~~s~dg~~l~~~~~~-~~~v~~~d~~~------~~~~~~~~~-------------~~-------~---~-~~ 277 (353)
T 3vgz_A 230 EH-FFINISLDTARQRAFITDSK-AAEVLVVDTRN------GNILAKVAA-------------PE-------S---L-AV 277 (353)
T ss_dssp CC-CEEEEEEETTTTEEEEEESS-SSEEEEEETTT------CCEEEEEEC-------------SS-------C---C-CE
T ss_pred Cc-ccceEEECCCCCEEEEEeCC-CCEEEEEECCC------CcEEEEEEc-------------CC-------C---c-eE
Confidence 10 12223333 454 5555443 56777776542 223344443 11 0 1 13
Q ss_pred EEeeCCc-eEeee-eCCeEEEEeCCCCcEEEE
Q 016367 332 CDWKNGE-ILLEY-ANGALVSYNPENEELKDL 361 (390)
Q Consensus 332 ~~~~~g~-il~~~-~~~~l~~yd~~t~~~~~v 361 (390)
.+..+|+ +++.. .+..+..||.++++....
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKT 309 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCeEEEE
Confidence 5666776 55544 356799999998876543
No 56
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=78.89 E-value=22 Score=32.68 Aligned_cols=112 Identities=11% Similarity=0.085 Sum_probs=60.7
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEe-CC-eEEEEEeCCCCcEEEEEEeeCCCC
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL-RG-CLSAVHCLDDKGMEIWIMKEYKVR 290 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~-~G-~L~~~~~~~~~~~~IW~l~~~~~~ 290 (390)
+|.+||..... ..|..+|+.+.+...+...... .. +... +| .|++.... .. -.||.++..+
T Consensus 141 ~g~lyv~d~~~-------~~I~~id~~~g~~~~~~~~~~~----~~--ia~~~~g~~l~~~d~~-~~-~~I~~~d~~~-- 203 (409)
T 3hrp_A 141 NNTVLAYQRDD-------PRVRLISVDDNKVTTVHPGFKG----GK--PAVTKDKQRVYSIGWE-GT-HTVYVYMKAS-- 203 (409)
T ss_dssp TTEEEEEETTT-------TEEEEEETTTTEEEEEEETCCB----CB--CEECTTSSEEEEEBSS-TT-CEEEEEEGGG--
T ss_pred CCCEEEEecCC-------CcEEEEECCCCEEEEeeccCCC----Cc--eeEecCCCcEEEEecC-CC-ceEEEEEcCC--
Confidence 68899876542 3899999998877766332211 12 3332 34 45555543 22 2677776432
Q ss_pred CceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee-CCceEeeeeCCeEEEEeCCCCcEEEE
Q 016367 291 ESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK-NGEILLEYANGALVSYNPENEELKDL 361 (390)
Q Consensus 291 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~il~~~~~~~l~~yd~~t~~~~~v 361 (390)
.|.. ..+.. + .. ..... ..-+++.. +|.|++...+..++.||++++....+
T Consensus 204 -~~~~-~~~g~-~-----------~~-----~~~~~-p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 204 -GWAP-TRIGQ-L-----------GS-----TFSGK-IGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp -TTCE-EEEEE-C-----------CT-----TSCSC-CCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred -Ccee-EEeee-c-----------cc-----hhcCC-cEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 2331 12211 0 00 00011 33346666 67777754556799999998876554
No 57
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=78.79 E-value=31 Score=29.66 Aligned_cols=125 Identities=11% Similarity=0.012 Sum_probs=69.8
Q ss_pred CCCcccCCCCceE-EECCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCCCCcceEEEEeCCeEEEEEeCC
Q 016367 198 PVPWRLNPGASEA-LLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSLSVCNFHLVVLRGCLSAVHCLD 275 (390)
Q Consensus 198 ~~p~~~~~~~~~v-~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~~~~~~ 275 (390)
..|.....+..++ +.+|.||--.... ....|..+|+.+.+. ..+++|... ...-+...+++|++....
T Consensus 36 ~~phd~~~ftqGL~~~~~~LyestG~~-----g~S~v~~vD~~Tgkv~~~~~l~~~~----FgeGit~~g~~ly~ltw~- 105 (262)
T 3nol_A 36 SYPHDTKAFTEGFFYRNGYFYESTGLN-----GRSSIRKVDIESGKTLQQIELGKRY----FGEGISDWKDKIVGLTWK- 105 (262)
T ss_dssp EEECCTTCEEEEEEEETTEEEEEEEET-----TEEEEEEECTTTCCEEEEEECCTTC----CEEEEEEETTEEEEEESS-
T ss_pred EecCCCCcccceEEEECCEEEEECCCC-----CCceEEEEECCCCcEEEEEecCCcc----ceeEEEEeCCEEEEEEee-
Confidence 3333333333443 4467666554432 123799999998765 556777653 334466678888886554
Q ss_pred CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc-eEeeeeCCeEEEEeCC
Q 016367 276 DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE-ILLEYANGALVSYNPE 354 (390)
Q Consensus 276 ~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~~~~~~l~~yd~~ 354 (390)
.. .+|+.+- ..-.++.+|+. .. .+ + ++..+++ +++......+..+|++
T Consensus 106 ~~--~v~v~D~----~t~~~~~ti~~-------------~~------eG---~---glt~dg~~L~~SdGs~~i~~iDp~ 154 (262)
T 3nol_A 106 NG--LGFVWNI----RNLRQVRSFNY-------------DG------EG---W---GLTHNDQYLIMSDGTPVLRFLDPE 154 (262)
T ss_dssp SS--EEEEEET----TTCCEEEEEEC-------------SS------CC---C---CEEECSSCEEECCSSSEEEEECTT
T ss_pred CC--EEEEEEC----ccCcEEEEEEC-------------CC------Cc---e---EEecCCCEEEEECCCCeEEEEcCC
Confidence 33 3445541 23346677776 11 01 1 2334454 4444446679999999
Q ss_pred CCcE-EEEEE
Q 016367 355 NEEL-KDLVI 363 (390)
Q Consensus 355 t~~~-~~v~~ 363 (390)
|.+. ..|..
T Consensus 155 T~~v~~~I~V 164 (262)
T 3nol_A 155 SLTPVRTITV 164 (262)
T ss_dssp TCSEEEEEEC
T ss_pred CCeEEEEEEe
Confidence 8665 44433
No 58
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=78.74 E-value=39 Score=30.84 Aligned_cols=182 Identities=10% Similarity=0.024 Sum_probs=93.4
Q ss_pred ccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCccccc
Q 016367 117 NPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRYL 196 (390)
Q Consensus 117 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~~ 196 (390)
..++++|..|++...+..... ....+.+.|.. ++-++. .. . .....+.+++..++ ..+.+
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-----~~~~~~~spdg-~~la~~-~~-~-----------~g~~~i~~~d~~~~-~~~~l 262 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-----HNGAPAFSPDG-SKLAFA-LS-K-----------TGSLNLYVMDLASG-QIRQV 262 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-----CEEEEEECTTS-SEEEEE-EC-T-----------TSSCEEEEEETTTC-CEEEC
T ss_pred cEEEEEECCCCcEEEeecCCC-----cccCEEEcCCC-CEEEEE-Ee-c-----------CCCceEEEEECCCC-CEEeC
Confidence 589999999998876643321 24466777743 333322 11 1 22457888999888 66554
Q ss_pred CCCCcccCCCCceEEE--CCc-EEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE-eCCeEEE-E
Q 016367 197 GPVPWRLNPGASEALL--NGS-LHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV-LRGCLSA-V 271 (390)
Q Consensus 197 ~~~p~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~-~ 271 (390)
...+. ....+.+ +|. ++...... ....|..+|+.+.+...+..... ....+.. -+|+..+ .
T Consensus 263 ~~~~~----~~~~~~~spdg~~l~~~s~~~-----g~~~i~~~d~~~~~~~~l~~~~~-----~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 263 TDGRS----NNTEPTWFPDSQNLAFTSDQA-----GRPQVYKVNINGGAPQRITWEGS-----QNQDADVSSDGKFMVMV 328 (415)
T ss_dssp CCCSS----CEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTSSCCEECCCSSS-----EEEEEEECTTSSEEEEE
T ss_pred cCCCC----cccceEECCCCCEEEEEECCC-----CCcEEEEEECCCCCEEEEecCCC-----cccCeEECCCCCEEEEE
Confidence 33211 1112222 565 44333221 12378888998876554432211 1222222 3565444 4
Q ss_pred EeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEe-eeeCC---e
Q 016367 272 HCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILL-EYANG---A 347 (390)
Q Consensus 272 ~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~-~~~~~---~ 347 (390)
... .....||+++-. +... ..+.. .. . ...+.+..+|..++ ...+. .
T Consensus 329 ~~~-~g~~~i~~~d~~--~~~~---~~l~~-------------~~---------~-~~~~~~spdg~~l~~~s~~~~~~~ 379 (415)
T 2hqs_A 329 SSN-GGQQHIAKQDLA--TGGV---QVLSS-------------TF---------L-DETPSLAPNGTMVIYSSSQGMGSV 379 (415)
T ss_dssp EEC-SSCEEEEEEETT--TCCE---EECCC-------------SS---------S-CEEEEECTTSSEEEEEEEETTEEE
T ss_pred ECc-CCceEEEEEECC--CCCE---EEecC-------------CC---------C-cCCeEEcCCCCEEEEEEcCCCccE
Confidence 433 333444444421 1122 12221 00 1 44456777777444 44333 6
Q ss_pred EEEEeCCCCcEEEE
Q 016367 348 LVSYNPENEELKDL 361 (390)
Q Consensus 348 l~~yd~~t~~~~~v 361 (390)
++.+|++++..+.+
T Consensus 380 l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 380 LNLVSTDGRFKARL 393 (415)
T ss_dssp EEEEETTSCCEEEC
T ss_pred EEEEECCCCcEEEe
Confidence 99999998887766
No 59
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=78.49 E-value=48 Score=31.71 Aligned_cols=105 Identities=11% Similarity=0.134 Sum_probs=61.1
Q ss_pred EEEEEECCCceeee-ecCCCCCCCCCcceEEEEeC-CeEEEEEeCCCCcEEEEEEeeC-CCCCceEEEEEEccCCCcccc
Q 016367 232 RIMSFDLAEEDFGE-IGLPDCGSLSVCNFHLVVLR-GCLSAVHCLDDKGMEIWIMKEY-KVRESWSKDYIIGTYLPASLR 308 (390)
Q Consensus 232 ~il~fD~~~e~~~~-i~lP~~~~~~~~~~~L~~~~-G~L~~~~~~~~~~~~IW~l~~~-~~~~~W~~~~~i~~~~~~~~~ 308 (390)
.|.++|+.+.+... ++........ ....+..-+ |.+++.......++.||-.+.. .....|..+.++..
T Consensus 347 ~v~v~D~~tg~l~~~i~~g~~ph~g-~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~------- 418 (543)
T 1nir_A 347 KVAVIDSKDRRLSALVDVGKTPHPG-RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG------- 418 (543)
T ss_dssp EEEEEETTTTEEEEEEECSSSBCCT-TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC-------
T ss_pred eEEEEECCCCeEEEeeccCCCCCCC-CCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc-------
Confidence 78889999876644 3432111110 223333334 6666644322678999988742 11235999888886
Q ss_pred cCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee--------CCeEEEEeCCCCcEE
Q 016367 309 ENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA--------NGALVSYNPENEELK 359 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~--------~~~l~~yd~~t~~~~ 359 (390)
... . ...+.++.+|..++... +..+.+||.+|.+..
T Consensus 419 ------~g~------~---~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 419 ------QGG------G---SLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp ------SCS------C---CCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred ------CCC------C---ceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 221 1 23345677777555542 346999999987654
No 60
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=77.46 E-value=30 Score=28.85 Aligned_cols=200 Identities=12% Similarity=-0.026 Sum_probs=97.2
Q ss_pred ecCceEEeeeccccccEEEEcCCC-cceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCe
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFT-GSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSD 181 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 181 (390)
+-+|-.++... ...++++|..+ ++...+....... ....+.+.|.. ++-++. .. . ......
T Consensus 50 spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~spdg-~~l~~~-~~-~----------~~~~~~ 111 (297)
T 2ojh_A 50 SPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATI---CNNDHGISPDG-ALYAIS-DK-V----------EFGKSA 111 (297)
T ss_dssp CTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCC---BCSCCEECTTS-SEEEEE-EC-T----------TTSSCE
T ss_pred CCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccc---cccceEECCCC-CEEEEE-Ee-C----------CCCcce
Confidence 33554433333 46899999999 8776665332111 11234556543 332222 21 1 112456
Q ss_pred EEEEEeCCCCcccccCCCCcccCCCCceEEECCc-EEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceE
Q 016367 182 VEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGS-LHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFH 260 (390)
Q Consensus 182 ~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~ 260 (390)
+++++..++ .-+.+..... .. .....-+|. +++..... ....|..+|..+.....+..... ....
T Consensus 112 l~~~~~~~~-~~~~~~~~~~-~~--~~~~spdg~~l~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~-----~~~~ 177 (297)
T 2ojh_A 112 IYLLPSTGG-TPRLMTKNLP-SY--WHGWSPDGKSFTYCGIRD-----QVFDIYSMDIDSGVETRLTHGEG-----RNDG 177 (297)
T ss_dssp EEEEETTCC-CCEECCSSSS-EE--EEEECTTSSEEEEEEEET-----TEEEEEEEETTTCCEEECCCSSS-----CEEE
T ss_pred EEEEECCCC-ceEEeecCCC-cc--ceEECCCCCEEEEEECCC-----CceEEEEEECCCCcceEcccCCC-----cccc
Confidence 777777777 5444332111 00 001112454 33333322 12367777777666554432211 1222
Q ss_pred EEE-eCCeEEE-EEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc
Q 016367 261 LVV-LRGCLSA-VHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE 338 (390)
Q Consensus 261 L~~-~~G~L~~-~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (390)
+.. -+|+..+ .... ...+.||.++-.+ .. ...+.. .. .. ...+.+..+|+
T Consensus 178 ~~~s~dg~~l~~~~~~-~~~~~i~~~~~~~--~~---~~~~~~-------------~~--------~~-~~~~~~s~dg~ 229 (297)
T 2ojh_A 178 PDYSPDGRWIYFNSSR-TGQMQIWRVRVDG--SS---VERITD-------------SA--------YG-DWFPHPSPSGD 229 (297)
T ss_dssp EEECTTSSEEEEEECT-TSSCEEEEEETTS--SC---EEECCC-------------CS--------EE-EEEEEECTTSS
T ss_pred ceECCCCCEEEEEecC-CCCccEEEECCCC--CC---cEEEec-------------CC--------cc-cCCeEECCCCC
Confidence 332 3565444 4443 5689999987322 11 122221 00 01 34455666776
Q ss_pred eEee-eeC-----------CeEEEEeCCCCcEEEEE
Q 016367 339 ILLE-YAN-----------GALVSYNPENEELKDLV 362 (390)
Q Consensus 339 il~~-~~~-----------~~l~~yd~~t~~~~~v~ 362 (390)
.++. ..+ ..++.||+++++.+.+.
T Consensus 230 ~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 230 KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 4433 322 45999999999887763
No 61
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=76.97 E-value=36 Score=29.93 Aligned_cols=85 Identities=16% Similarity=0.238 Sum_probs=49.3
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA 344 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~ 344 (390)
+|++.+.... +..+.||-++. ..|.....+.. +.... +.-+.+..+|..++...
T Consensus 27 ~g~~las~~~-D~~i~iw~~~~----~~~~~~~~~~~--------------------~h~~~-v~~~~~sp~g~~l~s~s 80 (345)
T 3fm0_A 27 AGTLLASCGG-DRRIRIWGTEG----DSWICKSVLSE--------------------GHQRT-VRKVAWSPCGNYLASAS 80 (345)
T ss_dssp TSSCEEEEET-TSCEEEEEEET----TEEEEEEEECS--------------------SCSSC-EEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEcC-CCeEEEEEcCC----Ccceeeeeecc--------------------ccCCc-EEEEEECCCCCEEEEEE
Confidence 5666664444 78999999873 35654443322 11112 56667777777666554
Q ss_pred -CCeEEEEeCCCCcEEEE-EEeCCCCceEEEee
Q 016367 345 -NGALVSYNPENEELKDL-VIFDPPKWFCSIVH 375 (390)
Q Consensus 345 -~~~l~~yd~~t~~~~~v-~~~~~~~~~~~~~y 375 (390)
+..+..||.+++..+.+ .+.+.......+.+
T Consensus 81 ~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~ 113 (345)
T 3fm0_A 81 FDATTCIWKKNQDDFECVTTLEGHENEVKSVAW 113 (345)
T ss_dssp TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEE
T ss_pred CCCcEEEEEccCCCeEEEEEccCCCCCceEEEE
Confidence 56688899888876655 34443333344444
No 62
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=76.73 E-value=21 Score=32.38 Aligned_cols=100 Identities=5% Similarity=0.001 Sum_probs=54.7
Q ss_pred EEEEEECCCceeeeecCCCCCCCCCcce-EEEE-eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCccccc
Q 016367 232 RIMSFDLAEEDFGEIGLPDCGSLSVCNF-HLVV-LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRE 309 (390)
Q Consensus 232 ~il~fD~~~e~~~~i~lP~~~~~~~~~~-~L~~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 309 (390)
.|..+|+.+.+......+.......... .+.. -+|.+.+.... ...+.+|-++.. ..+.++..
T Consensus 145 ~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~-d~~v~~~d~~~~------~~~~~~~~-------- 209 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ-ANAVHVFDLKTL------AYKATVDL-------- 209 (433)
T ss_dssp SEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG-GTEEEEEETTTC------CEEEEEEC--------
T ss_pred eEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC-CCEEEEEECCCc------eEEEEEcC--------
Confidence 5889999877665432211100000111 2222 36777776655 678999987631 12333332
Q ss_pred CcCcchhhhhccCCCCcceEEEEEeeCCceEee-e-eCCeEEEEeCCCCcEEE
Q 016367 310 NARPHLEMLKKSGLGRGSSQVVCDWKNGEILLE-Y-ANGALVSYNPENEELKD 360 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~-~~~~l~~yd~~t~~~~~ 360 (390)
.. .. ..-+++..++..++. . .+..+..||+++++...
T Consensus 210 -----~~--------~~-~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 210 -----TG--------KW-SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp -----SS--------SS-EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -----CC--------CC-eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 11 01 445567777765543 3 35679999998886543
No 63
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=76.59 E-value=39 Score=29.64 Aligned_cols=191 Identities=9% Similarity=-0.059 Sum_probs=98.0
Q ss_pred CceEEeeeccccccEEEEcCCCcce-ecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEE
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSY-LELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVE 183 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 183 (390)
++.+.+.... ...+.|+|+.|++. ..+|... ...++++++. . ++..... ..-.+.
T Consensus 53 ~~~lyv~~~~-~~~v~viD~~t~~~~~~i~~~~------~p~~i~~~~~--g-~lyv~~~--------------~~~~v~ 108 (328)
T 3dsm_A 53 DGIGWIVVNN-SHVIFAIDINTFKEVGRITGFT------SPRYIHFLSD--E-KAYVTQI--------------WDYRIF 108 (328)
T ss_dssp TTEEEEEEGG-GTEEEEEETTTCCEEEEEECCS------SEEEEEEEET--T-EEEEEEB--------------SCSEEE
T ss_pred CCEEEEEEcC-CCEEEEEECcccEEEEEcCCCC------CCcEEEEeCC--C-eEEEEEC--------------CCCeEE
Confidence 4555444331 46899999999886 4565321 1335666553 3 4443221 124688
Q ss_pred EEEeCCCCcccc-cCCCCccc----CCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceee-eecCCCCCCCCCc
Q 016367 184 VLTVGIDHTWRY-LGPVPWRL----NPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFG-EIGLPDCGSLSVC 257 (390)
Q Consensus 184 vyss~~~~~W~~-~~~~p~~~----~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~ 257 (390)
+++..++ .-.. ++ ..... .. ..-+..+|.+|...... ...|.++|+.+.+.. .++..... .
T Consensus 109 ~iD~~t~-~~~~~i~-~g~~~~~~~~p-~~i~~~~~~lyv~~~~~------~~~v~viD~~t~~~~~~i~~g~~p----~ 175 (328)
T 3dsm_A 109 IINPKTY-EITGYIE-CPDMDMESGST-EQMVQYGKYVYVNCWSY------QNRILKIDTETDKVVDELTIGIQP----T 175 (328)
T ss_dssp EEETTTT-EEEEEEE-CTTCCTTTCBC-CCEEEETTEEEEEECTT------CCEEEEEETTTTEEEEEEECSSCB----C
T ss_pred EEECCCC-eEEEEEE-cCCccccCCCc-ceEEEECCEEEEEcCCC------CCEEEEEECCCCeEEEEEEcCCCc----c
Confidence 8898887 4321 21 11100 11 12223566777654311 138999999987654 34443322 1
Q ss_pred ceEEEEeCCeEEEEEeCCCC-------cEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEE
Q 016367 258 NFHLVVLRGCLSAVHCLDDK-------GMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQV 330 (390)
Q Consensus 258 ~~~L~~~~G~L~~~~~~~~~-------~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (390)
.. ...-+|+|+++...... .-.|++++-. +. ....++.. .. +.. ..-
T Consensus 176 ~i-~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~--~v~~~~~~-------------~~-------g~~-p~~ 229 (328)
T 3dsm_A 176 SL-VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--TF--TVEKQFKF-------------KL-------GDW-PSE 229 (328)
T ss_dssp CC-EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--TT--EEEEEEEC-------------CT-------TCC-CEE
T ss_pred ce-EEcCCCCEEEEECCCccCCccccCCceEEEEECC--CC--eEEEEEec-------------CC-------CCC-cee
Confidence 11 12336888774432100 1345555421 22 23334443 10 111 445
Q ss_pred EEEeeCCceEeeeeCCeEEEEeCCCCcEE
Q 016367 331 VCDWKNGEILLEYANGALVSYNPENEELK 359 (390)
Q Consensus 331 ~~~~~~g~il~~~~~~~l~~yd~~t~~~~ 359 (390)
+++..+++.++.... .++.+|++++++.
T Consensus 230 la~~~d~~~lyv~~~-~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 230 VQLNGTRDTLYWINN-DIWRMPVEADRVP 257 (328)
T ss_dssp EEECTTSCEEEEESS-SEEEEETTCSSCC
T ss_pred EEEecCCCEEEEEcc-EEEEEECCCCcee
Confidence 677766665555444 6999999988763
No 64
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=76.56 E-value=61 Score=31.91 Aligned_cols=143 Identities=17% Similarity=0.079 Sum_probs=73.5
Q ss_pred ccEEEEcCCCccee--cccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCccc
Q 016367 117 NPIIVCNPFTGSYL--ELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWR 194 (390)
Q Consensus 117 ~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~ 194 (390)
..+++++.-|++.. .+-...... ....+..+.|.. +|-++.... . .....+++++..++ .|+
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~--~~~~~~~~SpDG-~~l~~~~~~-~-----------~~~~~l~~~~~~~~-~~~ 265 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDP--TTFLQSDLSRDG-KYLFVYILR-G-----------WSENDVYWKRPGEK-DFR 265 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCT--TCEEEEEECTTS-CCEEEEEEE-T-----------TTEEEEEEECTTCS-SCE
T ss_pred CEEEEEECCCCchhceEEEecCCCC--EEEEEEEECCCC-CEEEEEEeC-C-----------CCceEEEEEcCCCC-ceE
Confidence 44888888887632 221111111 123455666643 555544322 1 01235555555566 777
Q ss_pred ccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCce---eeeecCCCCCCCCCcceEEEEeCCeEEEE
Q 016367 195 YLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEED---FGEIGLPDCGSLSVCNFHLVVLRGCLSAV 271 (390)
Q Consensus 195 ~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~---~~~i~lP~~~~~~~~~~~L~~~~G~L~~~ 271 (390)
.+.... ......+..+|.+|...... .....|..+|+.+.. |..+-.+.... ....+...+|.|.+.
T Consensus 266 ~l~~~~---~~~~~~~~~~g~l~~~s~~~----~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---~l~~~~~~~~~lv~~ 335 (695)
T 2bkl_A 266 LLVKGV---GAKYEVHAWKDRFYVLTDEG----APRQRVFEVDPAKPARASWKEIVPEDSSA---SLLSVSIVGGHLSLE 335 (695)
T ss_dssp EEEECS---SCCEEEEEETTEEEEEECTT----CTTCEEEEEBTTBCSGGGCEEEECCCSSC---EEEEEEEETTEEEEE
T ss_pred EeecCC---CceEEEEecCCcEEEEECCC----CCCCEEEEEeCCCCCccCCeEEecCCCCC---eEEEEEEECCEEEEE
Confidence 664211 11123445677755543321 113589999997644 55553222110 122334458888886
Q ss_pred EeCCCCcEEEEEEee
Q 016367 272 HCLDDKGMEIWIMKE 286 (390)
Q Consensus 272 ~~~~~~~~~IW~l~~ 286 (390)
... ....+||+++-
T Consensus 336 ~~~-dg~~~l~~~~~ 349 (695)
T 2bkl_A 336 YLK-DATSEVRVATL 349 (695)
T ss_dssp EEE-TTEEEEEEEET
T ss_pred EEE-CCEEEEEEEeC
Confidence 655 66788998873
No 65
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=76.14 E-value=36 Score=29.11 Aligned_cols=182 Identities=12% Similarity=0.063 Sum_probs=89.0
Q ss_pred cccEEEEcCCCccee-cccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCC-cc
Q 016367 116 FNPIIVCNPFTGSYL-ELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDH-TW 193 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~-~W 193 (390)
...++++|+.|++.+ +++..... ......+.|.. ++ +. .. ...+..|+. +++ .|
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~~----~~~~~~~~pdG-~i--lv-s~---------------~~~V~~~d~-~G~~~W 69 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKGW----ECNSVAATKAG-EI--LF-SY---------------SKGAKMITR-DGRELW 69 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTTC----CCCEEEECTTS-CE--EE-EC---------------BSEEEEECT-TSCEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCccC----CCcCeEECCCC-CE--EE-eC---------------CCCEEEECC-CCCEEE
Confidence 578899999888733 33432100 01133445532 32 22 11 134777777 554 66
Q ss_pred cccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCC--CcceEEEEeCCeEEEE
Q 016367 194 RYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLS--VCNFHLVVLRGCLSAV 271 (390)
Q Consensus 194 ~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~--~~~~~L~~~~G~L~~~ 271 (390)
+....-.... ....+..+|.++...... ...++.||...+....+.+....... .....-...+|.+.++
T Consensus 70 ~~~~~~~~~~--~~~~~~~dG~~lv~~~~~------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 70 NIAAPAGCEM--QTARILPDGNALVAWCGH------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp EEECCTTCEE--EEEEECTTSCEEEEEEST------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred EEcCCCCccc--cccEECCCCCEEEEecCC------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 5432100011 012334567766554331 13789999877655555443321110 0111112346776665
Q ss_pred EeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-CCeEEE
Q 016367 272 HCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA-NGALVS 350 (390)
Q Consensus 272 ~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-~~~l~~ 350 (390)
... ...+..|-.+ + +..|+... +. .+ .. ..+..+|.+++... +.+++.
T Consensus 142 ~~~-~~~v~~~d~~--G-~~~w~~~~--~~-------------~~-----------~~-~~~~~~g~~~v~~~~~~~v~~ 190 (276)
T 3no2_A 142 LFA-TSEVREIAPN--G-QLLNSVKL--SG-------------TP-----------FS-SAFLDNGDCLVACGDAHCFVQ 190 (276)
T ss_dssp ETT-TTEEEEECTT--S-CEEEEEEC--SS-------------CC-----------CE-EEECTTSCEEEECBTTSEEEE
T ss_pred ecC-CCEEEEECCC--C-CEEEEEEC--CC-------------Cc-----------cc-eeEcCCCCEEEEeCCCCeEEE
Confidence 554 5566555544 3 44555322 11 00 11 23345677766554 457999
Q ss_pred EeCCCCcEEE
Q 016367 351 YNPENEELKD 360 (390)
Q Consensus 351 yd~~t~~~~~ 360 (390)
+|++|+++..
T Consensus 191 ~d~~tG~~~w 200 (276)
T 3no2_A 191 LNLESNRIVR 200 (276)
T ss_dssp ECTTTCCEEE
T ss_pred EeCcCCcEEE
Confidence 9999777643
No 66
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=74.58 E-value=39 Score=28.66 Aligned_cols=116 Identities=12% Similarity=0.095 Sum_probs=69.3
Q ss_pred CceE-EECCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCCCCcceEEEEeCCeEEEEEeCCCCcEEEEEE
Q 016367 207 ASEA-LLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSLSVCNFHLVVLRGCLSAVHCLDDKGMEIWIM 284 (390)
Q Consensus 207 ~~~v-~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l 284 (390)
..++ +.+|.+|--.... ....|..+|+.+.+. ..+++|... ...-+...+++|+..... .. .+|+.
T Consensus 23 tqGL~~~~~~LyestG~~-----g~S~v~~vD~~tgkv~~~~~l~~~~----fgeGi~~~~~~ly~ltw~-~~--~v~v~ 90 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGET-----GRSSVRKVDLETGRILQRAEVPPPY----FGAGIVAWRDRLIQLTWR-NH--EGFVY 90 (243)
T ss_dssp EEEEEEETTEEEEEECCT-----TSCEEEEEETTTCCEEEEEECCTTC----CEEEEEEETTEEEEEESS-SS--EEEEE
T ss_pred cccEEEECCEEEEECCCC-----CCceEEEEECCCCCEEEEEeCCCCc----ceeEEEEeCCEEEEEEee-CC--EEEEE
Confidence 4454 4455566543331 113899999988766 556888765 334566678899986554 33 44555
Q ss_pred eeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC-ceEeeeeCCeEEEEeCCCCcE-EEEE
Q 016367 285 KEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG-EILLEYANGALVSYNPENEEL-KDLV 362 (390)
Q Consensus 285 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~il~~~~~~~l~~yd~~t~~~-~~v~ 362 (390)
+ ...-.++.+|+. .. .+ + ++..++ .+++...+.++..+|++|.+. ++|.
T Consensus 91 D----~~tl~~~~ti~~-------------~~------~G---w---glt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 91 D----LATLTPRARFRY-------------PG------EG---W---ALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp E----TTTTEEEEEEEC-------------SS------CC---C---EEEECSSCEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred E----CCcCcEEEEEeC-------------CC------Cc---e---EEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEE
Confidence 5 223456777776 11 01 2 343444 466665677899999999765 4444
Q ss_pred E
Q 016367 363 I 363 (390)
Q Consensus 363 ~ 363 (390)
.
T Consensus 142 V 142 (243)
T 3mbr_X 142 V 142 (243)
T ss_dssp C
T ss_pred E
Confidence 3
No 67
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=74.06 E-value=37 Score=29.44 Aligned_cols=114 Identities=12% Similarity=0.067 Sum_probs=57.9
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE-eCCeEEEEEeCC-CCcEEEEEEeeCCCC
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV-LRGCLSAVHCLD-DKGMEIWIMKEYKVR 290 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~~~~~~-~~~~~IW~l~~~~~~ 290 (390)
+|.+||..... ..|..+|+.+.++..+..+... .-..+.. -+|+|++..... ...-.|++++-.+
T Consensus 55 ~g~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~----~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~-- 121 (333)
T 2dg1_A 55 QGQLFLLDVFE-------GNIFKINPETKEIKRPFVSHKA----NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG-- 121 (333)
T ss_dssp TSCEEEEETTT-------CEEEEECTTTCCEEEEEECSSS----SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS--
T ss_pred CCCEEEEECCC-------CEEEEEeCCCCcEEEEeeCCCC----CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC--
Confidence 68888765432 3799999988877665321111 2223443 367887755431 1112344444221
Q ss_pred CceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-------CCeEEEEeCCCCcEEEE
Q 016367 291 ESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA-------NGALVSYNPENEELKDL 361 (390)
Q Consensus 291 ~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-------~~~l~~yd~~t~~~~~v 361 (390)
..-. ..+.. . ..... ..-+.+..+|.+++... ...++.||+++++++.+
T Consensus 122 ~~~~--~~~~~-------------~------~~~~~-~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 122 DNLQ--DIIED-------------L------STAYC-IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp CSCE--EEECS-------------S------SSCCC-EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred CEEE--EEEcc-------------C------ccCCc-ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 1111 11111 0 00111 44455666777766554 24688888887776654
No 68
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=73.99 E-value=53 Score=29.96 Aligned_cols=30 Identities=7% Similarity=0.011 Sum_probs=19.4
Q ss_pred EEEeeCCceEeeeeCCeEEEEeCCCCcEEE
Q 016367 331 VCDWKNGEILLEYANGALVSYNPENEELKD 360 (390)
Q Consensus 331 ~~~~~~g~il~~~~~~~l~~yd~~t~~~~~ 360 (390)
..+..+|.++....++.+.++|+++++.++
T Consensus 406 ~~fspdg~~lasg~d~~i~iW~~~~gk~rK 435 (435)
T 4e54_B 406 NEFNPMGDTLASAMGYHILIWSQQEARTRK 435 (435)
T ss_dssp EEECTTSSCEEEECSSEEEECCCC------
T ss_pred EEECCCCCEEEEEcCCcEEEEECCcCeeeC
Confidence 356778888777777789999999988764
No 69
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=73.05 E-value=67 Score=30.69 Aligned_cols=194 Identities=7% Similarity=-0.051 Sum_probs=98.8
Q ss_pred CceEEeeeccccccEEEEcCCCccee-cccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEE
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYL-ELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVE 183 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 183 (390)
+|.+++.... ...+.|+|+.|++.. .++... ...++.++|.. +|-++. . . .-.+.
T Consensus 148 ~~~~~vs~~~-d~~V~v~D~~t~~~~~~i~~g~------~~~~v~~spdg-~~l~v~-~--~-------------d~~V~ 203 (543)
T 1nir_A 148 PNLFSVTLRD-AGQIALVDGDSKKIVKVIDTGY------AVHISRMSASG-RYLLVI-G--R-------------DARID 203 (543)
T ss_dssp GGEEEEEEGG-GTEEEEEETTTCCEEEEEECST------TEEEEEECTTS-CEEEEE-E--T-------------TSEEE
T ss_pred CCEEEEEEcC-CCeEEEEECCCceEEEEEecCc------ccceEEECCCC-CEEEEE-C--C-------------CCeEE
Confidence 5666655542 568999999998754 333211 13467777743 443333 1 1 14688
Q ss_pred EEEe--CCCCcccccCCCCcccCCCCceEEE------CCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCC
Q 016367 184 VLTV--GIDHTWRYLGPVPWRLNPGASEALL------NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSL 254 (390)
Q Consensus 184 vyss--~~~~~W~~~~~~p~~~~~~~~~v~~------~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~ 254 (390)
+|+. .++ . .+..++.+.. ..++.+ +|..-+..... ...|..+|..+.+. ..++.+.....
T Consensus 204 v~D~~~~t~-~--~~~~i~~g~~--p~~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~ 272 (543)
T 1nir_A 204 MIDLWAKEP-T--KVAEIKIGIE--ARSVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEPKQIVSTRGMTVD 272 (543)
T ss_dssp EEETTSSSC-E--EEEEEECCSE--EEEEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCEEEEEECCEECSS
T ss_pred EEECcCCCC-c--EEEEEecCCC--cceEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccccceeecccCcccC
Confidence 8888 555 2 2222221111 122322 67654444322 13788999887654 33454321100
Q ss_pred ------CCcceEEEEe-CCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCc
Q 016367 255 ------SVCNFHLVVL-RGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRG 326 (390)
Q Consensus 255 ------~~~~~~L~~~-~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (390)
+..-..+... +|. +++.... ...+.+|-..+.. . .++.+|+. .. +
T Consensus 273 ~~~~~~~~~v~~i~~s~~~~~~~vs~~~-~g~i~vvd~~~~~--~--l~~~~i~~-------------~~---------~ 325 (543)
T 1nir_A 273 TQTYHPEPRVAAIIASHEHPEFIVNVKE-TGKVLLVNYKDID--N--LTVTSIGA-------------AP---------F 325 (543)
T ss_dssp SCCEESCCCEEEEEECSSSSEEEEEETT-TTEEEEEECTTSS--S--CEEEEEEC-------------CS---------S
T ss_pred ccccccCCceEEEEECCCCCEEEEEECC-CCeEEEEEecCCC--c--ceeEEecc-------------Cc---------C
Confidence 0011233333 244 4444333 6666666655321 1 12334443 11 1
Q ss_pred ceEEEEEeeCCceEeee--eCCeEEEEeCCCCcEEEE
Q 016367 327 SSQVVCDWKNGEILLEY--ANGALVSYNPENEELKDL 361 (390)
Q Consensus 327 ~~~~~~~~~~g~il~~~--~~~~l~~yd~~t~~~~~v 361 (390)
..-+++..+|+.++.. .++.+..+|.+++++...
T Consensus 326 -~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 326 -LHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp -CCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred -ccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEe
Confidence 3335677788755443 356799999999987654
No 70
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=72.76 E-value=40 Score=28.03 Aligned_cols=137 Identities=9% Similarity=-0.062 Sum_probs=71.5
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCC-CCccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGI-DHTWR 194 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~-~~~W~ 194 (390)
...++++|+.+++...+..... ....+.+.|.. ++-++. . . ..+.+++..+ + ...
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~-----~v~~~~~spdg-~~l~~~--~-~--------------~~i~~~d~~~~~-~~~ 76 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE-----LFEAPNWSPDG-KYLLLN--S-E--------------GLLYRLSLAGDP-SPE 76 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS-----CCEEEEECTTS-SEEEEE--E-T--------------TEEEEEESSSCC-SCE
T ss_pred ceeEEEEeCCCCceeeeccCCc-----ceEeeEECCCC-CEEEEE--c-C--------------CeEEEEeCCCCC-Cce
Confidence 5679999999998776544321 23356677653 333332 1 1 3688999988 7 655
Q ss_pred ccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE-eCCe-EEEEE
Q 016367 195 YLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV-LRGC-LSAVH 272 (390)
Q Consensus 195 ~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~-~~G~-L~~~~ 272 (390)
.+...............-+|......... . .....|..+|..+.+...+..... ...+.. -+|+ |++..
T Consensus 77 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~--~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~spdg~~l~~~~ 147 (297)
T 2ojh_A 77 KVDTGFATICNNDHGISPDGALYAISDKV-E--FGKSAIYLLPSTGGTPRLMTKNLP------SYWHGWSPDGKSFTYCG 147 (297)
T ss_dssp ECCCTTCCCBCSCCEECTTSSEEEEEECT-T--TSSCEEEEEETTCCCCEECCSSSS------EEEEEECTTSSEEEEEE
T ss_pred EeccccccccccceEECCCCCEEEEEEeC-C--CCcceEEEEECCCCceEEeecCCC------ccceEECCCCCEEEEEE
Confidence 44321110111111223356543333311 0 112478888887766555433221 112222 2565 44444
Q ss_pred eCCCCcEEEEEEee
Q 016367 273 CLDDKGMEIWIMKE 286 (390)
Q Consensus 273 ~~~~~~~~IW~l~~ 286 (390)
.. ...+.||.++-
T Consensus 148 ~~-~~~~~l~~~~~ 160 (297)
T 2ojh_A 148 IR-DQVFDIYSMDI 160 (297)
T ss_dssp EE-TTEEEEEEEET
T ss_pred CC-CCceEEEEEEC
Confidence 44 56789999874
No 71
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=72.34 E-value=50 Score=28.99 Aligned_cols=102 Identities=16% Similarity=0.081 Sum_probs=56.7
Q ss_pred EEEEEECCCceeeee----cCCCCCCCCCcceEEEE-eCCeEEEEEeCC-CCcEEEEEEeeCCCCCceEEEEEEccCCCc
Q 016367 232 RIMSFDLAEEDFGEI----GLPDCGSLSVCNFHLVV-LRGCLSAVHCLD-DKGMEIWIMKEYKVRESWSKDYIIGTYLPA 305 (390)
Q Consensus 232 ~il~fD~~~e~~~~i----~lP~~~~~~~~~~~L~~-~~G~L~~~~~~~-~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~ 305 (390)
.|..||+.+.++..+ ..|.... ....+.. -+|+..++.... ...+.||.++.. ...+..+..+..
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~---~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~--~g~~~~~~~~~~---- 304 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQ---GSGDIHLSPDGKYLYASNRLKADGVAIFKVDET--NGTLTKVGYQLT---- 304 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCC---CEEEEEECTTSSEEEEEECSSSCEEEEEEECTT--TCCEEEEEEEEC----
T ss_pred eEEEEEecCCceEEeEEEecCCCCCC---CcccEEECCCCCEEEEECCCCCCEEEEEEEcCC--CCcEEEeeEecC----
Confidence 788888877766444 2232211 1223333 367644443332 468999999732 234555555443
Q ss_pred ccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee--CCeE--EEEeCCCCcEEEE
Q 016367 306 SLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA--NGAL--VSYNPENEELKDL 361 (390)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~--~~~l--~~yd~~t~~~~~v 361 (390)
.. . ..-+++..+|+.++... ++.+ +.+|+++++++.+
T Consensus 305 ---------g~---------~-~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 305 ---------GI---------H-PRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp ---------SS---------C-CCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred ---------CC---------C-CceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 00 1 33456777887444443 3444 4478889998876
No 72
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=71.45 E-value=45 Score=28.09 Aligned_cols=191 Identities=10% Similarity=0.083 Sum_probs=98.0
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
..+|-+.+.+......+.++|+..+....+.... .....++.+|+.. + ++... . ....+
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~----~~~~~~i~~~~~g-~--l~v~~--~------------~~~~i 144 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATI----LQHPRGVTVDNKG-R--IIVVE--C------------KVMRV 144 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTT----CSCEEEEEECTTS-C--EEEEE--T------------TTTEE
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCcc----CCCceEEEEeCCC-C--EEEEE--C------------CCCEE
Confidence 4677776665322467999996555444443221 1124477788753 3 22211 1 12457
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceE
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFH 260 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~ 260 (390)
.+|+.... ..+.... +... ....++.+ +|.+|...... ..|..||...+....+..+.... .-..
T Consensus 145 ~~~~~~g~-~~~~~~~-~~~~-~~p~~i~~~~~g~l~v~~~~~-------~~i~~~~~~g~~~~~~~~~g~~~---~p~~ 211 (286)
T 1q7f_A 145 IIFDQNGN-VLHKFGC-SKHL-EFPNGVVVNDKQEIFISDNRA-------HCVKVFNYEGQYLRQIGGEGITN---YPIG 211 (286)
T ss_dssp EEECTTSC-EEEEEEC-TTTC-SSEEEEEECSSSEEEEEEGGG-------TEEEEEETTCCEEEEESCTTTSC---SEEE
T ss_pred EEEcCCCC-EEEEeCC-CCcc-CCcEEEEECCCCCEEEEECCC-------CEEEEEcCCCCEEEEEccCCccC---CCcE
Confidence 77775433 3322211 0011 11224444 47766543322 38999999877666665443211 1223
Q ss_pred EEE-eCCeEEEEEeCCC-CcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc
Q 016367 261 LVV-LRGCLSAVHCLDD-KGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE 338 (390)
Q Consensus 261 L~~-~~G~L~~~~~~~~-~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (390)
+.. .+|.|++.... . ..+.+|-.+ + . .+..+... .. ... ..-+++..+|.
T Consensus 212 i~~d~~G~l~v~~~~-~~~~i~~~~~~--g---~--~~~~~~~~------------~~-------~~~-~~~i~~~~~g~ 263 (286)
T 1q7f_A 212 VGINSNGEILIADNH-NNFNLTIFTQD--G---Q--LISALESK------------VK-------HAQ-CFDVALMDDGS 263 (286)
T ss_dssp EEECTTCCEEEEECS-SSCEEEEECTT--S---C--EEEEEEES------------SC-------CSC-EEEEEEETTTE
T ss_pred EEECCCCCEEEEeCC-CCEEEEEECCC--C---C--EEEEEccc------------CC-------CCc-ceeEEECCCCc
Confidence 444 36888886654 4 378887532 1 1 22233320 00 001 33456777888
Q ss_pred eEeeeeCCeEEEEeCCC
Q 016367 339 ILLEYANGALVSYNPEN 355 (390)
Q Consensus 339 il~~~~~~~l~~yd~~t 355 (390)
+++...+..+..|+...
T Consensus 264 l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 264 VVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEEETTTEEEEEECSC
T ss_pred EEEECCCCeEEEEEccc
Confidence 88776666788887754
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=70.55 E-value=64 Score=29.45 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=55.5
Q ss_pred EEEEEECCCceee-eecCCCCCCCCCcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccC
Q 016367 232 RIMSFDLAEEDFG-EIGLPDCGSLSVCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLREN 310 (390)
Q Consensus 232 ~il~fD~~~e~~~-~i~lP~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 310 (390)
.|..+|+.+.+.. .+.... ........+|...++... +..+.+|-++... +......
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~------~~v~~~~~~~~~l~s~s~-dg~v~vwd~~~~~------~~~~~~~--------- 390 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHT------ALVGLLRLSDKFLVSAAA-DGSIRGWDANDYS------RKFSYHH--------- 390 (464)
T ss_dssp CEEEEETTTTEEEEEECCCS------SCEEEEEECSSEEEEEET-TSEEEEEETTTCC------EEEEEEC---------
T ss_pred cEEEEECCCCcEEEEEeCCC------CcEEEEEEcCCEEEEEeC-CCcEEEEECCCCc------eeeeecC---------
Confidence 5777888665432 222221 122333345665555554 7789999887421 2233222
Q ss_pred cCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCeEEEEeCCCCcEEE
Q 016367 311 ARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGALVSYNPENEELKD 360 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~t~~~~~ 360 (390)
.. . ...+++..++.+++...++.+..||+++++...
T Consensus 391 ----~~---------~-~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 391 ----TN---------L-SAITTFYVSDNILVSGSENQFNIYNLRSGKLVH 426 (464)
T ss_dssp ----TT---------C-CCEEEEEECSSEEEEEETTEEEEEETTTCCEEE
T ss_pred ----CC---------C-ccEEEEEeCCCEEEEecCCeEEEEECCCCcEEe
Confidence 11 1 444567777888887778889999999988654
No 74
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=70.28 E-value=50 Score=28.12 Aligned_cols=200 Identities=12% Similarity=0.081 Sum_probs=95.3
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...++++||.+++...+..+..........++.+++..+..-|. . . ...+.+|+.. + ..+.
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~--~--~-------------~~~l~~~d~~-g-~~~~ 105 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA--D--M-------------RLGLLVVQTD-G-TFEE 105 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE--E--T-------------TTEEEEEETT-S-CEEE
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE--E--C-------------CCCEEEEeCC-C-CEEE
Confidence 46799999999887665431100001134577777653332221 1 1 1257788887 7 6554
Q ss_pred c-CCCCcccC-CCCceEEE--CCcEEEEEeecc--------CCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE
Q 016367 196 L-GPVPWRLN-PGASEALL--NGSLHWVTMRYK--------NNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV 263 (390)
Q Consensus 196 ~-~~~p~~~~-~~~~~v~~--~G~lywl~~~~~--------~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~ 263 (390)
+ ........ .....+.+ +|.+|+...... ........|..+|.. .++..+.-... ....+..
T Consensus 106 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~-----~~~~i~~ 179 (314)
T 1pjx_A 106 IAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ-----FPNGIAV 179 (314)
T ss_dssp CCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES-----SEEEEEE
T ss_pred EEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC-----CcceEEE
Confidence 4 22111111 11234444 577765433210 000111478899987 55544311100 1112222
Q ss_pred -----eCC-eEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC
Q 016367 264 -----LRG-CLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG 337 (390)
Q Consensus 264 -----~~G-~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (390)
-+| .|++.... ...+.+|-++..+ .......+.. + .. ..... ..-+++..+|
T Consensus 180 ~~~~d~dg~~l~v~~~~-~~~i~~~~~~~~g---~~~~~~~~~~-~-----------~~-----~~~~~-p~~i~~d~~G 237 (314)
T 1pjx_A 180 RHMNDGRPYQLIVAETP-TKKLWSYDIKGPA---KIENKKVWGH-I-----------PG-----THEGG-ADGMDFDEDN 237 (314)
T ss_dssp EECTTSCEEEEEEEETT-TTEEEEEEEEETT---EEEEEEEEEE-C-----------CC-----CSSCE-EEEEEEBTTC
T ss_pred ecccCCCCCEEEEEECC-CCeEEEEECCCCC---ccccceEEEE-C-----------CC-----CCCCC-CCceEECCCC
Confidence 245 45555544 5677777665322 2332222111 0 00 00011 3445667778
Q ss_pred ceEeeee-CCeEEEEeCCCCcE-EEEE
Q 016367 338 EILLEYA-NGALVSYNPENEEL-KDLV 362 (390)
Q Consensus 338 ~il~~~~-~~~l~~yd~~t~~~-~~v~ 362 (390)
.+++... ...+..||+++++. ..+.
T Consensus 238 ~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 238 NLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp CEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred CEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 8877753 56799999996553 4443
No 75
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=69.99 E-value=53 Score=28.28 Aligned_cols=113 Identities=8% Similarity=-0.096 Sum_probs=63.8
Q ss_pred CceEEE-CCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCCCCcceEEEEeCCeEEEEEeCCCCcEEEEEE
Q 016367 207 ASEALL-NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSLSVCNFHLVVLRGCLSAVHCLDDKGMEIWIM 284 (390)
Q Consensus 207 ~~~v~~-~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l 284 (390)
..++.+ +|.||--.... ..|..+|+.+.+. ..+ +|... ...-+...+++|++.... .. .+|+.
T Consensus 57 tqGL~~~~~~Ly~stG~~-------g~v~~iD~~Tgkv~~~~-l~~~~----FgeGit~~g~~Ly~ltw~-~~--~v~V~ 121 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQ-------GTLRQLSLESAQPVWME-RLGNI----FAEGLASDGERLYQLTWT-EG--LLFTW 121 (268)
T ss_dssp EEEEEEETTEEEEEETTT-------TEEEECCSSCSSCSEEE-ECTTC----CEEEEEECSSCEEEEESS-SC--EEEEE
T ss_pred cceEEEECCEEEEEcCCC-------CEEEEEECCCCcEEeEE-CCCCc----ceeEEEEeCCEEEEEEcc-CC--EEEEE
Confidence 345544 45555443332 2599999988755 345 66543 233456677888886544 33 44555
Q ss_pred eeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc-eEeeeeCCeEEEEeCCCCcEE-EEE
Q 016367 285 KEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE-ILLEYANGALVSYNPENEELK-DLV 362 (390)
Q Consensus 285 ~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~~~~~~l~~yd~~t~~~~-~v~ 362 (390)
+ ...-.++.+|+. .. .+ + ++..+|+ +++...+..+..+|++|.+.. .|.
T Consensus 122 D----~~Tl~~~~ti~~-------------~~------eG---w---GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 122 S----GMPPQRERTTRY-------------SG------EG---W---GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp E----TTTTEEEEEEEC-------------SS------CC---C---CEEEETTEEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred E----CCcCcEEEEEeC-------------CC------ce---e---EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEE
Confidence 5 223456677776 11 11 1 2333444 555555778999999997654 444
Q ss_pred E
Q 016367 363 I 363 (390)
Q Consensus 363 ~ 363 (390)
.
T Consensus 173 V 173 (268)
T 3nok_A 173 V 173 (268)
T ss_dssp C
T ss_pred e
Confidence 3
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=69.77 E-value=54 Score=28.31 Aligned_cols=29 Identities=17% Similarity=0.318 Sum_probs=17.2
Q ss_pred eEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEE
Q 016367 267 CLSAVHCLDDKGMEIWIMKEYKVRESWSKDYII 299 (390)
Q Consensus 267 ~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i 299 (390)
++.+.... +..+.||-++. ...|.....+
T Consensus 180 ~~l~sgs~-D~~v~lWd~~~---~~~~~~~~~l 208 (316)
T 3bg1_A 180 KRFASGGC-DNLIKLWKEEE---DGQWKEEQKL 208 (316)
T ss_dssp CBEECCBT-TSBCCEEEECT---TSCEEEEECC
T ss_pred ceEEEecC-CCeEEEEEeCC---CCccceeeec
Confidence 33444444 77899999863 2357655443
No 77
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=69.68 E-value=47 Score=27.56 Aligned_cols=136 Identities=11% Similarity=0.062 Sum_probs=65.1
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
..+.+|+.+++ ..+..... .. ....++.+ +|.+|+..... .|..||..+.....+..+... .
T Consensus 46 ~~i~~~~~~~~-~~~~~~~~--~~-~~p~~i~~~~~g~l~v~~~~~--------~i~~~d~~~~~~~~~~~~~~~----~ 109 (270)
T 1rwi_B 46 GRVVKLATGST-GTTVLPFN--GL-YQPQGLAVDGAGTVYVTDFNN--------RVVTLAAGSNNQTVLPFDGLN----Y 109 (270)
T ss_dssp CEEEEECC------EECCCC--SC-CSCCCEEECTTCCEEEEETTT--------EEEEECTTCSCCEECCCCSCS----S
T ss_pred CcEEEecCCCc-ccceEeeC--Cc-CCcceeEECCCCCEEEEcCCC--------EEEEEeCCCceEeeeecCCcC----C
Confidence 35666766655 43322111 10 11223444 57877665433 899999988776655433211 2
Q ss_pred ceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 258 NFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 258 ~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
...+... +|.|++.... ...+.+| + .+ +..... ... ... . . ..-+++..+
T Consensus 110 p~~i~~~~~g~l~v~~~~-~~~i~~~--~-~~-~~~~~~---~~~-------------~~~------~-~-p~~i~~~~~ 160 (270)
T 1rwi_B 110 PEGLAVDTQGAVYVADRG-NNRVVKL--A-AG-SKTQTV---LPF-------------TGL------N-D-PDGVAVDNS 160 (270)
T ss_dssp EEEEEECTTCCEEEEEGG-GTEEEEE--C-TT-CCSCEE---CCC-------------CSC------C-S-CCCEEECTT
T ss_pred CcceEECCCCCEEEEECC-CCEEEEE--E-CC-CceeEe---ecc-------------ccC------C-C-ceeEEEeCC
Confidence 2334443 6787776554 4455555 2 22 111111 011 000 0 1 223456666
Q ss_pred CceEeeee-CCeEEEEeCCCCcEEE
Q 016367 337 GEILLEYA-NGALVSYNPENEELKD 360 (390)
Q Consensus 337 g~il~~~~-~~~l~~yd~~t~~~~~ 360 (390)
|.+++... ...+..||++++....
T Consensus 161 g~l~v~~~~~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 161 GNVYVTDTDNNRVVKLEAESNNQVV 185 (270)
T ss_dssp CCEEEEEGGGTEEEEECTTTCCEEE
T ss_pred CCEEEEECCCCEEEEEecCCCceEe
Confidence 77666554 4578888888776543
No 78
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=69.46 E-value=55 Score=28.27 Aligned_cols=211 Identities=9% Similarity=0.041 Sum_probs=102.9
Q ss_pred cCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEE
Q 016367 104 CNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVE 183 (390)
Q Consensus 104 ~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 183 (390)
.+|-|.+.+.. ...++++||.+++...+..... ....++.+++.. + ++.... . .......+.
T Consensus 54 ~~g~l~~~~~~-~~~i~~~d~~~~~~~~~~~~~~----~~~~~i~~~~dg-~--l~v~~~-~---------~~~~~~~i~ 115 (333)
T 2dg1_A 54 RQGQLFLLDVF-EGNIFKINPETKEIKRPFVSHK----ANPAAIKIHKDG-R--LFVCYL-G---------DFKSTGGIF 115 (333)
T ss_dssp TTSCEEEEETT-TCEEEEECTTTCCEEEEEECSS----SSEEEEEECTTS-C--EEEEEC-T---------TSSSCCEEE
T ss_pred CCCCEEEEECC-CCEEEEEeCCCCcEEEEeeCCC----CCcceEEECCCC-c--EEEEeC-C---------CCCCCceEE
Confidence 46666554431 4679999999988766532111 124577777653 2 222111 1 000123677
Q ss_pred EEEeCCCCccccc-CCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceE
Q 016367 184 VLTVGIDHTWRYL-GPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFH 260 (390)
Q Consensus 184 vyss~~~~~W~~~-~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~ 260 (390)
+|+..++ .-+.+ ..... ......+.+ +|.+|...... ........|..+|..+.++..+.-... ....
T Consensus 116 ~~d~~~~-~~~~~~~~~~~--~~~~~~i~~d~~g~l~v~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~ 186 (333)
T 2dg1_A 116 AATENGD-NLQDIIEDLST--AYCIDDMVFDSKGGFYFTDFRG-YSTNPLGGVYYVSPDFRTVTPIIQNIS-----VANG 186 (333)
T ss_dssp EECTTSC-SCEEEECSSSS--CCCEEEEEECTTSCEEEEECCC-BTTBCCEEEEEECTTSCCEEEEEEEES-----SEEE
T ss_pred EEeCCCC-EEEEEEccCcc--CCcccceEECCCCCEEEEeccc-cccCCCceEEEEeCCCCEEEEeecCCC-----cccc
Confidence 7877776 54422 11110 011122333 57665543321 000112478999988766655421100 1122
Q ss_pred EEE-eCCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEE-EEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC
Q 016367 261 LVV-LRGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKD-YIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG 337 (390)
Q Consensus 261 L~~-~~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (390)
+.. -+|+ |++.... ...+.+|-++..+ ...... ..+.. .. ..... ..-+++..+|
T Consensus 187 i~~~~dg~~l~v~~~~-~~~i~~~d~~~~g--~~~~~~~~~~~~--------------~~----~~~~~-~~~i~~d~~G 244 (333)
T 2dg1_A 187 IALSTDEKVLWVTETT-ANRLHRIALEDDG--VTIQPFGATIPY--------------YF----TGHEG-PDSCCIDSDD 244 (333)
T ss_dssp EEECTTSSEEEEEEGG-GTEEEEEEECTTS--SSEEEEEEEEEE--------------EC----CSSSE-EEEEEEBTTC
T ss_pred eEECCCCCEEEEEeCC-CCeEEEEEecCCC--cCcccccceEEE--------------ec----CCCCC-CCceEECCCC
Confidence 333 3554 6665544 5567777665322 122211 11111 00 00011 4445677778
Q ss_pred ceEeeee-CCeEEEEeCCCCcEEEEEE
Q 016367 338 EILLEYA-NGALVSYNPENEELKDLVI 363 (390)
Q Consensus 338 ~il~~~~-~~~l~~yd~~t~~~~~v~~ 363 (390)
.+++... +..+..||++.+.++.+..
T Consensus 245 ~l~v~~~~~~~v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 245 NLYVAMYGQGRVLVFNKRGYPIGQILI 271 (333)
T ss_dssp CEEEEEETTTEEEEECTTSCEEEEEEC
T ss_pred CEEEEEcCCCEEEEECCCCCEEEEEEc
Confidence 8777664 4679999997766666644
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=68.13 E-value=58 Score=27.98 Aligned_cols=192 Identities=10% Similarity=0.052 Sum_probs=98.5
Q ss_pred CceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEE
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEV 184 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~v 184 (390)
.+.+.+.... ...+.++|+.|++....-.... ... ++.++|..+ +-++. .. ....+.+
T Consensus 9 ~~~~~v~~~~-~~~v~~~d~~~~~~~~~~~~~~----~~~-~~~~s~dg~-~l~~~-~~--------------~~~~i~~ 66 (331)
T 3u4y_A 9 SNFGIVVEQH-LRRISFFSTDTLEILNQITLGY----DFV-DTAITSDCS-NVVVT-SD--------------FCQTLVQ 66 (331)
T ss_dssp CCEEEEEEGG-GTEEEEEETTTCCEEEEEECCC----CEE-EEEECSSSC-EEEEE-ES--------------TTCEEEE
T ss_pred CCEEEEEecC-CCeEEEEeCcccceeeeEEccC----Ccc-eEEEcCCCC-EEEEE-eC--------------CCCeEEE
Confidence 3444444432 5689999999988754322211 122 677777543 32222 21 1237888
Q ss_pred EEeCCCCcc--cccCCCCcccCCCC-ceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCCCCCCcceE
Q 016367 185 LTVGIDHTW--RYLGPVPWRLNPGA-SEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCGSLSVCNFH 260 (390)
Q Consensus 185 yss~~~~~W--~~~~~~p~~~~~~~-~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~ 260 (390)
++..++ .- +.+.. ...... -.+.-+|...+..... .....|..+|+.+.+... ++.... ...
T Consensus 67 ~d~~~~-~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~----~~~~~i~v~d~~~~~~~~~~~~~~~------~~~ 132 (331)
T 3u4y_A 67 IETQLE-PPKVVAIQE---GQSSMADVDITPDDQFAVTVTGL----NHPFNMQSYSFLKNKFISTIPIPYD------AVG 132 (331)
T ss_dssp EECSSS-SCEEEEEEE---CSSCCCCEEECTTSSEEEECCCS----SSSCEEEEEETTTTEEEEEEECCTT------EEE
T ss_pred EECCCC-ceeEEeccc---CCCCccceEECCCCCEEEEecCC----CCcccEEEEECCCCCeEEEEECCCC------ccc
Confidence 998888 53 11111 111111 1222346533332221 011279999998766533 333222 123
Q ss_pred EEEe-CCe-EEEEEeCCCCc-EEEEEEeeCCCCCceEEE-EEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 261 LVVL-RGC-LSAVHCLDDKG-MEIWIMKEYKVRESWSKD-YIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 261 L~~~-~G~-L~~~~~~~~~~-~~IW~l~~~~~~~~W~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
+... +|+ |++.... ... +.+|.++..+ ...... ..+.. +.. ..-+.+..+
T Consensus 133 ~~~spdg~~l~~~~~~-~~~~i~~~~~~~~g--~~~~~~~~~~~~----------------------~~~-~~~~~~spd 186 (331)
T 3u4y_A 133 IAISPNGNGLILIDRS-SANTVRRFKIDADG--VLFDTGQEFISG----------------------GTR-PFNITFTPD 186 (331)
T ss_dssp EEECTTSSCEEEEEET-TTTEEEEEEECTTC--CEEEEEEEEECS----------------------SSS-EEEEEECTT
T ss_pred eEECCCCCEEEEEecC-CCceEEEEEECCCC--cEeecCCccccC----------------------CCC-ccceEECCC
Confidence 3333 565 6665554 556 9999998532 111111 11111 111 444567778
Q ss_pred Cc-eEeeee-CCeEEEEeCCCCcE
Q 016367 337 GE-ILLEYA-NGALVSYNPENEEL 358 (390)
Q Consensus 337 g~-il~~~~-~~~l~~yd~~t~~~ 358 (390)
|+ +++... +..+..||+++++.
T Consensus 187 g~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 187 GNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp SSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCEEEEEeCCCCeEEEEECCCCcc
Confidence 87 545443 56799999998885
No 80
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=67.40 E-value=63 Score=28.11 Aligned_cols=149 Identities=11% Similarity=0.011 Sum_probs=75.2
Q ss_pred CeEEEEEeC-CCCcccccCCCCcccCCCCceEE--ECCc-EEEEEeeccCCCCCceEEEEEECC--Cceeeee----cCC
Q 016367 180 SDVEVLTVG-IDHTWRYLGPVPWRLNPGASEAL--LNGS-LHWVTMRYKNNPGPRLRIMSFDLA--EEDFGEI----GLP 249 (390)
Q Consensus 180 ~~~~vyss~-~~~~W~~~~~~p~~~~~~~~~v~--~~G~-lywl~~~~~~~~~~~~~il~fD~~--~e~~~~i----~lP 249 (390)
-.+.+|+.. ++ ..................+. -+|. +|...... ..|..||+. +.++..+ ..|
T Consensus 162 ~~v~~~~~~~~g-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-------~~v~v~~~~~~~g~~~~~~~~~~~~ 233 (347)
T 3hfq_A 162 DKVYVYNVSDAG-QLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-------SQIASLKYDTQTGAFTQLGIVKTIP 233 (347)
T ss_dssp TEEEEEEECTTS-CEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-------TEEEEEEEETTTTEEEEEEEEESSC
T ss_pred CEEEEEEECCCC-cEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-------CEEEEEEecCCCCceEEeeeeeecC
Confidence 478899998 55 55443211110000011222 3676 44433221 244445443 4555433 233
Q ss_pred CCCCCCCcceEEEE-eCCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcc
Q 016367 250 DCGSLSVCNFHLVV-LRGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGS 327 (390)
Q Consensus 250 ~~~~~~~~~~~L~~-~~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (390)
...........+.. -+|+ |++.... ...+.+|.++..+ .+..+..++. .. ..
T Consensus 234 ~~~~~~~~~~~i~~spdG~~l~v~~~~-~~~v~v~~~~~~g---~~~~~~~~~~-------------~~--------~~- 287 (347)
T 3hfq_A 234 ADYTAHNGAAAIRLSHDGHFLYVSNRG-YNTLAVFAVTADG---HLTLIQQIST-------------EG--------DF- 287 (347)
T ss_dssp TTCCSCCEEEEEEECTTSCEEEEEEET-TTEEEEEEECGGG---CEEEEEEEEC-------------SS--------SC-
T ss_pred CCCCCCCcceeEEECCCCCEEEEEeCC-CCEEEEEEECCCC---cEEEeEEEec-------------CC--------CC-
Confidence 32111111222333 3676 5555544 6789999997532 4555555554 11 11
Q ss_pred eEEEEEeeCCceEee-ee-CCeEEEE--eCCCCcEEEEE
Q 016367 328 SQVVCDWKNGEILLE-YA-NGALVSY--NPENEELKDLV 362 (390)
Q Consensus 328 ~~~~~~~~~g~il~~-~~-~~~l~~y--d~~t~~~~~v~ 362 (390)
..-+++..+|+.++. .. ++.+..| |.++++++.+.
T Consensus 288 ~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 288 PRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp CCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred cCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 344567778874444 33 3556666 88999999884
No 81
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=66.80 E-value=59 Score=27.59 Aligned_cols=58 Identities=14% Similarity=0.019 Sum_probs=36.9
Q ss_pred CCc-EEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE-eCCeEEEEEeCCCCcEEEEEE
Q 016367 213 NGS-LHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV-LRGCLSAVHCLDDKGMEIWIM 284 (390)
Q Consensus 213 ~G~-lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~IW~l 284 (390)
+|. +||..... ..|..||+.+. +..+..|... ...+.. -+|+|+++... ...+.+|-.
T Consensus 38 ~g~~l~~~~~~~-------~~i~~~~~~~~-~~~~~~~~~~-----~~~l~~~~dg~l~v~~~~-~~~i~~~d~ 97 (296)
T 3e5z_A 38 ARSAVIFSDVRQ-------NRTWAWSDDGQ-LSPEMHPSHH-----QNGHCLNKQGHLIACSHG-LRRLERQRE 97 (296)
T ss_dssp GGTEEEEEEGGG-------TEEEEEETTSC-EEEEESSCSS-----EEEEEECTTCCEEEEETT-TTEEEEECS
T ss_pred CCCEEEEEeCCC-------CEEEEEECCCC-eEEEECCCCC-----cceeeECCCCcEEEEecC-CCeEEEEcC
Confidence 465 99987654 38999999988 7666554432 223333 36888776554 456666644
No 82
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=65.86 E-value=68 Score=27.93 Aligned_cols=190 Identities=13% Similarity=0.041 Sum_probs=91.5
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+.|||..++++..+-..... ......+.+.|. +++-+.. . . .-.+.+|+..++ .+..
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~h--~~~v~~~~~~~~-~~~l~~~--~-~-------------dg~i~vwd~~~~-~~~~ 88 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKEH--NGQVTGVDWAPD-SNRIVTC--G-T-------------DRNAYVWTLKGR-TWKP 88 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEECC--SSCEEEEEEETT-TTEEEEE--E-T-------------TSCEEEEEEETT-EEEE
T ss_pred CCEEEEEeCCCCcEEeeeeecCC--CCcccEEEEeCC-CCEEEEE--c-C-------------CCeEEEEECCCC-eeee
Confidence 46788888888753222222111 113456777773 3443322 1 1 246888999888 7654
Q ss_pred cCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCce----eeeecCCCCCCCCCcceEEEEe-CCeE
Q 016367 196 LGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEED----FGEIGLPDCGSLSVCNFHLVVL-RGCL 268 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~----~~~i~lP~~~~~~~~~~~L~~~-~G~L 268 (390)
....... ...-..+.+ +|.....+... ..|..+|+.+.. ...+..+... .-..+... +|.+
T Consensus 89 ~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-------~~v~i~d~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 89 TLVILRI-NRAARCVRWAPNEKKFAVGSGS-------RVISICYFEQENDWWVCKHIKKPIRS----TVLSLDWHPNSVL 156 (372)
T ss_dssp EEECCCC-SSCEEEEEECTTSSEEEEEETT-------SSEEEEEEETTTTEEEEEEECTTCCS----CEEEEEECTTSSE
T ss_pred eEEeecC-CCceeEEEECCCCCEEEEEeCC-------CEEEEEEecCCCcceeeeeeecccCC----CeeEEEEcCCCCE
Confidence 3211111 100112222 34433333322 146666665543 2222222221 12233333 5666
Q ss_pred EEEEeCCCCcEEEEEEeeCC-----CCCceEE-------EEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 269 SAVHCLDDKGMEIWIMKEYK-----VRESWSK-------DYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 269 ~~~~~~~~~~~~IW~l~~~~-----~~~~W~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
.++... ...+.+|-+.... ....|.. +..+. ..... ..-+.+..+
T Consensus 157 l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~-v~~~~~~~~ 213 (372)
T 1k8k_C 157 LAAGSC-DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS---------------------SSCGW-VHGVCFSAN 213 (372)
T ss_dssp EEEEET-TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC---------------------CCSSC-EEEEEECSS
T ss_pred EEEEcC-CCCEEEEEcccccccccccccccccccchhhheEecC---------------------CCCCe-EEEEEECCC
Confidence 665555 7789999875211 0112221 11111 11112 555667777
Q ss_pred CceEeee-eCCeEEEEeCCCCcEEE
Q 016367 337 GEILLEY-ANGALVSYNPENEELKD 360 (390)
Q Consensus 337 g~il~~~-~~~~l~~yd~~t~~~~~ 360 (390)
+..++.. .++.+..||.++++...
T Consensus 214 ~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 214 GSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp SSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCceeE
Confidence 7655554 46679999998877543
No 83
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=64.23 E-value=69 Score=27.44 Aligned_cols=149 Identities=14% Similarity=0.071 Sum_probs=75.2
Q ss_pred CeEEEEEeCC-CCcccccC--CCCcccCCCCceEEE--CCc-EEEEEeeccCCCCCceEEEEEECC--Cceee---ee-c
Q 016367 180 SDVEVLTVGI-DHTWRYLG--PVPWRLNPGASEALL--NGS-LHWVTMRYKNNPGPRLRIMSFDLA--EEDFG---EI-G 247 (390)
Q Consensus 180 ~~~~vyss~~-~~~W~~~~--~~p~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~~il~fD~~--~e~~~---~i-~ 247 (390)
..+.+|+..+ + ...... ............+.+ +|. +|...... ..|..+|+. +.++. .+ .
T Consensus 151 ~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~-------~~i~~~~~~~~~g~~~~~~~~~~ 222 (343)
T 1ri6_A 151 DRICLFTVSDDG-HLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELN-------SSVDVWELKDPHGNIECVQTLDM 222 (343)
T ss_dssp TEEEEEEECTTS-CEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTT-------TEEEEEESSCTTSCCEEEEEEEC
T ss_pred CEEEEEEecCCC-ceeeecccccccCCCCCcceEEECCCCCEEEEEeCCC-------CEEEEEEecCCCCcEEEEeeccc
Confidence 4688999887 6 664322 110000001112333 565 44333221 378888884 34332 22 3
Q ss_pred CCCCCCCCCcceEEEEe-CCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCC
Q 016367 248 LPDCGSLSVCNFHLVVL-RGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGR 325 (390)
Q Consensus 248 lP~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (390)
+|...........+... +|+ |++.... ...+.+|.++.. ...+..+..++. ...
T Consensus 223 ~~~~~~~~~~~~~i~~s~dg~~l~v~~~~-~~~i~v~d~~~~--~~~~~~~~~~~~-------------~~~-------- 278 (343)
T 1ri6_A 223 MPENFSDTRWAADIHITPDGRHLYACDRT-ASLITVFSVSED--GSVLSKEGFQPT-------------ETQ-------- 278 (343)
T ss_dssp SCTTCCSCCCEEEEEECTTSSEEEEEETT-TTEEEEEEECTT--SCCEEEEEEEEC-------------SSS--------
T ss_pred cCccccccCCccceEECCCCCEEEEEecC-CCEEEEEEEcCC--CCceEEeeeecC-------------CCc--------
Confidence 44332111011123333 454 5444444 778999999743 234666666654 110
Q ss_pred cceEEEEEeeCCceEeeee--CCeEEEE--eCCCCcEEEEE
Q 016367 326 GSSQVVCDWKNGEILLEYA--NGALVSY--NPENEELKDLV 362 (390)
Q Consensus 326 ~~~~~~~~~~~g~il~~~~--~~~l~~y--d~~t~~~~~v~ 362 (390)
...+++..+|..++... ++.+..| |.++++++.+.
T Consensus 279 --~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 317 (343)
T 1ri6_A 279 --PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKG 317 (343)
T ss_dssp --CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEE
T ss_pred --cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEcc
Confidence 22346667777444443 4556666 88888888773
No 84
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=64.00 E-value=84 Score=28.37 Aligned_cols=147 Identities=15% Similarity=0.031 Sum_probs=74.9
Q ss_pred EeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCC
Q 016367 101 VGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKS 180 (390)
Q Consensus 101 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 180 (390)
.+..+|.|.+.+.. ...++.+++.++....+-.... ....++++|+..+...+.- . ...
T Consensus 123 ~d~~~~~ly~~D~~-~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~lY~~d----~------------~~~ 181 (386)
T 3v65_B 123 FHHRRELVFWSDVT-LDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDKLYWTD----S------------GTS 181 (386)
T ss_dssp EETTTTEEEEEETT-TTEEEEEETTSCCEEEEECSSC----SCCCCEEEETTTTEEEEEE----T------------TTT
T ss_pred EecCCCeEEEEeCC-CCcEEEEecCCCCcEEEEeCCC----CCccEEEEEeCCCeEEEEc----C------------CCC
Confidence 34457777777643 4678888888776444322110 0123677887555432221 1 123
Q ss_pred eEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 181 DVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 181 ~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
.+++++.... .-+.+.. ..+. ...++.+ +|.+||..... ...|..+|+.......+--.. .. .
T Consensus 182 ~I~~~~~dg~-~~~~l~~--~~l~-~P~giavdp~~g~ly~td~~~------~~~I~r~~~dG~~~~~~~~~~-~~---~ 247 (386)
T 3v65_B 182 RIEVANLDGA-HRKVLLW--QSLE-KPRAIALHPMEGTIYWTDWGN------TPRIEASSMDGSGRRIIADTH-LF---W 247 (386)
T ss_dssp EEEECBTTSC-SCEEEEC--SSCS-CEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCSCEEEECSS-CS---C
T ss_pred eEEEEeCCCC-ceEEeec--CCCC-CCcEEEEEcCCCeEEEeccCC------CCEEEEEeCCCCCcEEEEECC-CC---C
Confidence 5666666544 2222111 1111 1223444 58899976532 248999999765544432111 10 1
Q ss_pred ceEEEE--eCCeEEEEEeCCCCcEEEEEEe
Q 016367 258 NFHLVV--LRGCLSAVHCLDDKGMEIWIMK 285 (390)
Q Consensus 258 ~~~L~~--~~G~L~~~~~~~~~~~~IW~l~ 285 (390)
-.-|+. .+|.|+++... .. .|++.+
T Consensus 248 PnGlavd~~~~~lY~aD~~-~~--~I~~~d 274 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAK-HH--VIERAN 274 (386)
T ss_dssp EEEEEEEGGGTEEEEEETT-TT--EEEEEC
T ss_pred eeeEEEeCCCCEEEEEECC-CC--EEEEEe
Confidence 122333 47888887765 44 455554
No 85
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=63.79 E-value=74 Score=27.67 Aligned_cols=122 Identities=16% Similarity=0.137 Sum_probs=60.5
Q ss_pred cCceEEeeeccccccEEEEcCCCc--ceecccCcc----CCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCC
Q 016367 104 CNGLLCVSDALYFNPIIVCNPFTG--SYLELAKAT----QHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWP 177 (390)
Q Consensus 104 ~~GLl~~~~~~~~~~~~V~NP~T~--~~~~LP~~~----~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~ 177 (390)
.+|-|.+.+.. ...+.++|+.++ ....+.... .........++++++..+...|.-- .
T Consensus 100 ~~g~l~v~d~~-~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~---------------~ 163 (329)
T 3fvz_A 100 TDGNYWVTDVA-LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG---------------Y 163 (329)
T ss_dssp TTSCEEEEETT-TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC---------------S
T ss_pred CCCCEEEEECC-CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC---------------C
Confidence 46656555542 467889998766 333343210 0111123568889985554433320 0
Q ss_pred CCCeEEEEEeCCCCcccccCCC-------CcccCCCCceEEE--C-CcEEEEEeeccCCCCCceEEEEEECCCcee-eee
Q 016367 178 RKSDVEVLTVGIDHTWRYLGPV-------PWRLNPGASEALL--N-GSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEI 246 (390)
Q Consensus 178 ~~~~~~vyss~~~~~W~~~~~~-------p~~~~~~~~~v~~--~-G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i 246 (390)
....+.+|+. ++..-+.+... +... ....++.+ + |.+|+..... ..|..||+.+.++ ..+
T Consensus 164 ~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~-~~p~gia~d~~~g~l~v~d~~~-------~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 164 CNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQF-SVPHSLALVPHLDQLCVADREN-------GRIQCFKTDTKEFVREI 234 (329)
T ss_dssp SCCEEEEECT-TSCEEEEECEECCSSSCCTTEE-SCEEEEEEETTTTEEEEEETTT-------TEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEcC-CCCEEEEeccCCCCCCCCCccc-CCCcEEEEECCCCEEEEEECCC-------CEEEEEECCCCcEEEEE
Confidence 1246777773 33122222110 0111 11234555 4 7777665432 3899999985444 455
Q ss_pred cCCC
Q 016367 247 GLPD 250 (390)
Q Consensus 247 ~lP~ 250 (390)
..+.
T Consensus 235 ~~~~ 238 (329)
T 3fvz_A 235 KHAS 238 (329)
T ss_dssp CCTT
T ss_pred eccc
Confidence 5553
No 86
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=63.24 E-value=76 Score=27.64 Aligned_cols=94 Identities=10% Similarity=0.119 Sum_probs=53.3
Q ss_pred EEEEEECCCceeeeecCCCCCCCCCcceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccC
Q 016367 232 RIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLREN 310 (390)
Q Consensus 232 ~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 310 (390)
.|..+|+.+.+.... +..+.. .-..+... +|.+.+.... +..+.||-+... .....+.-
T Consensus 165 ~i~~wd~~~~~~~~~-~~~h~~---~v~~~~~~~~~~~l~sg~~-d~~v~~wd~~~~------~~~~~~~~--------- 224 (340)
T 1got_B 165 TCALWDIETGQQTTT-FTGHTG---DVMSLSLAPDTRLFVSGAC-DASAKLWDVREG------MCRQTFTG--------- 224 (340)
T ss_dssp CEEEEETTTTEEEEE-ECCCSS---CEEEEEECTTSSEEEEEET-TSCEEEEETTTC------SEEEEECC---------
T ss_pred cEEEEECCCCcEEEE-EcCCCC---ceEEEEECCCCCEEEEEeC-CCcEEEEECCCC------eeEEEEcC---------
Confidence 688899887654332 111111 12233332 5666665555 789999987631 12333322
Q ss_pred cCcchhhhhccCCCCcceEEEEEeeCCceEeeee-CCeEEEEeCCCCcE
Q 016367 311 ARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA-NGALVSYNPENEEL 358 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-~~~l~~yd~~t~~~ 358 (390)
. ... +.-+++.+++..++... ++.+..||+++++.
T Consensus 225 ----h--------~~~-v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 225 ----H--------ESD-INAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp ----C--------SSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred ----C--------cCC-EEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 1 111 55567777777666554 56799999987654
No 87
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=62.37 E-value=85 Score=27.86 Aligned_cols=189 Identities=7% Similarity=-0.121 Sum_probs=90.6
Q ss_pred cccEEEEcCCCcc------eecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCC
Q 016367 116 FNPIIVCNPFTGS------YLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGI 189 (390)
Q Consensus 116 ~~~~~V~NP~T~~------~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~ 189 (390)
...+.+||..+++ ......... ........+.+.+..+.+-+.. . ..-.+.+|+.++
T Consensus 135 dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~-~---------------~dg~v~iwd~~~ 197 (416)
T 2pm9_A 135 NGEIFIWDMNKCTESPSNYTPLTPGQSM-SSVDEVISLAWNQSLAHVFASA-G---------------SSNFASIWDLKA 197 (416)
T ss_dssp SSCEEBCBTTTTSSCTTTCCCBCCCCSC-CSSCCCCEEEECSSCTTEEEEE-S---------------SSSCEEEEETTT
T ss_pred CCeEEEEECCCCcccccccccccccccc-CCCCCeeEEEeCCCCCcEEEEE-c---------------CCCCEEEEECCC
Confidence 5789999998876 221111100 0111234667776544443332 1 124688899888
Q ss_pred CCcccccCCCCccc---CCCCceEEE--CC-cEEEEEeeccCCCCCceEEEEEECCCceeeeecCC-CCCCCCCcceEEE
Q 016367 190 DHTWRYLGPVPWRL---NPGASEALL--NG-SLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLP-DCGSLSVCNFHLV 262 (390)
Q Consensus 190 ~~~W~~~~~~p~~~---~~~~~~v~~--~G-~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP-~~~~~~~~~~~L~ 262 (390)
+ .-...-...... ...-..+.+ +| .+...+..+ .....|..+|+.+..-....+. .+.. .-..+.
T Consensus 198 ~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----~~~~~i~~~d~~~~~~~~~~~~~~~~~---~v~~~~ 269 (416)
T 2pm9_A 198 K-KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS----DNDPSILIWDLRNANTPLQTLNQGHQK---GILSLD 269 (416)
T ss_dssp T-EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC----SSSCCCCEEETTSTTSCSBCCCSCCSS---CEEEEE
T ss_pred C-CcceEEeccccccccCCceEEEEECCCCCCEEEEEECC----CCCceEEEEeCCCCCCCcEEeecCccC---ceeEEE
Confidence 7 432211111000 111122333 23 233333322 0011677888876421111222 1111 223333
Q ss_pred Ee--CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC-ce
Q 016367 263 VL--RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG-EI 339 (390)
Q Consensus 263 ~~--~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~i 339 (390)
.. +|.+.+.... +..+.||-++. ...+..+.. ... . ..-+.+..++ .+
T Consensus 270 ~s~~~~~~l~s~~~-dg~v~~wd~~~------~~~~~~~~~-------------~~~--------~-v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 270 WCHQDEHLLLSSGR-DNTVLLWNPES------AEQLSQFPA-------------RGN--------W-CFKTKFAPEAPDL 320 (416)
T ss_dssp ECSSCSSCEEEEES-SSEEEEECSSS------CCEEEEEEC-------------SSS--------C-CCCEEECTTCTTE
T ss_pred eCCCCCCeEEEEeC-CCCEEEeeCCC------CccceeecC-------------CCC--------c-eEEEEECCCCCCE
Confidence 33 5666665555 77899998763 123444443 110 1 3345666666 56
Q ss_pred Eeee-eCCeEEEEeCCCCcE
Q 016367 340 LLEY-ANGALVSYNPENEEL 358 (390)
Q Consensus 340 l~~~-~~~~l~~yd~~t~~~ 358 (390)
++.. .++.+..||+++.+.
T Consensus 321 l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EEECCSSSEEEEEESCCCCC
T ss_pred EEEEecCCcEEEEEccCCCC
Confidence 5554 466799999987653
No 88
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=62.24 E-value=76 Score=27.29 Aligned_cols=59 Identities=12% Similarity=0.024 Sum_probs=35.9
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE-eCCeEEEEEeCCCCcEEEEEEe
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV-LRGCLSAVHCLDDKGMEIWIMK 285 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~IW~l~ 285 (390)
+|.+||..... ..|..||..++....+..+.. -..+.. -+|+|+++... .....|+.+.
T Consensus 42 ~g~lyv~d~~~-------~~I~~~d~~g~~~~~~~~~~~------p~gia~~~dG~l~vad~~-~~~~~v~~~d 101 (306)
T 2p4o_A 42 DGTIFVTNHEV-------GEIVSITPDGNQQIHATVEGK------VSGLAFTSNGDLVATGWN-ADSIPVVSLV 101 (306)
T ss_dssp TSCEEEEETTT-------TEEEEECTTCCEEEEEECSSE------EEEEEECTTSCEEEEEEC-TTSCEEEEEE
T ss_pred CCCEEEEeCCC-------CeEEEECCCCceEEEEeCCCC------ceeEEEcCCCcEEEEecc-CCcceEEEEc
Confidence 68899886432 379999998765454555432 123333 36888876543 3345666665
No 89
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=62.12 E-value=67 Score=26.57 Aligned_cols=189 Identities=12% Similarity=0.072 Sum_probs=96.4
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
..+|-+.+.+. ...++++||.++....++.... ....++.+|+.. . +..... . ...+
T Consensus 75 ~~~g~l~v~~~--~~~i~~~d~~~~~~~~~~~~~~----~~p~~i~~~~~g-~--l~v~~~-~-------------~~~i 131 (270)
T 1rwi_B 75 DGAGTVYVTDF--NNRVVTLAAGSNNQTVLPFDGL----NYPEGLAVDTQG-A--VYVADR-G-------------NNRV 131 (270)
T ss_dssp CTTCCEEEEET--TTEEEEECTTCSCCEECCCCSC----SSEEEEEECTTC-C--EEEEEG-G-------------GTEE
T ss_pred CCCCCEEEEcC--CCEEEEEeCCCceEeeeecCCc----CCCcceEECCCC-C--EEEEEC-C-------------CCEE
Confidence 33566655554 4679999998887665543211 124577888743 2 222211 1 2356
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceE
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFH 260 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~ 260 (390)
.+|+.++. ....... .... ...++.+ +|.+|+..... ..|..||..+............ .-..
T Consensus 132 ~~~~~~~~-~~~~~~~--~~~~-~p~~i~~~~~g~l~v~~~~~-------~~i~~~~~~~~~~~~~~~~~~~----~p~~ 196 (270)
T 1rwi_B 132 VKLAAGSK-TQTVLPF--TGLN-DPDGVAVDNSGNVYVTDTDN-------NRVVKLEAESNNQVVLPFTDIT----APWG 196 (270)
T ss_dssp EEECTTCC-SCEECCC--CSCC-SCCCEEECTTCCEEEEEGGG-------TEEEEECTTTCCEEECCCSSCC----SEEE
T ss_pred EEEECCCc-eeEeecc--ccCC-CceeEEEeCCCCEEEEECCC-------CEEEEEecCCCceEeecccCCC----CceE
Confidence 66654444 3322111 1111 1223444 58876654432 3899999987765443222111 2233
Q ss_pred EEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCce
Q 016367 261 LVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEI 339 (390)
Q Consensus 261 L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 339 (390)
+... +|.|++.... ...+.+|-.+. .... .+.. ... .. ..-+++..+|.+
T Consensus 197 i~~d~~g~l~v~~~~-~~~v~~~~~~~---~~~~----~~~~-------------~~~-------~~-p~~i~~~~~g~l 247 (270)
T 1rwi_B 197 IAVDEAGTVYVTEHN-TNQVVKLLAGS---TTST----VLPF-------------TGL-------NT-PLAVAVDSDRTV 247 (270)
T ss_dssp EEECTTCCEEEEETT-TSCEEEECTTC---SCCE----ECCC-------------CSC-------SC-EEEEEECTTCCE
T ss_pred EEECCCCCEEEEECC-CCcEEEEcCCC---Ccce----eecc-------------CCC-------CC-ceeEEECCCCCE
Confidence 4443 5677776654 45555554432 1111 1111 010 11 444567677877
Q ss_pred Eeeee-CCeEEEEeCCCCcE
Q 016367 340 LLEYA-NGALVSYNPENEEL 358 (390)
Q Consensus 340 l~~~~-~~~l~~yd~~t~~~ 358 (390)
++... +..+..|++..++.
T Consensus 248 ~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 248 YVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEEGGGTEEEEECCCGGGS
T ss_pred EEEECCCCEEEEEcCCCccc
Confidence 77654 56789998886653
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=61.82 E-value=78 Score=27.26 Aligned_cols=204 Identities=10% Similarity=-0.056 Sum_probs=0.0
Q ss_pred ecCceEEeeeccccccEEEEcCCCcc-eecccCccCCCCcceEEEEEEec-CCCCeEEEEEEEeccccccccCCCCCCCC
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGS-YLELAKATQHAQEELAFGFGCNS-STMEYKVVRIVFNFNTYRSLRDRGWPRKS 180 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~-~~~LP~~~~~~~~~~~~~~~~d~-~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 180 (390)
+.+|-.++.... ...+.+||..+++ ....-.............+.+.+ -..+-+.+.....+ -
T Consensus 126 s~~~~~l~~~~~-d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--------------~ 190 (357)
T 3i2n_A 126 GEGAPEIVTGSR-DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN--------------G 190 (357)
T ss_dssp C-CCCEEEEEET-TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT--------------S
T ss_pred CCCccEEEEEeC-CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC--------------C
Q ss_pred eEEEEEeCCCCcccccCCCCcccCCCCceEEE----CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecC-----CCC
Q 016367 181 DVEVLTVGIDHTWRYLGPVPWRLNPGASEALL----NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGL-----PDC 251 (390)
Q Consensus 181 ~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~----~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~l-----P~~ 251 (390)
.+.+|+.+++ .=.......... ....+. +|.....+..+ ..|..+|+.+.+....-. ...
T Consensus 191 ~i~i~d~~~~-~~~~~~~~~~~v---~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~ 259 (357)
T 3i2n_A 191 DIKLFDLRNM-ALRWETNIKNGV---CSLEFDRKDISMNKLVATSLE-------GKFHVFDMRTQHPTKGFASVSEKAHK 259 (357)
T ss_dssp EEEEEETTTT-EEEEEEECSSCE---EEEEESCSSSSCCEEEEEEST-------TEEEEEEEEEEETTTEEEEEEEECCS
T ss_pred eEEEEECccC-ceeeecCCCCce---EEEEcCCCCCCCCEEEEECCC-------CeEEEEeCcCCCcccceeeeccCCCc
Q ss_pred CCCCCcceEEEEeCCe-EEEEEeCCCCcEEEEEEeeCCCCC-------------ceEEEEEEccCCCcccccCcCcchhh
Q 016367 252 GSLSVCNFHLVVLRGC-LSAVHCLDDKGMEIWIMKEYKVRE-------------SWSKDYIIGTYLPASLRENARPHLEM 317 (390)
Q Consensus 252 ~~~~~~~~~L~~~~G~-L~~~~~~~~~~~~IW~l~~~~~~~-------------~W~~~~~i~~~~~~~~~~~~~~~~~~ 317 (390)
.. -......-+|. +.+.... +..+.||-++...... .+..+..+.. ...
T Consensus 260 ~~---v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------------~~~ 322 (357)
T 3i2n_A 260 ST---VWQVRHLPQNRELFLTAGG-AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL-------------STQ 322 (357)
T ss_dssp SC---EEEEEEETTEEEEEEEEET-TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC-------------CSS
T ss_pred CC---EEEEEECCCCCcEEEEEeC-CCcEEEeecCCCcccccccCCCCccccccccceeecccc-------------CCC
Q ss_pred hhccCCCCcceEEEEEeeCCceEe--eeeCCeEEEEeCCCCcE
Q 016367 318 LKKSGLGRGSSQVVCDWKNGEILL--EYANGALVSYNPENEEL 358 (390)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~g~il~--~~~~~~l~~yd~~t~~~ 358 (390)
. +.-+.+..+|..++ ...++.+..||+++...
T Consensus 323 ~---------v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 323 P---------ISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp C---------EEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred C---------eeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
No 91
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=61.57 E-value=1.1e+02 Score=29.00 Aligned_cols=149 Identities=13% Similarity=0.069 Sum_probs=77.1
Q ss_pred CceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEE
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEV 184 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~v 184 (390)
+++++.... .....+||..|++...+...+. ..+.++|. +++-+..... . .....+.+
T Consensus 122 ~~~~~~s~~--~~~~~l~d~~~g~~~~l~~~~~-------~~~~~spD-G~~la~~~~~-~-----------~~~~~i~~ 179 (582)
T 3o4h_A 122 EAVVFTGAT--EDRVALYALDGGGLRELARLPG-------FGFVSDIR-GDLIAGLGFF-G-----------GGRVSLFT 179 (582)
T ss_dssp SCEEEEEEC--SSCEEEEEEETTEEEEEEEESS-------CEEEEEEE-TTEEEEEEEE-E-----------TTEEEEEE
T ss_pred CeEEEEecC--CCCceEEEccCCcEEEeecCCC-------ceEEECCC-CCEEEEEEEc-C-----------CCCeEEEE
Confidence 346665554 3456699999998777654322 24556664 3444333221 1 11245888
Q ss_pred EEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc---ceEE
Q 016367 185 LTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC---NFHL 261 (390)
Q Consensus 185 yss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~---~~~L 261 (390)
++..++ .++.+...+... ......-+|...+..... ....|..+|+.+.+...+.-......... ....
T Consensus 180 ~d~~~g-~~~~l~~~~~~~--~~~~~SpDG~~l~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (582)
T 3o4h_A 180 SNLSSG-GLRVFDSGEGSF--SSASISPGMKVTAGLETA-----REARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWL 251 (582)
T ss_dssp EETTTC-CCEEECCSSCEE--EEEEECTTSCEEEEEECS-----SCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEE
T ss_pred EcCCCC-CceEeecCCCcc--ccceECCCCCEEEEccCC-----CeeEEEEEcCCCCcEEEccCCCcChhhhhhccccce
Confidence 888888 887664322111 011222367654432222 12479999998877762222111100000 0000
Q ss_pred -EEeCCeEEEEEeCCCCcEEEEEE
Q 016367 262 -VVLRGCLSAVHCLDDKGMEIWIM 284 (390)
Q Consensus 262 -~~~~G~L~~~~~~~~~~~~IW~l 284 (390)
..-+|++++.... ...+.||.+
T Consensus 252 ~~spdg~~~~~~~~-~g~~~l~~~ 274 (582)
T 3o4h_A 252 GYLPDGRLAVVARR-EGRSAVFID 274 (582)
T ss_dssp EECTTSCEEEEEEE-TTEEEEEET
T ss_pred eEcCCCcEEEEEEc-CCcEEEEEE
Confidence 2346777775554 668999988
No 92
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=61.16 E-value=98 Score=28.18 Aligned_cols=212 Identities=10% Similarity=0.014 Sum_probs=101.9
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
..+|-|.+.+.. ...+.++++.+++...+...... .. +++++..+ + ++... . .....+
T Consensus 139 d~~g~lyv~d~~-~~~I~~id~~~g~~~~~~~~~~~-----~~-ia~~~~g~-~-l~~~d--~-----------~~~~~I 196 (409)
T 3hrp_A 139 VGNNTVLAYQRD-DPRVRLISVDDNKVTTVHPGFKG-----GK-PAVTKDKQ-R-VYSIG--W-----------EGTHTV 196 (409)
T ss_dssp CSTTEEEEEETT-TTEEEEEETTTTEEEEEEETCCB-----CB-CEECTTSS-E-EEEEB--S-----------STTCEE
T ss_pred eCCCCEEEEecC-CCcEEEEECCCCEEEEeeccCCC-----Cc-eeEecCCC-c-EEEEe--c-----------CCCceE
Confidence 356766666542 46799999999887766443211 11 55666543 2 22211 1 111267
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcc
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCN 258 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~ 258 (390)
.+++..++...+.+...+........++.+ +|.+|+ +... ..|..+|+.+.....+ ..+...... ..
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~-------~~I~~~d~~~~~~~~~~~~~~~g~~~-~~ 267 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSN-------KNFGRFNVKTQEVTLIKQLELSGSLG-TN 267 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTT-------CEEEEEETTTCCEEEEEECCCCSCCC-CS
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECC-------CcEEEEECCCCCEEEEecccccCCCC-CC
Confidence 777766541112221111101111123333 688988 3322 2899999987766555 111111111 12
Q ss_pred -e-EEEEe--CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEe
Q 016367 259 -F-HLVVL--RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDW 334 (390)
Q Consensus 259 -~-~L~~~--~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
. .+... +|.|+++... ... |++++..+ . ....+...-..+.. .. ......-.. ..-+++.
T Consensus 268 P~~~ia~~p~~g~lyv~d~~-~~~--I~~~~~~g---~--~~~~~g~~~~~g~~------dg-~~~~~~~~~-P~gia~d 331 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQN-LSS--VYKITPDG---E--CEWFCGSATQKTVQ------DG-LREEALFAQ-PNGMTVD 331 (409)
T ss_dssp SCCEEEEETTTTEEEEEETT-TTE--EEEECTTC---C--EEEEEECTTCCSCB------CE-EGGGCBCSS-EEEEEEC
T ss_pred ccccEEEeCCCCEEEEEeCC-CCE--EEEEecCC---C--EEEEEeCCCCCCcC------CC-cccccEeCC-CeEEEEe
Confidence 1 45544 5888887665 444 44444222 1 11112210000000 00 000000112 4445677
Q ss_pred eCCceEeeee--CCeEEEEeCCCCcEEEE
Q 016367 335 KNGEILLEYA--NGALVSYNPENEELKDL 361 (390)
Q Consensus 335 ~~g~il~~~~--~~~l~~yd~~t~~~~~v 361 (390)
.+|.+++... ...+..+|+.++++..+
T Consensus 332 ~dG~lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 332 EDGNFYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp TTCCEEEEETTTTCEEEEEETTTTEEEEE
T ss_pred CCCCEEEEeCCCCCEEEEEECCCCEEEEE
Confidence 7888777654 45799999888887666
No 93
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=61.11 E-value=93 Score=27.94 Aligned_cols=56 Identities=11% Similarity=0.016 Sum_probs=37.8
Q ss_pred EEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc-eEeeee--CCeEEEEeCCC
Q 016367 279 MEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE-ILLEYA--NGALVSYNPEN 355 (390)
Q Consensus 279 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~~~--~~~l~~yd~~t 355 (390)
=+||+.+ ......+.+|+. ... ...+.+..+|+ +++... ++.+..||.+|
T Consensus 298 ~~V~VID----~~t~~vv~~i~~-------------g~~----------p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 298 KEVTSVT----GLVGQTSSQISL-------------GHD----------VDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred CeEEEEE----CCCCEEEEEEEC-------------CCC----------cCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 4788887 345677778876 211 33456777887 555543 56799999999
Q ss_pred CcEEEE
Q 016367 356 EELKDL 361 (390)
Q Consensus 356 ~~~~~v 361 (390)
++..+.
T Consensus 351 ~~vv~~ 356 (373)
T 2mad_H 351 GDQDQS 356 (373)
T ss_pred CCEEee
Confidence 887654
No 94
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=60.70 E-value=84 Score=27.29 Aligned_cols=169 Identities=9% Similarity=0.022 Sum_probs=83.8
Q ss_pred EEeecCceEEeeeccccccEEEEcCCCcceecccCccC-----CCCcceEEEEEEecCCCCeEEEEEEEeccccccccCC
Q 016367 100 VVGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQ-----HAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDR 174 (390)
Q Consensus 100 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~-----~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~ 174 (390)
.+++.+|.+.+.+......+.++++..+....+..... ........++++|+..+...|.- .
T Consensus 149 a~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d----~--------- 215 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD----R--------- 215 (329)
T ss_dssp EECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE----T---------
T ss_pred EEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE----C---------
Confidence 34444788877774225788899965544444432211 01112355888898655433332 1
Q ss_pred CCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCC
Q 016367 175 GWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSL 254 (390)
Q Consensus 175 ~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~ 254 (390)
...++.+|+..++ .....-..+..........+..|.+|...............|..+|+.+.+....-.+.....
T Consensus 216 ---~~~~I~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~ 291 (329)
T 3fvz_A 216 ---ENGRIQCFKTDTK-EFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHF 291 (329)
T ss_dssp ---TTTEEEEEETTTC-CEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCC
T ss_pred ---CCCEEEEEECCCC-cEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCcc
Confidence 1357999999877 543321111100000111122244444332211111122478899987776654421111111
Q ss_pred CCcceEEEE-eCCeEEEEEeCCCCcEEEEEEeeC
Q 016367 255 SVCNFHLVV-LRGCLSAVHCLDDKGMEIWIMKEY 287 (390)
Q Consensus 255 ~~~~~~L~~-~~G~L~~~~~~~~~~~~IW~l~~~ 287 (390)
. .-..+.. -+|.|++.... ..+|.+|.++..
T Consensus 292 ~-~p~~ia~~~dG~lyvad~~-~~~I~~~~~~~~ 323 (329)
T 3fvz_A 292 D-MPHDIVASEDGTVYIGDAH-TNTVWKFTLTEK 323 (329)
T ss_dssp S-SEEEEEECTTSEEEEEESS-SCCEEEEEEEEC
T ss_pred C-CeeEEEECCCCCEEEEECC-CCEEEEEeCCcc
Confidence 0 1223343 36788887766 778999988753
No 95
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=60.19 E-value=86 Score=27.22 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=63.7
Q ss_pred EEEEEECCCceeeee-cCCCCCCCCCcceEEEEe-C--CeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCccc
Q 016367 232 RIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVL-R--GCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASL 307 (390)
Q Consensus 232 ~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~-~--G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~ 307 (390)
.|..+|+.+++...+ .+..+.. .-..+... + |.+.+.... +..+.||-++. ..|.....+..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~l~s~~~-dg~v~iwd~~~----~~~~~~~~~~~------ 99 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEG---PVWRVDWAHPKFGTILASCSY-DGKVLIWKEEN----GRWSQIAVHAV------ 99 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSS---CEEEEEECCGGGCSEEEEEET-TSCEEEEEEET----TEEEEEEEECC------
T ss_pred cEEEEecCCCcceeeeEecCCCC---cEEEEEeCCCCCCCEEEEecc-CCEEEEEEcCC----CceeEeeeecC------
Confidence 577777765554443 2222221 12233332 2 666665555 77899999983 35666655543
Q ss_pred ccCcCcchhhhhccCCCCcceEEEEEeeC--CceEeee-eCCeEEEEeCCCCcE-EEEEEeCCCCceEEEeeec
Q 016367 308 RENARPHLEMLKKSGLGRGSSQVVCDWKN--GEILLEY-ANGALVSYNPENEEL-KDLVIFDPPKWFCSIVHVE 377 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~il~~~-~~~~l~~yd~~t~~~-~~v~~~~~~~~~~~~~y~~ 377 (390)
.. .. +.-+.+..+ +..++.. .++.+..||++++.. ..+.+.+.......+.+.+
T Consensus 100 -------~~--------~~-v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~ 157 (379)
T 3jrp_A 100 -------HS--------AS-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 157 (379)
T ss_dssp -------CS--------SC-EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECC
T ss_pred -------CC--------cc-eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcC
Confidence 11 11 555666666 6655544 467799999998743 3334444444444444443
No 96
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=60.08 E-value=87 Score=27.24 Aligned_cols=32 Identities=19% Similarity=0.128 Sum_probs=23.2
Q ss_pred eEEEEEeeCCceEee-eeCCeEEEEeCCCCcEE
Q 016367 328 SQVVCDWKNGEILLE-YANGALVSYNPENEELK 359 (390)
Q Consensus 328 ~~~~~~~~~g~il~~-~~~~~l~~yd~~t~~~~ 359 (390)
+.-+.+.++|.++.. ..++.+..||+++++..
T Consensus 173 i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 173 YSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 444567777877766 45677999999988765
No 97
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=59.87 E-value=82 Score=26.88 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=30.4
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE-eCCeEEEEE
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV-LRGCLSAVH 272 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~~~ 272 (390)
+|.+||..... ..|..+|+.+.+...+..|... ..+.. -+|+|.+..
T Consensus 24 ~~~l~~~d~~~-------~~i~~~d~~~~~~~~~~~~~~~------~~i~~~~dG~l~v~~ 71 (297)
T 3g4e_A 24 SNSLLFVDIPA-------KKVCRWDSFTKQVQRVTMDAPV------SSVALRQSGGYVATI 71 (297)
T ss_dssp TTEEEEEETTT-------TEEEEEETTTCCEEEEECSSCE------EEEEEBTTSSEEEEE
T ss_pred CCEEEEEECCC-------CEEEEEECCCCcEEEEeCCCce------EEEEECCCCCEEEEE
Confidence 47899986543 3899999998877777665432 22333 356766543
No 98
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=58.71 E-value=1e+02 Score=27.51 Aligned_cols=185 Identities=10% Similarity=-0.024 Sum_probs=89.8
Q ss_pred cccEEEEcCCCccee--cccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcc
Q 016367 116 FNPIIVCNPFTGSYL--ELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTW 193 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W 193 (390)
.+.+.|||..+.... .++.... .......+.++|..+++-+.+ . . .-.+.+|+..++ ..
T Consensus 56 ~g~i~v~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~--s-~-------------dg~v~vw~~~~~-~~ 116 (402)
T 2aq5_A 56 GGAFLVLPLGKTGRVDKNVPLVCG--HTAPVLDIAWCPHNDNVIASG--S-E-------------DCTVMVWEIPDG-GL 116 (402)
T ss_dssp SCCEEEEETTCCEECCTTCCCBCC--CSSCEEEEEECTTCTTEEEEE--E-T-------------TSEEEEEECCTT-CC
T ss_pred CCEEEEEECccCCCCCCCCceEec--CCCCEEEEEeCCCCCCEEEEE--e-C-------------CCeEEEEEccCC-CC
Confidence 567888886443221 1121111 112456788887545544433 1 1 246899999887 54
Q ss_pred cccC-CCCccc---CCCCceEEE--CC-cEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCCCCCCcceEEEEe-
Q 016367 194 RYLG-PVPWRL---NPGASEALL--NG-SLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCGSLSVCNFHLVVL- 264 (390)
Q Consensus 194 ~~~~-~~p~~~---~~~~~~v~~--~G-~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~L~~~- 264 (390)
.... ...... ...-..+.+ +| .+...+..+ ..|..+|+.+.+... +....+.. .-..+...
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~~ 186 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-------NVILVWDVGTGAAVLTLGPDVHPD---TIYSVDWSR 186 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-------SCEEEEETTTTEEEEEECTTTCCS---CEEEEEECT
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-------CEEEEEECCCCCccEEEecCCCCC---ceEEEEECC
Confidence 3211 100011 000112333 23 233322221 268899998765533 22122211 12233332
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEE-ccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeee
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYII-GTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY 343 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~ 343 (390)
+|.+.++... +..+.||-++. ......+ .. .. +.. ..-+.+..++.++...
T Consensus 187 ~~~~l~~~~~-d~~i~iwd~~~------~~~~~~~~~~-------------~~-------~~~-~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 187 DGALICTSCR-DKRVRVIEPRK------GTVVAEKDRP-------------HE-------GTR-PVHAVFVSEGKILTTG 238 (402)
T ss_dssp TSSCEEEEET-TSEEEEEETTT------TEEEEEEECS-------------SC-------SSS-CCEEEECSTTEEEEEE
T ss_pred CCCEEEEEec-CCcEEEEeCCC------CceeeeeccC-------------CC-------CCc-ceEEEEcCCCcEEEEe
Confidence 5666665555 77899998763 1233444 21 00 001 2234455677766664
Q ss_pred ----eCCeEEEEeCCCCc
Q 016367 344 ----ANGALVSYNPENEE 357 (390)
Q Consensus 344 ----~~~~l~~yd~~t~~ 357 (390)
.++.+..||+++.+
T Consensus 239 ~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLE 256 (402)
T ss_dssp ECTTCCEEEEEEETTBCS
T ss_pred ccCCCCceEEEEcCcccc
Confidence 45678899988754
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=57.76 E-value=1e+02 Score=27.40 Aligned_cols=202 Identities=11% Similarity=0.017 Sum_probs=99.9
Q ss_pred CceEEeeeccccccEEEEcCCCcceeccc-Cc-cCC-CCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCe
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYLELA-KA-TQH-AQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSD 181 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP-~~-~~~-~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 181 (390)
+|-+++.... ...+.|||..+++...-. .+ ... ........+.++|....+-+.+ . . ...
T Consensus 93 ~~~~l~s~s~-dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~-~--~-------------dg~ 155 (402)
T 2aq5_A 93 NDNVIASGSE-DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSA-G--C-------------DNV 155 (402)
T ss_dssp CTTEEEEEET-TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEE-E--T-------------TSC
T ss_pred CCCEEEEEeC-CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEE-c--C-------------CCE
Confidence 4444433321 567999998887532110 00 000 0112345677777543333322 1 1 246
Q ss_pred EEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeee-e-cCCCCCCCCCc
Q 016367 182 VEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-I-GLPDCGSLSVC 257 (390)
Q Consensus 182 ~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i-~lP~~~~~~~~ 257 (390)
+.+++..++ .....-.. ......-..+.+ +|.....+..+ ..|..+|+.+.+... + ...... .
T Consensus 156 i~iwd~~~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~----~ 222 (402)
T 2aq5_A 156 ILVWDVGTG-AAVLTLGP-DVHPDTIYSVDWSRDGALICTSCRD-------KRVRVIEPRKGTVVAEKDRPHEGT----R 222 (402)
T ss_dssp EEEEETTTT-EEEEEECT-TTCCSCEEEEEECTTSSCEEEEETT-------SEEEEEETTTTEEEEEEECSSCSS----S
T ss_pred EEEEECCCC-CccEEEec-CCCCCceEEEEECCCCCEEEEEecC-------CcEEEEeCCCCceeeeeccCCCCC----c
Confidence 889998887 44321100 011111122333 45544333322 389999998765433 2 222221 1
Q ss_pred ceEEE-EeCCeEEEEEe--CCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEe
Q 016367 258 NFHLV-VLRGCLSAVHC--LDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDW 334 (390)
Q Consensus 258 ~~~L~-~~~G~L~~~~~--~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
...+. .-+|.+.++.. ..+..+.||-+.... .=.....++. ... ...+.+.
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~---~~~~~~~~~~----------------------~~~-v~~~~~s 276 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE---EPLSLQELDT----------------------SSG-VLLPFFD 276 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS---SCSEEEECCC----------------------CSS-CEEEEEE
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc---CCceEEeccC----------------------CCc-eeEEEEc
Confidence 12222 23677666552 227899999887532 1011122221 111 4445677
Q ss_pred eCCceEee-e-eCCeEEEEeCCCCc--EEEEE
Q 016367 335 KNGEILLE-Y-ANGALVSYNPENEE--LKDLV 362 (390)
Q Consensus 335 ~~g~il~~-~-~~~~l~~yd~~t~~--~~~v~ 362 (390)
.++..++. . .++.+..||+++++ +..+.
T Consensus 277 ~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 277 PDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp TTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred CCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 77776654 3 36679999999988 66663
No 100
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=57.73 E-value=1.6e+02 Score=29.43 Aligned_cols=143 Identities=9% Similarity=0.010 Sum_probs=72.8
Q ss_pred eEEEEEeCCCCcccccCCCCc-cc-CCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 016367 181 DVEVLTVGIDHTWRYLGPVPW-RL-NPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSV 256 (390)
Q Consensus 181 ~~~vyss~~~~~W~~~~~~p~-~~-~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 256 (390)
.+..|+..++ .|+.....+. .. ...-.++.. +|. .|++..+ ..+..||..+.++..+..+......
T Consensus 470 Gl~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~-------~Gl~~~~~~~~~~~~~~~~~~l~~~- 539 (781)
T 3v9f_A 470 GVFVIDLASK-KVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFG-------GGVGIYTPDMQLVRKFNQYEGFCSN- 539 (781)
T ss_dssp EEEEEESSSS-SCCEEECTTTSSCSCSCEEEEEECTTCC-EEEEESS-------SCEEEECTTCCEEEEECTTTTCSCS-
T ss_pred ceEEEeCCCC-eEEecccCcccccccceeEEEEEcCCCC-EEEEEcC-------CCEEEEeCCCCeEEEccCCCCCCCC-
Confidence 5778888888 8876543221 11 111123333 354 4666652 1688999999998887544333211
Q ss_pred cceEEEE-eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee
Q 016367 257 CNFHLVV-LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK 335 (390)
Q Consensus 257 ~~~~L~~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
....+.+ .+|.|.+.... .+ |..++.. +..+.. ... ...++ ... +.-+...+
T Consensus 540 ~i~~i~~d~~g~lWi~T~~---Gl-v~~~d~~--~~~~~~---~~~------------~~gl~----~~~--i~~i~~d~ 592 (781)
T 3v9f_A 540 TINQIYRSSKGQMWLATGE---GL-VCFPSAR--NFDYQV---FQR------------KEGLP----NTH--IRAISEDK 592 (781)
T ss_dssp CEEEEEECTTSCEEEEETT---EE-EEESCTT--TCCCEE---ECG------------GGTCS----CCC--CCEEEECS
T ss_pred eeEEEEECCCCCEEEEECC---Cc-eEEECCC--CCcEEE---ccc------------cCCCC----Cce--EEEEEECC
Confidence 2233333 35666664332 11 0222211 222221 111 01221 111 33344455
Q ss_pred CCceEeeeeCCeEEEEeCCCCcEEEE
Q 016367 336 NGEILLEYANGALVSYNPENEELKDL 361 (390)
Q Consensus 336 ~g~il~~~~~~~l~~yd~~t~~~~~v 361 (390)
+|.|.+.. ..++..||+++++++..
T Consensus 593 ~g~lW~~t-~~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 593 NGNIWAST-NTGISCYITSKKCFYTY 617 (781)
T ss_dssp SSCEEEEC-SSCEEEEETTTTEEEEE
T ss_pred CCCEEEEc-CCceEEEECCCCceEEe
Confidence 67676665 45699999999988776
No 101
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=57.55 E-value=52 Score=28.30 Aligned_cols=57 Identities=7% Similarity=-0.073 Sum_probs=31.5
Q ss_pred CCc-EEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEE-EeCCeEEEEEeCCCCcEEEEE
Q 016367 213 NGS-LHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLV-VLRGCLSAVHCLDDKGMEIWI 283 (390)
Q Consensus 213 ~G~-lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~-~~~G~L~~~~~~~~~~~~IW~ 283 (390)
+|. +||..... ..|..+|.. .+.+.+..|... ...+. .-+|+|+++... ...+.+|.
T Consensus 55 ~g~~l~~~d~~~-------~~i~~~~~~-g~~~~~~~~~~~-----~~gl~~d~dG~l~v~~~~-~~~v~~~~ 113 (305)
T 3dr2_A 55 AQRTLVWSDLVG-------RRVLGWRED-GTVDVLLDATAF-----TNGNAVDAQQRLVHCEHG-RRAITRSD 113 (305)
T ss_dssp GGTEEEEEETTT-------TEEEEEETT-SCEEEEEESCSC-----EEEEEECTTSCEEEEETT-TTEEEEEC
T ss_pred CCCEEEEEECCC-------CEEEEEeCC-CCEEEEeCCCCc-----cceeeECCCCCEEEEECC-CCEEEEEC
Confidence 454 88886543 378889984 445555444332 12223 236888776554 44454443
No 102
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=57.28 E-value=1e+02 Score=27.16 Aligned_cols=189 Identities=6% Similarity=-0.176 Sum_probs=89.9
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
+.+|-.++.... ...+.|||..|++....-.... .....+.+.+..+.+-+.. . . .-.+
T Consensus 148 spdg~~l~sgs~-dg~v~iwd~~~~~~~~~~~~h~----~~v~~v~~s~~~~~~~~s~-~--~-------------dg~v 206 (357)
T 4g56_B 148 FSDGTQAVSGGK-DFSVKVWDLSQKAVLKSYNAHS----SEVNCVAACPGKDTIFLSC-G--E-------------DGRI 206 (357)
T ss_dssp CSSSSEEEEEET-TSCEEEEETTTTEEEEEECCCS----SCEEEEEECTTCSSCEEEE-E--T-------------TSCE
T ss_pred CCCCCEEEEEeC-CCeEEEEECCCCcEEEEEcCCC----CCEEEEEEccCCCceeeee-c--c-------------CCce
Confidence 335544444321 5678899988877543221111 1234566666544433322 1 1 2357
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceee-eecCCCCCCCCCcc
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFG-EIGLPDCGSLSVCN 258 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~ 258 (390)
.+++.+++ .-........ ......++.+ ++.+...+... ..|..+|+.+.+.. .+..... .-
T Consensus 207 ~~wd~~~~-~~~~~~~~~~-~~~~v~~v~~sp~~~~~la~g~~d-------~~i~~wd~~~~~~~~~~~~~~~-----~v 272 (357)
T 4g56_B 207 LLWDTRKP-KPATRIDFCA-SDTIPTSVTWHPEKDDTFACGDET-------GNVSLVNIKNPDSAQTSAVHSQ-----NI 272 (357)
T ss_dssp EECCTTSS-SCBCBCCCTT-CCSCEEEEEECTTSTTEEEEEESS-------SCEEEEESSCGGGCEEECCCSS-----CE
T ss_pred EEEECCCC-ceeeeeeecc-ccccccchhhhhcccceEEEeecc-------cceeEEECCCCcEeEEEeccce-----eE
Confidence 78888776 3221111000 0000123333 23333332222 26888898765432 2232221 12
Q ss_pred eEEEEe-CC-eEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee-
Q 016367 259 FHLVVL-RG-CLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK- 335 (390)
Q Consensus 259 ~~L~~~-~G-~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 335 (390)
..+... +| .+.+.... +..+.||-++. -.....+.. . .. +.-+++.+
T Consensus 273 ~~l~~sp~~~~~lasgs~-D~~i~iwd~~~------~~~~~~~~H-------------~---------~~-V~~vafsP~ 322 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISE-DCTVAVLDADF------SEVFRDLSH-------------R---------DF-VTGVAWSPL 322 (357)
T ss_dssp EEEEECSSSSCCEEEEET-TSCEEEECTTS------CEEEEECCC-------------S---------SC-EEEEEECSS
T ss_pred EEEEEcCCCCCEEEEEeC-CCEEEEEECCC------CcEeEECCC-------------C---------CC-EEEEEEeCC
Confidence 233332 44 44444444 67899996542 122232222 1 12 55566764
Q ss_pred CCceEeee-eCCeEEEEeCCCC
Q 016367 336 NGEILLEY-ANGALVSYNPENE 356 (390)
Q Consensus 336 ~g~il~~~-~~~~l~~yd~~t~ 356 (390)
++.++... .++.+..||+.++
T Consensus 323 d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 323 DHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp STTEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEcCCCeEEEEECCCC
Confidence 66666655 4677999998754
No 103
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=56.15 E-value=91 Score=30.01 Aligned_cols=120 Identities=11% Similarity=0.103 Sum_probs=63.5
Q ss_pred CceEEECCcEEEEEe-eccCCCCCceEEEEEEC-CCc--eeeeecCCCCCC------CCCcceEEEEeCCeEEEEEeCCC
Q 016367 207 ASEALLNGSLHWVTM-RYKNNPGPRLRIMSFDL-AEE--DFGEIGLPDCGS------LSVCNFHLVVLRGCLSAVHCLDD 276 (390)
Q Consensus 207 ~~~v~~~G~lywl~~-~~~~~~~~~~~il~fD~-~~e--~~~~i~lP~~~~------~~~~~~~L~~~~G~L~~~~~~~~ 276 (390)
..++..+|.+|.... .. .+.++|. .+. .|+. +++.... .+.....++..+|+|++...+
T Consensus 56 ~~P~v~~g~vyv~~~~~~--------~v~AlD~~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d-- 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPN--------NTYALNLNDPGKIVWQH-KPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN-- 124 (571)
T ss_dssp SCCEEETTEEEEECSTTT--------CEEEEETTCTTSEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT--
T ss_pred cccEEECCEEEEEeCCCC--------EEEEEeCCCCccEEEEE-cCCCCccccccccccccccccEEECCEEEEEeCC--
Confidence 457889999998766 44 7999998 554 3433 3332110 000122345567887775432
Q ss_pred CcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------CCeEEE
Q 016367 277 KGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------NGALVS 350 (390)
Q Consensus 277 ~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~ 350 (390)
. .|..++-...+..|.... .- ... ..... ..|+ +. ++.|++... +..++.
T Consensus 125 g--~l~alD~~tG~~~W~~~~--~~-------------~~~----~~~~~-~~P~-v~-~g~v~vg~~~~~~~~~g~v~a 180 (571)
T 2ad6_A 125 G--HLLALDAKTGKINWEVEV--CD-------------PKV----GSTLT-QAPF-VA-KDTVLMGCSGAELGVRGAVNA 180 (571)
T ss_dssp S--EEEEEETTTCCEEEEEEC--CC-------------GGG----TCBCC-SCCE-EE-TTEEEEECBCGGGTCCCEEEE
T ss_pred C--EEEEEECCCCCEEEEecC--CC-------------CCc----cceec-cCCE-EE-CCEEEEEecCCccCCCCEEEE
Confidence 1 355565322255676532 11 000 00000 2222 22 455665554 467999
Q ss_pred EeCCCCcEEEE
Q 016367 351 YNPENEELKDL 361 (390)
Q Consensus 351 yd~~t~~~~~v 361 (390)
||.+|++...-
T Consensus 181 ~D~~tG~~~W~ 191 (571)
T 2ad6_A 181 FDLKTGELKWR 191 (571)
T ss_dssp EETTTCCEEEE
T ss_pred EECCCCcEEEE
Confidence 99999987653
No 104
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=54.89 E-value=96 Score=26.17 Aligned_cols=144 Identities=15% Similarity=0.047 Sum_probs=81.9
Q ss_pred CCeEEEEEeCCCCcccccCCCCcccCCCCce-EEECCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCCCC
Q 016367 179 KSDVEVLTVGIDHTWRYLGPVPWRLNPGASE-ALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSLSV 256 (390)
Q Consensus 179 ~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~-v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~ 256 (390)
...+.+++..++ .=.....++. ..+..+ ...++.+|-+.+.. ..+.+||..+-+. ..++.|..
T Consensus 42 ~S~v~~vD~~tg-kv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~~-------~~v~v~D~~tl~~~~ti~~~~~----- 106 (243)
T 3mbr_X 42 RSSVRKVDLETG-RILQRAEVPP--PYFGAGIVAWRDRLIQLTWRN-------HEGFVYDLATLTPRARFRYPGE----- 106 (243)
T ss_dssp SCEEEEEETTTC-CEEEEEECCT--TCCEEEEEEETTEEEEEESSS-------SEEEEEETTTTEEEEEEECSSC-----
T ss_pred CceEEEEECCCC-CEEEEEeCCC--CcceeEEEEeCCEEEEEEeeC-------CEEEEEECCcCcEEEEEeCCCC-----
Confidence 568999999999 3322112222 222223 45577888887654 4899999987544 55676642
Q ss_pred cceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 257 CNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 257 ~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
..-|...++.|++.... . .|++++-. .=..+.+|.... .+. ... . ..-+-. .+
T Consensus 107 -Gwglt~dg~~L~vSdgs--~--~l~~iDp~----t~~~~~~I~V~~-----------~g~----~~~-~-lNeLe~-~~ 159 (243)
T 3mbr_X 107 -GWALTSDDSHLYMSDGT--A--VIRKLDPD----TLQQVGSIKVTA-----------GGR----PLD-N-LNELEW-VN 159 (243)
T ss_dssp -CCEEEECSSCEEEECSS--S--EEEEECTT----TCCEEEEEECEE-----------TTE----ECC-C-EEEEEE-ET
T ss_pred -ceEEeeCCCEEEEECCC--C--eEEEEeCC----CCeEEEEEEEcc-----------CCc----ccc-c-ceeeEE-eC
Confidence 23555556778886532 2 47777621 223455666500 000 000 1 222222 26
Q ss_pred CceEeee-eCCeEEEEeCCCCcEEE-EEEe
Q 016367 337 GEILLEY-ANGALVSYNPENEELKD-LVIF 364 (390)
Q Consensus 337 g~il~~~-~~~~l~~yd~~t~~~~~-v~~~ 364 (390)
|+|+... ..+.+...|++|++... |.+.
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence 7777655 35679999999998754 4544
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=54.71 E-value=1.7e+02 Score=29.01 Aligned_cols=116 Identities=16% Similarity=0.146 Sum_probs=65.0
Q ss_pred EEEEEECCCceeeee-cCCCCCCCCCcceEEEEe-C--CeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCccc
Q 016367 232 RIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVL-R--GCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASL 307 (390)
Q Consensus 232 ~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~-~--G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~ 307 (390)
.|..+|+.+++...+ .+..+.. .-..+... + |.+.+.... +..+.||-++. ..|.....+..
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~~~l~s~s~-Dg~I~vwd~~~----~~~~~~~~~~~------ 97 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEG---PVWRVDWAHPKFGTILASCSY-DGKVLIWKEEN----GRWSQIAVHAV------ 97 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSS---CEEEEEECCTTSCSEEEEEET-TSCEEEEEEET----TEEEEEEEECC------
T ss_pred cEEEEecCCCCCccceeccCCcC---ceEEEEecCCCCCCEEEEEeC-CCeEEEEECCC----CcccccccccC------
Confidence 677888775555443 2332221 12233332 2 666665555 78999999883 35666655543
Q ss_pred ccCcCcchhhhhccCCCCcceEEEEEeeC--CceEeee-eCCeEEEEeCCCCcE-EEEEEeCCCCceEEEeeec
Q 016367 308 RENARPHLEMLKKSGLGRGSSQVVCDWKN--GEILLEY-ANGALVSYNPENEEL-KDLVIFDPPKWFCSIVHVE 377 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~il~~~-~~~~l~~yd~~t~~~-~~v~~~~~~~~~~~~~y~~ 377 (390)
.. .. +..+.+..+ +.+++.. .++.+..||++++.. ....+.+.......+.+.+
T Consensus 98 -------h~--------~~-V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 98 -------HS--------AS-VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp -------CS--------SC-EEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECC
T ss_pred -------CC--------CC-eEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecC
Confidence 11 11 555667666 6655554 467799999998743 2233444444444454444
No 106
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=54.19 E-value=1.2e+02 Score=27.03 Aligned_cols=102 Identities=9% Similarity=-0.031 Sum_probs=56.5
Q ss_pred EEEEEECCCceeeeecCCCCCCCCCcceEEEEe--CCeEEEEEe-CCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccc
Q 016367 232 RIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL--RGCLSAVHC-LDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLR 308 (390)
Q Consensus 232 ~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~~~~-~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~ 308 (390)
.|..+|+.+.+....-..... .-..+... ++.|.++.. ..+..+.+|-+... .....+..
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~----~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~------~~~~~~~~------- 302 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNA----AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG------ARVNTVDA------- 302 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSS----CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC------CEEEEEEC-------
T ss_pred eEEEccCCCCCccEEecCCcc----eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC------CEEEEEeC-------
Confidence 788899987544332111111 12233333 335555432 12778999987631 23334333
Q ss_pred cCcCcchhhhhccCCCCcceEEEEEeeCCceEeee---eCCeEEEEeCCCCcEEEE-EEeCC
Q 016367 309 ENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY---ANGALVSYNPENEELKDL-VIFDP 366 (390)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~---~~~~l~~yd~~t~~~~~v-~~~~~ 366 (390)
.. . ..-+.+..++..++.. .++.+..||..+++...+ .+.+.
T Consensus 303 ------~~---------~-v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h 348 (401)
T 4aez_A 303 ------GS---------Q-VTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH 348 (401)
T ss_dssp ------SS---------C-EEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC
T ss_pred ------CC---------c-EEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC
Confidence 11 1 5556677777766553 367799999998877665 34443
No 107
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=53.87 E-value=96 Score=25.86 Aligned_cols=197 Identities=14% Similarity=0.112 Sum_probs=98.9
Q ss_pred EEeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCC
Q 016367 100 VVGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRK 179 (390)
Q Consensus 100 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 179 (390)
+.-..+|-+.+.... ...++++||. ++...++.+... ....++.+|+.. ..-|.. . ..
T Consensus 67 i~~~~~g~l~v~~~~-~~~v~~~d~~-g~~~~~~~~~~~---~~~~~i~~~~~g-~l~v~~----~------------~~ 124 (300)
T 2qc5_A 67 LIVSSLGDIWFTENG-ANKIGKLSKK-GGFTEYPLPQPD---SGPYGITEGLNG-DIWFTQ----L------------NG 124 (300)
T ss_dssp EEECTTSCEEEEETT-TTEEEEECTT-SCEEEEECSSTT---CCEEEEEECSTT-CEEEEE----T------------TT
T ss_pred EEECCCCCEEEEecC-CCeEEEECCC-CCeEEecCCCCC---CCCccceECCCC-CEEEEc----c------------CC
Confidence 333456666555431 3578999998 666544332111 134577777643 322211 1 02
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
..+..|+.. + ...... .+... ....++.+ +|.+|+..... ..|..||. +.++..+.+|.... .
T Consensus 125 ~~i~~~~~~-g-~~~~~~-~~~~~-~~~~~i~~d~~g~l~v~~~~~-------~~i~~~~~-~g~~~~~~~~~~~~---~ 189 (300)
T 2qc5_A 125 DRIGKLTAD-G-TIYEYD-LPNKG-SYPAFITLGSDNALWFTENQN-------NSIGRITN-TGKLEEYPLPTNAA---A 189 (300)
T ss_dssp TEEEEECTT-S-CEEEEE-CSSTT-CCEEEEEECTTSSEEEEETTT-------TEEEEECT-TCCEEEEECSSTTC---C
T ss_pred CeEEEECCC-C-CEEEcc-CCCCC-CCceeEEECCCCCEEEEecCC-------CeEEEECC-CCcEEEeeCCCCCC---C
Confidence 356666665 5 444322 11111 11123443 57766544322 37999999 66666666654331 2
Q ss_pred ceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 258 NFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 258 ~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
...+... +|.|++.... ...+.++-. .+ .+.. ..++. . ... ..-+++..+
T Consensus 190 ~~~i~~d~~g~l~v~~~~-~~~i~~~~~--~g---~~~~-~~~~~--------------~-------~~~-~~~i~~d~~ 240 (300)
T 2qc5_A 190 PVGITSGNDGALWFVEIM-GNKIGRITT--TG---EISE-YDIPT--------------P-------NAR-PHAITAGKN 240 (300)
T ss_dssp EEEEEECTTSSEEEEETT-TTEEEEECT--TC---CEEE-EECSS--------------T-------TCC-EEEEEECST
T ss_pred cceEEECCCCCEEEEccC-CCEEEEEcC--CC---cEEE-EECCC--------------C-------CCC-ceEEEECCC
Confidence 2334443 6788876554 444444332 11 2222 11111 0 011 444566667
Q ss_pred CceEeeee-CCeEEEEeCCCCcEEEEEE
Q 016367 337 GEILLEYA-NGALVSYNPENEELKDLVI 363 (390)
Q Consensus 337 g~il~~~~-~~~l~~yd~~t~~~~~v~~ 363 (390)
|.+++... ...+..||+ ++++..+.+
T Consensus 241 g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 267 (300)
T 2qc5_A 241 SEIWFTEWGANQIGRITN-DNTIQEYQL 267 (300)
T ss_dssp TCEEEEETTTTEEEEECT-TSCEEEEEC
T ss_pred CCEEEeccCCCeEEEECC-CCcEEEEEC
Confidence 77777664 467999999 566666544
No 108
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=53.46 E-value=61 Score=32.03 Aligned_cols=122 Identities=14% Similarity=0.110 Sum_probs=63.4
Q ss_pred CceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCC------CCCcceEEEEeCCeEEEEEeCCCCcE
Q 016367 207 ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGS------LSVCNFHLVVLRGCLSAVHCLDDKGM 279 (390)
Q Consensus 207 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~------~~~~~~~L~~~~G~L~~~~~~~~~~~ 279 (390)
..+++.+|.+|...... .|.++|..+.+...- +++.... .+.....+...+|+|++...+ .
T Consensus 71 ~~P~v~~g~vyv~~~~~--------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d--g-- 138 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS--------VVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD--G-- 138 (677)
T ss_dssp CCCEEETTEEEEECGGG--------CEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT--S--
T ss_pred eCCEEECCEEEEECCCC--------eEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC--C--
Confidence 45788999999876655 899999876544332 3222110 000122345567777775432 2
Q ss_pred EEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------CCeEEEEeC
Q 016367 280 EIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------NGALVSYNP 353 (390)
Q Consensus 280 ~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~yd~ 353 (390)
.|..|+-...+..|........ .. ..... ..|+ + .++.|++... +..++.||.
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~-------------~~-----~~~~~-~~p~-v-~~~~v~v~~~~~~~~~~g~v~a~D~ 197 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQ-------------KG-----SLTIT-GAPR-V-FKGKVIIGNGGAEYGVRGYITAYDA 197 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTC-------------CS-----SCBCC-SCCE-E-ETTEEEECCBCTTTCCBCEEEEEET
T ss_pred EEEEEECCCCCEEeeecCCcCc-------------Cc-----Ccccc-cCcE-E-ECCEEEEEecccccCCCCEEEEEEC
Confidence 3445552212556765311010 00 00000 2222 2 2455655543 457999999
Q ss_pred CCCcEEEE
Q 016367 354 ENEELKDL 361 (390)
Q Consensus 354 ~t~~~~~v 361 (390)
+|++...-
T Consensus 198 ~tG~~~W~ 205 (677)
T 1kb0_A 198 ETGERKWR 205 (677)
T ss_dssp TTCCEEEE
T ss_pred CCCcEEEE
Confidence 99987654
No 109
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=53.12 E-value=1e+02 Score=30.24 Aligned_cols=119 Identities=10% Similarity=0.090 Sum_probs=63.3
Q ss_pred CceEEECCcEEEEEeeccCCCCCceEEEEEECCCc--eeeeecCCCCCC------CCCcceEEEEeCCeEEEEEeCCCCc
Q 016367 207 ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEE--DFGEIGLPDCGS------LSVCNFHLVVLRGCLSAVHCLDDKG 278 (390)
Q Consensus 207 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e--~~~~i~lP~~~~------~~~~~~~L~~~~G~L~~~~~~~~~~ 278 (390)
..+++.+|.+|.....+ .+.++|..+. .|+. +++.... .......+...+|+|++...+ .
T Consensus 60 ~~P~v~~g~vyv~~~~~--------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d--g- 127 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSWS--------RVIAVDAASGKELWRY-DPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD--G- 127 (668)
T ss_dssp CCCEEETTEEEEEEGGG--------EEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT--S-
T ss_pred cCCEEECCEEEEECCCC--------eEEEEECCCChhceEE-CCCCCccccccccccCCccceEEECCEEEEEcCC--C-
Confidence 45788999999887765 8999998654 4443 2221110 000122344567777774432 2
Q ss_pred EEEEEEee-CCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------CCeEEEE
Q 016367 279 MEIWIMKE-YKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------NGALVSY 351 (390)
Q Consensus 279 ~~IW~l~~-~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~y 351 (390)
.|..++- .+ +..|..... +. .. ..... ..|+ + .++.|++... +..++.|
T Consensus 128 -~l~alD~~tG-~~~W~~~~~-~~-------------~~-----~~~~~-~~P~-v-~~~~v~vg~~~~~~~~~g~v~a~ 183 (668)
T 1kv9_A 128 -RLIALDAKTG-KAIWSQQTT-DP-------------AK-----PYSIT-GAPR-V-VKGKVIIGNGGAEYGVRGFVSAY 183 (668)
T ss_dssp -EEEEEETTTC-CEEEEEECS-CT-------------TS-----SCBCC-SCCE-E-ETTEEEECCBCTTTCCBCEEEEE
T ss_pred -EEEEEECCCC-CEeeeeccC-CC-------------CC-----cceec-CCCE-E-ECCEEEEeCCCCCcCCCCEEEEE
Confidence 3455552 33 557775321 11 00 00000 2222 2 2455555443 3579999
Q ss_pred eCCCCcEEEE
Q 016367 352 NPENEELKDL 361 (390)
Q Consensus 352 d~~t~~~~~v 361 (390)
|.+|++...-
T Consensus 184 D~~tG~~~W~ 193 (668)
T 1kv9_A 184 DADTGKLAWR 193 (668)
T ss_dssp ETTTCCEEEE
T ss_pred ECCCCcEEEE
Confidence 9999987654
No 110
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=53.04 E-value=1.1e+02 Score=26.28 Aligned_cols=188 Identities=12% Similarity=-0.041 Sum_probs=90.1
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcc-c
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTW-R 194 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W-~ 194 (390)
...++++|+.|++....-+.... ..++.+++..+ +-++. . . ....+.+++..++ .- +
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~-~l~v~-~--~------------~~~~v~~~d~~~~-~~~~ 125 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLK-----PFGATINNTTQ-TLWFG-N--T------------VNSAVTAIDAKTG-EVKG 125 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSC-----CCSEEEETTTT-EEEEE-E--T------------TTTEEEEEETTTC-CEEE
T ss_pred CccEEEEcCCCCeEEEEEecCCC-----cceEEECCCCC-EEEEE-e--c------------CCCEEEEEeCCCC-eeEE
Confidence 45799999999875432221111 12455666443 32222 1 1 1247888888887 32 1
Q ss_pred ccCCCCcccC-----CC-CceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCCCCCCcceEEEEeC
Q 016367 195 YLGPVPWRLN-----PG-ASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCGSLSVCNFHLVVLR 265 (390)
Q Consensus 195 ~~~~~p~~~~-----~~-~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~L~~~~ 265 (390)
.+.. +.... .. ...+.+ +|...++.... ....|..+|+.+.+... ++.+.... .... ..-+
T Consensus 126 ~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~-~s~d 195 (353)
T 3vgz_A 126 RLVL-DDRKRTEEVRPLQPRELVADDATNTVYISGIG-----KESVIWVVDGGNIKLKTAIQNTGKMS---TGLA-LDSE 195 (353)
T ss_dssp EEES-CCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-----SSCEEEEEETTTTEEEEEECCCCTTC---CCCE-EETT
T ss_pred EEec-CCCccccccCCCCCceEEECCCCCEEEEEecC-----CCceEEEEcCCCCceEEEecCCCCcc---ceEE-ECCC
Confidence 1211 10000 00 122333 66644443321 01379999998776543 34222211 1122 2234
Q ss_pred Ce-EEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCce-Eeee
Q 016367 266 GC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEI-LLEY 343 (390)
Q Consensus 266 G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i-l~~~ 343 (390)
|+ |++.. . ...+.+|-++. ......+.. ... +.... ..-+++..+|+. ++..
T Consensus 196 g~~l~~~~-~-~~~i~~~d~~~------~~~~~~~~~-------------~~~----~~~~~-~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 196 GKRLYTTN-A-DGELITIDTAD------NKILSRKKL-------------LDD----GKEHF-FINISLDTARQRAFITD 249 (353)
T ss_dssp TTEEEEEC-T-TSEEEEEETTT------TEEEEEEEC-------------CCS----SSCCC-EEEEEEETTTTEEEEEE
T ss_pred CCEEEEEc-C-CCeEEEEECCC------CeEEEEEEc-------------CCC----CCCcc-cceEEECCCCCEEEEEe
Confidence 54 44433 3 45566655442 233444443 000 11112 444667777774 4444
Q ss_pred e-CCeEEEEeCCCCcEEEE
Q 016367 344 A-NGALVSYNPENEELKDL 361 (390)
Q Consensus 344 ~-~~~l~~yd~~t~~~~~v 361 (390)
. +..+..||+++++....
T Consensus 250 ~~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp SSSSEEEEEETTTCCEEEE
T ss_pred CCCCEEEEEECCCCcEEEE
Confidence 3 36799999998876543
No 111
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=52.36 E-value=1e+02 Score=25.77 Aligned_cols=95 Identities=16% Similarity=0.151 Sum_probs=55.3
Q ss_pred EEEEEECCCceee-eecCCCCCCCCCcceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCccccc
Q 016367 232 RIMSFDLAEEDFG-EIGLPDCGSLSVCNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRE 309 (390)
Q Consensus 232 ~il~fD~~~e~~~-~i~lP~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 309 (390)
.|..+|+.+.+.. .+..... .-..+... +|.|. +... +..+.||-++.. .....+..
T Consensus 206 ~i~i~d~~~~~~~~~~~~~~~-----~i~~~~~~~~~~l~-~~~~-dg~v~iwd~~~~------~~~~~~~~-------- 264 (313)
T 3odt_A 206 LIKLVDMHTGDVLRTYEGHES-----FVYCIKLLPNGDIV-SCGE-DRTVRIWSKENG------SLKQVITL-------- 264 (313)
T ss_dssp EEEEEETTTCCEEEEEECCSS-----CEEEEEECTTSCEE-EEET-TSEEEEECTTTC------CEEEEEEC--------
T ss_pred eEEEEECCchhhhhhhhcCCc-----eEEEEEEecCCCEE-EEec-CCEEEEEECCCC------ceeEEEec--------
Confidence 8999999865443 3332221 12233333 45433 3344 778999987632 23334333
Q ss_pred CcCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCeEEEEeCCCCcEEEE
Q 016367 310 NARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGALVSYNPENEELKDL 361 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~t~~~~~v 361 (390)
.. . . ..-+.+..++.++....++.+..||++++++...
T Consensus 265 -----~~-------~-~-i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 265 -----PA-------I-S-IWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp -----SS-------S-C-EEEEEECTTSCEEEEETTSCEEEEESCGGGCCC-
T ss_pred -----cC-------c-e-EEEEEEccCCCEEEEeCCCcEEEEeCCCCceeeh
Confidence 11 0 1 5556777788877666677899999999876543
No 112
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=52.04 E-value=1.2e+02 Score=26.23 Aligned_cols=141 Identities=16% Similarity=0.109 Sum_probs=71.4
Q ss_pred ccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCC--ccc
Q 016367 117 NPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDH--TWR 194 (390)
Q Consensus 117 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~--~W~ 194 (390)
..+++++|.+++...+..... ...++++++..+ +-.+. . . ....+.+|+..+.. ..+
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~-----~p~gia~~~dg~-~lyv~--d-~------------~~~~I~~~~~~~~~~~~~~ 223 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELH-----VPGGAEVSADSS-FVLVA--E-F------------LSHQIVKYWLEGPKKGTAE 223 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEES-----CCCEEEECTTSS-EEEEE--E-G------------GGTEEEEEESSSTTTTCEE
T ss_pred ceEEEEeCCCCEEEEeccCCc-----cCcceEECCCCC-EEEEE--e-C------------CCCeEEEEECCCCcCCccc
Confidence 468888888777554422111 112566665432 22221 1 0 12467788877530 333
Q ss_pred ccCCCCcccCCCCceEEE--CCcEEEEEeeccCCC----CCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEeCCeE
Q 016367 195 YLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNP----GPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVLRGCL 268 (390)
Q Consensus 195 ~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~----~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~~G~L 268 (390)
.....+. ..++.+ +|.+ |++....... .....|..||...+....+..|...... ....+...+|.|
T Consensus 224 ~~~~~~g-----P~gi~~d~~G~l-~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~-~~~~~~~~~g~L 296 (322)
T 2fp8_A 224 VLVKIPN-----PGNIKRNADGHF-WVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGE-HFEQIQEHDGLL 296 (322)
T ss_dssp EEEECSS-----EEEEEECTTSCE-EEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTS-CCCEEEEETTEE
T ss_pred eEEeCCC-----CCCeEECCCCCE-EEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccc-cceEEEEeCCEE
Confidence 3222211 123444 4765 5554210000 0013799999988888888877543111 122344568899
Q ss_pred EEEEeCCCCcEEEEEEee
Q 016367 269 SAVHCLDDKGMEIWIMKE 286 (390)
Q Consensus 269 ~~~~~~~~~~~~IW~l~~ 286 (390)
++.... ...|.+..++.
T Consensus 297 ~v~~~~-~~~i~~~~~~~ 313 (322)
T 2fp8_A 297 YIGTLF-HGSVGILVYDK 313 (322)
T ss_dssp EEECSS-CSEEEEEEC--
T ss_pred EEeecC-CCceEEEeccc
Confidence 987655 56666666653
No 113
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=51.91 E-value=1.4e+02 Score=27.05 Aligned_cols=183 Identities=12% Similarity=0.082 Sum_probs=94.7
Q ss_pred ccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCccccc
Q 016367 117 NPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRYL 196 (390)
Q Consensus 117 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~~ 196 (390)
..+.+||..++....|..... ....+.+.|.. ++ ++.... . .....+.+++..++ ..+.+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~-----~v~~~~~Spdg-~~-la~~s~-~-----------~~~~~i~~~d~~tg-~~~~l 218 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ-----PLMSPAWSPDG-SK-LAYVTF-E-----------SGRSALVIQTLANG-AVRQV 218 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS-----CEEEEEECTTS-SE-EEEEEC-T-----------TSSCEEEEEETTTC-CEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCC-----cceeeEEcCCC-CE-EEEEEe-c-----------CCCcEEEEEECCCC-cEEEe
Confidence 689999998766555543211 24466677753 33 222221 1 12368999999998 66554
Q ss_pred CCCCcccCCCCceEEE--CCc-EEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE-eCCe-EEEE
Q 016367 197 GPVPWRLNPGASEALL--NGS-LHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV-LRGC-LSAV 271 (390)
Q Consensus 197 ~~~p~~~~~~~~~v~~--~G~-lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~-~~G~-L~~~ 271 (390)
...+.. ...+.+ +|. +.+..... ....|..+|+.+.+...+..... ....+.- -+|+ |++.
T Consensus 219 ~~~~~~----~~~~~~spdg~~la~~~~~~-----g~~~i~~~d~~~~~~~~l~~~~~-----~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 219 ASFPRH----NGAPAFSPDGSKLAFALSKT-----GSLNLYVMDLASGQIRQVTDGRS-----NNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp ECCSSC----EEEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEECCCCSS-----CEEEEEECTTSSEEEEE
T ss_pred ecCCCc----ccCEEEcCCCCEEEEEEecC-----CCceEEEEECCCCCEEeCcCCCC-----cccceEECCCCCEEEEE
Confidence 332211 112222 565 44343321 12378999998877654422111 1122222 2566 4444
Q ss_pred EeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEee-eeC---Ce
Q 016367 272 HCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLE-YAN---GA 347 (390)
Q Consensus 272 ~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~~~---~~ 347 (390)
... .....||.++-.+ .. ...+.. . ... ...+.+..+|+.++. ..+ ..
T Consensus 285 s~~-~g~~~i~~~d~~~--~~---~~~l~~-------------~--------~~~-~~~~~~spdG~~l~~~~~~~g~~~ 336 (415)
T 2hqs_A 285 SDQ-AGRPQVYKVNING--GA---PQRITW-------------E--------GSQ-NQDADVSSDGKFMVMVSSNGGQQH 336 (415)
T ss_dssp ECT-TSSCEEEEEETTS--SC---CEECCC-------------S--------SSE-EEEEEECTTSSEEEEEEECSSCEE
T ss_pred ECC-CCCcEEEEEECCC--CC---EEEEec-------------C--------CCc-ccCeEECCCCCEEEEEECcCCceE
Confidence 433 4556777776332 11 112221 0 011 334556677774443 332 46
Q ss_pred EEEEeCCCCcEEEE
Q 016367 348 LVSYNPENEELKDL 361 (390)
Q Consensus 348 l~~yd~~t~~~~~v 361 (390)
++.+|+++++.+.+
T Consensus 337 i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 337 IAKQDLATGGVQVL 350 (415)
T ss_dssp EEEEETTTCCEEEC
T ss_pred EEEEECCCCCEEEe
Confidence 99999999887654
No 114
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=50.95 E-value=1.3e+02 Score=26.49 Aligned_cols=96 Identities=10% Similarity=0.008 Sum_probs=52.4
Q ss_pred EEEEEECCCceeee-ecCCCCCCCCCcceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCccccc
Q 016367 232 RIMSFDLAEEDFGE-IGLPDCGSLSVCNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRE 309 (390)
Q Consensus 232 ~il~fD~~~e~~~~-i~lP~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 309 (390)
.|..+|+.+.+... +..... ....+... +|.+.++... ...+.||-++... ....+..
T Consensus 228 ~i~~~d~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~------~~~~~~~-------- 287 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGHHG-----PISVLEFNDTNKLLLSASD-DGTLRIWHGGNGN------SQNCFYG-------- 287 (425)
T ss_dssp CEEEEETTCSSCSEEECCCSS-----CEEEEEEETTTTEEEEEET-TSCEEEECSSSBS------CSEEECC--------
T ss_pred eEEEEEcCCCceeeeeccCCC-----ceEEEEECCCCCEEEEEcC-CCEEEEEECCCCc------cceEecC--------
Confidence 78999998764432 221111 12233333 5665555554 7789999876321 1122221
Q ss_pred CcCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCeEEEEeCCCCcEEEE
Q 016367 310 NARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGALVSYNPENEELKDL 361 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~t~~~~~v 361 (390)
. ... ..-+.+..++.++....++.+..||+++++....
T Consensus 288 -----~--------~~~-i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 288 -----H--------SQS-IVSASWVGDDKVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp -----C--------SSC-EEEEEEETTTEEEEEETTSEEEEEETTTTEEEEE
T ss_pred -----C--------Ccc-EEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEe
Confidence 0 111 5555666677333344567899999998875443
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=50.30 E-value=1.2e+02 Score=25.99 Aligned_cols=33 Identities=6% Similarity=0.032 Sum_probs=23.1
Q ss_pred eEEEEEeeCCceEeee-eCCeEEEEeCCCCcEEE
Q 016367 328 SQVVCDWKNGEILLEY-ANGALVSYNPENEELKD 360 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~-~~~~l~~yd~~t~~~~~ 360 (390)
+.-+++..++..++.. .++.+..||.++++...
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 5556677777766655 46679999999876543
No 116
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=50.12 E-value=1.2e+02 Score=25.77 Aligned_cols=147 Identities=10% Similarity=0.085 Sum_probs=74.8
Q ss_pred CCeEEEEEeCCCC-cccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 179 KSDVEVLTVGIDH-TWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 179 ~~~~~vyss~~~~-~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
...+.+++..+++ .|+.-..-. .......+.-+|.++. .... .|..||...+....+..|.... .
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~--~~~~~~~~~pdG~ilv-s~~~--------~V~~~d~~G~~~W~~~~~~~~~---~ 79 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKG--WECNSVAATKAGEILF-SYSK--------GAKMITRDGRELWNIAAPAGCE---M 79 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTT--CCCCEEEECTTSCEEE-ECBS--------EEEEECTTSCEEEEEECCTTCE---E
T ss_pred CCEEEEEECCCCeEEEEeCCCcc--CCCcCeEECCCCCEEE-eCCC--------CEEEECCCCCEEEEEcCCCCcc---c
Confidence 3578888887875 676532110 0111122334787766 4433 7999999655555566653221 1
Q ss_pred ceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC
Q 016367 258 NFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG 337 (390)
Q Consensus 258 ~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (390)
...-...+|.+.++... ..-.|+.++..+ +..|.. .+...... ... . ...+.+..+|
T Consensus 80 ~~~~~~~dG~~lv~~~~--~~~~v~~vd~~G-k~l~~~--~~~~~~~~---------~~~--------~-~~~v~~~~~G 136 (276)
T 3no2_A 80 QTARILPDGNALVAWCG--HPSTILEVNMKG-EVLSKT--EFETGIER---------PHA--------Q-FRQINKNKKG 136 (276)
T ss_dssp EEEEECTTSCEEEEEES--TTEEEEEECTTS-CEEEEE--EECCSCSS---------GGG--------S-CSCCEECTTS
T ss_pred cccEECCCCCEEEEecC--CCCEEEEEeCCC-CEEEEE--eccCCCCc---------ccc--------c-ccCceECCCC
Confidence 11122346777775542 145677776433 334443 22220000 000 0 1122455677
Q ss_pred ceEeeee-CCeEEEEeCCCCcEEEEE
Q 016367 338 EILLEYA-NGALVSYNPENEELKDLV 362 (390)
Q Consensus 338 ~il~~~~-~~~l~~yd~~t~~~~~v~ 362 (390)
.+++... +..++.||++.+.+-++.
T Consensus 137 ~~lv~~~~~~~v~~~d~~G~~~w~~~ 162 (276)
T 3no2_A 137 NYLVPLFATSEVREIAPNGQLLNSVK 162 (276)
T ss_dssp CEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred CEEEEecCCCEEEEECCCCCEEEEEE
Confidence 7766553 567999999844444443
No 117
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=49.98 E-value=1.5e+02 Score=26.87 Aligned_cols=50 Identities=14% Similarity=0.109 Sum_probs=29.1
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE--eCCeEEEEEe
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV--LRGCLSAVHC 273 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~--~~G~L~~~~~ 273 (390)
+|.|||..... ..|..+|+.......+-. .... .-..|++ .+|.|++...
T Consensus 170 ~~~lY~~d~~~-------~~I~~~~~~g~~~~~l~~-~~~~---~P~~iavdp~~g~ly~td~ 221 (400)
T 3p5b_L 170 HSNIYWTDSVL-------GTVSVADTKGVKRKTLFR-ENGS---KPRAIVVDPVHGFMYWTDW 221 (400)
T ss_dssp TTEEEEEETTT-------TEEEEECTTTCSEEEEEE-CSSC---CEEEEEEETTTTEEEEEEC
T ss_pred CCceEEEECCC-------CeEEEEeCCCCceEEEEe-CCCC---CcceEEEecccCeEEEEeC
Confidence 68999986543 378899998765544421 1110 1223344 3677887654
No 118
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=49.64 E-value=1.3e+02 Score=29.77 Aligned_cols=121 Identities=12% Similarity=0.095 Sum_probs=63.0
Q ss_pred CceEEECCcEEEEEeeccCCCCCceEEEEEECCCc--eeeeecCCCCCC------CCCcceEEEEeCCeEEEEEeCCCCc
Q 016367 207 ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEE--DFGEIGLPDCGS------LSVCNFHLVVLRGCLSAVHCLDDKG 278 (390)
Q Consensus 207 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e--~~~~i~lP~~~~------~~~~~~~L~~~~G~L~~~~~~~~~~ 278 (390)
..+++.+|.+|...... .+.++|..+. .|+. +.+.... .+.....+...+|+|++... ..
T Consensus 64 ~~P~v~~g~vyv~~~~~--------~v~AlD~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--dg- 131 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS--------VVYALDARDGRLIWKY-DPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--DG- 131 (689)
T ss_dssp CCCEEETTEEEEECGGG--------CEEEEETTTCCEEEEE-CCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TS-
T ss_pred ecCEEECCEEEEEcCCC--------eEEEEECCCCceeEEE-cCCCCccccccccccCCCCccEEECCEEEEEcc--CC-
Confidence 45788999999876655 7999998654 4443 2221110 00012234556777777443 22
Q ss_pred EEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------CCeEEEEe
Q 016367 279 MEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------NGALVSYN 352 (390)
Q Consensus 279 ~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~~~l~~yd 352 (390)
.|..++-...+..|......+. ... .... ..|+ + .++.|++... +..++.||
T Consensus 132 -~l~AlDa~TG~~~W~~~~~~~~-------------~~~-----~~~~-~sP~-v-~~g~v~vg~~~~~~~~~g~v~a~D 189 (689)
T 1yiq_A 132 -RLEAIDAKTGQRAWSVDTRADH-------------KRS-----YTIT-GAPR-V-VNGKVVIGNGGAEFGVRGYVTAYD 189 (689)
T ss_dssp -EEEEEETTTCCEEEEEECCSCT-------------TSC-----CBCC-SCCE-E-ETTEEEECCBCTTTCCBCEEEEEE
T ss_pred -EEEEEECCCCCEeeeecCcCCC-------------CCC-----cccc-CCcE-E-ECCEEEEEeCCCccCCCCEEEEEE
Confidence 2444542212556775432111 000 0000 2232 2 2455555432 35799999
Q ss_pred CCCCcEEEE
Q 016367 353 PENEELKDL 361 (390)
Q Consensus 353 ~~t~~~~~v 361 (390)
.+|++...-
T Consensus 190 ~~tG~~~W~ 198 (689)
T 1yiq_A 190 AETGKEAWR 198 (689)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEE
Confidence 999986543
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=47.92 E-value=1.3e+02 Score=25.74 Aligned_cols=69 Identities=7% Similarity=0.092 Sum_probs=42.8
Q ss_pred CeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeee-e
Q 016367 266 GCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY-A 344 (390)
Q Consensus 266 G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~-~ 344 (390)
|.+.++... +..+.||-++..+ ......+.. .. .. +.-+.+..++..++.. .
T Consensus 54 g~~l~~~~~-dg~i~iw~~~~~~----~~~~~~~~~-------------h~--------~~-v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 54 GNFLIAGSW-ANDVRCWEVQDSG----QTIPKAQQM-------------HT--------GP-VLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp SEEEEEEET-TSEEEEEEECTTS----CEEEEEEEE-------------CS--------SC-EEEEEECTTSSEEEEEET
T ss_pred ceEEEEECC-CCcEEEEEcCCCC----ceeEEEecc-------------cc--------CC-EEEEEECcCCCEEEEEcC
Confidence 466665555 7789999998422 222233322 11 11 5556777777765554 4
Q ss_pred CCeEEEEeCCCCcEEEE
Q 016367 345 NGALVSYNPENEELKDL 361 (390)
Q Consensus 345 ~~~l~~yd~~t~~~~~v 361 (390)
++.+..||+++++...+
T Consensus 107 dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp TSEEEEEETTTTEEEEE
T ss_pred CCcEEEEEcCCCCceee
Confidence 66799999999887664
No 120
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=47.58 E-value=1.6e+02 Score=26.49 Aligned_cols=140 Identities=11% Similarity=-0.018 Sum_probs=71.9
Q ss_pred CceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEE
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEV 184 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~v 184 (390)
.+.|++... ..+...++.+++...+-... ....++.+|+..+...+. . . ....+..
T Consensus 87 ~~~l~~~~~---~~I~~i~~~~~~~~~~~~~~-----~~~~gl~~d~~~~~ly~~--D--~------------~~~~I~r 142 (386)
T 3v65_B 87 EPVLLFANR---IDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRELVFWS--D--V------------TLDRILR 142 (386)
T ss_dssp CCEEEEECB---SCEEEECTTSCCCEEEECSC-----SCEEEEEEETTTTEEEEE--E--T------------TTTEEEE
T ss_pred cceeEeecC---ccceeeccCCCcEEEEecCC-----CccEEEEEecCCCeEEEE--e--C------------CCCcEEE
Confidence 455655554 56777777766544332211 125588888765533222 1 1 1246777
Q ss_pred EEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEE
Q 016367 185 LTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHL 261 (390)
Q Consensus 185 yss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L 261 (390)
++..++ ..+.+.. ..... ..++.+ +|.+||..... ..|..+|+.......+.. .... .-..+
T Consensus 143 ~~~~g~-~~~~~~~--~~~~~-p~glavd~~~g~lY~~d~~~-------~~I~~~~~dg~~~~~l~~-~~l~---~P~gi 207 (386)
T 3v65_B 143 ANLNGS-NVEEVVS--TGLES-PGGLAVDWVHDKLYWTDSGT-------SRIEVANLDGAHRKVLLW-QSLE---KPRAI 207 (386)
T ss_dssp EETTSC-CEEEEEC--SSCSC-CCCEEEETTTTEEEEEETTT-------TEEEECBTTSCSCEEEEC-SSCS---CEEEE
T ss_pred EecCCC-CcEEEEe--CCCCC-ccEEEEEeCCCeEEEEcCCC-------CeEEEEeCCCCceEEeec-CCCC---CCcEE
Confidence 777766 5443321 11111 123333 68999986543 378888887654433321 1111 12233
Q ss_pred EEe--CCeEEEEEeCCCCcEEEEEEe
Q 016367 262 VVL--RGCLSAVHCLDDKGMEIWIMK 285 (390)
Q Consensus 262 ~~~--~G~L~~~~~~~~~~~~IW~l~ 285 (390)
++. +|.|++.... . .-.|++..
T Consensus 208 avdp~~g~ly~td~~-~-~~~I~r~~ 231 (386)
T 3v65_B 208 ALHPMEGTIYWTDWG-N-TPRIEASS 231 (386)
T ss_dssp EEETTTTEEEEEECS-S-SCEEEEEE
T ss_pred EEEcCCCeEEEeccC-C-CCEEEEEe
Confidence 443 6778886654 2 23455554
No 121
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=47.40 E-value=1.4e+02 Score=25.94 Aligned_cols=68 Identities=9% Similarity=-0.118 Sum_probs=37.7
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA 344 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~ 344 (390)
+|++.+.... +..+.||-++... .....+..+.. . ... +.-+.+..+|.++....
T Consensus 216 ~~~~l~~~~~-d~~i~iwd~~~~~--~~~~~~~~~~~-------------~--------~~~-v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 216 SGNALAYAGH-DSSVTIAYPSAPE--QPPRALITVKL-------------S--------QLP-LRSLLWANESAIVAAGY 270 (377)
T ss_dssp TSSCEEEEET-TTEEC-CEECSTT--SCEEECCCEEC-------------S--------SSC-EEEEEEEETTEEEEEES
T ss_pred CCCEEEEEeC-CCcEEEEECCCCC--CcceeeEeecC-------------C--------CCc-eEEEEEcCCCCEEEEEc
Confidence 5565554444 7789999988532 11222222222 1 111 55567777888777777
Q ss_pred CCeEEEEeCCCCc
Q 016367 345 NGALVSYNPENEE 357 (390)
Q Consensus 345 ~~~l~~yd~~t~~ 357 (390)
+++++.|+.....
T Consensus 271 ~~~~~~~~~~~~~ 283 (377)
T 3dwl_C 271 NYSPILLQGNESG 283 (377)
T ss_dssp SSSEEEECCCC--
T ss_pred CCcEEEEEeCCCc
Confidence 7777788887443
No 122
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=46.82 E-value=1.3e+02 Score=25.19 Aligned_cols=182 Identities=5% Similarity=-0.075 Sum_probs=88.9
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
.+.+.|||..+++....-.... .....+.++|. +++-+.. . . .-.+.+++.......+.
T Consensus 38 dg~v~vw~~~~~~~~~~~~~~~----~~v~~~~~~~~-~~~l~~~--~-~-------------dg~i~~~~~~~~~~~~~ 96 (313)
T 3odt_A 38 DGTVRLWSKDDQWLGTVVYTGQ----GFLNSVCYDSE-KELLLFG--G-K-------------DTMINGVPLFATSGEDP 96 (313)
T ss_dssp TSEEEEEEESSSEEEEEEEECS----SCEEEEEEETT-TTEEEEE--E-T-------------TSCEEEEETTCCTTSCC
T ss_pred CCcEEEEECCCCEEEEEeecCC----ccEEEEEECCC-CCEEEEe--c-C-------------CCeEEEEEeeecCCCCc
Confidence 4678888887766443322211 13446677774 3333332 1 1 23466666665412222
Q ss_pred cCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEeCCeEEEEEeCC
Q 016367 196 LGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVLRGCLSAVHCLD 275 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~~G~L~~~~~~~ 275 (390)
+..+.. ....-..+.++|.....+..+ ..|..+|. .+....+....... ........++.+.++...
T Consensus 97 ~~~~~~-~~~~i~~~~~~~~~l~~~~~d-------~~i~~~d~-~~~~~~~~~~~~~v---~~~~~~~~~~~~l~~~~~- 163 (313)
T 3odt_A 97 LYTLIG-HQGNVCSLSFQDGVVISGSWD-------KTAKVWKE-GSLVYNLQAHNASV---WDAKVVSFSENKFLTASA- 163 (313)
T ss_dssp -CEECC-CSSCEEEEEEETTEEEEEETT-------SEEEEEET-TEEEEEEECCSSCE---EEEEEEETTTTEEEEEET-
T ss_pred ccchhh-cccCEEEEEecCCEEEEEeCC-------CCEEEEcC-CcEEEecccCCCce---eEEEEccCCCCEEEEEEC-
Confidence 211111 111123445566654443332 37888882 22223333222110 122222225666665555
Q ss_pred CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCeEEEEeCCC
Q 016367 276 DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGALVSYNPEN 355 (390)
Q Consensus 276 ~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~t 355 (390)
+..+.+|-.. .....+.. . .... ...+.+.+++.++....++.+..||+++
T Consensus 164 d~~i~i~d~~--------~~~~~~~~-------------~-------~~~~-i~~~~~~~~~~~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 164 DKTIKLWQND--------KVIKTFSG-------------I-------HNDV-VRHLAVVDDGHFISCSNDGLIKLVDMHT 214 (313)
T ss_dssp TSCEEEEETT--------EEEEEECS-------------S-------CSSC-EEEEEEEETTEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEecC--------ceEEEEec-------------c-------Cccc-EEEEEEcCCCeEEEccCCCeEEEEECCc
Confidence 7789999622 12222222 0 1112 5556777777755555677899999998
Q ss_pred CcEEE
Q 016367 356 EELKD 360 (390)
Q Consensus 356 ~~~~~ 360 (390)
++...
T Consensus 215 ~~~~~ 219 (313)
T 3odt_A 215 GDVLR 219 (313)
T ss_dssp CCEEE
T ss_pred hhhhh
Confidence 76543
No 123
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=46.67 E-value=2.1e+02 Score=27.77 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=58.2
Q ss_pred EEEEEECCCceeeeecCCCCCCCCCcceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccC
Q 016367 232 RIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLREN 310 (390)
Q Consensus 232 ~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 310 (390)
.|..+|+.+.+....- ..+.. .-..+... +|++.+.... +..+.||-+... ..++.+..
T Consensus 542 ~v~vwd~~~~~~~~~~-~~h~~---~v~~v~~spdg~~l~sg~~-Dg~i~iwd~~~~------~~~~~~~~--------- 601 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTL-AGHTG---YVSTVAVSPDGSLCASGGK-DGVVLLWDLAEG------KKLYSLEA--------- 601 (694)
T ss_dssp CEEEEETTTCCEEEEE-CCCSS---CEEEEEECTTSSEEEEEET-TSBCEEEETTTT------EEEECCBC---------
T ss_pred eEEEEECCCCcEEEEE-cCCCC---CEEEEEEeCCCCEEEEEeC-CCeEEEEECCCC------ceEEEecC---------
Confidence 6888898876554321 11111 12233333 5777665555 789999987631 22333222
Q ss_pred cCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCeEEEEeCCCCcEEE
Q 016367 311 ARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGALVSYNPENEELKD 360 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~t~~~~~ 360 (390)
... ...+++..++.++....+..+..||+++++...
T Consensus 602 -------------~~~-v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 602 -------------NSV-IHALCFSPNRYWLCAATEHGIKIWDLESKSIVE 637 (694)
T ss_dssp -------------SSC-EEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred -------------CCc-EEEEEEcCCCcEEEEEcCCCEEEEECCCCCChh
Confidence 112 566778778877777778889999999987644
No 124
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=45.70 E-value=1.6e+02 Score=25.93 Aligned_cols=141 Identities=9% Similarity=0.006 Sum_probs=69.2
Q ss_pred CceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEE
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEV 184 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~v 184 (390)
+|.++.... ...+.+|+..+++....-... ......+.+.+... +-+.. . . .-.+.+
T Consensus 217 ~~~~~~~~~--~g~i~~~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~-~l~~~--~-~-------------d~~i~i 273 (425)
T 1r5m_A 217 DDKFVIPGP--KGAIFVYQITEKTPTGKLIGH----HGPISVLEFNDTNK-LLLSA--S-D-------------DGTLRI 273 (425)
T ss_dssp TTEEEEECG--GGCEEEEETTCSSCSEEECCC----SSCEEEEEEETTTT-EEEEE--E-T-------------TSCEEE
T ss_pred CCEEEEEcC--CCeEEEEEcCCCceeeeeccC----CCceEEEEECCCCC-EEEEE--c-C-------------CCEEEE
Confidence 455544444 578999999887543221111 11344677777543 32222 1 1 235788
Q ss_pred EEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEE
Q 016367 185 LTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHL 261 (390)
Q Consensus 185 yss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L 261 (390)
|+..++ .-... .. .....-..+.+ +| +.+.... ...|..+|+.+.+.... ..... ....+
T Consensus 274 ~d~~~~-~~~~~--~~-~~~~~i~~~~~~~~~--~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~-----~i~~~ 336 (425)
T 1r5m_A 274 WHGGNG-NSQNC--FY-GHSQSIVSASWVGDD--KVISCSM------DGSVRLWSLKQNTLLALSIVDGV-----PIFAG 336 (425)
T ss_dssp ECSSSB-SCSEE--EC-CCSSCEEEEEEETTT--EEEEEET------TSEEEEEETTTTEEEEEEECTTC-----CEEEE
T ss_pred EECCCC-ccceE--ec-CCCccEEEEEECCCC--EEEEEeC------CCcEEEEECCCCcEeEecccCCc-----cEEEE
Confidence 888776 32211 00 00011112222 45 2222221 13899999987654332 32221 12223
Q ss_pred EEe-CCeEEEEEeCCCCcEEEEEEee
Q 016367 262 VVL-RGCLSAVHCLDDKGMEIWIMKE 286 (390)
Q Consensus 262 ~~~-~G~L~~~~~~~~~~~~IW~l~~ 286 (390)
... +|.+.++... ...+.||-++.
T Consensus 337 ~~s~~~~~l~~~~~-dg~i~i~~~~~ 361 (425)
T 1r5m_A 337 RISQDGQKYAVAFM-DGQVNVYDLKK 361 (425)
T ss_dssp EECTTSSEEEEEET-TSCEEEEECHH
T ss_pred EEcCCCCEEEEEEC-CCeEEEEECCC
Confidence 222 5666665555 67899999874
No 125
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=45.59 E-value=1.6e+02 Score=25.99 Aligned_cols=147 Identities=15% Similarity=0.024 Sum_probs=77.4
Q ss_pred EeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCC
Q 016367 101 VGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKS 180 (390)
Q Consensus 101 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 180 (390)
.+..+|.|...+.. ...++.+++.++....+..... ....++++|+..+...+.- . ...
T Consensus 80 ~d~~~~~ly~~D~~-~~~I~r~~~~g~~~~~~~~~~~----~~p~glavd~~~g~ly~~d----~------------~~~ 138 (349)
T 3v64_C 80 FHHRRELVFWSDVT-LDRILRANLNGSNVEEVVSTGL----ESPGGLAVDWVHDKLYWTD----S------------GTS 138 (349)
T ss_dssp EETTTTEEEEEETT-TTEEEEEETTSCSCEEEECSSC----SCCCEEEEETTTTEEEEEE----T------------TTT
T ss_pred EeccccEEEEEecc-CCceEEEecCCCCceEEEeCCC----CCccEEEEecCCCeEEEEc----C------------CCC
Confidence 34567888777743 4678888988776444322210 1123788887655432221 1 134
Q ss_pred eEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 181 DVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 181 ~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
.+++++.... .-+.+.. .... ...++.+ +|.+||..... ...|..+|+.......+-- .... .
T Consensus 139 ~I~~~~~dG~-~~~~l~~--~~l~-~P~~iavdp~~g~ly~td~~~------~~~I~r~~~dG~~~~~~~~-~~~~---~ 204 (349)
T 3v64_C 139 RIEVANLDGA-HRKVLLW--QSLE-KPRAIALHPMEGTIYWTDWGN------TPRIEASSMDGSGRRIIAD-THLF---W 204 (349)
T ss_dssp EEEEEETTSC-SCEEEEC--TTCS-CEEEEEEETTTTEEEEEECSS------SCEEEEEETTSCSCEESCC-SSCS---C
T ss_pred eEEEEcCCCC-ceEEEEe--CCCC-CcceEEEecCcCeEEEeccCC------CCEEEEEeCCCCCcEEEEE-CCCC---C
Confidence 6788877654 3222211 1111 1123433 58899986542 2489999987654444311 1111 1
Q ss_pred ceEEEE--eCCeEEEEEeCCCCcEEEEEEe
Q 016367 258 NFHLVV--LRGCLSAVHCLDDKGMEIWIMK 285 (390)
Q Consensus 258 ~~~L~~--~~G~L~~~~~~~~~~~~IW~l~ 285 (390)
-.-|+. .+|.|+++... ... |+..+
T Consensus 205 PnGla~d~~~~~lY~aD~~-~~~--I~~~~ 231 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAK-HHV--IERAN 231 (349)
T ss_dssp EEEEEEETTTTEEEEEETT-TTE--EEEEE
T ss_pred cceEEEeCCCCEEEEEECC-CCE--EEEEe
Confidence 123343 46788887765 444 44444
No 126
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=45.14 E-value=1.5e+02 Score=25.50 Aligned_cols=33 Identities=6% Similarity=0.054 Sum_probs=21.8
Q ss_pred EEeeCCceEeeeeC-----------CeEEEEeCCCCcEEEEEEe
Q 016367 332 CDWKNGEILLEYAN-----------GALVSYNPENEELKDLVIF 364 (390)
Q Consensus 332 ~~~~~g~il~~~~~-----------~~l~~yd~~t~~~~~v~~~ 364 (390)
++..+|.|++.... ..++.||++.+.++.+...
T Consensus 235 ~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~ 278 (322)
T 2fp8_A 235 KRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLP 278 (322)
T ss_dssp EECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECC
T ss_pred EECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECC
Confidence 55566777666533 4589999987666666543
No 127
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=44.30 E-value=1.5e+02 Score=25.20 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=55.6
Q ss_pred EEEEEECCCceeeeecCCCCCCCCCcceEEEE-eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccC
Q 016367 232 RIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV-LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLREN 310 (390)
Q Consensus 232 ~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 310 (390)
.|..+|+.+.+.......... .-..+.. -+|.+.+.... +..+.||-+.. +..+..+..
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~s~-Dg~i~iwd~~~------~~~~~~~~~--------- 255 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTG----YLNTVTVSPDGSLCASGGK-DGQAMLWDLNE------GKHLYTLDG--------- 255 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEET-TCEEEEEETTT------TEEEEEEEC---------
T ss_pred EEEEEECCCCceeeEecCCCC----cEEEEEECCCCCEEEEEeC-CCeEEEEEecc------CceeeeecC---------
Confidence 577788877655433211111 1222332 25777665555 77899997652 344444443
Q ss_pred cCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCeEEEEeCCCCcEE
Q 016367 311 ARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGALVSYNPENEELK 359 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~t~~~~ 359 (390)
.. . ...+++.+++.++....++.+..||++++...
T Consensus 256 ----~~---------~-v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 256 ----GD---------I-INALCFSPNRYWLCAATGPSIKIWDLEGKIIV 290 (340)
T ss_dssp ----SS---------C-EEEEEECSSSSEEEEEETTEEEEEETTTTEEE
T ss_pred ----Cc---------e-EEeeecCCCCceeeccCCCEEEEEECCCCeEE
Confidence 11 1 55556666777777777888999999887653
No 128
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=44.28 E-value=49 Score=28.43 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=16.4
Q ss_pred EEEEeeCCceEeeeeCCeEEEEeCCCCcEEE
Q 016367 330 VVCDWKNGEILLEYANGALVSYNPENEELKD 360 (390)
Q Consensus 330 ~~~~~~~g~il~~~~~~~l~~yd~~t~~~~~ 360 (390)
.+.+..+|.|++...+..++.||.+.+....
T Consensus 259 ~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 259 SPVIGNTDTIYFGSYDGHLYAINPDGTEKWN 289 (330)
T ss_dssp CCEECTTSCEEEECTTCEEEEECTTSCEEEE
T ss_pred cceEcCCCeEEEecCCCCEEEECCCCcEEEE
Confidence 3444335555555555577777764333333
No 129
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=44.08 E-value=2.3e+02 Score=27.47 Aligned_cols=151 Identities=13% Similarity=-0.079 Sum_probs=77.0
Q ss_pred EeecCceEEeeeccccccEEEEcCCCcce--ecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCC
Q 016367 101 VGSCNGLLCVSDALYFNPIIVCNPFTGSY--LELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPR 178 (390)
Q Consensus 101 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 178 (390)
++..+|.|...+.. ..++..+++-.... ..+... .....|+++|..++.-.+. . . .
T Consensus 47 ~~~~~~~ly~sD~~-~~~I~r~~~~g~~~~~~v~~~~-----~~~P~GlAvD~~~~~ly~~--d--~------------~ 104 (619)
T 3s94_A 47 FVFSHGLIYWSDVS-EEAIKRTEFNKTESVQNVVVSG-----LLSPDGLACDWLGEKLYWT--D--S------------E 104 (619)
T ss_dssp EETTTTEEEEEETT-TTEEEEEEC-----CEEEECSS-----CSCEEEEEEETTTTEEEEE--E--T------------T
T ss_pred EEeCCCEEEEEECC-CCeEEEEEccCCCceEEEEeCC-----CCCcCeEEEEecCCEEEEE--e--C------------C
Confidence 45567888887753 45688888766531 122211 1134588999866543322 1 1 1
Q ss_pred CCeEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCC
Q 016367 179 KSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLS 255 (390)
Q Consensus 179 ~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~ 255 (390)
...+++++.... .=+.+.. ..+. ...++.+ +|.+||-.... ...|..+++.......+--.....
T Consensus 105 ~~~I~v~~~dG~-~~~~l~~--~~l~-~P~~Iavdp~~g~ly~tD~g~------~~~I~r~~~dG~~~~~l~~~~~~~-- 172 (619)
T 3s94_A 105 TNRIEVSNLDGS-LRKVLFW--QELD-QPRAIALDPSSGFMYWTDWGE------VPKIERAGMDGSSRFIIINSEIYW-- 172 (619)
T ss_dssp TTEEEEEETTSC-SCEEEEC--SSCS-CCCCEEEETTTTEEEEEECSS------SCEEEEEETTSCSCEEEECSSCSS--
T ss_pred CCEEEEEECCCC-CEEEEEe--CCCC-CCceEEEecCCCeEEEeccCC------CCEEEEEECCCCceEEEEeCCCCC--
Confidence 357888887654 2222211 1111 1335655 58999987542 237999998765544442111100
Q ss_pred CcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCC
Q 016367 256 VCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYK 288 (390)
Q Consensus 256 ~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~ 288 (390)
.....+...+++||++... . -.||+.+-.+
T Consensus 173 P~Glald~~~~~LY~aD~~-~--~~I~~~~~dG 202 (619)
T 3s94_A 173 PNGLTLDYEEQKLYWADAK-L--NFIHKSNLDG 202 (619)
T ss_dssp EEEEEEETTTTEEEEEETT-T--CCEEEESSSC
T ss_pred CcEEEEEccCCEEEEEeCC-C--CeEEEecCCC
Confidence 0122222236889887654 3 3466666433
No 130
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=44.00 E-value=1.5e+02 Score=25.28 Aligned_cols=97 Identities=18% Similarity=0.085 Sum_probs=57.9
Q ss_pred EEEEEECCCcee-eeecCCCCCCCCCcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccC
Q 016367 232 RIMSFDLAEEDF-GEIGLPDCGSLSVCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLREN 310 (390)
Q Consensus 232 ~il~fD~~~e~~-~~i~lP~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~ 310 (390)
.|..+|+.+.+. ..+++|... ...-+...++.|++.... ... +++.+ ...-..+.+|+.
T Consensus 45 ~v~~iD~~tg~v~~~i~l~~~~----fgeGi~~~g~~lyv~t~~-~~~--v~viD----~~t~~v~~~i~~--------- 104 (266)
T 2iwa_A 45 SVRQVALQTGKVENIHKMDDSY----FGEGLTLLNEKLYQVVWL-KNI--GFIYD----RRTLSNIKNFTH--------- 104 (266)
T ss_dssp EEEEEETTTCCEEEEEECCTTC----CEEEEEEETTEEEEEETT-CSE--EEEEE----TTTTEEEEEEEC---------
T ss_pred EEEEEECCCCCEEEEEecCCCc----ceEEEEEeCCEEEEEEec-CCE--EEEEE----CCCCcEEEEEEC---------
Confidence 899999987665 456776643 223455557788886554 334 44455 223456677776
Q ss_pred cCcchhhhhccCCCCcceEEEEEeeCCc-eEeeeeCCeEEEEeCCCCcE-EEEEE
Q 016367 311 ARPHLEMLKKSGLGRGSSQVVCDWKNGE-ILLEYANGALVSYNPENEEL-KDLVI 363 (390)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-il~~~~~~~l~~yd~~t~~~-~~v~~ 363 (390)
. . +.+ + ++..+|+ +++...++.+..+|++|.+. +.|..
T Consensus 105 ----g-~----~~g---~---glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 105 ----Q-M----KDG---W---GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp ----C-S----SSC---C---EEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ----C-C----CCe---E---EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 2 1 111 2 3444454 66555567899999999765 44443
No 131
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=43.27 E-value=1.6e+02 Score=25.35 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=47.2
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA 344 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~ 344 (390)
+|++.+.... +..+.||-+... ...+..+..+.- .. .. +.-+.+.+++.+++...
T Consensus 118 ~g~~las~s~-D~~v~iwd~~~~--~~~~~~~~~~~~-------------h~--------~~-v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 118 DGYYLATCSR-DKSVWIWETDES--GEEYECISVLQE-------------HS--------QD-VKHVIWHPSEALLASSS 172 (330)
T ss_dssp TSCEEEEEET-TSCEEEEECCTT--CCCCEEEEEECC-------------CS--------SC-EEEEEECSSSSEEEEEE
T ss_pred CCCEEEEEeC-CCEEEEEeccCC--CCCeEEEEEecc-------------CC--------Cc-eEEEEECCCCCEEEEEc
Confidence 3444444444 778999988543 224555544442 11 11 55556666777666554
Q ss_pred -CCeEEEEeCCCCcEEEE-EEeCCCCceEEEeee
Q 016367 345 -NGALVSYNPENEELKDL-VIFDPPKWFCSIVHV 376 (390)
Q Consensus 345 -~~~l~~yd~~t~~~~~v-~~~~~~~~~~~~~y~ 376 (390)
++.+..||..++.++.+ .+.+.......+.+.
T Consensus 173 ~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~ 206 (330)
T 2hes_X 173 YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFD 206 (330)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEec
Confidence 55688888877765554 233333333333443
No 132
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=42.85 E-value=1.5e+02 Score=25.18 Aligned_cols=106 Identities=9% Similarity=-0.010 Sum_probs=0.0
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCC--CCCCCCcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCC
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPD--CGSLSVCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKV 289 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~--~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~ 289 (390)
+|.+|...... ..|..+|+.+.+.... +++. .. ....+...+..+++.... ...+.+|-++
T Consensus 10 ~~~~~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~----~~~~~s~dg~~~~v~~~~-~~~i~~~d~~---- 73 (349)
T 1jmx_B 10 GHEYMIVTNYP-------NNLHVVDVASDTVYKSCVMPDKFGP----GTAMMAPDNRTAYVLNNH-YGDIYGIDLD---- 73 (349)
T ss_dssp TCEEEEEEETT-------TEEEEEETTTTEEEEEEECSSCCSS----CEEEECTTSSEEEEEETT-TTEEEEEETT----
T ss_pred CCEEEEEeCCC-------CeEEEEECCCCcEEEEEecCCCCCC----ceeEECCCCCEEEEEeCC-CCcEEEEeCC----
Q ss_pred CCceEEEEEEccCCCcccccCcCcchhhhhccCC-----CCcceEEEEEeeCCceEeeee-------------CCeEEEE
Q 016367 290 RESWSKDYIIGTYLPASLRENARPHLEMLKKSGL-----GRGSSQVVCDWKNGEILLEYA-------------NGALVSY 351 (390)
Q Consensus 290 ~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~il~~~~-------------~~~l~~y 351 (390)
.-.....+.. .. ... ...+.+.++|+.++... ...+..|
T Consensus 74 --t~~~~~~~~~--------------------~~~~~~~~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~ 130 (349)
T 1jmx_B 74 --TCKNTFHANL--------------------SSVPGEVGRS-MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVF 130 (349)
T ss_dssp --TTEEEEEEES--------------------CCSTTEEEEC-SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEE
T ss_pred --CCcEEEEEEc--------------------cccccccccc-ccceEECCCCCEEEEEcccccccccccccCCCeEEEE
Q ss_pred eCCCCc
Q 016367 352 NPENEE 357 (390)
Q Consensus 352 d~~t~~ 357 (390)
|+++++
T Consensus 131 d~~~~~ 136 (349)
T 1jmx_B 131 STADGL 136 (349)
T ss_dssp EGGGGG
T ss_pred ECCCcc
No 133
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=41.94 E-value=2.1e+02 Score=26.33 Aligned_cols=69 Identities=12% Similarity=0.054 Sum_probs=44.4
Q ss_pred CCeEEEE-EeCC-----CCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc
Q 016367 265 RGCLSAV-HCLD-----DKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE 338 (390)
Q Consensus 265 ~G~L~~~-~~~~-----~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (390)
+++|++. .... ...=+||+++ ...+..+.+|+. ... ..-+.+..+|+
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID----~~T~kvv~~I~v-------------g~~----------P~gia~spDg~ 382 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLN----AETGERINKIEL-------------GHE----------IDSINVSQDAE 382 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEE----TTTCCEEEEEEE-------------EEE----------ECEEEECCSSS
T ss_pred CCEEEEEecccccccccCCCCEEEEEE----CCCCeEEEEEEC-------------CCC----------cCeEEEccCCC
Confidence 4678883 3211 1245789988 446778888886 221 33346777777
Q ss_pred -eEeeee--CCeEEEEeCCCCcEEE
Q 016367 339 -ILLEYA--NGALVSYNPENEELKD 360 (390)
Q Consensus 339 -il~~~~--~~~l~~yd~~t~~~~~ 360 (390)
.++... ++.+..||..|.+..+
T Consensus 383 ~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 383 PLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp CEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEEEcCCCCeEEEEECCCCCEEE
Confidence 555544 6789999999998754
No 134
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=41.62 E-value=11 Score=20.29 Aligned_cols=22 Identities=36% Similarity=0.712 Sum_probs=16.9
Q ss_pred eecCceEEeeeccccccEEEEcCCC
Q 016367 102 GSCNGLLCVSDALYFNPIIVCNPFT 126 (390)
Q Consensus 102 ~s~~GLl~~~~~~~~~~~~V~NP~T 126 (390)
++|.||-|.... +.+-||-|-|
T Consensus 15 dcceglecwkrr---rsfevcvpkt 36 (37)
T 3s3x_D 15 DCCEGLECWKRR---RSFEVCVPKT 36 (37)
T ss_dssp CBCTTEEEECCS---SSCCEEEECC
T ss_pred chhhhHHHHHhc---cceeeecCCC
Confidence 578999998775 5677887765
No 135
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=41.14 E-value=1.8e+02 Score=25.32 Aligned_cols=145 Identities=13% Similarity=-0.067 Sum_probs=71.3
Q ss_pred eecCceEEeeeccccccEEEEcCCCcce--ecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCC
Q 016367 102 GSCNGLLCVSDALYFNPIIVCNPFTGSY--LELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRK 179 (390)
Q Consensus 102 ~s~~GLl~~~~~~~~~~~~V~NP~T~~~--~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 179 (390)
+..+|.|...+.. ...+..+++.++.. ..+.... ....++++|+..+...+.- . ..
T Consensus 43 d~~~~~lyw~D~~-~~~I~r~~~~g~~~~~~~~~~~l-----~~p~glavd~~~g~ly~~d----~------------~~ 100 (318)
T 3sov_A 43 VFSHGLIYWSDVS-EEAIKRTEFNKTESVQNVVVSGL-----LSPDGLACDWLGEKLYWTD----S------------ET 100 (318)
T ss_dssp EGGGTEEEEEETT-TTEEEEEETTSSSCCCEEEEECC-----SCCCEEEEETTTTEEEEEE----T------------TT
T ss_pred EeCCCEEEEEECC-CCcEEEEEccCCCceEEEEcCCC-----CCccEEEEEcCCCeEEEEE----C------------CC
Confidence 3345666666642 45677777776532 1111110 1123788887555433221 1 13
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSV 256 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 256 (390)
..+++++.... .-+.+.. ... ....++.+ +|.+||..... ...|..+|+.......+--. ...
T Consensus 101 ~~I~~~~~dG~-~~~~l~~--~~~-~~P~giavdp~~g~ly~td~~~------~~~I~r~~~dG~~~~~~~~~-~l~--- 166 (318)
T 3sov_A 101 NRIEVSNLDGS-LRKVLFW--QEL-DQPRAIALDPSSGFMYWTDWGE------VPKIERAGMDGSSRFIIINS-EIY--- 166 (318)
T ss_dssp TEEEEEETTSC-SCEEEEC--SSC-SSEEEEEEEGGGTEEEEEECSS------SCEEEEEETTSCSCEEEECS-SCS---
T ss_pred CEEEEEECCCC-cEEEEEe--CCC-CCccEEEEeCCCCEEEEEecCC------CCEEEEEEcCCCCeEEEEEC-CCC---
Confidence 46788887654 2222211 011 11234444 58999986431 23899999876544333111 111
Q ss_pred cceEEEE--eCCeEEEEEeCCCCcEEEEEEe
Q 016367 257 CNFHLVV--LRGCLSAVHCLDDKGMEIWIMK 285 (390)
Q Consensus 257 ~~~~L~~--~~G~L~~~~~~~~~~~~IW~l~ 285 (390)
.-.-|+. .+|.||++... ... |+..+
T Consensus 167 ~Pnglavd~~~~~lY~aD~~-~~~--I~~~d 194 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAK-LNF--IHKSN 194 (318)
T ss_dssp CEEEEEEETTTTEEEEEETT-TTE--EEEEE
T ss_pred CccEEEEeccCCEEEEEECC-CCE--EEEEc
Confidence 1123343 36788887765 444 44444
No 136
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=40.44 E-value=1.6e+02 Score=24.43 Aligned_cols=147 Identities=12% Similarity=-0.011 Sum_probs=75.2
Q ss_pred EEeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCC
Q 016367 100 VVGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRK 179 (390)
Q Consensus 100 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 179 (390)
.++..+|.|...+.. ...+.++++.++....+-... .....++++|+..+...+.- . ..
T Consensus 42 ~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~~~~~~----~~~p~~ia~d~~~~~lyv~d----~------------~~ 100 (267)
T 1npe_A 42 AFDCVDKVVYWTDIS-EPSIGRASLHGGEPTTIIRQD----LGSPEGIALDHLGRTIFWTD----S------------QL 100 (267)
T ss_dssp EEETTTTEEEEEETT-TTEEEEEESSSCCCEEEECTT----CCCEEEEEEETTTTEEEEEE----T------------TT
T ss_pred EEecCCCEEEEEECC-CCEEEEEecCCCCcEEEEECC----CCCccEEEEEecCCeEEEEE----C------------CC
Confidence 445557777777652 467899999876543332111 11345788887654322221 1 13
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeec-CCCCCCCC
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIG-LPDCGSLS 255 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~-lP~~~~~~ 255 (390)
..+.+++.... .-+.+.. .... ...++.+ +|.+||..... ....|..+++.......+. .+..
T Consensus 101 ~~I~~~~~~g~-~~~~~~~--~~~~-~P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~dg~~~~~~~~~~~~---- 167 (267)
T 1npe_A 101 DRIEVAKMDGT-QRRVLFD--TGLV-NPRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMDGTNRRILAQDNLG---- 167 (267)
T ss_dssp TEEEEEETTSC-SCEEEEC--SSCS-SEEEEEEETTTTEEEEEECCS-----SSCEEEEEETTSCCCEEEECTTCS----
T ss_pred CEEEEEEcCCC-CEEEEEE--CCCC-CccEEEEeeCCCEEEEEECCC-----CCcEEEEEecCCCCcEEEEECCCC----
Confidence 46778887644 3222211 1111 1224444 58899986531 0137888888765544432 1111
Q ss_pred CcceEEEEe--CCeEEEEEeCCCCcEEEE
Q 016367 256 VCNFHLVVL--RGCLSAVHCLDDKGMEIW 282 (390)
Q Consensus 256 ~~~~~L~~~--~G~L~~~~~~~~~~~~IW 282 (390)
.-..++.. ++.|+++... ...+.+.
T Consensus 168 -~P~gia~d~~~~~lyv~d~~-~~~I~~~ 194 (267)
T 1npe_A 168 -LPNGLTFDAFSSQLCWVDAG-THRAECL 194 (267)
T ss_dssp -CEEEEEEETTTTEEEEEETT-TTEEEEE
T ss_pred -CCcEEEEcCCCCEEEEEECC-CCEEEEE
Confidence 12233332 4678887665 4444433
No 137
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=40.21 E-value=1.6e+02 Score=24.41 Aligned_cols=197 Identities=14% Similarity=0.089 Sum_probs=97.7
Q ss_pred EEeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCC
Q 016367 100 VVGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRK 179 (390)
Q Consensus 100 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 179 (390)
+....+|-+.+.... ...+.++||. ++...++.+... ....++.+|+.. ..-+. . . ..
T Consensus 20 i~~d~~g~l~v~~~~-~~~v~~~d~~-~~~~~~~~~~~~---~~~~~i~~~~~g-~l~v~--~--~------------~~ 77 (299)
T 2z2n_A 20 ITVSDKGKVWITQHK-ANMISCINLD-GKITEYPLPTPD---AKVMCLTISSDG-EVWFT--E--N------------AA 77 (299)
T ss_dssp EEECTTSCEEEEETT-TTEEEEECTT-CCEEEEECSSTT---CCEEEEEECTTS-CEEEE--E--T------------TT
T ss_pred eEECCCCCEEEEecC-CCcEEEEcCC-CCeEEecCCccc---CceeeEEECCCC-CEEEe--C--C------------CC
Confidence 444456666655431 3579999998 776655432111 134467777643 22221 1 1 01
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
-.+..|+.. + ..+... .|... ....++.+ +|.+|...... ..|..+|. +.++..+..|.... .
T Consensus 78 ~~i~~~~~~-g-~~~~~~-~~~~~-~~~~~i~~~~~g~l~v~~~~~-------~~i~~~d~-~g~~~~~~~~~~~~---~ 142 (299)
T 2z2n_A 78 NKIGRITKK-G-IIKEYT-LPNPD-SAPYGITEGPNGDIWFTEMNG-------NRIGRITD-DGKIREYELPNKGS---Y 142 (299)
T ss_dssp TEEEEECTT-S-CEEEEE-CSSTT-CCEEEEEECTTSCEEEEETTT-------TEEEEECT-TCCEEEEECSSTTC---C
T ss_pred CeEEEECCC-C-cEEEEe-CCCcC-CCceeeEECCCCCEEEEecCC-------ceEEEECC-CCCEEEecCCCCCC---C
Confidence 245666654 4 444332 11111 11223444 47665543321 37999999 66666665553221 2
Q ss_pred ceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 258 NFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 258 ~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
...+... +|.|++.... ...+ +.++.. ..... +.. .. . ... ..-+++..+
T Consensus 143 ~~~i~~~~~g~l~v~~~~-~~~i--~~~~~~---g~~~~---~~~-------------~~-----~-~~~-~~~i~~~~~ 193 (299)
T 2z2n_A 143 PSFITLGSDNALWFTENQ-NNAI--GRITES---GDITE---FKI-------------PT-----P-ASG-PVGITKGND 193 (299)
T ss_dssp EEEEEECTTSCEEEEETT-TTEE--EEECTT---CCEEE---EEC-------------SS-----T-TCC-EEEEEECTT
T ss_pred CceEEEcCCCCEEEEeCC-CCEE--EEEcCC---CcEEE---eeC-------------CC-----C-CCc-ceeEEECCC
Confidence 2334443 5777775543 3333 333321 12221 222 00 0 001 334556667
Q ss_pred CceEeeee-CCeEEEEeCCCCcEEEEEE
Q 016367 337 GEILLEYA-NGALVSYNPENEELKDLVI 363 (390)
Q Consensus 337 g~il~~~~-~~~l~~yd~~t~~~~~v~~ 363 (390)
|.+++... ...+..||+ +++++.+..
T Consensus 194 g~l~v~~~~~~~i~~~~~-~g~~~~~~~ 220 (299)
T 2z2n_A 194 DALWFVEIIGNKIGRITT-SGEITEFKI 220 (299)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEEC
T ss_pred CCEEEEccCCceEEEECC-CCcEEEEEC
Confidence 77766653 567999999 777766533
No 138
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=40.17 E-value=1.8e+02 Score=25.00 Aligned_cols=111 Identities=10% Similarity=-0.008 Sum_probs=61.2
Q ss_pred EEEEEECCCceee-eecCCCCCCCCCcceEEEE-eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCccccc
Q 016367 232 RIMSFDLAEEDFG-EIGLPDCGSLSVCNFHLVV-LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRE 309 (390)
Q Consensus 232 ~il~fD~~~e~~~-~i~lP~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 309 (390)
.|..+|+.+.+.. .+..... .-..+.. -+|.+.+.... +..+.||-++.. .....+.-
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~-----~v~~l~~spd~~~l~s~s~-dg~i~iwd~~~~------~~~~~~~~-------- 246 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAM-----PIRSLTFSPDSQLLVTASD-DGYIKIYDVQHA------NLAGTLSG-------- 246 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSS-----CCCEEEECTTSCEEEEECT-TSCEEEEETTTC------CEEEEECC--------
T ss_pred eEEEEECCCCcEEEEEcccCC-----ceeEEEEcCCCCEEEEEcC-CCeEEEEECCCc------ceeEEEcC--------
Confidence 6888998876543 2332211 1122333 25666665555 778999987631 13333332
Q ss_pred CcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-CCeEEEEeCCCCcEEEEEEeCCCCceEEEeeec
Q 016367 310 NARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA-NGALVSYNPENEELKDLVIFDPPKWFCSIVHVE 377 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~~ 377 (390)
.... +.-+++.+++..++... ++.+..||+++++.... +.+.......+.+.+
T Consensus 247 -------------h~~~-v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~-~~~h~~~v~~v~~s~ 300 (321)
T 3ow8_A 247 -------------HASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT-FFDHQDQVWGVKYNG 300 (321)
T ss_dssp -------------CSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE-ECCCSSCEEEEEECT
T ss_pred -------------CCCc-eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE-EcCCCCcEEEEEECC
Confidence 1112 55567777777666554 66799999998875432 333333344444443
No 139
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=39.57 E-value=1.9e+02 Score=25.02 Aligned_cols=47 Identities=15% Similarity=0.134 Sum_probs=30.6
Q ss_pred CcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEeCCeEEEEE
Q 016367 214 GSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVLRGCLSAVH 272 (390)
Q Consensus 214 G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~~G~L~~~~ 272 (390)
|.+||..... ..|..+|+.+.+...+..|... ..-...-+|++.+..
T Consensus 61 ~~l~~~d~~~-------~~i~~~d~~~~~~~~~~~~~~v-----~~i~~~~dg~l~v~~ 107 (326)
T 2ghs_A 61 GTAWWFNILE-------RELHELHLASGRKTVHALPFMG-----SALAKISDSKQLIAS 107 (326)
T ss_dssp TEEEEEEGGG-------TEEEEEETTTTEEEEEECSSCE-----EEEEEEETTEEEEEE
T ss_pred CEEEEEECCC-------CEEEEEECCCCcEEEEECCCcc-----eEEEEeCCCeEEEEE
Confidence 7899987543 3899999998887777665322 111223467877743
No 140
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=39.54 E-value=1.9e+02 Score=25.02 Aligned_cols=193 Identities=7% Similarity=-0.121 Sum_probs=0.0
Q ss_pred eEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEE
Q 016367 107 LLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLT 186 (390)
Q Consensus 107 Ll~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vys 186 (390)
+|++... ..+...++.+++...+-+... ...++.+|+..+.-.+.- .....+..++
T Consensus 3 ~ll~~~~---~~I~~i~~~~~~~~~~~~~~~-----~p~g~~~d~~~~~ly~~D----------------~~~~~I~~~~ 58 (316)
T 1ijq_A 3 YLFFTNR---HEVRKMTLDRSEYTSLIPNLR-----NVVALDTEVASNRIYWSD----------------LSQRMICSTQ 58 (316)
T ss_dssp EEEEECB---SSEEEEETTSCCCEEEECSCS-----SEEEEEEETTTTEEEEEE----------------TTTTEEEEEE
T ss_pred EEEEECC---CeEEEEECCCcceEehhcCCC-----ceEEEEEEeCCCEEEEEE----------------CCCCcEEEEE
Q ss_pred eCC---CCcccccCCCCcccCCCCceEE-ECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEE
Q 016367 187 VGI---DHTWRYLGPVPWRLNPGASEAL-LNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLV 262 (390)
Q Consensus 187 s~~---~~~W~~~~~~p~~~~~~~~~v~-~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~ 262 (390)
..+ + +....-..........-++- .+|.+||..... ..|..+|+.......+--...... ....+.
T Consensus 59 ~~g~~~~-~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~-------~~I~~~~~~g~~~~~~~~~~~~~P--~~iavd 128 (316)
T 1ijq_A 59 LDRAHGV-SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFRENGSKP--RAIVVD 128 (316)
T ss_dssp C---------CEEEECSSCSCCCEEEEETTTTEEEEEETTT-------TEEEEEETTSSSEEEEEECTTCCE--EEEEEE
T ss_pred CCCCCCC-cccEEEEeCCCCCcCEEEEeecCCeEEEEECCC-------CEEEEEeCCCCceEEEEECCCCCc--ceEEeC
Q ss_pred EeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEee
Q 016367 263 VLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLE 342 (390)
Q Consensus 263 ~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~ 342 (390)
..+|.|++... ...-.|++..-++....-.....+.. ..-+++..++..++.
T Consensus 129 p~~g~ly~~d~--~~~~~I~~~~~dG~~~~~~~~~~~~~--------------------------P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 129 PVHGFMYWTDW--GTPAKIKKGGLNGVDIYSLVTENIQW--------------------------PNGITLDLLSGRLYW 180 (316)
T ss_dssp TTTTEEEEEEC--SSSCEEEEEETTSCCEEEEECSSCSC--------------------------EEEEEEETTTTEEEE
T ss_pred CCCCEEEEEcc--CCCCeEEEEcCCCCCeEEEEECCCCC--------------------------ceEEEEeccCCEEEE
Q ss_pred ee--CCeEEEEeCCCCcEEEE
Q 016367 343 YA--NGALVSYNPENEELKDL 361 (390)
Q Consensus 343 ~~--~~~l~~yd~~t~~~~~v 361 (390)
.+ ...+..+|++....+.+
T Consensus 181 ~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp EETTTTEEEEEETTSCSCEEE
T ss_pred EECCCCeEEEEecCCCceEEE
No 141
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=39.33 E-value=2e+02 Score=25.34 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=23.4
Q ss_pred EEEeeCCceEeeeeCCeEEEEeCCCCcEEEEE
Q 016367 331 VCDWKNGEILLEYANGALVSYNPENEELKDLV 362 (390)
Q Consensus 331 ~~~~~~g~il~~~~~~~l~~yd~~t~~~~~v~ 362 (390)
+++..+|+.++....+.+..||.+|++++.+.
T Consensus 310 ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 310 MTIDQQRNLMLTLDGGNVNVYDISQPEPKLLR 341 (361)
T ss_dssp EEEETTTTEEEEECSSCEEEEECSSSSCEEEE
T ss_pred EEECCCCCEEEEeCCCeEEEEECCCCcceeeE
Confidence 35677787555554477999999999777774
No 142
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=39.14 E-value=2.2e+02 Score=25.71 Aligned_cols=215 Identities=11% Similarity=-0.078 Sum_probs=102.1
Q ss_pred EeecCceEEeeeccccccEEEEcCCCcc----eecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCC
Q 016367 101 VGSCNGLLCVSDALYFNPIIVCNPFTGS----YLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGW 176 (390)
Q Consensus 101 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~ 176 (390)
.+..+|.|.+.+.. ...++..++..+. ...+-.. ......++++|...+...+.- .
T Consensus 119 ~d~~~~~lywsD~~-~~~I~~~~~~g~~~~~~~~~~~~~----~~~~p~glavD~~~~~lY~~d----~----------- 178 (400)
T 3p5b_L 119 TEVASNRIYWSDLS-QRMICSTQLDRAHGVSSYDTVISR----DIQAPDGLAVDWIHSNIYWTD----S----------- 178 (400)
T ss_dssp EETTTTEEEEEETT-TTEEEEEEC------CCCEEEECS----SCSCEEEEEEETTTTEEEEEE----T-----------
T ss_pred eeeccCceEEEecC-CCeEEEEEcccCCCCCcceEEEeC----CCCCcccEEEEecCCceEEEE----C-----------
Confidence 34456777666642 3567777765421 1111111 111345888887655433221 1
Q ss_pred CCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCC
Q 016367 177 PRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGS 253 (390)
Q Consensus 177 ~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~ 253 (390)
....++++++... .-+.+.. .... ...++.+ +|.+||..... ...|..+|+....-..+-.. ...
T Consensus 179 -~~~~I~~~~~~g~-~~~~l~~--~~~~-~P~~iavdp~~g~ly~td~~~------~~~I~~~~~dG~~~~~~~~~-~l~ 246 (400)
T 3p5b_L 179 -VLGTVSVADTKGV-KRKTLFR--ENGS-KPRAIVVDPVHGFMYWTDWGT------PAKIKKGGLNGVDIYSLVTE-NIQ 246 (400)
T ss_dssp -TTTEEEEECTTTC-SEEEEEE--CSSC-CEEEEEEETTTTEEEEEECSS------SCCEEEEETTSCSCEEEECS-SCS
T ss_pred -CCCeEEEEeCCCC-ceEEEEe--CCCC-CcceEEEecccCeEEEEeCCC------CCEEEEEeCCCCccEEEEEC-CCC
Confidence 1246777777655 4333211 0111 1234444 58999986532 13788999876544443111 110
Q ss_pred CCCcceEEEE--eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEE
Q 016367 254 LSVCNFHLVV--LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVV 331 (390)
Q Consensus 254 ~~~~~~~L~~--~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (390)
.-.-|+. .++.||++... .. .||+.+-.+ ....... . .. .. . ..|.
T Consensus 247 ---~P~glavd~~~~~lY~aD~~-~~--~I~~~d~dG-~~~~~~~-~-~~-------------~~---------l-~~P~ 294 (400)
T 3p5b_L 247 ---WPNGITLDLLSGRLYWVDSK-LH--SISSIDVNG-GNRKTIL-E-DE-------------KR---------L-AHPF 294 (400)
T ss_dssp ---CEEEEEEETTTTEEEEEETT-TT--EEEEEETTS-CCCEEEE-E-CS-------------ST---------T-SSEE
T ss_pred ---ceEEEEEEeCCCEEEEEECC-CC--EEEEEeCCC-CccEEEE-e-CC-------------CC---------C-CCCE
Confidence 1122333 36788887665 33 455555333 2221111 1 10 01 1 2333
Q ss_pred EEe-eCCceEeeee-CCeEEEEeCCCCcEEEEEEeCCCCceEEEeeeccc
Q 016367 332 CDW-KNGEILLEYA-NGALVSYNPENEELKDLVIFDPPKWFCSIVHVESL 379 (390)
Q Consensus 332 ~~~-~~g~il~~~~-~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~~sL 379 (390)
++. .++.|++... ...+..+|..+++..+.-..+...-..+.+|.+..
T Consensus 295 gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~ 344 (400)
T 3p5b_L 295 SLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLT 344 (400)
T ss_dssp EEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGG
T ss_pred EEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeecc
Confidence 332 2445666553 45699999776654443333344445566665543
No 143
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=38.94 E-value=75 Score=23.52 Aligned_cols=40 Identities=10% Similarity=0.312 Sum_probs=28.7
Q ss_pred ccEEEEcCCCc-ceecccCccCCCCcceEEEEEEecCCCCeEEEEEE
Q 016367 117 NPIIVCNPFTG-SYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIV 162 (390)
Q Consensus 117 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 162 (390)
-.++..||.|+ .|+. .... ...+.+.+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p--~g~~----~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVP--TSKH----AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEE--SCSS----CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEe--CCCC----ceEEEEEEcCCCCEEEEEEcc
Confidence 46899999996 8854 2221 135567789888899999854
No 144
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=38.77 E-value=3.2e+02 Score=27.52 Aligned_cols=65 Identities=12% Similarity=0.010 Sum_probs=35.9
Q ss_pred ceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEE--eCCeEEEEEeCCCCcEEEE
Q 016367 208 SEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVV--LRGCLSAVHCLDDKGMEIW 282 (390)
Q Consensus 208 ~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~--~~G~L~~~~~~~~~~~~IW 282 (390)
.++.+ +|.|||..... ..|.++|+.......+... ... .-..|++ .+|.||+....... .||
T Consensus 474 ~GLAvD~~~~~LY~tD~~~-------~~I~v~~ldG~~~~~l~~~-~l~---~P~gIaVDp~~g~LYwtD~g~~~--~I~ 540 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFRE-NGS---KPRAIVVDPVHGFMYWTDWGTPA--KIK 540 (791)
T ss_dssp CEEEEETTTTEEEEEETTT-------TEEEEEETTSSSEEEEEEC-TTC---CEEEEEEETTTTEEEEEECSSSC--EEE
T ss_pred ceeeeeecCCcEEEEecCC-------CeEEEEeCCCCeEEEEEeC-CCC---CcceEEEecCCCCEEEecCCCCC--eEE
Confidence 34555 46899986543 3899999987655444211 110 1223444 46888886653123 455
Q ss_pred EEe
Q 016367 283 IMK 285 (390)
Q Consensus 283 ~l~ 285 (390)
+..
T Consensus 541 ~~~ 543 (791)
T 3m0c_C 541 KGG 543 (791)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 145
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=38.49 E-value=2e+02 Score=25.06 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=22.6
Q ss_pred eEEEEEeeCCceEeee-eCCeEEEEeCCCCcE
Q 016367 328 SQVVCDWKNGEILLEY-ANGALVSYNPENEEL 358 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~-~~~~l~~yd~~t~~~ 358 (390)
+.-+.+..++..++.. .++.+..||+++++.
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 5666777777765555 466799999998764
No 146
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=38.40 E-value=1.9e+02 Score=24.88 Aligned_cols=95 Identities=9% Similarity=-0.026 Sum_probs=55.0
Q ss_pred EEEEEECCCceeeee-cCCCCCCCCCcceEEEE-eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCccccc
Q 016367 232 RIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVV-LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRE 309 (390)
Q Consensus 232 ~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 309 (390)
.|..+|+.+.+...+ ..+... ....+.. -+|.+.++... +..+.||-++... . . ...+..
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~----~i~~~~~~pdg~~lasg~~-dg~i~iwd~~~~~---~-~-~~~~~~-------- 211 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDV----EYSSGVLHKDSLLLALYSP-DGILDVYNLSSPD---Q-A-SSRFPV-------- 211 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSC----CCCEEEECTTSCEEEEECT-TSCEEEEESSCTT---S-C-CEECCC--------
T ss_pred cEEEEECCCCcEEEEEecCCCC----ceEEEEECCCCCEEEEEcC-CCEEEEEECCCCC---C-C-ccEEec--------
Confidence 788899887766433 222221 1222332 35676666665 7899999887421 0 0 011111
Q ss_pred CcCcchhhhhccCCCCcceEEEEEeeCCceEeeeeCCeEEEEeCCCCc
Q 016367 310 NARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYANGALVSYNPENEE 357 (390)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~~~~l~~yd~~t~~ 357 (390)
..... +.-+.+.++|..++...++.+..||+++.+
T Consensus 212 ------------~h~~~-v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 212 ------------DEEAK-IKEVKFADNGYWMVVECDQTVVCFDLRKDV 246 (343)
T ss_dssp ------------CTTSC-EEEEEECTTSSEEEEEESSBEEEEETTSST
T ss_pred ------------cCCCC-EEEEEEeCCCCEEEEEeCCeEEEEEcCCCC
Confidence 00112 666677778877776666689999998765
No 147
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=38.16 E-value=12 Score=33.82 Aligned_cols=28 Identities=11% Similarity=0.024 Sum_probs=17.6
Q ss_pred ceEEECCcEEEEEeeccCCCCCceEEEEEECCCcee
Q 016367 208 SEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF 243 (390)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~ 243 (390)
.++..+|.+|.-..++ .|.++|..+.+.
T Consensus 4 sP~v~~~~v~~gs~dg--------~v~a~d~~tG~~ 31 (369)
T 2hz6_A 4 TVTLPETLLFVSTLDG--------SLHAVSKRTGSI 31 (369)
T ss_dssp ----CTTEEEEEETTS--------EEEEEETTTCCE
T ss_pred CCeeeCCEEEEEcCCC--------EEEEEECCCCCE
Confidence 3556677888766555 899999876543
No 148
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=37.68 E-value=3.1e+02 Score=26.99 Aligned_cols=181 Identities=11% Similarity=-0.019 Sum_probs=91.0
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+.|||..|++....-.... .....+.+.|.. ++ ++ ... . .-.+.+|+..++ |..
T Consensus 76 dg~i~vw~~~~~~~~~~~~~~~----~~v~~~~~s~~~-~~-l~-~~~-~-------------dg~i~vw~~~~~--~~~ 132 (814)
T 3mkq_A 76 DFRIRVFNYNTGEKVVDFEAHP----DYIRSIAVHPTK-PY-VL-SGS-D-------------DLTVKLWNWENN--WAL 132 (814)
T ss_dssp TSEEEEEETTTCCEEEEEECCS----SCEEEEEECSSS-SE-EE-EEE-T-------------TSEEEEEEGGGT--SEE
T ss_pred CCeEEEEECCCCcEEEEEecCC----CCEEEEEEeCCC-CE-EE-EEc-C-------------CCEEEEEECCCC--ceE
Confidence 5789999998887543221111 124466677643 33 22 221 1 246888888765 222
Q ss_pred cCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCCCCCCcceEEEEe---CCeE
Q 016367 196 LGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCGSLSVCNFHLVVL---RGCL 268 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~L~~~---~G~L 268 (390)
..... .....-..+.+ +|.....+..+ ..|..+|+.+.+... +..+... ....+... +|.+
T Consensus 133 ~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~~~ 200 (814)
T 3mkq_A 133 EQTFE-GHEHFVMCVAFNPKDPSTFASGCLD-------RTVKVWSLGQSTPNFTLTTGQER----GVNYVDYYPLPDKPY 200 (814)
T ss_dssp EEEEE-CCSSCEEEEEEETTEEEEEEEEETT-------SEEEEEETTCSSCSEEEECCCTT----CCCEEEECCSTTCCE
T ss_pred EEEEc-CCCCcEEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCcceeEEecCCCC----CEEEEEEEECCCCCE
Confidence 11110 01111122333 33333333221 278889986544322 2222211 11222222 5666
Q ss_pred EEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-CCe
Q 016367 269 SAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA-NGA 347 (390)
Q Consensus 269 ~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-~~~ 347 (390)
.++... ...+.+|-++. ......+.. .. .. +..+.+.++|.+++... ++.
T Consensus 201 l~~~~~-dg~i~~~d~~~------~~~~~~~~~-------------~~--------~~-v~~~~~~~~~~~l~~~~~dg~ 251 (814)
T 3mkq_A 201 MITASD-DLTIKIWDYQT------KSCVATLEG-------------HM--------SN-VSFAVFHPTLPIIISGSEDGT 251 (814)
T ss_dssp EEEECT-TSEEEEEETTT------TEEEEEEEC-------------CS--------SC-EEEEEECSSSSEEEEEETTSC
T ss_pred EEEEeC-CCEEEEEECCC------CcEEEEEcC-------------CC--------CC-EEEEEEcCCCCEEEEEeCCCe
Confidence 665555 77899997652 223333332 11 11 55566777777666554 567
Q ss_pred EEEEeCCCCcEEE
Q 016367 348 LVSYNPENEELKD 360 (390)
Q Consensus 348 l~~yd~~t~~~~~ 360 (390)
+..||+.+++...
T Consensus 252 v~vwd~~~~~~~~ 264 (814)
T 3mkq_A 252 LKIWNSSTYKVEK 264 (814)
T ss_dssp EEEEETTTCSEEE
T ss_pred EEEEECCCCcEEE
Confidence 9999999876544
No 149
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=37.66 E-value=2.1e+02 Score=25.12 Aligned_cols=50 Identities=4% Similarity=-0.043 Sum_probs=31.4
Q ss_pred eEEEEEeeCCceEeeee-CCeEEEEeCCCCcEEEEEEeCCCCceEEEeeec
Q 016367 328 SQVVCDWKNGEILLEYA-NGALVSYNPENEELKDLVIFDPPKWFCSIVHVE 377 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~~-~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~~ 377 (390)
+.-+++.++|.++.... ++.+.+||.++++....-..+-......+.|.|
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP 322 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC
Confidence 56677888888776654 567999999988754322233333344555544
No 150
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=37.16 E-value=1.8e+02 Score=24.25 Aligned_cols=148 Identities=15% Similarity=0.058 Sum_probs=69.2
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
|.+|+|-... ...+.|||..|++...+-..... ......+.+.+.. +|-+.+ . . .-.+
T Consensus 34 S~~~~lAvg~---D~tV~iWd~~tg~~~~~~~~~~~--~~~V~~v~~~~~~-~~l~sg--s-~-------------Dg~v 91 (318)
T 4ggc_A 34 SSGNVLAVAL---DNSVYLWSASSGDILQLLQMEQP--GEYISSVAWIKEG-NYLAVG--T-S-------------SAEV 91 (318)
T ss_dssp CTTSEEEEEE---TTEEEEEETTTCCEEEEEECCST--TCCEEEEEECTTS-SEEEEE--E-T-------------TSEE
T ss_pred CCCCEEEEEe---CCEEEEEECCCCCEEEEEEecCC--CCeEEEEEECCCC-CEEEEE--E-C-------------CCcE
Confidence 4566553322 46899999999987654322111 1134467777643 443332 1 1 2468
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEE
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLV 262 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~ 262 (390)
.+++..++ .-... .. ........+..++.+-..+... ..+...+..+.......+..+... ......
T Consensus 92 ~iw~~~~~-~~~~~--~~-~h~~~~~~~~~~~~~l~s~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 158 (318)
T 4ggc_A 92 QLWDVQQQ-KRLRN--MT-SHSARVGSLSWNSYILSSGSRS-------GHIHHHDVRVAEHHVATLSGHSQE--VCGLRW 158 (318)
T ss_dssp EEEETTTT-EEEEE--EE-CCSSCEEEEEEETTEEEEEETT-------SEEEEEETTSSSCEEEEEECCSSC--EEEEEE
T ss_pred EEeecCCc-eeEEE--ec-CccceEEEeecCCCEEEEEecC-------CceEeeecCCCceeEEEEcCccCc--eEEEEE
Confidence 88888887 32111 00 0111112233334332222211 245555554443322222222110 112222
Q ss_pred EeCCeEEEEEeCCCCcEEEEEEee
Q 016367 263 VLRGCLSAVHCLDDKGMEIWIMKE 286 (390)
Q Consensus 263 ~~~G~L~~~~~~~~~~~~IW~l~~ 286 (390)
..+|.+.+.... +..+.||-+..
T Consensus 159 ~~~~~~l~s~~~-d~~i~iwd~~~ 181 (318)
T 4ggc_A 159 APDGRHLASGGN-DNLVNVWPSAP 181 (318)
T ss_dssp CTTSSEEEEEET-TSCEEEEESSC
T ss_pred cCCCCEEEEEec-CcceeEEECCC
Confidence 335666565554 77899998764
No 151
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=36.62 E-value=2e+02 Score=24.54 Aligned_cols=67 Identities=9% Similarity=0.090 Sum_probs=38.7
Q ss_pred CeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-
Q 016367 266 GCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA- 344 (390)
Q Consensus 266 G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~- 344 (390)
|.+.++... +..+.||-++... ........+.. .. .... +.-+++..++..++...
T Consensus 299 ~~~l~~~~~-dg~i~vwd~~~~~--~~~~~~~~~~~-------------~~------~~~~-v~~~~~s~~~~~l~s~~~ 355 (366)
T 3k26_A 299 QKMLALGNQ-VGKLYVWDLEVED--PHKAKCTTLTH-------------HK------CGAA-IRQTSFSRDSSILIAVCD 355 (366)
T ss_dssp SSEEEEECT-TSCEEEEECCSSS--GGGCEEEEECC-------------TT------CCSC-EEEEEECTTSSEEEEEET
T ss_pred CcEEEEEec-CCcEEEEECCCCC--CccccceEEcc-------------cc------cCCc-eEEEEeCCCCCeEEEEeC
Confidence 666665555 7789999987431 11223333332 10 0112 66677777887666554
Q ss_pred CCeEEEEeCCC
Q 016367 345 NGALVSYNPEN 355 (390)
Q Consensus 345 ~~~l~~yd~~t 355 (390)
++.+..||+.+
T Consensus 356 dg~i~iwd~~~ 366 (366)
T 3k26_A 356 DASIWRWDRLR 366 (366)
T ss_dssp TSEEEEEEC--
T ss_pred CCEEEEEEecC
Confidence 66799999864
No 152
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=36.23 E-value=2e+02 Score=24.48 Aligned_cols=70 Identities=14% Similarity=0.057 Sum_probs=39.9
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee--CCceEee
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK--NGEILLE 342 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~il~~ 342 (390)
+|++.+.... +..+.||-++. .....+..+.- . ... +.-+++.. ++.+++.
T Consensus 24 ~g~~lasgs~-D~~v~lwd~~~----~~~~~~~~l~g-------------H--------~~~-V~~v~~~~~~~~~~l~s 76 (316)
T 3bg1_A 24 YGTRLATCSS-DRSVKIFDVRN----GGQILIADLRG-------------H--------EGP-VWQVAWAHPMYGNILAS 76 (316)
T ss_dssp GGCEEEEEET-TTEEEEEEEET----TEEEEEEEEEC-------------C--------SSC-EEEEEECCGGGSSCEEE
T ss_pred CCCEEEEEeC-CCeEEEEEecC----CCcEEEEEEcC-------------C--------Ccc-EEEEEeCCCCCCCEEEE
Confidence 5666555454 78999999873 22223333321 0 111 44455543 3555555
Q ss_pred e-eCCeEEEEeCCCCcEEEE
Q 016367 343 Y-ANGALVSYNPENEELKDL 361 (390)
Q Consensus 343 ~-~~~~l~~yd~~t~~~~~v 361 (390)
. .++.+..||+++++++.+
T Consensus 77 ~s~D~~v~iWd~~~~~~~~~ 96 (316)
T 3bg1_A 77 CSYDRKVIIWREENGTWEKS 96 (316)
T ss_dssp EETTSCEEEECCSSSCCCEE
T ss_pred EECCCEEEEEECCCCcceEE
Confidence 4 466799999998765544
No 153
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=36.00 E-value=2.5e+02 Score=27.68 Aligned_cols=144 Identities=12% Similarity=0.023 Sum_probs=68.5
Q ss_pred EeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCC
Q 016367 101 VGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKS 180 (390)
Q Consensus 101 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 180 (390)
++..+|.|.+.+.. ...+.+.++.++....+-.... ....++++||..+.-.+. . . ....
T Consensus 460 vD~~~g~LY~tD~~-~~~I~v~d~dg~~~~~l~~~~~----~~P~giavDp~~g~ly~t-----d---------~-~~~~ 519 (699)
T 1n7d_A 460 VDWIHSNIYWTDSV-LGTVSVADTKGVKRKTLFREQG----SKPRAIVVDPVHGFMYWT-----D---------W-GTPA 519 (699)
T ss_dssp CCCSSSBCEECCTT-TSCEEEEBSSSCCEEEECCCSS----CCCCCEECCSSSSCCEEC-----C---------C-SSSC
T ss_pred EEeeCCcEEEEecc-CCeEEEEecCCCceEEEEeCCC----CCcceEEEccCCCcEEEc-----c---------c-CCCC
Confidence 34345555555432 4678888887765444322110 011256677654422111 1 0 1113
Q ss_pred eEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCC
Q 016367 181 DVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSV 256 (390)
Q Consensus 181 ~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~ 256 (390)
.+++++.... .-+.+.. ..+ ....++.+ +|.|||..... ..|.+||+.......+ ..+....
T Consensus 520 ~I~~~~~dG~-~~~~l~~--~~l-~~PnGlavd~~~~~LY~aD~~~-------~~I~~~d~dG~~~~~~~~~~~~~~--- 585 (699)
T 1n7d_A 520 KIKKGGLNGV-DIYSLVT--ENI-QWPNGITLDLLSGRLYWVDSKL-------HSISSIDVNGGNRKTILEDEKRLA--- 585 (699)
T ss_dssp CEEBCCSSSC-CCCEESC--SSC-SSCCCEEECTTTCCEEEEETTT-------TEEEEECSSSSCCEEECCCSSSCS---
T ss_pred eEEEEeCCCC-CeeEEEe--CCC-CCccEEEEeccCCEEEEEecCC-------CeEEEEccCCCceEEEEecCCcCC---
Confidence 4555555433 2222211 011 11345666 48899986543 4899999976544443 3222111
Q ss_pred cceEEEEeCCeEEEEEeCCCCcE
Q 016367 257 CNFHLVVLRGCLSAVHCLDDKGM 279 (390)
Q Consensus 257 ~~~~L~~~~G~L~~~~~~~~~~~ 279 (390)
...-|.+.++.|+++... ...|
T Consensus 586 ~P~glavd~~~lywtd~~-~~~V 607 (699)
T 1n7d_A 586 HPFSLAVFEDKVFWTDII-NEAI 607 (699)
T ss_dssp SCCCCEEETTEEEEECST-TTCE
T ss_pred CceEeEEECCEEEEEeCC-CCeE
Confidence 122344566777776654 4444
No 154
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=36.00 E-value=78 Score=23.08 Aligned_cols=42 Identities=7% Similarity=0.082 Sum_probs=29.5
Q ss_pred ccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEE
Q 016367 117 NPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIV 162 (390)
Q Consensus 117 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 162 (390)
-.+++.+|.|++|. |..... ....+.+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~--p~~~~~--g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWV--PAGGST--GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEE--EGGGCC--SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceE--ECCCCC--CceEEEEEEECCCCEEEEEEEE
Confidence 46889999999885 333110 1234678889888899999865
No 155
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=35.47 E-value=2.2e+02 Score=24.79 Aligned_cols=190 Identities=9% Similarity=-0.085 Sum_probs=87.8
Q ss_pred cCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEE
Q 016367 104 CNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVE 183 (390)
Q Consensus 104 ~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~ 183 (390)
.+|-.++.... ...+.|||..|++....-..+. .....+.+.+....+ ++... . .-.+.
T Consensus 137 pdg~~l~sgs~-d~~i~iwd~~~~~~~~~~~~h~----~~V~~~~~~~~~~~~-l~s~s--~-------------D~~v~ 195 (344)
T 4gqb_B 137 SSGTQAVSGSK-DICIKVWDLAQQVVLSSYRAHA----AQVTCVAASPHKDSV-FLSCS--E-------------DNRIL 195 (344)
T ss_dssp TTSSEEEEEET-TSCEEEEETTTTEEEEEECCCS----SCEEEEEECSSCTTE-EEEEE--T-------------TSCEE
T ss_pred CCCCEEEEEeC-CCeEEEEECCCCcEEEEEcCcC----CceEEEEecCCCCCc-eeeec--c-------------ccccc
Confidence 34544444332 5679999998887554222111 134456666654332 22211 1 23688
Q ss_pred EEEeCCCCcccc-cCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCCCCcc
Q 016367 184 VLTVGIDHTWRY-LGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSLSVCN 258 (390)
Q Consensus 184 vyss~~~~~W~~-~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~ 258 (390)
+++.+++ .-.. +.. .. ......++.+ ++.+...+..+ ..|-.+|+.+.+. ..+..... .-
T Consensus 196 iwd~~~~-~~~~~~~~-~~-~~~~~~~~~~~p~~~~~l~sg~~d-------g~v~~wd~~~~~~~~~~~~h~~-----~v 260 (344)
T 4gqb_B 196 LWDTRCP-KPASQIGC-SA-PGYLPTSLAWHPQQSEVFVFGDEN-------GTVSLVDTKSTSCVLSSAVHSQ-----CV 260 (344)
T ss_dssp EEETTSS-SCEEECC------CCCEEEEEECSSCTTEEEEEETT-------SEEEEEESCC--CCEEEECCSS-----CE
T ss_pred ccccccc-ceeeeeec-ce-eeccceeeeecCCCCcceEEeccC-------CcEEEEECCCCcEEEEEcCCCC-----CE
Confidence 8888887 3221 111 00 0000112322 23333222221 2788889876543 22222111 12
Q ss_pred eEEEEe-CC-eEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 259 FHLVVL-RG-CLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 259 ~~L~~~-~G-~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
..+.-. +| .+.+.... +..+.||-++. . +..+..- .... +.-+++..+
T Consensus 261 ~~v~fsp~g~~~lasgs~-D~~i~vwd~~~----~---~~~~~~~---------------------H~~~-V~~v~~sp~ 310 (344)
T 4gqb_B 261 TGLVFSPHSVPFLASLSE-DCSLAVLDSSL----S---ELFRSQA---------------------HRDF-VRDATWSPL 310 (344)
T ss_dssp EEEEECSSSSCCEEEEET-TSCEEEECTTC----C---EEEEECC---------------------CSSC-EEEEEECSS
T ss_pred EEEEEccCCCeEEEEEeC-CCeEEEEECCC----C---cEEEEcC---------------------CCCC-EEEEEEeCC
Confidence 233332 34 44444444 77899995441 1 1222111 1112 566677766
Q ss_pred Cc-eEeee-eCCeEEEEeCCCCcEE
Q 016367 337 GE-ILLEY-ANGALVSYNPENEELK 359 (390)
Q Consensus 337 g~-il~~~-~~~~l~~yd~~t~~~~ 359 (390)
|. ++... .++.+..|++.++.+.
T Consensus 311 ~~~llas~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 311 NHSLLTTVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp STTEEEEEETTSCEEEEECCC----
T ss_pred CCeEEEEEcCCCeEEEEECCCCCCC
Confidence 65 55444 4677999999887643
No 156
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=34.69 E-value=2.2e+02 Score=28.16 Aligned_cols=62 Identities=13% Similarity=0.074 Sum_probs=32.7
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCC
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLP 249 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP 249 (390)
..+++|+.... .-+.+......+.....-.+..+.+||..... ..|.++|..+.+. ..|..+
T Consensus 562 ~~I~~~d~dG~-~~~~~~~~~~~~~~P~glavd~~~lywtd~~~-------~~V~~~d~~~G~~~~~i~~~ 624 (699)
T 1n7d_A 562 HSISSIDVNGG-NRKTILEDEKRLAHPFSLAVFEDKVFWTDIIN-------EAIFSANRLTGSDVNLLAEN 624 (699)
T ss_dssp TEEEEECSSSS-CCEEECCCSSSCSSCCCCEEETTEEEEECSTT-------TCEEEEETTTEEEEECCCTT
T ss_pred CeEEEEccCCC-ceEEEEecCCcCCCceEeEEECCEEEEEeCCC-------CeEEEEEccCCCceEEeecC
Confidence 46777777644 33333221111111122234567899987543 3799999865543 444433
No 157
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=34.61 E-value=2.1e+02 Score=24.11 Aligned_cols=17 Identities=18% Similarity=0.253 Sum_probs=12.5
Q ss_pred eEEEEeCCCCcEEEEEE
Q 016367 347 ALVSYNPENEELKDLVI 363 (390)
Q Consensus 347 ~l~~yd~~t~~~~~v~~ 363 (390)
.+..||+++++...+.+
T Consensus 220 ~v~~~d~~~~~~~~~~~ 236 (337)
T 1pby_B 220 GLLTMDLETGEMAMREV 236 (337)
T ss_dssp EEEEEETTTCCEEEEEE
T ss_pred ceEEEeCCCCCceEeec
Confidence 57889999888764443
No 158
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=34.56 E-value=2.7e+02 Score=25.41 Aligned_cols=48 Identities=8% Similarity=-0.103 Sum_probs=29.6
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEe-CCe-EEEEEe
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL-RGC-LSAVHC 273 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~-~G~-L~~~~~ 273 (390)
+|.||+..... .|..||+.+.+...+..+.. .-..+... +|. |++...
T Consensus 149 ~g~Lyv~d~~~--------~I~~id~~~~~v~~~~~~~~-----~P~~ia~d~~G~~lyvad~ 198 (430)
T 3tc9_A 149 HNHLYLVGEQH--------PTRLIDFEKEYVSTVYSGLS-----KVRTICWTHEADSMIITND 198 (430)
T ss_dssp EEEEEEEEBTE--------EEEEEETTTTEEEEEECCCS-----CEEEEEECTTSSEEEEEEC
T ss_pred CCeEEEEeCCC--------cEEEEECCCCEEEEEecCCC-----CcceEEEeCCCCEEEEEeC
Confidence 37888775533 89999999988776632211 22334433 455 777655
No 159
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=34.31 E-value=2.4e+02 Score=24.81 Aligned_cols=210 Identities=12% Similarity=-0.013 Sum_probs=0.0
Q ss_pred EeecCceEEeeeccccccEEEEcCCCcceecccCc-cCCCCcceEEEEEEecCC----------------CCeEEEEEEE
Q 016367 101 VGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKA-TQHAQEELAFGFGCNSST----------------MEYKVVRIVF 163 (390)
Q Consensus 101 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~-~~~~~~~~~~~~~~d~~~----------------~~ykvv~~~~ 163 (390)
....+.+|..... ...+.+||..+++....-.. .........+.+.-+... .+-+.+....
T Consensus 189 ~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (420)
T 3vl1_A 189 IIDRGRNVLSASL--DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGH 266 (420)
T ss_dssp EETTTTEEEEEET--TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEE
T ss_pred EcCCCCEEEEEcC--CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEc
Q ss_pred eccccccccCCCCCCCCeEEEEEeCCCCcccccCCCCcccCCCCceEEECCc-EEEEEeeccCCCCCceEEEEEECCCce
Q 016367 164 NFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALLNGS-LHWVTMRYKNNPGPRLRIMSFDLAEED 242 (390)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~-lywl~~~~~~~~~~~~~il~fD~~~e~ 242 (390)
.+ -.+.+|+.+++ .-..............-...-+|. +...+..+ ..|..+|+.+.+
T Consensus 267 ~d--------------g~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~d-------g~i~vwd~~~~~ 324 (420)
T 3vl1_A 267 VS--------------GVITVHNVFSK-EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYEN-------GMLAQWDLRSPE 324 (420)
T ss_dssp TT--------------SCEEEEETTTC-CEEEEECCTTSSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTCTT
T ss_pred CC--------------CeEEEEECCCC-ceeEEcccccCCCceeEEEeCCCCCEEEEEeCC-------CeEEEEEcCCCc
Q ss_pred eeeecCCCCCCCCCcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccC
Q 016367 243 FGEIGLPDCGSLSVCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSG 322 (390)
Q Consensus 243 ~~~i~lP~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 322 (390)
-....+..+... ....+...+|.+.+.... +..+.||.+.+ ...-.....+.. ........
T Consensus 325 ~~~~~~~~~~~~--~v~~~~~~~~~~l~s~~~-d~~v~iw~~~~---~~~~~~~~~~~~-------------~~~~~~~~ 385 (420)
T 3vl1_A 325 CPVGEFLINEGT--PINNVYFAAGALFVSSGF-DTSIKLDIISD---PESERPAIEFET-------------PTFLVSND 385 (420)
T ss_dssp SCSEEEEESTTS--CEEEEEEETTEEEEEETT-TEEEEEEEECC---TTCCSCEECTTS-------------CEEECCSS
T ss_pred CchhhhhccCCC--CceEEEeCCCCEEEEecC-CccEEEEeccC---CCCCccceeccC-------------ccEEccCC
Q ss_pred CCCcceEEEEEeeCCc----eEeeeeCCeEEEEeCCCC
Q 016367 323 LGRGSSQVVCDWKNGE----ILLEYANGALVSYNPENE 356 (390)
Q Consensus 323 ~~~~~~~~~~~~~~g~----il~~~~~~~l~~yd~~t~ 356 (390)
.. ..-+++..++. ++.....+.+..|+++..
T Consensus 386 ~~---v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 386 DA---VSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP 420 (420)
T ss_dssp CC---CCEEEEECCSSSSCEEEEEETTTEEEEEESCC-
T ss_pred cc---eEEEEEccCCCCcceEEEEcCCceEEEEeccCC
No 160
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=33.92 E-value=3.4e+02 Score=26.46 Aligned_cols=80 Identities=11% Similarity=0.007 Sum_probs=40.0
Q ss_pred ceEEECCcEEEEEeeccCCCCCceEEEEEECCCc--eeeeecCCCCCCCCCcceEEEEeCCeEEE-EEeCC-CCcEEEEE
Q 016367 208 SEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEE--DFGEIGLPDCGSLSVCNFHLVVLRGCLSA-VHCLD-DKGMEIWI 283 (390)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e--~~~~i~lP~~~~~~~~~~~L~~~~G~L~~-~~~~~-~~~~~IW~ 283 (390)
..++.+|.+|.-..++ .++++|..+. .|+.-......... ....-.+.+|.+++ ....+ ...=.|+.
T Consensus 112 ~~~~~~~~v~v~~~dg--------~l~alD~~tG~~~W~~~~~~~~~~~~-~~~~P~v~~~~v~vg~~~~~~~~~g~v~a 182 (668)
T 1kv9_A 112 GVALWGDKVYVGTLDG--------RLIALDAKTGKAIWSQQTTDPAKPYS-ITGAPRVVKGKVIIGNGGAEYGVRGFVSA 182 (668)
T ss_dssp CCEEEBTEEEEECTTS--------EEEEEETTTCCEEEEEECSCTTSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEE
T ss_pred ceEEECCEEEEEcCCC--------EEEEEECCCCCEeeeeccCCCCCcce-ecCCCEEECCEEEEeCCCCCcCCCCEEEE
Confidence 3567788898766555 8999998765 44432211110000 11122345777777 32210 11234556
Q ss_pred EeeCCCCCceEEE
Q 016367 284 MKEYKVRESWSKD 296 (390)
Q Consensus 284 l~~~~~~~~W~~~ 296 (390)
++-...+..|...
T Consensus 183 ~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 183 YDADTGKLAWRFY 195 (668)
T ss_dssp EETTTCCEEEEEE
T ss_pred EECCCCcEEEEec
Confidence 6532225567643
No 161
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=33.72 E-value=2.6e+02 Score=25.06 Aligned_cols=192 Identities=8% Similarity=-0.007 Sum_probs=90.7
Q ss_pred cccEEEEcCCCcce--ecccCccCC-CCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCc
Q 016367 116 FNPIIVCNPFTGSY--LELAKATQH-AQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHT 192 (390)
Q Consensus 116 ~~~~~V~NP~T~~~--~~LP~~~~~-~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~ 192 (390)
.+.+.||+..++.. ..+.+.... ........+.++|..+.+-+.+ . . .-.+.+|+.+++..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~-~--~-------------dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSV-A--D-------------DQKLMIWDTRNNNT 266 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEE-E--T-------------TSEEEEEETTCSCS
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEE-e--C-------------CCeEEEEECCCCCC
Confidence 56788888877321 111111111 1112355677777544433332 1 1 24788999987611
Q ss_pred ccccCCCCcccCCCCceEEEC--Cc-EEEEEeeccCCCCCceEEEEEECCCce--eeeecCCCCCCCCCcceEEEEe-CC
Q 016367 193 WRYLGPVPWRLNPGASEALLN--GS-LHWVTMRYKNNPGPRLRIMSFDLAEED--FGEIGLPDCGSLSVCNFHLVVL-RG 266 (390)
Q Consensus 193 W~~~~~~p~~~~~~~~~v~~~--G~-lywl~~~~~~~~~~~~~il~fD~~~e~--~~~i~lP~~~~~~~~~~~L~~~-~G 266 (390)
.+.+..+. .....-.++.++ |. ++..+... ..|..+|+.+.. ...+..... .-..+... +|
T Consensus 267 ~~~~~~~~-~~~~~v~~i~~~p~~~~~l~tg~~d-------g~v~vwd~~~~~~~~~~~~~h~~-----~v~~i~~sp~~ 333 (430)
T 2xyi_A 267 SKPSHTVD-AHTAEVNCLSFNPYSEFILATGSAD-------KTVALWDLRNLKLKLHSFESHKD-----EIFQVQWSPHN 333 (430)
T ss_dssp SSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTCTTSCSEEEECCSS-----CEEEEEECSSC
T ss_pred CcceeEee-cCCCCeEEEEeCCCCCCEEEEEeCC-------CeEEEEeCCCCCCCeEEeecCCC-----CEEEEEECCCC
Confidence 22221110 000111233333 43 34333322 379999987632 223322111 12223322 34
Q ss_pred -eEEEEEeCCCCcEEEEEEeeCCCCCc--------eEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC
Q 016367 267 -CLSAVHCLDDKGMEIWIMKEYKVRES--------WSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG 337 (390)
Q Consensus 267 -~L~~~~~~~~~~~~IW~l~~~~~~~~--------W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (390)
.+.++... ...+.||-+...+.... -.++.... +.... ..-+.+..++
T Consensus 334 ~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~h~~~-v~~~~~~p~~ 390 (430)
T 2xyi_A 334 ETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG---------------------GHTAK-ISDFSWNPNE 390 (430)
T ss_dssp TTEEEEEET-TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC---------------------CCSSC-EEEEEECSSS
T ss_pred CCEEEEEeC-CCcEEEEeCCCCccccCccccccCCcceEEEcC---------------------CCCCC-ceEEEECCCC
Confidence 45555554 67899999875321100 01111111 11112 5556677777
Q ss_pred c-eEeeee-CCeEEEEeCCCCcEE
Q 016367 338 E-ILLEYA-NGALVSYNPENEELK 359 (390)
Q Consensus 338 ~-il~~~~-~~~l~~yd~~t~~~~ 359 (390)
. +++... ++.+..|++.++.+.
T Consensus 391 ~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 391 PWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp TTEEEEEETTSEEEEEEECHHHHC
T ss_pred CCEEEEEECCCCEEEeEccccccc
Confidence 6 555444 567899998876654
No 162
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=33.25 E-value=2.3e+02 Score=24.16 Aligned_cols=157 Identities=11% Similarity=-0.062 Sum_probs=84.3
Q ss_pred CceEEeeec-cccccEEEEcCCCcceec-ccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 105 NGLLCVSDA-LYFNPIIVCNPFTGSYLE-LAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 105 ~GLl~~~~~-~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
+|.|....+ .....+.+.++.|++... +|.... ....|+..+. + ++..... ....+
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~----~fgeGi~~~g--~--~lyv~t~--------------~~~~v 88 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS----YFGEGLTLLN--E--KLYQVVW--------------LKNIG 88 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT----CCEEEEEEET--T--EEEEEET--------------TCSEE
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC----cceEEEEEeC--C--EEEEEEe--------------cCCEE
Confidence 377666554 225789999999998543 332211 1223555552 2 3333221 13578
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCce-eeeecCCCCCCCCCcceEE
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEED-FGEIGLPDCGSLSVCNFHL 261 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~-~~~i~lP~~~~~~~~~~~L 261 (390)
.||+..+. +.+..+|.+ ....-++..+|.-.|.+... ..|..+|+.+.+ ...++.......-..--.+
T Consensus 89 ~viD~~t~---~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs-------~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nel 157 (266)
T 2iwa_A 89 FIYDRRTL---SNIKNFTHQ-MKDGWGLATDGKILYGSDGT-------SILYEIDPHTFKLIKKHNVKYNGHRVIRLNEL 157 (266)
T ss_dssp EEEETTTT---EEEEEEECC-SSSCCEEEECSSSEEEECSS-------SEEEEECTTTCCEEEEEECEETTEECCCEEEE
T ss_pred EEEECCCC---cEEEEEECC-CCCeEEEEECCCEEEEECCC-------CeEEEEECCCCcEEEEEEECCCCcccccceeE
Confidence 89998876 233333333 12234677787755555422 389999998744 4455543211000011122
Q ss_pred EEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEcc
Q 016367 262 VVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGT 301 (390)
Q Consensus 262 ~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~ 301 (390)
...+|.|++.... .. +|++.+ ...+..+.+|++
T Consensus 158 e~~dg~lyvn~~~-~~--~V~vID----~~tg~V~~~I~~ 190 (266)
T 2iwa_A 158 EYINGEVWANIWQ-TD--CIARIS----AKDGTLLGWILL 190 (266)
T ss_dssp EEETTEEEEEETT-SS--EEEEEE----TTTCCEEEEEEC
T ss_pred EEECCEEEEecCC-CC--eEEEEE----CCCCcEEEEEEC
Confidence 2237888874332 22 677777 335667788886
No 163
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=33.13 E-value=2.4e+02 Score=24.47 Aligned_cols=32 Identities=13% Similarity=0.012 Sum_probs=21.3
Q ss_pred eEEEEEeeCCceEeeee-CCeEEEEeCCCCcEE
Q 016367 328 SQVVCDWKNGEILLEYA-NGALVSYNPENEELK 359 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~~-~~~l~~yd~~t~~~~ 359 (390)
+.-+++..++..++... ++.+..||+++.+..
T Consensus 337 v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 55667777887666654 667999999987653
No 164
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=32.78 E-value=20 Score=21.43 Aligned_cols=16 Identities=38% Similarity=0.569 Sum_probs=11.5
Q ss_pred CCCcHHHHHHHHccCC
Q 016367 2 ENLPLDVALDILSRLP 17 (390)
Q Consensus 2 ~~LP~Dll~eIL~rLP 17 (390)
..||.|+..|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 3578888888887544
No 165
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=32.51 E-value=2.5e+02 Score=24.43 Aligned_cols=33 Identities=21% Similarity=0.152 Sum_probs=22.9
Q ss_pred eEEEEEeeCCceEeeee-C---CeEEEEeCCCCcEEE
Q 016367 328 SQVVCDWKNGEILLEYA-N---GALVSYNPENEELKD 360 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~~-~---~~l~~yd~~t~~~~~ 360 (390)
..-+.+..++.+++... + +.+..||+++++...
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~ 272 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG 272 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCCcccc
Confidence 55566777777666554 4 579999998876543
No 166
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=32.31 E-value=2.4e+02 Score=24.06 Aligned_cols=69 Identities=6% Similarity=-0.068 Sum_probs=41.7
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeee-
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY- 343 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~- 343 (390)
+|.+.++... ...+.+|-++.. ......+.. .. .. ..-+.+..++..++..
T Consensus 186 ~~~~l~~~~~-dg~i~i~d~~~~-----~~~~~~~~~-------------~~--------~~-v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 186 KGKYIIAGHK-DGKISKYDVSNN-----YEYVDSIDL-------------HE--------KS-ISDMQFSPDLTYFITSS 237 (369)
T ss_dssp GGCEEEEEET-TSEEEEEETTTT-----TEEEEEEEC-------------CS--------SC-EEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEcC-CCEEEEEECCCC-----cEeEEEEec-------------CC--------Cc-eeEEEECCCCCEEEEec
Confidence 4555555554 678999987631 233444443 11 11 5556677777765554
Q ss_pred eCCeEEEEeCCCCcEEEE
Q 016367 344 ANGALVSYNPENEELKDL 361 (390)
Q Consensus 344 ~~~~l~~yd~~t~~~~~v 361 (390)
.++.+..||+++++....
T Consensus 238 ~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 238 RDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp TTSEEEEEETTTCCEEEE
T ss_pred CCceEEEEECCCCceeee
Confidence 466799999998776543
No 167
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=31.82 E-value=2.3e+02 Score=23.79 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=0.0
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeC---CeEEEEEeCCCCcEEEEEEeeCC
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLR---GCLSAVHCLDDKGMEIWIMKEYK 288 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~---G~L~~~~~~~~~~~~IW~l~~~~ 288 (390)
+|..-..+..+ ..|-.+|+.+++...+ .+..+.. .-..+.-.. |.+.+.... +..+.||-++
T Consensus 20 ~g~~las~s~D-------~~v~iw~~~~~~~~~~~~l~gH~~---~V~~v~~s~~~~g~~l~s~s~-D~~v~iWd~~--- 85 (297)
T 2pm7_B 20 YGKRMATCSSD-------KTIKIFEVEGETHKLIDTLTGHEG---PVWRVDWAHPKFGTILASCSY-DGKVMIWKEE--- 85 (297)
T ss_dssp TSSEEEEEETT-------SCEEEEEBCSSCBCCCEEECCCSS---CEEEEEECCGGGCSEEEEEET-TTEEEEEEBS---
T ss_pred CCCEEEEEeCC-------CEEEEEecCCCCcEEEEEEccccC---CeEEEEecCCCcCCEEEEEcC-CCEEEEEEcC---
Q ss_pred CCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC--CceEeeee-CCeEEEEeCCCC-cEEEEEEe
Q 016367 289 VRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN--GEILLEYA-NGALVSYNPENE-ELKDLVIF 364 (390)
Q Consensus 289 ~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~il~~~~-~~~l~~yd~~t~-~~~~v~~~ 364 (390)
...|.....+.. .... +.-+.+..+ |.+++... ++.+..||++++ ......+.
T Consensus 86 -~~~~~~~~~~~~-------------h~~~---------v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 142 (297)
T 2pm7_B 86 -NGRWSQIAVHAV-------------HSAS---------VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID 142 (297)
T ss_dssp -SSCBCCCEEECC-------------CSSC---------EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE
T ss_pred -CCceEEEEEeec-------------CCCc---------eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee
Q ss_pred CCCCceEEEeeecc
Q 016367 365 DPPKWFCSIVHVES 378 (390)
Q Consensus 365 ~~~~~~~~~~y~~s 378 (390)
+.......+.+.+.
T Consensus 143 ~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 143 AHAIGVNSASWAPA 156 (297)
T ss_dssp CCSSCEEEEEECCC
T ss_pred cccCccceEeecCC
No 168
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=31.81 E-value=2.5e+02 Score=24.17 Aligned_cols=72 Identities=8% Similarity=0.012 Sum_probs=42.0
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEE-EEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeee
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSK-DYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY 343 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~ 343 (390)
+|.+.+.... +..+.||-+........... ...+.- .... +.-+++..++.+++..
T Consensus 38 d~~~l~sgs~-D~~v~iWd~~~~~~~~~~~~~~~~l~~---------------------h~~~-V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 38 DSPVLISGSR-DKTVMIWKLYEEEQNGYFGIPHKALTG---------------------HNHF-VSDLALSQENCFAISS 94 (343)
T ss_dssp CCCEEEEEET-TSCEEEEEECSSCCSSBSEEEEEEECC---------------------CSSC-EEEEEECSSTTEEEEE
T ss_pred CCCEEEEEcC-CCEEEEEECCcCCcccccccccchhcc---------------------CCCc-eEEEEECCCCCEEEEE
Confidence 5666665555 78999999874321111111 112211 1112 5556777777766655
Q ss_pred e-CCeEEEEeCCCCcEE
Q 016367 344 A-NGALVSYNPENEELK 359 (390)
Q Consensus 344 ~-~~~l~~yd~~t~~~~ 359 (390)
. ++.+..||+++++..
T Consensus 95 s~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTY 111 (343)
T ss_dssp ETTSEEEEEETTSSCEE
T ss_pred cCCCcEEEEECCCCcEE
Confidence 4 667999999988654
No 169
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=31.57 E-value=2.6e+02 Score=24.32 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=54.5
Q ss_pred EEEEEECCCcee-eeecCCCCCC--------CCCcceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEcc
Q 016367 232 RIMSFDLAEEDF-GEIGLPDCGS--------LSVCNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGT 301 (390)
Q Consensus 232 ~il~fD~~~e~~-~~i~lP~~~~--------~~~~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~ 301 (390)
.|..+|+.+.+. ..+..|.... ....-..+... +|.+.++... +..+.||-++. ...+..+..
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~------~~~~~~~~~ 331 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-DGKLRFWDVKT------KERITTLNM 331 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET-TSEEEEEETTT------TEEEEEEEC
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC-CCeEEEEEcCC------CceeEEEec
Confidence 899999976543 3344321100 00012233333 5666665555 77999998763 345555552
Q ss_pred CCCc-ccccC-cCcchhhhhccCCCCcceEEEEEeeCC----------ceEeee-eCCeEEEEeCCCCc
Q 016367 302 YLPA-SLREN-ARPHLEMLKKSGLGRGSSQVVCDWKNG----------EILLEY-ANGALVSYNPENEE 357 (390)
Q Consensus 302 ~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g----------~il~~~-~~~~l~~yd~~t~~ 357 (390)
.... +..++ ......... ..... +.-+.+.++| .+++.. .++.+..||+++++
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~--~~~~~-v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 332 HCDDIEIEEDILAVDEHGDS--LAEPG-VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CGGGCSSGGGCCCBCTTSCB--CSSCC-EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccCcccchhhhhcccccccc--ccCCc-eeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 1000 00000 000000000 00122 5666777776 455554 46779999988764
No 170
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=30.51 E-value=3.1e+02 Score=24.95 Aligned_cols=151 Identities=10% Similarity=0.039 Sum_probs=78.0
Q ss_pred EEee-cCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCC
Q 016367 100 VVGS-CNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPR 178 (390)
Q Consensus 100 ~~~s-~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~ 178 (390)
.++. .+|.|.+.+.. ..+.++++.+++...+-... ....++++|+..+ .++.... . +...
T Consensus 143 avdp~~~g~Lyv~d~~--~~I~~id~~~~~v~~~~~~~-----~~P~~ia~d~~G~--~lyvad~-~---------~~~~ 203 (430)
T 3tc9_A 143 SFDPKNHNHLYLVGEQ--HPTRLIDFEKEYVSTVYSGL-----SKVRTICWTHEAD--SMIITND-Q---------NNND 203 (430)
T ss_dssp EEETTEEEEEEEEEBT--EEEEEEETTTTEEEEEECCC-----SCEEEEEECTTSS--EEEEEEC-C---------SCTT
T ss_pred EECCCCCCeEEEEeCC--CcEEEEECCCCEEEEEecCC-----CCcceEEEeCCCC--EEEEEeC-C---------CCcc
Confidence 4454 46777776652 67888999887766553321 1345788887544 2222221 0 0011
Q ss_pred CCeEEEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceee-eecCCCCCCC
Q 016367 179 KSDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFG-EIGLPDCGSL 254 (390)
Q Consensus 179 ~~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~ 254 (390)
...+.+++ ..+ .|.....++. .. ...++.+ +|.+|+..... ..|..||+.+.... ....+...
T Consensus 204 ~~~v~~~~-~~g-~~~~~~~l~~-~~-~p~giavdp~~g~lyv~d~~~-------~~V~~~~~~~~~~~~~~~~~~~~-- 270 (430)
T 3tc9_A 204 RPNNYILT-RES-GFKVITELTK-GQ-NCNGAETHPINGELYFNSWNA-------GQVFRYDFTTQETTPLFTIQDSG-- 270 (430)
T ss_dssp SEEEEEEE-GGG-TSCSEEEEEE-CS-SCCCEEECTTTCCEEEEETTT-------TEEEEEETTTTEEEEEEECSSSS--
T ss_pred cceEEEEe-CCC-ceeeeeeecc-CC-CceEEEEeCCCCEEEEEECCC-------CEEEEEECCCCcEEEEEEcCCCC--
Confidence 12344444 344 5542211111 11 1234444 68888876542 38999999887663 33444321
Q ss_pred CCcceEEEEe-CCe-EEEEEeCCCCcEEEEEEe
Q 016367 255 SVCNFHLVVL-RGC-LSAVHCLDDKGMEIWIMK 285 (390)
Q Consensus 255 ~~~~~~L~~~-~G~-L~~~~~~~~~~~~IW~l~ 285 (390)
....++.. +|+ |+++... ...+.++..+
T Consensus 271 --~P~gia~~pdG~~lyv~d~~-~~~I~~~~~d 300 (430)
T 3tc9_A 271 --WEFHIQFHPSGNYAYIVVVN-QHYILRSDYD 300 (430)
T ss_dssp --CCEEEEECTTSSEEEEEETT-TTEEEEEEEE
T ss_pred --cceeEEEcCCCCEEEEEECC-CCEEEEEeCC
Confidence 12234443 566 7776654 5555544443
No 171
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=30.44 E-value=2.6e+02 Score=24.02 Aligned_cols=205 Identities=10% Similarity=-0.008 Sum_probs=96.9
Q ss_pred EeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCC
Q 016367 101 VGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKS 180 (390)
Q Consensus 101 ~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~ 180 (390)
.+.-+|.+.+.+.. ...++++||.+++...++... ...++.+++. +++-| . . . .
T Consensus 56 ~~~~~~~l~~~d~~-~~~i~~~d~~~~~~~~~~~~~------~v~~i~~~~d-g~l~v-~-~--~--------------~ 109 (326)
T 2ghs_A 56 FDPASGTAWWFNIL-ERELHELHLASGRKTVHALPF------MGSALAKISD-SKQLI-A-S--D--------------D 109 (326)
T ss_dssp EETTTTEEEEEEGG-GTEEEEEETTTTEEEEEECSS------CEEEEEEEET-TEEEE-E-E--T--------------T
T ss_pred EeCCCCEEEEEECC-CCEEEEEECCCCcEEEEECCC------cceEEEEeCC-CeEEE-E-E--C--------------C
Confidence 34445655555532 467999999998766543221 2345666664 33322 1 1 1 2
Q ss_pred eEEEEEeCCCCcccccCCCCcccCC-CCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 181 DVEVLTVGIDHTWRYLGPVPWRLNP-GASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 181 ~~~vyss~~~~~W~~~~~~p~~~~~-~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
.+.+|+..++ ..+.+...+..... .-..+.+ +|.+| ++............|..+| +.++..+.- ... .
T Consensus 110 gl~~~d~~~g-~~~~~~~~~~~~~~~~~~~i~~d~~G~l~-v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~---~ 180 (326)
T 2ghs_A 110 GLFLRDTATG-VLTLHAELESDLPGNRSNDGRMHPSGALW-IGTMGRKAETGAGSIYHVA--KGKVTKLFA--DIS---I 180 (326)
T ss_dssp EEEEEETTTC-CEEEEECSSTTCTTEEEEEEEECTTSCEE-EEEEETTCCTTCEEEEEEE--TTEEEEEEE--EES---S
T ss_pred CEEEEECCCC-cEEEEeeCCCCCCCCCCCCEEECCCCCEE-EEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCc---c
Confidence 4778888888 77655332211110 0112333 57764 4443211111224788888 455544321 100 1
Q ss_pred ceEEEEe-CCe-EEEEEeCCCCcEEEEEEe-eCCCCCceEEEEE-EccCCCcccccCcCcchhhhhccCCCCcceEEEEE
Q 016367 258 NFHLVVL-RGC-LSAVHCLDDKGMEIWIMK-EYKVRESWSKDYI-IGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCD 333 (390)
Q Consensus 258 ~~~L~~~-~G~-L~~~~~~~~~~~~IW~l~-~~~~~~~W~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (390)
...+... +|+ |++.... ...+.+|.++ +.+ ........ ... .. .... ..-+++
T Consensus 181 ~~~i~~s~dg~~lyv~~~~-~~~I~~~d~~~~~G--l~~~~~~~~~~~-------------~~------~~~~-p~gi~~ 237 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTK-VNRLMRVPLDARTG--LPTGKAEVFIDS-------------TG------IKGG-MDGSVC 237 (326)
T ss_dssp EEEEEECTTSCEEEEEETT-TCEEEEEEBCTTTC--CBSSCCEEEEEC-------------TT------SSSE-EEEEEE
T ss_pred cCCeEEcCCCCEEEEEECC-CCEEEEEEcccccC--CcccCceEEEEC-------------CC------CCCC-CCeeEE
Confidence 1123333 554 6665443 4455555443 111 01110001 111 00 0001 333456
Q ss_pred eeCCceEeeee-CCeEEEEeCCCCcEEEEEE
Q 016367 334 WKNGEILLEYA-NGALVSYNPENEELKDLVI 363 (390)
Q Consensus 334 ~~~g~il~~~~-~~~l~~yd~~t~~~~~v~~ 363 (390)
..+|.+++... ..++..||++.+.++.+..
T Consensus 238 d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~ 268 (326)
T 2ghs_A 238 DAEGHIWNARWGEGAVDRYDTDGNHIARYEV 268 (326)
T ss_dssp CTTSCEEEEEETTTEEEEECTTCCEEEEEEC
T ss_pred CCCCCEEEEEeCCCEEEEECCCCCEEEEEEC
Confidence 66777777654 4679999997666666644
No 172
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=30.03 E-value=4.1e+02 Score=26.11 Aligned_cols=145 Identities=14% Similarity=0.097 Sum_probs=76.6
Q ss_pred CCeEEEEEeCCCC-c-ccccCCCCcccCCCCceEEECC-cEEEEEeeccCCCCCceEEEEEECCC--ceeeeecCCCCCC
Q 016367 179 KSDVEVLTVGIDH-T-WRYLGPVPWRLNPGASEALLNG-SLHWVTMRYKNNPGPRLRIMSFDLAE--EDFGEIGLPDCGS 253 (390)
Q Consensus 179 ~~~~~vyss~~~~-~-W~~~~~~p~~~~~~~~~v~~~G-~lywl~~~~~~~~~~~~~il~fD~~~--e~~~~i~lP~~~~ 253 (390)
...+.+++..+++ . |+.+..... .....+..+| .+|+..... .....|...|+.+ +.|..+- |....
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~---~~~~~~~~dg~~l~~~s~~~----~~~~~l~~~d~~~~~~~~~~l~-~~~~~ 364 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLK---AQWDFVDGVGDQLWFVSGDG----APLKKIVRVDLSGSTPRFDTVV-PESKD 364 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSS---SCEEEEEEETTEEEEEECTT----CTTCEEEEEECSSSSCEEEEEE-CCCSS
T ss_pred cceEEEEECCCCCCcccEEecCCCC---ceEEEEeccCCEEEEEECCC----CCCCEEEEEeCCCCccccEEEe-cCCCC
Confidence 4577788876541 3 666542111 1122333344 566665432 1135799999987 5676653 33221
Q ss_pred CCCcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEE
Q 016367 254 LSVCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCD 333 (390)
Q Consensus 254 ~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (390)
....+...++.|.+.... .....||+++-.+ + ....+.. .. .. . ...+.+
T Consensus 365 ---~l~~~~~~~~~lv~~~~~-dg~~~l~~~~~~g-~----~~~~l~~-------------~~------~~-~-v~~~~~ 414 (741)
T 1yr2_A 365 ---NLESVGIAGNRLFASYIH-DAKSQVLAFDLDG-K----PAGAVSL-------------PG------IG-S-ASGLSG 414 (741)
T ss_dssp ---EEEEEEEEBTEEEEEEEE-TTEEEEEEEETTS-C----EEEECBC-------------SS------SC-E-EEEEEC
T ss_pred ---eEEEEEEECCEEEEEEEE-CCEEEEEEEeCCC-C----ceeeccC-------------CC------Ce-E-EEEeec
Confidence 122334458888886555 6678899887322 1 3334443 11 01 1 333344
Q ss_pred eeCCc-eEeeee----CCeEEEEeCCCCcEEEE
Q 016367 334 WKNGE-ILLEYA----NGALVSYNPENEELKDL 361 (390)
Q Consensus 334 ~~~g~-il~~~~----~~~l~~yd~~t~~~~~v 361 (390)
..+++ +++... ...++.||+.+++.+.+
T Consensus 415 s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 415 RPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp CBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred CCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 44554 555443 24689999988775443
No 173
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=29.99 E-value=3.7e+02 Score=25.66 Aligned_cols=196 Identities=10% Similarity=-0.072 Sum_probs=97.0
Q ss_pred ceEEeeeccccccEEEEcCCCccee-cccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEE
Q 016367 106 GLLCVSDALYFNPIIVCNPFTGSYL-ELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEV 184 (390)
Q Consensus 106 GLl~~~~~~~~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~v 184 (390)
+++.+... ....+.|+|+.|++.. .+|... ...++.++|.. +|-.+. . . .-.+.+
T Consensus 167 ~~~~V~~~-~~~~V~viD~~t~~v~~~i~~g~------~p~~v~~SpDG-r~lyv~-~--~-------------dg~V~v 222 (567)
T 1qks_A 167 NLFSVTLR-DAGQIALIDGSTYEIKTVLDTGY------AVHISRLSASG-RYLFVI-G--R-------------DGKVNM 222 (567)
T ss_dssp GEEEEEET-TTTEEEEEETTTCCEEEEEECSS------CEEEEEECTTS-CEEEEE-E--T-------------TSEEEE
T ss_pred ceEEEEeC-CCCeEEEEECCCCeEEEEEeCCC------CccceEECCCC-CEEEEE-c--C-------------CCeEEE
Confidence 44444443 2578999999998755 344321 12366777743 443332 1 1 136888
Q ss_pred EEeCCCCcccccCCCCcccCCCCceEEE------CCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCC---
Q 016367 185 LTVGIDHTWRYLGPVPWRLNPGASEALL------NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSL--- 254 (390)
Q Consensus 185 yss~~~~~W~~~~~~p~~~~~~~~~v~~------~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~--- 254 (390)
|+..+. +-+.+..++.+... .++.+ +|..-+..... ...+.+||..+.+. ..++......+
T Consensus 223 iD~~~~-t~~~v~~i~~G~~P--~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~ 293 (567)
T 1qks_A 223 IDLWMK-EPTTVAEIKIGSEA--RSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLEPKKIQSTRGMTYDEQE 293 (567)
T ss_dssp EETTSS-SCCEEEEEECCSEE--EEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCCEEEEEECCEECTTTCC
T ss_pred EECCCC-CCcEeEEEecCCCC--ceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCcEEEEEecccccccccc
Confidence 888522 22233222222111 22322 67654444433 13788999877544 33454321110
Q ss_pred ---CCcceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEE
Q 016367 255 ---SVCNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQV 330 (390)
Q Consensus 255 ---~~~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (390)
......+... ++...++...+.. .||+.+-. .....++..|+. +.+ .+.
T Consensus 294 ~~p~~rva~i~~s~~~~~~vv~~~~~g--~v~~vd~~--~~~~~~v~~i~~----------------------~~~-~~d 346 (567)
T 1qks_A 294 YHPEPRVAAILASHYRPEFIVNVKETG--KILLVDYT--DLNNLKTTEISA----------------------ERF-LHD 346 (567)
T ss_dssp EESCCCEEEEEECSSSSEEEEEETTTT--EEEEEETT--CSSEEEEEEEEC----------------------CSS-EEE
T ss_pred ccCCCceEEEEEcCCCCEEEEEecCCC--eEEEEecC--CCccceeeeeec----------------------ccc-ccC
Confidence 0011222222 2333332222133 45555421 223344444443 112 555
Q ss_pred EEEeeCCceEeee--eCCeEEEEeCCCCcEEEE
Q 016367 331 VCDWKNGEILLEY--ANGALVSYNPENEELKDL 361 (390)
Q Consensus 331 ~~~~~~g~il~~~--~~~~l~~yd~~t~~~~~v 361 (390)
.++..+|+.++.. ..+++..+|.+++++...
T Consensus 347 ~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 347 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred ceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE
Confidence 6777788755543 356799999999987654
No 174
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=29.98 E-value=3.1e+02 Score=24.70 Aligned_cols=195 Identities=8% Similarity=-0.037 Sum_probs=93.2
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+++++..+++....+.............+.+.|..+.-+.+.... . ...+.+|+..++ .-..
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~-------------d~~i~vwd~~~~-~~~~ 234 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD-R-------------DEHIKISHYPQC-FIVD 234 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE-T-------------TSCEEEEEESCT-TCEE
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc-C-------------CCcEEEEECCCC-ceee
Confidence 456788877666544211100000011344667777511122222222 1 246888998887 4321
Q ss_pred cCCCCcccCCCCceEEE-CCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCC--------------------C
Q 016367 196 LGPVPWRLNPGASEALL-NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCG--------------------S 253 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~--------------------~ 253 (390)
. ........-.++.+ +|.+...+..+ ..|..+|+.+.+. ..+..+... .
T Consensus 235 ~--~~~~h~~~v~~~~~sd~~~l~s~~~d-------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (450)
T 2vdu_B 235 K--WLFGHKHFVSSICCGKDYLLLSAGGD-------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDI 305 (450)
T ss_dssp E--ECCCCSSCEEEEEECSTTEEEEEESS-------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------C
T ss_pred e--eecCCCCceEEEEECCCCEEEEEeCC-------CeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccccc
Confidence 1 00011111122333 66654444332 3899999987653 333322100 0
Q ss_pred CCCcceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEE
Q 016367 254 LSVCNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVC 332 (390)
Q Consensus 254 ~~~~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (390)
.......+... +|...++.......+.||.+.+.. ...+..+..+.. .. . ..-++
T Consensus 306 ~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~-~~~l~~~~~~~~-------------~~---------~-v~~~~ 361 (450)
T 2vdu_B 306 IEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQ-KGDLALKQIITF-------------PY---------N-VISLS 361 (450)
T ss_dssp BCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSS-TTCEEEEEEEEC-------------SS---------C-EEEEE
T ss_pred ceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCC-CCceeeccEecc-------------CC---------c-eEEEE
Confidence 00011222222 466655444227899999993211 335666666665 11 1 44455
Q ss_pred EeeCCceEeeeeCC----------eEEEEeCCCCcEE
Q 016367 333 DWKNGEILLEYANG----------ALVSYNPENEELK 359 (390)
Q Consensus 333 ~~~~g~il~~~~~~----------~l~~yd~~t~~~~ 359 (390)
+.+ +.+++..... .++.++.++++++
T Consensus 362 ~~~-~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~ 397 (450)
T 2vdu_B 362 AHN-DEFQVTLDNKESSGVQKNFAKFIEYNLNENSFV 397 (450)
T ss_dssp EET-TEEEEEECCTTCCSSCCCSEEEEEEETTTTEEE
T ss_pred ecC-CcEEEEEecccCCCCCCcceEEEEEEcCCCeEE
Confidence 655 3455554321 6888888888875
No 175
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=29.29 E-value=2.5e+02 Score=23.48 Aligned_cols=178 Identities=13% Similarity=0.047 Sum_probs=91.7
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
...+.+||..+++........... .....+.+.+. +++-++. . . .-.+.+|+.+++ ....
T Consensus 118 d~~i~~~d~~~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~l~~~--~-~-------------dg~v~~~d~~~~-~~~~ 177 (337)
T 1gxr_A 118 ASTLSIWDLAAPTPRIKAELTSSA--PACYALAISPD-SKVCFSC--C-S-------------DGNIAVWDLHNQ-TLVR 177 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECSS--SCEEEEEECTT-SSEEEEE--E-T-------------TSCEEEEETTTT-EEEE
T ss_pred CCcEEEEECCCCCcceeeecccCC--CceEEEEECCC-CCEEEEE--e-C-------------CCcEEEEeCCCC-ceee
Confidence 467999999887643322221111 12446667763 2332222 1 1 235888998887 4322
Q ss_pred -cCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeee-ecCCCCCCCCCcceEEEE-eCCeEEE
Q 016367 196 -LGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGE-IGLPDCGSLSVCNFHLVV-LRGCLSA 270 (390)
Q Consensus 196 -~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~L~~-~~G~L~~ 270 (390)
+.. ....-..+.+ +|.....+... ..|..+|+.+.+... +..+.. ...+.. -+|.+.+
T Consensus 178 ~~~~----~~~~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~------v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 178 QFQG----HTDGASCIDISNDGTKLWTGGLD-------NTVRSWDLREGRQLQQHDFTSQ------IFSLGYCPTGEWLA 240 (337)
T ss_dssp EECC----CSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECSSC------EEEEEECTTSSEEE
T ss_pred eeec----ccCceEEEEECCCCCEEEEEecC-------CcEEEEECCCCceEeeecCCCc------eEEEEECCCCCEEE
Confidence 111 0001112333 45444443322 379999998765433 332221 122332 3566655
Q ss_pred EEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeee-eCCeEE
Q 016367 271 VHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY-ANGALV 349 (390)
Q Consensus 271 ~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~-~~~~l~ 349 (390)
+... ...+.+|-++... . ..+.. . ... ..-+.+..++..++.. .++.+.
T Consensus 241 ~~~~-~~~i~~~~~~~~~------~-~~~~~-------------~--------~~~-v~~~~~~~~~~~l~~~~~dg~i~ 290 (337)
T 1gxr_A 241 VGME-SSNVEVLHVNKPD------K-YQLHL-------------H--------ESC-VLSLKFAYCGKWFVSTGKDNLLN 290 (337)
T ss_dssp EEET-TSCEEEEETTSSC------E-EEECC-------------C--------SSC-EEEEEECTTSSEEEEEETTSEEE
T ss_pred EEcC-CCcEEEEECCCCC------e-EEEcC-------------C--------ccc-eeEEEECCCCCEEEEecCCCcEE
Confidence 5555 6789999887421 1 12221 0 111 5556677777765555 466799
Q ss_pred EEeCCCCcEEE
Q 016367 350 SYNPENEELKD 360 (390)
Q Consensus 350 ~yd~~t~~~~~ 360 (390)
.||+++++...
T Consensus 291 ~~~~~~~~~~~ 301 (337)
T 1gxr_A 291 AWRTPYGASIF 301 (337)
T ss_dssp EEETTTCCEEE
T ss_pred EEECCCCeEEE
Confidence 99999987663
No 176
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=29.12 E-value=2.4e+02 Score=23.21 Aligned_cols=196 Identities=13% Similarity=0.108 Sum_probs=98.1
Q ss_pred EEeecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCC
Q 016367 100 VVGSCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRK 179 (390)
Q Consensus 100 ~~~s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 179 (390)
+.-..+|-+.+.... ...+.++||. ++...++.+.. .....++..|+.. ..-+. . . ..
T Consensus 25 i~~d~~g~l~v~~~~-~~~v~~~~~~-~~~~~~~~~~~---~~~~~~i~~~~~g-~l~v~--~--~------------~~ 82 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHK-ANKISSLDQS-GRIKEFEVPTP---DAKVMCLIVSSLG-DIWFT--E--N------------GA 82 (300)
T ss_dssp EEECTTSCEEEEETT-TTEEEEECTT-SCEEEEECSST---TCCEEEEEECTTS-CEEEE--E--T------------TT
T ss_pred eeECCCCCEEEEcCC-CCeEEEECCC-CceEEEECCCC---CCcceeEEECCCC-CEEEE--e--c------------CC
Confidence 444456766555431 4678999998 76665443211 1134467777543 22221 1 1 12
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCCCceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPGASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
..+..|+.. + .++.... +... ....++.+ +|.+|+..... ..|..||.. .++..+.+|.... .
T Consensus 83 ~~v~~~d~~-g-~~~~~~~-~~~~-~~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~~-g~~~~~~~~~~~~---~ 147 (300)
T 2qc5_A 83 NKIGKLSKK-G-GFTEYPL-PQPD-SGPYGITEGLNGDIWFTQLNG-------DRIGKLTAD-GTIYEYDLPNKGS---Y 147 (300)
T ss_dssp TEEEEECTT-S-CEEEEEC-SSTT-CCEEEEEECSTTCEEEEETTT-------TEEEEECTT-SCEEEEECSSTTC---C
T ss_pred CeEEEECCC-C-CeEEecC-CCCC-CCCccceECCCCCEEEEccCC-------CeEEEECCC-CCEEEccCCCCCC---C
Confidence 357777776 6 6554321 1111 11223444 57766544321 279999998 6666665553221 2
Q ss_pred ceEEEE-eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 258 NFHLVV-LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 258 ~~~L~~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
...+.. .+|+|++.... ... |++++.. ..... ..++. . ... ..-+++..+
T Consensus 148 ~~~i~~d~~g~l~v~~~~-~~~--i~~~~~~---g~~~~-~~~~~--------------~-------~~~-~~~i~~d~~ 198 (300)
T 2qc5_A 148 PAFITLGSDNALWFTENQ-NNS--IGRITNT---GKLEE-YPLPT--------------N-------AAA-PVGITSGND 198 (300)
T ss_dssp EEEEEECTTSSEEEEETT-TTE--EEEECTT---CCEEE-EECSS--------------T-------TCC-EEEEEECTT
T ss_pred ceeEEECCCCCEEEEecC-CCe--EEEECCC---CcEEE-eeCCC--------------C-------CCC-cceEEECCC
Confidence 233433 35777775543 333 4444422 12222 11111 0 011 334456666
Q ss_pred CceEeeee-CCeEEEEeCCCCcEEEEE
Q 016367 337 GEILLEYA-NGALVSYNPENEELKDLV 362 (390)
Q Consensus 337 g~il~~~~-~~~l~~yd~~t~~~~~v~ 362 (390)
|.+++... ...+..||+ ++++..+.
T Consensus 199 g~l~v~~~~~~~i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 199 GALWFVEIMGNKIGRITT-TGEISEYD 224 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEE
T ss_pred CCEEEEccCCCEEEEEcC-CCcEEEEE
Confidence 77777654 446899998 56665553
No 177
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=29.04 E-value=2.7e+02 Score=23.66 Aligned_cols=195 Identities=11% Similarity=-0.008 Sum_probs=91.8
Q ss_pred CceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEE
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEV 184 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~v 184 (390)
+|-|.+.+.. ..+++.+||.++....++.. ....++++++.. +..| . .. . .....+..
T Consensus 42 ~g~lyv~d~~-~~~I~~~d~~g~~~~~~~~~------~~p~gia~~~dG-~l~v-a-d~-~-----------~~~~~v~~ 99 (306)
T 2p4o_A 42 DGTIFVTNHE-VGEIVSITPDGNQQIHATVE------GKVSGLAFTSNG-DLVA-T-GW-N-----------ADSIPVVS 99 (306)
T ss_dssp TSCEEEEETT-TTEEEEECTTCCEEEEEECS------SEEEEEEECTTS-CEEE-E-EE-C-----------TTSCEEEE
T ss_pred CCCEEEEeCC-CCeEEEECCCCceEEEEeCC------CCceeEEEcCCC-cEEE-E-ec-c-----------CCcceEEE
Confidence 6666666532 46789999987654433322 124577888754 3322 2 11 1 11234667
Q ss_pred EEeCCCCcccccCCCCcccCCCCceE--EECCcEEEEEeeccCCCCCceEEEEEECCCceeeee--c------CCCCCCC
Q 016367 185 LTVGIDHTWRYLGPVPWRLNPGASEA--LLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI--G------LPDCGSL 254 (390)
Q Consensus 185 yss~~~~~W~~~~~~p~~~~~~~~~v--~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i--~------lP~~~~~ 254 (390)
|+..++ ..+.+...+... ...++ ..+|.+|.... . ...|..+|..+.+.... . .+.....
T Consensus 100 ~d~~~g-~~~~~~~~~~~~--~~~g~~~~~~~~~~v~d~-~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 100 LVKSDG-TVETLLTLPDAI--FLNGITPLSDTQYLTADS-Y------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp EECTTS-CEEEEEECTTCS--CEEEEEESSSSEEEEEET-T------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred EcCCCC-eEEEEEeCCCcc--ccCcccccCCCcEEEEEC-C------CCeEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 777788 665544332111 11122 22344554322 1 13889999876432221 0 1111000
Q ss_pred CCcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEe
Q 016367 255 SVCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDW 334 (390)
Q Consensus 255 ~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (390)
...-+...++.|++.... ...+.++-++..+ .......+.. .. . ..-+++.
T Consensus 170 --~pngis~dg~~lyv~d~~-~~~I~~~~~~~~g---~~~~~~~~~~-------------~~---------~-P~gi~vd 220 (306)
T 2p4o_A 170 --AANGLKRFGNFLYVSNTE-KMLLLRIPVDSTD---KPGEPEIFVE-------------QT---------N-IDDFAFD 220 (306)
T ss_dssp --SEEEEEEETTEEEEEETT-TTEEEEEEBCTTS---CBCCCEEEEE-------------SC---------C-CSSEEEB
T ss_pred --cCCCcCcCCCEEEEEeCC-CCEEEEEEeCCCC---CCCccEEEec-------------cC---------C-CCCeEEC
Confidence 111233334467776655 5555554444211 1111111110 00 0 2224677
Q ss_pred eCCceEeeee-CCeEEEEeCCCCcEEEE
Q 016367 335 KNGEILLEYA-NGALVSYNPENEELKDL 361 (390)
Q Consensus 335 ~~g~il~~~~-~~~l~~yd~~t~~~~~v 361 (390)
.+|.+++... ...+..||++ +++..+
T Consensus 221 ~dG~l~va~~~~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 221 VEGNLYGATHIYNSVVRIAPD-RSTTII 247 (306)
T ss_dssp TTCCEEEECBTTCCEEEECTT-CCEEEE
T ss_pred CCCCEEEEeCCCCeEEEECCC-CCEEEE
Confidence 7787766654 4569999987 555443
No 178
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=28.91 E-value=5.2e+02 Score=27.03 Aligned_cols=206 Identities=12% Similarity=0.045 Sum_probs=98.8
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceec-ccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCe
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLE-LAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSD 181 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 181 (390)
+.+|-.++.... .+.+.|||..|++... +... ......+.+.|.. +|-+.+ . . ...
T Consensus 624 s~~~~~l~s~~~-d~~i~vw~~~~~~~~~~~~~h-----~~~v~~~~~s~~~-~~l~s~--~-~-------------d~~ 680 (1249)
T 3sfz_A 624 SQDGQRIASCGA-DKTLQVFKAETGEKLLDIKAH-----EDEVLCCAFSSDD-SYIATC--S-A-------------DKK 680 (1249)
T ss_dssp CTTSSEEEEEET-TSCEEEEETTTCCEEEEECCC-----SSCEEEEEECTTS-SEEEEE--E-T-------------TSE
T ss_pred CCCCCEEEEEeC-CCeEEEEECCCCCEEEEeccC-----CCCEEEEEEecCC-CEEEEE--e-C-------------CCe
Confidence 335544444331 5789999999987543 2211 1134567777743 343332 1 1 246
Q ss_pred EEEEEeCCCCcccccCCCCcccCCCCceEEE----CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCc
Q 016367 182 VEVLTVGIDHTWRYLGPVPWRLNPGASEALL----NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVC 257 (390)
Q Consensus 182 ~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~----~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~ 257 (390)
+.+++..++ .-... .. .....-.++.+ ++.+...+..+ ..|..+|+.+.+....-. .+.. .
T Consensus 681 v~vwd~~~~-~~~~~--~~-~~~~~v~~~~~~~~~~~~~l~sg~~d-------~~v~vwd~~~~~~~~~~~-~h~~---~ 745 (1249)
T 3sfz_A 681 VKIWDSATG-KLVHT--YD-EHSEQVNCCHFTNKSNHLLLATGSND-------FFLKLWDLNQKECRNTMF-GHTN---S 745 (1249)
T ss_dssp EEEEETTTC-CEEEE--EE-CCSSCEEEEEECSSSSCCEEEEEETT-------SCEEEEETTSSSEEEEEC-CCSS---C
T ss_pred EEEEECCCC-ceEEE--Ec-CCCCcEEEEEEecCCCceEEEEEeCC-------CeEEEEECCCcchhheec-CCCC---C
Confidence 889998887 32211 00 00000112222 12121111111 268888988765433211 1111 1
Q ss_pred ceEEEE-eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeC
Q 016367 258 NFHLVV-LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKN 336 (390)
Q Consensus 258 ~~~L~~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (390)
-..+.. -+|...++... +..+.+|-+... .....+... +. ......... ..... ...+++..+
T Consensus 746 v~~~~~sp~~~~l~s~s~-dg~v~vwd~~~~------~~~~~~~~~--~~----~~~~~~~~~--~~~~~-v~~~~~s~d 809 (1249)
T 3sfz_A 746 VNHCRFSPDDELLASCSA-DGTLRLWDVRSA------NERKSINVK--RF----FLSSEDPPE--DVEVI-VKCCSWSAD 809 (1249)
T ss_dssp EEEEEECSSTTEEEEEES-SSEEEEEEGGGT------EEEEEEECC--CC----C----------CCCCC-BCCCCBCTT
T ss_pred EEEEEEecCCCEEEEEEC-CCeEEEEeCCCC------cccceeccc--cc----ccccCCccc--cccce-EEEEEECCC
Confidence 122222 25666665554 778999988742 122233220 00 000000000 01111 333456677
Q ss_pred CceEeeeeCCeEEEEeCCCCcEEEEE
Q 016367 337 GEILLEYANGALVSYNPENEELKDLV 362 (390)
Q Consensus 337 g~il~~~~~~~l~~yd~~t~~~~~v~ 362 (390)
|..++...++.+..||..++......
T Consensus 810 g~~l~~~~~~~v~~~d~~~~~~~~~~ 835 (1249)
T 3sfz_A 810 GDKIIVAAKNKVLLFDIHTSGLLAEI 835 (1249)
T ss_dssp SSEEEEEETTEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCcEEEEEecCCCceeEE
Confidence 88777777788999999988765543
No 179
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=28.71 E-value=4.4e+02 Score=26.10 Aligned_cols=34 Identities=18% Similarity=0.370 Sum_probs=25.3
Q ss_pred eEEEEEeeCCceEeeeeCCeEEEEeCCCCcEEEE
Q 016367 328 SQVVCDWKNGEILLEYANGALVSYNPENEELKDL 361 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~~~~~l~~yd~~t~~~~~v 361 (390)
+..++..++|.|.+-..+.++..||.++++++.+
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSY 392 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEE
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEE
Confidence 4445555667777766666799999999988776
No 180
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.34 E-value=48 Score=22.14 Aligned_cols=20 Identities=15% Similarity=0.199 Sum_probs=15.1
Q ss_pred eEeeeeCCeEEEEeCCCCcE
Q 016367 339 ILLEYANGALVSYNPENEEL 358 (390)
Q Consensus 339 il~~~~~~~l~~yd~~t~~~ 358 (390)
.+....++++|+||..|++-
T Consensus 23 ~~v~T~dGR~fyyN~~Tk~S 42 (73)
T 2dk7_A 23 CVVWTGDERVFFYNPTTRLS 42 (73)
T ss_dssp EEEEESSSCEEEEETTTTEE
T ss_pred EEEECCCCCEEEecCcccce
Confidence 34455677899999999863
No 181
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=27.37 E-value=4.3e+02 Score=25.50 Aligned_cols=120 Identities=9% Similarity=0.044 Sum_probs=0.0
Q ss_pred CceEEECCcEEEEEe-eccCCCCCceEEEEEEC--CCceeeeecCCCC------CCCCCcceEEEE--eCCe----EEEE
Q 016367 207 ASEALLNGSLHWVTM-RYKNNPGPRLRIMSFDL--AEEDFGEIGLPDC------GSLSVCNFHLVV--LRGC----LSAV 271 (390)
Q Consensus 207 ~~~v~~~G~lywl~~-~~~~~~~~~~~il~fD~--~~e~~~~i~lP~~------~~~~~~~~~L~~--~~G~----L~~~ 271 (390)
..+++.+|.+|.... .. .+.++|. ..++.-..+++.. ...+....-++. .+|+ |++.
T Consensus 56 ~tP~v~~g~vyv~~~~~~--------~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~ 127 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFPN--------NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT 127 (599)
T ss_dssp SCCEEETTEEEEECSTTT--------CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE
T ss_pred eccEEECCEEEEEeCCCC--------EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEE
Q ss_pred EeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee------C
Q 016367 272 HCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA------N 345 (390)
Q Consensus 272 ~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~------~ 345 (390)
..+ . .|..|+-...+..|.....-.. .... ...--+..++.|++-.. +
T Consensus 128 t~d-g---~l~AlDa~TG~~~W~~~~~~~~-------------~~~~---------~~ssP~v~~g~V~vg~~g~e~g~~ 181 (599)
T 1w6s_A 128 QLD-G---NVAALNAETGETVWKVENSDIK-------------VGST---------LTIAPYVVKDKVIIGSSGAELGVR 181 (599)
T ss_dssp CTT-S---EEEEEETTTCCEEEEEECCCGG-------------GTCB---------CCSCCEEETTEEEECCBCGGGTCC
T ss_pred cCC-C---EEEEEECCCCCEEEeecCCCCC-------------ccce---------eecCCEEECCEEEEEecccccCCC
Q ss_pred CeEEEEeCCCCcEEE
Q 016367 346 GALVSYNPENEELKD 360 (390)
Q Consensus 346 ~~l~~yd~~t~~~~~ 360 (390)
..++.||.+|++...
T Consensus 182 g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 182 GYLTAYDVKTGEQVW 196 (599)
T ss_dssp CEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEEE
No 182
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=27.16 E-value=2.3e+02 Score=24.53 Aligned_cols=74 Identities=14% Similarity=0.004 Sum_probs=38.9
Q ss_pred ceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCce-eeeecCCCCCCCC-CcceEEEEe--CCeEEEEEe---CCCCc
Q 016367 208 SEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEED-FGEIGLPDCGSLS-VCNFHLVVL--RGCLSAVHC---LDDKG 278 (390)
Q Consensus 208 ~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~-~~~i~lP~~~~~~-~~~~~L~~~--~G~L~~~~~---~~~~~ 278 (390)
.++.+ +|.|||....... .....|+.||+.+.+ ...+.+|...... .....+.+. +|.+++... . ...
T Consensus 70 ~gv~~d~~g~L~v~D~g~~~--~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~-~~~ 146 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGNQS--KSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD-KAA 146 (343)
T ss_dssp EEEEECSSSEEEEEECHHHH--TSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG-GCE
T ss_pred eEEEEcCCCcEEEEcCCCCc--CCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC-CCe
Confidence 35555 4788887643000 001389999998877 5566776432111 122344444 466766544 2 344
Q ss_pred EEEEEE
Q 016367 279 MEIWIM 284 (390)
Q Consensus 279 ~~IW~l 284 (390)
+.+|-+
T Consensus 147 i~v~d~ 152 (343)
T 2qe8_A 147 LIRVDL 152 (343)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 544443
No 183
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=27.10 E-value=2.9e+02 Score=23.45 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=20.6
Q ss_pred eEEEEEeeCCceEeee-eCCeEEEEeCCCC
Q 016367 328 SQVVCDWKNGEILLEY-ANGALVSYNPENE 356 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~-~~~~l~~yd~~t~ 356 (390)
...+++..++..++.. .++.+..||++++
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 207 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNN 207 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTT
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 5666677777655554 4677999999983
No 184
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=27.03 E-value=2.6e+02 Score=22.95 Aligned_cols=60 Identities=10% Similarity=-0.043 Sum_probs=33.2
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEEEEe--CCeEEEEEeCCCCcEEEEEE
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHLVVL--RGCLSAVHCLDDKGMEIWIM 284 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L~~~--~G~L~~~~~~~~~~~~IW~l 284 (390)
+|.+||..... ..|..+|+.+.....+. +.... .-..++.. +|.|+++... ...+.+..+
T Consensus 47 ~~~ly~~d~~~-------~~I~~~~~~g~~~~~~~-~~~~~---~p~~ia~d~~~~~lyv~d~~-~~~I~~~~~ 108 (267)
T 1npe_A 47 DKVVYWTDISE-------PSIGRASLHGGEPTTII-RQDLG---SPEGIALDHLGRTIFWTDSQ-LDRIEVAKM 108 (267)
T ss_dssp TTEEEEEETTT-------TEEEEEESSSCCCEEEE-CTTCC---CEEEEEEETTTTEEEEEETT-TTEEEEEET
T ss_pred CCEEEEEECCC-------CEEEEEecCCCCcEEEE-ECCCC---CccEEEEEecCCeEEEEECC-CCEEEEEEc
Confidence 57899976542 38999999876543331 11111 12234443 5678886654 445544433
No 185
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=27.01 E-value=2.8e+02 Score=23.29 Aligned_cols=30 Identities=7% Similarity=0.020 Sum_probs=21.4
Q ss_pred eEEEEEeeCCceEeeee-CCeEEEEeCCCCc
Q 016367 328 SQVVCDWKNGEILLEYA-NGALVSYNPENEE 357 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~~-~~~l~~yd~~t~~ 357 (390)
+.-+++..+|+.++... ++.+..||++|++
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 56677788888776654 5679999998874
No 186
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=26.79 E-value=2e+02 Score=24.28 Aligned_cols=23 Identities=22% Similarity=0.153 Sum_probs=11.9
Q ss_pred EEeeCCceEeeeeCCeEEEEeCC
Q 016367 332 CDWKNGEILLEYANGALVSYNPE 354 (390)
Q Consensus 332 ~~~~~g~il~~~~~~~l~~yd~~ 354 (390)
....+|.|++-..++.+.....+
T Consensus 301 ~~d~~g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 301 VIDENGTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp EECTTCCEEEECTTSCEEEEEC-
T ss_pred EEcCCCEEEEEcCCCeEEEEecc
Confidence 34456667666655544444443
No 187
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=26.75 E-value=2.8e+02 Score=23.20 Aligned_cols=50 Identities=14% Similarity=0.122 Sum_probs=26.8
Q ss_pred EEEEEECCCceee-eecCCCCCCCCCcceEEEE-eCC-eEEEEEeCCCCcEEEEEEe
Q 016367 232 RIMSFDLAEEDFG-EIGLPDCGSLSVCNFHLVV-LRG-CLSAVHCLDDKGMEIWIMK 285 (390)
Q Consensus 232 ~il~fD~~~e~~~-~i~lP~~~~~~~~~~~L~~-~~G-~L~~~~~~~~~~~~IW~l~ 285 (390)
.|..+|+.+.+.. .+.++..... ...+.. -+| .|++.... ...+.+|-++
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~~-~~~v~~~d~~ 64 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPT---PMVPMVAPGGRIAYATVNK-SESLVKIDLV 64 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTC---CCCEEECTTSSEEEEEETT-TTEEEEEETT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCC---ccceEEcCCCCEEEEEeCC-CCeEEEEECC
Confidence 7888999876553 4565542100 112222 255 45555444 5677777654
No 188
>1ugj_A Riken cDNA 2310057J16 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.41.1.3
Probab=26.48 E-value=1.5e+02 Score=22.60 Aligned_cols=77 Identities=14% Similarity=0.103 Sum_probs=50.3
Q ss_pred ceEEeeecc-ccccEEEEcCCCcceecccCc--cCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 106 GLLCVSDAL-YFNPIIVCNPFTGSYLELAKA--TQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 106 GLl~~~~~~-~~~~~~V~NP~T~~~~~LP~~--~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
=||++.+.. .-+.+|.+||-+.+...|=.. ...........+-||....+|+.+-- + .....+
T Consensus 56 FlILfrd~~~qfRalY~~~~~~e~~~Ki~G~GP~~i~~~mV~~~~KYdSg~K~F~~i~s---k-----------~~s~tv 121 (141)
T 1ugj_A 56 FLILFRDSSCQFRALYTLSGETEELSRLAGYGPRTVTPAMVEGIYKYNSDRKRFTQIPA---K-----------TMSMSV 121 (141)
T ss_dssp EEEEESSSSCSEEEEEEECTTSSCEEEEESSSCSEECTTTEEEEEEEETTTTEEEECSS---S-----------SCCTTC
T ss_pred EEEEEecCCCceEEEEEEeCCCceEEEEECCCcCcccHHHHHHHhccCCCCceecccCc---c-----------ccceeE
Confidence 345666531 246799999999887777433 22222234556789988889998751 1 224567
Q ss_pred EEEEeCCCCcccccC
Q 016367 183 EVLTVGIDHTWRYLG 197 (390)
Q Consensus 183 ~vyss~~~~~W~~~~ 197 (390)
..+++... -|-...
T Consensus 122 DAvtl~~~-~w~~k~ 135 (141)
T 1ugj_A 122 DAFTIQGH-LWQSKK 135 (141)
T ss_dssp SEEEECST-TTSCSC
T ss_pred EEEEEhhH-hhcCCC
Confidence 88889988 886543
No 189
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=26.22 E-value=3.3e+02 Score=23.80 Aligned_cols=195 Identities=8% Similarity=0.002 Sum_probs=95.8
Q ss_pred ecCce-EEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCe
Q 016367 103 SCNGL-LCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSD 181 (390)
Q Consensus 103 s~~GL-l~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~ 181 (390)
|-+|- +.+........+.|||+.|++.+....... ....+.|.|.. ++-+.. . .-.
T Consensus 142 SpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~-----~V~~v~fspdg-~~l~s~--s---------------~~~ 198 (365)
T 4h5i_A 142 SREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG-----EVKDLHFSTDG-KVVAYI--T---------------GSS 198 (365)
T ss_dssp CTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS-----CCCEEEECTTS-SEEEEE--C---------------SSC
T ss_pred cCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC-----ceEEEEEccCC-ceEEec--c---------------cee
Confidence 44553 333333235789999999988765443211 13356677643 332222 1 123
Q ss_pred EEEEEeCCCCcccccCCCCcccCCC--CceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee---cCCCCCCCCC
Q 016367 182 VEVLTVGIDHTWRYLGPVPWRLNPG--ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI---GLPDCGSLSV 256 (390)
Q Consensus 182 ~~vyss~~~~~W~~~~~~p~~~~~~--~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i---~lP~~~~~~~ 256 (390)
..++...++ .-...... ...... .-...-+|.....+... ......+..+|+........ .+..+..
T Consensus 199 ~~~~~~~~~-~~~~~~~~-~~~~~~v~~v~fspdg~~l~~~s~d---~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--- 270 (365)
T 4h5i_A 199 LEVISTVTG-SCIARKTD-FDKNWSLSKINFIADDTVLIAASLK---KGKGIVLTKISIKSGNTSVLRSKQVTNRFK--- 270 (365)
T ss_dssp EEEEETTTC-CEEEEECC-CCTTEEEEEEEEEETTEEEEEEEES---SSCCEEEEEEEEETTEEEEEEEEEEESSCS---
T ss_pred EEEEEeccC-cceeeeec-CCCCCCEEEEEEcCCCCEEEEEecC---CcceeEEeecccccceecceeeeeecCCCC---
Confidence 556666665 32211100 000000 11123355544443322 11123556666655444332 2222211
Q ss_pred cceEEEE-eCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee
Q 016367 257 CNFHLVV-LRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK 335 (390)
Q Consensus 257 ~~~~L~~-~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
.-..+.. -+|++.+.... +..+.||-++. ...+.++.- +.... +.-+++.+
T Consensus 271 ~V~~~~~Spdg~~lasgs~-D~~V~iwd~~~------~~~~~~~~~--------------------gH~~~-V~~v~fSp 322 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLASN-DNSIALVKLKD------LSMSKIFKQ--------------------AHSFA-ITEVTISP 322 (365)
T ss_dssp CEEEEEECTTSCEEEEEET-TSCEEEEETTT------TEEEEEETT--------------------SSSSC-EEEEEECT
T ss_pred CeEeEEECCCCCceEEEcC-CCEEEEEECCC------CcEEEEecC--------------------cccCC-EEEEEECC
Confidence 1122332 36777666665 77899997762 234444321 11112 67788888
Q ss_pred CCceEeeee-CCeEEEEeCCCC
Q 016367 336 NGEILLEYA-NGALVSYNPENE 356 (390)
Q Consensus 336 ~g~il~~~~-~~~l~~yd~~t~ 356 (390)
+|..|.... ++.+-.+|+.++
T Consensus 323 dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 323 DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEeCCCeEEEEEcCCC
Confidence 998777654 667899998654
No 190
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=26.07 E-value=2.4e+02 Score=25.32 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=25.0
Q ss_pred eEEEEEee-CCceEeeeeCCeEEEEeCCCCcEEEE
Q 016367 328 SQVVCDWK-NGEILLEYANGALVSYNPENEELKDL 361 (390)
Q Consensus 328 ~~~~~~~~-~g~il~~~~~~~l~~yd~~t~~~~~v 361 (390)
...+-+.+ -|-|++..+.+.+++||++|++.-..
T Consensus 262 PVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 262 PVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred eEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 44444443 45677888888899999999997665
No 191
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=25.74 E-value=67 Score=24.34 Aligned_cols=29 Identities=17% Similarity=0.216 Sum_probs=22.3
Q ss_pred ceEeeeeCCeEEEEeCCCCcEEEEEEeCC
Q 016367 338 EILLEYANGALVSYNPENEELKDLVIFDP 366 (390)
Q Consensus 338 ~il~~~~~~~l~~yd~~t~~~~~v~~~~~ 366 (390)
+|+.....-.++.||..+++|++.++.|.
T Consensus 30 ~Il~~a~~v~vY~f~~~~~~W~K~~iEG~ 58 (134)
T 2lyd_A 30 EIVDSSSHVAFYTFNSSQNEWEKTDVEGA 58 (134)
T ss_dssp EEEEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred HHHhhCCeEEEEEecCCcCceeEcCCcce
Confidence 35556555668889999999999987764
No 192
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=25.68 E-value=4.8e+02 Score=25.49 Aligned_cols=79 Identities=13% Similarity=0.020 Sum_probs=39.4
Q ss_pred ceEEECCcEEEEEeeccCCCCCceEEEEEECCCce--eeeecCC-CCCCCCCcceEEEEeCCeEEE-EEeCC-CCcEEEE
Q 016367 208 SEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEED--FGEIGLP-DCGSLSVCNFHLVVLRGCLSA-VHCLD-DKGMEIW 282 (390)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~--~~~i~lP-~~~~~~~~~~~L~~~~G~L~~-~~~~~-~~~~~IW 282 (390)
..++.+|.+|.-..++ .++++|..+.+ |+. +.+ .............+.+|.+++ ....+ ...=.|.
T Consensus 123 ~~a~~~~~v~v~~~dg--------~l~alD~~tG~~~W~~-~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~ 193 (677)
T 1kb0_A 123 GVALWKGKVYVGAWDG--------RLIALDAATGKEVWHQ-NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYIT 193 (677)
T ss_dssp CCEEETTEEEEECTTS--------EEEEEETTTCCEEEEE-ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEE
T ss_pred CceEECCEEEEEcCCC--------EEEEEECCCCCEEeee-cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEE
Confidence 4566788888766555 89999997654 433 333 110000011223345777777 32210 1122455
Q ss_pred EEeeCCCCCceEE
Q 016367 283 IMKEYKVRESWSK 295 (390)
Q Consensus 283 ~l~~~~~~~~W~~ 295 (390)
.++-...+..|..
T Consensus 194 a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 194 AYDAETGERKWRW 206 (677)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCcEEEEe
Confidence 5552212446665
No 193
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=25.62 E-value=3.1e+02 Score=23.28 Aligned_cols=89 Identities=11% Similarity=-0.013 Sum_probs=0.0
Q ss_pred CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee
Q 016367 265 RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA 344 (390)
Q Consensus 265 ~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~ 344 (390)
++.+.+.... +..+.+|.+.... ...-..+..+.- .... +..+.+..+|..++...
T Consensus 29 ~~~~l~s~s~-D~~v~~W~~~~~~-~~~~~~~~~~~~-------------h~~~---------v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 29 QPNLLLSASR-DKTLISWKLTGDD-QKFGVPVRSFKG-------------HSHI---------VQDCTLTADGAYALSAS 84 (319)
T ss_dssp CTTEEEEEET-TSEEEEEEEEEET-TEEEEEEEEEEC-------------CSSC---------EEEEEECTTSSEEEEEE
T ss_pred CccEEEEecC-CccEEEecCCCCC-ccccccceEEeC-------------Cccc---------EEEEEECCCCCEEEEEe
Q ss_pred -CCeEEEEeCCCCcEEEEEEeCCCCceEEEeeecc
Q 016367 345 -NGALVSYNPENEELKDLVIFDPPKWFCSIVHVES 378 (390)
Q Consensus 345 -~~~l~~yd~~t~~~~~v~~~~~~~~~~~~~y~~s 378 (390)
++.+..||+++++... .+.+.......+.+.++
T Consensus 85 ~D~~v~~wd~~~~~~~~-~~~~h~~~v~~~~~~~~ 118 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQ-RFVGHKSDVMSVDIDKK 118 (319)
T ss_dssp TTSEEEEEETTTTEEEE-EEECCSSCEEEEEECTT
T ss_pred CCCEEEEEECCCCCeeE-EEccCCCcEEEEEEcCC
No 194
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=24.93 E-value=1.5e+02 Score=23.43 Aligned_cols=40 Identities=10% Similarity=0.312 Sum_probs=28.0
Q ss_pred ccEEEEcCCCc-ceecccCccCCCCcceEEEEEEecCCCCeEEEEEE
Q 016367 117 NPIIVCNPFTG-SYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIV 162 (390)
Q Consensus 117 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~ 162 (390)
-.+++.||.|+ .|+. .... ...+.+.+|+..+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP--~g~~----~~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVP--TSKH----AVTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEE--SCSS----CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceee--cCCC----CeEEEEEEcCCCCEEEEEEcc
Confidence 46899999997 7853 2221 124466689888899999854
No 195
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=24.80 E-value=3.5e+02 Score=23.65 Aligned_cols=140 Identities=11% Similarity=-0.018 Sum_probs=71.5
Q ss_pred CceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEE
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEV 184 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~v 184 (390)
.+.|++... ..+...++.+.+...+-... ....++.+|+..+...+. . . ....+..
T Consensus 44 ~~~ll~~~~---~~I~~i~~~g~~~~~~~~~~-----~~~~~l~~d~~~~~ly~~--D--~------------~~~~I~r 99 (349)
T 3v64_C 44 EPVLLFANR---IDIRQVLPHRSEYTLLLNNL-----ENAIALDFHHRRELVFWS--D--V------------TLDRILR 99 (349)
T ss_dssp CCEEEEECB---SCEEEECTTSCCEEEEECSC-----SCEEEEEEETTTTEEEEE--E--T------------TTTEEEE
T ss_pred CceeEeecc---cceEEEeCCCCeeEEeecCC-----CceEEEEEeccccEEEEE--e--c------------cCCceEE
Confidence 455555554 45677777666544332211 124588888765533222 1 1 1246777
Q ss_pred EEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCCcceEE
Q 016367 185 LTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSVCNFHL 261 (390)
Q Consensus 185 yss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~L 261 (390)
++..++ .-+.+.. ..... ..++.+ +|.+||..... ..|..+|+.......+.. .... .-..+
T Consensus 100 ~~~~g~-~~~~~~~--~~~~~-p~glavd~~~g~ly~~d~~~-------~~I~~~~~dG~~~~~l~~-~~l~---~P~~i 164 (349)
T 3v64_C 100 ANLNGS-NVEEVVS--TGLES-PGGLAVDWVHDKLYWTDSGT-------SRIEVANLDGAHRKVLLW-QSLE---KPRAI 164 (349)
T ss_dssp EETTSC-SCEEEEC--SSCSC-CCEEEEETTTTEEEEEETTT-------TEEEEEETTSCSCEEEEC-TTCS---CEEEE
T ss_pred EecCCC-CceEEEe--CCCCC-ccEEEEecCCCeEEEEcCCC-------CeEEEEcCCCCceEEEEe-CCCC---CcceE
Confidence 777766 4333211 11111 234444 68999986543 389999987665444321 1111 12334
Q ss_pred EEe--CCeEEEEEeCCCCcEEEEEEe
Q 016367 262 VVL--RGCLSAVHCLDDKGMEIWIMK 285 (390)
Q Consensus 262 ~~~--~G~L~~~~~~~~~~~~IW~l~ 285 (390)
++. +|.|++.... . .-.|++..
T Consensus 165 avdp~~g~ly~td~~-~-~~~I~r~~ 188 (349)
T 3v64_C 165 ALHPMEGTIYWTDWG-N-TPRIEASS 188 (349)
T ss_dssp EEETTTTEEEEEECS-S-SCEEEEEE
T ss_pred EEecCcCeEEEeccC-C-CCEEEEEe
Confidence 443 6778886654 2 23445544
No 196
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=23.31 E-value=4e+02 Score=23.74 Aligned_cols=176 Identities=10% Similarity=0.035 Sum_probs=86.9
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCCCcccc
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGIDHTWRY 195 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~~~W~~ 195 (390)
.+.+.|||..|++....-.... .....+.+| +++-+.. . . .-.+.+++..++ .-..
T Consensus 152 dg~i~iwd~~~~~~~~~~~~h~----~~v~~l~~~---~~~l~sg--~-~-------------dg~i~vwd~~~~-~~~~ 207 (435)
T 1p22_A 152 DNTIKIWDKNTLECKRILTGHT----GSVLCLQYD---ERVIITG--S-S-------------DSTVRVWDVNTG-EMLN 207 (435)
T ss_dssp SSCEEEEESSSCCEEEEECCCS----SCEEEEECC---SSEEEEE--E-T-------------TSCEEEEESSSC-CEEE
T ss_pred CCeEEEEeCCCCeEEEEEcCCC----CcEEEEEEC---CCEEEEE--c-C-------------CCeEEEEECCCC-cEEE
Confidence 5789999998877543322111 123344443 2332222 1 1 246888998887 3221
Q ss_pred cCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee--cCCCCCCCCCcceEEEEeCCeEEEEEe
Q 016367 196 LGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI--GLPDCGSLSVCNFHLVVLRGCLSAVHC 273 (390)
Q Consensus 196 ~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i--~lP~~~~~~~~~~~L~~~~G~L~~~~~ 273 (390)
. +. .....-.++.+++.....+..+ ..|..+|+.+.+-... .+..+. ....-...+|...++..
T Consensus 208 ~--~~-~h~~~v~~l~~~~~~l~s~s~d-------g~i~vwd~~~~~~~~~~~~~~~~~----~~v~~~~~~~~~l~s~~ 273 (435)
T 1p22_A 208 T--LI-HHCEAVLHLRFNNGMMVTCSKD-------RSIAVWDMASPTDITLRRVLVGHR----AAVNVVDFDDKYIVSAS 273 (435)
T ss_dssp E--EC-CCCSCEEEEECCTTEEEEEETT-------SCEEEEECSSSSCCEEEEEECCCS----SCEEEEEEETTEEEEEE
T ss_pred E--Ec-CCCCcEEEEEEcCCEEEEeeCC-------CcEEEEeCCCCCCceeeeEecCCC----CcEEEEEeCCCEEEEEe
Confidence 1 11 0111122344455543333322 2788899876543211 111111 12222333676666555
Q ss_pred CCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEee-eeCCeEEEEe
Q 016367 274 LDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLE-YANGALVSYN 352 (390)
Q Consensus 274 ~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~-~~~~~l~~yd 352 (390)
. +..+.||-++.. ..+..+.. .. . . ..-+.+ ++..++. ..++.+..||
T Consensus 274 ~-dg~i~vwd~~~~------~~~~~~~~-------------~~-------~-~-v~~~~~--~~~~l~~g~~dg~i~iwd 322 (435)
T 1p22_A 274 G-DRTIKVWNTSTC------EFVRTLNG-------------HK-------R-G-IACLQY--RDRLVVSGSSDNTIRLWD 322 (435)
T ss_dssp T-TSEEEEEETTTC------CEEEEEEC-------------CS-------S-C-EEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred C-CCeEEEEECCcC------cEEEEEcC-------------CC-------C-c-EEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 5 778999987631 23344432 11 0 1 332333 3444444 4466799999
Q ss_pred CCCCcEEE
Q 016367 353 PENEELKD 360 (390)
Q Consensus 353 ~~t~~~~~ 360 (390)
+++++...
T Consensus 323 ~~~~~~~~ 330 (435)
T 1p22_A 323 IECGACLR 330 (435)
T ss_dssp TTTCCEEE
T ss_pred CCCCCEEE
Confidence 99876543
No 197
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=22.85 E-value=3.5e+02 Score=22.90 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=33.0
Q ss_pred cccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeEEEEEeCCC
Q 016367 116 FNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDVEVLTVGID 190 (390)
Q Consensus 116 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~~vyss~~~ 190 (390)
...+.|||..+++....-... ......+.+.|..+.+-+.+ . . .-.+.+|+..++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~l~s~-~--~-------------dg~i~iwd~~~~ 148 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGH----GNAINELKFHPRDPNLLLSV-S--K-------------DHALRLWNIQTD 148 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESC----CSCEEEEEECSSCTTEEEEE-E--T-------------TSCEEEEETTTT
T ss_pred CCEEEEEEchhceEeeeecCC----CCcEEEEEECCCCCCEEEEE-e--C-------------CCeEEEEEeecC
Confidence 568999999887754322111 11345777877545544333 1 1 246888998887
No 198
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=22.84 E-value=5e+02 Score=24.77 Aligned_cols=121 Identities=11% Similarity=0.020 Sum_probs=0.0
Q ss_pred CceEEECCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCC----CcceEEEEeCCeEEEEEeCCCCcEEE
Q 016367 207 ASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLS----VCNFHLVVLRGCLSAVHCLDDKGMEI 281 (390)
Q Consensus 207 ~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~----~~~~~L~~~~G~L~~~~~~~~~~~~I 281 (390)
..+++.+|.+|...... .+.++|..+.+...- .++...... ....-+...+|+|++...+ . .|
T Consensus 62 ~~P~v~~g~vyv~~~~~--------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d-g---~l 129 (582)
T 1flg_A 62 SQAIVSDGVIYVTASYS--------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD-A---SV 129 (582)
T ss_dssp CCCEEETTEEEEEETTT--------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT-T---EE
T ss_pred eccEEECCEEEEEcCCC--------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC-C---EE
Q ss_pred EEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC-----ceEeeee------CCeEEE
Q 016367 282 WIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG-----EILLEYA------NGALVS 350 (390)
Q Consensus 282 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~il~~~~------~~~l~~ 350 (390)
..|+-...+..|.....-.. ..... ...-.+.+++ .|++-.. +..++.
T Consensus 130 ~AlD~~TG~~~W~~~~~~~~--------------------~~~~~-~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~a 188 (582)
T 1flg_A 130 VALNKNTGKVVWKKKFADHG--------------------AGYTM-TGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFA 188 (582)
T ss_dssp EEEESSSCCEEEEEECSCGG--------------------GTCBC-CSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEE
T ss_pred EEEECCCCCEEeeecCCCCC--------------------cCccc-ccCCEEeCCCcCCcEEEEEeccccccCCCCEEEE
Q ss_pred EeCCCCcEEE
Q 016367 351 YNPENEELKD 360 (390)
Q Consensus 351 yd~~t~~~~~ 360 (390)
||.+|++...
T Consensus 189 lD~~tG~~~W 198 (582)
T 1flg_A 189 RDPDTGEEIW 198 (582)
T ss_dssp ECTTTCCEEE
T ss_pred EECCCCCEEe
No 199
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=22.63 E-value=3.9e+02 Score=23.45 Aligned_cols=207 Identities=10% Similarity=0.069 Sum_probs=95.2
Q ss_pred ecCceEEeeeccccccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCCCeE
Q 016367 103 SCNGLLCVSDALYFNPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRKSDV 182 (390)
Q Consensus 103 s~~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~~~~ 182 (390)
+.+|-.++.... ...+.|||..+++....-.... .....+.+.|.. ++ ++... . ...+
T Consensus 132 s~dg~~l~s~~~-d~~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~p~~-~~-l~s~s--~-------------d~~v 189 (393)
T 1erj_A 132 SPDGKFLATGAE-DRLIRIWDIENRKIVMILQGHE----QDIYSLDYFPSG-DK-LVSGS--G-------------DRTV 189 (393)
T ss_dssp CTTSSEEEEEET-TSCEEEEETTTTEEEEEECCCS----SCEEEEEECTTS-SE-EEEEE--T-------------TSEE
T ss_pred CCCCCEEEEEcC-CCeEEEEECCCCcEEEEEccCC----CCEEEEEEcCCC-CE-EEEec--C-------------CCcE
Confidence 335544444332 5789999999887543322111 134567777753 33 22211 1 2468
Q ss_pred EEEEeCCCCcccccCCCCcccCCCCceEEE---CCcEEEEEeeccCCCCCceEEEEEECCCceee-eecCCCCCCCC--C
Q 016367 183 EVLTVGIDHTWRYLGPVPWRLNPGASEALL---NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFG-EIGLPDCGSLS--V 256 (390)
Q Consensus 183 ~vyss~~~~~W~~~~~~p~~~~~~~~~v~~---~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~--~ 256 (390)
.+++.+++ .-...-.. ......+.+ +|.+...+..+ ..|..+|+.+.... .+..+...... .
T Consensus 190 ~iwd~~~~-~~~~~~~~----~~~v~~~~~~~~~~~~l~~~s~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~ 257 (393)
T 1erj_A 190 RIWDLRTG-QCSLTLSI----EDGVTTVAVSPGDGKYIAAGSLD-------RAVRVWDSETGFLVERLDSENESGTGHKD 257 (393)
T ss_dssp EEEETTTT-EEEEEEEC----SSCEEEEEECSTTCCEEEEEETT-------SCEEEEETTTCCEEEEEC------CCCSS
T ss_pred EEEECCCC-eeEEEEEc----CCCcEEEEEECCCCCEEEEEcCC-------CcEEEEECCCCcEEEeecccccCCCCCCC
Confidence 88888887 43221110 000112222 44443333222 26888898776543 23222111000 0
Q ss_pred cceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee
Q 016367 257 CNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK 335 (390)
Q Consensus 257 ~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
.-..+... +|++.+.... +..+.||-++.............-.. . ..+. +.... ..-+++..
T Consensus 258 ~v~~v~~~~~g~~l~s~s~-d~~v~~wd~~~~~~~~~~~~~~~~~~--~----------~~~~---~h~~~-v~~~~~~~ 320 (393)
T 1erj_A 258 SVYSVVFTRDGQSVVSGSL-DRSVKLWNLQNANNKSDSKTPNSGTC--E----------VTYI---GHKDF-VLSVATTQ 320 (393)
T ss_dssp CEEEEEECTTSSEEEEEET-TSEEEEEEC---------------CE--E----------EEEE---CCSSC-EEEEEECG
T ss_pred CEEEEEECCCCCEEEEEeC-CCEEEEEECCCCCCcccccCCCCCcc--e----------EEEe---cccCc-EEEEEECC
Confidence 12223322 5666665555 78999999874321100000000000 0 0000 11222 55566766
Q ss_pred CCceEeee-eCCeEEEEeCCCCcEEE
Q 016367 336 NGEILLEY-ANGALVSYNPENEELKD 360 (390)
Q Consensus 336 ~g~il~~~-~~~~l~~yd~~t~~~~~ 360 (390)
++..++.. .++.+..||.++++...
T Consensus 321 ~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 321 NDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp GGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 77665554 46679999999887543
No 200
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=22.57 E-value=4.1e+02 Score=23.66 Aligned_cols=138 Identities=12% Similarity=0.042 Sum_probs=69.9
Q ss_pred CeEEEEEeCCCCccc-ccCCCCcccCCCCceEEECCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCCCCc
Q 016367 180 SDVEVLTVGIDHTWR-YLGPVPWRLNPGASEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSLSVC 257 (390)
Q Consensus 180 ~~~~vyss~~~~~W~-~~~~~p~~~~~~~~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~ 257 (390)
-.+.+|+.+++ .-. .+.. .......+..+|.....+..+ ..|..+|+.+.+. ..+..+.... .
T Consensus 299 ~~i~i~d~~~~-~~~~~~~~----~~~~v~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~---~ 363 (445)
T 2ovr_B 299 TSIRVWDVETG-NCIHTLTG----HQSLTSGMELKDNILVSGNAD-------STVKIWDIKTGQCLQTLQGPNKHQ---S 363 (445)
T ss_dssp SCEEEEETTTC-CEEEEECC----CCSCEEEEEEETTEEEEEETT-------SCEEEEETTTCCEEEEECSTTSCS---S
T ss_pred CeEEEEECCCC-CEEEEEcC----CcccEEEEEEeCCEEEEEeCC-------CeEEEEECCCCcEEEEEccCCCCC---C
Confidence 35777887776 211 1111 111122445566644433322 2788999976543 4445443221 1
Q ss_pred ceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCC
Q 016367 258 NFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNG 337 (390)
Q Consensus 258 ~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 337 (390)
...-...++.+.++... +..+.||-++. .. .+..+.... .. ..... ..-+.+.+++
T Consensus 364 ~v~~~~~~~~~l~s~~~-dg~v~iwd~~~----~~--~~~~~~~~~-----------~~-----~~~~~-v~~~~~s~~~ 419 (445)
T 2ovr_B 364 AVTCLQFNKNFVITSSD-DGTVKLWDLKT----GE--FIRNLVTLE-----------SG-----GSGGV-VWRIRASNTK 419 (445)
T ss_dssp CEEEEEECSSEEEEEET-TSEEEEEETTT----CC--EEEEEEECT-----------TG-----GGTCE-EEEEEECSSE
T ss_pred CEEEEEECCCEEEEEeC-CCeEEEEECCC----Cc--eeeeeeccc-----------cC-----CCCce-EEEEEecCCE
Confidence 22223346666665555 78999998873 12 333432100 00 11112 5556676676
Q ss_pred ceEeeee-CC----eEEEEeCCCC
Q 016367 338 EILLEYA-NG----ALVSYNPENE 356 (390)
Q Consensus 338 ~il~~~~-~~----~l~~yd~~t~ 356 (390)
.++.... ++ ++..||.+.+
T Consensus 420 ~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 420 LVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEECSSSSSCCEEEEEECCCC
T ss_pred EEEEEcccCCCCccEEEEEECCCC
Confidence 6655543 33 3888888754
No 201
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=22.43 E-value=4.2e+02 Score=23.73 Aligned_cols=66 Identities=9% Similarity=-0.032 Sum_probs=39.8
Q ss_pred CeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeee-e
Q 016367 266 GCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEY-A 344 (390)
Q Consensus 266 G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~-~ 344 (390)
|++.+.... +..+.||-+... .- ...+-. +.... +.-+++. ++..++.. .
T Consensus 210 ~~~l~s~~~-d~~i~vwd~~~~----~~--~~~~~~--------------------~h~~~-v~~~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 210 HQFIITSDR-DEHIKISHYPQC----FI--VDKWLF--------------------GHKHF-VSSICCG-KDYLLLSAGG 260 (450)
T ss_dssp CEEEEEEET-TSCEEEEEESCT----TC--EEEECC--------------------CCSSC-EEEEEEC-STTEEEEEES
T ss_pred CcEEEEEcC-CCcEEEEECCCC----ce--eeeeec--------------------CCCCc-eEEEEEC-CCCEEEEEeC
Confidence 666665555 779999998742 11 112111 01112 5556677 77766655 4
Q ss_pred CCeEEEEeCCCCcEEE
Q 016367 345 NGALVSYNPENEELKD 360 (390)
Q Consensus 345 ~~~l~~yd~~t~~~~~ 360 (390)
++.+..||+++++...
T Consensus 261 d~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 261 DDKIFAWDWKTGKNLS 276 (450)
T ss_dssp SSEEEEEETTTCCEEE
T ss_pred CCeEEEEECCCCcEee
Confidence 6689999999987543
No 202
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=22.27 E-value=5.7e+02 Score=25.18 Aligned_cols=199 Identities=11% Similarity=0.078 Sum_probs=98.0
Q ss_pred CceEEeeeccccccEEEEcCCCcceecccCcc-----CCCCcceEEEEEEecCCCCeEEEEEEEeccccccccCCCCCCC
Q 016367 105 NGLLCVSDALYFNPIIVCNPFTGSYLELAKAT-----QHAQEELAFGFGCNSSTMEYKVVRIVFNFNTYRSLRDRGWPRK 179 (390)
Q Consensus 105 ~GLl~~~~~~~~~~~~V~NP~T~~~~~LP~~~-----~~~~~~~~~~~~~d~~~~~ykvv~~~~~~~~~~~~~~~~~~~~ 179 (390)
+|-|-+-.. ...+..++|.++.+..+...+ ..-......++..|+.. . +.+.. . .
T Consensus 323 ~g~lWigt~--~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~---lWigt-~-------------~ 382 (781)
T 3v9f_A 323 FNNIWIGTW--GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG-K---LWIGT-D-------------G 382 (781)
T ss_dssp SCCEEEEEB--SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTS-C---EEEEE-B-------------S
T ss_pred CCCEEEEec--CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCC-C---EEEEe-C-------------C
Confidence 444433332 356888899888766654321 00011123455555432 2 22221 1 1
Q ss_pred CeEEEEEeCCCCcccccCCCCcccCCC-CceEEE--CCcEEEEEeeccCCCCCceEEEEEECCCceeeeecCCCCCCCCC
Q 016367 180 SDVEVLTVGIDHTWRYLGPVPWRLNPG-ASEALL--NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEIGLPDCGSLSV 256 (390)
Q Consensus 180 ~~~~vyss~~~~~W~~~~~~p~~~~~~-~~~v~~--~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~ 256 (390)
..+..|+..++ .++.... +...... -.+++. +|. .|++... ..+..||..+.++..+..+. ... .
T Consensus 383 ~Gl~~~~~~~~-~~~~~~~-~~~~~~~~v~~i~~d~~g~-lWigt~~-------~Gl~~~~~~~~~~~~~~~~~-~~~-~ 450 (781)
T 3v9f_A 383 GGINVFENGKR-VAIYNKE-NRELLSNSVLCSLKDSEGN-LWFGTYL-------GNISYYNTRLKKFQIIELEK-NEL-L 450 (781)
T ss_dssp SCEEEEETTEE-EEECC------CCCSBEEEEEECTTSC-EEEEETT-------EEEEEECSSSCEEEECCSTT-TCC-C
T ss_pred CcEEEEECCCC-eEEEccC-CCCCCCcceEEEEECCCCC-EEEEecc-------CCEEEEcCCCCcEEEeccCC-CCC-C
Confidence 23666777766 6655421 1111110 123444 354 4666542 27999999999998875441 111 1
Q ss_pred cceEEEEe-CCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEee
Q 016367 257 CNFHLVVL-RGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWK 335 (390)
Q Consensus 257 ~~~~L~~~-~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (390)
.-..+.+. +|.|.+.... . |+.++.. +..|........ ... .... +..+....
T Consensus 451 ~v~~i~~d~~g~lwigt~~---G--l~~~~~~--~~~~~~~~~~~~-------------~~~-----~~~~-i~~i~~d~ 504 (781)
T 3v9f_A 451 DVRVFYEDKNKKIWIGTHA---G--VFVIDLA--SKKVIHHYDTSN-------------SQL-----LENF-VRSIAQDS 504 (781)
T ss_dssp CEEEEEECTTSEEEEEETT---E--EEEEESS--SSSCCEEECTTT-------------SSC-----SCSC-EEEEEECT
T ss_pred eEEEEEECCCCCEEEEECC---c--eEEEeCC--CCeEEecccCcc-------------ccc-----ccce-eEEEEEcC
Confidence 23344443 5677764332 2 3334321 334544322111 011 0112 44455666
Q ss_pred CCceEeeeeCCeEEEEeCCCCcEEEE
Q 016367 336 NGEILLEYANGALVSYNPENEELKDL 361 (390)
Q Consensus 336 ~g~il~~~~~~~l~~yd~~t~~~~~v 361 (390)
+|.|.+-....+++.||+++++++.+
T Consensus 505 ~g~lWigt~~~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 505 EGRFWIGTFGGGVGIYTPDMQLVRKF 530 (781)
T ss_dssp TCCEEEEESSSCEEEECTTCCEEEEE
T ss_pred CCCEEEEEcCCCEEEEeCCCCeEEEc
Confidence 77777777656799999999887765
No 203
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.16 E-value=3.2e+02 Score=24.72 Aligned_cols=24 Identities=21% Similarity=0.283 Sum_probs=18.0
Q ss_pred ceEEEEEECCCc---eeeeecCCCCCC
Q 016367 230 RLRIMSFDLAEE---DFGEIGLPDCGS 253 (390)
Q Consensus 230 ~~~il~fD~~~e---~~~~i~lP~~~~ 253 (390)
+..|++||+.++ ....+.+|....
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~ 148 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLV 148 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGC
T ss_pred CceEEEEECCCCCceeEEEEECCHHhc
Confidence 358999999987 456678886543
No 204
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=21.86 E-value=5.7e+02 Score=25.00 Aligned_cols=80 Identities=11% Similarity=0.007 Sum_probs=40.7
Q ss_pred ceEEECCcEEEEEeeccCCCCCceEEEEEECCCce--eeeecC-CCCCCCCCcceEEEEeCCeEEE-EEeCC-CCcEEEE
Q 016367 208 SEALLNGSLHWVTMRYKNNPGPRLRIMSFDLAEED--FGEIGL-PDCGSLSVCNFHLVVLRGCLSA-VHCLD-DKGMEIW 282 (390)
Q Consensus 208 ~~v~~~G~lywl~~~~~~~~~~~~~il~fD~~~e~--~~~i~l-P~~~~~~~~~~~L~~~~G~L~~-~~~~~-~~~~~IW 282 (390)
.+++.+|.+|.-..++ .++++|..+.+ |+.-.. ....... ....-.+.+|.+++ ....+ ...=.|+
T Consensus 116 ~~~~~~g~v~v~~~dg--------~l~AlDa~TG~~~W~~~~~~~~~~~~~-~~~sP~v~~g~v~vg~~~~~~~~~g~v~ 186 (689)
T 1yiq_A 116 GVAVWKGKVYVGVLDG--------RLEAIDAKTGQRAWSVDTRADHKRSYT-ITGAPRVVNGKVVIGNGGAEFGVRGYVT 186 (689)
T ss_dssp CCEEETTEEEEECTTS--------EEEEEETTTCCEEEEEECCSCTTSCCB-CCSCCEEETTEEEECCBCTTTCCBCEEE
T ss_pred ccEEECCEEEEEccCC--------EEEEEECCCCCEeeeecCcCCCCCCcc-ccCCcEEECCEEEEEeCCCccCCCCEEE
Confidence 4567889998776555 89999997654 443321 1111000 11122345788777 32210 1223455
Q ss_pred EEeeCCCCCceEEE
Q 016367 283 IMKEYKVRESWSKD 296 (390)
Q Consensus 283 ~l~~~~~~~~W~~~ 296 (390)
.++-...+..|...
T Consensus 187 a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 187 AYDAETGKEAWRFY 200 (689)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCcEEEEec
Confidence 55532225567654
No 205
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=21.85 E-value=3.6e+02 Score=22.65 Aligned_cols=96 Identities=11% Similarity=-0.055 Sum_probs=52.1
Q ss_pred eEEEEEECCCceeee-ecCCCCCCCCCcceEEEEe-CCe-EEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCccc
Q 016367 231 LRIMSFDLAEEDFGE-IGLPDCGSLSVCNFHLVVL-RGC-LSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASL 307 (390)
Q Consensus 231 ~~il~fD~~~e~~~~-i~lP~~~~~~~~~~~L~~~-~G~-L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~ 307 (390)
..|..+|+.+.+... +..+.. ...+... +|+ |++.... ...+.+|-++.. .- ....+..
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~~------~~~~~~s~dg~~l~~~~~~-~~~i~~~d~~~~----~~-~~~~~~~------ 81 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGYD------FVDTAITSDCSNVVVTSDF-CQTLVQIETQLE----PP-KVVAIQE------ 81 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCCC------EEEEEECSSSCEEEEEEST-TCEEEEEECSSS----SC-EEEEEEE------
T ss_pred CeEEEEeCcccceeeeEEccCC------cceEEEcCCCCEEEEEeCC-CCeEEEEECCCC----ce-eEEeccc------
Confidence 389999998877744 354422 1244443 566 5555544 556666655421 11 1223332
Q ss_pred ccCcCcchhhhhccCCCCcceEE-EEEeeCCceEeeeeCC----eEEEEeCCCCcEEEE
Q 016367 308 RENARPHLEMLKKSGLGRGSSQV-VCDWKNGEILLEYANG----ALVSYNPENEELKDL 361 (390)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~il~~~~~~----~l~~yd~~t~~~~~v 361 (390)
.. . ..- +.+..+|+.++..... .+..||+++++....
T Consensus 82 -------~~-------~---~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 82 -------GQ-------S---SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp -------CS-------S---CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred -------CC-------C---CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 11 0 122 4566777755554433 799999998876543
No 206
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=21.14 E-value=1.6e+02 Score=21.53 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=30.2
Q ss_pred ccEEEEcCCCcceecccCccCCCCcceEEEEEEecCCCCeEEEEEEE
Q 016367 117 NPIIVCNPFTGSYLELAKATQHAQEELAFGFGCNSSTMEYKVVRIVF 163 (390)
Q Consensus 117 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~d~~~~~ykvv~~~~ 163 (390)
-.+++++|.|++|. |....... ...+.+..|...+.|.|+....
T Consensus 11 A~V~~~d~~~~~W~--p~~~g~~g-vs~V~~~~d~~~~~yrI~~~~l 54 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGTGPQA-FSRVQIYHNPTANSFRVVGRKM 54 (115)
T ss_dssp EECBEECTTTSSCC--BSSCSCCC-CEEEEEEEETTTTEEEEEEEES
T ss_pred EEEEEEcCCCCcee--ECCCCCCC-ccEEEEEEeCCCCEEEEEEEEc
Confidence 46888999999985 44321111 1246788898889999988653
No 207
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=20.91 E-value=3.9e+02 Score=22.77 Aligned_cols=141 Identities=9% Similarity=-0.073 Sum_probs=77.0
Q ss_pred eEEEEEeCCCCcccccCCCCcccCCCCceEEE-CCcEEEEEeeccCCCCCceEEEEEECCCcee-eeecCCCCCCCCCcc
Q 016367 181 DVEVLTVGIDHTWRYLGPVPWRLNPGASEALL-NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDF-GEIGLPDCGSLSVCN 258 (390)
Q Consensus 181 ~~~vyss~~~~~W~~~~~~p~~~~~~~~~v~~-~G~lywl~~~~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~ 258 (390)
.+.+++..+++ =.... ++. ..+..++.. ++.+|-+.+.. ..+.+||..+-+. ..++.+.. .
T Consensus 76 ~v~~iD~~Tgk-v~~~~-l~~--~~FgeGit~~g~~Ly~ltw~~-------~~v~V~D~~Tl~~~~ti~~~~e------G 138 (268)
T 3nok_A 76 TLRQLSLESAQ-PVWME-RLG--NIFAEGLASDGERLYQLTWTE-------GLLFTWSGMPPQRERTTRYSGE------G 138 (268)
T ss_dssp EEEECCSSCSS-CSEEE-ECT--TCCEEEEEECSSCEEEEESSS-------CEEEEEETTTTEEEEEEECSSC------C
T ss_pred EEEEEECCCCc-EEeEE-CCC--CcceeEEEEeCCEEEEEEccC-------CEEEEEECCcCcEEEEEeCCCc------e
Confidence 38888888883 21111 222 222233444 56677776543 4899999987544 55666533 2
Q ss_pred eEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCCceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCc
Q 016367 259 FHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRESWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGE 338 (390)
Q Consensus 259 ~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 338 (390)
.-|+..++.|++.... . +|++++-. .=..+.+|.. ..... ... . ..-+... +|+
T Consensus 139 wGLt~Dg~~L~vSdGs--~--~l~~iDp~----T~~v~~~I~V-------------~~~g~--~v~-~-lNeLe~~-dG~ 192 (268)
T 3nok_A 139 WGLCYWNGKLVRSDGG--T--MLTFHEPD----GFALVGAVQV-------------KLRGQ--PVE-L-INELECA-NGV 192 (268)
T ss_dssp CCEEEETTEEEEECSS--S--EEEEECTT----TCCEEEEEEC-------------EETTE--ECC-C-EEEEEEE-TTE
T ss_pred eEEecCCCEEEEECCC--C--EEEEEcCC----CCeEEEEEEe-------------CCCCc--ccc-c-ccccEEe-CCE
Confidence 3444556677776432 2 57777622 2234556665 11000 000 1 2222322 677
Q ss_pred eEeee-eCCeEEEEeCCCCcEE-EEEEe
Q 016367 339 ILLEY-ANGALVSYNPENEELK-DLVIF 364 (390)
Q Consensus 339 il~~~-~~~~l~~yd~~t~~~~-~v~~~ 364 (390)
|+... ..+.+...|++|++.. .|.+.
T Consensus 193 lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 193 IYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp EEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred EEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 77655 3567999999999875 44543
No 208
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=20.85 E-value=5.7e+02 Score=24.62 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=24.3
Q ss_pred eEEEEEeeCCceEeeee-CCeEEEEeCCCCcEEE
Q 016367 328 SQVVCDWKNGEILLEYA-NGALVSYNPENEELKD 360 (390)
Q Consensus 328 ~~~~~~~~~g~il~~~~-~~~l~~yd~~t~~~~~ 360 (390)
+.-+++..+|..++... ++.+..||+.+++...
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~ 466 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR 466 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCccee
Confidence 56667777887766654 6679999999886543
No 209
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=20.65 E-value=3.8e+02 Score=22.46 Aligned_cols=126 Identities=8% Similarity=-0.039 Sum_probs=0.0
Q ss_pred CCcEEEEEeeccCCCCCceEEEEEECCCceeeee-cCCCCCCCCCcceEEEEeCCeEEEEEeCCCCcEEEEEEeeCCCCC
Q 016367 213 NGSLHWVTMRYKNNPGPRLRIMSFDLAEEDFGEI-GLPDCGSLSVCNFHLVVLRGCLSAVHCLDDKGMEIWIMKEYKVRE 291 (390)
Q Consensus 213 ~G~lywl~~~~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~L~~~~G~L~~~~~~~~~~~~IW~l~~~~~~~ 291 (390)
+|.+-..+..+ ..|..+|+.+...... ...... ....-...+|++.+.... +..+.||-++
T Consensus 24 ~~~~l~s~~~d-------g~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~s~s~-d~~i~vwd~~------ 85 (304)
T 2ynn_A 24 TEPWVLTTLYS-------GRVELWNYETQVEVRSIQVTETP----VRAGKFIARKNWIIVGSD-DFRIRVFNYN------ 85 (304)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGGTEEEEEET-TSEEEEEETT------
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCceeEEeeccCCc----EEEEEEeCCCCEEEEECC-CCEEEEEECC------
Q ss_pred ceEEEEEEccCCCcccccCcCcchhhhhccCCCCcceEEEEEeeCCceEeeee-CCeEEEEeCCCCcEEEEEEeCCCCce
Q 016367 292 SWSKDYIIGTYLPASLRENARPHLEMLKKSGLGRGSSQVVCDWKNGEILLEYA-NGALVSYNPENEELKDLVIFDPPKWF 370 (390)
Q Consensus 292 ~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~il~~~~-~~~l~~yd~~t~~~~~v~~~~~~~~~ 370 (390)
.-..+..+.- .... +.-+++.+++..++... ++.+..||++++.-....+.+.....
T Consensus 86 ~~~~~~~~~~-------------h~~~---------v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v 143 (304)
T 2ynn_A 86 TGEKVVDFEA-------------HPDY---------IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV 143 (304)
T ss_dssp TCCEEEEEEC-------------CSSC---------EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCE
T ss_pred CCcEEEEEeC-------------CCCc---------EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcE
Q ss_pred EEEeeecc
Q 016367 371 CSIVHVES 378 (390)
Q Consensus 371 ~~~~y~~s 378 (390)
..+.+.|.
T Consensus 144 ~~v~~~p~ 151 (304)
T 2ynn_A 144 MCVAFNPK 151 (304)
T ss_dssp EEEEECTT
T ss_pred EEEEECCC
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=20.33 E-value=3.9e+02 Score=22.46 Aligned_cols=33 Identities=9% Similarity=0.178 Sum_probs=24.1
Q ss_pred EEEeeCCceEeeeeCCeEEEEeCCCCcEEEEEEe
Q 016367 331 VCDWKNGEILLEYANGALVSYNPENEELKDLVIF 364 (390)
Q Consensus 331 ~~~~~~g~il~~~~~~~l~~yd~~t~~~~~v~~~ 364 (390)
+.+..+|.|++.. ..+++.||++.+.+..+...
T Consensus 244 i~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 244 FCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp EEECTTSCEEECC-SSEEEEECTTSCEEEEEECS
T ss_pred EEECCCCCEEEec-CCcEEEECCCCCEEEEEECC
Confidence 4566778766655 55699999988877777654
Done!