Query 016368
Match_columns 390
No_of_seqs 228 out of 2805
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 12:24:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016368.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016368hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 2.9E-37 9.8E-42 283.8 30.7 238 100-369 30-281 (302)
2 3ii7_A Kelch-like protein 7; p 100.0 1.6E-37 5.4E-42 286.1 28.6 250 74-369 12-277 (306)
3 1zgk_A Kelch-like ECH-associat 100.0 9.7E-37 3.3E-41 281.2 31.4 260 73-374 24-299 (308)
4 2vpj_A Kelch-like protein 12; 100.0 3E-36 1E-40 276.8 31.0 238 100-369 31-283 (301)
5 4asc_A Kelch repeat and BTB do 100.0 6.9E-36 2.4E-40 276.3 28.2 242 101-369 14-282 (315)
6 2woz_A Kelch repeat and BTB do 100.0 6.7E-35 2.3E-39 270.1 30.0 244 101-372 25-295 (318)
7 4asc_A Kelch repeat and BTB do 100.0 1.5E-33 5.1E-38 260.6 23.9 221 100-348 67-304 (315)
8 2uvk_A YJHT; unknown function, 100.0 6.5E-33 2.2E-37 260.8 27.3 245 101-371 32-349 (357)
9 2woz_A Kelch repeat and BTB do 100.0 1.5E-33 5.2E-38 261.0 22.3 220 101-348 79-314 (318)
10 2xn4_A Kelch-like protein 2; s 100.0 9.2E-33 3.1E-37 253.7 26.2 252 55-344 36-302 (302)
11 1zgk_A Kelch-like ECH-associat 100.0 8.7E-33 3E-37 254.7 25.8 254 51-340 41-308 (308)
12 3ii7_A Kelch-like protein 7; p 100.0 5.8E-33 2E-37 255.5 23.9 253 53-342 28-295 (306)
13 2vpj_A Kelch-like protein 12; 100.0 3.1E-32 1.1E-36 250.0 25.2 250 52-341 34-300 (301)
14 2uvk_A YJHT; unknown function, 100.0 3E-30 1E-34 242.6 24.2 222 114-368 2-298 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 7.7E-29 2.6E-33 251.9 24.4 212 141-369 392-640 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 1.3E-28 4.6E-33 250.2 23.8 220 100-350 412-674 (695)
17 1k3i_A Galactose oxidase precu 99.9 4E-26 1.4E-30 231.3 23.3 263 57-350 174-530 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.3E-26 4.4E-31 235.0 16.0 234 102-369 168-502 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.2 1E-08 3.6E-13 98.1 25.5 187 141-362 163-349 (445)
20 1p22_A F-BOX/WD-repeat protein 99.1 8.6E-09 2.9E-13 98.5 23.0 190 141-362 177-366 (435)
21 3v7d_B Cell division control p 99.1 1.7E-08 5.9E-13 97.0 23.6 186 146-362 172-382 (464)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 98.8 2.4E-09 8.1E-14 70.1 3.1 42 30-71 5-49 (53)
23 3dsm_A Uncharacterized protein 98.6 2E-05 6.9E-10 72.1 25.4 222 99-363 16-255 (328)
24 3dsm_A Uncharacterized protein 98.6 1.2E-05 4E-10 73.7 21.8 218 100-362 64-303 (328)
25 2e31_A FBS1, F-box only protei 98.5 1.8E-08 6.2E-13 89.8 2.2 44 29-72 46-93 (297)
26 3mbr_X Glutamine cyclotransfer 98.4 6.3E-05 2.2E-09 65.2 21.5 159 188-367 23-185 (243)
27 3nol_A Glutamine cyclotransfer 98.3 8.2E-05 2.8E-09 65.1 18.6 158 189-368 46-208 (262)
28 3mbr_X Glutamine cyclotransfer 98.2 0.00087 3E-08 58.0 24.2 195 141-361 24-235 (243)
29 3nol_A Glutamine cyclotransfer 98.2 0.00029 9.9E-09 61.6 20.0 189 145-360 50-255 (262)
30 2iwa_A Glutamine cyclotransfer 98.1 0.00078 2.7E-08 59.4 21.6 178 163-362 43-238 (266)
31 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0014 4.7E-08 60.7 24.0 164 164-358 198-375 (376)
32 3nok_A Glutaminyl cyclase; bet 98.1 0.00029 9.8E-09 61.7 17.4 153 189-368 58-217 (268)
33 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.0014 4.8E-08 60.7 23.0 182 164-370 63-266 (376)
34 2iwa_A Glutamine cyclotransfer 98.0 0.00058 2E-08 60.2 19.0 159 189-368 24-188 (266)
35 1rwi_B Serine/threonine-protei 97.9 0.0019 6.6E-08 56.4 21.0 176 164-362 87-265 (270)
36 2z2n_A Virginiamycin B lyase; 97.9 0.0042 1.4E-07 54.8 23.2 172 164-359 78-253 (299)
37 3vgz_A Uncharacterized protein 97.9 0.0091 3.1E-07 54.1 26.0 219 99-362 68-304 (353)
38 3nok_A Glutaminyl cyclase; bet 97.9 0.0018 6E-08 56.7 19.1 189 141-358 58-263 (268)
39 1p22_A F-BOX/WD-repeat protein 97.9 0.0014 4.8E-08 62.0 20.4 190 141-362 137-326 (435)
40 2qc5_A Streptogramin B lactona 97.8 0.0058 2E-07 54.0 22.7 173 164-360 83-259 (300)
41 1l0q_A Surface layer protein; 97.8 0.00052 1.8E-08 63.7 15.9 172 164-362 54-234 (391)
42 1q7f_A NHL, brain tumor CG1071 97.8 0.0051 1.7E-07 54.3 21.4 178 164-362 100-281 (286)
43 1rwi_B Serine/threonine-protei 97.8 0.0042 1.4E-07 54.2 20.3 175 164-362 46-223 (270)
44 2z2n_A Virginiamycin B lyase; 97.8 0.011 3.9E-07 52.0 23.2 174 164-362 120-296 (299)
45 3bws_A Protein LP49; two-domai 97.8 0.0048 1.6E-07 57.9 21.7 175 164-362 144-335 (433)
46 1l0q_A Surface layer protein; 97.6 0.00087 3E-08 62.1 14.5 172 164-362 12-190 (391)
47 1q7f_A NHL, brain tumor CG1071 97.6 0.015 5.2E-07 51.2 22.1 180 164-362 51-239 (286)
48 2qc5_A Streptogramin B lactona 97.6 0.009 3.1E-07 52.7 20.3 172 164-359 41-216 (300)
49 3v65_B Low-density lipoprotein 97.6 0.052 1.8E-06 50.5 27.4 174 163-362 137-319 (386)
50 3u4y_A Uncharacterized protein 97.6 0.0036 1.2E-07 56.4 16.9 221 100-362 20-253 (331)
51 2ovr_B FBW7, F-BOX/WD repeat p 97.5 0.014 4.7E-07 55.1 20.9 284 31-362 16-309 (445)
52 2hqs_A Protein TOLB; TOLB, PAL 97.5 0.023 7.7E-07 53.5 22.0 211 146-386 189-409 (415)
53 1ijq_A LDL receptor, low-densi 97.5 0.056 1.9E-06 48.7 26.1 175 163-362 51-239 (316)
54 1npe_A Nidogen, entactin; glyc 97.5 0.047 1.6E-06 47.6 22.7 178 163-362 57-239 (267)
55 3jrp_A Fusion protein of prote 97.5 0.0082 2.8E-07 54.8 18.3 192 147-362 23-241 (379)
56 3vgz_A Uncharacterized protein 97.4 0.016 5.3E-07 52.5 19.7 181 163-362 68-263 (353)
57 1gxr_A ESG1, transducin-like e 97.4 0.017 5.7E-07 51.7 19.7 181 146-359 152-335 (337)
58 1gxr_A ESG1, transducin-like e 97.4 0.018 6.2E-07 51.4 19.8 184 147-362 109-297 (337)
59 4ery_A WD repeat-containing pr 97.4 0.023 8E-07 50.6 20.1 187 147-362 77-269 (312)
60 3u4y_A Uncharacterized protein 97.4 0.0097 3.3E-07 53.5 17.3 179 165-362 109-305 (331)
61 4aez_A CDC20, WD repeat-contai 97.3 0.043 1.5E-06 51.0 21.7 176 164-362 113-294 (401)
62 4aez_A CDC20, WD repeat-contai 97.3 0.019 6.5E-07 53.4 19.0 193 141-362 180-381 (401)
63 3hfq_A Uncharacterized protein 97.3 0.0064 2.2E-07 55.3 14.9 229 97-360 15-270 (347)
64 3hfq_A Uncharacterized protein 97.3 0.0059 2E-07 55.5 14.7 197 149-361 4-218 (347)
65 3m0c_C LDL receptor, low-densi 97.3 0.21 7.3E-06 51.0 27.3 146 195-362 482-633 (791)
66 1pjx_A Dfpase, DIISOPROPYLFLUO 97.2 0.012 3.9E-07 52.5 16.0 180 165-362 93-300 (314)
67 3vl1_A 26S proteasome regulato 97.2 0.062 2.1E-06 49.8 21.6 106 252-362 258-366 (420)
68 3v64_C Agrin; beta propeller, 97.2 0.12 4.3E-06 47.2 29.7 174 163-362 94-276 (349)
69 1k8k_C P40, ARP2/3 complex 41 97.2 0.042 1.5E-06 49.9 20.0 193 146-362 19-234 (372)
70 1r5m_A SIR4-interacting protei 97.2 0.012 4.2E-07 54.5 16.0 186 144-360 214-424 (425)
71 4ery_A WD repeat-containing pr 97.1 0.041 1.4E-06 49.0 18.8 174 164-362 45-224 (312)
72 3zwl_B Eukaryotic translation 97.1 0.05 1.7E-06 49.1 19.5 179 164-362 54-250 (369)
73 3vl1_A 26S proteasome regulato 97.1 0.16 5.6E-06 46.9 25.5 189 146-362 108-323 (420)
74 3v64_C Agrin; beta propeller, 97.1 0.12 4.2E-06 47.2 22.0 174 164-362 53-235 (349)
75 2aq5_A Coronin-1A; WD40 repeat 97.1 0.075 2.6E-06 49.2 20.6 192 146-363 93-301 (402)
76 3fvz_A Peptidyl-glycine alpha- 97.1 0.16 5.3E-06 45.8 24.0 183 164-362 112-323 (329)
77 1got_B GT-beta; complex (GTP-b 97.1 0.058 2E-06 48.9 19.3 178 164-362 77-258 (340)
78 1k8k_C P40, ARP2/3 complex 41 97.1 0.025 8.5E-07 51.4 16.9 221 100-361 30-274 (372)
79 1ri6_A Putative isomerase YBHE 97.0 0.14 4.8E-06 45.6 21.6 146 196-360 141-307 (343)
80 3jrp_A Fusion protein of prote 97.0 0.03 1E-06 50.9 17.1 195 147-368 69-292 (379)
81 3v7d_B Cell division control p 97.0 0.13 4.6E-06 48.4 22.1 186 141-358 274-462 (464)
82 3bws_A Protein LP49; two-domai 97.0 0.01 3.4E-07 55.6 14.0 179 165-362 102-293 (433)
83 3scy_A Hypothetical bacterial 97.0 0.032 1.1E-06 50.9 16.9 231 97-360 26-290 (361)
84 1got_B GT-beta; complex (GTP-b 97.0 0.16 5.4E-06 45.9 21.4 135 215-362 165-302 (340)
85 3ow8_A WD repeat-containing pr 97.0 0.11 3.8E-06 46.7 20.2 173 164-362 102-280 (321)
86 3ow8_A WD repeat-containing pr 97.0 0.059 2E-06 48.5 18.4 171 164-359 144-319 (321)
87 2ast_B S-phase kinase-associat 97.0 0.00039 1.3E-08 63.5 3.6 41 31-71 6-49 (336)
88 2hqs_A Protein TOLB; TOLB, PAL 97.0 0.073 2.5E-06 49.9 19.5 186 100-326 203-394 (415)
89 2ojh_A Uncharacterized protein 97.0 0.084 2.9E-06 45.8 18.8 220 98-362 20-259 (297)
90 3v65_B Low-density lipoprotein 96.9 0.094 3.2E-06 48.8 19.8 174 164-362 96-278 (386)
91 3l2o_B F-box only protein 4; s 96.9 0.00018 6E-09 63.5 0.8 36 34-69 5-43 (312)
92 3no2_A Uncharacterized protein 96.9 0.031 1.1E-06 49.4 15.4 180 164-370 15-203 (276)
93 3k26_A Polycomb protein EED; W 96.9 0.16 5.4E-06 45.7 20.5 64 298-361 295-366 (366)
94 3mkq_A Coatomer beta'-subunit; 96.9 0.12 4.1E-06 52.6 21.7 188 146-362 66-260 (814)
95 2dg1_A DRP35, lactonase; beta 96.9 0.066 2.3E-06 48.1 17.8 183 164-361 66-263 (333)
96 3p5b_L Low density lipoprotein 96.9 0.29 1E-05 45.6 26.0 176 164-362 134-321 (400)
97 3jro_A Fusion protein of prote 96.8 0.042 1.4E-06 56.0 17.4 182 164-362 31-239 (753)
98 1n7d_A LDL receptor, low-densi 96.8 0.056 1.9E-06 54.6 18.1 176 163-362 427-615 (699)
99 1yfq_A Cell cycle arrest prote 96.8 0.14 4.6E-06 45.9 18.9 187 146-362 67-283 (342)
100 3dwl_C Actin-related protein 2 96.8 0.027 9.2E-07 51.6 14.3 182 164-363 33-238 (377)
101 4g56_B MGC81050 protein; prote 96.8 0.023 8E-07 52.1 13.8 186 146-362 150-344 (357)
102 2dg1_A DRP35, lactonase; beta 96.8 0.03 1E-06 50.4 14.3 148 195-361 55-213 (333)
103 4gga_A P55CDC, cell division c 96.7 0.36 1.2E-05 44.9 23.6 188 146-362 115-311 (420)
104 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.05 1.7E-06 49.5 15.9 190 146-360 27-224 (345)
105 1vyh_C Platelet-activating fac 96.7 0.39 1.3E-05 44.7 23.4 184 147-362 162-370 (410)
106 3scy_A Hypothetical bacterial 96.7 0.097 3.3E-06 47.6 17.6 198 148-362 14-243 (361)
107 3odt_A Protein DOA1; ubiquitin 96.7 0.1 3.4E-06 45.9 17.2 187 141-362 108-297 (313)
108 3ei3_B DNA damage-binding prot 96.6 0.19 6.6E-06 45.9 19.3 188 148-362 87-283 (383)
109 3v9f_A Two-component system se 96.6 0.12 4E-06 52.9 19.2 211 101-361 428-656 (781)
110 1vyh_C Platelet-activating fac 96.6 0.2 6.7E-06 46.7 19.3 190 141-362 112-328 (410)
111 2pm7_B Protein transport prote 96.6 0.34 1.2E-05 42.7 22.4 192 146-362 20-239 (297)
112 4gqb_B Methylosome protein 50; 96.6 0.14 4.8E-06 46.6 17.8 189 145-362 91-290 (344)
113 2ynn_A Coatomer subunit beta'; 96.5 0.3 1E-05 43.2 19.4 185 146-362 66-260 (304)
114 2vdu_B TRNA (guanine-N(7)-)-me 96.5 0.28 9.5E-06 46.2 20.1 149 195-362 113-272 (450)
115 1nir_A Nitrite reductase; hemo 96.5 0.52 1.8E-05 45.9 22.4 269 35-361 95-402 (543)
116 3hrp_A Uncharacterized protein 96.5 0.44 1.5E-05 44.5 21.2 181 164-362 152-355 (409)
117 3v9f_A Two-component system se 96.5 0.17 6E-06 51.6 19.8 178 164-362 427-612 (781)
118 2p4o_A Hypothetical protein; p 96.5 0.41 1.4E-05 42.6 21.2 170 165-349 96-277 (306)
119 3p5b_L Low density lipoprotein 96.5 0.27 9.4E-06 45.8 19.5 178 164-362 92-278 (400)
120 1jmx_B Amine dehydrogenase; ox 96.5 0.33 1.1E-05 43.3 19.7 59 299-362 266-326 (349)
121 4gqb_B Methylosome protein 50; 96.5 0.04 1.4E-06 50.4 13.4 173 164-362 149-332 (344)
122 1r5m_A SIR4-interacting protei 96.5 0.16 5.5E-06 46.7 17.8 186 147-362 120-320 (425)
123 2pbi_B Guanine nucleotide-bind 96.5 0.39 1.3E-05 43.7 20.1 147 195-362 165-316 (354)
124 3e5z_A Putative gluconolactona 96.4 0.15 5.3E-06 44.8 16.7 178 164-362 50-247 (296)
125 3sfz_A APAF-1, apoptotic pepti 96.4 0.045 1.5E-06 58.9 15.3 174 164-362 983-1159(1249)
126 1ri6_A Putative isomerase YBHE 96.4 0.15 5.3E-06 45.4 16.7 192 146-360 48-261 (343)
127 2pm9_A Protein WEB1, protein t 96.4 0.31 1.1E-05 44.8 19.3 192 147-363 126-339 (416)
128 3mmy_A MRNA export factor; mRN 96.4 0.51 1.7E-05 42.2 20.6 174 164-362 108-305 (368)
129 4a2l_A BT_4663, two-component 96.4 0.33 1.1E-05 49.6 20.7 211 101-361 428-659 (795)
130 4g56_B MGC81050 protein; prote 96.3 0.59 2E-05 42.5 21.1 189 145-362 103-302 (357)
131 3e5z_A Putative gluconolactona 96.3 0.44 1.5E-05 41.8 19.1 178 164-363 90-288 (296)
132 2pbi_B Guanine nucleotide-bind 96.3 0.26 8.7E-06 44.9 17.8 171 164-358 176-354 (354)
133 2ojh_A Uncharacterized protein 96.3 0.19 6.4E-06 43.5 16.0 190 101-328 63-267 (297)
134 3bg1_A Protein SEC13 homolog; 96.2 0.2 6.8E-06 44.7 16.4 181 164-361 35-247 (316)
135 1sq9_A Antiviral protein SKI8; 96.2 0.53 1.8E-05 42.9 19.7 180 164-362 91-323 (397)
136 3bg1_A Protein SEC13 homolog; 96.2 0.24 8.2E-06 44.2 16.7 204 147-379 71-313 (316)
137 3hrp_A Uncharacterized protein 96.2 0.84 2.9E-05 42.6 23.0 176 165-359 195-408 (409)
138 2ynn_A Coatomer subunit beta'; 96.2 0.35 1.2E-05 42.8 17.6 177 164-362 35-218 (304)
139 2fp8_A Strictosidine synthase; 96.2 0.16 5.5E-06 45.5 15.4 180 165-362 102-314 (322)
140 3no2_A Uncharacterized protein 96.2 0.15 5.2E-06 44.9 14.8 153 195-371 4-163 (276)
141 4a11_B DNA excision repair pro 96.1 0.2 6.7E-06 45.9 16.3 186 147-362 56-277 (408)
142 1sq9_A Antiviral protein SKI8; 96.1 0.34 1.2E-05 44.3 17.9 199 141-362 20-268 (397)
143 2hes_X YDR267CP; beta-propelle 96.1 0.2 6.8E-06 45.0 15.8 179 164-361 129-328 (330)
144 4a2l_A BT_4663, two-component 96.1 0.44 1.5E-05 48.7 20.0 175 164-362 427-615 (795)
145 3mkq_A Coatomer beta'-subunit; 96.1 0.13 4.3E-06 52.5 15.8 177 164-362 35-218 (814)
146 2p4o_A Hypothetical protein; p 96.1 0.45 1.5E-05 42.2 17.8 166 176-361 22-198 (306)
147 3g4e_A Regucalcin; six bladed 96.1 0.15 5.1E-06 45.2 14.4 170 164-349 73-261 (297)
148 2aq5_A Coronin-1A; WD40 repeat 96.0 0.89 3E-05 41.8 24.3 181 164-362 57-255 (402)
149 3m0c_C LDL receptor, low-densi 96.0 0.67 2.3E-05 47.3 20.6 178 164-362 404-590 (791)
150 2hes_X YDR267CP; beta-propelle 96.0 0.75 2.6E-05 41.2 19.2 201 141-361 18-230 (330)
151 3odt_A Protein DOA1; ubiquitin 96.0 0.69 2.4E-05 40.3 19.3 186 145-362 27-215 (313)
152 3fvz_A Peptidyl-glycine alpha- 96.0 0.82 2.8E-05 40.9 22.9 186 164-362 69-278 (329)
153 3lrv_A PRE-mRNA-splicing facto 96.0 0.67 2.3E-05 41.7 18.8 151 195-363 47-203 (343)
154 3k26_A Polycomb protein EED; W 96.0 0.35 1.2E-05 43.4 16.8 179 165-362 45-261 (366)
155 1erj_A Transcriptional repress 95.9 0.5 1.7E-05 43.5 18.0 189 146-362 134-342 (393)
156 3dwl_C Actin-related protein 2 95.9 0.028 9.4E-07 51.5 9.1 149 195-360 22-176 (377)
157 3zwl_B Eukaryotic translation 95.9 0.39 1.3E-05 43.0 16.7 145 195-362 186-347 (369)
158 3i2n_A WD repeat-containing pr 95.9 0.62 2.1E-05 41.6 18.0 179 164-362 44-244 (357)
159 3fm0_A Protein CIAO1; WDR39,SG 95.8 0.15 5E-06 46.3 13.7 152 195-362 27-182 (345)
160 2fp8_A Strictosidine synthase; 95.8 0.5 1.7E-05 42.2 17.1 179 164-362 40-270 (322)
161 2p1m_B Transport inhibitor res 95.8 0.0036 1.2E-07 61.8 2.7 33 32-64 4-40 (594)
162 3sfz_A APAF-1, apoptotic pepti 95.8 0.71 2.4E-05 49.5 20.8 177 164-361 723-913 (1249)
163 3iz6_a 40S ribosomal protein R 95.8 1.1 3.9E-05 40.8 19.7 137 215-362 181-330 (380)
164 3jro_A Fusion protein of prote 95.8 0.074 2.5E-06 54.1 12.4 151 195-362 20-190 (753)
165 1npe_A Nidogen, entactin; glyc 95.7 0.87 3E-05 39.3 19.5 146 195-362 47-199 (267)
166 1pgu_A Actin interacting prote 95.7 0.89 3.1E-05 44.1 19.7 144 196-361 456-614 (615)
167 3lrv_A PRE-mRNA-splicing facto 95.7 1.1 3.9E-05 40.1 22.4 170 164-354 149-336 (343)
168 4h5i_A Guanine nucleotide-exch 95.7 0.69 2.4E-05 42.2 17.6 194 146-362 144-344 (365)
169 4a11_B DNA excision repair pro 95.7 0.8 2.7E-05 41.7 18.2 137 164-321 122-278 (408)
170 1ijq_A LDL receptor, low-densi 95.7 1.1 3.9E-05 40.0 22.1 173 164-362 10-196 (316)
171 1nir_A Nitrite reductase; hemo 95.7 0.24 8.1E-06 48.3 15.1 176 164-362 159-356 (543)
172 2vdu_B TRNA (guanine-N(7)-)-me 95.6 1.5 5E-05 41.1 21.1 168 164-349 171-372 (450)
173 1pjx_A Dfpase, DIISOPROPYLFLUO 95.6 0.23 7.9E-06 43.8 13.9 150 195-360 28-206 (314)
174 4e54_B DNA damage-binding prot 95.6 0.23 7.8E-06 46.6 14.4 188 148-362 133-328 (435)
175 4e54_B DNA damage-binding prot 95.6 0.21 7.3E-06 46.8 14.0 147 195-362 131-283 (435)
176 3i2n_A WD repeat-containing pr 95.6 0.21 7.1E-06 44.8 13.5 178 164-362 139-354 (357)
177 1n7d_A LDL receptor, low-densi 95.5 0.18 6.2E-06 50.8 13.9 172 164-362 386-572 (699)
178 2ad6_A Methanol dehydrogenase 95.5 0.75 2.6E-05 45.1 18.1 121 190-325 57-193 (571)
179 4a0p_A LRP6, LRP-6, low-densit 95.5 1.5 5E-05 43.5 20.2 174 164-361 15-197 (628)
180 1erj_A Transcriptional repress 95.4 0.73 2.5E-05 42.4 17.0 146 195-362 134-288 (393)
181 3ei3_B DNA damage-binding prot 95.4 0.34 1.2E-05 44.2 14.6 144 197-361 87-236 (383)
182 1jmx_B Amine dehydrogenase; ox 95.4 0.13 4.3E-06 46.2 11.4 146 195-362 10-176 (349)
183 4ggc_A P55CDC, cell division c 95.4 1.3 4.4E-05 38.7 23.4 190 144-362 33-231 (318)
184 1pby_B Quinohemoprotein amine 95.3 0.58 2E-05 41.4 15.5 100 164-278 56-166 (337)
185 4a0p_A LRP6, LRP-6, low-densit 95.3 2.6 8.8E-05 41.8 26.7 173 163-362 58-238 (628)
186 2pm7_B Protein transport prote 95.3 0.72 2.5E-05 40.5 15.9 149 195-362 20-190 (297)
187 3sov_A LRP-6, low-density lipo 95.2 1.6 5.5E-05 39.1 24.5 174 163-362 56-239 (318)
188 4aow_A Guanine nucleotide-bind 95.2 1.4 4.8E-05 38.9 17.8 147 195-362 97-247 (340)
189 3ott_A Two-component system se 95.2 0.79 2.7E-05 46.5 17.8 142 195-361 482-626 (758)
190 3hxj_A Pyrrolo-quinoline quino 95.2 0.48 1.6E-05 42.1 14.5 158 166-359 80-242 (330)
191 3mmy_A MRNA export factor; mRN 95.1 1 3.6E-05 40.1 16.8 145 196-363 54-201 (368)
192 2hz6_A Endoplasmic reticulum t 95.1 0.0064 2.2E-07 56.4 1.7 186 142-370 4-200 (369)
193 3pe7_A Oligogalacturonate lyas 95.1 1.9 6.4E-05 39.1 21.7 201 98-329 58-283 (388)
194 1pgu_A Actin interacting prote 95.1 1.9 6.6E-05 41.7 19.7 147 198-362 175-329 (615)
195 3s94_A LRP-6, low-density lipo 95.1 3 0.0001 41.3 23.3 174 163-362 370-552 (619)
196 3tc9_A Hypothetical hydrolase; 95.0 0.19 6.5E-06 47.4 11.8 144 195-361 149-301 (430)
197 4aow_A Guanine nucleotide-bind 95.0 1.4 4.8E-05 38.9 17.1 93 266-362 195-287 (340)
198 2z3z_A Dipeptidyl aminopeptida 95.0 3.2 0.00011 41.3 22.8 185 164-362 235-436 (706)
199 3dm0_A Maltose-binding peripla 94.9 0.74 2.5E-05 46.0 16.5 175 164-362 452-633 (694)
200 3c5m_A Oligogalacturonate lyas 94.9 2.1 7.2E-05 38.7 20.5 136 213-362 167-330 (396)
201 1w6s_A Methanol dehydrogenase 94.9 0.94 3.2E-05 44.6 16.5 121 190-325 57-199 (599)
202 1kv9_A Type II quinohemoprotei 94.7 1.2 4.1E-05 44.5 17.3 118 191-324 62-194 (668)
203 3f3f_A Nucleoporin SEH1; struc 94.7 2 7E-05 37.6 25.1 155 147-319 71-249 (351)
204 1yiq_A Quinohemoprotein alcoho 94.7 1.3 4.6E-05 44.4 17.5 119 191-325 66-200 (689)
205 3ott_A Two-component system se 94.7 4.2 0.00014 41.0 23.0 169 164-361 82-260 (758)
206 1yiq_A Quinohemoprotein alcoho 94.6 4.1 0.00014 40.8 23.0 106 164-281 80-200 (689)
207 2xyi_A Probable histone-bindin 94.6 1.4 4.7E-05 41.1 16.5 105 252-361 243-353 (430)
208 2pm9_A Protein WEB1, protein t 94.6 2.7 9.2E-05 38.3 22.9 184 164-362 45-250 (416)
209 3azo_A Aminopeptidase; POP fam 94.5 4 0.00014 40.2 20.5 187 164-362 161-370 (662)
210 1yfq_A Cell cycle arrest prote 94.4 2.1 7.3E-05 37.7 16.8 147 195-361 22-179 (342)
211 1kb0_A Quinohemoprotein alcoho 94.4 1.6 5.4E-05 43.8 17.1 119 191-325 73-207 (677)
212 3g4e_A Regucalcin; six bladed 94.4 0.57 1.9E-05 41.3 12.6 140 195-360 24-179 (297)
213 2ymu_A WD-40 repeat protein; u 94.3 2.7 9.1E-05 40.5 18.5 141 195-361 396-539 (577)
214 2ghs_A AGR_C_1268P; regucalcin 94.3 1.1 3.9E-05 40.0 14.7 138 195-360 60-209 (326)
215 3gre_A Serine/threonine-protei 94.3 1.5 5.2E-05 40.6 16.0 108 252-362 181-293 (437)
216 2xdw_A Prolyl endopeptidase; a 94.3 4.9 0.00017 40.2 27.3 184 164-363 208-416 (710)
217 3dm0_A Maltose-binding peripla 94.2 4.6 0.00016 40.2 20.2 146 195-362 441-593 (694)
218 1qks_A Cytochrome CD1 nitrite 94.1 1.4 4.9E-05 43.0 15.8 178 163-362 176-374 (567)
219 1qks_A Cytochrome CD1 nitrite 94.1 3.5 0.00012 40.3 18.5 220 100-361 177-421 (567)
220 2xbg_A YCF48-like protein; pho 94.0 3.2 0.00011 37.1 20.2 161 172-357 23-188 (327)
221 3ogk_B Coronatine-insensitive 94.0 0.018 6.2E-07 56.7 2.0 31 35-65 14-48 (592)
222 2ghs_A AGR_C_1268P; regucalcin 94.0 3.2 0.00011 37.0 17.5 164 165-349 110-291 (326)
223 3o4h_A Acylamino-acid-releasin 94.0 1.2 4.2E-05 43.3 15.3 130 217-359 135-274 (582)
224 1pby_B Quinohemoprotein amine 93.9 1.2 4.2E-05 39.1 14.1 133 215-362 12-164 (337)
225 3azo_A Aminopeptidase; POP fam 93.9 3.3 0.00011 40.8 18.4 164 146-326 198-376 (662)
226 4ggc_A P55CDC, cell division c 93.9 2.9 0.0001 36.3 17.5 93 266-362 221-316 (318)
227 3hxj_A Pyrrolo-quinoline quino 93.9 2.7 9.4E-05 36.9 16.4 161 164-360 157-323 (330)
228 3sov_A LRP-6, low-density lipo 93.9 3.3 0.00011 37.0 16.8 146 195-362 46-198 (318)
229 2ece_A 462AA long hypothetical 93.9 4.3 0.00015 38.3 17.7 198 146-361 94-352 (462)
230 3c5m_A Oligogalacturonate lyas 93.9 0.94 3.2E-05 41.1 13.5 181 164-362 168-385 (396)
231 3iz6_a 40S ribosomal protein R 93.9 3.7 0.00013 37.3 20.0 181 164-362 180-376 (380)
232 3frx_A Guanine nucleotide-bind 93.8 3.4 0.00011 36.5 17.6 170 164-360 87-266 (319)
233 2z3z_A Dipeptidyl aminopeptida 93.6 6.2 0.00021 39.1 22.9 142 213-362 234-392 (706)
234 3o4h_A Acylamino-acid-releasin 93.4 2.5 8.6E-05 41.0 16.4 189 143-361 117-315 (582)
235 1nr0_A Actin interacting prote 93.3 4.9 0.00017 39.3 18.4 175 164-362 170-356 (611)
236 1w6s_A Methanol dehydrogenase 93.2 6.9 0.00024 38.4 19.7 106 164-281 73-199 (599)
237 1nr0_A Actin interacting prote 93.2 6.8 0.00023 38.3 19.9 189 146-361 201-397 (611)
238 2ymu_A WD-40 repeat protein; u 93.1 6.4 0.00022 37.7 20.9 169 165-361 326-498 (577)
239 2ad6_A Methanol dehydrogenase 93.1 2.2 7.6E-05 41.7 15.3 116 248-370 58-193 (571)
240 2xbg_A YCF48-like protein; pho 92.9 4.9 0.00017 35.9 23.0 188 166-382 58-257 (327)
241 4hw6_A Hypothetical protein, I 92.9 1.6 5.5E-05 41.0 13.5 142 196-360 153-303 (433)
242 2bkl_A Prolyl endopeptidase; m 92.8 8.4 0.00029 38.3 25.3 239 99-361 93-351 (695)
243 2xyi_A Probable histone-bindin 92.7 6.1 0.00021 36.6 18.4 64 299-362 243-310 (430)
244 2bkl_A Prolyl endopeptidase; m 92.7 8.7 0.0003 38.2 23.2 183 164-362 202-398 (695)
245 2qe8_A Uncharacterized protein 92.6 1.4 4.9E-05 39.7 12.4 59 293-351 252-311 (343)
246 4h5i_A Guanine nucleotide-exch 92.5 4.2 0.00014 36.9 15.5 136 214-362 157-301 (365)
247 3f3f_A Nucleoporin SEH1; struc 92.4 5.2 0.00018 34.8 22.6 186 164-362 33-250 (351)
248 3gre_A Serine/threonine-protei 92.2 4.2 0.00014 37.5 15.4 149 195-362 181-360 (437)
249 3frx_A Guanine nucleotide-bind 92.2 5.7 0.00019 35.0 15.7 144 195-362 76-228 (319)
250 4gga_A P55CDC, cell division c 92.1 2.6 9E-05 38.9 13.9 94 267-362 126-219 (420)
251 3vu4_A KMHSV2; beta-propeller 92.1 6.4 0.00022 35.3 20.8 64 298-363 205-273 (355)
252 2ecf_A Dipeptidyl peptidase IV 92.1 4.4 0.00015 40.5 16.4 58 214-283 129-189 (741)
253 3dr2_A Exported gluconolactona 92.0 3.6 0.00012 36.1 14.0 141 196-361 57-224 (305)
254 3pe7_A Oligogalacturonate lyas 91.8 5.2 0.00018 36.0 15.3 196 99-322 167-387 (388)
255 3dr2_A Exported gluconolactona 91.6 5.3 0.00018 35.0 14.7 175 164-362 67-268 (305)
256 2xzm_R RACK1; ribosome, transl 91.5 7.2 0.00024 34.7 18.3 63 298-362 223-286 (343)
257 2xzm_R RACK1; ribosome, transl 91.5 7.2 0.00025 34.7 25.7 144 195-361 87-244 (343)
258 1kv9_A Type II quinohemoprotei 91.5 3.5 0.00012 41.1 14.7 117 247-370 61-195 (668)
259 1kb0_A Quinohemoprotein alcoho 91.3 3.2 0.00011 41.5 14.1 116 248-370 73-207 (677)
260 3tc9_A Hypothetical hydrolase; 90.9 9.8 0.00034 35.5 16.4 133 164-318 159-300 (430)
261 2ecf_A Dipeptidyl peptidase IV 90.8 14 0.00048 36.8 22.5 104 215-326 264-375 (741)
262 1flg_A Protein (quinoprotein e 90.7 10 0.00036 37.0 16.9 118 191-324 64-200 (582)
263 4hw6_A Hypothetical protein, I 90.5 11 0.00038 35.2 17.8 176 164-359 162-372 (433)
264 3dw8_B Serine/threonine-protei 90.4 7.6 0.00026 35.6 15.2 105 252-361 188-315 (447)
265 2mad_H Methylamine dehydrogena 90.2 11 0.00036 34.5 23.4 62 299-362 278-351 (373)
266 3b7f_A Glycosyl hydrolase, BNR 90.1 10 0.00034 34.7 15.6 185 165-369 32-267 (394)
267 3sjl_D Methylamine dehydrogena 90.1 11 0.00039 34.6 19.4 63 298-362 290-364 (386)
268 2oaj_A Protein SNI1; WD40 repe 89.0 12 0.0004 38.8 16.6 186 147-362 29-243 (902)
269 2hz6_A Endoplasmic reticulum t 88.9 0.25 8.6E-06 45.4 3.5 110 248-370 5-119 (369)
270 3qqz_A Putative uncharacterize 88.3 12 0.0004 32.3 16.1 150 195-363 38-206 (255)
271 1k32_A Tricorn protease; prote 88.2 28 0.00095 36.5 23.9 133 215-362 318-462 (1045)
272 2xdw_A Prolyl endopeptidase; a 87.6 24 0.00082 35.1 19.2 194 163-369 97-328 (710)
273 1qhu_A Protein (hemopexin); be 86.8 21 0.00072 33.6 18.3 115 251-376 268-402 (460)
274 3kya_A Putative phosphatase; s 86.0 8 0.00027 36.9 12.1 150 195-361 151-341 (496)
275 1yr2_A Prolyl oligopeptidase; 86.0 14 0.00046 37.2 14.6 148 163-327 293-449 (741)
276 2mad_H Methylamine dehydrogena 85.9 20 0.00069 32.5 23.2 64 298-362 223-308 (373)
277 2p9w_A MAL S 1 allergenic prot 85.5 20 0.00068 32.2 13.9 144 214-362 35-216 (334)
278 3iuj_A Prolyl endopeptidase; h 85.5 31 0.001 34.3 16.9 150 164-328 259-414 (693)
279 3s94_A LRP-6, low-density lipo 85.3 30 0.001 34.0 26.8 146 195-363 360-512 (619)
280 3c75_H MADH, methylamine dehyd 85.1 24 0.00084 32.8 17.1 63 299-363 330-404 (426)
281 2gop_A Trilobed protease; beta 84.9 19 0.00067 31.5 15.9 210 99-358 42-290 (347)
282 2be1_A Serine/threonine-protei 84.0 2.1 7.1E-05 38.8 6.7 70 298-369 54-137 (339)
283 3ei3_A DNA damage-binding prot 83.6 42 0.0015 35.7 17.5 136 212-361 862-999 (1158)
284 1mda_H Methylamine dehydrogena 83.3 22 0.00075 32.4 13.4 62 299-362 275-347 (368)
285 1itv_A MMP9; adaptive molecula 81.5 20 0.0007 29.3 13.3 63 251-321 108-176 (195)
286 2qe8_A Uncharacterized protein 80.9 30 0.001 30.7 14.0 126 230-362 9-155 (343)
287 1jof_A Carboxy-CIS,CIS-muconat 80.6 15 0.00052 32.9 11.4 68 293-360 149-223 (365)
288 2cn3_A Xyloglucanase, beta-1,4 79.5 29 0.00098 34.9 14.0 209 110-362 512-734 (737)
289 2oaj_A Protein SNI1; WD40 repe 79.0 28 0.00096 35.9 14.0 144 195-362 28-183 (902)
290 3iuj_A Prolyl endopeptidase; h 79.0 53 0.0018 32.5 26.6 137 213-362 258-406 (693)
291 3c75_H MADH, methylamine dehyd 78.7 42 0.0014 31.2 16.8 55 164-225 149-211 (426)
292 3dw8_B Serine/threonine-protei 78.0 40 0.0014 30.6 16.2 27 298-324 352-378 (447)
293 1qhu_A Protein (hemopexin); be 77.0 50 0.0017 31.1 16.6 135 195-361 158-331 (460)
294 3oyo_A Hemopexin fold protein 76.9 20 0.00069 30.1 10.1 61 252-319 127-198 (225)
295 1flg_A Protein (quinoprotein e 76.1 21 0.00072 34.8 11.5 71 298-371 67-145 (582)
296 3vu4_A KMHSV2; beta-propeller 71.2 55 0.0019 29.0 20.6 114 252-369 206-345 (355)
297 3sjl_D Methylamine dehydrogena 71.0 63 0.0022 29.6 18.4 55 164-225 109-171 (386)
298 1fwx_A Nitrous oxide reductase 70.2 83 0.0029 30.6 14.8 190 162-361 110-361 (595)
299 1yr2_A Prolyl oligopeptidase; 69.1 95 0.0033 30.9 23.5 186 163-362 242-442 (741)
300 3lp9_A LS-24; SEED albumin, pl 67.7 35 0.0012 28.6 9.5 62 252-320 129-202 (227)
301 3sre_A PON1, serum paraoxonase 67.5 71 0.0024 28.8 16.3 207 141-360 54-297 (355)
302 3qqz_A Putative uncharacterize 66.2 25 0.00084 30.2 8.4 64 299-363 38-102 (255)
303 1pex_A Collagenase-3, MMP-13; 66.1 55 0.0019 27.0 18.6 62 252-321 127-194 (207)
304 1hxn_A Hemopexin, HPX; heme, b 65.7 58 0.002 27.1 12.5 115 251-376 27-161 (219)
305 2xe4_A Oligopeptidase B; hydro 65.6 1.1E+02 0.0039 30.5 21.3 95 213-317 294-398 (751)
306 1xfd_A DIP, dipeptidyl aminope 64.3 1.1E+02 0.0036 30.0 14.0 67 165-235 38-108 (723)
307 2j04_A TAU60, YPL007P, hypothe 62.4 58 0.002 31.7 10.9 107 252-363 96-213 (588)
308 1jof_A Carboxy-CIS,CIS-muconat 61.3 87 0.003 27.7 14.3 65 298-362 264-342 (365)
309 3oyo_A Hemopexin fold protein 60.7 73 0.0025 26.6 13.6 101 251-360 69-197 (225)
310 2gop_A Trilobed protease; beta 60.6 84 0.0029 27.2 11.8 164 163-358 42-250 (347)
311 3kya_A Putative phosphatase; s 59.9 1.2E+02 0.0041 28.8 15.5 182 164-360 162-409 (496)
312 3c7x_A Matrix metalloproteinas 59.9 69 0.0024 26.0 14.1 62 252-321 109-177 (196)
313 4hvt_A Ritya.17583.B, post-pro 59.2 1.4E+02 0.0049 29.7 13.6 152 164-329 269-439 (711)
314 2ece_A 462AA long hypothetical 59.0 1.2E+02 0.0041 28.5 18.8 32 298-329 330-363 (462)
315 2oiz_A Aromatic amine dehydrog 55.9 73 0.0025 28.4 10.1 59 299-362 265-335 (361)
316 2oit_A Nucleoporin 214KDA; NH2 53.3 1.2E+02 0.0039 28.0 11.3 105 253-362 162-279 (434)
317 1cru_A Protein (soluble quinop 53.0 1.2E+02 0.004 28.4 11.2 139 190-347 31-244 (454)
318 1su3_A Interstitial collagenas 52.7 1.5E+02 0.0051 27.7 15.1 64 252-323 367-436 (450)
319 3a0f_A Xyloglucanase; beta-pro 51.7 2E+02 0.0067 28.9 13.4 94 230-329 167-294 (763)
320 2w18_A PALB2, fancn, partner a 51.7 1.4E+02 0.0047 27.0 21.6 149 195-359 192-355 (356)
321 1su3_A Interstitial collagenas 51.4 1.6E+02 0.0053 27.5 15.4 60 299-362 367-433 (450)
322 1xfd_A DIP, dipeptidyl aminope 50.1 1.9E+02 0.0065 28.2 19.1 105 214-321 228-347 (723)
323 2oit_A Nucleoporin 214KDA; NH2 49.0 29 0.00098 32.2 6.3 59 300-360 162-222 (434)
324 2xe4_A Oligopeptidase B; hydro 48.7 2.2E+02 0.0074 28.4 19.2 181 164-359 201-398 (751)
325 1hxn_A Hemopexin, HPX; heme, b 48.1 1.2E+02 0.004 25.2 13.4 102 248-360 68-196 (219)
326 2p9w_A MAL S 1 allergenic prot 47.5 1.5E+02 0.0053 26.4 22.5 199 147-358 24-261 (334)
327 3amr_A 3-phytase; beta-propell 46.3 1.7E+02 0.0057 26.4 15.4 95 265-360 98-209 (355)
328 1xip_A Nucleoporin NUP159; bet 45.5 1.6E+02 0.0056 26.8 10.7 101 247-362 92-192 (388)
329 1k32_A Tricorn protease; prote 44.6 2.9E+02 0.0098 28.7 25.4 134 214-362 226-369 (1045)
330 1pex_A Collagenase-3, MMP-13; 43.3 1.4E+02 0.0046 24.5 20.5 100 252-362 79-193 (207)
331 1itv_A MMP9; adaptive molecula 42.3 1.4E+02 0.0046 24.2 16.5 100 252-362 64-175 (195)
332 3c7x_A Matrix metalloproteinas 40.8 1.4E+02 0.0049 24.1 15.0 102 251-362 60-176 (196)
333 2oiz_A Aromatic amine dehydrog 38.6 2.1E+02 0.0071 25.3 17.0 71 252-328 265-343 (361)
334 1gen_A Gelatinase A; hydrolase 36.9 1.8E+02 0.006 24.0 15.9 63 251-321 134-204 (218)
335 4gq1_A NUP37; propeller, trans 36.5 60 0.002 29.2 6.3 63 299-362 155-219 (393)
336 2ism_A Putative oxidoreductase 34.3 2.4E+02 0.0083 24.9 10.7 129 195-347 41-219 (352)
337 1z68_A Fibroblast activation p 34.2 3.3E+02 0.011 26.4 14.5 107 252-359 263-391 (719)
338 3ba0_A Macrophage metalloelast 34.2 2.6E+02 0.0089 25.1 17.8 66 252-324 284-355 (365)
339 1tl2_A L10, protein (tachylect 33.3 55 0.0019 27.6 4.8 66 298-367 50-122 (236)
340 1ck7_A Protein (gelatinase A); 33.0 3.2E+02 0.011 26.8 10.9 63 251-320 547-616 (631)
341 1xip_A Nucleoporin NUP159; bet 32.8 2.8E+02 0.0097 25.1 12.6 87 215-322 107-194 (388)
342 2kwv_A RAD30 homolog B, DNA po 32.6 23 0.00079 21.2 1.7 20 29-48 16-35 (48)
343 1mda_H Methylamine dehydrogena 32.2 1.3E+02 0.0045 27.1 7.7 62 299-363 31-107 (368)
344 3b7f_A Glycosyl hydrolase, BNR 30.9 2.9E+02 0.0098 24.6 27.0 194 147-369 128-377 (394)
345 4a5s_A Dipeptidyl peptidase 4 30.2 4E+02 0.014 26.1 17.3 68 164-235 36-109 (740)
346 3ei3_A DNA damage-binding prot 29.9 5.3E+02 0.018 27.4 15.2 146 148-318 845-1000(1158)
347 3ju4_A Endo-N-acetylneuraminid 29.6 3.4E+02 0.012 25.1 15.0 125 174-307 270-405 (670)
348 2j04_A TAU60, YPL007P, hypothe 29.3 1.6E+02 0.0054 28.7 7.9 65 297-362 94-161 (588)
349 1gen_A Gelatinase A; hydrolase 25.3 2.8E+02 0.0097 22.7 17.0 102 252-362 87-203 (218)
350 4gq1_A NUP37; propeller, trans 24.9 1.3E+02 0.0043 27.0 6.3 65 298-362 99-176 (393)
351 2be1_A Serine/threonine-protei 24.5 88 0.003 28.0 4.9 67 302-369 12-83 (339)
352 1fwx_A Nitrous oxide reductase 23.6 1.4E+02 0.0048 29.1 6.4 71 299-370 101-192 (595)
353 2g8s_A Glucose/sorbosone dehyd 21.6 4.1E+02 0.014 23.3 13.4 28 292-319 133-173 (353)
354 3ba0_A Macrophage metalloelast 21.6 4.4E+02 0.015 23.6 13.1 64 195-278 284-353 (365)
355 3amr_A 3-phytase; beta-propell 21.4 4.4E+02 0.015 23.6 18.4 147 163-327 98-270 (355)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=283.80 Aligned_cols=238 Identities=16% Similarity=0.296 Sum_probs=209.0
Q ss_pred eeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecC
Q 016368 100 MEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFG 179 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~ 179 (390)
..+++||+.+++|..++++|. +|.. +.++..++.+|++||.... ...+++++||+.+++|+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~-~r~~--------------~~~~~~~~~lyv~GG~~~~--~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPS-RRCR--------------AGMVYMAGLVFAVGGFNGS--LRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS-CCBS--------------CEEEEETTEEEEESCBCSS--SBCCCEEEEETTTTEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCc-cccc--------------ceEEEECCEEEEEeCcCCC--ccccceEEECCCCCceeeC
Confidence 458999999999999998888 6653 1667778889998887544 5678999999999999999
Q ss_pred CCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEc
Q 016368 180 PQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVN 259 (390)
Q Consensus 180 ~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~g 259 (390)
+++|.+|..|++++++++||++||... ....+++++||+.+++ |+.++++|.++. .+++++++++||++|
T Consensus 93 ~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~~d~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iyv~G 162 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVLNGLLYAVGGFDG---STGLSSVEAYNIKSNE----WFHVAPMNTRRS---SVGVGVVGGLLYAVG 162 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEEEEECS---SCEEEEEEEEETTTTE----EEEECCCSSCCB---SCEEEEETTEEEEEC
T ss_pred CCCCccccceEEEEECCEEEEEcCCCC---CccCceEEEEeCCCCe----EeecCCCCCccc---CceEEEECCEEEEEe
Confidence 999999999999999999999999876 4567899999999999 999999998776 688999999999999
Q ss_pred ccCCC----CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCC-----CcEEEEECCCCceEEcccccc
Q 016368 260 LKGNG----AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGK-----GRLSKYDADHDWWDEVIELAE 330 (390)
Q Consensus 260 g~g~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~-----~~v~~yd~~~~~W~~i~~~p~ 330 (390)
|.... ..+.++||+.+++|+.+++ +|.++..+++++ ++++||++||.+ +++++||+++++|+++..+|.
T Consensus 163 G~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~ 240 (302)
T 2xn4_A 163 GYDVASRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNM 240 (302)
T ss_dssp CEETTTTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSS
T ss_pred CCCCCCCccccEEEEEeCCCCcEEECCC-CccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCC
Confidence 76322 4568899999999999988 889999998887 999999999964 389999999999999999999
Q ss_pred cccceeEEEECCEEEEEeeCC-----ceEEEEEcCCCCCcceEe
Q 016368 331 LKGAEKITAARGRVCAVCENG-----ERIMVVDVLASPARAWLV 369 (390)
Q Consensus 331 ~r~~~~~~~~~g~l~i~g~~~-----~~v~~~d~~~~~~~~W~~ 369 (390)
+|..++++.++++|||+|+.+ .++++||+.+. +|..
T Consensus 241 ~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~ 281 (302)
T 2xn4_A 241 CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD---KWTV 281 (302)
T ss_dssp CCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT---EEEE
T ss_pred ccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC---eEEE
Confidence 999999999999999998642 47999999988 8983
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=286.07 Aligned_cols=250 Identities=14% Similarity=0.233 Sum_probs=217.4
Q ss_pred ccEEEEeecCCCCCCCCCCcccCCCceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEE
Q 016368 74 FSLYALLFNNNKPSHNNNNYYSFNSSMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIA 153 (390)
Q Consensus 74 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 153 (390)
..+|++++.. ....+++||+.+++|..++++|. +|.. +.++.+++.+|++|
T Consensus 12 ~~l~~~GG~~--------------~~~~~~~~d~~~~~W~~~~~~p~-~r~~--------------~~~~~~~~~lyv~G 62 (306)
T 3ii7_A 12 DYRIALFGGS--------------QPQSCRYFNPKDYSWTDIRCPFE-KRRD--------------AACVFWDNVVYILG 62 (306)
T ss_dssp CEEEEEECCS--------------STTSEEEEETTTTEEEECCCCSC-CCBS--------------CEEEEETTEEEEEC
T ss_pred ceEEEEeCCC--------------CCceEEEecCCCCCEecCCCCCc-ccce--------------eEEEEECCEEEEEe
Confidence 5677776644 24568999999999999999988 7754 16777888899888
Q ss_pred eecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEc
Q 016368 154 ATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKK 233 (390)
Q Consensus 154 G~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~ 233 (390)
|.. ....+++++||+.+++|+.++++|.+|..|++++++++||++||.+.. ....+++++||+.+++ |+.+
T Consensus 63 G~~---~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~~~d~~~~~----W~~~ 133 (306)
T 3ii7_A 63 GSQ---LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVG--NSALYLFECYDTRTES----WHTK 133 (306)
T ss_dssp CBS---SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTT--BSCCCCEEEEETTTTE----EEEE
T ss_pred CCC---CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCC--CcEeeeEEEEeCCCCc----eEeC
Confidence 876 267889999999999999999999999999999999999999998732 5577899999999999 9999
Q ss_pred ccCCCCCccccceEEEEECCEEEEEcccCCC------CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeC
Q 016368 234 AQLKDGRFSREAVEAVGFKGNLCMVNLKGNG------AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNE 307 (390)
Q Consensus 234 ~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg 307 (390)
+++|.++. .++++.++++||++||.... ..+.++||+++++|+.+++ ++.++..+++++ ++++||++||
T Consensus 134 ~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~i~v~GG 208 (306)
T 3ii7_A 134 PSMLTQRC---SHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP-MIEARKNHGLVF-VKDKIFAVGG 208 (306)
T ss_dssp CCCSSCCB---SCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTEEEEECC
T ss_pred CCCcCCcc---eeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC-ccchhhcceEEE-ECCEEEEEeC
Confidence 99998876 68899999999999976222 4668899999999999998 889999999998 9999999999
Q ss_pred CC-----CcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeC-----CceEEEEEcCCCCCcceEe
Q 016368 308 GK-----GRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCEN-----GERIMVVDVLASPARAWLV 369 (390)
Q Consensus 308 ~~-----~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~-----~~~v~~~d~~~~~~~~W~~ 369 (390)
.+ .++++||+++++|++++.+|.+|..+++++++++|||+|+. .+++++||+.+. +|..
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~---~W~~ 277 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETD---KWVA 277 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTT---EEEE
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC---eEEe
Confidence 64 38999999999999999999999999999999999999864 358999999988 8983
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=9.7e-37 Score=281.18 Aligned_cols=260 Identities=18% Similarity=0.259 Sum_probs=219.1
Q ss_pred cccEEEEeecCCCCCCCCCCcccCCCceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEE
Q 016368 73 FFSLYALLFNNNKPSHNNNNYYSFNSSMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLI 152 (390)
Q Consensus 73 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (390)
...+|++++.. ......+++||+.+++|..++++|. +|.. +.++..++.+|++
T Consensus 24 ~~~i~v~GG~~------------~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~--------------~~~~~~~~~lyv~ 76 (308)
T 1zgk_A 24 GRLIYTAGGYF------------RQSLSYLEAYNPSNGTWLRLADLQV-PRSG--------------LAGCVVGGLLYAV 76 (308)
T ss_dssp CCCEEEECCBS------------SSBCCCEEEEETTTTEEEECCCCSS-CCBS--------------CEEEEETTEEEEE
T ss_pred CCEEEEEeCcC------------CCCcceEEEEcCCCCeEeECCCCCc-cccc--------------ceEEEECCEEEEE
Confidence 45677776532 1334568999999999999998888 7653 1667778889999
Q ss_pred EeecC--CCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCcccccc
Q 016368 153 AATTP--HFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKW 230 (390)
Q Consensus 153 gG~~~--~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W 230 (390)
||... ......+++++||+.+++|+.++++|.+|..|++++++++||++||... ....+++++||+.+++ |
T Consensus 77 GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~yd~~~~~----W 149 (308)
T 1zgk_A 77 GGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG---CIHHNSVERYEPERDE----W 149 (308)
T ss_dssp CCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEET---TEECCCEEEEETTTTE----E
T ss_pred CCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCC---CcccccEEEECCCCCe----E
Confidence 88731 1114678999999999999999999999999999999999999999876 4567899999999999 9
Q ss_pred EEcccCCCCCccccceEEEEECCEEEEEcccCCC--CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCC
Q 016368 231 EKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNG--AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEG 308 (390)
Q Consensus 231 ~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~--~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~ 308 (390)
+.++++|.++. .+++++++++||++||.... ..+.++||+.+++|+.++. ++.++..+++++ ++++||++||.
T Consensus 150 ~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~iyv~GG~ 224 (308)
T 1zgk_A 150 HLVAPMLTRRI---GVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-MNTIRSGAGVCV-LHNCIYAAGGY 224 (308)
T ss_dssp EECCCCSSCCB---SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEE-ETTEEEEECCB
T ss_pred eECCCCCcccc---ceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-CCCccccceEEE-ECCEEEEEeCC
Confidence 99999998776 68899999999999976322 4668899999999999998 889999999888 99999999996
Q ss_pred C-----CcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeC-----CceEEEEEcCCCCCcceEe--cCCCC
Q 016368 309 K-----GRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCEN-----GERIMVVDVLASPARAWLV--DPPRG 374 (390)
Q Consensus 309 ~-----~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~-----~~~v~~~d~~~~~~~~W~~--~~p~g 374 (390)
+ .++++||+++++|+++..+|.+|..+++++++++|||+|+. .+++++||+.+. +|.. .+|..
T Consensus 225 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~ 299 (308)
T 1zgk_A 225 DGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD---TWSEVTRMTSG 299 (308)
T ss_dssp CSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEECSSC
T ss_pred CCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC---EEeecCCCCCC
Confidence 4 48999999999999999999999999999999999999864 348999999988 8983 35543
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3e-36 Score=276.80 Aligned_cols=238 Identities=18% Similarity=0.347 Sum_probs=209.1
Q ss_pred eeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCc---e
Q 016368 100 MEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNT---W 176 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~---W 176 (390)
..+++||+.+++|..++++|. +|.. +.++..++.+|++||.... ...+++++||+.+++ |
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~-~r~~--------------~~~~~~~~~l~v~GG~~~~--~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITR-KRRY--------------VASVSLHDRIYVIGGYDGR--SRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSS-CCBS--------------CEEEEETTEEEEECCBCSS--CBCCCEEEEETTCCTTCCC
T ss_pred eEEEEEcCCCCeEEeCCCCCh-hhcc--------------ccEEEECCEEEEEcCCCCC--ccCceEEEEECCCCCCCee
Confidence 468999999999999998888 6643 1667778889998887533 567899999999999 9
Q ss_pred ecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEE
Q 016368 177 FFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLC 256 (390)
Q Consensus 177 ~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~ly 256 (390)
+.++++|.+|..|++++++++||++||... ....+++++||+.+++ |+.++++|.++. .+++++++++||
T Consensus 94 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~---~~~~~~~~~~d~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iy 163 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTLGDMIYVSGGFDG---SRRHTSMERYDPNIDQ----WSMLGDMQTARE---GAGLVVASGVIY 163 (301)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCBCS---SCBCCEEEEEETTTTE----EEEEEECSSCCB---SCEEEEETTEEE
T ss_pred EECCCCCCCccceeEEEECCEEEEEcccCC---CcccceEEEEcCCCCe----EEECCCCCCCcc---cceEEEECCEEE
Confidence 999999999999999999999999999876 4467899999999999 999999988776 688999999999
Q ss_pred EEcccCCC--CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCC-----CcEEEEECCCCceEEccccc
Q 016368 257 MVNLKGNG--AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGK-----GRLSKYDADHDWWDEVIELA 329 (390)
Q Consensus 257 v~gg~g~~--~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~-----~~v~~yd~~~~~W~~i~~~p 329 (390)
++||.... ..++++||+.+++|+.+++ +|.++..+++++ ++++||++||.+ .++++||+++++|+++..+|
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p 241 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGHWTNVTP-MATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT 241 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS
T ss_pred EECCCCCCcccceEEEEeCCCCcEEeCCC-CCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC
Confidence 99976322 4568899999999999988 889999999888 999999999964 38999999999999999999
Q ss_pred ccccceeEEEECCEEEEEeeCC-----ceEEEEEcCCCCCcceEe
Q 016368 330 ELKGAEKITAARGRVCAVCENG-----ERIMVVDVLASPARAWLV 369 (390)
Q Consensus 330 ~~r~~~~~~~~~g~l~i~g~~~-----~~v~~~d~~~~~~~~W~~ 369 (390)
.+|..+++++++++|||+|+.+ .++++||+.+. +|..
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~ 283 (301)
T 2vpj_A 242 TPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID---SWEV 283 (301)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT---EEEE
T ss_pred CcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC---eEEE
Confidence 9999999999999999998643 47999999988 8983
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=6.9e-36 Score=276.33 Aligned_cols=242 Identities=16% Similarity=0.224 Sum_probs=203.3
Q ss_pred eEEEEeCCCCCceeCCCCCC-CCCcccccccccccccCCCceEEeecCeEEEEEeec----CCCCCCCCCcEEEeCCCCc
Q 016368 101 EFFCFDPISSTWNPLPAPPQ-NPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATT----PHFLPALASPLAFNPQSNT 175 (390)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~----~~~~~~~~~~~~~dp~t~~ 175 (390)
.+++||+.+++|.. +++|. .+|.. ++++..++.+|++||.. .......+++++||+.+++
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r~~--------------~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 78 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPKNH--------------VSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE 78 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCSSE--------------EEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE
T ss_pred ceEEECCCCCeEec-CCCCCCCCccc--------------eEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe
Confidence 58999999999987 54543 14432 15666778899999862 1111334569999999999
Q ss_pred eecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEE
Q 016368 176 WFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNL 255 (390)
Q Consensus 176 W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~l 255 (390)
|+.++++|.+|..|++++++++||++||..........+++++||+.+++ |+.++++|.++. .++++.++++|
T Consensus 79 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~---~~~~~~~~~~i 151 (315)
T 4asc_A 79 WLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK----WGESDPLPYVVY---GHTVLSHMDLV 151 (315)
T ss_dssp EEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE----EEECCCCSSCCB---SCEEEEETTEE
T ss_pred EEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc----EeECCCCCCccc---ceeEEEECCEE
Confidence 99999999999999999999999999997532224578899999999999 999999998876 68899999999
Q ss_pred EEEcccCCC---CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCC-----cEEEEECCCCceEEccc
Q 016368 256 CMVNLKGNG---AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKG-----RLSKYDADHDWWDEVIE 327 (390)
Q Consensus 256 yv~gg~g~~---~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~-----~v~~yd~~~~~W~~i~~ 327 (390)
|++||...+ ..++++||+.+++|+.+++ +|.+|..+++++ ++++||++||.++ ++++||+++++|+++.+
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKELAP-MQTARSLFGATV-HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEE-ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEECCC-CCCchhceEEEE-ECCEEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 999976222 3568899999999999998 889999999988 9999999999654 79999999999999999
Q ss_pred ccccccceeEEEECCEEEEEeeCC--------------ceEEEEEcCCCCCcceEe
Q 016368 328 LAELKGAEKITAARGRVCAVCENG--------------ERIMVVDVLASPARAWLV 369 (390)
Q Consensus 328 ~p~~r~~~~~~~~~g~l~i~g~~~--------------~~v~~~d~~~~~~~~W~~ 369 (390)
+|.+|..+++++++++|||+|+.. +++++||+.+. +|+.
T Consensus 230 ~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~ 282 (315)
T 4asc_A 230 FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK---KWEG 282 (315)
T ss_dssp CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT---EEEE
T ss_pred CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC---hhhh
Confidence 999999999999999999998642 36899999988 8994
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=6.7e-35 Score=270.06 Aligned_cols=244 Identities=14% Similarity=0.239 Sum_probs=201.5
Q ss_pred eEEEEeCCCCCceeCCCCCC-CCCcccccccccccccCCCceEEeecCeEEEEEeecCC---C-CCCCCCcEEEeCCCCc
Q 016368 101 EFFCFDPISSTWNPLPAPPQ-NPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPH---F-LPALASPLAFNPQSNT 175 (390)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~---~-~~~~~~~~~~dp~t~~ 175 (390)
.+++||+.+++|... +++. .+|.. ++++..++.+|++||.... . ....+++++||+.+++
T Consensus 25 ~~~~yd~~~~~W~~~-~~~~~~~r~~--------------~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 89 (318)
T 2woz_A 25 AAVAYDPMENECYLT-ALAEQIPRNH--------------SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSE 89 (318)
T ss_dssp EEEEEETTTTEEEEE-EECTTSCSSE--------------EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTE
T ss_pred ceEEECCCCCceecc-cCCccCCccc--------------eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCc
Confidence 379999999999984 3332 14432 1566677889999985311 1 1223459999999999
Q ss_pred eecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEE
Q 016368 176 WFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNL 255 (390)
Q Consensus 176 W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~l 255 (390)
|+.++++|.+|..|++++++++||++||.... .....+++++||+.+++ |+.++++|.++. .+++++.+++|
T Consensus 90 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~i 161 (318)
T 2woz_A 90 WVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQ-TEASLDSVLCYDPVAAK----WSEVKNLPIKVY---GHNVISHNGMI 161 (318)
T ss_dssp EEECSCBSSCBCSCEEEEETTEEEEEEEEBTT-TCCEEEEEEEEETTTTE----EEEECCCSSCEE---SCEEEEETTEE
T ss_pred EEECCCCCccccccceEEECCEEEEEcCccCC-CCcccceEEEEeCCCCC----EeECCCCCCccc---ccEEEEECCEE
Confidence 99999999999999999999999999998631 14567899999999999 999999998776 68889999999
Q ss_pred EEEcccCC---CCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCC-----cEEEEECCCCceEEccc
Q 016368 256 CMVNLKGN---GAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKG-----RLSKYDADHDWWDEVIE 327 (390)
Q Consensus 256 yv~gg~g~---~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~-----~v~~yd~~~~~W~~i~~ 327 (390)
|++||... ...++++||+.+++|+.+++ ++.++..+++++ ++++||++||.++ ++++||+++++|+++..
T Consensus 162 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 239 (318)
T 2woz_A 162 YCLGGKTDDKKCTNRVFIYNPKKGDWKDLAP-MKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTE 239 (318)
T ss_dssp EEECCEESSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCC
T ss_pred EEEcCCCCCCCccceEEEEcCCCCEEEECCC-CCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCC
Confidence 99997622 24568999999999999998 889999999888 9999999999543 78999999999999999
Q ss_pred ccccccceeEEEECCEEEEEeeCC--------------ceEEEEEcCCCCCcceEecCC
Q 016368 328 LAELKGAEKITAARGRVCAVCENG--------------ERIMVVDVLASPARAWLVDPP 372 (390)
Q Consensus 328 ~p~~r~~~~~~~~~g~l~i~g~~~--------------~~v~~~d~~~~~~~~W~~~~p 372 (390)
+|.+|..+++++++++|||+|+.. +++++||+.+. +|...+|
T Consensus 240 ~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~ 295 (318)
T 2woz_A 240 FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK---EWAGMLK 295 (318)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT---EEEEEES
T ss_pred CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC---Eehhhcc
Confidence 999999999999999999998642 47999999988 8994333
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=260.62 Aligned_cols=221 Identities=19% Similarity=0.259 Sum_probs=191.9
Q ss_pred eeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecC-CCCCCCCCcEEEeCCCCceec
Q 016368 100 MEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTP-HFLPALASPLAFNPQSNTWFF 178 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~-~~~~~~~~~~~~dp~t~~W~~ 178 (390)
..+++||+.+++|..++++|. +|.. +.++.+++.+|++||... ......+++++||+.+++|+.
T Consensus 67 ~~~~~~d~~~~~W~~~~~~p~-~r~~--------------~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~ 131 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPPLPS-PRCL--------------FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE 131 (315)
T ss_dssp EEEEEEETTTTEEEECCCBSS-CEES--------------CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE
T ss_pred cceEEecCCCCeEEECCCCCc-chhc--------------eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE
Confidence 358999999999999999988 7754 167777889999998753 223678999999999999999
Q ss_pred CCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEE
Q 016368 179 GPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMV 258 (390)
Q Consensus 179 ~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~ 258 (390)
++++|.+|..|++++++++||++||.... ....+++++||+.+++ |+.++++|.++. .+++++++++||++
T Consensus 132 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iyv~ 202 (315)
T 4asc_A 132 SDPLPYVVYGHTVLSHMDLVYVIGGKGSD--RKCLNKMCVYDPKKFE----WKELAPMQTARS---LFGATVHDGRIIVA 202 (315)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCTT--SCBCCCEEEEETTTTE----EEECCCCSSCCB---SCEEEEETTEEEEE
T ss_pred CCCCCCcccceeEEEECCEEEEEeCCCCC--CcccceEEEEeCCCCe----EEECCCCCCchh---ceEEEEECCEEEEE
Confidence 99999999999999999999999998542 5678899999999999 999999998776 68899999999999
Q ss_pred cccCCC--CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCC--------------CcEEEEECCCCce
Q 016368 259 NLKGNG--AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGK--------------GRLSKYDADHDWW 322 (390)
Q Consensus 259 gg~g~~--~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~--------------~~v~~yd~~~~~W 322 (390)
||.... ..++++||+++++|+.+++ +|.++..+++++ ++++||++||.+ .++++||+++++|
T Consensus 203 GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 203 AGVTDTGLTSSAEVYSITDNKWAPFEA-FPQERSSLSLVS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEECSSSEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred eccCCCCccceEEEEECCCCeEEECCC-CCCcccceeEEE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 976432 2467899999999999998 889999999888 999999999963 2689999999999
Q ss_pred EEcccccccccceeEEEECCEEEEEe
Q 016368 323 DEVIELAELKGAEKITAARGRVCAVC 348 (390)
Q Consensus 323 ~~i~~~p~~r~~~~~~~~~g~l~i~g 348 (390)
+++ ++.+|..+++++++++||++.
T Consensus 281 ~~~--~~~~r~~~~~~~~~~~l~v~~ 304 (315)
T 4asc_A 281 EGV--LREIAYAAGATFLPVRLNVLR 304 (315)
T ss_dssp EEE--ESCSSCCSSCEEEEEEECGGG
T ss_pred hhh--ccCCcCccceEEeCCEEEEEE
Confidence 999 566788899999999999984
No 8
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=6.5e-33 Score=260.77 Aligned_cols=245 Identities=13% Similarity=0.154 Sum_probs=192.8
Q ss_pred eEEEEeCC--CCCceeCCCCC-CCCCcccccccccccccCCCceEEeecCeEEEEEee-c--CCCCCCCCCcEEEeCCCC
Q 016368 101 EFFCFDPI--SSTWNPLPAPP-QNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAAT-T--PHFLPALASPLAFNPQSN 174 (390)
Q Consensus 101 ~~~~~d~~--~~~W~~l~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~-~--~~~~~~~~~~~~~dp~t~ 174 (390)
.+++||+. +++|..++++| . +|.. ++++++++.+|++||. . .......+++++||+.++
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~-~R~~--------------~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGG-PRDQ--------------ATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTC-CCBS--------------CEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred eEEEEccccCCCCeeECCCCCCC-cCcc--------------ceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 68999998 49999999998 5 6653 1677788899999987 2 122246789999999999
Q ss_pred ceecCCCCC-CCCcceEEEEECCEEEEEeccCCCC-------------------------------CCCccCeEEEEECC
Q 016368 175 TWFFGPQLS-IPRRWCAMGSVGGVVYVASGVGAHY-------------------------------RGDVARSMKKWDLK 222 (390)
Q Consensus 175 ~W~~~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~~-------------------------------~~~~~~~~~~yd~~ 222 (390)
+|+.+++++ .+|..|++++++++||++||..... .....+++++||+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 999999998 9999999999999999999986420 00245899999999
Q ss_pred CCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCC---CCceeEEEeC--CCCCeEecCCCCCCCCC--CceEE
Q 016368 223 SDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGN---GAKDGAIYNV--ELDKWKEMPEGMHAGWN--GPAAS 295 (390)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~---~~~~~~~yd~--~~~~W~~~~~~~~~~~~--~~~~~ 295 (390)
+++ |+.++++|.++. ..+++++.+++||++||... ...++++||+ ++++|+.++. ++.++. .++++
T Consensus 177 ~~~----W~~~~~~p~~~~--~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~-~~~~~~~~~~~~~ 249 (357)
T 2uvk_A 177 TQQ----WSYAGESPWYGT--AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP-VSSPDGVAGGFAG 249 (357)
T ss_dssp TTE----EEEEEECSSCCC--BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC-SSTTTCCBSCEEE
T ss_pred CCc----EEECCCCCCCCc--ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC-CCCCcccccceEE
Confidence 999 999999886543 14888999999999987521 1345678876 8999999988 655543 55577
Q ss_pred EeeCCeEEEEeCCC----------------------CcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCC--
Q 016368 296 TMNEEELYVVNEGK----------------------GRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENG-- 351 (390)
Q Consensus 296 ~~~~g~lyv~gg~~----------------------~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~-- 351 (390)
+ .+++||++||.. .++++||+++++|+++..+|.+|..++++.++++|||+||.+
T Consensus 250 ~-~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 250 I-SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAG 328 (357)
T ss_dssp E-ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGG
T ss_pred E-ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCC
Confidence 6 999999999942 268999999999999999999999999999999999999642
Q ss_pred ----ceEEEEEcCCCCCcceEecC
Q 016368 352 ----ERIMVVDVLASPARAWLVDP 371 (390)
Q Consensus 352 ----~~v~~~d~~~~~~~~W~~~~ 371 (390)
++++++++.++ +|....
T Consensus 329 ~~~~~~v~~l~~~~~---~~~~~~ 349 (357)
T 2uvk_A 329 GKAVTDSVLITVKDN---KVTVQN 349 (357)
T ss_dssp GCEEEEEEEEEC-CC---SCEEEC
T ss_pred CCEeeeEEEEEEcCc---EeEeee
Confidence 37889999988 787443
No 9
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.5e-33 Score=260.95 Aligned_cols=220 Identities=20% Similarity=0.301 Sum_probs=191.7
Q ss_pred eEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCC
Q 016368 101 EFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGP 180 (390)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~ 180 (390)
.+++||+.+++|..++++|. +|.. +.++++++.+|++||.........+++++||+.+++|+.++
T Consensus 79 ~~~~~d~~~~~W~~~~~~p~-~r~~--------------~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~ 143 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLPS-ARCL--------------FGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK 143 (318)
T ss_dssp EEEEEETTTTEEEECSCBSS-CBCS--------------CEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC
T ss_pred cEEEEeCCCCcEEECCCCCc-cccc--------------cceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC
Confidence 48999999999999999988 7743 16777888999999986433356789999999999999999
Q ss_pred CCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcc
Q 016368 181 QLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNL 260 (390)
Q Consensus 181 ~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg 260 (390)
++|.+|..|++++++++||++||.... ....+++++||+.+++ |+.++++|.++. .+++++++++||++||
T Consensus 144 ~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iyv~GG 214 (318)
T 2woz_A 144 NLPIKVYGHNVISHNGMIYCLGGKTDD--KKCTNRVFIYNPKKGD----WKDLAPMKTPRS---MFGVAIHKGKIVIAGG 214 (318)
T ss_dssp CCSSCEESCEEEEETTEEEEECCEESS--SCBCCCEEEEETTTTE----EEEECCCSSCCB---SCEEEEETTEEEEEEE
T ss_pred CCCCcccccEEEEECCEEEEEcCCCCC--CCccceEEEEcCCCCE----EEECCCCCCCcc---cceEEEECCEEEEEcC
Confidence 999999999999999999999998643 4567899999999999 999999998776 6889999999999997
Q ss_pred cCCC--CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCC--------------CcEEEEECCCCceEE
Q 016368 261 KGNG--AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGK--------------GRLSKYDADHDWWDE 324 (390)
Q Consensus 261 ~g~~--~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~--------------~~v~~yd~~~~~W~~ 324 (390)
.... ..++++||+++++|+.++. +|.++..+++++ ++++||++||.+ .++++||+++++|++
T Consensus 215 ~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 215 VTEDGLSASVEAFDLKTNKWEVMTE-FPQERSSISLVS-LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp EETTEEEEEEEEEETTTCCEEECCC-CSSCCBSCEEEE-ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEE
T ss_pred cCCCCccceEEEEECCCCeEEECCC-CCCcccceEEEE-ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehh
Confidence 6332 2467899999999999998 888999988887 999999999953 379999999999999
Q ss_pred cccccccccceeEEEECCEEEEEe
Q 016368 325 VIELAELKGAEKITAARGRVCAVC 348 (390)
Q Consensus 325 i~~~p~~r~~~~~~~~~g~l~i~g 348 (390)
+ +|..|..+++++++++|||+.
T Consensus 293 ~--~~~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 293 M--LKEIRYASGASCLATRLNLFK 314 (318)
T ss_dssp E--ESCCGGGTTCEEEEEEEEGGG
T ss_pred h--cccccccccceeeCCEEEEEE
Confidence 9 788899999999999999873
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.2e-33 Score=253.71 Aligned_cols=252 Identities=17% Similarity=0.270 Sum_probs=203.7
Q ss_pred HhhhHhHHHhhcCCCCCC-------cccEEEEeecCCCCCCCCCCcccCCCceeEEEEeCCCCCceeCCCCCCCCCcccc
Q 016368 55 FSVCHSWRRLLYSPYFPP-------FFSLYALLFNNNKPSHNNNNYYSFNSSMEFFCFDPISSTWNPLPAPPQNPPLRLL 127 (390)
Q Consensus 55 r~Vck~W~~l~~s~~f~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~~~~~~~ 127 (390)
....++|..+..-|.-.. ...+|++++... ......+++||+.+++|..++++|. +|..
T Consensus 36 d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~-----------~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~-- 101 (302)
T 2xn4_A 36 DFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNG-----------SLRVRTVDSYDPVKDQWTSVANMRD-RRST-- 101 (302)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCS-----------SSBCCCEEEEETTTTEEEEECCCSS-CCBS--
T ss_pred cCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCC-----------CccccceEEECCCCCceeeCCCCCc-cccc--
Confidence 344556776644333111 356777655330 0223468999999999999999988 7653
Q ss_pred cccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCC
Q 016368 128 YRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAH 207 (390)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~ 207 (390)
+.++.+++.+|++||.... ...+++++||+.+++|+.++++|.+|..|++++++++||++||....
T Consensus 102 ------------~~~~~~~~~iyv~GG~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 102 ------------LGAAVLNGLLYAVGGFDGS--TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVA 167 (302)
T ss_dssp ------------CEEEEETTEEEEEEEECSS--CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT
T ss_pred ------------eEEEEECCEEEEEcCCCCC--ccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCC
Confidence 1677778899999997654 45688999999999999999999999999999999999999998653
Q ss_pred CCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCC--CceeEEEeCCCCCeEecCCCC
Q 016368 208 YRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNG--AKDGAIYNVELDKWKEMPEGM 285 (390)
Q Consensus 208 ~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~--~~~~~~yd~~~~~W~~~~~~~ 285 (390)
.....+++++||+.+++ |+.++++|.++. .+++++++++||++||.... ..++++||+++++|+.++. +
T Consensus 168 -~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~ 238 (302)
T 2xn4_A 168 -SRQCLSTVECYNATTNE----WTYIAEMSTRRS---GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD-M 238 (302)
T ss_dssp -TTEECCCEEEEETTTTE----EEEECCCSSCCB---SCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC-C
T ss_pred -CCccccEEEEEeCCCCc----EEECCCCccccc---cccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC-C
Confidence 11357899999999999 999999988776 68899999999999976322 3568899999999999998 8
Q ss_pred CCCCCCceEEEeeCCeEEEEeCCCC-----cEEEEECCCCceEEcc-cccccccceeEEEECCEE
Q 016368 286 HAGWNGPAASTMNEEELYVVNEGKG-----RLSKYDADHDWWDEVI-ELAELKGAEKITAARGRV 344 (390)
Q Consensus 286 ~~~~~~~~~~~~~~g~lyv~gg~~~-----~v~~yd~~~~~W~~i~-~~p~~r~~~~~~~~~g~l 344 (390)
+.++..+++++ ++++||++||.++ ++++||+++++|+.++ .+|.+|..+++++++++|
T Consensus 239 ~~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 239 NMCRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp SSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred CCccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 88898888887 9999999999653 7999999999999997 899999999999998875
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=8.7e-33 Score=254.69 Aligned_cols=254 Identities=16% Similarity=0.264 Sum_probs=204.9
Q ss_pred chhhHhhhHhHHHhhcCCCCCC-------cccEEEEeecCCCCCCCCCCcccCCCceeEEEEeCCCCCceeCCCCCCCCC
Q 016368 51 PALLFSVCHSWRRLLYSPYFPP-------FFSLYALLFNNNKPSHNNNNYYSFNSSMEFFCFDPISSTWNPLPAPPQNPP 123 (390)
Q Consensus 51 l~~~r~Vck~W~~l~~s~~f~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~~~ 123 (390)
+..+....++|..+..-|.-.. ...+|++++..... ........+++||+.+++|..++++|. +|
T Consensus 41 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-------~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r 112 (308)
T 1zgk_A 41 LEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSP-------DGNTDSSALDCYNPMTNQWSPCAPMSV-PR 112 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEET-------TEEEECCCEEEEETTTTEEEECCCCSS-CC
T ss_pred EEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCC-------CCCeecceEEEECCCCCeEeECCCCCc-Cc
Confidence 4445556677887754443211 45667765431000 000122458999999999999999988 76
Q ss_pred cccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEec
Q 016368 124 LRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASG 203 (390)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG 203 (390)
.. +.++.+++.+|++||.... ...+++++||+.+++|+.++++|.+|..|++++++++||++||
T Consensus 113 ~~--------------~~~~~~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 176 (308)
T 1zgk_A 113 NR--------------IGVGVIDGHIYAVGGSHGC--IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGG 176 (308)
T ss_dssp BT--------------CEEEEETTEEEEECCEETT--EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred cc--------------cEEEEECCEEEEEcCCCCC--cccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeC
Confidence 53 1677778899999987654 4578999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCC--CceeEEEeCCCCCeEec
Q 016368 204 VGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNG--AKDGAIYNVELDKWKEM 281 (390)
Q Consensus 204 ~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~--~~~~~~yd~~~~~W~~~ 281 (390)
... ....+++++||+.+++ |+.++++|.++. .+++++++++||++||.... ..++++||+++++|+.+
T Consensus 177 ~~~---~~~~~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 246 (308)
T 1zgk_A 177 FDG---TNRLNSAECYYPERNE----WRMITAMNTIRS---GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFV 246 (308)
T ss_dssp BCS---SCBCCCEEEEETTTTE----EEECCCCSSCCB---SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred CCC---CCcCceEEEEeCCCCe----EeeCCCCCCccc---cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEEC
Confidence 876 3457899999999999 999999998776 68899999999999976322 36689999999999999
Q ss_pred CCCCCCCCCCceEEEeeCCeEEEEeCCCC-----cEEEEECCCCceEEcccccccccceeEEEE
Q 016368 282 PEGMHAGWNGPAASTMNEEELYVVNEGKG-----RLSKYDADHDWWDEVIELAELKGAEKITAA 340 (390)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~g~lyv~gg~~~-----~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~ 340 (390)
+. ++.++..+++++ ++++||++||.++ ++++||+++++|++++.+|.+|..++++++
T Consensus 247 ~~-~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 247 AP-MKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp CC-CSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred CC-CCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 98 889999999888 9999999999543 899999999999999999999998888763
No 12
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=5.8e-33 Score=255.51 Aligned_cols=253 Identities=15% Similarity=0.242 Sum_probs=204.3
Q ss_pred hhHhhhHhHHHhhcCCCCCC-------cccEEEEeecCCCCCCCCCCcccCCCceeEEEEeCCCCCceeCCCCCCCCCcc
Q 016368 53 LLFSVCHSWRRLLYSPYFPP-------FFSLYALLFNNNKPSHNNNNYYSFNSSMEFFCFDPISSTWNPLPAPPQNPPLR 125 (390)
Q Consensus 53 ~~r~Vck~W~~l~~s~~f~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~~~~~ 125 (390)
.+-...++|..+...|.-.. ...+|++++.. ......+++||+.+++|..++++|. +|..
T Consensus 28 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~------------~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~ 94 (306)
T 3ii7_A 28 YFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQ------------LFPIKRMDCYNVVKDSWYSKLGPPT-PRDS 94 (306)
T ss_dssp EEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBS------------SSBCCEEEEEETTTTEEEEEECCSS-CCBS
T ss_pred EecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCC------------CCCcceEEEEeCCCCeEEECCCCCc-cccc
Confidence 33445567777654443111 45567665432 1334578999999999999999887 7654
Q ss_pred cccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccC
Q 016368 126 LLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVG 205 (390)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~ 205 (390)
+.++.+++.+|++||..... ...+++++||+.+++|+.++++|.+|..|++++++++||++||..
T Consensus 95 --------------~~~~~~~~~iyv~GG~~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 95 --------------LAACAAEGKIYTSGGSEVGN-SALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSL 159 (306)
T ss_dssp --------------CEEEEETTEEEEECCBBTTB-SCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEE
T ss_pred --------------eeEEEECCEEEEECCCCCCC-cEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCC
Confidence 16677788999998875332 577899999999999999999999999999999999999999987
Q ss_pred CCCC-CCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCC--CceeEEEeCCCCCeEecC
Q 016368 206 AHYR-GDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNG--AKDGAIYNVELDKWKEMP 282 (390)
Q Consensus 206 ~~~~-~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~--~~~~~~yd~~~~~W~~~~ 282 (390)
.... ....+++++||+.+++ |+.+++++.++. .++++.++++||++||.... ..++++||+++++|+.++
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 232 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATET----WTELCPMIEARK---NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS 232 (306)
T ss_dssp SCTTTCEECCCEEEEETTTTE----EEEECCCSSCCB---SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECC
T ss_pred CCCCcccccceEEEeCCCCCe----EEECCCccchhh---cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECC
Confidence 5310 1127899999999999 999999998776 68899999999999875322 356789999999999999
Q ss_pred CCCCCCCCCceEEEeeCCeEEEEeCCC-----CcEEEEECCCCceEEcccccccccceeEEEECC
Q 016368 283 EGMHAGWNGPAASTMNEEELYVVNEGK-----GRLSKYDADHDWWDEVIELAELKGAEKITAARG 342 (390)
Q Consensus 283 ~~~~~~~~~~~~~~~~~g~lyv~gg~~-----~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g 342 (390)
. +|.++..+++++ ++++||++||.+ .++++||+++++|++++.+|.+|..++++++.+
T Consensus 233 ~-~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 233 P-MPWKGVTVKCAA-VGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVVD 295 (306)
T ss_dssp C-CSCCBSCCEEEE-ETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEEE
T ss_pred C-CCCCccceeEEE-ECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEECC
Confidence 8 889999999988 999999999954 389999999999999999999999888877643
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.1e-32 Score=250.00 Aligned_cols=250 Identities=14% Similarity=0.212 Sum_probs=204.5
Q ss_pred hhhHhhhHhHHHhhcCCCCCC-------cccEEEEeecCCCCCCCCCCcccCCCceeEEEEeCCCCC---ceeCCCCCCC
Q 016368 52 ALLFSVCHSWRRLLYSPYFPP-------FFSLYALLFNNNKPSHNNNNYYSFNSSMEFFCFDPISST---WNPLPAPPQN 121 (390)
Q Consensus 52 ~~~r~Vck~W~~l~~s~~f~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~l~~~p~~ 121 (390)
..+....++|..+...|.-.. ...+|++++.. .......+++||+.+++ |..++++|.
T Consensus 34 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~-----------~~~~~~~~~~~d~~~~~~~~W~~~~~~p~- 101 (301)
T 2vpj_A 34 EKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYD-----------GRSRLSSVECLDYTADEDGVWYSVAPMNV- 101 (301)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC-----------SSCBCCCEEEEETTCCTTCCCEEECCCSS-
T ss_pred EEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCC-----------CCccCceEEEEECCCCCCCeeEECCCCCC-
Confidence 334445667777654443211 45667665432 01233568999999999 999999888
Q ss_pred CCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEE
Q 016368 122 PPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVA 201 (390)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~ 201 (390)
+|.. +.++..++.+|++||.... ...+++++||+.+++|+.++++|.+|..|++++++++||++
T Consensus 102 ~r~~--------------~~~~~~~~~lyv~GG~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~ 165 (301)
T 2vpj_A 102 RRGL--------------AGATTLGDMIYVSGGFDGS--RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCL 165 (301)
T ss_dssp CCBS--------------CEEEEETTEEEEECCBCSS--CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEE
T ss_pred Cccc--------------eeEEEECCEEEEEcccCCC--cccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEE
Confidence 7654 1667778889999887644 45789999999999999999999999999999999999999
Q ss_pred eccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCC--CceeEEEeCCCCCeE
Q 016368 202 SGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNG--AKDGAIYNVELDKWK 279 (390)
Q Consensus 202 GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~--~~~~~~yd~~~~~W~ 279 (390)
||.+. ....+++++||+.+++ |+.++++|.++. .++++.++++||++||.... ..++++||+++++|+
T Consensus 166 GG~~~---~~~~~~~~~~d~~~~~----W~~~~~~p~~r~---~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 166 GGYDG---LNILNSVEKYDPHTGH----WTNVTPMATKRS---GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp CCBCS---SCBCCCEEEEETTTTE----EEEECCCSSCCB---SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCCCC---CcccceEEEEeCCCCc----EEeCCCCCcccc---cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 99876 4467899999999999 999999988776 68899999999999976322 356889999999999
Q ss_pred ecCCCCCCCCCCceEEEeeCCeEEEEeCCCC-----cEEEEECCCCceEEcccccccccceeEEEEC
Q 016368 280 EMPEGMHAGWNGPAASTMNEEELYVVNEGKG-----RLSKYDADHDWWDEVIELAELKGAEKITAAR 341 (390)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~-----~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~ 341 (390)
.++. ++.++..+++++ ++++||++||.++ ++++||+++++|+.+..+|.+|..++++++.
T Consensus 236 ~~~~-~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 236 TVTS-MTTPRCYVGATV-LRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp EECC-CSSCCBSCEEEE-ETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred ECCC-CCCcccceeEEE-ECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 9998 888999888887 9999999999653 7999999999999999999999999888764
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=3e-30 Score=242.60 Aligned_cols=222 Identities=14% Similarity=0.151 Sum_probs=175.1
Q ss_pred eCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCC--CCceecCCCCC-CCCcceE
Q 016368 114 PLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQ--SNTWFFGPQLS-IPRRWCA 190 (390)
Q Consensus 114 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~--t~~W~~~~~~~-~~r~~~~ 190 (390)
.++++|. ++.. ..++.+++.+|++||.. .+++++||+. +++|+.++++| .+|..|+
T Consensus 2 ~l~~lP~-~r~~--------------~~~~~~~~~iyv~GG~~------~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~ 60 (357)
T 2uvk_A 2 VLPETPV-PFKS--------------GTGAIDNDTVYIGLGSA------GTAWYKLDTQAKDKKWTALAAFPGGPRDQAT 60 (357)
T ss_dssp CSCCCSS-CCCS--------------CEEEEETTEEEEECGGG------TTCEEEEETTSSSCCEEECCCCTTCCCBSCE
T ss_pred CCCCCCc-cccc--------------eEEEEECCEEEEEeCcC------CCeEEEEccccCCCCeeECCCCCCCcCccce
Confidence 4677777 6643 15556688888888764 2589999998 49999999999 8999999
Q ss_pred EEEECCEEEEEeccCC--CCCCCccCeEEEEECCCCccccccEEcccCC-CCCccccceEEEEECCEEEEEcccCC----
Q 016368 191 MGSVGGVVYVASGVGA--HYRGDVARSMKKWDLKSDREDWKWEKKAQLK-DGRFSREAVEAVGFKGNLCMVNLKGN---- 263 (390)
Q Consensus 191 ~~~~~~~lyv~GG~~~--~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~-~~~~~r~~~~~~~~~g~lyv~gg~g~---- 263 (390)
+++++++|||+||... .......+++++||+.+++ |+.+++++ .++. .+++++.+++||++||...
T Consensus 61 ~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~----W~~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~ 133 (357)
T 2uvk_A 61 SAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS----WVKLMSHAPMGMA---GHVTFVHNGKAYVTGGVNQNIFN 133 (357)
T ss_dssp EEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE----EEECSCCCSSCCS---SEEEEEETTEEEEEECCCHHHHH
T ss_pred EEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc----EEECCCCCCcccc---cceEEEECCEEEEEeCcCCCcCc
Confidence 9999999999999821 1113567899999999999 99999988 5554 6888889999999997532
Q ss_pred --------------------------------CCceeEEEeCCCCCeEecCCCCCCCCC-CceEEEeeCCeEEEEeCC--
Q 016368 264 --------------------------------GAKDGAIYNVELDKWKEMPEGMHAGWN-GPAASTMNEEELYVVNEG-- 308 (390)
Q Consensus 264 --------------------------------~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~g~lyv~gg~-- 308 (390)
...++++||+.+++|+.+++ +|.++. .+++++ .+++||++||.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~-~~~~iyv~GG~~~ 211 (357)
T 2uvk_A 134 GYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVN-KGDKTWLINGEAK 211 (357)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE-CSSCCCBSCEEEE-ETTEEEEECCEEE
T ss_pred ccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC-CCCCCcccccEEE-ECCEEEEEeeecC
Confidence 13578899999999999987 666554 477777 99999999994
Q ss_pred ----CCcEEEEEC--CCCceEEcccccccc--cceeEEEECCEEEEEeeCC----------------------ceEEEEE
Q 016368 309 ----KGRLSKYDA--DHDWWDEVIELAELK--GAEKITAARGRVCAVCENG----------------------ERIMVVD 358 (390)
Q Consensus 309 ----~~~v~~yd~--~~~~W~~i~~~p~~r--~~~~~~~~~g~l~i~g~~~----------------------~~v~~~d 358 (390)
..+++.||+ ++++|+++..+|.++ ..+++++++++|||+|+.. .++++||
T Consensus 212 ~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd 291 (357)
T 2uvk_A 212 PGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHL 291 (357)
T ss_dssp TTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEE
T ss_pred CCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEe
Confidence 347899986 899999999887664 4667899999999998631 3689999
Q ss_pred cCCCCCcceE
Q 016368 359 VLASPARAWL 368 (390)
Q Consensus 359 ~~~~~~~~W~ 368 (390)
+.+. +|.
T Consensus 292 ~~~~---~W~ 298 (357)
T 2uvk_A 292 WHNG---KWD 298 (357)
T ss_dssp CC------CE
T ss_pred cCCC---cee
Confidence 9987 898
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=7.7e-29 Score=251.93 Aligned_cols=212 Identities=13% Similarity=0.166 Sum_probs=180.4
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCC-C-----CCCCCcceEEEEE--CCEEEEEeccCCCCCCCc
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGP-Q-----LSIPRRWCAMGSV--GGVVYVASGVGAHYRGDV 212 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~-~-----~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~ 212 (390)
+++++++.+|++||... ...+++++||+.+++|+.++ + +|.+|.+|+++++ +++|||+||.... ...
T Consensus 392 ~~~~~~~~iyv~GG~~~---~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~--~~~ 466 (695)
T 2zwa_A 392 DVDVAGNDVFYMGGSNP---YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP--HQG 466 (695)
T ss_dssp EEEECSSCEEEECCBSS---SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST--TCB
T ss_pred EEEEECCEEEEECCCCC---CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC--CCc
Confidence 55557888998888754 46789999999999999987 5 7899999999999 9999999999763 336
Q ss_pred cCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCC--CCCCC
Q 016368 213 ARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEG--MHAGW 289 (390)
Q Consensus 213 ~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~--~~~~~ 289 (390)
.+++++||+.+++ |+.++++|.++. .|+++++ +++||++||..... +.++||+.+++|+.++.. +|.++
T Consensus 467 ~~dv~~yd~~t~~----W~~~~~~p~~R~---~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r 538 (695)
T 2zwa_A 467 LSDNWIFDMKTRE----WSMIKSLSHTRF---RHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNS 538 (695)
T ss_dssp CCCCEEEETTTTE----EEECCCCSBCCB---SCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSC
T ss_pred cccEEEEeCCCCc----EEECCCCCCCcc---cceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCcc
Confidence 7899999999999 999999998877 6888886 99999999774434 899999999999999852 67788
Q ss_pred CCceEEEeeC---CeEEEEeCCC-------CcEEEEECCCCc------eEEcccc-cccccceeEEEEC-CEEEEEeeC-
Q 016368 290 NGPAASTMNE---EELYVVNEGK-------GRLSKYDADHDW------WDEVIEL-AELKGAEKITAAR-GRVCAVCEN- 350 (390)
Q Consensus 290 ~~~~~~~~~~---g~lyv~gg~~-------~~v~~yd~~~~~------W~~i~~~-p~~r~~~~~~~~~-g~l~i~g~~- 350 (390)
.++++++ ++ ++||++||.. +++++||+.+++ |+++..+ +.+|..+++++++ ++|||+||.
T Consensus 539 ~~~~a~v-~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 539 LVSAGLE-FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp CBSCEEE-EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBC
T ss_pred cceeEEE-EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCcc
Confidence 8888665 66 8999999962 379999999999 8999876 4778899999998 999999863
Q ss_pred -------CceEEEEEcCCCCCcceEe
Q 016368 351 -------GERIMVVDVLASPARAWLV 369 (390)
Q Consensus 351 -------~~~v~~~d~~~~~~~~W~~ 369 (390)
.+++++||+.+. .|..
T Consensus 618 ~~~~~~~~~~v~~yd~~t~---~W~~ 640 (695)
T 2zwa_A 618 PSGLFDRTNSIISLDPLSE---TLTS 640 (695)
T ss_dssp SSCCCCTTTSEEEEETTTT---EEEE
T ss_pred CCCCCCCCCeEEEEECCCC---eEEE
Confidence 357999999988 8983
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=1.3e-28 Score=250.16 Aligned_cols=220 Identities=11% Similarity=0.121 Sum_probs=176.9
Q ss_pred eeEEEEeCCCCCceeCC-C-----CCCCCCcccccccccccccCCCceEEee--cCeEEEEEeecCCCCCCCCCcEEEeC
Q 016368 100 MEFFCFDPISSTWNPLP-A-----PPQNPPLRLLYRHPSFLSRKLPVQSLGV--RNNLVLIAATTPHFLPALASPLAFNP 171 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~-~-----~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~~~~dp 171 (390)
..+++||+.+++|..++ + +|. +|.. ++++++ ++.+|++||..... ...+++++||+
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~-~R~~--------------hs~~~~~~~~~lyv~GG~~~~~-~~~~dv~~yd~ 475 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPV-ARMC--------------HTFTTISRNNQLLLIGGRKAPH-QGLSDNWIFDM 475 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCC-CCBS--------------CEEEEETTTTEEEEECCBSSTT-CBCCCCEEEET
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCc-cccc--------------eEEEEEccCCEEEEEcCCCCCC-CccccEEEEeC
Confidence 45899999999999988 5 444 5533 177777 88888888876542 36789999999
Q ss_pred CCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc---CCCCCccccceE
Q 016368 172 QSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ---LKDGRFSREAVE 247 (390)
Q Consensus 172 ~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~---~~~~~~~r~~~~ 247 (390)
.+++|+.++++|.+|..|+++++ +++|||+||.... . ++++||+.+++ |+.++. +|.++. .++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~---~---~v~~yd~~t~~----W~~~~~~g~~p~~r~---~~~ 542 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEG---P---AMLLYNVTEEI----FKDVTPKDEFFQNSL---VSA 542 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSS---C---SEEEEETTTTE----EEECCCSSGGGGSCC---BSC
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCC---C---CEEEEECCCCc----eEEccCCCCCCCccc---cee
Confidence 99999999999999999999997 9999999999763 2 89999999999 999987 666655 677
Q ss_pred EEEEC---CEEEEEcccCCC----CceeEEEeCCCCC------eEecCCCCCCCCCCceEEEeeC-CeEEEEeCCC----
Q 016368 248 AVGFK---GNLCMVNLKGNG----AKDGAIYNVELDK------WKEMPEGMHAGWNGPAASTMNE-EELYVVNEGK---- 309 (390)
Q Consensus 248 ~~~~~---g~lyv~gg~g~~----~~~~~~yd~~~~~------W~~~~~~~~~~~~~~~~~~~~~-g~lyv~gg~~---- 309 (390)
+++++ ++||++||.... ..++++||+.+++ |+.+...++.+|.++++++ ++ ++||++||.+
T Consensus 543 a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~~iyv~GG~~~~~~ 621 (695)
T 2zwa_A 543 GLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY-ITPRKLLIVGGTSPSGL 621 (695)
T ss_dssp EEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE-EETTEEEEECCBCSSCC
T ss_pred EEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE-eCCCEEEEECCccCCCC
Confidence 67777 899999987332 3568899999999 8888763357888888887 88 9999999943
Q ss_pred ----CcEEEEECCCCceEEccccc--------ccccceeEEEECC-EEEEEeeC
Q 016368 310 ----GRLSKYDADHDWWDEVIELA--------ELKGAEKITAARG-RVCAVCEN 350 (390)
Q Consensus 310 ----~~v~~yd~~~~~W~~i~~~p--------~~r~~~~~~~~~g-~l~i~g~~ 350 (390)
.++++||+++++|+.+. +| +.+..|+++++++ +|||+||+
T Consensus 622 ~~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 622 FDRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp CCTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred CCCCCeEEEEECCCCeEEEee-ccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 37999999999999654 32 1345677777765 99999864
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=4e-26 Score=231.32 Aligned_cols=263 Identities=11% Similarity=0.100 Sum_probs=192.1
Q ss_pred hhHhHHHhhcCCCCCC-------cccEEEEeecCCCCCCCCCCcccCCCceeEEEEeCCCCCceeCCCCCCCCCcccccc
Q 016368 57 VCHSWRRLLYSPYFPP-------FFSLYALLFNNNKPSHNNNNYYSFNSSMEFFCFDPISSTWNPLPAPPQNPPLRLLYR 129 (390)
Q Consensus 57 Vck~W~~l~~s~~f~~-------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~ 129 (390)
...+|..+...|.... ..-+|++++....... ........+++||+.+++|..++.++. ++.. ++
T Consensus 174 ~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~-----~~~~~~~~~~~yd~~t~~w~~~~~~~~-~~~~--~~ 245 (656)
T 1k3i_A 174 GLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFG-----GSPGGITLTSSWDPSTGIVSDRTVTVT-KHDM--FC 245 (656)
T ss_dssp TSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTC-----SCCCSEEEEEEECTTTCCBCCCEEEEC-SCCC--SS
T ss_pred CCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccc-----cCCCCeEEEEEEeCCCCcEEeCcccCC-CCCC--cc
Confidence 3457777666665322 2356666654311000 001233468999999999999988776 5432 11
Q ss_pred cccccccCCCceEEe-ecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCC
Q 016368 130 HPSFLSRKLPVQSLG-VRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAH 207 (390)
Q Consensus 130 ~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~ 207 (390)
| .++. .++.+|++||... .++++||+.+++|..+++|+.+|.+|+++++ +++|||+||....
T Consensus 246 ~----------~~~~~~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~ 309 (656)
T 1k3i_A 246 P----------GISMDGNGQIVVTGGNDA------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSG 309 (656)
T ss_dssp C----------EEEECTTSCEEEECSSST------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCS
T ss_pred c----------cccCCCCCCEEEeCCCCC------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccC
Confidence 0 2333 4677888887532 3799999999999999999999999999999 9999999995332
Q ss_pred CCCCccCeEEEEECCCCccccccEEcc-----cCCCCCc-----------------------------------------
Q 016368 208 YRGDVARSMKKWDLKSDREDWKWEKKA-----QLKDGRF----------------------------------------- 241 (390)
Q Consensus 208 ~~~~~~~~~~~yd~~t~~~~~~W~~~~-----~~~~~~~----------------------------------------- 241 (390)
....+++++||+.+++ |+.++ +++..+.
T Consensus 310 --~~~~~~~e~yd~~t~~----W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 310 --GVFEKNGEVYSPSSKT----WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp --SSCCCCEEEEETTTTE----EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEE
T ss_pred --CcccccceEeCCCCCc----ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceee
Confidence 4467899999999999 99973 3332210
Q ss_pred -------------cccceEEEE---ECCEEEEEcccCC-C----Cc---eeEEEeCCCCCeEecC-CCCCCCCCCceEEE
Q 016368 242 -------------SREAVEAVG---FKGNLCMVNLKGN-G----AK---DGAIYNVELDKWKEMP-EGMHAGWNGPAAST 296 (390)
Q Consensus 242 -------------~r~~~~~~~---~~g~lyv~gg~g~-~----~~---~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~ 296 (390)
.+..++++. .+++||++||... . .. .+++||+.+++|+.+. ..++.+|..+++++
T Consensus 384 ~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~ 463 (656)
T 1k3i_A 384 SAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVV 463 (656)
T ss_dssp EEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEE
T ss_pred cCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEE
Confidence 011233332 4899999997521 1 12 5679999999999986 33889998888877
Q ss_pred ee-CCeEEEEeCCC-----------CcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEeeC
Q 016368 297 MN-EEELYVVNEGK-----------GRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCEN 350 (390)
Q Consensus 297 ~~-~g~lyv~gg~~-----------~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~ 350 (390)
+ +|+||++||.+ .++++||+++++|+.+..++.+|..|+++++ +|+|||+|+.
T Consensus 464 -l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 464 -LPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp -CTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred -CCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 6 99999999953 3789999999999999999999999988887 9999999875
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=1.3e-26 Score=234.99 Aligned_cols=234 Identities=10% Similarity=0.105 Sum_probs=179.1
Q ss_pred EEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee--cCeEEEEEeecCCCC----CCCCCcEEEeCCCCc
Q 016368 102 FFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV--RNNLVLIAATTPHFL----PALASPLAFNPQSNT 175 (390)
Q Consensus 102 ~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~----~~~~~~~~~dp~t~~ 175 (390)
+..||+.+++|..++++|. ... +++.+ ++.+|++||...... .....+++||+.+++
T Consensus 168 ~~~~dp~~~~W~~~~~~P~-~~~----------------~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~ 230 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI-VPA----------------AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI 230 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS-CCS----------------EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC
T ss_pred cccCCCCCCeeeeeccCCC-Cce----------------eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc
Confidence 5668999999999887776 221 44444 778888888654211 123478999999999
Q ss_pred eecCCCCCCCCcceE--EEE-ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-
Q 016368 176 WFFGPQLSIPRRWCA--MGS-VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF- 251 (390)
Q Consensus 176 W~~~~~~~~~r~~~~--~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~- 251 (390)
|+.++.++.+|..++ +++ .+++||++||... .++++||+.+++ |+++++|+.+|. .++++++
T Consensus 231 w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-------~~v~~yd~~t~~----W~~~~~~~~~R~---~~s~~~~~ 296 (656)
T 1k3i_A 231 VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDS----WIPGPDMQVARG---YQSSATMS 296 (656)
T ss_dssp BCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-------TCEEEEEGGGTE----EEECCCCSSCCS---SCEEEECT
T ss_pred EEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-------CceEEecCcCCc----eeECCCCCcccc---ccceEEec
Confidence 999999988886654 333 4899999999865 279999999999 999999998876 6888888
Q ss_pred CCEEEEEcccCC---CCceeEEEeCCCCCeEecCC----CCCCCC-----------------------------------
Q 016368 252 KGNLCMVNLKGN---GAKDGAIYNVELDKWKEMPE----GMHAGW----------------------------------- 289 (390)
Q Consensus 252 ~g~lyv~gg~g~---~~~~~~~yd~~~~~W~~~~~----~~~~~~----------------------------------- 289 (390)
+|+||++||... ...+.++||+.+++|+.++. .++..+
T Consensus 297 dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~ 376 (656)
T 1k3i_A 297 DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT 376 (656)
T ss_dssp TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeec
Confidence 999999997422 23678999999999998631 021111
Q ss_pred ---------------------CCceEEE---eeCCeEEEEeCCCC-----------cEEEEECCCCceEEcc--cccccc
Q 016368 290 ---------------------NGPAAST---MNEEELYVVNEGKG-----------RLSKYDADHDWWDEVI--ELAELK 332 (390)
Q Consensus 290 ---------------------~~~~~~~---~~~g~lyv~gg~~~-----------~v~~yd~~~~~W~~i~--~~p~~r 332 (390)
...+.++ ..+++||++||... .+++||++++.|.++. .||..|
T Consensus 377 ~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R 456 (656)
T 1k3i_A 377 SGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFAR 456 (656)
T ss_dssp STTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCC
T ss_pred CCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCc
Confidence 0012222 14899999999532 6889999999999986 899999
Q ss_pred cceeEEEE-CCEEEEEeeCC-----------ceEEEEEcCCCCCcceEe
Q 016368 333 GAEKITAA-RGRVCAVCENG-----------ERIMVVDVLASPARAWLV 369 (390)
Q Consensus 333 ~~~~~~~~-~g~l~i~g~~~-----------~~v~~~d~~~~~~~~W~~ 369 (390)
..++++++ +|+|||+|+.. .++.+||+.+. +|..
T Consensus 457 ~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~---~W~~ 502 (656)
T 1k3i_A 457 TFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD---TFYK 502 (656)
T ss_dssp BSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT---EEEE
T ss_pred ccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC---ceee
Confidence 98988888 99999998642 47899999887 8984
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.17 E-value=1e-08 Score=98.14 Aligned_cols=187 Identities=11% Similarity=0.081 Sum_probs=104.7
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWD 220 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd 220 (390)
.++...+.+++.|+.. ..+.+||..+++-... +........+...++..++.|+.+. .+.+||
T Consensus 163 ~~~~~~~~~l~s~~~d-------g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~dg--------~i~~wd 225 (445)
T 2ovr_B 163 WSSQMRDNIIISGSTD-------RTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRDA--------TLRVWD 225 (445)
T ss_dssp EEEEEETTEEEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETTS--------EEEEEE
T ss_pred EEEEecCCEEEEEeCC-------CeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCCC--------EEEEEE
Confidence 4555567777776542 4688999987753221 1111112223333455566666554 788999
Q ss_pred CCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC
Q 016368 221 LKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE 300 (390)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g 300 (390)
..+.. -...-..... ...++..++..++.|+ ....+.+||..+.+-... +.........+. .++
T Consensus 226 ~~~~~----~~~~~~~~~~-----~v~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~---~~~~~~~v~~~~-~~~ 289 (445)
T 2ovr_B 226 IETGQ----CLHVLMGHVA-----AVRCVQYDGRRVVSGA---YDFMVKVWDPETETCLHT---LQGHTNRVYSLQ-FDG 289 (445)
T ss_dssp SSSCC----EEEEEECCSS-----CEEEEEECSSCEEEEE---TTSCEEEEEGGGTEEEEE---ECCCSSCEEEEE-ECS
T ss_pred CCCCc----EEEEEcCCcc-----cEEEEEECCCEEEEEc---CCCEEEEEECCCCcEeEE---ecCCCCceEEEE-ECC
Confidence 98876 2221111111 1333445777666642 234567888876542211 111111122232 688
Q ss_pred eEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 301 ELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 301 ~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
..++.|+.++.+..||..+.+-. ..+............++..++.|+.++.|.+||+.+.
T Consensus 290 ~~l~~~~~d~~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 290 IHVVSGSLDTSIRVWDVETGNCI--HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp SEEEEEETTSCEEEEETTTCCEE--EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred CEEEEEeCCCeEEEEECCCCCEE--EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCC
Confidence 88899999999999999876532 2222222233334445666677677789999998765
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.14 E-value=8.6e-09 Score=98.55 Aligned_cols=190 Identities=13% Similarity=0.141 Sum_probs=106.7
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWD 220 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd 220 (390)
.++..++.+++.|+.. ..+.+||..+++-... +.............+..++.|+.+. .+.+||
T Consensus 177 ~~l~~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg--------~i~vwd 239 (435)
T 1p22_A 177 LCLQYDERVIITGSSD-------STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDR--------SIAVWD 239 (435)
T ss_dssp EEEECCSSEEEEEETT-------SCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETTS--------CEEEEE
T ss_pred EEEEECCCEEEEEcCC-------CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCCC--------cEEEEe
Confidence 5555667777776542 4688999987754321 1111222233333555666666554 688999
Q ss_pred CCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC
Q 016368 221 LKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE 300 (390)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g 300 (390)
..+... ......+..... ...++..++...+.|+ ....+.+||..+.+-...-. ........+. .++
T Consensus 240 ~~~~~~---~~~~~~~~~~~~---~v~~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~~~~~---~~~~~v~~~~-~~~ 306 (435)
T 1p22_A 240 MASPTD---ITLRRVLVGHRA---AVNVVDFDDKYIVSAS---GDRTIKVWNTSTCEFVRTLN---GHKRGIACLQ-YRD 306 (435)
T ss_dssp CSSSSC---CEEEEEECCCSS---CEEEEEEETTEEEEEE---TTSEEEEEETTTCCEEEEEE---CCSSCEEEEE-EET
T ss_pred CCCCCC---ceeeeEecCCCC---cEEEEEeCCCEEEEEe---CCCeEEEEECCcCcEEEEEc---CCCCcEEEEE-eCC
Confidence 987651 211111111111 1333334666555531 23457789988764322111 1111122233 678
Q ss_pred eEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 301 ELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 301 ~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+++.|+.++.+..||..+..- +..+............++..++.|+.++.|.+||+.+.
T Consensus 307 ~~l~~g~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 307 RLVVSGSSDNTIRLWDIECGAC--LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp TEEEEEETTSCEEEEETTTCCE--EEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCCE--EEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCC
Confidence 8889999999999999987542 22233333334444557888888788889999998543
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.10 E-value=1.7e-08 Score=96.99 Aligned_cols=186 Identities=9% Similarity=0.006 Sum_probs=99.8
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecC-CCCCCCCcceEEEEE---CCEEEEEeccCCCCCCCccCeEEEEEC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFG-PQLSIPRRWCAMGSV---GGVVYVASGVGAHYRGDVARSMKKWDL 221 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~-~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~ 221 (390)
.++.++.|+. -..+.+||..+++-... .....+. .++... ++.+++.|+.+. .+.+||.
T Consensus 172 ~~~~l~s~s~-------dg~i~vwd~~~~~~~~~~~~h~~~v--~~l~~~~~~~~~~l~s~s~d~--------~i~vwd~ 234 (464)
T 3v7d_B 172 HGGILVSGST-------DRTVRVWDIKKGCCTHVFEGHNSTV--RCLDIVEYKNIKYIVTGSRDN--------TLHVWKL 234 (464)
T ss_dssp STTEEEEEET-------TSCEEEEETTTTEEEEEECCCSSCE--EEEEEEESSSCEEEEEEETTS--------CEEEEEC
T ss_pred CCCEEEEEeC-------CCCEEEEECCCCcEEEEECCCCCcc--EEEEEecCCCCCEEEEEcCCC--------cEEEeeC
Confidence 3455555543 24688999988754322 1111111 122222 457777777654 6778888
Q ss_pred CCCccccccEEcc---------------------cCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEe
Q 016368 222 KSDREDWKWEKKA---------------------QLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKE 280 (390)
Q Consensus 222 ~t~~~~~~W~~~~---------------------~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~ 280 (390)
.+.. -.... .+..... ....+..++.+.+.|+ ....+.+||..+.+-..
T Consensus 235 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~l~~~~---~d~~i~vwd~~~~~~~~ 304 (464)
T 3v7d_B 235 PKES----SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA---SVRTVSGHGNIVVSGS---YDNTLIVWDVAQMKCLY 304 (464)
T ss_dssp CCCC----CC------CCSSEEESCGGGCTTEEEEECCCSS---CEEEEEEETTEEEEEE---TTSCEEEEETTTTEEEE
T ss_pred CCCc----ccccccccCCcceEeeccCCCeEEEEEccCccc---eEEEEcCCCCEEEEEe---CCCeEEEEECCCCcEEE
Confidence 7654 11100 0000000 1222234455555532 23457789987664322
Q ss_pred cCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcC
Q 016368 281 MPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~ 360 (390)
.-. . .......++...++..++.|+.++.+..||..+.+ .+..+.............+..++.|+.++.+.+||+.
T Consensus 305 ~~~-~-~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~ 380 (464)
T 3v7d_B 305 ILS-G-HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAN 380 (464)
T ss_dssp EEC-C-CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred Eec-C-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECC
Confidence 111 1 11111223323578888889889999999998754 3333333334444555567777777778899999998
Q ss_pred CC
Q 016368 361 AS 362 (390)
Q Consensus 361 ~~ 362 (390)
+.
T Consensus 381 ~~ 382 (464)
T 3v7d_B 381 DY 382 (464)
T ss_dssp TC
T ss_pred CC
Confidence 75
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.80 E-value=2.4e-09 Score=70.14 Aligned_cols=42 Identities=24% Similarity=0.240 Sum_probs=35.4
Q ss_pred ccCCCCCCcHHHHHHHHhcCC---chhhHhhhHhHHHhhcCCCCC
Q 016368 30 ILLLLPGLPNHLADRCLSSLP---PALLFSVCHSWRRLLYSPYFP 71 (390)
Q Consensus 30 ~~~~~~~LP~dl~~~iL~rLP---l~~~r~Vck~W~~l~~s~~f~ 71 (390)
....+..||+|++.+||++|| +.++++|||+|+.++.++.|.
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 345678999999999999999 889999999999999988754
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.63 E-value=2e-05 Score=72.14 Aligned_cols=222 Identities=10% Similarity=-0.030 Sum_probs=126.9
Q ss_pred ceeEEEEeCCCCCceeCCCC--CCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCce
Q 016368 99 SMEFFCFDPISSTWNPLPAP--PQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTW 176 (390)
Q Consensus 99 ~~~~~~~d~~~~~W~~l~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W 176 (390)
...+.++|+.+++...--.. .. .... ..+...+...+.+|+... ..+.+.++|+.+++-
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~-~~lg-----------~~~~~i~~~~~~lyv~~~-------~~~~v~viD~~t~~~ 76 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANG-FKLG-----------DVAQSMVIRDGIGWIVVN-------NSHVIFAIDINTFKE 76 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHS-SCCB-----------SCEEEEEEETTEEEEEEG-------GGTEEEEEETTTCCE
T ss_pred CceEEEEECCCCEEhhhhHhhhcC-cccC-----------ccceEEEEECCEEEEEEc-------CCCEEEEEECcccEE
Confidence 45689999998876542100 00 0000 000033334555666543 235799999998876
Q ss_pred -ecCCCCCCCCcceEEEE-ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC-ccccceEEEEECC
Q 016368 177 -FFGPQLSIPRRWCAMGS-VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR-FSREAVEAVGFKG 253 (390)
Q Consensus 177 -~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~-~~r~~~~~~~~~g 253 (390)
..++.... -..++. -++++|+....+ ..+.++|+.+++ -...-...... .......++..++
T Consensus 77 ~~~i~~~~~---p~~i~~~~~g~lyv~~~~~--------~~v~~iD~~t~~----~~~~i~~g~~~~~~~~p~~i~~~~~ 141 (328)
T 3dsm_A 77 VGRITGFTS---PRYIHFLSDEKAYVTQIWD--------YRIFIINPKTYE----ITGYIECPDMDMESGSTEQMVQYGK 141 (328)
T ss_dssp EEEEECCSS---EEEEEEEETTEEEEEEBSC--------SEEEEEETTTTE----EEEEEECTTCCTTTCBCCCEEEETT
T ss_pred EEEcCCCCC---CcEEEEeCCCeEEEEECCC--------CeEEEEECCCCe----EEEEEEcCCccccCCCcceEEEECC
Confidence 33432222 233444 578999986432 478999999877 33211112100 0000133445899
Q ss_pred EEEEEcccCCC-CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCC----------CcEEEEECCCCce
Q 016368 254 NLCMVNLKGNG-AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGK----------GRLSKYDADHDWW 322 (390)
Q Consensus 254 ~lyv~gg~g~~-~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~----------~~v~~yd~~~~~W 322 (390)
++|+.. .+ ...+.++|+++++....-. . +.....++...+|++|+..... +.++++|+++.+.
T Consensus 142 ~lyv~~---~~~~~~v~viD~~t~~~~~~i~-~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v 215 (328)
T 3dsm_A 142 YVYVNC---WSYQNRILKIDTETDKVVDELT-I--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV 215 (328)
T ss_dssp EEEEEE---CTTCCEEEEEETTTTEEEEEEE-C--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE
T ss_pred EEEEEc---CCCCCEEEEEECCCCeEEEEEE-c--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeE
Confidence 999983 22 4568899999886543222 1 1111233332679999887643 6899999998876
Q ss_pred EEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCCC
Q 016368 323 DEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 323 ~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
...-.++.......++.. ++.+|+... .++++|+.+..
T Consensus 216 ~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~ 255 (328)
T 3dsm_A 216 EKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADR 255 (328)
T ss_dssp EEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSS
T ss_pred EEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCc
Confidence 543334333344556665 567777633 89999997653
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.57 E-value=1.2e-05 Score=73.72 Aligned_cols=218 Identities=12% Similarity=-0.014 Sum_probs=123.7
Q ss_pred eeEEEEeCCCCCc-eeCCCCCCCCCcccccccccccccCCCceEEe-ecCeEEEEEeecCCCCCCCCCcEEEeCCCCcee
Q 016368 100 MEFFCFDPISSTW-NPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLG-VRNNLVLIAATTPHFLPALASPLAFNPQSNTWF 177 (390)
Q Consensus 100 ~~~~~~d~~~~~W-~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~ 177 (390)
..+.++|+.+.+- ..++.... |+ ..+. .++.+|+.... .+.+.++|+.+++-.
T Consensus 64 ~~v~viD~~t~~~~~~i~~~~~-p~-----------------~i~~~~~g~lyv~~~~-------~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRITGFTS-PR-----------------YIHFLSDEKAYVTQIW-------DYRIFIINPKTYEIT 118 (328)
T ss_dssp TEEEEEETTTCCEEEEEECCSS-EE-----------------EEEEEETTEEEEEEBS-------CSEEEEEETTTTEEE
T ss_pred CEEEEEECcccEEEEEcCCCCC-Cc-----------------EEEEeCCCeEEEEECC-------CCeEEEEECCCCeEE
Confidence 4688899998776 33432222 22 3344 34554444312 367999999998754
Q ss_pred c-CCCCC--C-CCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEE-EEC
Q 016368 178 F-GPQLS--I-PRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAV-GFK 252 (390)
Q Consensus 178 ~-~~~~~--~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~-~~~ 252 (390)
. ++.-. . ...-..++..+++||+..-. ..+.+.++|+.+++ ....-...... ..++ .-+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-------~~~~v~viD~~t~~----~~~~i~~g~~p-----~~i~~~~d 182 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQYGKYVYVNCWS-------YQNRILKIDTETDK----VVDELTIGIQP-----TSLVMDKY 182 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEEETTEEEEEECT-------TCCEEEEEETTTTE----EEEEEECSSCB-----CCCEECTT
T ss_pred EEEEcCCccccCCCcceEEEECCEEEEEcCC-------CCCEEEEEECCCCe----EEEEEEcCCCc-----cceEEcCC
Confidence 2 22111 0 00223444578999998521 12489999999987 44322222111 2222 246
Q ss_pred CEEEEEcccCCC-------CceeEEEeCCCCCeEecCCCCCCCCCCceEEEee-CCeEEEEeCCCCcEEEEECCCCceEE
Q 016368 253 GNLCMVNLKGNG-------AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMN-EEELYVVNEGKGRLSKYDADHDWWDE 324 (390)
Q Consensus 253 g~lyv~gg~g~~-------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~g~lyv~gg~~~~v~~yd~~~~~W~~ 324 (390)
|++|+....... ...+.++|+++.+....-. .+.+.....++... ++.||+..+ .+++||+++.+...
T Consensus 183 G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~-~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~ 258 (328)
T 3dsm_A 183 NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK-FKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPV 258 (328)
T ss_dssp SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE-CCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCS
T ss_pred CCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe-cCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceee
Confidence 899988421100 1467899999887553222 22222223444312 567777765 89999999877543
Q ss_pred cccccc-cccceeEEEE--CCEEEEEe----eCCceEEEEEcCCC
Q 016368 325 VIELAE-LKGAEKITAA--RGRVCAVC----ENGERIMVVDVLAS 362 (390)
Q Consensus 325 i~~~p~-~r~~~~~~~~--~g~l~i~g----~~~~~v~~~d~~~~ 362 (390)
...++. .....++++- +++||+.. ...+.|.+||+..+
T Consensus 259 ~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 259 RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGK 303 (328)
T ss_dssp SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCC
T ss_pred eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCC
Confidence 222222 2344566663 78999986 45678999999843
No 25
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.55 E-value=1.8e-08 Score=89.77 Aligned_cols=44 Identities=27% Similarity=0.369 Sum_probs=39.0
Q ss_pred cccCCCCCCcHHHHHHHHhcCC---ch-hhHhhhHhHHHhhcCCCCCC
Q 016368 29 TILLLLPGLPNHLADRCLSSLP---PA-LLFSVCHSWRRLLYSPYFPP 72 (390)
Q Consensus 29 ~~~~~~~~LP~dl~~~iL~rLP---l~-~~r~Vck~W~~l~~s~~f~~ 72 (390)
+....+..||+||+.+||++|| |. ++++|||+|+.|++++.|..
T Consensus 46 ~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~ 93 (297)
T 2e31_A 46 EAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWL 93 (297)
T ss_dssp -CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHH
T ss_pred ccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHH
Confidence 3456788999999999999999 88 99999999999999998754
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.44 E-value=6.3e-05 Score=65.23 Aligned_cols=159 Identities=18% Similarity=0.227 Sum_probs=107.4
Q ss_pred ceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCce
Q 016368 188 WCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKD 267 (390)
Q Consensus 188 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~ 267 (390)
.++....++.||+..|..+ .+.+.++|++|++ =..--.++...+ +.+++..++++|+.. .....
T Consensus 23 tqGL~~~~~~LyestG~~g------~S~v~~vD~~tgk----v~~~~~l~~~~f---geGi~~~~~~ly~lt---w~~~~ 86 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETG------RSSVRKVDLETGR----ILQRAEVPPPYF---GAGIVAWRDRLIQLT---WRNHE 86 (243)
T ss_dssp EEEEEEETTEEEEEECCTT------SCEEEEEETTTCC----EEEEEECCTTCC---EEEEEEETTEEEEEE---SSSSE
T ss_pred cccEEEECCEEEEECCCCC------CceEEEEECCCCC----EEEEEeCCCCcc---eeEEEEeCCEEEEEE---eeCCE
Confidence 3467777899999998764 3588999999998 444444554444 466788899999993 23566
Q ss_pred eEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEE-cc--ccccc-ccceeEEEECCE
Q 016368 268 GAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDE-VI--ELAEL-KGAEKITAARGR 343 (390)
Q Consensus 268 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~-i~--~~p~~-r~~~~~~~~~g~ 343 (390)
+.+||+++.+-.. . .+.+..+.+++. -+++||+..| ++.++.+|+++.+-.. +. ..+.+ ...-.+...+|+
T Consensus 87 v~v~D~~tl~~~~--t-i~~~~~Gwglt~-dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~ 161 (243)
T 3mbr_X 87 GFVYDLATLTPRA--R-FRYPGEGWALTS-DDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGE 161 (243)
T ss_dssp EEEEETTTTEEEE--E-EECSSCCCEEEE-CSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTE
T ss_pred EEEEECCcCcEEE--E-EeCCCCceEEee-CCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCE
Confidence 8899998754332 2 222234567775 6778999887 7799999999865322 21 11111 122345667999
Q ss_pred EEEEeeCCceEEEEEcCCCCCcce
Q 016368 344 VCAVCENGERIMVVDVLASPARAW 367 (390)
Q Consensus 344 l~i~g~~~~~v~~~d~~~~~~~~W 367 (390)
||+-.-..+.|.++|+.+.....|
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAW 185 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEE
Confidence 998755677999999998754334
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.28 E-value=8.2e-05 Score=65.11 Aligned_cols=158 Identities=15% Similarity=0.141 Sum_probs=103.9
Q ss_pred eEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCcee
Q 016368 189 CAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDG 268 (390)
Q Consensus 189 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~ 268 (390)
.+....++.||+..|..+ ...+.++|++|++ =..--.++...+ +.+++..++++|+.. .....+
T Consensus 46 qGL~~~~~~LyestG~~g------~S~v~~vD~~Tgk----v~~~~~l~~~~F---geGit~~g~~ly~lt---w~~~~v 109 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG------RSSIRKVDIESGK----TLQQIELGKRYF---GEGISDWKDKIVGLT---WKNGLG 109 (262)
T ss_dssp EEEEEETTEEEEEEEETT------EEEEEEECTTTCC----EEEEEECCTTCC---EEEEEEETTEEEEEE---SSSSEE
T ss_pred ceEEEECCEEEEECCCCC------CceEEEEECCCCc----EEEEEecCCccc---eeEEEEeCCEEEEEE---eeCCEE
Confidence 455566899999998764 2478899999988 333333444333 356777899999993 235668
Q ss_pred EEEeCCCCCeEe-cCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEccccc---cc-ccceeEEEECCE
Q 016368 269 AIYNVELDKWKE-MPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELA---EL-KGAEKITAARGR 343 (390)
Q Consensus 269 ~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p---~~-r~~~~~~~~~g~ 343 (390)
.+||+++.+-.. ++. +..+.+++. -++.||+..| ++.++.+|+++.+-..--+.. .+ ..--.+...+|+
T Consensus 110 ~v~D~~t~~~~~ti~~----~~eG~glt~-dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~ 183 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNY----DGEGWGLTH-NDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGE 183 (262)
T ss_dssp EEEETTTCCEEEEEEC----SSCCCCEEE-CSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTE
T ss_pred EEEECccCcEEEEEEC----CCCceEEec-CCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCE
Confidence 899998765432 332 225556775 6778888876 678999999986533221111 11 111135556999
Q ss_pred EEEEeeCCceEEEEEcCCCCCcceE
Q 016368 344 VCAVCENGERIMVVDVLASPARAWL 368 (390)
Q Consensus 344 l~i~g~~~~~v~~~d~~~~~~~~W~ 368 (390)
||+-.-..+.|.++|+.+.....|.
T Consensus 184 lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 184 IFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp EEEEETTSSEEEEECTTTCBEEEEE
T ss_pred EEEEEccCCeEEEEECCCCcEEEEE
Confidence 9987656779999999987543343
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.24 E-value=0.00087 Score=58.03 Aligned_cols=195 Identities=9% Similarity=-0.019 Sum_probs=121.8
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWD 220 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd 220 (390)
+....+++.+|.+.+.. -.+.+.++|+.+++-..--+++..-...+++..+++||+....+ +.+++||
T Consensus 24 qGL~~~~~~LyestG~~----g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~--------~~v~v~D 91 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGET----GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN--------HEGFVYD 91 (243)
T ss_dssp EEEEEETTEEEEEECCT----TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--------SEEEEEE
T ss_pred ccEEEECCEEEEECCCC----CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC--------CEEEEEE
Confidence 44455556666665532 23579999999998766445554445567788899999985443 4899999
Q ss_pred CCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEe-cCCC-CCCCCCCc-eEEEe
Q 016368 221 LKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEG-MHAGWNGP-AASTM 297 (390)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~-~~~~~~~~-~~~~~ 297 (390)
++|.+ .+...+.+.. +.+.+..++++|+.- +.....++|+++.+-.. +... .+.+.... -+..
T Consensus 92 ~~tl~------~~~ti~~~~~---Gwglt~dg~~L~vSd----gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~- 157 (243)
T 3mbr_X 92 LATLT------PRARFRYPGE---GWALTSDDSHLYMSD----GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW- 157 (243)
T ss_dssp TTTTE------EEEEEECSSC---CCEEEECSSCEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-
T ss_pred CCcCc------EEEEEeCCCC---ceEEeeCCCEEEEEC----CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE-
Confidence 98866 3333333322 455665566788773 45668899999865332 2210 11111111 2333
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCc---eEEccccccc-------c--cceeEEEE--CCEEEEEeeCCceEEEEEcCC
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDW---WDEVIELAEL-------K--GAEKITAA--RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~---W~~i~~~p~~-------r--~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~ 361 (390)
.+|+||+--..++.|.+.|+++.+ |-.+..+... . ..-+++.. ++++||.|..-..++-..+..
T Consensus 158 ~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~~ 235 (243)
T 3mbr_X 158 VNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLTP 235 (243)
T ss_dssp ETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEECC
T ss_pred eCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEec
Confidence 699999777677899999999976 3344433211 1 12345554 689999988777777666543
No 29
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.18 E-value=0.00029 Score=61.64 Aligned_cols=189 Identities=8% Similarity=-0.033 Sum_probs=113.9
Q ss_pred ecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 145 VRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 145 ~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
..++.+|.+.+... .+.+.++|+.|++-..--+++..-...+++..+++||+....+ +.+++||++|.
T Consensus 50 ~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~--------~~v~v~D~~t~ 117 (262)
T 3nol_A 50 YRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN--------GLGFVWNIRNL 117 (262)
T ss_dssp EETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--------SEEEEEETTTC
T ss_pred EECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC--------CEEEEEECccC
Confidence 33445555544221 2578899999997655434443334456777899999985543 48999999987
Q ss_pred ccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEe-cCCCCCCCCC--Cc-eEEEeeCC
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGMHAGWN--GP-AASTMNEE 300 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~~~~~~--~~-~~~~~~~g 300 (390)
+ .+...+.+.. +.+.+.-++++|+.. +......+|+++.+-.. ++. -..++. .. .+.. .+|
T Consensus 118 ~------~~~ti~~~~e---G~glt~dg~~L~~Sd----Gs~~i~~iDp~T~~v~~~I~V-~~~g~~~~~lNELe~-~~G 182 (262)
T 3nol_A 118 R------QVRSFNYDGE---GWGLTHNDQYLIMSD----GTPVLRFLDPESLTPVRTITV-TAHGEELPELNELEW-VDG 182 (262)
T ss_dssp C------EEEEEECSSC---CCCEEECSSCEEECC----SSSEEEEECTTTCSEEEEEEC-EETTEECCCEEEEEE-ETT
T ss_pred c------EEEEEECCCC---ceEEecCCCEEEEEC----CCCeEEEEcCCCCeEEEEEEe-ccCCccccccceeEE-ECC
Confidence 7 3333332222 345554455677663 45567899999865332 222 111111 11 2344 699
Q ss_pred eEEEEeCCCCcEEEEECCCCceE---Eccccccc--------ccceeEEEE--CCEEEEEeeCCceEEEEEcC
Q 016368 301 ELYVVNEGKGRLSKYDADHDWWD---EVIELAEL--------KGAEKITAA--RGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 301 ~lyv~gg~~~~v~~yd~~~~~W~---~i~~~p~~--------r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~ 360 (390)
+||+--..++.|.+.|+++.+=. .+..+... -...+++.. ++++||.|..-..++-..+.
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 99987767789999999997643 33323211 112455554 68899998776677665543
No 30
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.12 E-value=0.00078 Score=59.38 Aligned_cols=178 Identities=8% Similarity=-0.127 Sum_probs=110.9
Q ss_pred CCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC-Cc
Q 016368 163 LASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG-RF 241 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~-~~ 241 (390)
.+.+.++|+.|++-...-+++..-...+.+..+++||+..-.+ +.+.+||+.|.+ .+..++.+ ..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~--------~~v~viD~~t~~------v~~~i~~g~~~ 108 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK--------NIGFIYDRRTLS------NIKNFTHQMKD 108 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC--------SEEEEEETTTTE------EEEEEECCSSS
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC--------CEEEEEECCCCc------EEEEEECCCCC
Confidence 3689999999997655333333223446677789999986433 489999998765 33333322 22
Q ss_pred cccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeE-ecCCC-CCCCCCCc-eEEEeeCCeEEEEeCCCCcEEEEECC
Q 016368 242 SREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWK-EMPEG-MHAGWNGP-AASTMNEEELYVVNEGKGRLSKYDAD 318 (390)
Q Consensus 242 ~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~-~~~~~-~~~~~~~~-~~~~~~~g~lyv~gg~~~~v~~yd~~ 318 (390)
+.+.+.-++++|+.. +.....++|+++.+=. .++.. .+.+.... .+.. .+|+||+-...++.+.+.|++
T Consensus 109 ---g~glt~Dg~~l~vs~----gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~-~dg~lyvn~~~~~~V~vID~~ 180 (266)
T 2iwa_A 109 ---GWGLATDGKILYGSD----GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEY-INGEVWANIWQTDCIARISAK 180 (266)
T ss_dssp ---CCEEEECSSSEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEEEEEETTSSEEEEEETT
T ss_pred ---eEEEEECCCEEEEEC----CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEE-ECCEEEEecCCCCeEEEEECC
Confidence 344444456788773 4567889999886532 22221 11111111 3333 589999887777899999999
Q ss_pred CCceEEccccccc------------ccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 319 HDWWDEVIELAEL------------KGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 319 ~~~W~~i~~~p~~------------r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+.+=...-.++.. -...+++.. ++++||.|+....++++|+...
T Consensus 181 tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 181 DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 8753222222110 123456655 5689999888889999998765
No 31
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.08 E-value=0.0014 Score=60.73 Aligned_cols=164 Identities=12% Similarity=0.113 Sum_probs=98.3
Q ss_pred CCcEEEeCCCC--ceecCCCCCCC-----C---cceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEc
Q 016368 164 ASPLAFNPQSN--TWFFGPQLSIP-----R---RWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKK 233 (390)
Q Consensus 164 ~~~~~~dp~t~--~W~~~~~~~~~-----r---~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~ 233 (390)
..+..+|+.++ .|+.-...+.. + .....+..++.||+.+. ...+.++|+.+++. .|+.-
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~---------~g~l~~~d~~tG~~--~w~~~ 266 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY---------NGNLTALDLRSGQI--MWKRE 266 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT---------TSCEEEEETTTCCE--EEEEC
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec---------CcEEEEEECCCCcE--Eeecc
Confidence 46888999877 46543221111 1 12333456888888642 12678999988762 37753
Q ss_pred ccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCC--eEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCc
Q 016368 234 AQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDK--WKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGR 311 (390)
Q Consensus 234 ~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~ 311 (390)
.. . ....+..++.+|+.. ......+||..+++ |+.... ........++ .++.||+.. .++.
T Consensus 267 ~~--~------~~~~~~~~~~l~~~~----~~g~l~~~d~~tG~~~w~~~~~---~~~~~~~~~~-~~~~l~v~~-~~g~ 329 (376)
T 3q7m_A 267 LG--S------VNDFIVDGNRIYLVD----QNDRVMALTIDGGVTLWTQSDL---LHRLLTSPVL-YNGNLVVGD-SEGY 329 (376)
T ss_dssp CC--C------EEEEEEETTEEEEEE----TTCCEEEEETTTCCEEEEECTT---TTSCCCCCEE-ETTEEEEEC-TTSE
T ss_pred CC--C------CCCceEECCEEEEEc----CCCeEEEEECCCCcEEEeeccc---CCCcccCCEE-ECCEEEEEe-CCCe
Confidence 21 1 244566799999985 33457899998774 876422 1122223343 688888654 4678
Q ss_pred EEEEECCCCc--eEEcccccccccceeEEEECCEEEEEeeCCceEEEEE
Q 016368 312 LSKYDADHDW--WDEVIELAELKGAEKITAARGRVCAVCENGERIMVVD 358 (390)
Q Consensus 312 v~~yd~~~~~--W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d 358 (390)
++.||+++.+ |+.- ++........+..++.||+. ..+..++.||
T Consensus 330 l~~~d~~tG~~~~~~~--~~~~~~~~~~~~~~~~l~v~-~~~G~l~~~~ 375 (376)
T 3q7m_A 330 LHWINVEDGRFVAQQK--VDSSGFQTEPVAADGKLLIQ-AKDGTVYSIT 375 (376)
T ss_dssp EEEEETTTCCEEEEEE--CCTTCBCSCCEEETTEEEEE-BTTSCEEEEE
T ss_pred EEEEECCCCcEEEEEe--cCCCcceeCCEEECCEEEEE-eCCCEEEEEe
Confidence 9999998876 5432 21112223355568999987 4455788776
No 32
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.06 E-value=0.00029 Score=61.73 Aligned_cols=153 Identities=10% Similarity=-0.035 Sum_probs=102.7
Q ss_pred eEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCcee
Q 016368 189 CAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDG 268 (390)
Q Consensus 189 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~ 268 (390)
.+....++.||+..|..+ .+.++|++|++. =..+ ++...+ +.+++..++++|+.. .....+
T Consensus 58 qGL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv---~~~~--l~~~~F---geGit~~g~~Ly~lt---w~~~~v 118 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG--------TLRQLSLESAQP---VWME--RLGNIF---AEGLASDGERLYQLT---WTEGLL 118 (268)
T ss_dssp EEEEEETTEEEEEETTTT--------EEEECCSSCSSC---SEEE--ECTTCC---EEEEEECSSCEEEEE---SSSCEE
T ss_pred ceEEEECCEEEEEcCCCC--------EEEEEECCCCcE---EeEE--CCCCcc---eeEEEEeCCEEEEEE---ccCCEE
Confidence 456666899999998865 388999999872 2233 444333 355777899999983 235668
Q ss_pred EEEeCCCCCeE-ecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccc------cceeEEEEC
Q 016368 269 AIYNVELDKWK-EMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELK------GAEKITAAR 341 (390)
Q Consensus 269 ~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r------~~~~~~~~~ 341 (390)
.+||+++.+-. +++. +..+.+++. -+++||+..| ++.++.+|+++.+-. ..++... ..-.+...+
T Consensus 119 ~V~D~~Tl~~~~ti~~----~~eGwGLt~-Dg~~L~vSdG-s~~l~~iDp~T~~v~--~~I~V~~~g~~v~~lNeLe~~d 190 (268)
T 3nok_A 119 FTWSGMPPQRERTTRY----SGEGWGLCY-WNGKLVRSDG-GTMLTFHEPDGFALV--GAVQVKLRGQPVELINELECAN 190 (268)
T ss_dssp EEEETTTTEEEEEEEC----SSCCCCEEE-ETTEEEEECS-SSEEEEECTTTCCEE--EEEECEETTEECCCEEEEEEET
T ss_pred EEEECCcCcEEEEEeC----CCceeEEec-CCCEEEEECC-CCEEEEEcCCCCeEE--EEEEeCCCCcccccccccEEeC
Confidence 89999876433 2332 223456665 6788998886 779999999986533 2222111 112355669
Q ss_pred CEEEEEeeCCceEEEEEcCCCCCcceE
Q 016368 342 GRVCAVCENGERIMVVDVLASPARAWL 368 (390)
Q Consensus 342 g~l~i~g~~~~~v~~~d~~~~~~~~W~ 368 (390)
|+||+-.-..+.|.++|+.+.....|.
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~I 217 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVI 217 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEE
Confidence 999986556779999999987543343
No 33
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.03 E-value=0.0014 Score=60.72 Aligned_cols=182 Identities=15% Similarity=0.162 Sum_probs=104.0
Q ss_pred CCcEEEeCCCC--ceecCCCCC-------CCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcc
Q 016368 164 ASPLAFNPQSN--TWFFGPQLS-------IPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKA 234 (390)
Q Consensus 164 ~~~~~~dp~t~--~W~~~~~~~-------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~ 234 (390)
..++.||+.++ .|+.-.... ........++.++.||+.... ..+.++|.++++. .|+.-.
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~---------g~l~a~d~~tG~~--~W~~~~ 131 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK---------AQVYALNTSDGTV--AWQTKV 131 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT---------SEEEEEETTTCCE--EEEEEC
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC---------CEEEEEECCCCCE--EEEEeC
Confidence 47889999877 465432111 122234455668899985422 3789999988762 376533
Q ss_pred cCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCC--eEecCCCCCCC-CCCceEEEeeCCeEEEEeCCCCc
Q 016368 235 QLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDK--WKEMPEGMHAG-WNGPAASTMNEEELYVVNEGKGR 311 (390)
Q Consensus 235 ~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~--W~~~~~~~~~~-~~~~~~~~~~~g~lyv~gg~~~~ 311 (390)
.-. .. ...+..++.+|+.. .......||..+++ |+......... +.....++ .++.+|+ +..++.
T Consensus 132 ~~~--~~----~~p~~~~~~v~v~~----~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~-~~~~v~~-g~~~g~ 199 (376)
T 3q7m_A 132 AGE--AL----SRPVVSDGLVLIHT----SNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT-AFGAAVV-GGDNGR 199 (376)
T ss_dssp SSC--CC----SCCEEETTEEEEEC----TTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE-ETTEEEE-CCTTTE
T ss_pred CCc--eE----cCCEEECCEEEEEc----CCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE-ECCEEEE-EcCCCE
Confidence 211 11 22345688888864 33457899988764 88654311111 11223343 5776665 555678
Q ss_pred EEEEECCCCc--eEEcccccccc--------cceeEEEECCEEEEEeeCCceEEEEEcCCCCCcceEec
Q 016368 312 LSKYDADHDW--WDEVIELAELK--------GAEKITAARGRVCAVCENGERIMVVDVLASPARAWLVD 370 (390)
Q Consensus 312 v~~yd~~~~~--W~~i~~~p~~r--------~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~~~~~W~~~ 370 (390)
+..||+++.+ |+.-...+... .....+..++.||+. ..+..++.+|..+.. ..|...
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~-~~~g~l~~~d~~tG~-~~w~~~ 266 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFAL-AYNGNLTALDLRSGQ-IMWKRE 266 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEE-CTTSCEEEEETTTCC-EEEEEC
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEE-ecCcEEEEEECCCCc-EEeecc
Confidence 9999987654 76543222110 112344557888876 345578888886553 247754
No 34
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.03 E-value=0.00058 Score=60.23 Aligned_cols=159 Identities=15% Similarity=0.114 Sum_probs=99.9
Q ss_pred eEEEEEC-CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCce
Q 016368 189 CAMGSVG-GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKD 267 (390)
Q Consensus 189 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~ 267 (390)
++++..+ +.||+..|... .+.+.++|+.|++ =...-+++...+ +.+.+..++++|+. ......
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~----v~~~i~l~~~~f---geGi~~~g~~lyv~---t~~~~~ 87 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG------RSSVRQVALQTGK----VENIHKMDDSYF---GEGLTLLNEKLYQV---VWLKNI 87 (266)
T ss_dssp EEEEECSTTEEEEEECSTT------TCEEEEEETTTCC----EEEEEECCTTCC---EEEEEEETTEEEEE---ETTCSE
T ss_pred ccEEEeCCCeEEEECCCCC------CCEEEEEECCCCC----EEEEEecCCCcc---eEEEEEeCCEEEEE---EecCCE
Confidence 4555555 89999887532 2589999999988 333222333323 35667778899999 334567
Q ss_pred eEEEeCCCCCe-EecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceE-Ecc--ccccc-ccceeEEEECC
Q 016368 268 GAIYNVELDKW-KEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWD-EVI--ELAEL-KGAEKITAARG 342 (390)
Q Consensus 268 ~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~-~i~--~~p~~-r~~~~~~~~~g 342 (390)
+.+||+++.+= .+++..+ ..+.+++. -++++|+..| ++.+.++|+++.+=. .+. ..+.+ .....+...+|
T Consensus 88 v~viD~~t~~v~~~i~~g~---~~g~glt~-Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg 162 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQM---KDGWGLAT-DGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYING 162 (266)
T ss_dssp EEEEETTTTEEEEEEECCS---SSCCEEEE-CSSSEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred EEEEECCCCcEEEEEECCC---CCeEEEEE-CCCEEEEECC-CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECC
Confidence 88999986532 2232211 23445554 5677888775 779999999886532 222 11111 12234555589
Q ss_pred EEEEEeeCCceEEEEEcCCCCCcceE
Q 016368 343 RVCAVCENGERIMVVDVLASPARAWL 368 (390)
Q Consensus 343 ~l~i~g~~~~~v~~~d~~~~~~~~W~ 368 (390)
+||+-....+.|.++|+.+.....|.
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEE
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEE
Confidence 99987666789999999987543343
No 35
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.93 E-value=0.0019 Score=56.38 Aligned_cols=176 Identities=13% Similarity=0.025 Sum_probs=100.2
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
+.+.+||+.++....+..... ..-.+++.. +++||+..... ..+.+||..+.. .......... .
T Consensus 87 ~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~--------~~i~~~~~~~~~----~~~~~~~~~~-~- 151 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQGAVYVADRGN--------NRVVKLAAGSKT----QTVLPFTGLN-D- 151 (270)
T ss_dssp TEEEEECTTCSCCEECCCCSC-SSEEEEEECTTCCEEEEEGGG--------TEEEEECTTCCS----CEECCCCSCC-S-
T ss_pred CEEEEEeCCCceEeeeecCCc-CCCcceEECCCCCEEEEECCC--------CEEEEEECCCce----eEeeccccCC-C-
Confidence 478899998776544432111 112233333 67899875432 367888877665 4333221111 1
Q ss_pred ccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc
Q 016368 243 REAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 243 r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
..+++.. +|++|+.. .+...+.+||+.+..-..... ... .....++...+|.||+....++.+.+||+.+..
T Consensus 152 --p~~i~~~~~g~l~v~~---~~~~~i~~~~~~~~~~~~~~~-~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 152 --PDGVAVDNSGNVYVTD---TDNNRVVKLEAESNNQVVLPF-TDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp --CCCEEECTTCCEEEEE---GGGTEEEEECTTTCCEEECCC-SSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred --ceeEEEeCCCCEEEEE---CCCCEEEEEecCCCceEeecc-cCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 1334433 68899873 123457789988765443322 111 111234432467999988777899999998654
Q ss_pred eEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 322 WDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 322 W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
-..... .......+++.. +|.||+....++.|.+++...+
T Consensus 225 ~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 225 STVLPF-TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CEECCC-CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred ceeecc-CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 333221 111233455554 6789998777779999987765
No 36
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.92 E-value=0.0042 Score=54.83 Aligned_cols=172 Identities=8% Similarity=-0.040 Sum_probs=96.2
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
..+++||+. ++.+..........-.+++.. +++||+..... ..+.+||+ ++. ............
T Consensus 78 ~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~d~-~g~----~~~~~~~~~~~~- 142 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNG--------NRIGRITD-DGK----IREYELPNKGSY- 142 (299)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTT--------TEEEEECT-TCC----EEEEECSSTTCC-
T ss_pred CeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecCC--------ceEEEECC-CCC----EEEecCCCCCCC-
Confidence 468889986 444433211111122333333 57888875432 36888998 555 444322111111
Q ss_pred ccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc
Q 016368 243 REAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 243 r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
..+++.. +|++|+.. .....+.+||+ +++...... .........++...+|.||+.....+.+.+||+ +..
T Consensus 143 --~~~i~~~~~g~l~v~~---~~~~~i~~~~~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 143 --PSFITLGSDNALWFTE---NQNNAIGRITE-SGDITEFKI-PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp --EEEEEECTTSCEEEEE---TTTTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred --CceEEEcCCCCEEEEe---CCCCEEEEEcC-CCcEEEeeC-CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 2334433 67899873 12356778998 777665422 111111123343246889988876779999999 677
Q ss_pred eEEccccc-ccccceeEEEE-CCEEEEEeeCCceEEEEEc
Q 016368 322 WDEVIELA-ELKGAEKITAA-RGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 322 W~~i~~~p-~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~ 359 (390)
...+. ++ ......+++.. +|.||+.....+.+..+|+
T Consensus 215 ~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 215 ITEFK-IPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEEE-CSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred EEEEE-CCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 66542 22 12233445444 6788887545678999997
No 37
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.92 E-value=0.0091 Score=54.06 Aligned_cols=219 Identities=9% Similarity=-0.002 Sum_probs=114.0
Q ss_pred ceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceec
Q 016368 99 SMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFF 178 (390)
Q Consensus 99 ~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~ 178 (390)
...++++|+.+++....-+....+. . ..+.-+++.+++.+. ..+.+.+||+.+++-..
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~~~~-~---------------~~~s~dg~~l~v~~~------~~~~v~~~d~~~~~~~~ 125 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDLKPF-G---------------ATINNTTQTLWFGNT------VNSAVTAIDAKTGEVKG 125 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCC-S---------------EEEETTTTEEEEEET------TTTEEEEEETTTCCEEE
T ss_pred CccEEEEcCCCCeEEEEEecCCCcc-e---------------EEECCCCCEEEEEec------CCCEEEEEeCCCCeeEE
Confidence 3468899998876543222222111 0 223334454444432 22479999999886532
Q ss_pred CCCCCC--------CCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccE-EcccCCCCCccccceE
Q 016368 179 GPQLSI--------PRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWE-KKAQLKDGRFSREAVE 247 (390)
Q Consensus 179 ~~~~~~--------~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~-~~~~~~~~~~~r~~~~ 247 (390)
.-+... +..-.+++.. ++.+|+.+.... ..+.+||+.+.+ -. .++...... ..
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-------~~i~~~d~~~~~----~~~~~~~~~~~~-----~~ 189 (353)
T 3vgz_A 126 RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE-------SVIWVVDGGNIK----LKTAIQNTGKMS-----TG 189 (353)
T ss_dssp EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-------CEEEEEETTTTE----EEEEECCCCTTC-----CC
T ss_pred EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-------ceEEEEcCCCCc----eEEEecCCCCcc-----ce
Confidence 211111 1112233333 456777763322 378999998776 22 222111111 22
Q ss_pred EEE-ECC-EEEEEcccCCCCceeEEEeCCCCCeEecCCCCCC-CCCC-ceEEEeeCC-eEEEEeCCCCcEEEEECCCCce
Q 016368 248 AVG-FKG-NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHA-GWNG-PAASTMNEE-ELYVVNEGKGRLSKYDADHDWW 322 (390)
Q Consensus 248 ~~~-~~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~-~~~~-~~~~~~~~g-~lyv~gg~~~~v~~yd~~~~~W 322 (390)
++. -+| .+|+.. ....+.+||+.+.+-......... +... ..++...+| .+|+....++.+.+||..+.+.
T Consensus 190 ~~~s~dg~~l~~~~----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 190 LALDSEGKRLYTTN----ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp CEEETTTTEEEEEC----TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE
T ss_pred EEECCCCCEEEEEc----CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 222 244 577663 234677899987753322110111 1111 123332344 5777776668999999988765
Q ss_pred EEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 323 DEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 323 ~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
......+.+ ..+... ++.+|+....++.+.++|+.+.
T Consensus 266 ~~~~~~~~~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 266 LAKVAAPES---LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EEEEECSSC---CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEcCCC---ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 443333332 233333 4458887666779999998765
No 38
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.88 E-value=0.0018 Score=56.73 Aligned_cols=189 Identities=10% Similarity=-0.025 Sum_probs=113.5
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWD 220 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd 220 (390)
+.....++.+|++.+.. ..+.++|+.|++-..-- ++..-...+++..+++||+....+ +.+++||
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~--------~~v~V~D 122 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE--------GLLFTWS 122 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS--------CEEEEEE
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC--------CEEEEEE
Confidence 34445566666655422 23889999998764422 443333455777789999985443 4899999
Q ss_pred CCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEe-cCCC-CCCCCCC-ceEEEe
Q 016368 221 LKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEG-MHAGWNG-PAASTM 297 (390)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~-~~~~~~~-~~~~~~ 297 (390)
++|.+ .+...+.... +.+.+.-++++|+.. +......+|+++.+-.. +... .+.+... -.+..
T Consensus 123 ~~Tl~------~~~ti~~~~e---GwGLt~Dg~~L~vSd----Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~- 188 (268)
T 3nok_A 123 GMPPQ------RERTTRYSGE---GWGLCYWNGKLVRSD----GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELEC- 188 (268)
T ss_dssp TTTTE------EEEEEECSSC---CCCEEEETTEEEEEC----SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-
T ss_pred CCcCc------EEEEEeCCCc---eeEEecCCCEEEEEC----CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEE-
Confidence 99876 3333332222 355666677888873 45668899999865332 2220 1111111 12333
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCce---EEcccccc------c-c--cceeEEEE--CCEEEEEeeCCceEEEEE
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDWW---DEVIELAE------L-K--GAEKITAA--RGRVCAVCENGERIMVVD 358 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~W---~~i~~~p~------~-r--~~~~~~~~--~g~l~i~g~~~~~v~~~d 358 (390)
.+|+||+--..++.|.+.|+++.+= -.+..+.. . . ..-+++.. ++++||.|..-..++-..
T Consensus 189 ~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 189 ANGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp ETTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred eCCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 6899997766677999999999763 33332211 0 1 12345554 678999887766665544
No 39
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.88 E-value=0.0014 Score=62.00 Aligned_cols=190 Identities=10% Similarity=0.084 Sum_probs=109.3
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWD 220 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd 220 (390)
.++..++..++.|+.. +.+.+||..+.+-... +........+...++.+++.|+.++ .+.+||
T Consensus 137 ~~~~~d~~~l~~g~~d-------g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~dg--------~i~vwd 199 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRD-------NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSDS--------TVRVWD 199 (435)
T ss_dssp EEEECCSSEEEEEESS-------SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS--------CEEEEE
T ss_pred EEEEECCCEEEEEeCC-------CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCCC--------eEEEEE
Confidence 5566677777776542 4688999887654322 1111222233344777788887765 788999
Q ss_pred CCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC
Q 016368 221 LKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE 300 (390)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g 300 (390)
..++. -...-..... ....+.+++..++.|+ ....+.+||..+..-..... ...+......++..++
T Consensus 200 ~~~~~----~~~~~~~h~~-----~v~~l~~~~~~l~s~s---~dg~i~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~ 266 (435)
T 1p22_A 200 VNTGE----MLNTLIHHCE-----AVLHLRFNNGMMVTCS---KDRSIAVWDMASPTDITLRR-VLVGHRAAVNVVDFDD 266 (435)
T ss_dssp SSSCC----EEEEECCCCS-----CEEEEECCTTEEEEEE---TTSCEEEEECSSSSCCEEEE-EECCCSSCEEEEEEET
T ss_pred CCCCc----EEEEEcCCCC-----cEEEEEEcCCEEEEee---CCCcEEEEeCCCCCCceeee-EecCCCCcEEEEEeCC
Confidence 98876 3222111111 1333334555555532 23457789987654221111 1111122222222688
Q ss_pred eEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 301 ELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 301 ~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
..++.|+.++.+..||..+.+- +..+........+...++.+++.|+.++.|.+||+.+.
T Consensus 267 ~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTSTCEF--VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp TEEEEEETTSEEEEEETTTCCE--EEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred CEEEEEeCCCeEEEEECCcCcE--EEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCC
Confidence 8888898899999999987643 33333333334444556777777788889999999865
No 40
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.84 E-value=0.0058 Score=53.95 Aligned_cols=173 Identities=11% Similarity=-0.002 Sum_probs=96.6
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
+.+.+||+. +++...........-++++.. +++||+..... ..+.+||+. +. ..... ++....
T Consensus 83 ~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~~~~-g~----~~~~~-~~~~~~- 146 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG--------DRIGKLTAD-GT----IYEYD-LPNKGS- 146 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTT--------TEEEEECTT-SC----EEEEE-CSSTTC-
T ss_pred CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCC--------CeEEEECCC-CC----EEEcc-CCCCCC-
Confidence 468899988 666543211111222333333 67888875322 368889987 55 44332 121111
Q ss_pred ccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCc-eEEEeeCCeEEEEeCCCCcEEEEECCCC
Q 016368 243 REAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGP-AASTMNEEELYVVNEGKGRLSKYDADHD 320 (390)
Q Consensus 243 r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~g~lyv~gg~~~~v~~yd~~~~ 320 (390)
....++. -+|++|+.. .+...+.+||+ +++...... +.....+ .++...+|.||+.....+.+.+||+ +.
T Consensus 147 -~~~~i~~d~~g~l~v~~---~~~~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g 218 (300)
T 2qc5_A 147 -YPAFITLGSDNALWFTE---NQNNSIGRITN-TGKLEEYPL--PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG 218 (300)
T ss_dssp -CEEEEEECTTSSEEEEE---TTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred -CceeEEECCCCCEEEEe---cCCCeEEEECC-CCcEEEeeC--CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC
Confidence 0233443 367888873 12456788998 666665432 1111222 3333236899988766678999999 55
Q ss_pred ceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcC
Q 016368 321 WWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 321 ~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~ 360 (390)
.+.............+++.- +|.||+.....+.+..+|+.
T Consensus 219 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 219 EISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred cEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 66554311112223445444 67888875556788888873
No 41
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.82 E-value=0.00052 Score=63.69 Aligned_cols=172 Identities=13% Similarity=0.108 Sum_probs=93.9
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+.+||..+++....-.... .-.+++.. +..||+.+..+ ..+.+||+.+++ -...-.....
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~--------~~v~v~d~~~~~----~~~~~~~~~~-- 117 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS--------STLSVIDTTSNT----VAGTVKTGKS-- 117 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTT--------TEEEEEETTTTE----EEEEEECSSS--
T ss_pred CeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCC--------CEEEEEECCCCe----EEEEEeCCCC--
Confidence 478999998886544322222 22223332 34566665433 378999999887 4332222211
Q ss_pred cccceEEEEE-CC-EEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC-eEEEEeCCCCcEEEEECC
Q 016368 242 SREAVEAVGF-KG-NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE-ELYVVNEGKGRLSKYDAD 318 (390)
Q Consensus 242 ~r~~~~~~~~-~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd~~ 318 (390)
..+++.. ++ .+|+.+ .....+.+||+.+.+....-. . ......++...++ .||+.+..++.+..||..
T Consensus 118 ---~~~~~~s~dg~~l~~~~---~~~~~v~~~d~~~~~~~~~~~-~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 118 ---PLGLALSPDGKKLYVTN---NGDKTVSVINTVTKAVINTVS-V--GRSPKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp ---EEEEEECTTSSEEEEEE---TTTTEEEEEETTTTEEEEEEE-C--CSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ---cceEEECCCCCEEEEEe---CCCCEEEEEECCCCcEEEEEe-c--CCCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 1333332 44 466663 124567899998876544322 1 1111233332344 566777778899999998
Q ss_pred CCceEEcccccccccceeEEEE-CC-EEEEEee--CCceEEEEEcCCC
Q 016368 319 HDWWDEVIELAELKGAEKITAA-RG-RVCAVCE--NGERIMVVDVLAS 362 (390)
Q Consensus 319 ~~~W~~i~~~p~~r~~~~~~~~-~g-~l~i~g~--~~~~v~~~d~~~~ 362 (390)
+.+..... +.......++.. +| .|++.+. .+..+.+||+.+.
T Consensus 189 ~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 189 TNSVIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp TTEEEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred CCeEEEEE--ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 76544332 222222333333 44 4555543 5678999998765
No 42
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.80 E-value=0.0051 Score=54.31 Aligned_cols=178 Identities=11% Similarity=0.029 Sum_probs=96.5
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
..+.+||+.......+..... ..-.++++. +++||+..... ..+.+||+.... ...+........
T Consensus 100 ~~i~~~d~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~--------~~i~~~~~~g~~----~~~~~~~~~~~~- 165 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECKV--------MRVIIFDQNGNV----LHKFGCSKHLEF- 165 (286)
T ss_dssp CEEEEECTTSCEEEEECTTTC-SCEEEEEECTTSCEEEEETTT--------TEEEEECTTSCE----EEEEECTTTCSS-
T ss_pred CEEEEECCCCcEEEEecCccC-CCceEEEEeCCCCEEEEECCC--------CEEEEEcCCCCE----EEEeCCCCccCC-
Confidence 468889965443333321111 111233332 67888875432 378899976654 333322111111
Q ss_pred ccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCC-cEEEEECCCC
Q 016368 243 REAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKG-RLSKYDADHD 320 (390)
Q Consensus 243 r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~-~v~~yd~~~~ 320 (390)
..++++ -+|++|+.. .....+.+||+..+....+.. .........+++..+|.||+....++ .+.+||++..
T Consensus 166 --p~~i~~~~~g~l~v~~---~~~~~i~~~~~~g~~~~~~~~-~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 166 --PNGVVVNDKQEIFISD---NRAHCVKVFNYEGQYLRQIGG-EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp --EEEEEECSSSEEEEEE---GGGTEEEEEETTCCEEEEESC-TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred --cEEEEECCCCCEEEEE---CCCCEEEEEcCCCCEEEEEcc-CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 133333 368899873 124567899986654444432 11001112344334789999987775 9999998755
Q ss_pred ceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 321 WWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 321 ~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.-..+..-.......+++.. +|+||+. ..++.|.+|+....
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 240 LISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 43333321111123345544 7889888 45678999987654
No 43
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.77 E-value=0.0042 Score=54.15 Aligned_cols=175 Identities=11% Similarity=0.057 Sum_probs=97.3
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
+.+.+||+.+........... ..-.+++.. +++||+... . ..+.+||+.+.. ...+...... .
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~-~--------~~i~~~d~~~~~----~~~~~~~~~~-~- 109 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF-N--------NRVVTLAAGSNN----QTVLPFDGLN-Y- 109 (270)
T ss_dssp CEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET-T--------TEEEEECTTCSC----CEECCCCSCS-S-
T ss_pred CcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC-C--------CEEEEEeCCCce----EeeeecCCcC-C-
Confidence 578889987766544332111 111233443 577888764 2 378899998876 4444321111 1
Q ss_pred ccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc
Q 016368 243 REAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 243 r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
..++++. +|++|+... +...+.+||..+........ ... .....++...+|+||+.....+.+.+||..+..
T Consensus 110 --p~~i~~~~~g~l~v~~~---~~~~i~~~~~~~~~~~~~~~-~~~-~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 110 --PEGLAVDTQGAVYVADR---GNNRVVKLAAGSKTQTVLPF-TGL-NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp --EEEEEECTTCCEEEEEG---GGTEEEEECTTCCSCEECCC-CSC-CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred --CcceEECCCCCEEEEEC---CCCEEEEEECCCceeEeecc-ccC-CCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 1344443 778998731 23456788776665443322 111 112234432468999988777799999998765
Q ss_pred eEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 322 WDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 322 W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
-..... .......+++.. +|.||+....++.|.++|..+.
T Consensus 183 ~~~~~~-~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 183 QVVLPF-TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp EEECCC-SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred eEeecc-cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 443321 111233455554 5689988666778999998664
No 44
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.76 E-value=0.011 Score=51.95 Aligned_cols=174 Identities=7% Similarity=-0.044 Sum_probs=95.2
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
..++++|+ +++............-.+++.. ++++|+.... ...+.+||+ ++. ...... +....
T Consensus 120 ~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~~~-~g~----~~~~~~-~~~~~- 183 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ--------NNAIGRITE-SGD----ITEFKI-PTPAS- 183 (299)
T ss_dssp TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT--------TTEEEEECT-TCC----EEEEEC-SSTTC-
T ss_pred ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC--------CCEEEEEcC-CCc----EEEeeC-CCCCC-
Confidence 46889998 6655543211111122233333 5788886422 237889999 666 554321 11111
Q ss_pred ccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCc-eEEEeeCCeEEEEeCCCCcEEEEECCCC
Q 016368 243 REAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGP-AASTMNEEELYVVNEGKGRLSKYDADHD 320 (390)
Q Consensus 243 r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~g~lyv~gg~~~~v~~yd~~~~ 320 (390)
...+++.. +|++|+.. .....+.+||+ +++...... +.....+ .++...+|.||+.....+.+.+||+. .
T Consensus 184 -~~~~i~~~~~g~l~v~~---~~~~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g 255 (299)
T 2z2n_A 184 -GPVGITKGNDDALWFVE---IIGNKIGRITT-SGEITEFKI--PTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-N 255 (299)
T ss_dssp -CEEEEEECTTSSEEEEE---TTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-T
T ss_pred -cceeEEECCCCCEEEEc---cCCceEEEECC-CCcEEEEEC--CCCCCCceeEEECCCCCEEEeccCCceEEEECCC-C
Confidence 01334433 57888873 12456788999 777765432 1111222 33332468899887667799999994 4
Q ss_pred ceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 321 WWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 321 ~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
....+..........+++..+|.||+... .+.+..+|+.+.
T Consensus 256 ~~~~~~~~~~~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 256 IIEEYPIQIKSAEPHGICFDGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEEEEECSSSSCCEEEEEECSSCEEEEET-TTEEEEEEEC--
T ss_pred ceEEEeCCCCCCccceEEecCCCEEEEec-CCcEEEEEcCcc
Confidence 44443211111223444446778888743 568999998765
No 45
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.76 E-value=0.0048 Score=57.90 Aligned_cols=175 Identities=11% Similarity=0.041 Sum_probs=95.4
Q ss_pred CCcEEEeCCCCceecCCCCC---CCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLS---IPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKD 238 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~---~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~ 238 (390)
..+.+||+.+++.....+.. ..........+ ++++++.++.+. .+.+||..+.+ -...-....
T Consensus 144 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~--------~v~~~d~~~~~----~~~~~~~~~ 211 (433)
T 3bws_A 144 EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN--------AVHVFDLKTLA----YKATVDLTG 211 (433)
T ss_dssp SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT--------EEEEEETTTCC----EEEEEECSS
T ss_pred CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC--------EEEEEECCCce----EEEEEcCCC
Confidence 46999999988766533221 11222222333 678888877553 78999998866 222111111
Q ss_pred CCccccceEEEEE-CC-EEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeC--------C
Q 016368 239 GRFSREAVEAVGF-KG-NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNE--------G 308 (390)
Q Consensus 239 ~~~~r~~~~~~~~-~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg--------~ 308 (390)
. . ..+++.. ++ .+|+.+. ....+.+||+.+.+....-. .......++...+|+.+++++ .
T Consensus 212 ~-~---~~~~~~~~~~~~l~~~~~---~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 212 K-W---SKILLYDPIRDLVYCSNW---ISEDISVIDRKTKLEIRKTD---KIGLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp S-S---EEEEEEETTTTEEEEEET---TTTEEEEEETTTTEEEEECC---CCSEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred C-C---eeEEEEcCCCCEEEEEec---CCCcEEEEECCCCcEEEEec---CCCCceEEEEcCCCCEEEEEECCCCccccC
Confidence 1 1 1333333 33 4666631 23467899998776543322 111112233223565555544 3
Q ss_pred CCcEEEEECCCCceEEcccccccccceeEEEE-CC-EEEEEeeCCceEEEEEcCCC
Q 016368 309 KGRLSKYDADHDWWDEVIELAELKGAEKITAA-RG-RVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 309 ~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g-~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.+.+||..+.+-..... .......++.. ++ .+|+.+..++.+.+||+.+.
T Consensus 282 dg~i~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTIG--PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp CEEEEEEETTTTEEEEEEE--EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEECCCCcEEeecc--CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 5689999998765433321 11122233333 34 68888777789999998864
No 46
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.65 E-value=0.00087 Score=62.14 Aligned_cols=172 Identities=13% Similarity=0.084 Sum_probs=96.8
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GG-VVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
+.+.+||..+++-...-... ..-.+++.. ++ .||+.++.+. .+.+||..+++ -...-.... .
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d~--------~i~v~d~~~~~----~~~~~~~~~--~ 75 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHSN--------DVSIIDTATNN----VIATVPAGS--S 75 (391)
T ss_dssp TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGGT--------EEEEEETTTTE----EEEEEECSS--S
T ss_pred CEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCCC--------eEEEEECCCCe----EEEEEECCC--C
Confidence 57889999887654321111 112233332 34 5777765543 78999998877 433222222 1
Q ss_pred cccceEEEEE-CCE-EEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC-eEEEEeCCCCcEEEEECC
Q 016368 242 SREAVEAVGF-KGN-LCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE-ELYVVNEGKGRLSKYDAD 318 (390)
Q Consensus 242 ~r~~~~~~~~-~g~-lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd~~ 318 (390)
..+++.. +++ +|+.+ .....+.+||+.+++-...-. .......++...+| .||+.++.++.+..||..
T Consensus 76 ---v~~~~~spdg~~l~~~~---~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 76 ---PQGVAVSPDGKQVYVTN---MASSTLSVIDTTSNTVAGTVK---TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp ---EEEEEECTTSSEEEEEE---TTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ---ccceEECCCCCEEEEEE---CCCCEEEEEECCCCeEEEEEe---CCCCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 1333332 444 66653 123568899998876443222 11111233332345 477788778899999998
Q ss_pred CCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 319 HDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 319 ~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+.+...... .......++.. +..|++.+..++.+.+||+.+.
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 147 TKAVINTVS--VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp TTEEEEEEE--CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCcEEEEEe--cCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 876544322 22222334443 3457677666778999998775
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.64 E-value=0.015 Score=51.16 Aligned_cols=180 Identities=7% Similarity=0.003 Sum_probs=98.9
Q ss_pred CCcEEEeCCCCceecCCCCC---CC-CcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLS---IP-RRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK 237 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~---~~-r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~ 237 (390)
..+.+||+.......++... .. ..-.++++. ++.||+.+... ...+.+||..... -+.+....
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-------~~~i~~~d~~g~~----~~~~~~~~ 119 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-------THQIQIYNQYGQF----VRKFGATI 119 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-------GCEEEEECTTSCE----EEEECTTT
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-------CCEEEEECCCCcE----EEEecCcc
Confidence 46889998755443333211 11 122344442 68899886431 2378899955443 33332211
Q ss_pred CCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEE
Q 016368 238 DGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYD 316 (390)
Q Consensus 238 ~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd 316 (390)
.. . ..++++ -+|++|+.. .....+.+||+.......... .........+++..+|+||+.+..++.+.+||
T Consensus 120 ~~-~---~~~i~~~~~g~l~v~~---~~~~~i~~~~~~g~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 120 LQ-H---PRGVTVDNKGRIIVVE---CKVMRVIIFDQNGNVLHKFGC-SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFN 191 (286)
T ss_dssp CS-C---EEEEEECTTSCEEEEE---TTTTEEEEECTTSCEEEEEEC-TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEE
T ss_pred CC-C---ceEEEEeCCCCEEEEE---CCCCEEEEEcCCCCEEEEeCC-CCccCCcEEEEECCCCCEEEEECCCCEEEEEc
Confidence 11 1 133443 367899873 123567789976554444322 11111112344334689999887778999999
Q ss_pred CCCCceEEcccccccccceeEEEE-CCEEEEEeeCCc-eEEEEEcCCC
Q 016368 317 ADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGE-RIMVVDVLAS 362 (390)
Q Consensus 317 ~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~-~v~~~d~~~~ 362 (390)
+.......+..........+++.. +|.||+....++ .|.+||....
T Consensus 192 ~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 192 YEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp TTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred CCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 876544444321111233445554 678998865555 8999996543
No 48
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.62 E-value=0.009 Score=52.68 Aligned_cols=172 Identities=9% Similarity=0.016 Sum_probs=96.8
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
+.+.+||+. ++............-++++.. ++.||+..... ..+.+||+. +. .+..........
T Consensus 41 ~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~v~~~d~~-g~----~~~~~~~~~~~~- 105 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGA--------NKIGKLSKK-GG----FTEYPLPQPDSG- 105 (300)
T ss_dssp TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTT--------TEEEEECTT-SC----EEEEECSSTTCC-
T ss_pred CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCC--------CeEEEECCC-CC----eEEecCCCCCCC-
Confidence 578899988 666553211111122233332 57888865322 368899988 66 554332111111
Q ss_pred ccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc
Q 016368 243 REAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 243 r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
..+++.. +|++|+.. .....+..||+. ++...... .........++...+|+||+.....+.+++||+ +.+
T Consensus 106 --~~~i~~~~~g~l~v~~---~~~~~i~~~~~~-g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 177 (300)
T 2qc5_A 106 --PYGITEGLNGDIWFTQ---LNGDRIGKLTAD-GTIYEYDL-PNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGK 177 (300)
T ss_dssp --EEEEEECSTTCEEEEE---TTTTEEEEECTT-SCEEEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred --CccceECCCCCEEEEc---cCCCeEEEECCC-CCEEEccC-CCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCc
Confidence 2444443 68899873 123457789987 66554322 111111223333246889988766778999999 566
Q ss_pred eEEcccccc-cccceeEEEE-CCEEEEEeeCCceEEEEEc
Q 016368 322 WDEVIELAE-LKGAEKITAA-RGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 322 W~~i~~~p~-~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~ 359 (390)
...+. ++. .....+++.. +|.||+....++.+.++|.
T Consensus 178 ~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 178 LEEYP-LPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp EEEEE-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT
T ss_pred EEEee-CCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC
Confidence 66543 221 2223344444 6788887555667888887
No 49
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.56 E-value=0.052 Score=50.49 Aligned_cols=174 Identities=11% Similarity=0.030 Sum_probs=103.7
Q ss_pred CCCcEEEeCCCCceecCCC--CCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCC
Q 016368 163 LASPLAFNPQSNTWFFGPQ--LSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKD 238 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~--~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~ 238 (390)
.+.++++++.....+.+.. +..| .++++. ++.||+.-.. ...++++++.... -+.+..-..
T Consensus 137 ~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~lY~~d~~--------~~~I~~~~~dg~~----~~~l~~~~l 201 (386)
T 3v65_B 137 LDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG--------TSRIEVANLDGAH----RKVLLWQSL 201 (386)
T ss_dssp TTEEEEEETTSCCEEEEECSSCSCC---CCEEEETTTTEEEEEETT--------TTEEEECBTTSCS----CEEEECSSC
T ss_pred CCcEEEEecCCCCcEEEEeCCCCCc---cEEEEEeCCCeEEEEcCC--------CCeEEEEeCCCCc----eEEeecCCC
Confidence 3578999998776544321 2222 233443 7899997432 3478888887654 333322111
Q ss_pred CCccccceEEEEE--CCEEEEEcccCCCC-ceeEEEeCCCCCeEecCCCCCCCCCCc-eEEEe-eCCeEEEEeCCCCcEE
Q 016368 239 GRFSREAVEAVGF--KGNLCMVNLKGNGA-KDGAIYNVELDKWKEMPEGMHAGWNGP-AASTM-NEEELYVVNEGKGRLS 313 (390)
Q Consensus 239 ~~~~r~~~~~~~~--~g~lyv~gg~g~~~-~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~-~~g~lyv~gg~~~~v~ 313 (390)
.. ..++++. ++.||+.. .+. ..++++++....-+.+.. .....+ ++++. .+++||+.....+.|+
T Consensus 202 ~~----P~giavdp~~g~ly~td---~~~~~~I~r~~~dG~~~~~~~~---~~~~~PnGlavd~~~~~lY~aD~~~~~I~ 271 (386)
T 3v65_B 202 EK----PRAIALHPMEGTIYWTD---WGNTPRIEASSMDGSGRRIIAD---THLFWPNGLTIDYAGRRMYWVDAKHHVIE 271 (386)
T ss_dssp SC----EEEEEEETTTTEEEEEE---CSSSCEEEEEETTSCSCEEEEC---SSCSCEEEEEEEGGGTEEEEEETTTTEEE
T ss_pred CC----CcEEEEEcCCCeEEEec---cCCCCEEEEEeCCCCCcEEEEE---CCCCCeeeEEEeCCCCEEEEEECCCCEEE
Confidence 11 1344544 78999983 233 568889887554333322 111112 34432 4789999998888999
Q ss_pred EEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 314 KYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 314 ~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++|.....=..+... ......++++.++.||+.-..+..|..+|..+.
T Consensus 272 ~~d~dG~~~~~~~~~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 272 RANLDGSHRKAVISQ-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EECTTSCSCEEEECS-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEeCCCCeeEEEEEC-CCCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 999875433333221 123456788889999998666778999995443
No 50
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.55 E-value=0.0036 Score=56.39 Aligned_cols=221 Identities=9% Similarity=0.016 Sum_probs=112.8
Q ss_pred eeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCce-e-
Q 016368 100 MEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTW-F- 177 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W-~- 177 (390)
..+.++|+.+++....-..+. .... .+..-++..+++.+. ..+.+++||+.+++. .
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~-~~~~---------------~~~s~dg~~l~~~~~------~~~~i~~~d~~~~~~~~~ 77 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGY-DFVD---------------TAITSDCSNVVVTSD------FCQTLVQIETQLEPPKVV 77 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCC-CEEE---------------EEECSSSCEEEEEES------TTCEEEEEECSSSSCEEE
T ss_pred CeEEEEeCcccceeeeEEccC-Ccce---------------EEEcCCCCEEEEEeC------CCCeEEEEECCCCceeEE
Confidence 468889999887755433322 1100 222234554444432 224899999988864 2
Q ss_pred cCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCE
Q 016368 178 FGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGN 254 (390)
Q Consensus 178 ~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~ 254 (390)
.+.....+. ++++.. +..|| .+.... ....+.+||..++. -...-.... . ...++. -+|+
T Consensus 78 ~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~-----~~~~i~v~d~~~~~----~~~~~~~~~--~---~~~~~~spdg~ 140 (331)
T 3u4y_A 78 AIQEGQSSM--ADVDITPDDQFAV-TVTGLN-----HPFNMQSYSFLKNK----FISTIPIPY--D---AVGIAISPNGN 140 (331)
T ss_dssp EEEECSSCC--CCEEECTTSSEEE-ECCCSS-----SSCEEEEEETTTTE----EEEEEECCT--T---EEEEEECTTSS
T ss_pred ecccCCCCc--cceEECCCCCEEE-EecCCC-----CcccEEEEECCCCC----eEEEEECCC--C---ccceEECCCCC
Confidence 222111222 212332 34566 332211 12389999998877 433222211 1 133333 2554
Q ss_pred -EEEEcccCCCCce-eEEEeCCCCC-eEec-CCCCCCCCCCceEEEeeCCe-EEEEeCCCCcEEEEECCCCce-EEcccc
Q 016368 255 -LCMVNLKGNGAKD-GAIYNVELDK-WKEM-PEGMHAGWNGPAASTMNEEE-LYVVNEGKGRLSKYDADHDWW-DEVIEL 328 (390)
Q Consensus 255 -lyv~gg~g~~~~~-~~~yd~~~~~-W~~~-~~~~~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd~~~~~W-~~i~~~ 328 (390)
+|+.+. +... +.+|+...+. -... ....+.......++...+|+ +|+.+..++.+.+||.++.+. +.+..+
T Consensus 141 ~l~~~~~---~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~ 217 (331)
T 3u4y_A 141 GLILIDR---SSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAV 217 (331)
T ss_dssp CEEEEEE---TTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEE
T ss_pred EEEEEec---CCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeec
Confidence 777631 2234 6677765432 1111 00011111112333324665 888877778999999987765 223334
Q ss_pred cccccceeEEEE-CCE-EEEEeeCCceEEEEEcCCC
Q 016368 329 AELKGAEKITAA-RGR-VCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 329 p~~r~~~~~~~~-~g~-l~i~g~~~~~v~~~d~~~~ 362 (390)
+.......++.. +|+ ||+.....+.+.++|+.+.
T Consensus 218 ~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 218 GTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp ECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred cCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 433333445544 555 7776555667999998765
No 51
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.49 E-value=0.014 Score=55.14 Aligned_cols=284 Identities=11% Similarity=0.042 Sum_probs=146.4
Q ss_pred cCCCCCCcHHHHHHHHhcCC---chhhHhhhHhHHHhhcCCCCCCcccEEEEeecC--CCCCCCCCC-cccCCCceeE-E
Q 016368 31 LLLLPGLPNHLADRCLSSLP---PALLFSVCHSWRRLLYSPYFPPFFSLYALLFNN--NKPSHNNNN-YYSFNSSMEF-F 103 (390)
Q Consensus 31 ~~~~~~LP~dl~~~iL~rLP---l~~~r~Vck~W~~l~~s~~f~~~~~l~~~~~~~--~~~~~~~~~-~~~~~~~~~~-~ 103 (390)
...+..||+|++..||++|+ +.++.+|||+|+.++.++.+... .+.... +........ .........+ .
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~ 91 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE----KCKEEGIDEPLHIKRRKVIKPGFIHSPWKS 91 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHH----HHTTTTCCSCCCCCC--CCSSCCCCCHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhh----heeecccccccccccceecCCCccCCcHHH
Confidence 35578899999999999999 89999999999999988753320 000000 000000000 0000000000 0
Q ss_pred EE---eCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCC
Q 016368 104 CF---DPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGP 180 (390)
Q Consensus 104 ~~---d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~ 180 (390)
.| ......|..-...+. .. ...|... -..++..++..++.|+. -..+.+||..+++-...
T Consensus 92 ~~~~~~~~~~~w~~~~~~~~-~~---l~~h~~~-----v~~~~~~~g~~l~sg~~-------dg~i~vwd~~~~~~~~~- 154 (445)
T 2ovr_B 92 AYIRQHRIDTNWRRGELKSP-KV---LKGHDDH-----VITCLQFCGNRIVSGSD-------DNTLKVWSAVTGKCLRT- 154 (445)
T ss_dssp HHHHHHHHHHHHHHSCCCCC-EE---EECSTTS-----CEEEEEEETTEEEEEET-------TSCEEEEETTTCCEEEE-
T ss_pred HHhhhhhhhhcccCCCccee-EE---ecccCCC-----cEEEEEEcCCEEEEEEC-------CCcEEEEECCCCcEEEE-
Confidence 00 000011222111111 00 0111110 01455667777777654 24688999887754321
Q ss_pred CCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcc
Q 016368 181 QLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNL 260 (390)
Q Consensus 181 ~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg 260 (390)
+......-.+....+.+++.|+.+. .+.+||..++. -...-..... ...++..++..++.|+
T Consensus 155 -~~~h~~~v~~~~~~~~~l~s~~~dg--------~i~vwd~~~~~----~~~~~~~h~~-----~v~~~~~~~~~l~s~s 216 (445)
T 2ovr_B 155 -LVGHTGGVWSSQMRDNIIISGSTDR--------TLKVWNAETGE----CIHTLYGHTS-----TVRCMHLHEKRVVSGS 216 (445)
T ss_dssp -CCCCSSCEEEEEEETTEEEEEETTS--------CEEEEETTTTE----EEEEECCCSS-----CEEEEEEETTEEEEEE
T ss_pred -EcCCCCCEEEEEecCCEEEEEeCCC--------eEEEEECCcCc----EEEEECCCCC-----cEEEEEecCCEEEEEe
Confidence 1111112222333455666666654 78899998876 2221111111 1223333444444431
Q ss_pred cCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE
Q 016368 261 KGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA 340 (390)
Q Consensus 261 ~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~ 340 (390)
....+.+||..+.+-...-. ........+. .++..++.|+.++.+..||..+.+ .+..+............
T Consensus 217 ---~dg~i~~wd~~~~~~~~~~~---~~~~~v~~~~-~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 217 ---RDATLRVWDIETGQCLHVLM---GHVAAVRCVQ-YDGRRVVSGAYDFMVKVWDPETET--CLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp ---TTSEEEEEESSSCCEEEEEE---CCSSCEEEEE-ECSSCEEEEETTSCEEEEEGGGTE--EEEEECCCSSCEEEEEE
T ss_pred ---CCCEEEEEECCCCcEEEEEc---CCcccEEEEE-ECCCEEEEEcCCCEEEEEECCCCc--EeEEecCCCCceEEEEE
Confidence 33457789988765322111 1111122233 688889999999999999987653 33333333333344444
Q ss_pred CCEEEEEeeCCceEEEEEcCCC
Q 016368 341 RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 341 ~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++..++.|+.++.+.+||+.+.
T Consensus 288 ~~~~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 288 DGIHVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp CSSEEEEEETTSCEEEEETTTC
T ss_pred CCCEEEEEeCCCeEEEEECCCC
Confidence 7777777787889999998775
No 52
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.48 E-value=0.023 Score=53.47 Aligned_cols=211 Identities=11% Similarity=0.001 Sum_probs=111.0
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCE-EEEEeccCCCCCCCccCeEEEEECCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGV-VYVASGVGAHYRGDVARSMKKWDLKS 223 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t 223 (390)
++..+++++... ....++++|..+++...+..... ...+.+.. +++ |++.+..+. ...+++||..+
T Consensus 189 dg~~la~~s~~~----~~~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~~ 256 (415)
T 2hqs_A 189 DGSKLAYVTFES----GRSALVIQTLANGAVRQVASFPR--HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLAS 256 (415)
T ss_dssp TSSEEEEEECTT----SSCEEEEEETTTCCEEEEECCSS--CEEEEEECTTSSEEEEEECTTS------SCEEEEEETTT
T ss_pred CCCEEEEEEecC----CCcEEEEEECCCCcEEEeecCCC--cccCEEEcCCCCEEEEEEecCC------CceEEEEECCC
Confidence 445555554321 12579999999987765543321 11222222 454 554544332 34799999998
Q ss_pred CccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeE
Q 016368 224 DREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEEL 302 (390)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~l 302 (390)
+. ...+...... ....+. -+|+..+++....+...+.++|..+++-..+.. .......++...+|+.
T Consensus 257 ~~----~~~l~~~~~~-----~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~---~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 257 GQ----IRQVTDGRSN-----NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITW---EGSQNQDADVSSDGKF 324 (415)
T ss_dssp CC----EEECCCCSSC-----EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCC---SSSEEEEEEECTTSSE
T ss_pred CC----EEeCcCCCCc-----ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEec---CCCcccCeEECCCCCE
Confidence 88 6655443221 122222 266644443221233457788988876555433 1111112232356765
Q ss_pred EEEeCCC---CcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeC-Cc--eEEEEEcCCCCCcceEecCCCCe
Q 016368 303 YVVNEGK---GRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCEN-GE--RIMVVDVLASPARAWLVDPPRGF 375 (390)
Q Consensus 303 yv~gg~~---~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~-~~--~v~~~d~~~~~~~~W~~~~p~g~ 375 (390)
++++..+ ..++.+|.++.....+.... ....+... +|+.++++.. +. .++++|+.+.. ...+....|
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~--~~~l~~~~~- 398 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF--KARLPATDG- 398 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC--EEECCCSSS-
T ss_pred EEEEECcCCceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc--EEEeeCCCC-
Confidence 5555432 38999999998877655321 22333333 5665555433 32 79999987551 222333444
Q ss_pred eEEEEEeeccc
Q 016368 376 QVVAVHVLPRM 386 (390)
Q Consensus 376 ~~~~~~~~~~~ 386 (390)
.+..++.-|.+
T Consensus 399 ~v~~~~~~~~~ 409 (415)
T 2hqs_A 399 QVKFPAWSPYL 409 (415)
T ss_dssp EEEEEEECCCC
T ss_pred CCcCCcccccc
Confidence 45555555543
No 53
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.48 E-value=0.056 Score=48.74 Aligned_cols=175 Identities=11% Similarity=0.039 Sum_probs=100.8
Q ss_pred CCCcEEEeCCC----Cceec-CC-CCCCCCcceEEEE--ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcc
Q 016368 163 LASPLAFNPQS----NTWFF-GP-QLSIPRRWCAMGS--VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKA 234 (390)
Q Consensus 163 ~~~~~~~dp~t----~~W~~-~~-~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~ 234 (390)
.+.++++++.+ ..... ++ .+..| .++++ .++.||+.-. ....++++|+.... -+.+.
T Consensus 51 ~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glavd~~~~~ly~~d~--------~~~~I~~~~~~g~~----~~~~~ 115 (316)
T 1ijq_A 51 QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVK----RKTLF 115 (316)
T ss_dssp TTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEET--------TTTEEEEEETTSSS----EEEEE
T ss_pred CCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEEeecCCeEEEEEC--------CCCEEEEEeCCCCc----eEEEE
Confidence 35788899876 22222 11 12222 34444 3789999743 23478899987654 33332
Q ss_pred cCCCCCccccceEEEEE--CCEEEEEcccCCCC-ceeEEEeCCCCCeEecCCCCCCCCCCc-eEEEe-eCCeEEEEeCCC
Q 016368 235 QLKDGRFSREAVEAVGF--KGNLCMVNLKGNGA-KDGAIYNVELDKWKEMPEGMHAGWNGP-AASTM-NEEELYVVNEGK 309 (390)
Q Consensus 235 ~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~-~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~-~~g~lyv~gg~~ 309 (390)
...... ..++++. ++.||+.. .+. ..++++++....-+.+.. . ....+ ++++. .+++||+.....
T Consensus 116 ~~~~~~----P~~iavdp~~g~ly~~d---~~~~~~I~~~~~dG~~~~~~~~-~--~~~~P~gla~d~~~~~lY~~D~~~ 185 (316)
T 1ijq_A 116 RENGSK----PRAIVVDPVHGFMYWTD---WGTPAKIKKGGLNGVDIYSLVT-E--NIQWPNGITLDLLSGRLYWVDSKL 185 (316)
T ss_dssp ECTTCC----EEEEEEETTTTEEEEEE---CSSSCEEEEEETTSCCEEEEEC-S--SCSCEEEEEEETTTTEEEEEETTT
T ss_pred ECCCCC----cceEEeCCCCCEEEEEc---cCCCCeEEEEcCCCCCeEEEEE-C--CCCCceEEEEeccCCEEEEEECCC
Confidence 211111 1344543 78999983 222 567888886544333322 1 11122 34431 368999999888
Q ss_pred CcEEEEECCCCceEEcccc-cccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 310 GRLSKYDADHDWWDEVIEL-AELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 310 ~~v~~yd~~~~~W~~i~~~-p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+.|+++|.....=+.+... .......++++.++.||+.-..++.|..+|..+.
T Consensus 186 ~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 186 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCC
Confidence 8999999986443444322 1233456788889999998666778999997654
No 54
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.47 E-value=0.047 Score=47.62 Aligned_cols=178 Identities=8% Similarity=-0.031 Sum_probs=101.2
Q ss_pred CCCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC
Q 016368 163 LASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR 240 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~ 240 (390)
.+.+.++++.+..-..+..... ..-+++++. ++.||+.-.. ...+.++|+.... -+.+.......
T Consensus 57 ~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~g~~----~~~~~~~~~~~ 123 (267)
T 1npe_A 57 EPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMDGTQ----RRVLFDTGLVN 123 (267)
T ss_dssp TTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCS----CEEEECSSCSS
T ss_pred CCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC--------CCEEEEEEcCCCC----EEEEEECCCCC
Confidence 3579999987664332211111 122344443 5799997533 3478899987654 33332211111
Q ss_pred ccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEee-CCeEEEEeCCCCcEEEEEC
Q 016368 241 FSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMN-EEELYVVNEGKGRLSKYDA 317 (390)
Q Consensus 241 ~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~g~lyv~gg~~~~v~~yd~ 317 (390)
...+++. ++++|+.... .....+.++++....-+.+.. ... ....++++.. ++.||+.....+.+.+||+
T Consensus 124 ----P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg~~~~~~~~-~~~-~~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 124 ----PRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGTNRRILAQ-DNL-GLPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp ----EEEEEEETTTTEEEEEECC-SSSCEEEEEETTSCCCEEEEC-TTC-SCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ----ccEEEEeeCCCEEEEEECC-CCCcEEEEEecCCCCcEEEEE-CCC-CCCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 1344444 6899998311 012456678876543333321 111 1112333312 5799999988889999999
Q ss_pred CCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 318 DHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 318 ~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+..-..+. .......+++..++.||+....++.|.++|..+.
T Consensus 197 ~g~~~~~~~--~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 197 AQPGRRKVL--EGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp TEEEEEEEE--ECCCSEEEEEEETTEEEEEETTTTEEEEEETTTT
T ss_pred CCCceEEEe--cCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCC
Confidence 864322222 1223345677778999998666779999998865
No 55
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.46 E-value=0.0082 Score=54.76 Aligned_cols=192 Identities=10% Similarity=-0.002 Sum_probs=106.3
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE--C--CEEEEEeccCCCCCCCccCeEEEEECC
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--G--GVVYVASGVGAHYRGDVARSMKKWDLK 222 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~yd~~ 222 (390)
+..++.++. -..+.+||....+++.+..+...........+ + +.+++.|+.+. .+.+||..
T Consensus 23 ~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg--------~v~iwd~~ 87 (379)
T 3jrp_A 23 GKRLATCSS-------DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKEE 87 (379)
T ss_dssp SSEEEEEET-------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS--------CEEEEEEE
T ss_pred CCEEEEEEC-------CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC--------EEEEEEcC
Confidence 455555543 13688888876666554433322222222333 2 56777776654 68899999
Q ss_pred CCccccccEEcccCCCCCccccceEEEEE-C--CEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEee-
Q 016368 223 SDREDWKWEKKAQLKDGRFSREAVEAVGF-K--GNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMN- 298 (390)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~--g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~- 298 (390)
++. |..+..+...... ..+++.. + +.+++.|+ ....+.+||..+..-...............+....
T Consensus 88 ~~~----~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 88 NGR----WSQIAVHAVHSAS--VNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp TTE----EEEEEEECCCSSC--EEEEEECCGGGCSEEEEEE---TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred CCc----eeEeeeecCCCcc--eEEEEeCCCCCCCEEEEec---CCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 988 7766654432211 1233332 2 45555531 23456789987663211111000111111222212
Q ss_pred ------------CCeEEEEeCCCCcEEEEECCCCc--eEEccccccccccee-EEEE-C---CEEEEEeeCCceEEEEEc
Q 016368 299 ------------EEELYVVNEGKGRLSKYDADHDW--WDEVIELAELKGAEK-ITAA-R---GRVCAVCENGERIMVVDV 359 (390)
Q Consensus 299 ------------~g~lyv~gg~~~~v~~yd~~~~~--W~~i~~~p~~r~~~~-~~~~-~---g~l~i~g~~~~~v~~~d~ 359 (390)
++.+++.|+.++.+..||..+.. +..+..+........ +... + +.+++.++.+..+.+||+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp C----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeC
Confidence 58888999989999999886543 555554444333333 3333 4 678888777888999998
Q ss_pred CCC
Q 016368 360 LAS 362 (390)
Q Consensus 360 ~~~ 362 (390)
.+.
T Consensus 239 ~~~ 241 (379)
T 3jrp_A 239 DNE 241 (379)
T ss_dssp SST
T ss_pred CCC
Confidence 875
No 56
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.44 E-value=0.016 Score=52.48 Aligned_cols=181 Identities=12% Similarity=0.042 Sum_probs=94.0
Q ss_pred CCCcEEEeCCCCceecCCCCCCCCcceEEEEE-C-CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC
Q 016368 163 LASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-G-GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR 240 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~ 240 (390)
...++++|+.+++....-+.. ..-..++.. + ..+|+.+..+ ..+.+||+.+++ -...-......
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~v~~~~~--------~~v~~~d~~~~~----~~~~~~~~~~~ 133 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND--LKPFGATINNTTQTLWFGNTVN--------SAVTAIDAKTGE----VKGRLVLDDRK 133 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSEEEETTTTEEEEEETTT--------TEEEEEETTTCC----EEEEEESCCCC
T ss_pred CccEEEEcCCCCeEEEEEecC--CCcceEEECCCCCEEEEEecCC--------CEEEEEeCCCCe----eEEEEecCCCc
Confidence 357999999888654322211 112233333 3 4588776543 378999998877 32221121110
Q ss_pred c-----cccceEEEEE-C-CEEEEEcccCCCCceeEEEeCCCCCeEe-cCCCCCCCCCCceEEEeeCCeEEEEeCCCCcE
Q 016368 241 F-----SREAVEAVGF-K-GNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGMHAGWNGPAASTMNEEELYVVNEGKGRL 312 (390)
Q Consensus 241 ~-----~r~~~~~~~~-~-g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v 312 (390)
. ......++.. + +.+|+.+.. ....+.+||+.+.+-.. ++. .+.....++...+|+.+++...++.+
T Consensus 134 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~i 208 (353)
T 3vgz_A 134 RTEEVRPLQPRELVADDATNTVYISGIG--KESVIWVVDGGNIKLKTAIQN---TGKMSTGLALDSEGKRLYTTNADGEL 208 (353)
T ss_dssp CCSSCCCCEEEEEEEETTTTEEEEEEES--SSCEEEEEETTTTEEEEEECC---CCTTCCCCEEETTTTEEEEECTTSEE
T ss_pred cccccCCCCCceEEECCCCCEEEEEecC--CCceEEEEcCCCCceEEEecC---CCCccceEEECCCCCEEEEEcCCCeE
Confidence 0 0001223332 4 457776311 13457889998764332 221 11111222322566544455557899
Q ss_pred EEEECCCCceEEccccc---ccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 313 SKYDADHDWWDEVIELA---ELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 313 ~~yd~~~~~W~~i~~~p---~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+||..+.+-......+ ......+++.. ++.+|+.....+.+.++|+.+.
T Consensus 209 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 209 ITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp EEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred EEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 99999876543322221 11122334444 4568777666679999999765
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.43 E-value=0.017 Score=51.70 Aligned_cols=181 Identities=9% Similarity=0.040 Sum_probs=98.3
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
++..++.++. -..+.+||..+++....-.... ..-.+++.. +++.++.|+.+. .+.+||..+.
T Consensus 152 ~~~~l~~~~~-------dg~v~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg--------~i~~~d~~~~ 215 (337)
T 1gxr_A 152 DSKVCFSCCS-------DGNIAVWDLHNQTLVRQFQGHT-DGASCIDISNDGTKLWTGGLDN--------TVRSWDLREG 215 (337)
T ss_dssp TSSEEEEEET-------TSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTS--------EEEEEETTTT
T ss_pred CCCEEEEEeC-------CCcEEEEeCCCCceeeeeeccc-CceEEEEECCCCCEEEEEecCC--------cEEEEECCCC
Confidence 3455555543 2468899998775432211111 111122222 566666666543 7889999877
Q ss_pred ccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEE
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELY 303 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~ly 303 (390)
. -...-..... ..+++. -+++.+++|+ ....+.+||..+.+-..... .......+....+++++
T Consensus 216 ~----~~~~~~~~~~-----v~~~~~s~~~~~l~~~~---~~~~i~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l 280 (337)
T 1gxr_A 216 R----QLQQHDFTSQ-----IFSLGYCPTGEWLAVGM---ESSNVEVLHVNKPDKYQLHL---HESCVLSLKFAYCGKWF 280 (337)
T ss_dssp E----EEEEEECSSC-----EEEEEECTTSSEEEEEE---TTSCEEEEETTSSCEEEECC---CSSCEEEEEECTTSSEE
T ss_pred c----eEeeecCCCc-----eEEEEECCCCCEEEEEc---CCCcEEEEECCCCCeEEEcC---CccceeEEEECCCCCEE
Confidence 6 2222222111 122332 3566666642 23457789988765433322 11112233323568888
Q ss_pred EEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEc
Q 016368 304 VVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 304 v~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~ 359 (390)
+.++.++.+..||..+.+-.... .......++... +++.++.++.++.+.+||+
T Consensus 281 ~~~~~dg~i~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 281 VSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEETTSEEEEEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEecCCCcEEEEECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 88888999999999876544221 122222233333 5667777777778888886
No 58
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.41 E-value=0.018 Score=51.42 Aligned_cols=184 Identities=8% Similarity=-0.009 Sum_probs=99.6
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcce-EEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWC-AMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
+..+++++. -..+.+||..+++......+....... +++.. +++.++.|+.+. .+.+||..+.
T Consensus 109 ~~~l~~~~~-------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~v~~~d~~~~ 173 (337)
T 1gxr_A 109 GCTLIVGGE-------ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--------NIAVWDLHNQ 173 (337)
T ss_dssp SSEEEEEES-------SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTT
T ss_pred CCEEEEEcC-------CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC--------cEEEEeCCCC
Confidence 455555543 246889999887644333222222222 22222 556666666553 6889999887
Q ss_pred ccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEE
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELY 303 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~ly 303 (390)
. ....-...... ..+++.. +++.++.++ ....+.+||+.+.+-...-. .......++...++.++
T Consensus 174 ~----~~~~~~~~~~~----i~~~~~~~~~~~l~~~~---~dg~i~~~d~~~~~~~~~~~---~~~~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 174 T----LVRQFQGHTDG----ASCIDISNDGTKLWTGG---LDNTVRSWDLREGRQLQQHD---FTSQIFSLGYCPTGEWL 239 (337)
T ss_dssp E----EEEEECCCSSC----EEEEEECTTSSEEEEEE---TTSEEEEEETTTTEEEEEEE---CSSCEEEEEECTTSSEE
T ss_pred c----eeeeeecccCc----eEEEEECCCCCEEEEEe---cCCcEEEEECCCCceEeeec---CCCceEEEEECCCCCEE
Confidence 6 33221111111 1223322 555555531 23456789988764322211 11111223323578888
Q ss_pred EEeCCCCcEEEEECCCCceEEcccccccccc-eeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 304 VVNEGKGRLSKYDADHDWWDEVIELAELKGA-EKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 304 v~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~-~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++++.++.+..||..+..-..+. ..... ..+... ++++++.++.++.+.+||+.+.
T Consensus 240 ~~~~~~~~i~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 240 AVGMESSNVEVLHVNKPDKYQLH---LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEEETTSCEEEEETTSSCEEEEC---CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEcCCCcEEEEECCCCCeEEEc---CCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 89888899999999876533222 12222 233333 5677777777789999998875
No 59
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.39 E-value=0.023 Score=50.60 Aligned_cols=187 Identities=10% Similarity=0.027 Sum_probs=97.3
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
+.+++.++. -..+.+||..+++-... +...........+ ++.+++.|+.+. .+.+||..+.
T Consensus 77 ~~~l~s~~~-------d~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~ 139 (312)
T 4ery_A 77 SNLLVSASD-------DKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVKTG 139 (312)
T ss_dssp SSEEEEEET-------TSEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETTS--------CEEEEETTTC
T ss_pred CCEEEEECC-------CCEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCCC
Confidence 455555543 24688899887643221 1111111112222 456667776654 6889999876
Q ss_pred ccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEE
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELY 303 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~ly 303 (390)
. -.. .+...... ..+++. -++++++.|+ ....+.+||..+.+-...-. .........+....+++.+
T Consensus 140 ~----~~~--~~~~~~~~--v~~~~~~~~~~~l~~~~---~d~~i~~wd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 140 K----CLK--TLPAHSDP--VSAVHFNRDGSLIVSSS---YDGLCRIWDTASGQCLKTLI-DDDNPPVSFVKFSPNGKYI 207 (312)
T ss_dssp C----EEE--EECCCSSC--EEEEEECTTSSEEEEEE---TTSCEEEEETTTCCEEEEEC-CSSCCCEEEEEECTTSSEE
T ss_pred E----EEE--EecCCCCc--EEEEEEcCCCCEEEEEe---CCCcEEEEECCCCceeeEEe-ccCCCceEEEEECCCCCEE
Confidence 6 221 22111110 122222 2566666642 23457789998765432211 1111111122223578888
Q ss_pred EEeCCCCcEEEEECCCCceEEccccc-ccccc-e-eEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 304 VVNEGKGRLSKYDADHDWWDEVIELA-ELKGA-E-KITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 304 v~gg~~~~v~~yd~~~~~W~~i~~~p-~~r~~-~-~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+.++.++.+..||..+.+-...-... ..... . .....++.+++.|+.++.|.+||+.+.
T Consensus 208 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 208 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp EEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred EEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 88888999999999876432221111 11111 1 122236777777777789999999875
No 60
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.36 E-value=0.0097 Score=53.48 Aligned_cols=179 Identities=9% Similarity=0.081 Sum_probs=94.3
Q ss_pred CcEEEeCCCCceecCCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCCCccCeEEEEECCCCccccccEEc--ccCCCCC
Q 016368 165 SPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GG-VVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKK--AQLKDGR 240 (390)
Q Consensus 165 ~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~--~~~~~~~ 240 (390)
.+.+||+.+++....- +....-+.++.. ++ .||+.+.... ..+.+|+...+.. -... ...+...
T Consensus 109 ~i~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~-------~~i~~~~~~~~g~---~~~~~~~~~~~~~ 176 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTI--PIPYDAVGIAISPNGNGLILIDRSSA-------NTVRRFKIDADGV---LFDTGQEFISGGT 176 (331)
T ss_dssp EEEEEETTTTEEEEEE--ECCTTEEEEEECTTSSCEEEEEETTT-------TEEEEEEECTTCC---EEEEEEEEECSSS
T ss_pred cEEEEECCCCCeEEEE--ECCCCccceEECCCCCEEEEEecCCC-------ceEEEEEECCCCc---EeecCCccccCCC
Confidence 7999999888654321 112222334433 44 4787765432 1277777765430 1111 1111111
Q ss_pred ccccceEEEE-ECCE-EEEEcccCCCCceeEEEeCCCCCe-EecCCCCCCCCCCceEEEeeCCe-EEEEeCCCCcEEEEE
Q 016368 241 FSREAVEAVG-FKGN-LCMVNLKGNGAKDGAIYNVELDKW-KEMPEGMHAGWNGPAASTMNEEE-LYVVNEGKGRLSKYD 316 (390)
Q Consensus 241 ~~r~~~~~~~-~~g~-lyv~gg~g~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd 316 (390)
. ...++. -+|+ +|+.+ .....+.+||+.+.+. +.+.. .+.+.....++...+|+ ||+....++.+.+||
T Consensus 177 ~---~~~~~~spdg~~l~v~~---~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 177 R---PFNITFTPDGNFAFVAN---LIGNSIGILETQNPENITLLNA-VGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFN 249 (331)
T ss_dssp S---EEEEEECTTSSEEEEEE---TTTTEEEEEECSSTTSCEEEEE-EECSSCCCCEEECTTSSEEEEECSSEEEEEEEE
T ss_pred C---ccceEECCCCCEEEEEe---CCCCeEEEEECCCCcccceeee-ccCCCCCceEEECCCCCEEEEEEcCCCEEEEEE
Confidence 1 122333 2565 77763 2345678999987765 11111 11222222333325666 666665566899999
Q ss_pred CCCCceEEccccccc-----ccc---eeEEEE-C-CEEEEEeeCCceEEEEEcCCC
Q 016368 317 ADHDWWDEVIELAEL-----KGA---EKITAA-R-GRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 317 ~~~~~W~~i~~~p~~-----r~~---~~~~~~-~-g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.++.+...+...+.. +.. ..++.. + ..||+.+..++.+.+||+.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 250 QLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp TTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 998877555433321 111 123333 4 457777666779999999876
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.33 E-value=0.043 Score=50.98 Aligned_cols=176 Identities=7% Similarity=-0.036 Sum_probs=95.2
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
..+.+||..+++............-.+++.. ++.+++.|+.++ .+.+||..+.. -...-.....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg--------~i~iwd~~~~~----~~~~~~~~~~--- 177 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG--------LVDIYDVESQT----KLRTMAGHQA--- 177 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCC----EEEEECCCSS---
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC--------eEEEEECcCCe----EEEEecCCCC---
Confidence 4699999998876554333222222223332 566667766554 68899998876 3222111111
Q ss_pred ccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCce
Q 016368 243 REAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWW 322 (390)
Q Consensus 243 r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W 322 (390)
....+..++.+++.|+ ....+.+||.....-..... ........++....++.+++.|+.++.+..||..+..-
T Consensus 178 --~v~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 251 (401)
T 4aez_A 178 --RVGCLSWNRHVLSSGS---RSGAIHHHDVRIANHQIGTL-QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP 251 (401)
T ss_dssp --CEEEEEEETTEEEEEE---TTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE
T ss_pred --ceEEEEECCCEEEEEc---CCCCEEEEecccCcceeeEE-cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc
Confidence 1333334666555532 23456789987432111111 11111112233224788899999999999999987442
Q ss_pred EEcccccccccc-eeEEEE--CCEEEEEee--CCceEEEEEcCCC
Q 016368 323 DEVIELAELKGA-EKITAA--RGRVCAVCE--NGERIMVVDVLAS 362 (390)
Q Consensus 323 ~~i~~~p~~r~~-~~~~~~--~g~l~i~g~--~~~~v~~~d~~~~ 362 (390)
.. .+...... .++... ++.+++.|+ .+..+.+||+.+.
T Consensus 252 ~~--~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 252 KF--TKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp EE--EECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred cE--EecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 22 12122222 233333 456777754 4678999998765
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.30 E-value=0.019 Score=53.43 Aligned_cols=193 Identities=11% Similarity=0.070 Sum_probs=104.0
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcce-EEEEE-CCEEEEEeccCCCCCCCccCeEEE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWC-AMGSV-GGVVYVASGVGAHYRGDVARSMKK 218 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 218 (390)
.++..++..++.|+. -..+.+||..+..-.. ..+....... +++.. ++.+++.|+.+. .+.+
T Consensus 180 ~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--------~v~i 243 (401)
T 4aez_A 180 GCLSWNRHVLSSGSR-------SGAIHHHDVRIANHQI-GTLQGHSSEVCGLAWRSDGLQLASGGNDN--------VVQI 243 (401)
T ss_dssp EEEEEETTEEEEEET-------TSEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEE
T ss_pred EEEEECCCEEEEEcC-------CCCEEEEecccCccee-eEEcCCCCCeeEEEEcCCCCEEEEEeCCC--------eEEE
Confidence 455556777766654 2468888887432110 0111111111 22222 566777777654 6889
Q ss_pred EECCCCccccccE-EcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEE
Q 016368 219 WDLKSDREDWKWE-KKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAAS 295 (390)
Q Consensus 219 yd~~t~~~~~~W~-~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 295 (390)
||..+.. -. .+...... ..+++.. +..+++.|+ |.....+.+||..+.+-...-. .......++
T Consensus 244 wd~~~~~----~~~~~~~~~~~-----v~~~~~~p~~~~ll~~~~-gs~d~~i~i~d~~~~~~~~~~~---~~~~v~~~~ 310 (401)
T 4aez_A 244 WDARSSI----PKFTKTNHNAA-----VKAVAWCPWQSNLLATGG-GTMDKQIHFWNAATGARVNTVD---AGSQVTSLI 310 (401)
T ss_dssp EETTCSS----EEEEECCCSSC-----CCEEEECTTSTTEEEEEC-CTTTCEEEEEETTTCCEEEEEE---CSSCEEEEE
T ss_pred ccCCCCC----ccEEecCCcce-----EEEEEECCCCCCEEEEec-CCCCCEEEEEECCCCCEEEEEe---CCCcEEEEE
Confidence 9998765 22 11111111 1233333 345666642 1123457789988765332211 111112223
Q ss_pred EeeCCeEEEE--eCCCCcEEEEECCCCceEEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 296 TMNEEELYVV--NEGKGRLSKYDADHDWWDEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 296 ~~~~g~lyv~--gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
...++..++. |..++.+..||..+.....+..++...... .+... +++.++.++.++.+.+||+.+.
T Consensus 311 ~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 311 WSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp ECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred ECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 2246666666 547889999999887777766554443333 33333 6777777677789999999876
No 63
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.27 E-value=0.0064 Score=55.30 Aligned_cols=229 Identities=12% Similarity=0.075 Sum_probs=113.9
Q ss_pred CCceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee-cCeEEEEEeecCCCCCCCCCcEEEeCCCCc
Q 016368 97 NSSMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV-RNNLVLIAATTPHFLPALASPLAFNPQSNT 175 (390)
Q Consensus 97 ~~~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~ 175 (390)
+....++.+|..++++..+.......... ..+.. ++.+|+..... ....+++||..+++
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~---------------~~a~spdg~l~~~~~~~-----~~~~v~~~~~~~g~ 74 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPT---------------YLALSAKDCLYSVDKED-----DEGGIAAWQIDGQT 74 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCC---------------CEEECTTCEEEEEEEET-----TEEEEEEEEEETTE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcc---------------eEEEccCCeEEEEEecC-----CCceEEEEEecCCc
Confidence 34566888898888876643221101100 22223 45544443221 12578899998887
Q ss_pred eecCCCCCCC-CcceEEEEE-CC-EEEEEeccCCCCCCCccCeEEEEECCC-CccccccEEcccCCC---C---Ccc-cc
Q 016368 176 WFFGPQLSIP-RRWCAMGSV-GG-VVYVASGVGAHYRGDVARSMKKWDLKS-DREDWKWEKKAQLKD---G---RFS-RE 244 (390)
Q Consensus 176 W~~~~~~~~~-r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~~~~~W~~~~~~~~---~---~~~-r~ 244 (390)
++.+...... ..-..++.. ++ .||+.+..+ ..+.+||... +. .+.+..... . +.. ..
T Consensus 75 ~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~--------~~v~v~~~~~~g~----~~~~~~~~~~~~~p~~~~~~~~ 142 (347)
T 3hfq_A 75 AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK--------GTAEVMKIAADGA----LTLTDTVQHSGHGPRPEQDGSH 142 (347)
T ss_dssp EEEEEEEEEESCCCSEEEEETTTTEEEEEETTT--------TEEEEEEECTTSC----EEEEEEEECCCCCSSTTCSSCC
T ss_pred EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC--------CEEEEEEeCCCCC----eeecceeecCCCCCCccccCCC
Confidence 7665442211 111223333 44 466665322 3677888753 33 333322211 0 000 00
Q ss_pred ceEEEE-ECCEEEEEcccCCCCceeEEEeCC-CCCeEecCCC-CCCCCCCceEEEeeCCe-EEEEeCCCCcEEEEECC--
Q 016368 245 AVEAVG-FKGNLCMVNLKGNGAKDGAIYNVE-LDKWKEMPEG-MHAGWNGPAASTMNEEE-LYVVNEGKGRLSKYDAD-- 318 (390)
Q Consensus 245 ~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~-~~~W~~~~~~-~~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd~~-- 318 (390)
.+.++. -+|++|+.+ .+...+.+||.. +++...+... .+.+.....++...+|+ ||+.+..++.+.+|+..
T Consensus 143 ~~~~~~spdg~l~v~~---~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVID---LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp EEEEEECTTSCEEEEE---TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred ceEEEECCCCcEEEEe---CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 122333 377777763 234567789987 5555543210 11111111233335676 78777767766666554
Q ss_pred CCceEEccccccc-------ccceeEEEE-CCE-EEEEeeCCceEEEEEcC
Q 016368 319 HDWWDEVIELAEL-------KGAEKITAA-RGR-VCAVCENGERIMVVDVL 360 (390)
Q Consensus 319 ~~~W~~i~~~p~~-------r~~~~~~~~-~g~-l~i~g~~~~~v~~~d~~ 360 (390)
+.++..+..+... .....++.. +|+ ||+.....+.+.+||+.
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 5666554432211 112234333 554 77776667788899876
No 64
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.26 E-value=0.0059 Score=55.51 Aligned_cols=197 Identities=9% Similarity=0.025 Sum_probs=101.7
Q ss_pred EEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccc
Q 016368 149 LVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDRED 227 (390)
Q Consensus 149 l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~ 227 (390)
.+++|.+.... ...-.++.+|+.+++++.+........-..++.. +++||+.+... ....+.+||+.++.
T Consensus 4 ~~~vg~y~~~~-~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~------~~~~v~~~~~~~g~-- 74 (347)
T 3hfq_A 4 RILFGTYTKKT-SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED------DEGGIAAWQIDGQT-- 74 (347)
T ss_dssp EEEEEECCSSS-CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET------TEEEEEEEEEETTE--
T ss_pred EEEEEeccCCC-CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC------CCceEEEEEecCCc--
Confidence 35556543221 1122367778888887664322211111223322 67888776432 12478999998877
Q ss_pred cccEEcccCCCCCccccceEEE-EECCE-EEEEcccCCCCceeEEEeCC-CCCeEecCCC-----CCCCC----CCceEE
Q 016368 228 WKWEKKAQLKDGRFSREAVEAV-GFKGN-LCMVNLKGNGAKDGAIYNVE-LDKWKEMPEG-----MHAGW----NGPAAS 295 (390)
Q Consensus 228 ~~W~~~~~~~~~~~~r~~~~~~-~~~g~-lyv~gg~g~~~~~~~~yd~~-~~~W~~~~~~-----~~~~~----~~~~~~ 295 (390)
++.+......... ...++ .-+|+ +|+.+ .....+.+||.. +++.+.+... .+..+ ....++
T Consensus 75 --~~~~~~~~~~~~~--p~~~a~spdg~~l~~~~---~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 147 (347)
T 3hfq_A 75 --AHKLNTVVAPGTP--PAYVAVDEARQLVYSAN---YHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTD 147 (347)
T ss_dssp --EEEEEEEEEESCC--CSEEEEETTTTEEEEEE---TTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEE
T ss_pred --EEEeeeeecCCCC--CEEEEECCCCCEEEEEe---CCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEE
Confidence 7666542211110 12233 33555 66652 123456788874 3344332210 01101 111233
Q ss_pred EeeCCeEEEEeCCCCcEEEEECC-CCceEEcccccc--cccceeEEEE-CCE-EEEEeeCCceEEEEEcCC
Q 016368 296 TMNEEELYVVNEGKGRLSKYDAD-HDWWDEVIELAE--LKGAEKITAA-RGR-VCAVCENGERIMVVDVLA 361 (390)
Q Consensus 296 ~~~~g~lyv~gg~~~~v~~yd~~-~~~W~~i~~~p~--~r~~~~~~~~-~g~-l~i~g~~~~~v~~~d~~~ 361 (390)
...+|++|+.+..++.+.+||.. +.+...+..... ......++.. +|+ +|+.+..++.+.+||+..
T Consensus 148 ~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 148 LTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 33578888887777789999988 555655443221 1122233333 555 787766677888887764
No 65
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.26 E-value=0.21 Score=50.98 Aligned_cols=146 Identities=13% Similarity=0.076 Sum_probs=92.1
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE--ECCEEEEEcccCCCC-ceeEEE
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG--FKGNLCMVNLKGNGA-KDGAIY 271 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~--~~g~lyv~gg~g~~~-~~~~~y 271 (390)
+++||+.-. ....|+++++.... -+.+..-.... ..++++ .+|.||+.- .+. ..++++
T Consensus 482 ~~~LY~tD~--------~~~~I~v~~ldG~~----~~~l~~~~l~~----P~gIaVDp~~g~LYwtD---~g~~~~I~~~ 542 (791)
T 3m0c_C 482 HSNIYWTDS--------VLGTVSVADTKGVK----RKTLFRENGSK----PRAIVVDPVHGFMYWTD---WGTPAKIKKG 542 (791)
T ss_dssp TTEEEEEET--------TTTEEEEEETTSSS----EEEEEECTTCC----EEEEEEETTTTEEEEEE---CSSSCEEEEE
T ss_pred CCcEEEEec--------CCCeEEEEeCCCCe----EEEEEeCCCCC----cceEEEecCCCCEEEec---CCCCCeEEEE
Confidence 679999743 34589999998765 44443211111 134554 368999982 222 568888
Q ss_pred eCCCCCeEecCCCCCCCCCCc-eEEE-eeCCeEEEEeCCCCcEEEEECCCCceEEcccc-cccccceeEEEECCEEEEEe
Q 016368 272 NVELDKWKEMPEGMHAGWNGP-AAST-MNEEELYVVNEGKGRLSKYDADHDWWDEVIEL-AELKGAEKITAARGRVCAVC 348 (390)
Q Consensus 272 d~~~~~W~~~~~~~~~~~~~~-~~~~-~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~-p~~r~~~~~~~~~g~l~i~g 348 (390)
++....=+.+.. .....+ ++++ ..+++||+.....+.|+++|+....=..+... ......+++++.+++||+.-
T Consensus 543 ~~dG~~~~~lv~---~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD 619 (791)
T 3m0c_C 543 GLNGVDIYSLVT---ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTD 619 (791)
T ss_dssp ETTSCCEEEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEE
T ss_pred ecCCCceEEEEe---CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEE
Confidence 887654433322 111222 3443 14799999998788999999986543343321 22345568888999999986
Q ss_pred eCCceEEEEEcCCC
Q 016368 349 ENGERIMVVDVLAS 362 (390)
Q Consensus 349 ~~~~~v~~~d~~~~ 362 (390)
...+.|+.+|..+.
T Consensus 620 ~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 620 IINEAIFSANRLTG 633 (791)
T ss_dssp TTTTEEEEEETTTC
T ss_pred CCCCEEEEEeCCCC
Confidence 66778999997655
No 66
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.23 E-value=0.012 Score=52.53 Aligned_cols=180 Identities=9% Similarity=0.037 Sum_probs=94.2
Q ss_pred CcEEEeCCCCceecC-CCCCC--CCc-ceEEEEE-CCEEEEEeccCCC-------CCCCccCeEEEEECCCCccccccEE
Q 016368 165 SPLAFNPQSNTWFFG-PQLSI--PRR-WCAMGSV-GGVVYVASGVGAH-------YRGDVARSMKKWDLKSDREDWKWEK 232 (390)
Q Consensus 165 ~~~~~dp~t~~W~~~-~~~~~--~r~-~~~~~~~-~~~lyv~GG~~~~-------~~~~~~~~~~~yd~~t~~~~~~W~~ 232 (390)
.+++||+. ++...+ ..... +.. -..++.. +++||+....... ........+++||+. ++ .+.
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~----~~~ 166 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ----MIQ 166 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC----EEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC----EEE
Confidence 68999998 777655 32211 111 1233332 6788887543210 001123478889887 55 444
Q ss_pred ccc-CCCCCccccceEEEEE-----CC-EEEEEcccCCCCceeEEEeCC-CCCe------EecCCCCCCCCCCceEEEee
Q 016368 233 KAQ-LKDGRFSREAVEAVGF-----KG-NLCMVNLKGNGAKDGAIYNVE-LDKW------KEMPEGMHAGWNGPAASTMN 298 (390)
Q Consensus 233 ~~~-~~~~~~~r~~~~~~~~-----~g-~lyv~gg~g~~~~~~~~yd~~-~~~W------~~~~~~~~~~~~~~~~~~~~ 298 (390)
+.. ... ....+.. ++ .+|+.. .....+.+||+. +++. ..++... . .....++...
T Consensus 167 ~~~~~~~------~~~i~~~~~~d~dg~~l~v~~---~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~-~-~~p~~i~~d~ 235 (314)
T 1pjx_A 167 VDTAFQF------PNGIAVRHMNDGRPYQLIVAE---TPTKKLWSYDIKGPAKIENKKVWGHIPGTH-E-GGADGMDFDE 235 (314)
T ss_dssp EEEEESS------EEEEEEEECTTSCEEEEEEEE---TTTTEEEEEEEEETTEEEEEEEEEECCCCS-S-CEEEEEEEBT
T ss_pred eccCCCC------cceEEEecccCCCCCEEEEEE---CCCCeEEEEECCCCCccccceEEEECCCCC-C-CCCCceEECC
Confidence 321 111 1333333 34 477762 123557788875 3433 2222100 0 1112333334
Q ss_pred CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCE-EEEEeeCCceEEEEEcCCC
Q 016368 299 EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR-VCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~-l~i~g~~~~~v~~~d~~~~ 362 (390)
+|.||+.....+.+.+||+++.+.......+. ....+++.. +|+ ||+.....+.++.+|+...
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF-EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TCCEEEEEETTTEEEEECTTCBSCSEEEECSS-SCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC-CCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 78999887667789999998544322222221 223334432 555 8887655678999998765
No 67
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.22 E-value=0.062 Score=49.83 Aligned_cols=106 Identities=10% Similarity=-0.028 Sum_probs=60.3
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe-EEEEeCCCCcEEEEECCCCceEEcccccc
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE-LYVVNEGKGRLSKYDADHDWWDEVIELAE 330 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd~~~~~W~~i~~~p~ 330 (390)
++++.+.|+ ....+.+||+.+.+-..... ........+++...++. +++.|+.++.+..||..+..- .+..+..
T Consensus 258 ~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~-~~~~~~~ 332 (420)
T 3vl1_A 258 YGKYVIAGH---VSGVITVHNVFSKEQTIQLP-SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC-PVGEFLI 332 (420)
T ss_dssp TTEEEEEEE---TTSCEEEEETTTCCEEEEEC-CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEEE
T ss_pred CCCEEEEEc---CCCeEEEEECCCCceeEEcc-cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC-chhhhhc
Confidence 566666642 22347789987765322211 11111122233224565 888888899999999987532 1111111
Q ss_pred -cc-cceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 331 -LK-GAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 331 -~r-~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.. ....+...++++++.++.+..+.+||+...
T Consensus 333 ~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 333 NEGTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp STTSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred cCCCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 11 122344457888888777889999998773
No 68
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.21 E-value=0.12 Score=47.17 Aligned_cols=174 Identities=11% Similarity=0.042 Sum_probs=104.8
Q ss_pred CCCcEEEeCCCCceecCC--CCCCCCcceEEEE--ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCC
Q 016368 163 LASPLAFNPQSNTWFFGP--QLSIPRRWCAMGS--VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKD 238 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~--~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~ 238 (390)
.+.++++++.....+.+. .+..| .++++ .++.||+.-.. ...++++++.... -+.+..-..
T Consensus 94 ~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~ly~~d~~--------~~~I~~~~~dG~~----~~~l~~~~l 158 (349)
T 3v64_C 94 LDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG--------TSRIEVANLDGAH----RKVLLWQSL 158 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCC---CEEEEETTTTEEEEEETT--------TTEEEEEETTSCS----CEEEECTTC
T ss_pred CCceEEEecCCCCceEEEeCCCCCc---cEEEEecCCCeEEEEcCC--------CCeEEEEcCCCCc----eEEEEeCCC
Confidence 357889998876544432 12122 23444 37899987432 3488999987655 333322111
Q ss_pred CCccccceEEEEE--CCEEEEEcccCCCC-ceeEEEeCCCCCeEecCCCCCCCCCCc-eEEEe-eCCeEEEEeCCCCcEE
Q 016368 239 GRFSREAVEAVGF--KGNLCMVNLKGNGA-KDGAIYNVELDKWKEMPEGMHAGWNGP-AASTM-NEEELYVVNEGKGRLS 313 (390)
Q Consensus 239 ~~~~r~~~~~~~~--~g~lyv~gg~g~~~-~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~-~~g~lyv~gg~~~~v~ 313 (390)
.. ..++++. ++.||+.. .+. ..++++++....-+.+.. .....+ ++++. .+++||+.....+.|+
T Consensus 159 ~~----P~~iavdp~~g~ly~td---~~~~~~I~r~~~dG~~~~~~~~---~~~~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 159 EK----PRAIALHPMEGTIYWTD---WGNTPRIEASSMDGSGRRIIAD---THLFWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp SC----EEEEEEETTTTEEEEEE---CSSSCEEEEEETTSCSCEESCC---SSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CC----cceEEEecCcCeEEEec---cCCCCEEEEEeCCCCCcEEEEE---CCCCCcceEEEeCCCCEEEEEECCCCEEE
Confidence 11 1344544 78999983 233 668889887654444322 111222 34432 3789999998888999
Q ss_pred EEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 314 KYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 314 ~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++|+....=..+.... .....++++.++.||+.-...+.|..+|..+.
T Consensus 229 ~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 229 RANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 9998864333332211 23456788889999998666778999985443
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.21 E-value=0.042 Score=49.87 Aligned_cols=193 Identities=12% Similarity=0.070 Sum_probs=103.1
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcc-eEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRW-CAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKS 223 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 223 (390)
++.++++++. -..+.+||..++++..+..+...... .+++.. ++++++.|+.+. .+.+||..+
T Consensus 19 ~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~ 83 (372)
T 1k8k_C 19 DRTQIAICPN-------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR--------NAYVWTLKG 83 (372)
T ss_dssp TSSEEEEECS-------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS--------CEEEEEEET
T ss_pred CCCEEEEEeC-------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC--------eEEEEECCC
Confidence 3455655533 25789999988876555444322222 223333 566667776553 688899988
Q ss_pred CccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCC-eEecCCC-CCCCCCCceEEEeeCC
Q 016368 224 DREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDK-WKEMPEG-MHAGWNGPAASTMNEE 300 (390)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~-W~~~~~~-~~~~~~~~~~~~~~~g 300 (390)
+. +.....+...... ..+++.. +++.++.|+ ....+.+||..+.. |...... .+.......+....++
T Consensus 84 ~~----~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~---~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 84 RT----WKPTLVILRINRA--ARCVRWAPNEKKFAVGS---GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp TE----EEEEEECCCCSSC--EEEEEECTTSSEEEEEE---TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred Ce----eeeeEEeecCCCc--eeEEEECCCCCEEEEEe---CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 87 6654332211110 1223322 555555542 22346677776553 3332220 1111112233322478
Q ss_pred eEEEEeCCCCcEEEEECCCC----------------ceEEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 301 ELYVVNEGKGRLSKYDADHD----------------WWDEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 301 ~lyv~gg~~~~v~~yd~~~~----------------~W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+++.++.++.+..||.... .-..+..+....... .+... ++..++.++.++.+.+||+.+.
T Consensus 155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 88888988999999996421 112222222222222 23332 5667777677789999999765
No 70
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.012 Score=54.47 Aligned_cols=186 Identities=9% Similarity=-0.002 Sum_probs=96.0
Q ss_pred eecCeEEEEEeecCCCCCCCCCcEEEeCCCCceec-CCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEEC
Q 016368 144 GVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFF-GPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDL 221 (390)
Q Consensus 144 ~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~-~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~ 221 (390)
...++.+++++. -..+.+||..+++-.. +... ...-.+++.. ++++++.|+.+. .+.+||.
T Consensus 214 ~~~~~~~~~~~~-------~g~i~~~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d~--------~i~i~d~ 276 (425)
T 1r5m_A 214 WVDDDKFVIPGP-------KGAIFVYQITEKTPTGKLIGH--HGPISVLEFNDTNKLLLSASDDG--------TLRIWHG 276 (425)
T ss_dssp EEETTEEEEECG-------GGCEEEEETTCSSCSEEECCC--SSCEEEEEEETTTTEEEEEETTS--------CEEEECS
T ss_pred EcCCCEEEEEcC-------CCeEEEEEcCCCceeeeeccC--CCceEEEEECCCCCEEEEEcCCC--------EEEEEEC
Confidence 344566666654 2468899988763221 1111 1111222333 566666666543 6788998
Q ss_pred CCCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC
Q 016368 222 KSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE 300 (390)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g 300 (390)
.+.. -...-...... ..+++.. ++ +++.++ ....+.+||..+.+-...-. . .......++...++
T Consensus 277 ~~~~----~~~~~~~~~~~----i~~~~~~~~~-~l~~~~---~d~~i~i~d~~~~~~~~~~~-~-~~~~i~~~~~s~~~ 342 (425)
T 1r5m_A 277 GNGN----SQNCFYGHSQS----IVSASWVGDD-KVISCS---MDGSVRLWSLKQNTLLALSI-V-DGVPIFAGRISQDG 342 (425)
T ss_dssp SSBS----CSEEECCCSSC----EEEEEEETTT-EEEEEE---TTSEEEEEETTTTEEEEEEE-C-TTCCEEEEEECTTS
T ss_pred CCCc----cceEecCCCcc----EEEEEECCCC-EEEEEe---CCCcEEEEECCCCcEeEecc-c-CCccEEEEEEcCCC
Confidence 8765 22111111111 1334433 45 444421 23457789987764322211 1 11111223322568
Q ss_pred eEEEEeCCCCcEEEEECCCCc------------------eEEccccccccc--ce-eEEEE-CCEEEEEeeCCceEEEEE
Q 016368 301 ELYVVNEGKGRLSKYDADHDW------------------WDEVIELAELKG--AE-KITAA-RGRVCAVCENGERIMVVD 358 (390)
Q Consensus 301 ~lyv~gg~~~~v~~yd~~~~~------------------W~~i~~~p~~r~--~~-~~~~~-~g~l~i~g~~~~~v~~~d 358 (390)
.+++.++.++.+..||..+.. ...+..+..... .. .+... +++.++.++.++.+.+||
T Consensus 343 ~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 422 (425)
T 1r5m_A 343 QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVA 422 (425)
T ss_dssp SEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEE
T ss_pred CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEe
Confidence 888888888999999987544 112233332221 22 33333 566666767777899998
Q ss_pred cC
Q 016368 359 VL 360 (390)
Q Consensus 359 ~~ 360 (390)
+.
T Consensus 423 ~~ 424 (425)
T 1r5m_A 423 IP 424 (425)
T ss_dssp CC
T ss_pred ec
Confidence 75
No 71
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.14 E-value=0.041 Score=48.96 Aligned_cols=174 Identities=11% Similarity=0.021 Sum_probs=92.3
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcc-eEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRW-CAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+.+||..+++....-. ..... .+++.. ++++++.|+.+. .+.+||..+.. -...-......
T Consensus 45 g~i~iw~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~~~d~--------~i~vwd~~~~~----~~~~~~~~~~~- 109 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTIS--GHKLGISDVAWSSDSNLLVSASDDK--------TLKIWDVSSGK----CLKTLKGHSNY- 109 (312)
T ss_dssp SCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCC----EEEEEECCSSC-
T ss_pred CeEEEEeCCCcccchhhc--cCCCceEEEEEcCCCCEEEEECCCC--------EEEEEECCCCc----EEEEEcCCCCC-
Confidence 357888888776543211 11111 122222 566777776654 78899998876 22211111111
Q ss_pred cccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEe-cCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCC
Q 016368 242 SREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADH 319 (390)
Q Consensus 242 ~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~ 319 (390)
..+++. -++.+++.|+ ....+.+||+.+.+-.. +.. .......+....++.+++.++.++.+..||..+
T Consensus 110 ---v~~~~~~~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 110 ---VFCCNFNPQSNLIVSGS---FDESVRIWDVKTGKCLKTLPA---HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp ---EEEEEECSSSSEEEEEE---TTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred ---EEEEEEcCCCCEEEEEe---CCCcEEEEECCCCEEEEEecC---CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 122222 2455555532 23457789988765322 211 111111222224788888999999999999987
Q ss_pred CceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 320 DWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 320 ~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+-....... .........+ +++.++.++.++.+.+||+.+.
T Consensus 181 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 181 GQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp CCEEEEECCS-SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred CceeeEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 6543221111 1111222222 5667777777778999998764
No 72
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.05 Score=49.11 Aligned_cols=179 Identities=14% Similarity=0.118 Sum_probs=91.4
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcce-EEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWC-AMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+.+||..+++-... +....... +++.. +++.++.|+.+. .+.+||..+.. -...-.....
T Consensus 54 g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~~----~~~~~~~~~~-- 117 (369)
T 3zwl_B 54 SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSADY--------SIKLWDVSNGQ----CVATWKSPVP-- 117 (369)
T ss_dssp SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTT--------EEEEEETTTCC----EEEEEECSSC--
T ss_pred CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCc----EEEEeecCCC--
Confidence 4688999887654321 11111112 22222 466666766653 78899998876 3332222211
Q ss_pred cccceEEEE-ECCEEEEEcccC--CCCceeEEEeCCCCC----eEecCCC----C-CCCC--CCceEEEeeCCeEEEEeC
Q 016368 242 SREAVEAVG-FKGNLCMVNLKG--NGAKDGAIYNVELDK----WKEMPEG----M-HAGW--NGPAASTMNEEELYVVNE 307 (390)
Q Consensus 242 ~r~~~~~~~-~~g~lyv~gg~g--~~~~~~~~yd~~~~~----W~~~~~~----~-~~~~--~~~~~~~~~~g~lyv~gg 307 (390)
..+++. -+++.++.++.. .....+.+||..+.. +...... . .... ....++...+++.+++++
T Consensus 118 ---v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 118 ---VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp ---EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred ---eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 122222 255555553221 011345667765432 2211110 0 0000 111222235678888888
Q ss_pred CCCcEEEEECCCCceEEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 308 GKGRLSKYDADHDWWDEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 308 ~~~~v~~yd~~~~~W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.++.+..||..+. ...+..+....... .+... ++..++.++.+..+.+||+.+.
T Consensus 195 ~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 195 KDGKISKYDVSNN-YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp TTSEEEEEETTTT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEEECCCC-cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 8999999999863 22222222222222 33333 6777777777789999999875
No 73
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.12 E-value=0.16 Score=46.90 Aligned_cols=189 Identities=7% Similarity=-0.018 Sum_probs=97.4
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
++.+++.|+. -..+.+||..+++-...-... ...-.+++.. ++++++.|+.+. .+.+||..+.
T Consensus 108 ~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~s~d~--------~i~iwd~~~~ 171 (420)
T 3vl1_A 108 QMRRFILGTT-------EGDIKVLDSNFNLQREIDQAH-VSEITKLKFFPSGEALISSSQDM--------QLKIWSVKDG 171 (420)
T ss_dssp SSCEEEEEET-------TSCEEEECTTSCEEEEETTSS-SSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTC
T ss_pred CCCEEEEEEC-------CCCEEEEeCCCcceeeecccc-cCccEEEEECCCCCEEEEEeCCC--------eEEEEeCCCC
Confidence 4556666543 246889998877544321111 1111222222 566666666654 7889999876
Q ss_pred ccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEe-cCCCCCCCCCCc----------
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGMHAGWNGP---------- 292 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~---------- 292 (390)
.. -..+..-. .. -.+++.. +++.++.|+ ....+.+||..+.+-.. +.. ........
T Consensus 172 ~~---~~~~~~h~-~~----v~~~~~~~~~~~l~s~~---~d~~v~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~ 239 (420)
T 3vl1_A 172 SN---PRTLIGHR-AT----VTDIAIIDRGRNVLSAS---LDGTIRLWECGTGTTIHTFNR-KENPHDGVNSIALFVGTD 239 (420)
T ss_dssp CC---CEEEECCS-SC----EEEEEEETTTTEEEEEE---TTSCEEEEETTTTEEEEEECB-TTBTTCCEEEEEEEECCC
T ss_pred cC---ceEEcCCC-Cc----EEEEEEcCCCCEEEEEc---CCCcEEEeECCCCceeEEeec-CCCCCCCccEEEEecCCc
Confidence 51 11221111 11 1233333 555555532 23446788887664222 111 00000000
Q ss_pred ------------eEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCE-EEEEeeCCceEEEEE
Q 016368 293 ------------AASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR-VCAVCENGERIMVVD 358 (390)
Q Consensus 293 ------------~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~-l~i~g~~~~~v~~~d 358 (390)
.++...++++++.|+.++.+..||..+..-.............++... ++. +++.|+.+..+.+||
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd 319 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWD 319 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred ceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 011114788888998899999999987642221111111112233333 454 777777788999999
Q ss_pred cCCC
Q 016368 359 VLAS 362 (390)
Q Consensus 359 ~~~~ 362 (390)
+.+.
T Consensus 320 ~~~~ 323 (420)
T 3vl1_A 320 LRSP 323 (420)
T ss_dssp TTCT
T ss_pred cCCC
Confidence 9875
No 74
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.11 E-value=0.12 Score=47.19 Aligned_cols=174 Identities=12% Similarity=0.029 Sum_probs=102.3
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
+.+.++++.......+.+- ...-.+++.. ++.||+.-- ....+.++++.+.. -+.+........
T Consensus 53 ~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~--------~~~~I~r~~~~g~~----~~~~~~~~~~~p 118 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV--------TLDRILRANLNGSN----VEEVVSTGLESP 118 (349)
T ss_dssp SCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEET--------TTTEEEEEETTSCS----CEEEECSSCSCC
T ss_pred cceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEec--------cCCceEEEecCCCC----ceEEEeCCCCCc
Confidence 4577888877666543221 1122333433 688998732 33578999998776 555433221111
Q ss_pred cccceEEEE--ECCEEEEEcccCCCCceeEEEeCCCCCeEecCC-CCCCCCCCceEEEe-eCCeEEEEeCCC-CcEEEEE
Q 016368 242 SREAVEAVG--FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPE-GMHAGWNGPAASTM-NEEELYVVNEGK-GRLSKYD 316 (390)
Q Consensus 242 ~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~-~~g~lyv~gg~~-~~v~~yd 316 (390)
.+.++ .+++||+.- .+...+.++++....-+.+.. .+..+ ..+++. .+|.||+..... +.|++++
T Consensus 119 ----~glavd~~~g~ly~~d---~~~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 119 ----GGLAVDWVHDKLYWTD---SGTSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp ----CEEEEETTTTEEEEEE---TTTTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ----cEEEEecCCCeEEEEc---CCCCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 33444 478999982 234568889887654333321 11111 234431 378999998766 7999999
Q ss_pred CCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 317 ADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 317 ~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+....-+.+.. .......++++- +++||+.-.....|..+|+...
T Consensus 189 ~dG~~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 189 MDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp TTSCSCEESCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCCcEEEEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 98654444432 112234456654 7889998555668888887654
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.08 E-value=0.075 Score=49.23 Aligned_cols=192 Identities=10% Similarity=0.033 Sum_probs=99.4
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceec-----CCCCCCCCcce-EEEEE-CC-EEEEEeccCCCCCCCccCeEE
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFF-----GPQLSIPRRWC-AMGSV-GG-VVYVASGVGAHYRGDVARSMK 217 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~-----~~~~~~~r~~~-~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~ 217 (390)
++.+++.++. -..+.+||..++.... +..+....... +++.. ++ .+++.|+.+. .+.
T Consensus 93 ~~~~l~s~s~-------dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--------~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSE-------DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN--------VIL 157 (402)
T ss_dssp CTTEEEEEET-------TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS--------CEE
T ss_pred CCCEEEEEeC-------CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC--------EEE
Confidence 3456666643 1468889988775422 11111111112 22222 33 4777776654 688
Q ss_pred EEECCCCccccccEEccc-CCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecC-CCCCCCCCCceE
Q 016368 218 KWDLKSDREDWKWEKKAQ-LKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMP-EGMHAGWNGPAA 294 (390)
Q Consensus 218 ~yd~~t~~~~~~W~~~~~-~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~ 294 (390)
+||..++. ....-. ...... ..+++.. ++++++.|+ ....+.+||+.+.+-...- . .........+
T Consensus 158 iwd~~~~~----~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~ 226 (402)
T 2aq5_A 158 VWDVGTGA----AVLTLGPDVHPDT---IYSVDWSRDGALICTSC---RDKRVRVIEPRKGTVVAEKDR-PHEGTRPVHA 226 (402)
T ss_dssp EEETTTTE----EEEEECTTTCCSC---EEEEEECTTSSCEEEEE---TTSEEEEEETTTTEEEEEEEC-SSCSSSCCEE
T ss_pred EEECCCCC----ccEEEecCCCCCc---eEEEEECCCCCEEEEEe---cCCcEEEEeCCCCceeeeecc-CCCCCcceEE
Confidence 99998876 432211 111111 1333332 566555532 2345778999876533221 1 1122112233
Q ss_pred EEeeCCeEEEEe---CCCCcEEEEECCCCce-EEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCCC
Q 016368 295 STMNEEELYVVN---EGKGRLSKYDADHDWW-DEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 295 ~~~~~g~lyv~g---g~~~~v~~yd~~~~~W-~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
+...++++++.| +.++.+..||..+..- .....+........+... +..|++.|..+..|.+||+.+..
T Consensus 227 ~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 227 VFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred EEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 333678888888 6778999999886432 111112222222333333 34555666567789999988763
No 76
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.08 E-value=0.16 Score=45.82 Aligned_cols=183 Identities=13% Similarity=0.089 Sum_probs=96.5
Q ss_pred CCcEEEeCCCC--ceecCCCC------CCCCcce-EEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEE
Q 016368 164 ASPLAFNPQSN--TWFFGPQL------SIPRRWC-AMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEK 232 (390)
Q Consensus 164 ~~~~~~dp~t~--~W~~~~~~------~~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~ 232 (390)
+.+.+||+... .-..+... ....... .+++. ++.|||..++. ...+.+||+.... -..
T Consensus 112 ~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-------~~~I~~~~~~g~~----~~~ 180 (329)
T 3fvz_A 112 HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-------NSRIVQFSPSGKF----VTQ 180 (329)
T ss_dssp TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-------CCEEEEECTTSCE----EEE
T ss_pred CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-------CCeEEEEcCCCCE----EEE
Confidence 57889998655 22222211 0111122 34443 57899987532 2378899965443 233
Q ss_pred cccCCCC------CccccceEEEEE-C-CEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEE
Q 016368 233 KAQLKDG------RFSREAVEAVGF-K-GNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYV 304 (390)
Q Consensus 233 ~~~~~~~------~~~r~~~~~~~~-~-g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv 304 (390)
+...... ... ...++++. + +.+|+.. .+...+.+||+.+++....-.....+.....++. ..+.+|.
T Consensus 181 ~~~~g~~~~~~~~~~~-~p~gia~d~~~g~l~v~d---~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~pg~~~~ 255 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFS-VPHSLALVPHLDQLCVAD---RENGRIQCFKTDTKEFVREIKHASFGRNVFAISY-IPGFLFA 255 (329)
T ss_dssp ECEECCSSSCCTTEES-CEEEEEEETTTTEEEEEE---TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEE-ETTEEEE
T ss_pred eccCCCCCCCCCcccC-CCcEEEEECCCCEEEEEE---CCCCEEEEEECCCCcEEEEEeccccCCCcceeee-cCCEEEE
Confidence 3211110 000 01444443 4 8999983 3456688999987665442210111111112222 2244444
Q ss_pred EeC-------CCCcEEEEECCCCceEEcc-ccc-ccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 305 VNE-------GKGRLSKYDADHDWWDEVI-ELA-ELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 305 ~gg-------~~~~v~~yd~~~~~W~~i~-~~p-~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
..| ....+.+||..+.+....- ..+ ......+++.. +|.|||....++.|.+|++...
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 444 3448999998877655432 111 22234455554 6789998777779999998654
No 77
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.07 E-value=0.058 Score=48.88 Aligned_cols=178 Identities=10% Similarity=0.071 Sum_probs=93.5
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
..+.+||..+.+-...-+.... .-.+++.. ++++++.||.+. .+.+||..+.... .+....+......
T Consensus 77 g~v~iWd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d~--------~v~iw~~~~~~~~--~~~~~~~~~h~~~ 145 (340)
T 1got_B 77 GKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNYVACGGLDN--------ICSIYNLKTREGN--VRVSRELAGHTGY 145 (340)
T ss_dssp TEEEEEETTTCCEEEEEECSSS-CEEEEEECTTSSEEEEEETTC--------EEEEEETTTCSBS--CEEEEEEECCSSC
T ss_pred CcEEEEECCCCCcceEeecCCc-cEEEEEECCCCCEEEEEeCCC--------eEEEEECccCCCc--ceeEEEecCCCcc
Confidence 4688889877643221111111 11122222 566677777654 6788998765310 2222211111000
Q ss_pred ccceEEE-EECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc
Q 016368 243 REAVEAV-GFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 243 r~~~~~~-~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
-.++. .-+++++..+ ....+.+||+.+.+-...-. .......+++...++.+++.|+.++.+..||..+..
T Consensus 146 --v~~~~~~~~~~l~s~s----~d~~i~~wd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~ 217 (340)
T 1got_B 146 --LSCCRFLDDNQIVTSS----GDTTCALWDIETGQQTTTFT--GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217 (340)
T ss_dssp --EEEEEEEETTEEEEEE----TTSCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred --EEEEEECCCCcEEEEE----CCCcEEEEECCCCcEEEEEc--CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe
Confidence 12222 2356654443 34557789988765332111 011111223323578899999999999999998754
Q ss_pred eEEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 322 WDEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 322 W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
-.. .+....... +++.. ++..++.|+.+..+.+||+...
T Consensus 218 ~~~--~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 218 CRQ--TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp EEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred eEE--EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 322 222222222 23333 6777788787889999998764
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.06 E-value=0.025 Score=51.44 Aligned_cols=221 Identities=10% Similarity=0.034 Sum_probs=110.5
Q ss_pred eeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee--cCeEEEEEeecCCCCCCCCCcEEEeCCCCcee
Q 016368 100 MEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV--RNNLVLIAATTPHFLPALASPLAFNPQSNTWF 177 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~ 177 (390)
..+.+||..++++..+..+.. ... ...++.. ++..++.++. -..+.+||..++++.
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~-h~~--------------~v~~~~~~~~~~~l~~~~~-------dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKE-HNG--------------QVTGVDWAPDSNRIVTCGT-------DRNAYVWTLKGRTWK 87 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEEC-CSS--------------CEEEEEEETTTTEEEEEET-------TSCEEEEEEETTEEE
T ss_pred CEEEEEeCCCCcEEeeeeecC-CCC--------------cccEEEEeCCCCEEEEEcC-------CCeEEEEECCCCeee
Confidence 357778887776544433332 110 0123322 3456666543 246889999888765
Q ss_pred cCCCCCCCCcce-EEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-CCE
Q 016368 178 FGPQLSIPRRWC-AMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGN 254 (390)
Q Consensus 178 ~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~ 254 (390)
....+....... ++... +++.++.|+.+. .+.+||..+... |............ ...+++.. +++
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~v~i~d~~~~~~---~~~~~~~~~~~~~-~i~~~~~~~~~~ 155 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNEKKFAVGSGSR--------VISICYFEQEND---WWVCKHIKKPIRS-TVLSLDWHPNSV 155 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEETTS--------SEEEEEEETTTT---EEEEEEECTTCCS-CEEEEEECTTSS
T ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCCC--------EEEEEEecCCCc---ceeeeeeecccCC-CeeEEEEcCCCC
Confidence 433222112222 22222 566666666543 567777766541 3333222111110 01223322 566
Q ss_pred EEEEcccCCCCceeEEEeCCCC---------CeEe-------cCCCCC-CCCCCceEEEeeCCeEEEEeCCCCcEEEEEC
Q 016368 255 LCMVNLKGNGAKDGAIYNVELD---------KWKE-------MPEGMH-AGWNGPAASTMNEEELYVVNEGKGRLSKYDA 317 (390)
Q Consensus 255 lyv~gg~g~~~~~~~~yd~~~~---------~W~~-------~~~~~~-~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~ 317 (390)
.++.|+ ....+.+||.... .|.. +.. +. .......++...++..++.++.++.+..||.
T Consensus 156 ~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 231 (372)
T 1k8k_C 156 LLAAGS---CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE-SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 231 (372)
T ss_dssp EEEEEE---TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE-CCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG
T ss_pred EEEEEc---CCCCEEEEEcccccccccccccccccccchhhheEe-cCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 666642 2334678886421 1111 111 11 1111122222247778888888999999999
Q ss_pred CCCceEEcccccccccc-eeEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 318 DHDWWDEVIELAELKGA-EKITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 318 ~~~~W~~i~~~p~~r~~-~~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
.+.+-. ..+...... ..+... ++++++.| .++.+.+||+..
T Consensus 232 ~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 232 DKKMAV--ATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp GGTTEE--EEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCcee--EEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 865532 222222222 233333 67776665 677899999887
No 79
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.05 E-value=0.14 Score=45.63 Aligned_cols=146 Identities=8% Similarity=0.063 Sum_probs=76.5
Q ss_pred CEEEEEeccCCCCCCCccCeEEEEECCC-CccccccEEcc----cCCCCCccccceEEEE-ECCE-EEEEcccCCCCcee
Q 016368 196 GVVYVASGVGAHYRGDVARSMKKWDLKS-DREDWKWEKKA----QLKDGRFSREAVEAVG-FKGN-LCMVNLKGNGAKDG 268 (390)
Q Consensus 196 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~~~~~W~~~~----~~~~~~~~r~~~~~~~-~~g~-lyv~gg~g~~~~~~ 268 (390)
..||+.+..+ ..+.+||..+ +. ...+. ..+.... ...++. -+++ +|+.+ .....+
T Consensus 141 ~~l~~~~~~~--------~~v~~~d~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~pdg~~l~~~~---~~~~~i 202 (343)
T 1ri6_A 141 RTLWVPALKQ--------DRICLFTVSDDGH----LVAQDPAEVTTVEGAG---PRHMVFHPNEQYAYCVN---ELNSSV 202 (343)
T ss_dssp SEEEEEEGGG--------TEEEEEEECTTSC----EEEEEEEEEECSTTCC---EEEEEECTTSSEEEEEE---TTTTEE
T ss_pred CEEEEecCCC--------CEEEEEEecCCCc----eeeecccccccCCCCC---cceEEECCCCCEEEEEe---CCCCEE
Confidence 3577665333 3688999987 55 54332 1111111 122332 2454 66663 123457
Q ss_pred EEEeCC--CCCeEec---CCCCCCC---CCCc-eEEEeeCC-eEEEEeCCCCcEEEEECC--CCceEEccccccccccee
Q 016368 269 AIYNVE--LDKWKEM---PEGMHAG---WNGP-AASTMNEE-ELYVVNEGKGRLSKYDAD--HDWWDEVIELAELKGAEK 336 (390)
Q Consensus 269 ~~yd~~--~~~W~~~---~~~~~~~---~~~~-~~~~~~~g-~lyv~gg~~~~v~~yd~~--~~~W~~i~~~p~~r~~~~ 336 (390)
.+||.. +.++... .. .+.. .... .++...+| .||+.+..++.+.+||.. +.+++.+..++.......
T Consensus 203 ~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 281 (343)
T 1ri6_A 203 DVWELKDPHGNIECVQTLDM-MPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRG 281 (343)
T ss_dssp EEEESSCTTSCCEEEEEEEC-SCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCC
T ss_pred EEEEecCCCCcEEEEeeccc-cCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccce
Confidence 788884 3444322 21 2221 1111 23332345 577677677888999887 566777765554333334
Q ss_pred EEEE-CCE-EEEEeeCCceEEEEEcC
Q 016368 337 ITAA-RGR-VCAVCENGERIMVVDVL 360 (390)
Q Consensus 337 ~~~~-~g~-l~i~g~~~~~v~~~d~~ 360 (390)
++.. +|+ ||+.+...+.+.+|++.
T Consensus 282 ~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 282 FNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EEECCCCCEEEEecCCCCeEEEEEEc
Confidence 4444 444 66654455677777544
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.03 Score=50.91 Aligned_cols=195 Identities=6% Similarity=-0.006 Sum_probs=102.7
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE--C--CEEEEEeccCCCCCCCccCeEEEEECC
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--G--GVVYVASGVGAHYRGDVARSMKKWDLK 222 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~yd~~ 222 (390)
+.+++.++. -..+.+||..+++|..+..+...........+ + +.+++.|+.+. .+.+||..
T Consensus 69 ~~~l~s~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~--------~i~v~d~~ 133 (379)
T 3jrp_A 69 GTILASCSY-------DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG--------KVSVVEFK 133 (379)
T ss_dssp CSEEEEEET-------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS--------EEEEEECC
T ss_pred CCEEEEecc-------CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC--------cEEEEecC
Confidence 456666543 14688999999887665444332222223333 3 56777776654 78889988
Q ss_pred CCccccccEEcccCCCCCccccceEEEEE--------------CCEEEEEcccCCCCceeEEEeCCCCC--eEecCCCCC
Q 016368 223 SDREDWKWEKKAQLKDGRFSREAVEAVGF--------------KGNLCMVNLKGNGAKDGAIYNVELDK--WKEMPEGMH 286 (390)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~r~~~~~~~~--------------~g~lyv~gg~g~~~~~~~~yd~~~~~--W~~~~~~~~ 286 (390)
+... ............ ..+++.. ++.+++.|+. ...+.+||..+.. +..+.. +.
T Consensus 134 ~~~~---~~~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~-~~ 203 (379)
T 3jrp_A 134 ENGT---TSPIIIDAHAIG---VNSASWAPATIEEDGEHNGTKESRKFVTGGA---DNLVKIWKYNSDAQTYVLEST-LE 203 (379)
T ss_dssp TTSC---CCEEEEECCTTC---EEEEEECCCC----------CTTCEEEEEET---TSCEEEEEEETTTTEEEEEEE-EC
T ss_pred CCCc---eeeEEecCCCCc---eEEEEEcCccccccccccCCCCCCEEEEEeC---CCeEEEEEecCCCcceeeEEE-Ee
Confidence 7741 111111011100 1222222 3666666422 2346788876543 443332 21
Q ss_pred C-CCCCceEEEeeC---CeEEEEeCCCCcEEEEECCCCce--EE-cccccccccc-eeEEEE-CCEEEEEeeCCceEEEE
Q 016368 287 A-GWNGPAASTMNE---EELYVVNEGKGRLSKYDADHDWW--DE-VIELAELKGA-EKITAA-RGRVCAVCENGERIMVV 357 (390)
Q Consensus 287 ~-~~~~~~~~~~~~---g~lyv~gg~~~~v~~yd~~~~~W--~~-i~~~p~~r~~-~~~~~~-~g~l~i~g~~~~~v~~~ 357 (390)
. .....+++...+ +.+++.++.++.+..||..+... .. +......... ..+... +++.++.++.+..+.+|
T Consensus 204 ~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw 283 (379)
T 3jrp_A 204 GHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 283 (379)
T ss_dssp CCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEE
T ss_pred cccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 1 111123332244 78888999999999999887532 11 1111111222 233332 66666666777789999
Q ss_pred EcCCCCCcceE
Q 016368 358 DVLASPARAWL 368 (390)
Q Consensus 358 d~~~~~~~~W~ 368 (390)
|+... ..|.
T Consensus 284 ~~~~~--~~~~ 292 (379)
T 3jrp_A 284 KENLE--GKWE 292 (379)
T ss_dssp EEEET--TEEE
T ss_pred eCCCC--Cccc
Confidence 98754 2565
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.02 E-value=0.13 Score=48.39 Aligned_cols=186 Identities=8% Similarity=0.063 Sum_probs=96.0
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKW 219 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~y 219 (390)
.++..++..++.|+. -..+.+||..+.+-...-..... .-.+++.. ++..++.|+.+. .+.+|
T Consensus 274 ~~~~~~~~~l~~~~~-------d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~sg~~dg--------~i~vw 337 (464)
T 3v7d_B 274 RTVSGHGNIVVSGSY-------DNTLIVWDVAQMKCLYILSGHTD-RIYSTIYDHERKRCISASMDT--------TIRIW 337 (464)
T ss_dssp EEEEEETTEEEEEET-------TSCEEEEETTTTEEEEEECCCSS-CEEEEEEETTTTEEEEEETTS--------CEEEE
T ss_pred EEEcCCCCEEEEEeC-------CCeEEEEECCCCcEEEEecCCCC-CEEEEEEcCCCCEEEEEeCCC--------cEEEE
Confidence 344455666666653 24688999887653221111111 11222222 556666666654 68899
Q ss_pred ECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeC
Q 016368 220 DLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNE 299 (390)
Q Consensus 220 d~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 299 (390)
|..+.. - +..+..... ....+.+++...+.|+ ....+.+||+.+..-..... .......++...+
T Consensus 338 d~~~~~----~--~~~~~~h~~---~v~~~~~~~~~l~s~s---~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~ 402 (464)
T 3v7d_B 338 DLENGE----L--MYTLQGHTA---LVGLLRLSDKFLVSAA---ADGSIRGWDANDYSRKFSYH---HTNLSAITTFYVS 402 (464)
T ss_dssp ETTTTE----E--EEEECCCSS---CEEEEEECSSEEEEEE---TTSEEEEEETTTCCEEEEEE---CTTCCCEEEEEEC
T ss_pred ECCCCc----E--EEEEeCCCC---cEEEEEEcCCEEEEEe---CCCcEEEEECCCCceeeeec---CCCCccEEEEEeC
Confidence 998766 2 222211111 2334445666555531 23457789998764222111 1112222232378
Q ss_pred CeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCce--EEEEE
Q 016368 300 EELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGER--IMVVD 358 (390)
Q Consensus 300 g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~--v~~~d 358 (390)
+.+++.|+ ++.+..||.++.+-......+.......+...++.+++.+..+.. ++++|
T Consensus 403 ~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 403 DNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp SSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred CCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEEee
Confidence 88888877 789999999987655432222222223344446666665544432 34445
No 82
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.02 E-value=0.01 Score=55.65 Aligned_cols=179 Identities=11% Similarity=0.050 Sum_probs=95.3
Q ss_pred CcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccc
Q 016368 165 SPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSR 243 (390)
Q Consensus 165 ~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r 243 (390)
.++.+|+.+++++.+..++....-.+++.. ++++++.++.+. .+.+||+.++. ..............
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--------~i~~~d~~~g~----~~~~~~~~~~~~~~ 169 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDE--------GMDVLDINSGQ----TVRLSPPEKYKKKL 169 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSS--------SEEEEETTTCC----EEEECCCHHHHTTC
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCC--------eEEEEECCCCe----EeeecCcccccccC
Confidence 688888877766555444333222233333 678888776543 68999999887 44432211100000
Q ss_pred cceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC-eEEEEeCCCCcEEEEECCCC
Q 016368 244 EAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE-ELYVVNEGKGRLSKYDADHD 320 (390)
Q Consensus 244 ~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd~~~~ 320 (390)
.....+.+ ++++++.++ ....+.+||+.+.+-...-. . .......++...++ .+|+.+..++.+.+||..+.
T Consensus 170 ~~v~~~~~~~~~~~~~s~~---~d~~v~~~d~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~ 244 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQM---QANAVHVFDLKTLAYKATVD-L-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTK 244 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEG---GGTEEEEEETTTCCEEEEEE-C-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred CceeEEEEcCCCEEEEEEC---CCCEEEEEECCCceEEEEEc-C-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCC
Confidence 01222223 778887742 23457789998765432211 0 11111223322344 56677767889999999877
Q ss_pred ceEEcccccccccceeEEEE-CC-EEEEEee-------CCceEEEEEcCCC
Q 016368 321 WWDEVIELAELKGAEKITAA-RG-RVCAVCE-------NGERIMVVDVLAS 362 (390)
Q Consensus 321 ~W~~i~~~p~~r~~~~~~~~-~g-~l~i~g~-------~~~~v~~~d~~~~ 362 (390)
+..... +.......+... +| .|++.+. .+..+.+||+.+.
T Consensus 245 ~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 245 LEIRKT--DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEEEEC--CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred cEEEEe--cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 553332 222223334443 45 4555432 2458889998765
No 83
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.99 E-value=0.032 Score=50.87 Aligned_cols=231 Identities=15% Similarity=0.154 Sum_probs=111.4
Q ss_pred CCceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCc--EEEeCCCC
Q 016368 97 NSSMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASP--LAFNPQSN 174 (390)
Q Consensus 97 ~~~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~--~~~dp~t~ 174 (390)
+....++.+|+.+++...+..... .... + .+..-+++.++++..... ....+ |.++..++
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~-~~p~-------~-------l~~spdg~~l~~~~~~~~---~~~~v~~~~~~~~~g 87 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEV-ANPS-------Y-------LIPSADGKFVYSVNEFSK---DQAAVSAFAFDKEKG 87 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEEC-SCCC-------S-------EEECTTSSEEEEEECCSS---TTCEEEEEEEETTTT
T ss_pred CCCEEEEEEeCCCCCEEEeecccC-CCCc-------e-------EEECCCCCEEEEEEccCC---CCCcEEEEEEeCCCC
Confidence 345667888888888876654311 1110 0 222234555555543211 12345 44566667
Q ss_pred ceecCCCCCCCCcc-eEEEEECCE-EEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc-------CCCC-C-ccc
Q 016368 175 TWFFGPQLSIPRRW-CAMGSVGGV-VYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ-------LKDG-R-FSR 243 (390)
Q Consensus 175 ~W~~~~~~~~~r~~-~~~~~~~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~-------~~~~-~-~~r 243 (390)
+.+.+...+..-.. ...+. +++ ||+.+..+ ..+.+|+..++.. ...+.. -+.+ + ...
T Consensus 88 ~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~--------~~v~~~~~~~~g~---~~~~~~~~~~~g~~~~~~~~~~~ 155 (361)
T 3scy_A 88 TLHLLNTQKTMGADPCYLTT-NGKNIVTANYSG--------GSITVFPIGQDGA---LLPASDVIEFKGSGPDKERQTMP 155 (361)
T ss_dssp EEEEEEEEECSSSCEEEEEE-CSSEEEEEETTT--------TEEEEEEBCTTSC---BCSCSEEEECCCCCSCTTTCSSC
T ss_pred cEEEeeEeccCCCCcEEEEE-CCCEEEEEECCC--------CEEEEEEeCCCCc---CcccceeEEccCCCCCccccCCC
Confidence 77665544322222 22333 554 66654322 3678888865431 111110 0100 0 000
Q ss_pred cceEEEE-ECCE-EEEEcccCCCCceeEEEeCCCCC-------eEec---CC-CCCCCCCCceEEEeeCCe-EEEEeCCC
Q 016368 244 EAVEAVG-FKGN-LCMVNLKGNGAKDGAIYNVELDK-------WKEM---PE-GMHAGWNGPAASTMNEEE-LYVVNEGK 309 (390)
Q Consensus 244 ~~~~~~~-~~g~-lyv~gg~g~~~~~~~~yd~~~~~-------W~~~---~~-~~~~~~~~~~~~~~~~g~-lyv~gg~~ 309 (390)
..++++. -+|+ +|+.+ .+...+.+|+..... .... .. ..+.......++...+|+ ||+.+..+
T Consensus 156 ~~~~~~~spdg~~l~~~~---~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 232 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADD---LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG 232 (361)
T ss_dssp CEEEEEECTTSSEEEEEE---TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT
T ss_pred cceEEEECCCCCEEEEEe---CCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCC
Confidence 0133333 2565 77763 234556778766443 2111 00 011111112333325665 77777667
Q ss_pred CcEEEEECCCCceEEcccccccc----cceeEEEE-CCE-EEEEeeC-CceEEEEEcC
Q 016368 310 GRLSKYDADHDWWDEVIELAELK----GAEKITAA-RGR-VCAVCEN-GERIMVVDVL 360 (390)
Q Consensus 310 ~~v~~yd~~~~~W~~i~~~p~~r----~~~~~~~~-~g~-l~i~g~~-~~~v~~~d~~ 360 (390)
+.+.+||..+.....+..++... ....++.. +|+ ||+.... .+.+.+||+.
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 88999998877776655433221 12234433 554 6666555 5678888885
No 84
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.99 E-value=0.16 Score=45.93 Aligned_cols=135 Identities=10% Similarity=0.061 Sum_probs=74.4
Q ss_pred eEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCce
Q 016368 215 SMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPA 293 (390)
Q Consensus 215 ~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~ 293 (390)
.+.+||..++. -...-.-.... ..+++. -++++++.|+ ....+.+||+.+..-...-. .......+
T Consensus 165 ~i~~wd~~~~~----~~~~~~~h~~~----v~~~~~~~~~~~l~sg~---~d~~v~~wd~~~~~~~~~~~--~h~~~v~~ 231 (340)
T 1got_B 165 TCALWDIETGQ----QTTTFTGHTGD----VMSLSLAPDTRLFVSGA---CDASAKLWDVREGMCRQTFT--GHESDINA 231 (340)
T ss_dssp CEEEEETTTTE----EEEEECCCSSC----EEEEEECTTSSEEEEEE---TTSCEEEEETTTCSEEEEEC--CCSSCEEE
T ss_pred cEEEEECCCCc----EEEEEcCCCCc----eEEEEECCCCCEEEEEe---CCCcEEEEECCCCeeEEEEc--CCcCCEEE
Confidence 68899998876 32211111111 122332 2566666642 23457789987764322111 01111122
Q ss_pred EEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 294 ASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 294 ~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++...++.+++.|+.++.+..||..+..-......+...... ++... +|++++.|+.+..+.+||+.+.
T Consensus 232 v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 232 ICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 332357889999999999999999875432211111111122 22222 6788888888889999998765
No 85
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.99 E-value=0.11 Score=46.67 Aligned_cols=173 Identities=10% Similarity=0.029 Sum_probs=94.3
Q ss_pred CCcEEEeCCCCceec-CCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFF-GPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~-~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+.+||..+++-.. +...+. ...+++.. +++.++.|+.+. .+.+||..+.. -...-..... .
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~--~~~~~~~spdg~~l~~g~~dg--------~v~i~~~~~~~----~~~~~~~~~~-~ 166 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPV--DAWTLAFSPDSQYLATGTHVG--------KVNIFGVESGK----KEYSLDTRGK-F 166 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTT--CCCCEEECTTSSEEEEECTTS--------EEEEEETTTCS----EEEEEECSSS-C
T ss_pred CcEEEEECCCCCEEEEEeCCCc--cEEEEEECCCCCEEEEEcCCC--------cEEEEEcCCCc----eeEEecCCCc-e
Confidence 468889988775322 111111 11122222 566666666543 67889988776 2211111111 1
Q ss_pred cccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEe-cCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCC
Q 016368 242 SREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADH 319 (390)
Q Consensus 242 ~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~ 319 (390)
..+++. -+++..+.|+ ....+.+||..+.+-.. +.. ......+++...++.+++.|+.++.+..||..+
T Consensus 167 ---v~~~~~spdg~~lasg~---~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~ 237 (321)
T 3ow8_A 167 ---ILSIAYSPDGKYLASGA---IDGIINIFDIATGKLLHTLEG---HAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 237 (321)
T ss_dssp ---EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECC---CSSCCCEEEECTTSCEEEEECTTSCEEEEETTT
T ss_pred ---EEEEEECCCCCEEEEEc---CCCeEEEEECCCCcEEEEEcc---cCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 122222 3666666642 23457789988764322 221 111122333335788999999999999999986
Q ss_pred CceEEccccccccccee-EEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 320 DWWDEVIELAELKGAEK-ITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 320 ~~W~~i~~~p~~r~~~~-~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.... ..+........ ++.. ++..++.|+.+..|.+||+.+.
T Consensus 238 ~~~~--~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 238 ANLA--GTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CCEE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ccee--EEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 5533 22222222222 3332 6677777777889999998765
No 86
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.98 E-value=0.059 Score=48.49 Aligned_cols=171 Identities=8% Similarity=0.039 Sum_probs=90.7
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccE-EcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWE-KKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~-~~~~~~~~~~ 241 (390)
..+.+||..+++-...-.. ....-.+++.. +++.++.|+.+. .+.+||..+.. -. .+.. .....
T Consensus 144 g~v~i~~~~~~~~~~~~~~-~~~~v~~~~~spdg~~lasg~~dg--------~i~iwd~~~~~----~~~~~~~-h~~~v 209 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDT-RGKFILSIAYSPDGKYLASGAIDG--------IINIFDIATGK----LLHTLEG-HAMPI 209 (321)
T ss_dssp SEEEEEETTTCSEEEEEEC-SSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE----EEEEECC-CSSCC
T ss_pred CcEEEEEcCCCceeEEecC-CCceEEEEEECCCCCEEEEEcCCC--------eEEEEECCCCc----EEEEEcc-cCCce
Confidence 4677888876643211000 01111122222 567777776654 68899998876 22 1211 11111
Q ss_pred cccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCC
Q 016368 242 SREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHD 320 (390)
Q Consensus 242 ~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~ 320 (390)
.+++. -++++++.|+ ....+.+||..+......-. ........++...++..++.++.++.+..||..+.
T Consensus 210 ----~~l~~spd~~~l~s~s---~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 210 ----RSLTFSPDSQLLVTAS---DDGYIKIYDVQHANLAGTLS--GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp ----CEEEECTTSCEEEEEC---TTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred ----eEEEEcCCCCEEEEEc---CCCeEEEEECCCcceeEEEc--CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 22332 3666666641 23457789988765432211 01111112232247888889999999999999865
Q ss_pred ceEEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEc
Q 016368 321 WWDEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 321 ~W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~ 359 (390)
+- +..+....... ++... ++..++.++.+..|.+||.
T Consensus 281 ~~--~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 281 TC--VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EE--EEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EE--EEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 43 33332222222 33333 5666666677778999985
No 87
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=96.97 E-value=0.00039 Score=63.48 Aligned_cols=41 Identities=24% Similarity=0.267 Sum_probs=35.8
Q ss_pred cCCCCCCcHHHHHHHHhcCC---chhhHhhhHhHHHhhcCCCCC
Q 016368 31 LLLLPGLPNHLADRCLSSLP---PALLFSVCHSWRRLLYSPYFP 71 (390)
Q Consensus 31 ~~~~~~LP~dl~~~iL~rLP---l~~~r~Vck~W~~l~~s~~f~ 71 (390)
...|..||+|++.+||.+|+ +.+++.|||+|+.+..++...
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 45578899999999999999 778889999999999887754
No 88
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.97 E-value=0.073 Score=49.90 Aligned_cols=186 Identities=7% Similarity=-0.054 Sum_probs=101.9
Q ss_pred eeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee-cCeEEEEEeecCCCCCCCCCcEEEeCCCCceec
Q 016368 100 MEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV-RNNLVLIAATTPHFLPALASPLAFNPQSNTWFF 178 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~ 178 (390)
..++.+|..+++...+...+. .. . ..... ++..+++.+... ....+++||..+++...
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~-~~-~---------------~~~~spdg~~la~~~~~~----g~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR-HN-G---------------APAFSPDGSKLAFALSKT----GSLNLYVMDLASGQIRQ 261 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS-CE-E---------------EEEECTTSSEEEEEECTT----SSCEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCcEEEeecCCC-cc-c---------------CEEEcCCCCEEEEEEecC----CCceEEEEECCCCCEEe
Confidence 468889988877665543332 11 0 22222 344444333211 12469999999988766
Q ss_pred CCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEE
Q 016368 179 GPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLC 256 (390)
Q Consensus 179 ~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~ly 256 (390)
+..... .....+.. +++.+++++... ....++++|..++. -+.+..... . ....+. -+|+..
T Consensus 262 l~~~~~--~~~~~~~spdg~~l~~~s~~~-----g~~~i~~~d~~~~~----~~~l~~~~~--~---~~~~~~spdG~~l 325 (415)
T 2hqs_A 262 VTDGRS--NNTEPTWFPDSQNLAFTSDQA-----GRPQVYKVNINGGA----PQRITWEGS--Q---NQDADVSSDGKFM 325 (415)
T ss_dssp CCCCSS--CEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTSSC----CEECCCSSS--E---EEEEEECTTSSEE
T ss_pred CcCCCC--cccceEECCCCCEEEEEECCC-----CCcEEEEEECCCCC----EEEEecCCC--c---ccCeEECCCCCEE
Confidence 654321 11122222 555444443321 23478999998877 555433211 1 122222 366655
Q ss_pred EEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCC---cEEEEECCCCceEEcc
Q 016368 257 MVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKG---RLSKYDADHDWWDEVI 326 (390)
Q Consensus 257 v~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~---~v~~yd~~~~~W~~i~ 326 (390)
+++....+...+.++|+.+++...+.. . . .....+...+|+.+++++.++ .++.+|..+.....+.
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~~~~~l~~-~--~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATGGVQVLSS-T--F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EEEEECSSCEEEEEEETTTCCEEECCC-S--S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred EEEECcCCceEEEEEECCCCCEEEecC-C--C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 554332234567899999988876655 2 1 222333335788777766444 7999999877666654
No 89
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.96 E-value=0.084 Score=45.76 Aligned_cols=220 Identities=9% Similarity=-0.024 Sum_probs=109.4
Q ss_pred CceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee-cCeEEEEEeecCCCCCCCCCcEEEeCCC-Cc
Q 016368 98 SSMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV-RNNLVLIAATTPHFLPALASPLAFNPQS-NT 175 (390)
Q Consensus 98 ~~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~~~~dp~t-~~ 175 (390)
....++.+|+.+++...+..... ... ..... ++..+++++ -..+++||..+ ++
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--~v~---------------~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~ 74 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--LFE---------------APNWSPDGKYLLLNS--------EGLLYRLSLAGDPS 74 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--CCE---------------EEEECTTSSEEEEEE--------TTEEEEEESSSCCS
T ss_pred cceeEEEEeCCCCceeeeccCCc--ceE---------------eeEECCCCCEEEEEc--------CCeEEEEeCCCCCC
Confidence 34568889998877655433222 100 22222 345555542 14799999998 77
Q ss_pred eecCCCCCCCCcceEEEE-ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECC
Q 016368 176 WFFGPQLSIPRRWCAMGS-VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKG 253 (390)
Q Consensus 176 W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g 253 (390)
...+........-..++. -+++.+++++... .....++.+|..+.. -+.+..... ....+. -++
T Consensus 75 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~----~~~~~l~~~~~~~~~----~~~~~~~~~------~~~~~~spdg 140 (297)
T 2ojh_A 75 PEKVDTGFATICNNDHGISPDGALYAISDKVE----FGKSAIYLLPSTGGT----PRLMTKNLP------SYWHGWSPDG 140 (297)
T ss_dssp CEECCCTTCCCBCSCCEECTTSSEEEEEECTT----TSSCEEEEEETTCCC----CEECCSSSS------EEEEEECTTS
T ss_pred ceEeccccccccccceEECCCCCEEEEEEeCC----CCcceEEEEECCCCc----eEEeecCCC------ccceEECCCC
Confidence 666543332111122222 2566555555332 134578888888777 555543321 122232 255
Q ss_pred E-EEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeC-CCC--cEEEEECCCCceEEccccc
Q 016368 254 N-LCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNE-GKG--RLSKYDADHDWWDEVIELA 329 (390)
Q Consensus 254 ~-lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg-~~~--~v~~yd~~~~~W~~i~~~p 329 (390)
+ +++.+.. .+...++.+|..+.....+.. ... ....+....+|+.+++.+ .++ .+|.++..+.....+....
T Consensus 141 ~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~-~~~--~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 216 (297)
T 2ojh_A 141 KSFTYCGIR-DQVFDIYSMDIDSGVETRLTH-GEG--RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSA 216 (297)
T ss_dssp SEEEEEEEE-TTEEEEEEEETTTCCEEECCC-SSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCS
T ss_pred CEEEEEECC-CCceEEEEEECCCCcceEccc-CCC--ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCC
Confidence 5 4433211 112234456677776665544 211 112233224666444443 344 7788887776666654322
Q ss_pred ccccceeEEEE-CCE-EEEEeeCC----------ceEEEEEcCCC
Q 016368 330 ELKGAEKITAA-RGR-VCAVCENG----------ERIMVVDVLAS 362 (390)
Q Consensus 330 ~~r~~~~~~~~-~g~-l~i~g~~~----------~~v~~~d~~~~ 362 (390)
.....+... +|+ |++.+..+ ..++++|+.+.
T Consensus 217 --~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 217 --YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred --cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 111222222 455 44443321 46899998765
No 90
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.95 E-value=0.094 Score=48.76 Aligned_cols=174 Identities=13% Similarity=0.039 Sum_probs=101.1
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
+.+.++++.......+... ...-.+++.. ++.||+.-- ....+.++++.... .+.+........
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~--------~~~~I~r~~~~g~~----~~~~~~~~~~~p 161 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDV--------TLDRILRANLNGSN----VEEVVSTGLESP 161 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEET--------TTTEEEEEETTSCC----EEEEECSSCSCC
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeC--------CCCcEEEEecCCCC----cEEEEeCCCCCc
Confidence 4678888877665543221 1122334443 578998732 33578999998776 555433221111
Q ss_pred cccceEEEE--ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCc-eEEE-eeCCeEEEEeCCC-CcEEEEE
Q 016368 242 SREAVEAVG--FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGP-AAST-MNEEELYVVNEGK-GRLSKYD 316 (390)
Q Consensus 242 ~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~-~~~g~lyv~gg~~-~~v~~yd 316 (390)
.+.++ .+++||+.- .+...+.++++....-+.+.. .....+ .+++ ..+|.||+..... +.|++++
T Consensus 162 ----~glavd~~~g~lY~~d---~~~~~I~~~~~dg~~~~~l~~---~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 162 ----GGLAVDWVHDKLYWTD---SGTSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp ----CCEEEETTTTEEEEEE---TTTTEEEECBTTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ----cEEEEEeCCCeEEEEc---CCCCeEEEEeCCCCceEEeec---CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 23343 478999982 234567788887554333222 111122 3343 1378999988665 7999999
Q ss_pred CCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 317 ADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 317 ~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+....-+.+.. .......++++- +++||+.-.....|+.+|+...
T Consensus 232 ~dG~~~~~~~~-~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 232 MDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp TTSCSCEEEEC-SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred CCCCCcEEEEE-CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 98654443322 112233456653 7889998555668888887654
No 91
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.93 E-value=0.00018 Score=63.52 Aligned_cols=36 Identities=31% Similarity=0.332 Sum_probs=33.6
Q ss_pred CCCCcHHHHHHHHhcCC---chhhHhhhHhHHHhhcCCC
Q 016368 34 LPGLPNHLADRCLSSLP---PALLFSVCHSWRRLLYSPY 69 (390)
Q Consensus 34 ~~~LP~dl~~~iL~rLP---l~~~r~Vck~W~~l~~s~~ 69 (390)
+..||+|++..||++|+ ++++.+|||+||.++.++.
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~ 43 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPI 43 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccch
Confidence 45799999999999998 9999999999999999986
No 92
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.90 E-value=0.031 Score=49.36 Aligned_cols=180 Identities=9% Similarity=0.041 Sum_probs=98.3
Q ss_pred CCcEEEeCCCCc--eecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNT--WFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~--W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
+.+.++|+.+++ |+.-..-. ...+.....-+|+|++.+ .+.+..||+ +++. .|+.-......
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~----------~~~V~~~d~-~G~~--~W~~~~~~~~~-- 78 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY----------SKGAKMITR-DGRE--LWNIAAPAGCE-- 78 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC----------BSEEEEECT-TSCE--EEEEECCTTCE--
T ss_pred CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC----------CCCEEEECC-CCCE--EEEEcCCCCcc--
Confidence 578888987774 55422110 122222333378888832 136889999 5542 37644321111
Q ss_pred cccceE-EEEECCEEEEEcccCCCCceeEEEeCCCC-CeEec-CCCCCC--CCCCceEEEeeCCeEEEEeCCCCcEEEEE
Q 016368 242 SREAVE-AVGFKGNLCMVNLKGNGAKDGAIYNVELD-KWKEM-PEGMHA--GWNGPAASTMNEEELYVVNEGKGRLSKYD 316 (390)
Q Consensus 242 ~r~~~~-~~~~~g~lyv~gg~g~~~~~~~~yd~~~~-~W~~~-~~~~~~--~~~~~~~~~~~~g~lyv~gg~~~~v~~yd 316 (390)
.++ ....+|++++.... ....+..+|++.+ .|+.. ...... ........ ..+|.+++....++.+..||
T Consensus 79 ---~~~~~~~~dG~~lv~~~~--~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~-~~~G~~lv~~~~~~~v~~~d 152 (276)
T 3no2_A 79 ---MQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINK-NKKGNYLVPLFATSEVREIA 152 (276)
T ss_dssp ---EEEEEECTTSCEEEEEES--TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEE-CTTSCEEEEETTTTEEEEEC
T ss_pred ---ccccEECCCCCEEEEecC--CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceE-CCCCCEEEEecCCCEEEEEC
Confidence 122 23347777776311 1345667787544 34432 111111 11111222 26888888887788999999
Q ss_pred CCCC-ceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCCCCcceEec
Q 016368 317 ADHD-WWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLASPARAWLVD 370 (390)
Q Consensus 317 ~~~~-~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~~~~~W~~~ 370 (390)
++.+ .|+.-.. ...++.... +|.++|.+..+..++.+|+.+.. ..|+..
T Consensus 153 ~~G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~-~~w~~~ 203 (276)
T 3no2_A 153 PNGQLLNSVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR-IVRRVN 203 (276)
T ss_dssp TTSCEEEEEECS----SCCCEEEECTTSCEEEECBTTSEEEEECTTTCC-EEEEEE
T ss_pred CCCCEEEEEECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc-EEEEec
Confidence 9833 2654332 122334444 78888887777789999988542 258864
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.88 E-value=0.16 Score=45.70 Aligned_cols=64 Identities=13% Similarity=0.137 Sum_probs=41.3
Q ss_pred eC--CeEEEEeCCCCcEEEEECCCCceE--Eccccccc--ccce-eEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 298 NE--EELYVVNEGKGRLSKYDADHDWWD--EVIELAEL--KGAE-KITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 298 ~~--g~lyv~gg~~~~v~~yd~~~~~W~--~i~~~p~~--r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
.+ +.+++.|+.++.+..||..+..-. .+..+... .... .+... ++++++.++.+..|.+||+.+
T Consensus 295 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 295 MDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 56 889999999999999999876421 22223222 1222 23333 677777777788999999753
No 94
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.88 E-value=0.12 Score=52.64 Aligned_cols=188 Identities=5% Similarity=-0.018 Sum_probs=98.0
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
++..+++++. -..+.+||..+++....-... ...-.+++.. ++..++.|+.+. .+.+||..++
T Consensus 66 ~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~ 129 (814)
T 3mkq_A 66 RKNWIIVGSD-------DFRIRVFNYNTGEKVVDFEAH-PDYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWENN 129 (814)
T ss_dssp GGTEEEEEET-------TSEEEEEETTTCCEEEEEECC-SSCEEEEEECSSSSEEEEEETTS--------EEEEEEGGGT
T ss_pred CCCEEEEEeC-------CCeEEEEECCCCcEEEEEecC-CCCEEEEEEeCCCCEEEEEcCCC--------EEEEEECCCC
Confidence 3455565543 246889998887653321111 1111122222 455555665543 7889998876
Q ss_pred ccccccEEcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEee--CC
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMN--EE 300 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~g 300 (390)
. .....+...... ..+++.. ++..++.|+ ....+.+||..+.+-..... .........++... ++
T Consensus 130 ~-----~~~~~~~~~~~~--v~~~~~~p~~~~~l~~~~---~dg~v~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 130 W-----ALEQTFEGHEHF--VMCVAFNPKDPSTFASGC---LDRTVKVWSLGQSTPNFTLT-TGQERGVNYVDYYPLPDK 198 (814)
T ss_dssp S-----EEEEEEECCSSC--EEEEEEETTEEEEEEEEE---TTSEEEEEETTCSSCSEEEE-CCCTTCCCEEEECCSTTC
T ss_pred c-----eEEEEEcCCCCc--EEEEEEEcCCCCEEEEEe---CCCeEEEEECCCCcceeEEe-cCCCCCEEEEEEEECCCC
Confidence 2 222222111110 1333333 455565531 23457789986553221111 11111222333213 78
Q ss_pred eEEEEeCCCCcEEEEECCCCceEEccccccccccee-EEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 301 ELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEK-ITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 301 ~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~-~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+++.|+.++.+..||..+..- +..+........ +... ++.+++.|+.++.+.+||+.+.
T Consensus 199 ~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 199 PYMITASDDLTIKIWDYQTKSC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp CEEEEECTTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred CEEEEEeCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 8899999999999999886542 332322222233 3332 5667777777778999998764
No 95
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.88 E-value=0.066 Score=48.07 Aligned_cols=183 Identities=11% Similarity=0.093 Sum_probs=97.5
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEE-cccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEK-KAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~-~~~~~~~~~ 241 (390)
..+++||+.+++.+.+.... ...-.+++.. ++++|+...... .....+.+||+.++. -+. +........
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~----~~~~~i~~~d~~~~~----~~~~~~~~~~~~~ 136 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF----KSTGGIFAATENGDN----LQDIIEDLSTAYC 136 (333)
T ss_dssp CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS----SSCCEEEEECTTSCS----CEEEECSSSSCCC
T ss_pred CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC----CCCceEEEEeCCCCE----EEEEEccCccCCc
Confidence 57999999988876543111 1112233332 678888754331 123478999999887 542 222111111
Q ss_pred cccceEEEE-ECCEEEEEcccC---CCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC-eEEEEeCCCCcEEEEE
Q 016368 242 SREAVEAVG-FKGNLCMVNLKG---NGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE-ELYVVNEGKGRLSKYD 316 (390)
Q Consensus 242 ~r~~~~~~~-~~g~lyv~gg~g---~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd 316 (390)
...+++ -+|++|+....+ .....+..+|+.+++...+..... ....++...+| .||+.....+.+++||
T Consensus 137 ---~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~i~~~~dg~~l~v~~~~~~~i~~~d 210 (333)
T 2dg1_A 137 ---IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNIS---VANGIALSTDEKVLWVTETTANRLHRIA 210 (333)
T ss_dssp ---EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEES---SEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ---ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCC---cccceEECCCCCEEEEEeCCCCeEEEEE
Confidence 133333 367888864211 012346678887766655432111 11233322455 4888776667899999
Q ss_pred CCCC--ceEEcc-----cccccccceeEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 317 ADHD--WWDEVI-----ELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 317 ~~~~--~W~~i~-----~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
..++ ....+. ..+......+++.- +|.||+....++.|.+||+..
T Consensus 211 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g 263 (333)
T 2dg1_A 211 LEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRG 263 (333)
T ss_dssp ECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTTS
T ss_pred ecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCCC
Confidence 8642 333221 11111122334443 678888765566888888743
No 96
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.87 E-value=0.29 Score=45.60 Aligned_cols=176 Identities=11% Similarity=-0.002 Sum_probs=100.5
Q ss_pred CCcEEEeCCCCc----eecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC
Q 016368 164 ASPLAFNPQSNT----WFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK 237 (390)
Q Consensus 164 ~~~~~~dp~t~~----W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~ 237 (390)
..++++++.... ...+.... ...-.++++. ++.||+.-.. ...++++|+.... -+.+....
T Consensus 134 ~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavD~~~~~lY~~d~~--------~~~I~~~~~~g~~----~~~l~~~~ 200 (400)
T 3p5b_L 134 RMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHSNIYWTDSV--------LGTVSVADTKGVK----RKTLFREN 200 (400)
T ss_dssp TEEEEEEC------CCCEEEECSS-CSCEEEEEEETTTTEEEEEETT--------TTEEEEECTTTCS----EEEEEECS
T ss_pred CeEEEEEcccCCCCCcceEEEeCC-CCCcccEEEEecCCceEEEECC--------CCeEEEEeCCCCc----eEEEEeCC
Confidence 568888876521 12111100 1112234443 7899998432 3478899988765 44443211
Q ss_pred CCCccccceEEEE--ECCEEEEEcccCCC-CceeEEEeCCCCCeEecCCCCCCCCCCc-eEEEe-eCCeEEEEeCCCCcE
Q 016368 238 DGRFSREAVEAVG--FKGNLCMVNLKGNG-AKDGAIYNVELDKWKEMPEGMHAGWNGP-AASTM-NEEELYVVNEGKGRL 312 (390)
Q Consensus 238 ~~~~~r~~~~~~~--~~g~lyv~gg~g~~-~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~-~~g~lyv~gg~~~~v 312 (390)
... ..++++ .+|.||+.- .+ ...++++++....=+.+.. .....+ ++++. .+++||+.....+.|
T Consensus 201 ~~~----P~~iavdp~~g~ly~td---~~~~~~I~~~~~dG~~~~~~~~---~~l~~P~glavd~~~~~lY~aD~~~~~I 270 (400)
T 3p5b_L 201 GSK----PRAIVVDPVHGFMYWTD---WGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGITLDLLSGRLYWVDSKLHSI 270 (400)
T ss_dssp SCC----EEEEEEETTTTEEEEEE---CSSSCCEEEEETTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCC----cceEEEecccCeEEEEe---CCCCCEEEEEeCCCCccEEEEE---CCCCceEEEEEEeCCCEEEEEECCCCEE
Confidence 111 134454 378999983 12 2467888886543222211 111122 34431 368999999888899
Q ss_pred EEEECCCCceEEcccc-cccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 313 SKYDADHDWWDEVIEL-AELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 313 ~~yd~~~~~W~~i~~~-p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+++|.....-..+... ......+++++.++.||+.-..++.|+.+|..+.
T Consensus 271 ~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 271 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp EEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSC
T ss_pred EEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCC
Confidence 9999986544444322 1234556888899999998666778999996554
No 97
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.80 E-value=0.042 Score=56.01 Aligned_cols=182 Identities=11% Similarity=-0.010 Sum_probs=101.9
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--C--CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--G--GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~ 239 (390)
..+.+||...+++..+..+........+..+ + +.+++.|+.++ .+.+||..++. |..+..+...
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg--------~I~vwd~~~~~----~~~~~~~~~h 98 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKEENGR----WSQIAVHAVH 98 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS--------CEEEEEEETTE----EEEEEEECCC
T ss_pred CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC--------eEEEEECCCCc----ccccccccCC
Confidence 4688888877666655444332222223333 3 66777777664 68899999987 7766554322
Q ss_pred CccccceEEEEE-C--CEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEee-------------CCeEE
Q 016368 240 RFSREAVEAVGF-K--GNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMN-------------EEELY 303 (390)
Q Consensus 240 ~~~r~~~~~~~~-~--g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-------------~g~ly 303 (390)
... ..+++.. + +.+++.|+ ....+.+||..+..-..............++.... ++.++
T Consensus 99 ~~~--V~~v~~sp~~~~~~l~sgs---~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l 173 (753)
T 3jro_A 99 SAS--VNSVQWAPHEYGPLLLVAS---SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (753)
T ss_dssp SSC--EEEEEECCGGGCSEEEEEE---TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCE
T ss_pred CCC--eEEEEECCCCCCCEEEEEe---CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEE
Confidence 211 1233332 2 55666642 23457788887652111110000111111222111 47888
Q ss_pred EEeCCCCcEEEEECCCC--ceEEcccccccccceeEEEE--C---CEEEEEeeCCceEEEEEcCCC
Q 016368 304 VVNEGKGRLSKYDADHD--WWDEVIELAELKGAEKITAA--R---GRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 304 v~gg~~~~v~~yd~~~~--~W~~i~~~p~~r~~~~~~~~--~---g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+.|+.++.+..||..+. .+..+..+...........+ + +.+++.|+.++.|.+||+.+.
T Consensus 174 ~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 88888999999987654 34544444433333333333 4 678888787889999998774
No 98
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.80 E-value=0.056 Score=54.55 Aligned_cols=176 Identities=11% Similarity=0.028 Sum_probs=98.0
Q ss_pred CCCcEEEeCCCC----ceec-CC-CCCCCCcceEEEE--ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcc
Q 016368 163 LASPLAFNPQSN----TWFF-GP-QLSIPRRWCAMGS--VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKA 234 (390)
Q Consensus 163 ~~~~~~~dp~t~----~W~~-~~-~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~ 234 (390)
...|+++++.+. .-.. +. .+..| .++++ .++.||+.-. ....+.++++.... -+.+.
T Consensus 427 ~~~I~~~~~~g~~~~~~~~~~i~~~~~~P---~glavD~~~g~LY~tD~--------~~~~I~v~d~dg~~----~~~l~ 491 (699)
T 1n7d_A 427 QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDS--------VLGTVSVADTKGVK----RKTLF 491 (699)
T ss_dssp TTSBEEEESCCCCC-CCCCCBCCSCC--C---CCEECCCSSSBCEECCT--------TTSCEEEEBSSSCC----EEEEC
T ss_pred CCeEEEEecCCCCCCcceEEEEeCCCCCc---ceEEEEeeCCcEEEEec--------cCCeEEEEecCCCc----eEEEE
Confidence 357888888751 1111 11 11112 22333 3678998632 33578899987765 33332
Q ss_pred cCCCCCccccceEEEE--ECCEEEEEcccCCCC-ceeEEEeCCCCCeEecCCCCCCCCCCceEEEe-eCCeEEEEeCCCC
Q 016368 235 QLKDGRFSREAVEAVG--FKGNLCMVNLKGNGA-KDGAIYNVELDKWKEMPEGMHAGWNGPAASTM-NEEELYVVNEGKG 310 (390)
Q Consensus 235 ~~~~~~~~r~~~~~~~--~~g~lyv~gg~g~~~-~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~g~lyv~gg~~~ 310 (390)
...... ..++++ .++.||+.. .+. ..++++++....-+.+.. .... .-.++++. .+++||+.....+
T Consensus 492 ~~~~~~----P~giavDp~~g~ly~td---~~~~~~I~~~~~dG~~~~~l~~-~~l~-~PnGlavd~~~~~LY~aD~~~~ 562 (699)
T 1n7d_A 492 REQGSK----PRAIVVDPVHGFMYWTD---WGTPAKIKKGGLNGVDIYSLVT-ENIQ-WPNGITLDLLSGRLYWVDSKLH 562 (699)
T ss_dssp CCSSCC----CCCEECCSSSSCCEECC---CSSSCCEEBCCSSSCCCCEESC-SSCS-SCCCEEECTTTCCEEEEETTTT
T ss_pred eCCCCC----cceEEEccCCCcEEEcc---cCCCCeEEEEeCCCCCeeEEEe-CCCC-CccEEEEeccCCEEEEEecCCC
Confidence 211111 123343 368899872 222 456677765443332221 1111 11234431 3589999998888
Q ss_pred cEEEEECCCCceEEcccc-cccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 311 RLSKYDADHDWWDEVIEL-AELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 311 ~v~~yd~~~~~W~~i~~~-p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.|+++|+....-+.+... ......+++++.++.||+.-..++.|.++|..+.
T Consensus 563 ~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 563 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp EEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred eEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 999999976544444332 2233456788888999998666778999997643
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.76 E-value=0.14 Score=45.85 Aligned_cols=187 Identities=10% Similarity=0.027 Sum_probs=96.9
Q ss_pred cCe-EEEEEeecCCCCCCCCCcEEEeC-CCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCC
Q 016368 146 RNN-LVLIAATTPHFLPALASPLAFNP-QSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKS 223 (390)
Q Consensus 146 ~~~-l~~~gG~~~~~~~~~~~~~~~dp-~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 223 (390)
++. .++.|+. -..+.+||. .+++...+........-.+++...+.+++.|+.+. .+.+||..+
T Consensus 67 ~~~~~l~~~~~-------dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~--------~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTV-------QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDG--------LIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEET-------TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTS--------EEEEECHHH
T ss_pred CCCcEEEEEcC-------CCeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCC--------eEEEEcccc
Confidence 455 5665543 247899999 88876655441111111233333355566666553 678888776
Q ss_pred ---------CccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCC-CC--eEecCCCCCCCCCC
Q 016368 224 ---------DREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVEL-DK--WKEMPEGMHAGWNG 291 (390)
Q Consensus 224 ---------~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~-~~--W~~~~~~~~~~~~~ 291 (390)
.. .+..+..... ..+++...+.+++.+ ....+.+||..+ .. ...... ......
T Consensus 132 ~~~~~~~~~~~------~~~~~~~~~~---v~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i 196 (342)
T 1yfq_A 132 YGDGVIAVKNL------NSNNTKVKNK---IFTMDTNSSRLIVGM----NNSQVQWFRLPLCEDDNGTIEES--GLKYQI 196 (342)
T ss_dssp HTTBCEEEEES------CSSSSSSCCC---EEEEEECSSEEEEEE----STTEEEEEESSCCTTCCCEEEEC--SCSSCE
T ss_pred cccccccccCC------eeeEEeeCCc---eEEEEecCCcEEEEe----CCCeEEEEECCccccccceeeec--CCCCce
Confidence 33 1112221111 234444455544332 334677899887 33 222221 111111
Q ss_pred ceEEEee-CCeEEEEeCCCCcEEEEECCCC--c--eEEcccccccc---------ccee-EEEE-CCEEEEEeeCCceEE
Q 016368 292 PAASTMN-EEELYVVNEGKGRLSKYDADHD--W--WDEVIELAELK---------GAEK-ITAA-RGRVCAVCENGERIM 355 (390)
Q Consensus 292 ~~~~~~~-~g~lyv~gg~~~~v~~yd~~~~--~--W~~i~~~p~~r---------~~~~-~~~~-~g~l~i~g~~~~~v~ 355 (390)
..++... ++.+++.++.++.+..||.... . ...+..+.... .... +... ++++++.|+.+..|.
T Consensus 197 ~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 276 (342)
T 1yfq_A 197 RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS 276 (342)
T ss_dssp EEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEE
T ss_pred eEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEE
Confidence 2333323 6888899988888888776644 1 11111111111 1222 3332 567677777777999
Q ss_pred EEEcCCC
Q 016368 356 VVDVLAS 362 (390)
Q Consensus 356 ~~d~~~~ 362 (390)
+||+.+.
T Consensus 277 vwd~~~~ 283 (342)
T 1yfq_A 277 CWNLQTR 283 (342)
T ss_dssp EEETTTT
T ss_pred EEcCccH
Confidence 9999865
No 100
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.76 E-value=0.027 Score=51.57 Aligned_cols=182 Identities=11% Similarity=0.034 Sum_probs=91.6
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+.+||..++.|+.+..+...........+ ++++++.|+.+. .+.+||..++.. |.....+.....
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~--------~v~vwd~~~~~~---~~~~~~~~~~~~ 101 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR--------NAYVYEKRPDGT---WKQTLVLLRLNR 101 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS--------SEEEC------C---CCCEEECCCCSS
T ss_pred CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC--------eEEEEEcCCCCc---eeeeeEecccCC
Confidence 4688899999888777666543333333333 566777776654 678888876541 333322221111
Q ss_pred cccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCC-eEecCCCCCC--CCCCceEEEeeCCeEEEEeCCCCcEEEEEC
Q 016368 242 SREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDK-WKEMPEGMHA--GWNGPAASTMNEEELYVVNEGKGRLSKYDA 317 (390)
Q Consensus 242 ~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~-W~~~~~~~~~--~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~ 317 (390)
. ..+++.. +++.++.|+ ....+.+||..+.+ |..... +.. ......++...++++++.++.++.+..||.
T Consensus 102 ~--v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 102 A--ATFVRWSPNEDKFAVGS---GARVISVCYFEQENDWWVSKH-LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp C--EEEEECCTTSSCCEEEE---SSSCEEECCC-----CCCCEE-ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred c--eEEEEECCCCCEEEEEe---cCCeEEEEEECCcccceeeeE-eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 0 1222222 455555532 23446788887664 433332 211 111222332247888889988999999998
Q ss_pred CCCce----------------EEccccccccccee-EEEE-CCEEEEEeeCCceEEEEEcCCCC
Q 016368 318 DHDWW----------------DEVIELAELKGAEK-ITAA-RGRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 318 ~~~~W----------------~~i~~~p~~r~~~~-~~~~-~g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
.+... ..+..+ ....... +... ++++++.|+.+..|.+||+.+..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 64331 122222 1122222 3322 67777777777899999988763
No 101
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.75 E-value=0.023 Score=52.07 Aligned_cols=186 Identities=6% Similarity=0.011 Sum_probs=94.3
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcc-eEEEEE-C-CEEEEEeccCCCCCCCccCeEEEEECC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRW-CAMGSV-G-GVVYVASGVGAHYRGDVARSMKKWDLK 222 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~-~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~yd~~ 222 (390)
++..++.|+. -..+.+||..+++-... +...... .+++.. + ..+++.++.+. .+.+||..
T Consensus 150 dg~~l~sgs~-------dg~v~iwd~~~~~~~~~--~~~h~~~v~~v~~s~~~~~~~~s~~~dg--------~v~~wd~~ 212 (357)
T 4g56_B 150 DGTQAVSGGK-------DFSVKVWDLSQKAVLKS--YNAHSSEVNCVAACPGKDTIFLSCGEDG--------RILLWDTR 212 (357)
T ss_dssp SSSEEEEEET-------TSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTCSSCEEEEETTS--------CEEECCTT
T ss_pred CCCEEEEEeC-------CCeEEEEECCCCcEEEE--EcCCCCCEEEEEEccCCCceeeeeccCC--------ceEEEECC
Confidence 3455555543 23688899988754321 1111111 122222 3 34667776654 67889988
Q ss_pred CCccccccEEcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeE-ecCCCCCCCCCCceEEEeeC
Q 016368 223 SDREDWKWEKKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWK-EMPEGMHAGWNGPAASTMNE 299 (390)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~ 299 (390)
+.. -........... ...+++.. ++.+++.|+ ....+.+||+.+.+-. .+.. .......++...+
T Consensus 213 ~~~----~~~~~~~~~~~~--~v~~v~~sp~~~~~la~g~---~d~~i~~wd~~~~~~~~~~~~---~~~~v~~l~~sp~ 280 (357)
T 4g56_B 213 KPK----PATRIDFCASDT--IPTSVTWHPEKDDTFACGD---ETGNVSLVNIKNPDSAQTSAV---HSQNITGLAYSYH 280 (357)
T ss_dssp SSS----CBCBCCCTTCCS--CEEEEEECTTSTTEEEEEE---SSSCEEEEESSCGGGCEEECC---CSSCEEEEEECSS
T ss_pred CCc----eeeeeeeccccc--cccchhhhhcccceEEEee---cccceeEEECCCCcEeEEEec---cceeEEEEEEcCC
Confidence 766 322222111111 01223322 356666642 2234678998765311 1111 1111122332234
Q ss_pred C-eEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 300 E-ELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 300 g-~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+ ++++.|+.++.+.+||..+.+-... +.......+++.. ++.+++.++.+..|.+||+.++
T Consensus 281 ~~~~lasgs~D~~i~iwd~~~~~~~~~--~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 281 SSPFLASISEDCTVAVLDADFSEVFRD--LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSCCEEEEETTSCEEEECTTSCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEeCCCEEEEEECCCCcEeEE--CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 4 5667788889999999987653322 2211122233332 5777777777889999998765
No 102
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.75 E-value=0.03 Score=50.42 Aligned_cols=148 Identities=9% Similarity=0.073 Sum_probs=84.4
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccC-CCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKG-NGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g-~~~~~~~~yd 272 (390)
+++||+.+... ..+.+||+.++. .+.+....... ..+++. -+|++|+....+ .....+.+||
T Consensus 55 ~g~l~~~~~~~--------~~i~~~d~~~~~----~~~~~~~~~~~----~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 55 QGQLFLLDVFE--------GNIFKINPETKE----IKRPFVSHKAN----PAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp TSCEEEEETTT--------CEEEEECTTTCC----EEEEEECSSSS----EEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred CCCEEEEECCC--------CEEEEEeCCCCc----EEEEeeCCCCC----cceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 57788876543 378999999888 66543211111 133443 377888874111 0113577899
Q ss_pred CCCCCeEe-cCCCCCCCCCCceEEEeeCCeEEEEeCC------CCcEEEEECCCCceEEcccccccccceeEEEE-CC-E
Q 016368 273 VELDKWKE-MPEGMHAGWNGPAASTMNEEELYVVNEG------KGRLSKYDADHDWWDEVIELAELKGAEKITAA-RG-R 343 (390)
Q Consensus 273 ~~~~~W~~-~~~~~~~~~~~~~~~~~~~g~lyv~gg~------~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g-~ 343 (390)
++++.... +.. .........+++..+|++|+.... .+.+++||+++.+...+.. ......+++.. +| .
T Consensus 119 ~~~~~~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 119 ENGDNLQDIIED-LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NISVANGIALSTDEKV 195 (333)
T ss_dssp TTSCSCEEEECS-SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EESSEEEEEECTTSSE
T ss_pred CCCCEEEEEEcc-CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCCcccceEECCCCCE
Confidence 98887653 222 111111223333347889887643 3489999998776665432 11122344443 44 4
Q ss_pred EEEEeeCCceEEEEEcCC
Q 016368 344 VCAVCENGERIMVVDVLA 361 (390)
Q Consensus 344 l~i~g~~~~~v~~~d~~~ 361 (390)
||+.....+.+++||+.+
T Consensus 196 l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 196 LWVTETTANRLHRIALED 213 (333)
T ss_dssp EEEEEGGGTEEEEEEECT
T ss_pred EEEEeCCCCeEEEEEecC
Confidence 777755566888898854
No 103
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.75 E-value=0.36 Score=44.91 Aligned_cols=188 Identities=11% Similarity=0.110 Sum_probs=100.1
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKS 223 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 223 (390)
.++++.+|-. +.|++||..+++...+-.+......-.++.+ +++.++.|+.+. .+.+||..+
T Consensus 115 ~~n~lAvgld--------~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg--------~v~iWd~~~ 178 (420)
T 4gga_A 115 SGNVLAVALD--------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQ 178 (420)
T ss_dssp TTSEEEEEET--------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTT
T ss_pred CCCEEEEEeC--------CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC--------eEEEEEcCC
Confidence 4566655531 4799999999977655443332222223333 567777777664 788999988
Q ss_pred CccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEE
Q 016368 224 DREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELY 303 (390)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~ly 303 (390)
+. -......... ...+...++.+.+.|+ .......+|........... .........+....++..+
T Consensus 179 ~~----~~~~~~~h~~-----~v~~~s~~~~~l~sgs---~d~~i~~~d~~~~~~~~~~~-~~h~~~~~~~~~~~~g~~l 245 (420)
T 4gga_A 179 QK----RLRNMTSHSA-----RVGSLSWNSYILSSGS---RSGHIHHHDVRVAEHHVATL-SGHSQEVCGLRWAPDGRHL 245 (420)
T ss_dssp TE----EEEEECCCSS-----CEEEEEEETTEEEEEE---TTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEE
T ss_pred Cc----EEEEEeCCCC-----ceEEEeeCCCEEEEEe---CCCceeEeeecccceeeEEe-cccccceeeeeecCCCCee
Confidence 76 2221111111 2334456677666642 23445677776543322111 0011111122223578888
Q ss_pred EEeCCCCcEEEEECCCCc--eEEccccccccccee-EEE--ECCEEEEEee--CCceEEEEEcCCC
Q 016368 304 VVNEGKGRLSKYDADHDW--WDEVIELAELKGAEK-ITA--ARGRVCAVCE--NGERIMVVDVLAS 362 (390)
Q Consensus 304 v~gg~~~~v~~yd~~~~~--W~~i~~~p~~r~~~~-~~~--~~g~l~i~g~--~~~~v~~~d~~~~ 362 (390)
+.++.++.+..||..+.. +..+........... ++. .+..+++.++ .+..|.+||+.+.
T Consensus 246 ~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 246 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp EEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred eeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 888889999999887643 222222222222222 222 2445555543 3567889998775
No 104
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.74 E-value=0.05 Score=49.45 Aligned_cols=190 Identities=14% Similarity=0.153 Sum_probs=103.7
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCC--CCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSI--PRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLK 222 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~--~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~ 222 (390)
++.+++.++.. ..+.+||..+++|.....+.. ...-.+++.. +++.++.|+.+. .+.+||..
T Consensus 27 ~g~~las~~~D-------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------~v~iw~~~ 91 (345)
T 3fm0_A 27 AGTLLASCGGD-------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------TTCIWKKN 91 (345)
T ss_dssp TSSCEEEEETT-------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEEC
T ss_pred CCCEEEEEcCC-------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--------cEEEEEcc
Confidence 34555555432 357888888877643221111 1111122222 566777777654 57788887
Q ss_pred CCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCC-CeEecCCCCC-CCCCCceEEEeeC
Q 016368 223 SDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELD-KWKEMPEGMH-AGWNGPAASTMNE 299 (390)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~-~W~~~~~~~~-~~~~~~~~~~~~~ 299 (390)
++. ++.+..+...... -.+++.. ++++.+.|+ ....+.+||..+. .+..+.. .. .......++...+
T Consensus 92 ~~~----~~~~~~~~~h~~~--v~~v~~sp~~~~l~s~s---~D~~v~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 92 QDD----FECVTTLEGHENE--VKSVAWAPSGNLLATCS---RDKSVWVWEVDEEDEYECVSV-LNSHTQDVKHVVWHPS 161 (345)
T ss_dssp CC-----EEEEEEECCCSSC--EEEEEECTTSSEEEEEE---TTSCEEEEEECTTSCEEEEEE-ECCCCSCEEEEEECSS
T ss_pred CCC----eEEEEEccCCCCC--ceEEEEeCCCCEEEEEE---CCCeEEEEECCCCCCeEEEEE-ecCcCCCeEEEEECCC
Confidence 776 6554443221110 1223322 566665542 2345678887654 3332222 11 1111112222357
Q ss_pred CeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcC
Q 016368 300 EELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 300 g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~ 360 (390)
+.+++.|+.++.+..||..+..|..+..+.........+.+ +|+.++.|+.+..|.+||..
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 88888898999999999988888766655444333333333 67777777777788888863
No 105
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.71 E-value=0.39 Score=44.69 Aligned_cols=184 Identities=10% Similarity=0.067 Sum_probs=92.4
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
+.+++.|+.. ..+.+||..+.+-.. .+......-.++.+ ++..++.|+.+. .+.+||..++
T Consensus 162 ~~~l~sgs~D-------~~i~iwd~~~~~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D~--------~i~~wd~~~~ 224 (410)
T 1vyh_C 162 GKLLASCSAD-------MTIKLWDFQGFECIR--TMHGHDHNVSSVSIMPNGDHIVSASRDK--------TIKMWEVQTG 224 (410)
T ss_dssp SSEEEEEETT-------SCCCEEETTSSCEEE--CCCCCSSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTC
T ss_pred CCEEEEEeCC-------CeEEEEeCCCCceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCC
Confidence 4555555432 357788887654322 11111111222222 556666776654 7889999887
Q ss_pred ccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEE-------
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAAST------- 296 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~------- 296 (390)
. -...-..... . ...+.. .++.+++.|+ ....+.+||..+......-. . ......++..
T Consensus 225 ~----~~~~~~~h~~-~---v~~~~~~~~g~~l~s~s---~D~~v~vwd~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~ 291 (410)
T 1vyh_C 225 Y----CVKTFTGHRE-W---VRMVRPNQDGTLIASCS---NDQTVRVWVVATKECKAELR-E-HRHVVECISWAPESSYS 291 (410)
T ss_dssp C----EEEEEECCSS-C---EEEEEECTTSSEEEEEE---TTSCEEEEETTTCCEEEEEC-C-CSSCEEEEEECCSCGGG
T ss_pred c----EEEEEeCCCc-c---EEEEEECCCCCEEEEEc---CCCeEEEEECCCCceeeEec-C-CCceEEEEEEcCccccc
Confidence 6 3221111111 1 111221 2556665542 23446678887665432111 0 0000001110
Q ss_pred -------------eeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 297 -------------MNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 297 -------------~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
...|.+++.|+.++.+..||..+.. .+..+....... ++... +|+.++.|+.+..|.+||+.+
T Consensus 292 ~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 292 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp GGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred chhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 0236778888889999999988653 222222222222 33333 566667777788999999876
Q ss_pred C
Q 016368 362 S 362 (390)
Q Consensus 362 ~ 362 (390)
.
T Consensus 370 ~ 370 (410)
T 1vyh_C 370 K 370 (410)
T ss_dssp S
T ss_pred C
Confidence 5
No 106
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.70 E-value=0.097 Score=47.62 Aligned_cols=198 Identities=11% Similarity=0.092 Sum_probs=94.2
Q ss_pred eEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCCCccCeEEEE--ECCC
Q 016368 148 NLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GG-VVYVASGVGAHYRGDVARSMKKW--DLKS 223 (390)
Q Consensus 148 ~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~y--d~~t 223 (390)
..+++|.+.... ...-.++.+|+.+++.+.+... ....-..++.. ++ .||+.+.... ....+.+| |..+
T Consensus 14 ~~~~vg~y~~~~-~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~-----~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 14 LTMLVGTYTSGN-SKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSK-----DQAAVSAFAFDKEK 86 (361)
T ss_dssp EEEEEEECCSSS-CCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSS-----TTCEEEEEEEETTT
T ss_pred eEEEEEeccCCC-CCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCC-----CCCcEEEEEEeCCC
Confidence 345666554321 1112355567788887765443 11111122222 34 5777665321 12355555 4555
Q ss_pred CccccccEEcccCCCCCccccceEEEEECCE-EEEEcccCCCCceeEEEeCCCC-CeEecCC-----C-CCCC----C-C
Q 016368 224 DREDWKWEKKAQLKDGRFSREAVEAVGFKGN-LCMVNLKGNGAKDGAIYNVELD-KWKEMPE-----G-MHAG----W-N 290 (390)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~-lyv~gg~g~~~~~~~~yd~~~~-~W~~~~~-----~-~~~~----~-~ 290 (390)
+. .+.+...+..... ....+. +++ +|+.+ .....+.+|+..++ ....+.. . -+.+ . .
T Consensus 87 g~----~~~~~~~~~~~~~--p~~~~~-dg~~l~~~~---~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~ 156 (361)
T 3scy_A 87 GT----LHLLNTQKTMGAD--PCYLTT-NGKNIVTAN---YSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPH 156 (361)
T ss_dssp TE----EEEEEEEECSSSC--EEEEEE-CSSEEEEEE---TTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCC
T ss_pred Cc----EEEeeEeccCCCC--cEEEEE-CCCEEEEEE---CCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCc
Confidence 66 6666544321110 133333 665 55552 23455778888643 2211110 0 0000 0 1
Q ss_pred CceEEEeeCCe-EEEEeCCCCcEEEEECCCCc-------eEEc-----ccccccccceeEEEE-CC-EEEEEeeCCceEE
Q 016368 291 GPAASTMNEEE-LYVVNEGKGRLSKYDADHDW-------WDEV-----IELAELKGAEKITAA-RG-RVCAVCENGERIM 355 (390)
Q Consensus 291 ~~~~~~~~~g~-lyv~gg~~~~v~~yd~~~~~-------W~~i-----~~~p~~r~~~~~~~~-~g-~l~i~g~~~~~v~ 355 (390)
.+.++...+|+ ||+.+..++.+.+|+..... .... ...+.......++.. +| .+|+.+...+.+.
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 236 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVI 236 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEE
Confidence 12344334675 77777667788888766543 2211 112222222334443 55 4777755677899
Q ss_pred EEEcCCC
Q 016368 356 VVDVLAS 362 (390)
Q Consensus 356 ~~d~~~~ 362 (390)
+||+.+.
T Consensus 237 v~~~~~g 243 (361)
T 3scy_A 237 AFRYADG 243 (361)
T ss_dssp EEEEETT
T ss_pred EEEecCC
Confidence 9988743
No 107
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.1 Score=45.92 Aligned_cols=187 Identities=10% Similarity=0.046 Sum_probs=92.6
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKK 218 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~ 218 (390)
.++...+..++.++. -..+.+||....... +..... .-.++... ++..++.|+.+. .+.+
T Consensus 108 ~~~~~~~~~l~~~~~-------d~~i~~~d~~~~~~~-~~~~~~--~v~~~~~~~~~~~~l~~~~~d~--------~i~i 169 (313)
T 3odt_A 108 CSLSFQDGVVISGSW-------DKTAKVWKEGSLVYN-LQAHNA--SVWDAKVVSFSENKFLTASADK--------TIKL 169 (313)
T ss_dssp EEEEEETTEEEEEET-------TSEEEEEETTEEEEE-EECCSS--CEEEEEEEETTTTEEEEEETTS--------CEEE
T ss_pred EEEEecCCEEEEEeC-------CCCEEEEcCCcEEEe-cccCCC--ceeEEEEccCCCCEEEEEECCC--------CEEE
Confidence 455556777666653 245778882211111 111111 11122222 566666666554 6778
Q ss_pred EECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEee
Q 016368 219 WDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMN 298 (390)
Q Consensus 219 yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 298 (390)
||..... ..+........ ......-+++++..+ ....+.+||..+.+-...-. ........++...
T Consensus 170 ~d~~~~~-----~~~~~~~~~~i---~~~~~~~~~~~~~~~----~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~ 235 (313)
T 3odt_A 170 WQNDKVI-----KTFSGIHNDVV---RHLAVVDDGHFISCS----NDGLIKLVDMHTGDVLRTYE--GHESFVYCIKLLP 235 (313)
T ss_dssp EETTEEE-----EEECSSCSSCE---EEEEEEETTEEEEEE----TTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECT
T ss_pred EecCceE-----EEEeccCcccE---EEEEEcCCCeEEEcc----CCCeEEEEECCchhhhhhhh--cCCceEEEEEEec
Confidence 8843322 22222111111 122223466743332 33457789988664322111 0111112233223
Q ss_pred CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 299 EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+++ ++.++.++.+..||..+.+-...-..+.. ....+... +++ ++.++.++.+.+||+.+.
T Consensus 236 ~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 236 NGD-IVSCGEDRTVRIWSKENGSLKQVITLPAI-SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp TSC-EEEEETTSEEEEECTTTCCEEEEEECSSS-CEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred CCC-EEEEecCCEEEEEECCCCceeEEEeccCc-eEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 554 66777889999999988764443322211 12233333 566 455677789999999876
No 108
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.64 E-value=0.19 Score=45.90 Aligned_cols=188 Identities=7% Similarity=-0.098 Sum_probs=101.1
Q ss_pred eEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCC-CCCcceEEEEEC--CEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 148 NLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLS-IPRRWCAMGSVG--GVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 148 ~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~-~~r~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
.+++.|+.. ..+.+||..+.+....-... ....-.+++... +.+++.|+.+. .+.+||..+.
T Consensus 87 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKG-------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG--------ATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBT-------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT--------EEEEEETTSC
T ss_pred CEEEEEcCC-------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC--------EEEEEECCCC
Confidence 456665442 46889999887665443321 122222333333 46666666554 7889999877
Q ss_pred ccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe-E
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE-L 302 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~-l 302 (390)
. ...+......... ..+++. -++++++.|+ ....+.+||+....-..+.. ......+++...++. +
T Consensus 152 ~----~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~---h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 152 V----IQVFAKTDSWDYW--YCCVDVSVSRQMLATGD---STGRLLLLGLDGHEIFKEKL---HKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp E----EEEEECCCCSSCC--EEEEEEETTTTEEEEEE---TTSEEEEEETTSCEEEEEEC---SSSCEEEEEECSSCTTE
T ss_pred c----eEEEeccCCCCCC--eEEEEECCCCCEEEEEC---CCCCEEEEECCCCEEEEecc---CCCcEEEEEECCCCCCE
Confidence 6 5555433211110 122322 3556555532 23457789985443333322 111112233224565 8
Q ss_pred EEEeCCCCcEEEEECCCCc--eEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 303 YVVNEGKGRLSKYDADHDW--WDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 303 yv~gg~~~~v~~yd~~~~~--W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.++.++.+..||..+.. -..+..+.......++... ++..++.++.++.+.+||+.+.
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 8888889999999988622 1122222221222233332 5677777777889999998764
No 109
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.61 E-value=0.12 Score=52.86 Aligned_cols=211 Identities=9% Similarity=0.052 Sum_probs=117.1
Q ss_pred eEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeec-CeEEEEEeecCCCCCCCCCcEEEeCCCCceecC
Q 016368 101 EFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVR-NNLVLIAATTPHFLPALASPLAFNPQSNTWFFG 179 (390)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~ 179 (390)
.++.||+.++++..+..... +. . . ..++..+ ++.+.+|.. ..+++||+.+++|+..
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~-~~-~-------~------v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKN-EL-L-------D------VRVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHH 484 (781)
T ss_dssp EEEEECSSSCEEEECCSTTT-CC-C-------C------EEEEEECTTSEEEEEET--------TEEEEEESSSSSCCEE
T ss_pred CEEEEcCCCCcEEEeccCCC-CC-C-------e------EEEEEECCCCCEEEEEC--------CceEEEeCCCCeEEec
Confidence 57788888888777653211 11 0 0 1333333 455555532 4689999999888664
Q ss_pred CCCC---CCCcc-eEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc---CCCCCccccceEEEE-
Q 016368 180 PQLS---IPRRW-CAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ---LKDGRFSREAVEAVG- 250 (390)
Q Consensus 180 ~~~~---~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~---~~~~~~~r~~~~~~~- 250 (390)
.... ..... .++... ++.|++.. .. ..+.+||+.++. ++.... ++... ..+++.
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt-~~--------~Gl~~~~~~~~~----~~~~~~~~~l~~~~----i~~i~~d 547 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGT-FG--------GGVGIYTPDMQL----VRKFNQYEGFCSNT----INQIYRS 547 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEE-SS--------SCEEEECTTCCE----EEEECTTTTCSCSC----EEEEEEC
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEE-cC--------CCEEEEeCCCCe----EEEccCCCCCCCCe----eEEEEEC
Confidence 3222 11111 122222 56777643 21 257889999888 776543 22211 133333
Q ss_pred ECCEEEEEcccCCCCcee-EEEeCCCCCeEecCC--CCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEccc
Q 016368 251 FKGNLCMVNLKGNGAKDG-AIYNVELDKWKEMPE--GMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIE 327 (390)
Q Consensus 251 ~~g~lyv~gg~g~~~~~~-~~yd~~~~~W~~~~~--~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~ 327 (390)
.+|.+++-. .... ..||+.+++++.... .++... ..+++...+|.|++.+ .+.+.+||+++.++.....
T Consensus 548 ~~g~lWi~T-----~~Glv~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~ 619 (781)
T 3v9f_A 548 SKGQMWLAT-----GEGLVCFPSARNFDYQVFQRKEGLPNTH-IRAISEDKNGNIWAST--NTGISCYITSKKCFYTYDH 619 (781)
T ss_dssp TTSCEEEEE-----TTEEEEESCTTTCCCEEECGGGTCSCCC-CCEEEECSSSCEEEEC--SSCEEEEETTTTEEEEECG
T ss_pred CCCCEEEEE-----CCCceEEECCCCCcEEEccccCCCCCce-EEEEEECCCCCEEEEc--CCceEEEECCCCceEEecc
Confidence 367777763 2345 688999888876543 132222 2344432468888765 3468999999988877653
Q ss_pred c---cccccc-eeEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 328 L---AELKGA-EKITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 328 ~---p~~r~~-~~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
. +..... .++... +|+||+-+. +.+..+|+..
T Consensus 620 ~dGl~~~~f~~~~~~~~~~G~l~~g~~--~Gl~~f~p~~ 656 (781)
T 3v9f_A 620 SNNIPQGSFISGCVTKDHNGLIYFGSI--NGLCFFNPDI 656 (781)
T ss_dssp GGTCCSSCEEEEEEEECTTSCEEEEET--TEEEEECSCC
T ss_pred cCCccccccccCceEECCCCEEEEECC--CceEEEChhh
Confidence 2 222111 223333 678877432 3577787754
No 110
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.60 E-value=0.2 Score=46.73 Aligned_cols=190 Identities=9% Similarity=0.014 Sum_probs=98.5
Q ss_pred eEEeec--CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcc-eEEEEE-CCEEEEEeccCCCCCCCccCeE
Q 016368 141 QSLGVR--NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRW-CAMGSV-GGVVYVASGVGAHYRGDVARSM 216 (390)
Q Consensus 141 ~~~~~~--~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 216 (390)
.++... +.+++.|+. -..+.+||..+++.... +...... .+++.. ++++++.|+.+. .+
T Consensus 112 ~~~~~~p~~~~l~s~s~-------Dg~i~vwd~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D~--------~i 174 (410)
T 1vyh_C 112 TRVIFHPVFSVMVSASE-------DATIKVWDYETGDFERT--LKGHTDSVQDISFDHSGKLLASCSADM--------TI 174 (410)
T ss_dssp EEEEECSSSSEEEEEES-------SSCEEEEETTTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETTS--------CC
T ss_pred EEEEEcCCCCEEEEEeC-------CCeEEEEECCCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCCC--------eE
Confidence 444443 355555543 24688999887754321 1111111 122222 567777777664 56
Q ss_pred EEEECCCCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEE
Q 016368 217 KKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAAS 295 (390)
Q Consensus 217 ~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 295 (390)
.+||..+.. .+..+...... -.+++.. ++..++.|+ ....+.+||..++.-...-. . .......+.
T Consensus 175 ~iwd~~~~~------~~~~~~~h~~~--V~~v~~~p~~~~l~s~s---~D~~i~~wd~~~~~~~~~~~-~-h~~~v~~~~ 241 (410)
T 1vyh_C 175 KLWDFQGFE------CIRTMHGHDHN--VSSVSIMPNGDHIVSAS---RDKTIKMWEVQTGYCVKTFT-G-HREWVRMVR 241 (410)
T ss_dssp CEEETTSSC------EEECCCCCSSC--EEEEEECSSSSEEEEEE---TTSEEEEEETTTCCEEEEEE-C-CSSCEEEEE
T ss_pred EEEeCCCCc------eeEEEcCCCCC--EEEEEEeCCCCEEEEEe---CCCeEEEEECCCCcEEEEEe-C-CCccEEEEE
Confidence 788887655 22222211110 1223322 555555531 23557789988765322111 0 111111222
Q ss_pred EeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE----------------------CCEEEEEeeCCce
Q 016368 296 TMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA----------------------RGRVCAVCENGER 353 (390)
Q Consensus 296 ~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~----------------------~g~l~i~g~~~~~ 353 (390)
...++.+++.|+.++.+..||..+...... +........++.+ .|.+++.|+.++.
T Consensus 242 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQTVRVWVVATKECKAE--LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceeeE--ecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 225788889999999999999987654332 1111111111111 2556777777888
Q ss_pred EEEEEcCCC
Q 016368 354 IMVVDVLAS 362 (390)
Q Consensus 354 v~~~d~~~~ 362 (390)
|.+||+.+.
T Consensus 320 i~iwd~~~~ 328 (410)
T 1vyh_C 320 IKMWDVSTG 328 (410)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 999998764
No 111
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.60 E-value=0.34 Score=42.68 Aligned_cols=192 Identities=10% Similarity=0.016 Sum_probs=98.2
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcc-eEEEEE---CCEEEEEeccCCCCCCCccCeEEEEEC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRW-CAMGSV---GGVVYVASGVGAHYRGDVARSMKKWDL 221 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~-~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~ 221 (390)
++..++.|+.. ..+.+||..+.+.+.+..+...... .+++.. ++.+++.|+.+. .+.+||.
T Consensus 20 ~g~~las~s~D-------~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~--------~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVMIWKE 84 (297)
T ss_dssp TSSEEEEEETT-------SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT--------EEEEEEB
T ss_pred CCCEEEEEeCC-------CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC--------EEEEEEc
Confidence 34566655432 3578888875544333322211111 122222 256777777664 7889999
Q ss_pred CCCccccccEEcccCCCCCccccceEEEEE-C--CEEEEEcccCCCCceeEEEeCCCCC-eEecCCCCCCCCCCceEEEe
Q 016368 222 KSDREDWKWEKKAQLKDGRFSREAVEAVGF-K--GNLCMVNLKGNGAKDGAIYNVELDK-WKEMPEGMHAGWNGPAASTM 297 (390)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~--g~lyv~gg~g~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~ 297 (390)
.++. |..+..+...... ..+++.. + +.+.+.|+ ....+.+||..+.. +..... ........++...
T Consensus 85 ~~~~----~~~~~~~~~h~~~--v~~v~~~p~~~g~~l~s~s---~d~~v~~wd~~~~~~~~~~~~-~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 85 ENGR----WSQIAVHAVHSAS--VNSVQWAPHEYGPMLLVAS---SDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWA 154 (297)
T ss_dssp SSSC----BCCCEEECCCSSC--EEEEEECCGGGCSEEEEEE---TTSEEEEEEBCSSSCBCCEEE-ECCSSCEEEEEEC
T ss_pred CCCc----eEEEEEeecCCCc--eeEEEeCcCCCCcEEEEEE---CCCcEEEEEecCCCceeeeee-ecccCccceEeec
Confidence 9887 7655433211110 1222222 1 45555531 23446678876542 211100 0000000111110
Q ss_pred -------------eCCeEEEEeCCCCcEEEEECCCCc--eEEcccccccccceeEEEE--C---CEEEEEeeCCceEEEE
Q 016368 298 -------------NEEELYVVNEGKGRLSKYDADHDW--WDEVIELAELKGAEKITAA--R---GRVCAVCENGERIMVV 357 (390)
Q Consensus 298 -------------~~g~lyv~gg~~~~v~~yd~~~~~--W~~i~~~p~~r~~~~~~~~--~---g~l~i~g~~~~~v~~~ 357 (390)
.++++++.|+.++.+..||..+.. |..+..+.........+.+ + +.+++.++.+..|.+|
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 125688888889988888876543 6555555444333333333 2 3667776778889999
Q ss_pred EcCCC
Q 016368 358 DVLAS 362 (390)
Q Consensus 358 d~~~~ 362 (390)
|+...
T Consensus 235 d~~~~ 239 (297)
T 2pm7_B 235 TQDNE 239 (297)
T ss_dssp EESST
T ss_pred EeCCC
Confidence 98763
No 112
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.59 E-value=0.14 Score=46.62 Aligned_cols=189 Identities=12% Similarity=0.100 Sum_probs=96.6
Q ss_pred ecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCC-CC-Ccc-eEEEEE-CCEEEEEeccCCCCCCCccCeEEEEE
Q 016368 145 VRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLS-IP-RRW-CAMGSV-GGVVYVASGVGAHYRGDVARSMKKWD 220 (390)
Q Consensus 145 ~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~-~~-r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd 220 (390)
..++.++.|+. -..+.+||..+++-....... .. ... .+++.. +++.++.|+.+. .+.+||
T Consensus 91 s~d~~l~~~s~-------dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~--------~i~iwd 155 (344)
T 4gqb_B 91 VGERGILVASD-------SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI--------CIKVWD 155 (344)
T ss_dssp ETTTEEEEEET-------TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEE
T ss_pred eCCCeEEEEEC-------CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC--------eEEEEE
Confidence 34455555533 246888998877532221110 01 111 122222 667777777654 688999
Q ss_pred CCCCccccccEEcccCCCCCccccceEEEE-ECC-EEEEEcccCCCCceeEEEeCCCCCeEe-cCCCCCCCCCCceEEE-
Q 016368 221 LKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKG-NLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGMHAGWNGPAAST- 296 (390)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~- 296 (390)
..++. - +..+...... -.+++. .++ .+++.|+ ....+.+||..+.+-.. +.. ........+++.
T Consensus 156 ~~~~~----~--~~~~~~h~~~--V~~~~~~~~~~~~l~s~s---~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~ 223 (344)
T 4gqb_B 156 LAQQV----V--LSSYRAHAAQ--VTCVAASPHKDSVFLSCS---EDNRILLWDTRCPKPASQIGC-SAPGYLPTSLAWH 223 (344)
T ss_dssp TTTTE----E--EEEECCCSSC--EEEEEECSSCTTEEEEEE---TTSCEEEEETTSSSCEEECC-----CCCEEEEEEC
T ss_pred CCCCc----E--EEEEcCcCCc--eEEEEecCCCCCceeeec---cccccccccccccceeeeeec-ceeeccceeeeec
Confidence 98876 2 2222211110 122332 233 3555531 23457789998765433 222 111111112222
Q ss_pred eeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--CC-EEEEEeeCCceEEEEEcCCC
Q 016368 297 MNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RG-RVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 297 ~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g-~l~i~g~~~~~v~~~d~~~~ 362 (390)
..++++++.|+.++.+..||..+.+ .+..+.........+.+ ++ ++++.|+.+..|.+||+.+.
T Consensus 224 p~~~~~l~sg~~dg~v~~wd~~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 224 PQQSEVFVFGDENGTVSLVDTKSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp SSCTTEEEEEETTSEEEEEESCC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred CCCCcceEEeccCCcEEEEECCCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 1267788889889999999988653 33333333333333333 34 55666677778999998765
No 113
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.54 E-value=0.3 Score=43.18 Aligned_cols=185 Identities=5% Similarity=0.017 Sum_probs=94.8
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcc-eEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRW-CAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKS 223 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 223 (390)
++..++.|+. -..+.+||..+++-.. .+...... .+++.. ++.+++.|+.+. .+.+||..+
T Consensus 66 ~~~~l~s~s~-------d~~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~sgs~D~--------~v~lWd~~~ 128 (304)
T 2ynn_A 66 RKNWIIVGSD-------DFRIRVFNYNTGEKVV--DFEAHPDYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWEN 128 (304)
T ss_dssp GGTEEEEEET-------TSEEEEEETTTCCEEE--EEECCSSCEEEEEECSSSSEEEEEETTS--------CEEEEEGGG
T ss_pred CCCEEEEECC-------CCEEEEEECCCCcEEE--EEeCCCCcEEEEEEcCCCCEEEEECCCC--------eEEEEECCC
Confidence 3455555543 2468889988764321 11111111 122222 456666666654 678899877
Q ss_pred CccccccEEcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCC--eEecCCCCCCCCCCceEEE--e
Q 016368 224 DREDWKWEKKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDK--WKEMPEGMHAGWNGPAAST--M 297 (390)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~--~ 297 (390)
+. .....+..... .-.+++.. ++.+++.|+ ....+.+||..+.. ...... .......+.. .
T Consensus 129 ~~-----~~~~~~~~h~~--~v~~v~~~p~~~~~l~sgs---~D~~v~iwd~~~~~~~~~~~~~---~~~~v~~~~~~~~ 195 (304)
T 2ynn_A 129 NW-----ALEQTFEGHEH--FVMCVAFNPKDPSTFASGC---LDRTVKVWSLGQSTPNFTLTTG---QERGVNYVDYYPL 195 (304)
T ss_dssp TT-----EEEEEECCCCS--CEEEEEECTTCTTEEEEEE---TTSEEEEEETTCSSCSEEEECC---CTTCEEEEEECCS
T ss_pred Cc-----chhhhhcccCC--cEEEEEECCCCCCEEEEEe---CCCeEEEEECCCCCccceeccC---CcCcEEEEEEEEc
Confidence 53 32222211111 01233332 345555532 23456788886542 111111 1111111221 1
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.++.+++.|+.++.+..||..+.+ .+..+.........+.+ ++.+++.|+.+..|.+||+.+.
T Consensus 196 ~~~~~l~s~s~D~~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 196 PDKPYMITASDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp TTCCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCEEEEEcCCCeEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 256788888889999999998754 33333333333333333 5667777777889999998764
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.28 Score=46.18 Aligned_cols=149 Identities=7% Similarity=-0.003 Sum_probs=78.0
Q ss_pred CCE-EEEEeccCCCCCCCccCeEEEEECC--CCccccccEE-cccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeE
Q 016368 195 GGV-VYVASGVGAHYRGDVARSMKKWDLK--SDREDWKWEK-KAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGA 269 (390)
Q Consensus 195 ~~~-lyv~GG~~~~~~~~~~~~~~~yd~~--t~~~~~~W~~-~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~ 269 (390)
+++ |++.|+.+. .+.+||.. ++. -.. +........ ..+++.. +++..+.|+ ....+.
T Consensus 113 d~~~l~~~~~~dg--------~v~iwd~~~~~~~----~~~~~~~~~~~~~---v~~~~~sp~~~~l~~~~---~~g~v~ 174 (450)
T 2vdu_B 113 DESRLIACADSDK--------SLLVFDVDKTSKN----VLKLRKRFCFSKR---PNAISIAEDDTTVIIAD---KFGDVY 174 (450)
T ss_dssp TSSEEEEEEGGGT--------EEEEEEECSSSSS----CEEEEEEEECSSC---EEEEEECTTSSEEEEEE---TTSEEE
T ss_pred CCCEEEEEECCCC--------eEEEEECcCCCCc----eeeeeecccCCCC---ceEEEEcCCCCEEEEEe---CCCcEE
Confidence 444 467776654 68889987 544 222 211011111 1223322 566555542 123456
Q ss_pred EEeCCCCCeEe-cCCCCC-CCCCCceEEEeeC---CeEEEEeCCCCcEEEEECCCCceEEcccccccccc-eeEEEECCE
Q 016368 270 IYNVELDKWKE-MPEGMH-AGWNGPAASTMNE---EELYVVNEGKGRLSKYDADHDWWDEVIELAELKGA-EKITAARGR 343 (390)
Q Consensus 270 ~yd~~~~~W~~-~~~~~~-~~~~~~~~~~~~~---g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~-~~~~~~~g~ 343 (390)
++|..+..-.. ....+. ......+++...+ +++++.|+.++.+.+||..+....... +...... ..++..+++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~sd~~ 253 (450)
T 2vdu_B 175 SIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW-LFGHKHFVSSICCGKDY 253 (450)
T ss_dssp EEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE-CCCCSSCEEEEEECSTT
T ss_pred EEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee-ecCCCCceEEEEECCCC
Confidence 77776554332 111011 1111122232356 888888988999999998876533221 1111121 222222677
Q ss_pred EEEEeeCCceEEEEEcCCC
Q 016368 344 VCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 344 l~i~g~~~~~v~~~d~~~~ 362 (390)
+++.|+.+..|.+||+.+.
T Consensus 254 ~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp EEEEEESSSEEEEEETTTC
T ss_pred EEEEEeCCCeEEEEECCCC
Confidence 7777777889999999876
No 115
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.53 E-value=0.52 Score=45.89 Aligned_cols=269 Identities=8% Similarity=-0.021 Sum_probs=129.6
Q ss_pred CCCcHHHHHHHHhcCC-------chhhHhhhHhHHHhhc------CCCCC--CcccEEEEeecCCCCCCCCCCcccCCCc
Q 016368 35 PGLPNHLADRCLSSLP-------PALLFSVCHSWRRLLY------SPYFP--PFFSLYALLFNNNKPSHNNNNYYSFNSS 99 (390)
Q Consensus 35 ~~LP~dl~~~iL~rLP-------l~~~r~Vck~W~~l~~------s~~f~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 99 (390)
..|.++-+..|...|- ...+..+.+.|..+.. .|.+. ....+|+.... .
T Consensus 95 ~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~p~~~~~vs~~~----------------d 158 (543)
T 1nir_A 95 GELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRD----------------A 158 (543)
T ss_dssp TSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCSSCCSCCCGGGEEEEEEGG----------------G
T ss_pred cCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCcccccccCCCCEEEEEEcC----------------C
Confidence 3588888888776664 2233455566654431 11221 12334443322 2
Q ss_pred eeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceE-EeecCeEEEEEeecCCCCCCCCCcEEEeC--CCCce
Q 016368 100 MEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQS-LGVRNNLVLIAATTPHFLPALASPLAFNP--QSNTW 176 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gG~~~~~~~~~~~~~~~dp--~t~~W 176 (390)
..+.++|..+++-...-.... ..+ .+ +.-+++.+++++. . +.+.+||+ .+.+-
T Consensus 159 ~~V~v~D~~t~~~~~~i~~g~--~~~---------------~v~~spdg~~l~v~~~-----d--~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 159 GQIALVDGDSKKIVKVIDTGY--AVH---------------ISRMSASGRYLLVIGR-----D--ARIDMIDLWAKEPTK 214 (543)
T ss_dssp TEEEEEETTTCCEEEEEECST--TEE---------------EEEECTTSCEEEEEET-----T--SEEEEEETTSSSCEE
T ss_pred CeEEEEECCCceEEEEEecCc--ccc---------------eEEECCCCCEEEEECC-----C--CeEEEEECcCCCCcE
Confidence 357778988775433211111 111 22 2224556666543 1 67999999 66543
Q ss_pred ecCCCCCCCCcceEEEEE-----CCE-EEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC--CC-----Cccc
Q 016368 177 FFGPQLSIPRRWCAMGSV-----GGV-VYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK--DG-----RFSR 243 (390)
Q Consensus 177 ~~~~~~~~~r~~~~~~~~-----~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~--~~-----~~~r 243 (390)
. ..++....-..++.. +++ ||+.+..+ ..+.++|..+.+. -..++... .. ..++
T Consensus 215 ~--~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~--------~~v~v~D~~t~~~---~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 215 V--AEIKIGIEARSVESSKFKGYEDRYTIAGAYWP--------PQFAIMDGETLEP---KQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp E--EEEECCSEEEEEEECCSTTCTTTEEEEEEEES--------SEEEEEETTTCCE---EEEEECCEECSSSCCEESCCC
T ss_pred E--EEEecCCCcceEEeCCCcCCCCCEEEEEEccC--------CeEEEEecccccc---ceeecccCcccCccccccCCc
Confidence 2 222222222333333 454 55543222 3678899887651 12222111 00 0000
Q ss_pred cceEEEE-ECC-EEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe-EEEEeCCCCcEEEEECCCC
Q 016368 244 EAVEAVG-FKG-NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE-LYVVNEGKGRLSKYDADHD 320 (390)
Q Consensus 244 ~~~~~~~-~~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd~~~~ 320 (390)
..+++. .++ .+|+. . .+...+.++|..+.+-..+.. .+.+..-+.++...+|+ +|+....++.+.++|.++.
T Consensus 282 -v~~i~~s~~~~~~~vs-~--~~~g~i~vvd~~~~~~l~~~~-i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 282 -VAAIIASHEHPEFIVN-V--KETGKVLLVNYKDIDNLTVTS-IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp -EEEEEECSSSSEEEEE-E--TTTTEEEEEECTTSSSCEEEE-EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred -eEEEEECCCCCEEEEE-E--CCCCeEEEEEecCCCcceeEE-eccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 122332 234 44444 2 234567788887643211111 11222223333325666 5555556778999999987
Q ss_pred ceEEcc---cccccccceeEEEE-CCEEEEEee-CCceEEEEEcCC
Q 016368 321 WWDEVI---ELAELKGAEKITAA-RGRVCAVCE-NGERIMVVDVLA 361 (390)
Q Consensus 321 ~W~~i~---~~p~~r~~~~~~~~-~g~l~i~g~-~~~~v~~~d~~~ 361 (390)
+-...- ..|.+.....+..- ++.+|+.+. +.+.|.+||+.+
T Consensus 357 ~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 357 RLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred eEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 644322 22222122222222 477888765 456899999876
No 116
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.53 E-value=0.44 Score=44.53 Aligned_cols=181 Identities=13% Similarity=-0.004 Sum_probs=99.2
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
+.+.++|+.+++-..+.... ...+ .+.. ++.||+...... ..++++|+.++.. ...+........
T Consensus 152 ~~I~~id~~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~~-------~~I~~~d~~~~~~---~~~~g~~~~~~~ 218 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEGT-------HTVYVYMKASGWA---PTRIGQLGSTFS 218 (409)
T ss_dssp TEEEEEETTTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSSTT-------CEEEEEEGGGTTC---EEEEEECCTTSC
T ss_pred CcEEEEECCCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCCC-------ceEEEEEcCCCce---eEEeeeccchhc
Confidence 57899999988665543221 1112 2222 446777643221 2788999876541 223311111000
Q ss_pred cccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCC--CCCCCCCC--ceEEEee-CCeEEEEeCCCCcEEE
Q 016368 242 SREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPE--GMHAGWNG--PAASTMN-EEELYVVNEGKGRLSK 314 (390)
Q Consensus 242 ~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~--~~~~~~~~--~~~~~~~-~g~lyv~gg~~~~v~~ 314 (390)
. ...++++. ++.||+.. ....+.+||+.+..-..+.. ........ ..+++.. ++.||+.....+.|++
T Consensus 219 ~-~p~~iav~p~~g~lyv~d----~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~ 293 (409)
T 3hrp_A 219 G-KIGAVALDETEEWLYFVD----SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYK 293 (409)
T ss_dssp S-CCCBCEECTTSSEEEEEC----TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred C-CcEEEEEeCCCCeEEEEE----CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEE
Confidence 0 01334433 68899963 23457899998876554411 01111112 1445423 6899999988889999
Q ss_pred EECCCCceEEcccc------------cccccceeEEEE-CCEEEEEee-CCceEEEEEcCCC
Q 016368 315 YDADHDWWDEVIEL------------AELKGAEKITAA-RGRVCAVCE-NGERIMVVDVLAS 362 (390)
Q Consensus 315 yd~~~~~W~~i~~~------------p~~r~~~~~~~~-~g~l~i~g~-~~~~v~~~d~~~~ 362 (390)
||.....-...... .......+++.. +|.||+.-. .+..|..+|+.+.
T Consensus 294 ~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 294 ITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp ECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred EecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 99876522222211 001223455555 678999866 6778999996543
No 117
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.53 E-value=0.17 Score=51.57 Aligned_cols=178 Identities=8% Similarity=-0.007 Sum_probs=99.4
Q ss_pred CCcEEEeCCCCceecCCCCCCC-CcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC-C
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIP-RRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG-R 240 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~-~ 240 (390)
..+++||+.+++++.......+ ..-.++... ++.|++... ..+.+||+.++. |+........ .
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~----~~~~~~~~~~~~ 492 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH----------AGVFVIDLASKK----VIHHYDTSNSQL 492 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET----------TEEEEEESSSSS----CCEEECTTTSSC
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC----------CceEEEeCCCCe----EEecccCccccc
Confidence 4688999999998877532111 111222222 577877431 368899999988 8765433210 0
Q ss_pred ccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCC-CCceEEEeeCCeEEEEeCCCCcEEEEECC
Q 016368 241 FSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGW-NGPAASTMNEEELYVVNEGKGRLSKYDAD 318 (390)
Q Consensus 241 ~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~-~~~~~~~~~~g~lyv~gg~~~~v~~yd~~ 318 (390)
......+++. .+|.+++-. ......+||+.+++++........+. ...+++...+|.|++-.. .|-+.+||++
T Consensus 493 ~~~~i~~i~~d~~g~lWigt----~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~ 567 (781)
T 3v9f_A 493 LENFVRSIAQDSEGRFWIGT----FGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSAR 567 (781)
T ss_dssp SCSCEEEEEECTTCCEEEEE----SSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTT
T ss_pred ccceeEEEEEcCCCCEEEEE----cCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCC
Confidence 0000123332 256777653 12346789999988887653111111 112222223678876654 3333999999
Q ss_pred CCceEEcccccccc--cceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 319 HDWWDEVIELAELK--GAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 319 ~~~W~~i~~~p~~r--~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++++.......... ...+++.- +|.|++-+ .+.+..+|+.+.
T Consensus 568 ~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~ 612 (781)
T 3v9f_A 568 NFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTGISCYITSKK 612 (781)
T ss_dssp TCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSCEEEEETTTT
T ss_pred CCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCceEEEECCCC
Confidence 99887765322111 12344443 68888864 345778887755
No 118
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.51 E-value=0.41 Score=42.55 Aligned_cols=170 Identities=12% Similarity=-0.019 Sum_probs=87.6
Q ss_pred CcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc----CCCC
Q 016368 165 SPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ----LKDG 239 (390)
Q Consensus 165 ~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~----~~~~ 239 (390)
.++++|+.+++.+.+...+..+.....+.. ++.+|+.-. ....++++|+.+.... .|..-+. .+..
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~--------~~g~i~~~d~~~~~~~-v~~~~~~~~~~~~~~ 166 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS--------YRGAIWLIDVVQPSGS-IWLEHPMLARSNSES 166 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET--------TTTEEEEEETTTTEEE-EEEECGGGSCSSTTC
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC--------CCCeEEEEeCCCCcEe-EEEECCccccccccC
Confidence 488899888887665444433333333333 556777531 2347889998764200 0211111 1111
Q ss_pred CccccceEEEEECCEEEEEcccCCCCceeEEEeCCC-CCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECC
Q 016368 240 RFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVEL-DKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDAD 318 (390)
Q Consensus 240 ~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~ 318 (390)
... ....+..-++.+|+. ......+.+||... .+...... ......-..+++..+|+||+.....+.|.+||++
T Consensus 167 ~~~-~pngis~dg~~lyv~---d~~~~~I~~~~~~~~g~~~~~~~-~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 167 VFP-AANGLKRFGNFLYVS---NTEKMLLLRIPVDSTDKPGEPEI-FVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp CSC-SEEEEEEETTEEEEE---ETTTTEEEEEEBCTTSCBCCCEE-EEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CCC-cCCCcCcCCCEEEEE---eCCCCEEEEEEeCCCCCCCccEE-EeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 000 013333345579988 33456788999865 22211110 0001112344443578999988777899999987
Q ss_pred CCceEEccccccc-ccceeEEEE-----CCEEEEEee
Q 016368 319 HDWWDEVIELAEL-KGAEKITAA-----RGRVCAVCE 349 (390)
Q Consensus 319 ~~~W~~i~~~p~~-r~~~~~~~~-----~g~l~i~g~ 349 (390)
.+...+...+.. ....+++.- ++.|||...
T Consensus 242 -G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 242 -RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp -CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred -CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 444444333322 233344432 267888753
No 119
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.51 E-value=0.27 Score=45.82 Aligned_cols=178 Identities=12% Similarity=0.026 Sum_probs=97.1
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
+.+.+.++....+..+.+ ....-.++++. +++||+.-- ....+.++++.........+.+.......
T Consensus 92 ~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~--------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~- 160 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDL--------SQRMICSTQLDRAHGVSSYDTVISRDIQA- 160 (400)
T ss_dssp TEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEET--------TTTEEEEEEC------CCCEEEECSSCSC-
T ss_pred ceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEec--------CCCeEEEEEcccCCCCCcceEEEeCCCCC-
Confidence 567778887776655422 12222344444 689998732 33478888886521000023322211111
Q ss_pred cccceEEEE--ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCc-eEEE-eeCCeEEEEeCC-CCcEEEEE
Q 016368 242 SREAVEAVG--FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGP-AAST-MNEEELYVVNEG-KGRLSKYD 316 (390)
Q Consensus 242 ~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~-~~~g~lyv~gg~-~~~v~~yd 316 (390)
..+.++ .+++||+.- .....+.++|++...-+.+.. .....+ .+++ ..+|.||+.... .+.|++++
T Consensus 161 ---p~glavD~~~~~lY~~d---~~~~~I~~~~~~g~~~~~l~~---~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~ 231 (400)
T 3p5b_L 161 ---PDGLAVDWIHSNIYWTD---SVLGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 231 (400)
T ss_dssp ---EEEEEEETTTTEEEEEE---TTTTEEEEECTTTCSEEEEEE---CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEE
T ss_pred ---cccEEEEecCCceEEEE---CCCCeEEEEeCCCCceEEEEe---CCCCCcceEEEecccCeEEEEeCCCCCEEEEEe
Confidence 134444 378999982 234567889988765444432 111112 3343 137899998743 46899999
Q ss_pred CCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 317 ADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 317 ~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+....=..+.. .......++++- +++||+.=.....|+.+|+...
T Consensus 232 ~dG~~~~~~~~-~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 232 LNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp TTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCCccEEEEE-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 88644333321 112233456654 7889988555667888887654
No 120
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.50 E-value=0.33 Score=43.29 Aligned_cols=59 Identities=10% Similarity=-0.022 Sum_probs=35.2
Q ss_pred CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-C-CEEEEEeeCCceEEEEEcCCC
Q 016368 299 EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-R-GRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~-g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+|+.++++ ++.+.+||.++.+-.... +.......++.. + +.||+ ++..+.+.+||+.+.
T Consensus 266 dg~~l~~~--~~~v~~~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~-~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 266 DPNQIYGV--LNRLAKYDLKQRKLIKAA--NLDHTYYCVAFDKKGDKLYL-GGTFNDLAVFNPDTL 326 (349)
T ss_dssp CTTEEEEE--ESEEEEEETTTTEEEEEE--ECSSCCCEEEECSSSSCEEE-ESBSSEEEEEETTTT
T ss_pred CCCEEEEE--cCeEEEEECccCeEEEEE--cCCCCccceEECCCCCEEEE-ecCCCeEEEEecccc
Confidence 55444444 668999999876543322 222223344444 3 45776 455678999999765
No 121
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.50 E-value=0.04 Score=50.36 Aligned_cols=173 Identities=5% Similarity=-0.041 Sum_probs=87.5
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcce-EEEEE-C-CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEE-cccCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWC-AMGSV-G-GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEK-KAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~-~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~-~~~~~~~ 239 (390)
..+.+||..+++-... +......- +++.. + ..+++.|+.+. .+.+||..+.+ -.. +......
T Consensus 149 ~~i~iwd~~~~~~~~~--~~~h~~~V~~~~~~~~~~~~l~s~s~D~--------~v~iwd~~~~~----~~~~~~~~~~~ 214 (344)
T 4gqb_B 149 ICIKVWDLAQQVVLSS--YRAHAAQVTCVAASPHKDSVFLSCSEDN--------RILLWDTRCPK----PASQIGCSAPG 214 (344)
T ss_dssp SCEEEEETTTTEEEEE--ECCCSSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTSSS----CEEECC----C
T ss_pred CeEEEEECCCCcEEEE--EcCcCCceEEEEecCCCCCceeeecccc--------ccccccccccc----eeeeeecceee
Confidence 3688999988754321 11111111 22222 3 35777777654 68899998876 322 2211111
Q ss_pred CccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCe-EecCCCCCCCCCCceEEEeeCC-eEEEEeCCCCcEEEE
Q 016368 240 RFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKW-KEMPEGMHAGWNGPAASTMNEE-ELYVVNEGKGRLSKY 315 (390)
Q Consensus 240 ~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~y 315 (390)
.. ..+++.. ++++++.|+ ....+.+||..+.+- ..+.. ......+++...++ ++++.|+.++.+.+|
T Consensus 215 ~~---~~~~~~~p~~~~~l~sg~---~dg~v~~wd~~~~~~~~~~~~---h~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 215 YL---PTSLAWHPQQSEVFVFGD---ENGTVSLVDTKSTSCVLSSAV---HSQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp CC---EEEEEECSSCTTEEEEEE---TTSEEEEEESCC--CCEEEEC---CSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred cc---ceeeeecCCCCcceEEec---cCCcEEEEECCCCcEEEEEcC---CCCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 11 1223322 456777642 224567899876531 11111 11111222321344 567778888999999
Q ss_pred ECCCCceEEcccccccccce-eEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 316 DADHDWWDEVIELAELKGAE-KITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 316 d~~~~~W~~i~~~p~~r~~~-~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
|..+.+-.. +..+.... +++.. +..+++-++.+..|.+|++.++
T Consensus 286 d~~~~~~~~---~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 286 DSSLSELFR---SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CTTCCEEEE---ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred ECCCCcEEE---EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 998764322 22222222 33332 3456666677789999998776
No 122
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.16 Score=46.72 Aligned_cols=186 Identities=7% Similarity=-0.035 Sum_probs=92.3
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCc
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDR 225 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~ 225 (390)
+.+++.++. -..+.+||........+.... ..-.+++.. +++.++.++.+. .+.+||..+..
T Consensus 120 ~~~l~~~~~-------dg~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~--------~i~iwd~~~~~ 182 (425)
T 1r5m_A 120 GNSIVTGVE-------NGELRLWNKTGALLNVLNFHR--APIVSVKWNKDGTHIISMDVEN--------VTILWNVISGT 182 (425)
T ss_dssp SSEEEEEET-------TSCEEEEETTSCEEEEECCCC--SCEEEEEECTTSSEEEEEETTC--------CEEEEETTTTE
T ss_pred CCEEEEEeC-------CCeEEEEeCCCCeeeeccCCC--ccEEEEEECCCCCEEEEEecCC--------eEEEEECCCCc
Confidence 455555543 246888884333333332211 111222222 455566665543 67889988766
Q ss_pred cccccEEcccCCCCCc-----------cc-cceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCce
Q 016368 226 EDWKWEKKAQLKDGRF-----------SR-EAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPA 293 (390)
Q Consensus 226 ~~~~W~~~~~~~~~~~-----------~r-~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~ 293 (390)
-...-....... .. .......-++.+++.+ ....+.+||..+.+-...-. ........
T Consensus 183 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~i~~~d~~~~~~~~~~~--~~~~~i~~ 252 (425)
T 1r5m_A 183 ----VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPG----PKGAIFVYQITEKTPTGKLI--GHHGPISV 252 (425)
T ss_dssp ----EEEEECCC---------------CCCBSCCEEEETTEEEEEC----GGGCEEEEETTCSSCSEEEC--CCSSCEEE
T ss_pred ----EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEc----CCCeEEEEEcCCCceeeeec--cCCCceEE
Confidence 332221111110 00 0111222355544442 23457789988763221111 01111122
Q ss_pred EEEeeCCeEEEEeCCCCcEEEEECCCCceEEccccccccc-ceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 294 ASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKG-AEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 294 ~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~-~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++...++.+++.++.++.+..||..+..-.. .+..... ...+... ++ +++.++.+..+.+||+.+.
T Consensus 253 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 253 LEFNDTNKLLLSASDDGTLRIWHGGNGNSQN--CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp EEEETTTTEEEEEETTSCEEEECSSSBSCSE--EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT
T ss_pred EEECCCCCEEEEEcCCCEEEEEECCCCccce--EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC
Confidence 3322578888888889999999988654222 2221222 2334444 45 6666677779999998765
No 123
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.48 E-value=0.39 Score=43.65 Aligned_cols=147 Identities=12% Similarity=0.079 Sum_probs=79.3
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE---CCEEEEEcccCCCCceeEEE
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF---KGNLCMVNLKGNGAKDGAIY 271 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~---~g~lyv~gg~g~~~~~~~~y 271 (390)
++..++.|+.+. .+.+||..+.. -...-.-.... ..+.... ++.+++.|+ ....+.+|
T Consensus 165 ~~~~l~t~s~D~--------~v~lwd~~~~~----~~~~~~~h~~~----v~~~~~~~~~~g~~l~sgs---~Dg~v~~w 225 (354)
T 2pbi_B 165 SDMQILTASGDG--------TCALWDVESGQ----LLQSFHGHGAD----VLCLDLAPSETGNTFVSGG---CDKKAMVW 225 (354)
T ss_dssp SSSEEEEEETTS--------EEEEEETTTCC----EEEEEECCSSC----EEEEEECCCSSCCEEEEEE---TTSCEEEE
T ss_pred CCCEEEEEeCCC--------cEEEEeCCCCe----EEEEEcCCCCC----eEEEEEEeCCCCCEEEEEe---CCCeEEEE
Confidence 344455555443 78899998876 32211111111 1222221 345555542 23457789
Q ss_pred eCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEee
Q 016368 272 NVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCE 349 (390)
Q Consensus 272 d~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~ 349 (390)
|+.+.+....-. . ......+++...++.+++.|+.++.+..||..+..-..+............+.+ ++.+.+.|+
T Consensus 226 d~~~~~~~~~~~-~-h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 226 DMRSGQCVQAFE-T-HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp ETTTCCEEEEEC-C-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCcEEEEec-C-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEE
Confidence 988776433211 1 111111222224788889999999999999987643222211111112222222 677888878
Q ss_pred CCceEEEEEcCCC
Q 016368 350 NGERIMVVDVLAS 362 (390)
Q Consensus 350 ~~~~v~~~d~~~~ 362 (390)
.+..|.+||+.+.
T Consensus 304 ~d~~i~vwd~~~~ 316 (354)
T 2pbi_B 304 NDYTINVWDVLKG 316 (354)
T ss_dssp TTSCEEEEETTTC
T ss_pred CCCcEEEEECCCC
Confidence 8889999998664
No 124
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.44 E-value=0.15 Score=44.83 Aligned_cols=178 Identities=11% Similarity=0.071 Sum_probs=93.4
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC-Cc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG-RF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~-~~ 241 (390)
..+++||+.++ .+..... . ..-.+++.. +++||+..... ..+.+||+.+++ .+.+...... ..
T Consensus 50 ~~i~~~~~~~~-~~~~~~~-~-~~~~~l~~~~dg~l~v~~~~~--------~~i~~~d~~~g~----~~~~~~~~~~~~~ 114 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHP-S-HHQNGHCLNKQGHLIACSHGL--------RRLERQREPGGE----WESIADSFEGKKL 114 (296)
T ss_dssp TEEEEEETTSC-EEEEESS-C-SSEEEEEECTTCCEEEEETTT--------TEEEEECSTTCC----EEEEECEETTEEC
T ss_pred CEEEEEECCCC-eEEEECC-C-CCcceeeECCCCcEEEEecCC--------CeEEEEcCCCCc----EEEEeeccCCCCC
Confidence 47899999987 5443221 1 111233332 67888764322 378999998888 6655322111 00
Q ss_pred cccceEEEEECCEEEEE----ccc----------CCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeC
Q 016368 242 SREAVEAVGFKGNLCMV----NLK----------GNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNE 307 (390)
Q Consensus 242 ~r~~~~~~~~~g~lyv~----gg~----------g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg 307 (390)
.+....++--+|++|+. |.. ......+..||+. ++...+...... ..+++...+|++++.+.
T Consensus 115 ~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~gi~~s~dg~~lv~~~ 190 (296)
T 3e5z_A 115 NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK---PNGLAFLPSGNLLVSDT 190 (296)
T ss_dssp CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS---EEEEEECTTSCEEEEET
T ss_pred CCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC---CccEEECCCCCEEEEeC
Confidence 00011222347889886 320 0012346677776 555544331111 12333325677776666
Q ss_pred CCCcEEEEECC-CCce-EEcccc-cccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 308 GKGRLSKYDAD-HDWW-DEVIEL-AELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 308 ~~~~v~~yd~~-~~~W-~~i~~~-p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
..+.+++||.. +.+. ...... .......+++.- +|.||+.. ++.|.+||+...
T Consensus 191 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~g~ 247 (296)
T 3e5z_A 191 GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPDGD 247 (296)
T ss_dssp TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTTSC
T ss_pred CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCCCC
Confidence 67799999986 4444 211111 111112244443 77888875 668888887643
No 125
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.42 E-value=0.045 Score=58.88 Aligned_cols=174 Identities=11% Similarity=0.062 Sum_probs=96.3
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSR 243 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r 243 (390)
..+.+||..+++..................-+++.++.|+.+. .+.+||..++. ...+......
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg--------~i~vwd~~~~~----~~~~~~~~~~---- 1046 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDS--------VIQVWNWQTGD----YVFLQAHQET---- 1046 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSS--------BEEEEETTTTE----EECCBCCSSC----
T ss_pred CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCc----eEEEecCCCc----
Confidence 4688899877654322111111111111122566666666554 68899999887 5543322211
Q ss_pred cceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCce
Q 016368 244 EAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWW 322 (390)
Q Consensus 244 ~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W 322 (390)
..+++.. +++++..+ ....+.+||..+.+-...-. ..... ..+++...+++.++.++.++.+..||..+..
T Consensus 1047 -v~~~~~~~~~~l~~~~----~dg~v~vwd~~~~~~~~~~~-~~~~~-v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~- 1118 (1249)
T 3sfz_A 1047 -VKDFRLLQDSRLLSWS----FDGTVKVWNVITGRIERDFT-CHQGT-VLSCAISSDATKFSSTSADKTAKIWSFDLLS- 1118 (1249)
T ss_dssp -EEEEEECSSSEEEEEE----SSSEEEEEETTTTCCCEEEE-CCSSC-CCCEEECSSSSSCEEECCSSCCCEECSSSSS-
T ss_pred -EEEEEEcCCCcEEEEE----CCCcEEEEECCCCceeEEEc-ccCCc-EEEEEECCCCCEEEEEcCCCcEEEEECCCcc-
Confidence 1233333 45554443 33457789988765322111 11111 1233333688888899989999999987644
Q ss_pred EEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 323 DEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 323 ~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+..+.........+.+ +|++.+.|+.++.|.+||+.+.
T Consensus 1119 -~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1119 -PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159 (1249)
T ss_dssp -CSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSS
T ss_pred -eeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 33333333333333333 7778888777788999998865
No 126
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.40 E-value=0.15 Score=45.36 Aligned_cols=192 Identities=15% Similarity=0.103 Sum_probs=93.2
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCC--CCceecCCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCCCccCeEEEEEC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQ--SNTWFFGPQLSIPRRWCAMGSV-GG-VVYVASGVGAHYRGDVARSMKKWDL 221 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~--t~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~ 221 (390)
++..+++++.. ...+.+|+.. +++++.+..++....-..++.. ++ .||+.+..+ ..+.+||.
T Consensus 48 dg~~l~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------~~i~~~d~ 113 (343)
T 1ri6_A 48 DKRYLYVGVRP------EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--------GNVSVTRL 113 (343)
T ss_dssp TSSEEEEEETT------TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--------TEEEEEEE
T ss_pred CCCEEEEeecC------CCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--------CeEEEEEC
Confidence 45555555431 1467777765 7777655443322222223332 44 466654322 36788888
Q ss_pred CCCccccccEEcccCCCCCccccceEEEE-ECC-EEEEEcccCCCCceeEEEeCCC-CCeEecC--C-CCCCCCCCceEE
Q 016368 222 KSDREDWKWEKKAQLKDGRFSREAVEAVG-FKG-NLCMVNLKGNGAKDGAIYNVEL-DKWKEMP--E-GMHAGWNGPAAS 295 (390)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g-~lyv~gg~g~~~~~~~~yd~~~-~~W~~~~--~-~~~~~~~~~~~~ 295 (390)
..+.. .+.+........ ...++. -+| .+|+.+ .....+.+||+.+ ++...+. . ..+.+.....++
T Consensus 114 ~~~~~---~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~---~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
T 1ri6_A 114 EDGLP---VGVVDVVEGLDG---CHSANISPDNRTLWVPA---LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMV 184 (343)
T ss_dssp ETTEE---EEEEEEECCCTT---BCCCEECTTSSEEEEEE---GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEE
T ss_pred CCCcc---ccccccccCCCC---ceEEEECCCCCEEEEec---CCCCEEEEEEecCCCceeeecccccccCCCCCcceEE
Confidence 42210 222222221111 122322 244 466652 1234577899887 6665332 1 011111111233
Q ss_pred EeeCCe-EEEEeCCCCcEEEEECC--CCceEEcc---ccccc----ccceeEEEE-CC-EEEEEeeCCceEEEEEcC
Q 016368 296 TMNEEE-LYVVNEGKGRLSKYDAD--HDWWDEVI---ELAEL----KGAEKITAA-RG-RVCAVCENGERIMVVDVL 360 (390)
Q Consensus 296 ~~~~g~-lyv~gg~~~~v~~yd~~--~~~W~~i~---~~p~~----r~~~~~~~~-~g-~l~i~g~~~~~v~~~d~~ 360 (390)
...+|+ +|+.+..++.+.+||.. +..+..+. .++.. .....++.. +| .||+.+..++.+.+||+.
T Consensus 185 ~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 185 FHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 224565 77777677889999984 34554332 22221 111233333 34 566665566789999987
No 127
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.31 Score=44.79 Aligned_cols=192 Identities=9% Similarity=0.051 Sum_probs=99.3
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCc------ee-cCCCCCCC-CcceEEEEE-C-CEEEEEeccCCCCCCCccCeE
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNT------WF-FGPQLSIP-RRWCAMGSV-G-GVVYVASGVGAHYRGDVARSM 216 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~------W~-~~~~~~~~-r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~ 216 (390)
+.+++.++. -..+.+||..+.+ -. .+...... ..-.+++.. + +.+++.|+.+. .+
T Consensus 126 ~~~l~s~~~-------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--------~v 190 (416)
T 2pm9_A 126 DNVLASGGN-------NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN--------FA 190 (416)
T ss_dssp TTBEEEECS-------SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSS--------CE
T ss_pred CCEEEEEcC-------CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCC--------CE
Confidence 455665543 2468888988765 11 11111111 111223333 2 56777776654 68
Q ss_pred EEEECCCCccccccEEcccCCCC----CccccceEEEEE-CC-EEEEEcccCCCCceeEEEeCCCCCeEecCCCCC--CC
Q 016368 217 KKWDLKSDREDWKWEKKAQLKDG----RFSREAVEAVGF-KG-NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMH--AG 288 (390)
Q Consensus 217 ~~yd~~t~~~~~~W~~~~~~~~~----~~~r~~~~~~~~-~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~--~~ 288 (390)
.+||..+.. -...-..... .. ...+++.. ++ .+++.++.+.....+.+||..+..-. +.. +. ..
T Consensus 191 ~iwd~~~~~----~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~ 262 (416)
T 2pm9_A 191 SIWDLKAKK----EVIHLSYTSPNSGIKQ--QLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-LQT-LNQGHQ 262 (416)
T ss_dssp EEEETTTTE----EEEEECCCCCSSCCCC--CEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-SBC-CCSCCS
T ss_pred EEEECCCCC----cceEEeccccccccCC--ceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-cEE-eecCcc
Confidence 899998876 3322222110 01 01333333 33 46665422111126779998875311 111 11 11
Q ss_pred CCCceEEEee-CCeEEEEeCCCCcEEEEECCCCceEEccccccccc-ceeEEEE-CC-EEEEEeeCCceEEEEEcCCCC
Q 016368 289 WNGPAASTMN-EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKG-AEKITAA-RG-RVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 289 ~~~~~~~~~~-~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~-~~~~~~~-~g-~l~i~g~~~~~v~~~d~~~~~ 363 (390)
.....++... ++.+++.++.++.+..||..+.+ .+..+..... ...+... ++ .+++.++.+..|.+||+.+..
T Consensus 263 ~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 263 KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE--QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC--EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc--cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 1112223222 78888999889999999988754 3333332222 2233333 44 677777778899999997753
No 128
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.39 E-value=0.51 Score=42.24 Aligned_cols=174 Identities=11% Similarity=0.036 Sum_probs=93.8
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEE---ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGS---VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR 240 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~ 240 (390)
..+.+||..+++........ ..-.++.. -++.+++.|+.+. .+.+||..+.. -...-..+.
T Consensus 108 g~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~~~----~~~~~~~~~-- 171 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHD--APVKTIHWIKAPNYSCVMTGSWDK--------TLKFWDTRSSN----PMMVLQLPE-- 171 (368)
T ss_dssp SEEEEEETTTTEEEEEEECS--SCEEEEEEEECSSCEEEEEEETTS--------EEEEECSSCSS----CSEEEECSS--
T ss_pred CcEEEEEcCCCCceeecccc--CceEEEEEEeCCCCCEEEEccCCC--------cEEEEECCCCc----EEEEEecCC--
Confidence 46889999888765432211 11122332 2567777777654 78899998776 222211221
Q ss_pred ccccceEEEEECCEEEEEcccCCCCceeEEEeCCCC--CeEecCCCCCCCCCCceEEEeeCC----eEEEEeCCCCcEEE
Q 016368 241 FSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELD--KWKEMPEGMHAGWNGPAASTMNEE----ELYVVNEGKGRLSK 314 (390)
Q Consensus 241 ~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~g----~lyv~gg~~~~v~~ 314 (390)
. ..+.......+++.+ ......+||.... .+..... . ............+. ..++.++.++.+..
T Consensus 172 ~---~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 172 R---CYCADVIYPMAVVAT----AERGLIVYQLENQPSEFRRIES-P-LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp C---EEEEEEETTEEEEEE----GGGCEEEEECSSSCEEEEECCC-S-CSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred C---ceEEEecCCeeEEEe----CCCcEEEEEeccccchhhhccc-c-ccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 1 244444566555553 3345778888765 3343333 1 11111222221222 33778888899999
Q ss_pred EECCCCce-EEccccccccc------------ce-eEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 315 YDADHDWW-DEVIELAELKG------------AE-KITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 315 yd~~~~~W-~~i~~~p~~r~------------~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
||.....- ..+..+..... .. +++.. ++++++.|+.+..|.+||+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 99886532 11111111111 12 23333 5667777777788999998864
No 129
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.35 E-value=0.33 Score=49.61 Aligned_cols=211 Identities=8% Similarity=0.011 Sum_probs=114.9
Q ss_pred eEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeec-CeEEEEEeecCCCCCCCCCcEEEeCCCCceecC
Q 016368 101 EFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVR-NNLVLIAATTPHFLPALASPLAFNPQSNTWFFG 179 (390)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~ 179 (390)
.+++||+.++++..+..... .... .. ..++..+ ++.+.+|.. +.+++||+.+++|+..
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~--~l~~-----~~------v~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~ 486 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNS--QLVN-----EN------VYAILPDGEGNLWLGTL--------SALVRFNPEQRSFTTI 486 (795)
T ss_dssp EEEEEETTTCCEEEECTTTS--CCSC-----SC------EEEEEECSSSCEEEEES--------SCEEEEETTTTEEEEC
T ss_pred ceeEEeCCCCcEEEeecCCC--CcCC-----Ce------eEEEEECCCCCEEEEec--------CceeEEeCCCCeEEEc
Confidence 46778888877776543211 0000 00 1233332 344555532 4689999999999876
Q ss_pred CCC----CCCCcc-eEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc------CCCCCccccceE
Q 016368 180 PQL----SIPRRW-CAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ------LKDGRFSREAVE 247 (390)
Q Consensus 180 ~~~----~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~------~~~~~~~r~~~~ 247 (390)
... ..+... .++... ++.|++... ..+.+||+.++. + .... ++... ..+
T Consensus 487 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~----------~Gl~~~~~~~~~----~-~~~~~~~~~~l~~~~----i~~ 547 (795)
T 4a2l_A 487 EKEKDGTPVVSKQITTLFRDSHKRLWIGGE----------EGLSVFKQEGLD----I-QKASILPVSNVTKLF----TNC 547 (795)
T ss_dssp CBCTTCCBCCCCCEEEEEECTTCCEEEEES----------SCEEEEEEETTE----E-EECCCSCSCGGGGSC----EEE
T ss_pred cccccccccCCceEEEEEECCCCCEEEEeC----------CceEEEeCCCCe----E-EEecCCCCCCCCCCe----eEE
Confidence 533 111111 122222 567877542 257889998888 7 3321 11111 133
Q ss_pred EEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCC--CCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEE
Q 016368 248 AVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPE--GMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDE 324 (390)
Q Consensus 248 ~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~--~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~ 324 (390)
++. .+|.+++-. ......||+.+++++.... .++.. ...+++...+|.|++.+ .+.+.+||+++.+++.
T Consensus 548 i~~d~~g~lWigT-----~~Gl~~~d~~~~~~~~~~~~~gl~~~-~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~~~~~ 619 (795)
T 4a2l_A 548 IYEASNGIIWVGT-----REGFYCFNEKDKQIKRYNTTNGLPNN-VVYGILEDSFGRLWLST--NRGISCFNPETEKFRN 619 (795)
T ss_dssp EEECTTSCEEEEE-----SSCEEEEETTTTEEEEECGGGTCSCS-CEEEEEECTTSCEEEEE--TTEEEEEETTTTEEEE
T ss_pred EEECCCCCEEEEe-----CCCceeECCCCCcEEEeCCCCCCchh-heEEEEECCCCCEEEEc--CCceEEEcCCCCcEEE
Confidence 333 357777753 2246789999998877543 12221 11233322367888776 3678999999998887
Q ss_pred cccc---cccccc-eeEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 325 VIEL---AELKGA-EKITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 325 i~~~---p~~r~~-~~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
.... +..... .++... +|.||+-+ .+.+..+|+..
T Consensus 620 ~~~~dGl~~~~f~~~~~~~~~~G~l~~g~--~~Gl~~~~p~~ 659 (795)
T 4a2l_A 620 FTESDGLQSNQFNTASYCRTSVGQMYFGG--INGITTFRPEL 659 (795)
T ss_dssp ECGGGTCSCSCEEEEEEEECTTSCEEEEE--TTEEEEECGGG
T ss_pred cCCcCCCccccCccCceeECCCCeEEEec--CCceEEEcHHH
Confidence 6532 222111 233333 67787743 23577777654
No 130
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.34 E-value=0.59 Score=42.48 Aligned_cols=189 Identities=12% Similarity=0.066 Sum_probs=91.0
Q ss_pred ecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCC-CC--cceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEE
Q 016368 145 VRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSI-PR--RWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWD 220 (390)
Q Consensus 145 ~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~-~r--~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd 220 (390)
..++.++.++.. ..+.+||..+++-........ .. .-.+++.. +++.++.|+.+. .+.+||
T Consensus 103 s~d~~~l~~s~d-------g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg--------~v~iwd 167 (357)
T 4g56_B 103 VSEKGILVASDS-------GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF--------SVKVWD 167 (357)
T ss_dssp ETTTEEEEEETT-------SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS--------CEEEEE
T ss_pred cCCCCEEEEECC-------CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC--------eEEEEE
Confidence 344555555431 358889988775433322211 11 11222222 567777777654 688999
Q ss_pred CCCCccccccEEcccCCCCCccccceEEEEE-CC-EEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCc-eEEE-
Q 016368 221 LKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KG-NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGP-AAST- 296 (390)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~- 296 (390)
..++. -...-...... ..+++.. ++ .+++.++ ....+.+||+.+.+-..... ........ +++.
T Consensus 168 ~~~~~----~~~~~~~h~~~----v~~v~~s~~~~~~~~s~~---~dg~v~~wd~~~~~~~~~~~-~~~~~~~v~~v~~s 235 (357)
T 4g56_B 168 LSQKA----VLKSYNAHSSE----VNCVAACPGKDTIFLSCG---EDGRILLWDTRKPKPATRID-FCASDTIPTSVTWH 235 (357)
T ss_dssp TTTTE----EEEEECCCSSC----EEEEEECTTCSSCEEEEE---TTSCEEECCTTSSSCBCBCC-CTTCCSCEEEEEEC
T ss_pred CCCCc----EEEEEcCCCCC----EEEEEEccCCCceeeeec---cCCceEEEECCCCceeeeee-eccccccccchhhh
Confidence 98876 32221111111 1233332 33 3444431 22446788887765332222 11111111 2222
Q ss_pred eeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--CC-EEEEEeeCCceEEEEEcCCC
Q 016368 297 MNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RG-RVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 297 ~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g-~l~i~g~~~~~v~~~d~~~~ 362 (390)
..++.+++.|+.++.+..||..+.+ .+..+.........+.+ ++ ++.+.|+.+..|.+||+.+.
T Consensus 236 p~~~~~la~g~~d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 236 PEKDDTFACGDETGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp TTSTTEEEEEESSSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred hcccceEEEeecccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 1246788888888999999987643 22222222222233332 34 55666677778999998765
No 131
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.33 E-value=0.44 Score=41.78 Aligned_cols=178 Identities=7% Similarity=-0.040 Sum_probs=92.0
Q ss_pred CCcEEEeCCCCceecCCCCCCCC---cceEEEE-ECCEEEEE----eccCCC-----CCCCccCeEEEEECCCCcccccc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPR---RWCAMGS-VGGVVYVA----SGVGAH-----YRGDVARSMKKWDLKSDREDWKW 230 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r---~~~~~~~-~~~~lyv~----GG~~~~-----~~~~~~~~~~~yd~~t~~~~~~W 230 (390)
..+.+||+.+++.+.+....... .-..++. -+|+||+. |..... ........++.||+. +. .
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~----~ 164 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT----L 164 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC----E
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC----E
Confidence 57899999888876543221111 1112222 26889886 432110 001123478889887 55 4
Q ss_pred EEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCC-CCCe-Ee--cCCCCCCCCCCceEEEeeCCeEEEE
Q 016368 231 EKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVE-LDKW-KE--MPEGMHAGWNGPAASTMNEEELYVV 305 (390)
Q Consensus 231 ~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~-~~~W-~~--~~~~~~~~~~~~~~~~~~~g~lyv~ 305 (390)
+.+..-.. . ..+.+. -+|++++.. .....+.+||+. +++. .. +-. ..... ..+++...+|+||+.
T Consensus 165 ~~~~~~~~--~---~~gi~~s~dg~~lv~~---~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~-p~~i~~d~~G~l~v~ 234 (296)
T 3e5z_A 165 SAPIRDRV--K---PNGLAFLPSGNLLVSD---TGDNATHRYCLNARGETEYQGVHFT-VEPGK-TDGLRVDAGGLIWAS 234 (296)
T ss_dssp EEEECCCS--S---EEEEEECTTSCEEEEE---TTTTEEEEEEECSSSCEEEEEEEEC-CSSSC-CCSEEEBTTSCEEEE
T ss_pred EEeecCCC--C---CccEEECCCCCEEEEe---CCCCeEEEEEECCCCcCcCCCeEee-CCCCC-CCeEEECCCCCEEEE
Confidence 44322111 1 133333 367766542 133567788876 4555 11 111 11111 123443368999988
Q ss_pred eCCCCcEEEEECCCCceEEcccccccccceeEEEE--C-CEEEEEeeCCceEEEEEcCCCC
Q 016368 306 NEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--R-GRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 306 gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~-g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
. .+.+.+||++......+. .+.. ...++.. + +.||+- .. ..++.+++.+..
T Consensus 235 ~--~~~v~~~~~~g~~~~~~~-~~~~--~~~~~f~~~d~~~L~v~-t~-~~l~~~~~~~~~ 288 (296)
T 3e5z_A 235 A--GDGVHVLTPDGDELGRVL-TPQT--TSNLCFGGPEGRTLYMT-VS-TEFWSIETNVRG 288 (296)
T ss_dssp E--TTEEEEECTTSCEEEEEE-CSSC--CCEEEEESTTSCEEEEE-ET-TEEEEEECSCCB
T ss_pred c--CCeEEEECCCCCEEEEEE-CCCC--ceeEEEECCCCCEEEEE-cC-CeEEEEEccccc
Confidence 7 678999999855444443 2222 2233331 3 357775 33 478899987763
No 132
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.31 E-value=0.26 Score=44.89 Aligned_cols=171 Identities=10% Similarity=0.075 Sum_probs=89.7
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE----CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV----GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~ 239 (390)
..+.+||..+++-... +........+..+ ++.+++.|+.+. .+.+||..+.. ....-.....
T Consensus 176 ~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg--------~v~~wd~~~~~----~~~~~~~h~~ 241 (354)
T 2pbi_B 176 GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCDK--------KAMVWDMRSGQ----CVQAFETHES 241 (354)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETTS--------CEEEEETTTCC----EEEEECCCSS
T ss_pred CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCCC--------eEEEEECCCCc----EEEEecCCCC
Confidence 4678899887754221 1111111111222 356777777664 68899998877 4332211111
Q ss_pred CccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCc-eEEEeeCCeEEEEeCCCCcEEEEEC
Q 016368 240 RFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGP-AASTMNEEELYVVNEGKGRLSKYDA 317 (390)
Q Consensus 240 ~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~g~lyv~gg~~~~v~~yd~ 317 (390)
. ..+++.. ++..++.|+ ....+.+||+.+.+-...-. ........ .+....+|.+++.|+.++.+..||.
T Consensus 242 ~----v~~v~~~p~~~~l~s~s---~D~~v~lwd~~~~~~~~~~~-~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~ 313 (354)
T 2pbi_B 242 D----VNSVRYYPSGDAFASGS---DDATCRLYDLRADREVAIYS-KESIIFGASSVDFSLSGRLLFAGYNDYTINVWDV 313 (354)
T ss_dssp C----EEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEEC-CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred C----eEEEEEeCCCCEEEEEe---CCCeEEEEECCCCcEEEEEc-CCCcccceeEEEEeCCCCEEEEEECCCcEEEEEC
Confidence 1 1223322 556655542 23456789987764222111 11111111 2222357889999998999999998
Q ss_pred CCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEE
Q 016368 318 DHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVD 358 (390)
Q Consensus 318 ~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d 358 (390)
.+.. .+..+.........+.+ +|+.++.|+.+..|.+||
T Consensus 314 ~~~~--~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 314 LKGS--RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TTCS--EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CCCc--eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 7653 33333333333333333 677777777777777764
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.26 E-value=0.19 Score=43.50 Aligned_cols=190 Identities=8% Similarity=-0.061 Sum_probs=94.9
Q ss_pred eEEEEeCCC-CCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecC
Q 016368 101 EFFCFDPIS-STWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFG 179 (390)
Q Consensus 101 ~~~~~d~~~-~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~ 179 (390)
.++++|..+ ++...+.......... .....-++..+++++... .....++.++..+++.+.+
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~--------------~~~~spdg~~l~~~~~~~---~~~~~l~~~~~~~~~~~~~ 125 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNN--------------DHGISPDGALYAISDKVE---FGKSAIYLLPSTGGTPRLM 125 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCS--------------CCEECTTSSEEEEEECTT---TSSCEEEEEETTCCCCEEC
T ss_pred eEEEEeCCCCCCceEecccccccccc--------------ceEECCCCCEEEEEEeCC---CCcceEEEEECCCCceEEe
Confidence 578889888 7766654332101111 012222445555554221 1346788888887765555
Q ss_pred CCCCCCCcceEEEEE-CC-EEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEE
Q 016368 180 PQLSIPRRWCAMGSV-GG-VVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLC 256 (390)
Q Consensus 180 ~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~ly 256 (390)
..... ....... ++ .|++.++.+. ...++.+|..+.. ...+....... ...+. -+|+..
T Consensus 126 ~~~~~---~~~~~~spdg~~l~~~~~~~~------~~~l~~~~~~~~~----~~~~~~~~~~~-----~~~~~s~dg~~l 187 (297)
T 2ojh_A 126 TKNLP---SYWHGWSPDGKSFTYCGIRDQ------VFDIYSMDIDSGV----ETRLTHGEGRN-----DGPDYSPDGRWI 187 (297)
T ss_dssp CSSSS---EEEEEECTTSSEEEEEEEETT------EEEEEEEETTTCC----EEECCCSSSCE-----EEEEECTTSSEE
T ss_pred ecCCC---ccceEECCCCCEEEEEECCCC------ceEEEEEECCCCc----ceEcccCCCcc-----ccceECCCCCEE
Confidence 43321 2222222 44 4554554432 2356667777776 55554433211 22222 356544
Q ss_pred EEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCC-----------CcEEEEECCCCceEEc
Q 016368 257 MVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGK-----------GRLSKYDADHDWWDEV 325 (390)
Q Consensus 257 v~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~-----------~~v~~yd~~~~~W~~i 325 (390)
++++...+...++.++........+.. .. .....+....+|+.+++++.+ ..+++||.++.+...+
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITD-SA--YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCC-CS--EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred EEEecCCCCccEEEECCCCCCcEEEec-CC--cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 433221233445566766666666554 11 111122222466655555432 3699999998877666
Q ss_pred ccc
Q 016368 326 IEL 328 (390)
Q Consensus 326 ~~~ 328 (390)
..+
T Consensus 265 ~~~ 267 (297)
T 2ojh_A 265 FDL 267 (297)
T ss_dssp EEE
T ss_pred ecc
Confidence 543
No 134
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.24 E-value=0.2 Score=44.73 Aligned_cols=181 Identities=11% Similarity=0.082 Sum_probs=94.7
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcc-eEEEEE---CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRW-CAMGSV---GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~-~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~ 239 (390)
..+.+||..+++...+..+...... .+++.. ++.+++.|+.+. .+.+||..+.. |..+..+...
T Consensus 35 ~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~--------~v~iWd~~~~~----~~~~~~~~~h 102 (316)
T 3bg1_A 35 RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR--------KVIIWREENGT----WEKSHEHAGH 102 (316)
T ss_dssp TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS--------CEEEECCSSSC----CCEEEEECCC
T ss_pred CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC--------EEEEEECCCCc----ceEEEEccCC
Confidence 3578888876643322222211111 122222 256777777654 68899999887 7655433211
Q ss_pred CccccceEEEEE-C--CEEEEEcccCCCCceeEEEeCCCC-CeEecCCCCCCCCCCceEEEee-----------------
Q 016368 240 RFSREAVEAVGF-K--GNLCMVNLKGNGAKDGAIYNVELD-KWKEMPEGMHAGWNGPAASTMN----------------- 298 (390)
Q Consensus 240 ~~~r~~~~~~~~-~--g~lyv~gg~g~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~----------------- 298 (390)
... -.+++.. + +.+++.|+ ....+.+||..+. .|...............+....
T Consensus 103 ~~~--V~~v~~~p~~~g~~lasgs---~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 103 DSS--VNSVCWAPHDYGLILACGS---SDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp SSC--CCEEEECCTTTCSCEEEEC---SSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred CCc--eEEEEECCCCCCcEEEEEc---CCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCcc
Confidence 110 1233332 2 55555531 2344667887765 5754322010110111111101
Q ss_pred CCeEEEEeCCCCcEEEEECCC-CceEEcccccccccceeEEEE--C----CEEEEEeeCCceEEEEEcCC
Q 016368 299 EEELYVVNEGKGRLSKYDADH-DWWDEVIELAELKGAEKITAA--R----GRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~-~~W~~i~~~p~~r~~~~~~~~--~----g~l~i~g~~~~~v~~~d~~~ 361 (390)
.+++++.|+.++.+..||..+ ..|..+..+.........+.+ + +.+++.|+.+..|.+||+.+
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 146778888888888888864 458777666544433333333 2 25666667777899999875
No 135
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.23 E-value=0.53 Score=42.95 Aligned_cols=180 Identities=12% Similarity=0.056 Sum_probs=93.0
Q ss_pred CCcEEEeCCCCc------eecCCCCCCC---CcceEEEEE-----CCEE-EEEeccCCCCCCCccCeEEEEECCC-----
Q 016368 164 ASPLAFNPQSNT------WFFGPQLSIP---RRWCAMGSV-----GGVV-YVASGVGAHYRGDVARSMKKWDLKS----- 223 (390)
Q Consensus 164 ~~~~~~dp~t~~------W~~~~~~~~~---r~~~~~~~~-----~~~l-yv~GG~~~~~~~~~~~~~~~yd~~t----- 223 (390)
..+.+||..+++ +..+...... ..-.+++.. ++.. ++.|+.+. .+.+||..+
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg--------~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG--------TTYIWKFHPFADES 162 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS--------CEEEEEEESSSSHH
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC--------cEEEEeCCcccccc
Confidence 468888987776 5555443211 122233333 4555 66666554 678888877
Q ss_pred -CccccccEEcccC---------CCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCC-CC---C
Q 016368 224 -DREDWKWEKKAQL---------KDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGM-HA---G 288 (390)
Q Consensus 224 -~~~~~~W~~~~~~---------~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~-~~---~ 288 (390)
... ..|.....+ .... ..+++.. ++ +++.|+ ....+.+||..+.+-...-... .. .
T Consensus 163 ~~~~-~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~-~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 163 NSLT-LNWSPTLELQGTVESPMTPSQF----ATSVDISERG-LIATGF---NNGTVQISELSTLRPLYNFESQHSMINNS 233 (397)
T ss_dssp HHTT-TCCCCEEEEEEEECCSSSSCCC----CCEEEECTTS-EEEEEC---TTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred ccce-eeccCcceeeeeeccccCCCCC----ceEEEECCCc-eEEEEe---CCCcEEEEECCCCceeEEEeccccccccC
Confidence 330 012111111 1111 1333333 45 555531 2345778998876432211100 01 1
Q ss_pred CCCceEEEeeCCeEEEEeCCC---CcEEEEECCCCceEEcccccc-------------cccce-eEEEE-CCEEEEEeeC
Q 016368 289 WNGPAASTMNEEELYVVNEGK---GRLSKYDADHDWWDEVIELAE-------------LKGAE-KITAA-RGRVCAVCEN 350 (390)
Q Consensus 289 ~~~~~~~~~~~g~lyv~gg~~---~~v~~yd~~~~~W~~i~~~p~-------------~r~~~-~~~~~-~g~l~i~g~~ 350 (390)
.....++...++.+++.++.+ +.+..||..+.+- +..+.. ..... .+... ++++++.|+.
T Consensus 234 ~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 234 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER--IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE--EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred CccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc--cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 112233322478888888877 8999999886542 222222 22222 23333 5777777777
Q ss_pred CceEEEEEcCCC
Q 016368 351 GERIMVVDVLAS 362 (390)
Q Consensus 351 ~~~v~~~d~~~~ 362 (390)
++.+.+||+.+.
T Consensus 312 dg~i~iwd~~~~ 323 (397)
T 1sq9_A 312 DGKLRFWDVKTK 323 (397)
T ss_dssp TSEEEEEETTTT
T ss_pred CCeEEEEEcCCC
Confidence 889999999765
No 136
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.19 E-value=0.24 Score=44.18 Aligned_cols=204 Identities=10% Similarity=0.154 Sum_probs=97.7
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcc-eEEEEE-C--CEEEEEeccCCCCCCCccCeEEEEECC
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRW-CAMGSV-G--GVVYVASGVGAHYRGDVARSMKKWDLK 222 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~-~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~~yd~~ 222 (390)
+.+++.++.. ..+.+||..+++|..+..+...... .+++.. + +.+++.|+.+. .+.+||..
T Consensus 71 ~~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYD-------RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYT 135 (316)
T ss_dssp SSCEEEEETT-------SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEEC
T ss_pred CCEEEEEECC-------CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecC
Confidence 4555555432 4688899988776543322211111 122222 2 55666666654 67788887
Q ss_pred CC-ccccccEEcccCCCCCccccceEEEEE------------------CCEEEEEcccCCCCceeEEEeCCC-CCeEecC
Q 016368 223 SD-REDWKWEKKAQLKDGRFSREAVEAVGF------------------KGNLCMVNLKGNGAKDGAIYNVEL-DKWKEMP 282 (390)
Q Consensus 223 t~-~~~~~W~~~~~~~~~~~~r~~~~~~~~------------------~g~lyv~gg~g~~~~~~~~yd~~~-~~W~~~~ 282 (390)
+. . |.....+...... ..+++.. .+++++.|+ ....+.++|..+ +.|..+.
T Consensus 136 ~~~~----~~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs---~D~~v~lWd~~~~~~~~~~~ 206 (316)
T 3bg1_A 136 GEGQ----WEVKKINNAHTIG--CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGG---CDNLIKLWKEEEDGQWKEEQ 206 (316)
T ss_dssp SSSC----EEECCBTTSSSSC--BCCCEECCCCCC------CCSCCCCCCCBEECCB---TTSBCCEEEECTTSCEEEEE
T ss_pred CCCC----cceeeeeccccCC--cceEEEccccCCccccccccccCccccceEEEec---CCCeEEEEEeCCCCccceee
Confidence 65 4 6543322111000 0111110 123444431 123456788763 4576654
Q ss_pred CCCCCCCCCc--eEEEeeC----CeEEEEeCCCCcEEEEECCC---CceEEccccccccc-ceeEEEE-CCEEEEEeeCC
Q 016368 283 EGMHAGWNGP--AASTMNE----EELYVVNEGKGRLSKYDADH---DWWDEVIELAELKG-AEKITAA-RGRVCAVCENG 351 (390)
Q Consensus 283 ~~~~~~~~~~--~~~~~~~----g~lyv~gg~~~~v~~yd~~~---~~W~~i~~~p~~r~-~~~~~~~-~g~l~i~g~~~ 351 (390)
. +. +.... .++...+ +.+++.++.++.+..||..+ ..|.... +..... ...++.. ++.+++.++.+
T Consensus 207 ~-l~-~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~-~~~~~~~v~~v~~sp~g~~las~~~D 283 (316)
T 3bg1_A 207 K-LE-AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKL-LHKFNDVVWHVSWSITANILAVSGGD 283 (316)
T ss_dssp C-CB-CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCE-EEECSSCEEEEEECTTTCCEEEEESS
T ss_pred e-cc-cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhh-hhcCCCcEEEEEEcCCCCEEEEEcCC
Confidence 4 22 12222 2221123 37788888899999999875 3343211 111111 2233333 57777777777
Q ss_pred ceEEEEEcCCCCCcceE-e---cCCCCeeEEE
Q 016368 352 ERIMVVDVLASPARAWL-V---DPPRGFQVVA 379 (390)
Q Consensus 352 ~~v~~~d~~~~~~~~W~-~---~~p~g~~~~~ 379 (390)
..|.+||.... ..|. + ..++|+.+-+
T Consensus 284 ~~v~lw~~~~~--g~~~~~~~~~~~~~~~~~~ 313 (316)
T 3bg1_A 284 NKVTLWKESVD--GQWVCISDVNKGQGSVSAS 313 (316)
T ss_dssp SCEEEEEECTT--SCEEEEEECC---------
T ss_pred CeEEEEEECCC--CcEEEeeeccCCCCceeee
Confidence 88999998643 2676 2 2345554433
No 137
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.17 E-value=0.84 Score=42.59 Aligned_cols=176 Identities=13% Similarity=0.062 Sum_probs=95.6
Q ss_pred CcEEEeCCCCce-ecCCCCC--CCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccC---
Q 016368 165 SPLAFNPQSNTW-FFGPQLS--IPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQL--- 236 (390)
Q Consensus 165 ~~~~~dp~t~~W-~~~~~~~--~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~--- 236 (390)
.++++++.++.- ..+.... ....-+++++. ++.||+.-. ...+.+||+.+.. -..+...
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---------~~~I~~~d~~~~~----~~~~~~~~~~ 261 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---------NKNFGRFNVKTQE----VTLIKQLELS 261 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------TCEEEEEETTTCC----EEEEEECCCC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------CCcEEEEECCCCC----EEEEeccccc
Confidence 788899875532 2231111 11111233333 688999321 2378999998876 5544211
Q ss_pred CCCCccccc-e-EEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCC----CCC-----C-CCCc-eEEEeeCCe
Q 016368 237 KDGRFSREA-V-EAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEG----MHA-----G-WNGP-AASTMNEEE 301 (390)
Q Consensus 237 ~~~~~~r~~-~-~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~----~~~-----~-~~~~-~~~~~~~g~ 301 (390)
..... . . .+++. ++.+|+.. .....+.+||.....-...... ... . ...+ ++++..+|.
T Consensus 262 g~~~~---~P~~~ia~~p~~g~lyv~d---~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 262 GSLGT---NPGPYLIYYFVDSNFYMSD---QNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp SCCCC---SSCCEEEEETTTTEEEEEE---TTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred CCCCC---CccccEEEeCCCCEEEEEe---CCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 11111 1 2 45554 58999982 2345677888765421111110 000 0 1112 344334688
Q ss_pred EEEEeC-CCCcEEEEECCCCceEEccccc-------------ccccceeEEEE-CCEEEEEeeCCceEEEEEc
Q 016368 302 LYVVNE-GKGRLSKYDADHDWWDEVIELA-------------ELKGAEKITAA-RGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 302 lyv~gg-~~~~v~~yd~~~~~W~~i~~~p-------------~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~ 359 (390)
||+... .++.|.+||+.+..-..+...+ ......++++. +|.|||.-..++.|..+++
T Consensus 336 lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999998 7889999996666555443221 01234556665 5889998666677777764
No 138
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.17 E-value=0.35 Score=42.76 Aligned_cols=177 Identities=5% Similarity=-0.083 Sum_probs=86.3
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccE-EcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWE-KKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~-~~~~~~~~~~ 241 (390)
..+.+||..+++-...-....... .++... ++++++.|+.+. .+.+||..++. -. .+.. ... .
T Consensus 35 g~v~lWd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~s~s~d~--------~i~vwd~~~~~----~~~~~~~-h~~-~ 99 (304)
T 2ynn_A 35 GRVELWNYETQVEVRSIQVTETPV-RAGKFIARKNWIIVGSDDF--------RIRVFNYNTGE----KVVDFEA-HPD-Y 99 (304)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCE-EEEEEEGGGTEEEEEETTS--------EEEEEETTTCC----EEEEEEC-CSS-C
T ss_pred CcEEEEECCCCceeEEeeccCCcE-EEEEEeCCCCEEEEECCCC--------EEEEEECCCCc----EEEEEeC-CCC-c
Confidence 468889988765322111111111 122222 556666666654 78899998876 21 1111 111 1
Q ss_pred cccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEee-CCeEEEEeCCCCcEEEEECCC
Q 016368 242 SREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMN-EEELYVVNEGKGRLSKYDADH 319 (390)
Q Consensus 242 ~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~g~lyv~gg~~~~v~~yd~~~ 319 (390)
-.+++.. ++++.+.|+ ....+.+||..++. ..............+++... ++.+++.|+.++.+..||..+
T Consensus 100 ---v~~~~~~~~~~~l~sgs---~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 100 ---IRSIAVHPTKPYVLSGS---DDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp ---EEEEEECSSSSEEEEEE---TTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred ---EEEEEEcCCCCEEEEEC---CCCeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 1233332 455555531 23456788876542 11111001111112222211 567888999999999999865
Q ss_pred CceEEcccccccccceeEEEE---CCEEEEEeeCCceEEEEEcCCC
Q 016368 320 DWWDEVIELAELKGAEKITAA---RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 320 ~~W~~i~~~p~~r~~~~~~~~---~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
..=..............+... ++.+++.|+.+..|.+||+.+.
T Consensus 173 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 173 STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp SSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred CCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 431111100111111112221 4556667677778999998764
No 139
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.16 E-value=0.16 Score=45.51 Aligned_cols=180 Identities=10% Similarity=-0.032 Sum_probs=96.8
Q ss_pred CcEEEeCCCCceecCCCCCCC---CcceEEEEE--CCEEEEEeccCCCC---------CCCccCeEEEEECCCCcccccc
Q 016368 165 SPLAFNPQSNTWFFGPQLSIP---RRWCAMGSV--GGVVYVASGVGAHY---------RGDVARSMKKWDLKSDREDWKW 230 (390)
Q Consensus 165 ~~~~~dp~t~~W~~~~~~~~~---r~~~~~~~~--~~~lyv~GG~~~~~---------~~~~~~~~~~yd~~t~~~~~~W 230 (390)
.+.++|+.+++.+.+...... ..-..+++. +|.||+.-...... .......+++||+.+.. .
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~----~ 177 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE----T 177 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE----E
T ss_pred CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE----E
Confidence 488899887765544321111 111223333 57899874321000 00123468999998877 5
Q ss_pred EEccc-CCCCCccccceEEEEE-CC-EEEEEcccCCCCceeEEEeCCCC---CeEecCCCCCCCCCCceEEEeeCCeEEE
Q 016368 231 EKKAQ-LKDGRFSREAVEAVGF-KG-NLCMVNLKGNGAKDGAIYNVELD---KWKEMPEGMHAGWNGPAASTMNEEELYV 304 (390)
Q Consensus 231 ~~~~~-~~~~~~~r~~~~~~~~-~g-~lyv~gg~g~~~~~~~~yd~~~~---~W~~~~~~~~~~~~~~~~~~~~~g~lyv 304 (390)
+.+.. +.. ...++.. +| .+|+.- .....+.+||+... +.+.... .+ + ...+++..+|.||+
T Consensus 178 ~~~~~~~~~------p~gia~~~dg~~lyv~d---~~~~~I~~~~~~~~~~~~~~~~~~-~~-g--P~gi~~d~~G~l~v 244 (322)
T 2fp8_A 178 TLLLKELHV------PGGAEVSADSSFVLVAE---FLSHQIVKYWLEGPKKGTAEVLVK-IP-N--PGNIKRNADGHFWV 244 (322)
T ss_dssp EEEEEEESC------CCEEEECTTSSEEEEEE---GGGTEEEEEESSSTTTTCEEEEEE-CS-S--EEEEEECTTSCEEE
T ss_pred EEeccCCcc------CcceEECCCCCEEEEEe---CCCCeEEEEECCCCcCCccceEEe-CC-C--CCCeEECCCCCEEE
Confidence 54322 111 1334433 44 488872 12356788998753 3333222 21 1 12344334688998
Q ss_pred EeCC----------CCcEEEEECCCCceEEcccccc---cccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 305 VNEG----------KGRLSKYDADHDWWDEVIELAE---LKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 305 ~gg~----------~~~v~~yd~~~~~W~~i~~~p~---~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.... .+.+.+||+....-..+. .+. .....+++..+|+|||.+..++.|.++++..+
T Consensus 245 a~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~-~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 245 SSSEELDGNMHGRVDPKGIKFDEFGNILEVIP-LPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EEEEETTSSTTSCEEEEEEEECTTSCEEEEEE-CCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC---
T ss_pred EecCcccccccCCCccEEEEECCCCCEEEEEE-CCCCCccccceEEEEeCCEEEEeecCCCceEEEecccc
Confidence 7643 357999999754444443 221 12334455568999998767788999998654
No 140
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.16 E-value=0.15 Score=44.87 Aligned_cols=153 Identities=9% Similarity=0.015 Sum_probs=86.0
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVE 274 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~ 274 (390)
.+++++.|..+ ..+.++|.++++. .|+.-..-... . ....+.-+|++++. ....+..||++
T Consensus 4 ~~~~lv~~~~~--------~~v~~~d~~tG~~--~w~~~~~~~~~-~---~~~~~~pdG~ilvs-----~~~~V~~~d~~ 64 (276)
T 3no2_A 4 PQHLLVGGSGW--------NKIAIINKDTKEI--VWEYPLEKGWE-C---NSVAATKAGEILFS-----YSKGAKMITRD 64 (276)
T ss_dssp CCEEEEECTTC--------SEEEEEETTTTEE--EEEEECCTTCC-C---CEEEECTTSCEEEE-----CBSEEEEECTT
T ss_pred CCcEEEeeCCC--------CEEEEEECCCCeE--EEEeCCCccCC-C---cCeEECCCCCEEEe-----CCCCEEEECCC
Confidence 46777776554 3788999988773 37654322111 1 13334458888885 45668899984
Q ss_pred CC-CeEecCCCCCCCCCCceEEEeeCCeEEEEeCC-CCcEEEEECCCCc-eEEcc--ccccc-cccee-EEEECCEEEEE
Q 016368 275 LD-KWKEMPEGMHAGWNGPAASTMNEEELYVVNEG-KGRLSKYDADHDW-WDEVI--ELAEL-KGAEK-ITAARGRVCAV 347 (390)
Q Consensus 275 ~~-~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~-~~~v~~yd~~~~~-W~~i~--~~p~~-r~~~~-~~~~~g~l~i~ 347 (390)
.+ .|+.-.. ......++....+|++++.... .+.++.+|++... |+.-. ..+.. ..... ....+|.+++.
T Consensus 65 G~~~W~~~~~---~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~ 141 (276)
T 3no2_A 65 GRELWNIAAP---AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP 141 (276)
T ss_dssp SCEEEEEECC---TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE
T ss_pred CCEEEEEcCC---CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEE
Confidence 32 5765432 1111122333368888887765 6688999986542 43221 11111 11112 23336677766
Q ss_pred eeCCceEEEEEcCCCCCcceEecC
Q 016368 348 CENGERIMVVDVLASPARAWLVDP 371 (390)
Q Consensus 348 g~~~~~v~~~d~~~~~~~~W~~~~ 371 (390)
...+..|.++|...+ ..|+...
T Consensus 142 ~~~~~~v~~~d~~G~--~~w~~~~ 163 (276)
T 3no2_A 142 LFATSEVREIAPNGQ--LLNSVKL 163 (276)
T ss_dssp ETTTTEEEEECTTSC--EEEEEEC
T ss_pred ecCCCEEEEECCCCC--EEEEEEC
Confidence 566678889988733 4677543
No 141
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.15 E-value=0.2 Score=45.89 Aligned_cols=186 Identities=9% Similarity=0.034 Sum_probs=95.1
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCC-----------CCCCcc-eEEEEE--CCEEEEEeccCCCCCCCc
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQL-----------SIPRRW-CAMGSV--GGVVYVASGVGAHYRGDV 212 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~-----------~~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~ 212 (390)
+.+++.|+. -..+.+||..+.+....... ...... .+++.. ++.+++.|+.+.
T Consensus 56 ~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~------ 122 (408)
T 4a11_B 56 GRYMLSGGS-------DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK------ 122 (408)
T ss_dssp CCEEEEEET-------TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS------
T ss_pred CCEEEEEcC-------CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC------
Confidence 455555543 24688899887654332110 001111 222222 445666766554
Q ss_pred cCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE----CCEEEEEcccCCCCceeEEEeCCCCCeEe-cCCCCCC
Q 016368 213 ARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF----KGNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGMHA 287 (390)
Q Consensus 213 ~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~----~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~~~ 287 (390)
.+.+||..+.. -.......... ...... ++.+.+.|+ ....+.+||+.+.+-.. +.. .
T Consensus 123 --~i~iwd~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~v~~~d~~~~~~~~~~~~---~ 185 (408)
T 4a11_B 123 --TLKVWDTNTLQ----TADVFNFEETV-----YSHHMSPVSTKHCLVAVGT---RGPKVQLCDLKSGSCSHILQG---H 185 (408)
T ss_dssp --EEEEEETTTTE----EEEEEECSSCE-----EEEEECSSCSSCCEEEEEE---SSSSEEEEESSSSCCCEEECC---C
T ss_pred --eEEEeeCCCCc----cceeccCCCce-----eeeEeecCCCCCcEEEEEc---CCCeEEEEeCCCcceeeeecC---C
Confidence 78899998876 33333222211 222221 334555532 23457789987654221 111 1
Q ss_pred CCCCceEEEeeCCe-EEEEeCCCCcEEEEECCCCc--eEEccc------------ccccccce-eEEEE-CCEEEEEeeC
Q 016368 288 GWNGPAASTMNEEE-LYVVNEGKGRLSKYDADHDW--WDEVIE------------LAELKGAE-KITAA-RGRVCAVCEN 350 (390)
Q Consensus 288 ~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd~~~~~--W~~i~~------------~p~~r~~~-~~~~~-~g~l~i~g~~ 350 (390)
.....+++...++. +++.|+.++.+..||..+.. ...+.. ........ .+... +++.++.++.
T Consensus 186 ~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 186 RQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp CSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 11112233223444 78888889999999987643 222210 01112222 23333 6667777777
Q ss_pred CceEEEEEcCCC
Q 016368 351 GERIMVVDVLAS 362 (390)
Q Consensus 351 ~~~v~~~d~~~~ 362 (390)
++.+.+||+.+.
T Consensus 266 dg~i~vwd~~~~ 277 (408)
T 4a11_B 266 DNRMRLWNSSNG 277 (408)
T ss_dssp TSCEEEEETTTC
T ss_pred CCeEEEEECCCC
Confidence 789999998764
No 142
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.14 E-value=0.34 Score=44.28 Aligned_cols=199 Identities=8% Similarity=0.002 Sum_probs=99.2
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCc----eecCCCCCCCC-cceEEEEE-C----C---EEEEEeccCCC
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNT----WFFGPQLSIPR-RWCAMGSV-G----G---VVYVASGVGAH 207 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~----W~~~~~~~~~r-~~~~~~~~-~----~---~lyv~GG~~~~ 207 (390)
.+++....+++.++.. ..+.+||..+.+ +..+..+.... .-.++... + + ++++.|+.+.
T Consensus 20 ~~~~~~~~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg- 91 (397)
T 1sq9_A 20 FSVSACNSFTVSCSGD-------GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG- 91 (397)
T ss_dssp EEEEECSSEEEEEETT-------SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS-
T ss_pred EEEEecCCeEEEEcCC-------CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCC-
Confidence 5566666666666532 468889988776 22222221111 11222222 4 6 7777777654
Q ss_pred CCCCccCeEEEEECCCCccc--cccEEcccCC----CCCccccceEEEEE-----CCEE-EEEcccCCCCceeEEEeCCC
Q 016368 208 YRGDVARSMKKWDLKSDRED--WKWEKKAQLK----DGRFSREAVEAVGF-----KGNL-CMVNLKGNGAKDGAIYNVEL 275 (390)
Q Consensus 208 ~~~~~~~~~~~yd~~t~~~~--~~W~~~~~~~----~~~~~r~~~~~~~~-----~g~l-yv~gg~g~~~~~~~~yd~~~ 275 (390)
.+.+||..+.... ..+..+.... ... ..+++.. ++.. ++.|+ ....+.+||..+
T Consensus 92 -------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~ 157 (397)
T 1sq9_A 92 -------DLLFYRITREDETKKVIFEKLDLLDSDMKKHS----FWALKWGASNDRLLSHRLVATD---VKGTTYIWKFHP 157 (397)
T ss_dssp -------CEEEEEEEECTTTCCEEEEEECCSCTTGGGSC----EEEEEEECCC----CEEEEEEE---TTSCEEEEEEES
T ss_pred -------CEEEEEccCCcccccccceeecccccccCCCc----EEEEEEeeccCCCCceEEEEEe---CCCcEEEEeCCc
Confidence 6788888766500 0022222221 111 1333333 4555 55532 224466787766
Q ss_pred ------CC---eEecCCC-------CCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccc-ccc---ccce
Q 016368 276 ------DK---WKEMPEG-------MHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIEL-AEL---KGAE 335 (390)
Q Consensus 276 ------~~---W~~~~~~-------~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~-p~~---r~~~ 335 (390)
.+ |...... ........++....++ +++.++.++.+..||..+.+-...-.. ... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 158 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE
T ss_pred cccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc
Confidence 21 1110010 0011122333332456 888888889999999987643322211 001 2222
Q ss_pred e-EEEE-CCEEEEEeeCC---ceEEEEEcCCC
Q 016368 336 K-ITAA-RGRVCAVCENG---ERIMVVDVLAS 362 (390)
Q Consensus 336 ~-~~~~-~g~l~i~g~~~---~~v~~~d~~~~ 362 (390)
. +... ++++++.++.+ ..+.+||+.+.
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 2 3332 56777776666 78999998765
No 143
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.2 Score=45.04 Aligned_cols=179 Identities=10% Similarity=-0.003 Sum_probs=89.2
Q ss_pred CCcEEEeCCC--CceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC
Q 016368 164 ASPLAFNPQS--NTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t--~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~ 239 (390)
..+.+||... ..++.+..+.........+.. ++.+++.|+.+. .+.+||..++. |+.+..+...
T Consensus 129 ~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~--------~i~iW~~~~~~----~~~~~~~~~h 196 (330)
T 2hes_X 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD--------TVRIWKDYDDD----WECVAVLNGH 196 (330)
T ss_dssp SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS--------CEEEEEEETTE----EEEEEEECCC
T ss_pred CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC--------eEEEEECCCCC----eeEEEEccCC
Confidence 3678888743 233332222211111222222 566777777654 67788887776 7665544321
Q ss_pred CccccceEEEEEC---CEEEEEcccCCCCceeEEEeCCC------CCeEecCCCCCC--CCCCceEEEeeCCeEEEEeCC
Q 016368 240 RFSREAVEAVGFK---GNLCMVNLKGNGAKDGAIYNVEL------DKWKEMPEGMHA--GWNGPAASTMNEEELYVVNEG 308 (390)
Q Consensus 240 ~~~r~~~~~~~~~---g~lyv~gg~g~~~~~~~~yd~~~------~~W~~~~~~~~~--~~~~~~~~~~~~g~lyv~gg~ 308 (390)
... -.++.... +...+.|+ ....+.+||..+ ..|..... .+. ......++. ..+.+++.++.
T Consensus 197 ~~~--v~~~~~~~~~~~~~l~s~s---~D~~v~iw~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~-s~~~~l~s~~~ 269 (330)
T 2hes_X 197 EGT--VWSSDFDKTEGVFRLCSGS---DDSTVRVWKYMGDDEDDQQEWVCEAI-LPDVHKRQVYNVAW-GFNGLIASVGA 269 (330)
T ss_dssp SSC--EEEEEECCSSSSCEEEEEE---TTSCEEEEEEEEECTTSCEEEEEEEE-CCSCCSSCEEEEEE-CTTSCEEEEET
T ss_pred CCc--EEEEEecCCCCeeEEEEEe---CCCeEEEEEecCCCccccceeEEeee-cccccccceEEEEE-cCCCEEEEEeC
Confidence 110 12222222 33333331 223355666543 23544332 221 111223332 34556777888
Q ss_pred CCcEEEEECCCCceEEcccccc-ccc-ceeEEEE----CCEEEEEeeCCceEEEEEcCC
Q 016368 309 KGRLSKYDADHDWWDEVIELAE-LKG-AEKITAA----RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 309 ~~~v~~yd~~~~~W~~i~~~p~-~r~-~~~~~~~----~g~l~i~g~~~~~v~~~d~~~ 361 (390)
++.+..||..+..|..+..... ... ....+.+ ++.+++.|+.+..|.+||+.+
T Consensus 270 dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 270 DGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred CCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 8999999998888876543321 221 2222222 466777777788999999764
No 144
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.09 E-value=0.44 Score=48.66 Aligned_cols=175 Identities=8% Similarity=0.006 Sum_probs=96.1
Q ss_pred CCcEEEeCCCCceecCCCCC--CCC-cceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC--
Q 016368 164 ASPLAFNPQSNTWFFGPQLS--IPR-RWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK-- 237 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~--~~r-~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~-- 237 (390)
..+.+||+.+++++...... .+. .-.++... ++.|++... ..+.+||+.++. |+......
T Consensus 427 ~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~----~~~~~~~~~~ 492 (795)
T 4a2l_A 427 GGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL----------SALVRFNPEQRS----FTTIEKEKDG 492 (795)
T ss_dssp TEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES----------SCEEEEETTTTE----EEECCBCTTC
T ss_pred CceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec----------CceeEEeCCCCe----EEEccccccc
Confidence 46889999998887654311 111 11222222 567777532 357899999998 88765331
Q ss_pred CCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCC--CC-CC-CCCceEEEeeCCeEEEEeCCCCcE
Q 016368 238 DGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEG--MH-AG-WNGPAASTMNEEELYVVNEGKGRL 312 (390)
Q Consensus 238 ~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~--~~-~~-~~~~~~~~~~~g~lyv~gg~~~~v 312 (390)
.........+.+. -+|.+++-. .....+||+.++++ ..... .. .+ ....+++...+|.|++-.. +.+
T Consensus 493 ~~~~~~~i~~i~~d~~g~lWigt-----~~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~--~Gl 564 (795)
T 4a2l_A 493 TPVVSKQITTLFRDSHKRLWIGG-----EEGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR--EGF 564 (795)
T ss_dssp CBCCCCCEEEEEECTTCCEEEEE-----SSCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES--SCE
T ss_pred cccCCceEEEEEECCCCCEEEEe-----CCceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC--CCc
Confidence 1100000122332 356777753 23467899988887 43210 00 11 1112223224678876543 378
Q ss_pred EEEECCCCceEEccccccccc--ceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 313 SKYDADHDWWDEVIELAELKG--AEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 313 ~~yd~~~~~W~~i~~~p~~r~--~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+||++++++........... ..+++.- +|.|++-+ .+.+..+|+.+.
T Consensus 565 ~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~ 615 (795)
T 4a2l_A 565 YCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPETE 615 (795)
T ss_dssp EEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTT
T ss_pred eeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcCCCC
Confidence 999999998887653221111 2233333 67888864 356778887765
No 145
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.07 E-value=0.13 Score=52.45 Aligned_cols=177 Identities=5% Similarity=-0.071 Sum_probs=91.6
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFS 242 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~ 242 (390)
..+.+||..+++....-...... -.+++.. +++.+++|+.+. .+.+||..++. ....-......
T Consensus 35 g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~~----~~~~~~~~~~~-- 99 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGE----KVVDFEAHPDY-- 99 (814)
T ss_dssp SEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETTS--------EEEEEETTTCC----EEEEEECCSSC--
T ss_pred CEEEEEECCCCceEEEEecCCCc-EEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCc----EEEEEecCCCC--
Confidence 46889998877543211111111 1122222 566666666543 78999998877 43222111111
Q ss_pred ccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCC-CeEecCCCCCCCCCCceEEEee-CCeEEEEeCCCCcEEEEECCC
Q 016368 243 REAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELD-KWKEMPEGMHAGWNGPAASTMN-EEELYVVNEGKGRLSKYDADH 319 (390)
Q Consensus 243 r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~-~g~lyv~gg~~~~v~~yd~~~ 319 (390)
..+++. -+++..+.|+ ....+.+||..++ .....-. .......+++... ++.+++.++.++.+..||..+
T Consensus 100 --v~~~~~s~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 100 --IRSIAVHPTKPYVLSGS---DDLTVKLWNWENNWALEQTFE--GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp --EEEEEECSSSSEEEEEE---TTSEEEEEEGGGTSEEEEEEE--CCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred --EEEEEEeCCCCEEEEEc---CCCEEEEEECCCCceEEEEEc--CCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 122332 2555444431 2345778988765 2222111 1111112223213 678888898899999999876
Q ss_pred CceEEcccccccccceeEEEE---CCEEEEEeeCCceEEEEEcCCC
Q 016368 320 DWWDEVIELAELKGAEKITAA---RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 320 ~~W~~i~~~p~~r~~~~~~~~---~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
..-..............+... ++..++.|+.+..+.+||+.+.
T Consensus 173 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 173 STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 543222111111222222222 6677777777778999998764
No 146
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.06 E-value=0.45 Score=42.25 Aligned_cols=166 Identities=8% Similarity=0.032 Sum_probs=91.6
Q ss_pred eecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECC
Q 016368 176 WFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKG 253 (390)
Q Consensus 176 W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g 253 (390)
.+.+..++.+..-.+.++. +++||+.-.. ...+.+||+.+.. ......+. . .+++++ -+|
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~lyv~d~~--------~~~I~~~d~~g~~-----~~~~~~~~--~---p~gia~~~dG 83 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGTIFVTNHE--------VGEIVSITPDGNQ-----QIHATVEG--K---VSGLAFTSNG 83 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCEEEEETT--------TTEEEEECTTCCE-----EEEEECSS--E---EEEEEECTTS
T ss_pred ceEeEeCCCCCCcceEEECCCCCEEEEeCC--------CCeEEEECCCCce-----EEEEeCCC--C---ceeEEEcCCC
Confidence 3333333333333344442 6778887432 2478899987653 22222221 1 144443 367
Q ss_pred EEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc---eEEcccc--
Q 016368 254 NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW---WDEVIEL-- 328 (390)
Q Consensus 254 ~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~---W~~i~~~-- 328 (390)
++|+.... .....+..||+.+++.+.+.. .+..+.....+...++.+|+.....+.++++|+.+.. |..-..+
T Consensus 84 ~l~vad~~-~~~~~v~~~d~~~g~~~~~~~-~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~ 161 (306)
T 2p4o_A 84 DLVATGWN-ADSIPVVSLVKSDGTVETLLT-LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR 161 (306)
T ss_dssp CEEEEEEC-TTSCEEEEEECTTSCEEEEEE-CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC
T ss_pred cEEEEecc-CCcceEEEEcCCCCeEEEEEe-CCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc
Confidence 89887311 112346788988888776544 2233332333332466788877667799999987642 2211111
Q ss_pred ----cccccceeEEEECCEEEEEeeCCceEEEEEcCC
Q 016368 329 ----AELKGAEKITAARGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 329 ----p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~ 361 (390)
.......++..-++.||+.-...+.|+++|+..
T Consensus 162 ~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 162 SNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp SSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCT
T ss_pred ccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCC
Confidence 111223345334668999866677999999874
No 147
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.06 E-value=0.15 Score=45.20 Aligned_cols=170 Identities=8% Similarity=-0.009 Sum_probs=85.7
Q ss_pred CCcEEEeCCCCceecCCCCCC--CCcceEEEEE--CCEEEEEeccCCCC---CCCccCeEEEEECCCCccccccEEccc-
Q 016368 164 ASPLAFNPQSNTWFFGPQLSI--PRRWCAMGSV--GGVVYVASGVGAHY---RGDVARSMKKWDLKSDREDWKWEKKAQ- 235 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~--~r~~~~~~~~--~~~lyv~GG~~~~~---~~~~~~~~~~yd~~t~~~~~~W~~~~~- 235 (390)
+.+++||+.+++++.+..... +........+ +|++|+..-..... .......++.+|+.. . ...+..
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~----~~~~~~~ 147 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-H----VKKYFDQ 147 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-C----EEEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-C----EEEEeec
Confidence 478999999998876543321 2222222333 67888743221100 011234677888753 3 333221
Q ss_pred CCCCCccccceEEEEE-CC-EEEEEcccCCCCceeEEEeC--CCCCeEec---CCCCCC-CCCCceEEEeeCCeEEEEeC
Q 016368 236 LKDGRFSREAVEAVGF-KG-NLCMVNLKGNGAKDGAIYNV--ELDKWKEM---PEGMHA-GWNGPAASTMNEEELYVVNE 307 (390)
Q Consensus 236 ~~~~~~~r~~~~~~~~-~g-~lyv~gg~g~~~~~~~~yd~--~~~~W~~~---~~~~~~-~~~~~~~~~~~~g~lyv~gg 307 (390)
+.. ..+.+.. ++ .+|+.. .....+.+||. ++.+.... .. .+. ...-..+++..+|.||+...
T Consensus 148 ~~~------pngi~~spdg~~lyv~~---~~~~~i~~~~~d~~~G~~~~~~~~~~-~~~~~~~p~g~~~d~~G~lwva~~ 217 (297)
T 3g4e_A 148 VDI------SNGLDWSLDHKIFYYID---SLSYSVDAFDYDLQTGQISNRRSVYK-LEKEEQIPDGMCIDAEGKLWVACY 217 (297)
T ss_dssp ESB------EEEEEECTTSCEEEEEE---GGGTEEEEEEECTTTCCEEEEEEEEE-CCGGGCEEEEEEEBTTSCEEEEEE
T ss_pred ccc------ccceEEcCCCCEEEEec---CCCCcEEEEeccCCCCcccCcEEEEE-CCCCCCCCCeeEECCCCCEEEEEc
Confidence 111 1333332 44 588873 12345677775 45544211 11 111 01112344335789998876
Q ss_pred CCCcEEEEECCCCceEEcccccccccceeEEEE---CCEEEEEee
Q 016368 308 GKGRLSKYDADHDWWDEVIELAELKGAEKITAA---RGRVCAVCE 349 (390)
Q Consensus 308 ~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~---~g~l~i~g~ 349 (390)
..+.|.+||+++.+....-.+|.. ...+++.. ++.|||...
T Consensus 218 ~~~~v~~~d~~tG~~~~~i~~p~~-~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 218 NGGRVIRLDPVTGKRLQTVKLPVD-KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TTTEEEEECTTTCCEEEEEECSSS-BEEEEEEESGGGCEEEEEEB
T ss_pred CCCEEEEEcCCCceEEEEEECCCC-CceEEEEeCCCCCEEEEEcC
Confidence 667899999997765544444422 22223322 247888763
No 148
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.05 E-value=0.89 Score=41.79 Aligned_cols=181 Identities=7% Similarity=-0.077 Sum_probs=93.9
Q ss_pred CCcEEEeCCCC-ce-ecCCCCCCCCcceEEEEE---CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccE-----Ec
Q 016368 164 ASPLAFNPQSN-TW-FFGPQLSIPRRWCAMGSV---GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWE-----KK 233 (390)
Q Consensus 164 ~~~~~~dp~t~-~W-~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~-----~~ 233 (390)
..+.+||.... +. ..+..+......-....+ ++.+++.|+.+. .+.+||..++. .. .+
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg--------~v~vw~~~~~~----~~~~~~~~~ 124 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC--------TVMVWEIPDGG----LVLPLREPV 124 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS--------EEEEEECCTTC----CSSCBCSCS
T ss_pred CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC--------eEEEEEccCCC----CccccCCce
Confidence 46888887543 22 112222211222222222 566777777654 78899998875 31 11
Q ss_pred ccCCCCCccccceEEEEE-CC-EEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCc
Q 016368 234 AQLKDGRFSREAVEAVGF-KG-NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGR 311 (390)
Q Consensus 234 ~~~~~~~~~r~~~~~~~~-~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~ 311 (390)
..+..... ...+++.. ++ .+++.|+ ....+.+||..+.+....-..........+++...++.+++.++.++.
T Consensus 125 ~~~~~h~~--~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 125 ITLEGHTK--RVGIVAWHPTAQNVLLSAG---CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp EEEECCSS--CEEEEEECSSBTTEEEEEE---TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEecCCCC--eEEEEEECcCCCCEEEEEc---CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc
Confidence 11111100 01223332 33 3555532 234577899988754432100011111223332247888888888999
Q ss_pred EEEEECCCCceEEccccccccc--ceeEEEE-CCEEEEEe---eCCceEEEEEcCCC
Q 016368 312 LSKYDADHDWWDEVIELAELKG--AEKITAA-RGRVCAVC---ENGERIMVVDVLAS 362 (390)
Q Consensus 312 v~~yd~~~~~W~~i~~~p~~r~--~~~~~~~-~g~l~i~g---~~~~~v~~~d~~~~ 362 (390)
+..||+.+.+-..... ..... ...+... ++++++.| ..+..+.+||+.+.
T Consensus 200 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 200 VRVIEPRKGTVVAEKD-RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp EEEEETTTTEEEEEEE-CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred EEEEeCCCCceeeeec-cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccc
Confidence 9999998765332210 11111 2233333 78888886 46778999998774
No 149
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.03 E-value=0.67 Score=47.32 Aligned_cols=178 Identities=12% Similarity=0.018 Sum_probs=95.4
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+..++.....+..+... .+.-.++++. +++||+.-.. ...+.++++.........+.+.......
T Consensus 404 ~~Ir~i~l~~~~~~~l~~~--~~~~~gl~~d~~~~~lY~sD~~--------~~~I~~~~l~g~~~~~~~~~vi~~~l~~- 472 (791)
T 3m0c_C 404 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSSYDTVISRDIQA- 472 (791)
T ss_dssp SSEEEECTTSCCCEEEECS--CSSEEEEEEETTTTEEEEEETT--------TTEEEEEEC--------CEEEECSSCSC-
T ss_pred cceeEeeccCCcceeeecC--CCceEEEeecccCCeeEEeecc--------ceeEEEEeccCCCCCcceeEEEecCCCC-
Confidence 3566666665555443221 1222334443 6889987432 3467777776421000033332211111
Q ss_pred cccceEEEE--ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCc-eEEE-eeCCeEEEEeCCC-CcEEEEE
Q 016368 242 SREAVEAVG--FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGP-AAST-MNEEELYVVNEGK-GRLSKYD 316 (390)
Q Consensus 242 ~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~-~~~g~lyv~gg~~-~~v~~yd 316 (390)
..++++ .+++||+. ..+...+.++++....-+.+.. .....+ ++++ ..+|.||+..... ..|++++
T Consensus 473 ---P~GLAvD~~~~~LY~t---D~~~~~I~v~~ldG~~~~~l~~---~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~ 543 (791)
T 3m0c_C 473 ---PDGLAVDWIHSNIYWT---DSVLGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGG 543 (791)
T ss_dssp ---CCEEEEETTTTEEEEE---ETTTTEEEEEETTSSSEEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ---cceeeeeecCCcEEEE---ecCCCeEEEEeCCCCeEEEEEe---CCCCCcceEEEecCCCCEEEecCCCCCeEEEEe
Confidence 133444 46799998 3345678899988665544432 111112 3343 2368999998443 6899999
Q ss_pred CCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 317 ADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 317 ~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+....=+.+..- ......++++- +++||+.=.....|.++|+...
T Consensus 544 ~dG~~~~~lv~~-~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 544 LNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp TTSCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cCCCceEEEEeC-CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 986554444321 12234456554 7889998544567888887654
No 150
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.03 E-value=0.75 Score=41.17 Aligned_cols=201 Identities=8% Similarity=0.038 Sum_probs=98.8
Q ss_pred eEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCC--CCcc-eEEEEE-CCEEEEEeccCCCCCCCccCeE
Q 016368 141 QSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSI--PRRW-CAMGSV-GGVVYVASGVGAHYRGDVARSM 216 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~--~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~ 216 (390)
.++.....+++.|+.. ..+.+||..++....+..+.. .... .+++.. ++.+++.|+.+. .+
T Consensus 18 ~~~~~s~~~las~~~D-------~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~--------~v 82 (330)
T 2hes_X 18 WSFDFSQGILATGSTD-------RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS--------TV 82 (330)
T ss_dssp EEEEEETTEEEEEESS-------SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS--------CE
T ss_pred eeeccCCCEEEEEcCC-------CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC--------cE
Confidence 4444445555555431 467888887765433322211 1111 122222 566777777654 67
Q ss_pred EEEECCCCcc-ccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCC--CCeEecCCCCCCCCCCc
Q 016368 217 KKWDLKSDRE-DWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVEL--DKWKEMPEGMHAGWNGP 292 (390)
Q Consensus 217 ~~yd~~t~~~-~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~ 292 (390)
.+||...... ...++.+..+...... -.+++.. +++..+.|+ ....+.+||... ..++.+...........
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~--V~~v~~sp~g~~las~s---~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENE--VKGVAWSNDGYYLATCS---RDKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----C--EEEEEECTTSCEEEEEE---TTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred EEEEcccCcCccccceeEEEEcCCCCc--EEEEEECCCCCEEEEEe---CCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 7888753210 0003333222211110 1222222 566555532 234567888843 34443322011111111
Q ss_pred eEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--C--CEEEEEeeCCceEEEEEcCC
Q 016368 293 AASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--R--GRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 293 ~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~--g~l~i~g~~~~~v~~~d~~~ 361 (390)
.+....++.+++.++.++.+..||..+..|..+..+.........+.+ + +..++.|+.+..|.+||+..
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 222224788888999999999999887778776655544333322232 2 34555556677888888754
No 151
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.69 Score=40.33 Aligned_cols=186 Identities=9% Similarity=0.006 Sum_probs=90.5
Q ss_pred ecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCC
Q 016368 145 VRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKS 223 (390)
Q Consensus 145 ~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 223 (390)
.++..++.++. -..+.+||..+++-...-.... ..-.+++.. ++++++.|+.+. .+.+|+...
T Consensus 27 ~~~~~l~s~~~-------dg~v~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg--------~i~~~~~~~ 90 (313)
T 3odt_A 27 VDDSKVASVSR-------DGTVRLWSKDDQWLGTVVYTGQ-GFLNSVCYDSEKELLLFGGKDT--------MINGVPLFA 90 (313)
T ss_dssp EETTEEEEEET-------TSEEEEEEESSSEEEEEEEECS-SCEEEEEEETTTTEEEEEETTS--------CEEEEETTC
T ss_pred cCCCEEEEEEc-------CCcEEEEECCCCEEEEEeecCC-ccEEEEEECCCCCEEEEecCCC--------eEEEEEeee
Confidence 45566666543 2468889987664332211111 111222222 566777776654 566777655
Q ss_pred CccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEE-eeCCeE
Q 016368 224 DREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAAST-MNEEEL 302 (390)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~g~l 302 (390)
... .+.+..+..... ....+.+++.+++.|+ ....+.+||........... ......+.. ..++..
T Consensus 91 ~~~---~~~~~~~~~~~~---~i~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~~----~~~v~~~~~~~~~~~~ 157 (313)
T 3odt_A 91 TSG---EDPLYTLIGHQG---NVCSLSFQDGVVISGS---WDKTAKVWKEGSLVYNLQAH----NASVWDAKVVSFSENK 157 (313)
T ss_dssp CTT---SCC-CEECCCSS---CEEEEEEETTEEEEEE---TTSEEEEEETTEEEEEEECC----SSCEEEEEEEETTTTE
T ss_pred cCC---CCcccchhhccc---CEEEEEecCCEEEEEe---CCCCEEEEcCCcEEEecccC----CCceeEEEEccCCCCE
Confidence 431 222222221111 1223333555555531 23456788833222222111 111112222 127888
Q ss_pred EEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 303 YVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 303 yv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.++.++.+..||.... -..+. .........+... ++. ++.|+.+..+.+||+.+.
T Consensus 158 l~~~~~d~~i~i~d~~~~-~~~~~-~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 158 FLTASADKTIKLWQNDKV-IKTFS-GIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp EEEEETTSCEEEEETTEE-EEEEC-SSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred EEEEECCCCEEEEecCce-EEEEe-ccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 888988999999993321 11111 1111122233333 666 666677779999998765
No 152
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.99 E-value=0.82 Score=40.94 Aligned_cols=186 Identities=12% Similarity=0.088 Sum_probs=94.4
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC-----
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK----- 237 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~----- 237 (390)
+.++++|+.+++.........-..-.++++. +++||+..... ..+.+||+...... -..+....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~--------~~v~~~~~~g~~~~--~~~~~~~~~~g~~ 138 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL--------HQVFKLDPHSKEGP--LLILGRSMQPGSD 138 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT--------TEEEEECTTCSSCC--SEEESBTTBCCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCC--------CEEEEEeCCCCeEE--EEEecccCCCCCC
Confidence 3689999988765432110000111233333 67899875433 37889998765100 22222110
Q ss_pred CCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCC------CCCCCCc-eEEEeeC-CeEEEEeC
Q 016368 238 DGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGM------HAGWNGP-AASTMNE-EELYVVNE 307 (390)
Q Consensus 238 ~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~------~~~~~~~-~~~~~~~-g~lyv~gg 307 (390)
..... ....+++. ++.+|+... .+...+.+||.....-..+...- +.....+ ++++..+ |.||+...
T Consensus 139 ~~~~~-~P~~ia~~~~~g~lyv~d~--~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 139 QNHFC-QPTDVAVEPSTGAVFVSDG--YCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp TTCCS-SEEEEEECTTTCCEEEEEC--SSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred ccccC-CCcEEEEeCCCCeEEEEeC--CCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 00010 02445544 689999942 13456788996544333332100 0111112 3443234 89999998
Q ss_pred CCCcEEEEECCCCceEEccccc-ccccceeEEEECCEEEEEe-------eCCceEEEEEcCCC
Q 016368 308 GKGRLSKYDADHDWWDEVIELA-ELKGAEKITAARGRVCAVC-------ENGERIMVVDVLAS 362 (390)
Q Consensus 308 ~~~~v~~yd~~~~~W~~i~~~p-~~r~~~~~~~~~g~l~i~g-------~~~~~v~~~d~~~~ 362 (390)
.++.|.+||+++.+....-..+ ......+++...+.+|... .....+.++|..+.
T Consensus 216 ~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 216 ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC
T ss_pred CCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC
Confidence 8889999999866654432222 1112222322233444332 23447888887654
No 153
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.67 Score=41.66 Aligned_cols=151 Identities=11% Similarity=0.036 Sum_probs=81.9
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcc--cCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKA--QLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~--~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd 272 (390)
++.+++.||.+. .+.+||..++.. -..+. ....-.... ....+..++.+.+.. ......+||
T Consensus 47 d~~~l~sg~~Dg--------~v~iwd~~~~~~---~~~~~~~~v~~~~~~~-~~~s~s~D~~i~~w~----~~~~~~~~~ 110 (343)
T 3lrv_A 47 DKWVCMCRCEDG--------ALHFTQLKDSKT---ITTITTPNPRTGGEHP-AIISRGPCNRLLLLY----PGNQITILD 110 (343)
T ss_dssp EEEEEEEEEETT--------EEEEEEESSSSC---EEEEEEECCCTTCCCC-SEEEECSTTEEEEEE----TTTEEEEEE
T ss_pred CCCEEEEECCCC--------cEEEEECCCCcE---EEEEecCCceeeeeCC-ceEEecCCCeEEEEE----ccCceEEee
Confidence 556777777765 788888877651 11111 111000100 122223466666663 233456788
Q ss_pred CCCCC-eEecCCCCCCCCCCceEEEee--CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEe
Q 016368 273 VELDK-WKEMPEGMHAGWNGPAASTMN--EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVC 348 (390)
Q Consensus 273 ~~~~~-W~~~~~~~~~~~~~~~~~~~~--~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g 348 (390)
..+.+ -..... . .......+.... ++.+++.++.++.+..||..+.+-..+..........++... ++.+++.|
T Consensus 111 ~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 111 SKTNKVLREIEV-D-SANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp TTTCCEEEEEEC-C-CSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred cCCcceeEEeec-C-CCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 77765 322221 1 111111222123 678888899999999999988765433322211122233333 67788887
Q ss_pred eCCceEEEEEcCCCC
Q 016368 349 ENGERIMVVDVLASP 363 (390)
Q Consensus 349 ~~~~~v~~~d~~~~~ 363 (390)
+.+..|.+||+.+..
T Consensus 189 ~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 189 SPDGILDVYNLSSPD 203 (343)
T ss_dssp CTTSCEEEEESSCTT
T ss_pred cCCCEEEEEECCCCC
Confidence 778899999998763
No 154
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.97 E-value=0.35 Score=43.37 Aligned_cols=179 Identities=8% Similarity=-0.078 Sum_probs=92.0
Q ss_pred CcEEEeCCCCce-ecCCCCCC---CCcceEEEEE-C----CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc
Q 016368 165 SPLAFNPQSNTW-FFGPQLSI---PRRWCAMGSV-G----GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ 235 (390)
Q Consensus 165 ~~~~~dp~t~~W-~~~~~~~~---~r~~~~~~~~-~----~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~ 235 (390)
.+.+||..+++. ..+..... ...-.+++.. + +.+++.|+.+. .+.+||..+.. -...-.
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg--------~i~v~d~~~~~----~~~~~~ 112 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG--------IIRIINPITMQ----CIKHYV 112 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC--------EEEEECTTTCC----EEEEEE
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC--------EEEEEEchhce----Eeeeec
Confidence 688888876543 22222111 1112222222 3 57777777654 78899988766 221111
Q ss_pred CCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCC-CCCCCceEEEeeCCeEEEEeCCCCcE
Q 016368 236 LKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMH-AGWNGPAASTMNEEELYVVNEGKGRL 312 (390)
Q Consensus 236 ~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~-~~~~~~~~~~~~~g~lyv~gg~~~~v 312 (390)
..... -.+++.. ++.+++.|+ ....+.+||..+.+-...-.... .......++...++..++.++.++.+
T Consensus 113 ~~~~~----i~~~~~~~~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 185 (366)
T 3k26_A 113 GHGNA----INELKFHPRDPNLLLSVS---KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSL 185 (366)
T ss_dssp SCCSC----EEEEEECSSCTTEEEEEE---TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCc----EEEEEECCCCCCEEEEEe---CCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCE
Confidence 11111 1333332 556666642 23457789998765433221011 11112223322467888888889999
Q ss_pred EEEECCCCceEEcccc--------------------------cccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 313 SKYDADHDWWDEVIEL--------------------------AELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 313 ~~yd~~~~~W~~i~~~--------------------------p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
..||..+.+-...-.. .........+.+.+.+++.++.+..+.+||+.+.
T Consensus 186 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 186 KLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp EEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESST
T ss_pred EEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCc
Confidence 9999886432110000 0011122222232556666677789999998765
No 155
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.92 E-value=0.5 Score=43.54 Aligned_cols=189 Identities=8% Similarity=0.063 Sum_probs=94.3
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
++..++.|+. -..+.+||..+++-...-.- ....-.+++.. ++..++.|+.+. .+.+||..++
T Consensus 134 dg~~l~s~~~-------d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~--------~v~iwd~~~~ 197 (393)
T 1erj_A 134 DGKFLATGAE-------DRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGDR--------TVRIWDLRTG 197 (393)
T ss_dssp TSSEEEEEET-------TSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTT
T ss_pred CCCEEEEEcC-------CCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCCC--------cEEEEECCCC
Confidence 3455555543 24688999887754321110 11111222222 455556666553 7889999887
Q ss_pred ccccccEEcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEe-cCCCC--CCCCCC--ceEEEe
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGM--HAGWNG--PAASTM 297 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~--~~~~~~--~~~~~~ 297 (390)
. ....-..... ..+++.. ++++++.|+ ....+.+||..+..-.. +.... ..+... .+++..
T Consensus 198 ~----~~~~~~~~~~-----v~~~~~~~~~~~~l~~~s---~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 265 (393)
T 1erj_A 198 Q----CSLTLSIEDG-----VTTVAVSPGDGKYIAAGS---LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 265 (393)
T ss_dssp E----EEEEEECSSC-----EEEEEECSTTCCEEEEEE---TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC
T ss_pred e----eEEEEEcCCC-----cEEEEEECCCCCEEEEEc---CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC
Confidence 6 4332222211 1223332 566666642 23446789988765432 21100 011111 122223
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCceEEcc----------ccccccc-ceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDWWDEVI----------ELAELKG-AEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~W~~i~----------~~p~~r~-~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+|+.++.|+.++.+..||..+..-.... .+..... ..+++.. ++..++.|+.+..|.+||+.+.
T Consensus 266 ~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 266 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred CCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 47888889989999999998753221110 0111111 1222222 5566666677778999998765
No 156
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.90 E-value=0.028 Score=51.49 Aligned_cols=149 Identities=12% Similarity=0.155 Sum_probs=79.5
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
++++++.|+.+. .+.+||..++. |+.+..+...... -.+++.. ++++.+.|+ ....+.+||.
T Consensus 22 ~g~~l~~~~~d~--------~i~iw~~~~~~----~~~~~~~~~h~~~--v~~~~~s~~~~~l~s~s---~d~~v~vwd~ 84 (377)
T 3dwl_C 22 QRTEFVTTTATN--------QVELYEQDGNG----WKHARTFSDHDKI--VTCVDWAPKSNRIVTCS---QDRNAYVYEK 84 (377)
T ss_dssp SSSEEECCCSSS--------CBCEEEEETTE----EEECCCBCCCSSC--EEEEEECTTTCCEEEEE---TTSSEEEC--
T ss_pred CCCEEEEecCCC--------EEEEEEccCCc----eEEEEEEecCCce--EEEEEEeCCCCEEEEEe---CCCeEEEEEc
Confidence 455566665543 67789998887 8777766432211 1233332 455555532 2345778998
Q ss_pred CCCC-eEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc-eEEcccccc-cccce-eEEEE-CCEEEEEe
Q 016368 274 ELDK-WKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW-WDEVIELAE-LKGAE-KITAA-RGRVCAVC 348 (390)
Q Consensus 274 ~~~~-W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~-W~~i~~~p~-~r~~~-~~~~~-~g~l~i~g 348 (390)
.+.. |...............+....++++++.++.++.+..||..+.. |..+..+.. ..... .+... ++++++.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 8776 54433211111111222222468888888889999999998764 544444443 23333 33333 66777777
Q ss_pred eCCceEEEEEcC
Q 016368 349 ENGERIMVVDVL 360 (390)
Q Consensus 349 ~~~~~v~~~d~~ 360 (390)
+.+..+.+||+.
T Consensus 165 ~~d~~i~iwd~~ 176 (377)
T 3dwl_C 165 CADRKAYVLSAY 176 (377)
T ss_dssp ESSSCEEEEEEC
T ss_pred eCCCEEEEEEEE
Confidence 777889999985
No 157
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.86 E-value=0.39 Score=43.02 Aligned_cols=145 Identities=13% Similarity=0.050 Sum_probs=76.2
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
+++.++.|+.+. .+.+||..++. +.+..+...... ..+++.. ++..++.++ ....+.+||.
T Consensus 186 ~~~~l~~~~~dg--------~i~i~d~~~~~-----~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~---~d~~i~v~d~ 247 (369)
T 3zwl_B 186 KGKYIIAGHKDG--------KISKYDVSNNY-----EYVDSIDLHEKS--ISDMQFSPDLTYFITSS---RDTNSFLVDV 247 (369)
T ss_dssp GGCEEEEEETTS--------EEEEEETTTTT-----EEEEEEECCSSC--EEEEEECTTSSEEEEEE---TTSEEEEEET
T ss_pred CCCEEEEEcCCC--------EEEEEECCCCc-----EeEEEEecCCCc--eeEEEECCCCCEEEEec---CCceEEEEEC
Confidence 456666666543 78899998832 222221111110 1223322 565555531 2345778998
Q ss_pred CCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCC--------------cEEEEECCCCceEEcccccccccceeEEE
Q 016368 274 ELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKG--------------RLSKYDADHDWWDEVIELAELKGAEKITA 339 (390)
Q Consensus 274 ~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~--------------~v~~yd~~~~~W~~i~~~p~~r~~~~~~~ 339 (390)
.+.+-...-. .......++...++..+++++.++ .+..||..+.+ .+..+...........
T Consensus 248 ~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~ 322 (369)
T 3zwl_B 248 STLQVLKKYE---TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE--EIGRVQGHFGPLNTVA 322 (369)
T ss_dssp TTCCEEEEEE---CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC--EEEEEECCSSCEEEEE
T ss_pred CCCceeeeec---CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc--chhheecccCcEEEEE
Confidence 8765433211 111112222235666666666554 67788876653 2222222223333333
Q ss_pred E--CCEEEEEeeCCceEEEEEcCCC
Q 016368 340 A--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 340 ~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+ ++++++.++.+..|.+||+.+.
T Consensus 323 ~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 323 ISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ECTTSSEEEEEETTSEEEEEEECHH
T ss_pred ECCCCCEEEEEcCCCeEEEEECccc
Confidence 3 6777777777889999998764
No 158
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.86 E-value=0.62 Score=41.55 Aligned_cols=179 Identities=8% Similarity=-0.021 Sum_probs=92.7
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-C---CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-G---GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~---~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~ 239 (390)
..+.+||..+++............-.+++.. + +.+++.|+.+. .+.+||..+.... -..+..-...
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg--------~i~iwd~~~~~~~--~~~~~~~~~~ 113 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG--------NLHIWNLEAPEMP--VYSVKGHKEI 113 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS--------CEEEECTTSCSSC--SEEECCCSSC
T ss_pred cEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC--------eEEEEeCCCCCcc--EEEEEecccc
Confidence 4688999888766443222111111222222 2 47777776654 6788888765400 2222211111
Q ss_pred CccccceEEEE-------ECCEEEEEcccCCCCceeEEEeCCCCC--eEecCCCCCC-CCCCceEE----EeeCCeEEEE
Q 016368 240 RFSREAVEAVG-------FKGNLCMVNLKGNGAKDGAIYNVELDK--WKEMPEGMHA-GWNGPAAS----TMNEEELYVV 305 (390)
Q Consensus 240 ~~~r~~~~~~~-------~~g~lyv~gg~g~~~~~~~~yd~~~~~--W~~~~~~~~~-~~~~~~~~----~~~~g~lyv~ 305 (390)
-.++.. -++...+.|+ ....+.+||+.+.. ...+...... ......++ ...++.+++.
T Consensus 114 -----v~~~~~~~~~~~s~~~~~l~~~~---~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 185 (357)
T 3i2n_A 114 -----INAIDGIGGLGIGEGAPEIVTGS---RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCA 185 (357)
T ss_dssp -----EEEEEEESGGGCC-CCCEEEEEE---TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred -----eEEEeeccccccCCCccEEEEEe---CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEE
Confidence 122211 2455555532 23457789988764 3333321111 11111121 1147888888
Q ss_pred eCCCCcEEEEECCCCceEEcccccccccceeEEEE----CCEEEEEeeCCceEEEEEcCCC
Q 016368 306 NEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA----RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 306 gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~----~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.++.+..||..+..-..... .......+... ++..++.|..+..+.+||+.+.
T Consensus 186 ~~~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 186 GYDNGDIKLFDLRNMALRWETN--IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp EETTSEEEEEETTTTEEEEEEE--CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred EccCCeEEEEECccCceeeecC--CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 9888999999998765432221 11222233333 5677777777778999987654
No 159
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.84 E-value=0.15 Score=46.29 Aligned_cols=152 Identities=12% Similarity=0.112 Sum_probs=84.2
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
++++++.||.+. .+.+||..++. |.....+...... .-.+++. -++++.+.|+ ....+.++|.
T Consensus 27 ~g~~las~~~D~--------~i~iw~~~~~~----~~~~~~~~~~h~~-~v~~~~~sp~g~~l~s~s---~D~~v~iw~~ 90 (345)
T 3fm0_A 27 AGTLLASCGGDR--------RIRIWGTEGDS----WICKSVLSEGHQR-TVRKVAWSPCGNYLASAS---FDATTCIWKK 90 (345)
T ss_dssp TSSCEEEEETTS--------CEEEEEEETTE----EEEEEEECSSCSS-CEEEEEECTTSSEEEEEE---TTSCEEEEEE
T ss_pred CCCEEEEEcCCC--------eEEEEEcCCCc----ceeeeeeccccCC-cEEEEEECCCCCEEEEEE---CCCcEEEEEc
Confidence 566777777654 67888988887 7533222111100 0122222 2566666542 2344668888
Q ss_pred CCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCC-ceEEcccccccccceeEEEE--CCEEEEEeeC
Q 016368 274 ELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHD-WWDEVIELAELKGAEKITAA--RGRVCAVCEN 350 (390)
Q Consensus 274 ~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~-~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~ 350 (390)
.++.+..+...........+++...++++++.|+.++.+..||..+. .+..+..+.........+.+ ++.+++.|+.
T Consensus 91 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 91 NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY 170 (345)
T ss_dssp CCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET
T ss_pred cCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC
Confidence 77766544331111111122332347888999999999999998764 34434333333332333332 5667777777
Q ss_pred CceEEEEEcCCC
Q 016368 351 GERIMVVDVLAS 362 (390)
Q Consensus 351 ~~~v~~~d~~~~ 362 (390)
+..+.+||..+.
T Consensus 171 d~~i~~w~~~~~ 182 (345)
T 3fm0_A 171 DDTVKLYREEED 182 (345)
T ss_dssp TSCEEEEEEETT
T ss_pred CCcEEEEEecCC
Confidence 778888887654
No 160
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.84 E-value=0.5 Score=42.19 Aligned_cols=179 Identities=9% Similarity=0.057 Sum_probs=96.7
Q ss_pred CCcEEEeCCCCceecCCCCCC------------------CCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSI------------------PRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKS 223 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~------------------~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t 223 (390)
..+++||+.+++++....... ...-++++.. ++.|||.... ..+.+||+.+
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~---------~~i~~~d~~~ 110 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY---------YHLSVVGSEG 110 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT---------TEEEEECTTC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC---------CCEEEEeCCC
Confidence 578899998876654321000 0112345555 5789987422 2478899887
Q ss_pred CccccccEEcccCCCC-CccccceEEEEE--CCEEEEEcccC--------------CCCceeEEEeCCCCCeEecCCCCC
Q 016368 224 DREDWKWEKKAQLKDG-RFSREAVEAVGF--KGNLCMVNLKG--------------NGAKDGAIYNVELDKWKEMPEGMH 286 (390)
Q Consensus 224 ~~~~~~W~~~~~~~~~-~~~r~~~~~~~~--~g~lyv~gg~g--------------~~~~~~~~yd~~~~~W~~~~~~~~ 286 (390)
+. .+.+...... ... ....+++. +|.+|+..... .....+.+||+.+.+.+.+.....
T Consensus 111 g~----~~~~~~~~~~~~~~-~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~ 185 (322)
T 2fp8_A 111 GH----ATQLATSVDGVPFK-WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH 185 (322)
T ss_dssp EE----CEEEESEETTEECS-CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES
T ss_pred CE----EEEecccCCCCccc-ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc
Confidence 76 5554332111 010 01334443 67899873110 011346689988776654432111
Q ss_pred CCCCCceEEEeeCC-eEEEEeCCCCcEEEEECCCC---ceEEcccccccccceeEEEE-CCEEEEEeeC----------C
Q 016368 287 AGWNGPAASTMNEE-ELYVVNEGKGRLSKYDADHD---WWDEVIELAELKGAEKITAA-RGRVCAVCEN----------G 351 (390)
Q Consensus 287 ~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd~~~~---~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~----------~ 351 (390)
....++...+| .||+.....+.|++||..+. ..+.+..++. ..+++.- +|.|||.... .
T Consensus 186 ---~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g---P~gi~~d~~G~l~va~~~~~~~~~~~~~~ 259 (322)
T 2fp8_A 186 ---VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN---PGNIKRNADGHFWVSSSEELDGNMHGRVD 259 (322)
T ss_dssp ---CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS---EEEEEECTTSCEEEEEEEETTSSTTSCEE
T ss_pred ---cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC---CCCeEECCCCCEEEEecCcccccccCCCc
Confidence 11234432455 48888776779999998753 3444333322 3344443 6788887533 3
Q ss_pred ceEEEEEcCCC
Q 016368 352 ERIMVVDVLAS 362 (390)
Q Consensus 352 ~~v~~~d~~~~ 362 (390)
..|+.+|....
T Consensus 260 ~~v~~~d~~G~ 270 (322)
T 2fp8_A 260 PKGIKFDEFGN 270 (322)
T ss_dssp EEEEEECTTSC
T ss_pred cEEEEECCCCC
Confidence 46788886543
No 161
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.80 E-value=0.0036 Score=61.79 Aligned_cols=33 Identities=18% Similarity=0.437 Sum_probs=25.7
Q ss_pred CCCCCCcHHHHHHHHhcCC----chhhHhhhHhHHHh
Q 016368 32 LLLPGLPNHLADRCLSSLP----PALLFSVCHSWRRL 64 (390)
Q Consensus 32 ~~~~~LP~dl~~~iL~rLP----l~~~r~Vck~W~~l 64 (390)
..|..||+|++.+||++|| +.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 5678899999999999999 77888999999988
No 162
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.78 E-value=0.71 Score=49.51 Aligned_cols=177 Identities=8% Similarity=-0.004 Sum_probs=92.3
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcce-EEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCC---
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWC-AMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKD--- 238 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~--- 238 (390)
..+.+||..+++....-. ...... +++.. ++..++.|+.++ .+.+||..+.. -........
T Consensus 723 ~~v~vwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~dg--------~v~vwd~~~~~----~~~~~~~~~~~~ 788 (1249)
T 3sfz_A 723 FFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDELLASCSADG--------TLRLWDVRSAN----ERKSINVKRFFL 788 (1249)
T ss_dssp SCEEEEETTSSSEEEEEC--CCSSCEEEEEECSSTTEEEEEESSS--------EEEEEEGGGTE----EEEEEECCCCC-
T ss_pred CeEEEEECCCcchhheec--CCCCCEEEEEEecCCCEEEEEECCC--------eEEEEeCCCCc----ccceeccccccc
Confidence 468899988775432111 111111 12222 566666666654 68888887765 221111000
Q ss_pred -------CCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCc
Q 016368 239 -------GRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGR 311 (390)
Q Consensus 239 -------~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~ 311 (390)
.........+..-+|+..+++ ......+||..+........ .........+....++.+++.++.++.
T Consensus 789 ~~~~~~~~~~~~v~~~~~s~dg~~l~~~----~~~~v~~~d~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~dg~ 863 (1249)
T 3sfz_A 789 SSEDPPEDVEVIVKCCSWSADGDKIIVA----AKNKVLLFDIHTSGLLAEIH-TGHHSTIQYCDFSPYDHLAVIALSQYC 863 (1249)
T ss_dssp -------CCCCCBCCCCBCTTSSEEEEE----ETTEEEEEETTTCCEEEEEE-CSSSSCCCEEEECSSTTEEEEECSSSC
T ss_pred ccCCccccccceEEEEEECCCCCEEEEE----cCCcEEEEEecCCCceeEEc-CCCCCceEEEEEcCCCCEEEEEeCCCe
Confidence 000000011112355555554 23457788888776543322 111222223333368899999999999
Q ss_pred EEEEECCCCceEEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 312 LSKYDADHDWWDEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 312 v~~yd~~~~~W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
+..||..+.. .+..+....... ++... +|..++.++.+..+.+||+.+
T Consensus 864 v~vwd~~~~~--~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 864 VELWNIDSRL--KVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp EEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHH
T ss_pred EEEEEcCCCc--eeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccc
Confidence 9999988653 333333222222 23333 666777767777899998653
No 163
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.77 E-value=1.1 Score=40.85 Aligned_cols=137 Identities=9% Similarity=0.109 Sum_probs=73.9
Q ss_pred eEEEEECCCCccccccEEcc--cCCCCCccccceEEEE--ECCEEEEEcccCCCCceeEEEeCCCC--CeEecCCCCCCC
Q 016368 215 SMKKWDLKSDREDWKWEKKA--QLKDGRFSREAVEAVG--FKGNLCMVNLKGNGAKDGAIYNVELD--KWKEMPEGMHAG 288 (390)
Q Consensus 215 ~~~~yd~~t~~~~~~W~~~~--~~~~~~~~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd~~~~--~W~~~~~~~~~~ 288 (390)
.+.+||..++. -...- ..+..... ...+.+. .++.+++.|+ ....+.+||+... .-..+.. ..
T Consensus 181 ~i~~wd~~~~~----~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~sgs---~D~~v~~wd~~~~~~~~~~~~~---h~ 249 (380)
T 3iz6_a 181 TCVLWDVTTGQ----RISIFGSEFPSGHTA-DVLSLSINSLNANMFISGS---CDTTVRLWDLRITSRAVRTYHG---HE 249 (380)
T ss_dssp CEEEECTTTCC----EEEEECCCSSSSCCS-CEEEEEECSSSCCEEEEEE---TTSCEEEEETTTTCCCCEEECC---CS
T ss_pred cEEEEEcCCCc----EEEEeecccCCCCcc-CeEEEEeecCCCCEEEEEE---CCCeEEEEECCCCCcceEEECC---cC
Confidence 68889998876 33221 11111110 0122222 2566777642 2345678998632 2222211 11
Q ss_pred CCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccc------cceeEEE-ECCEEEEEeeCCceEEEEEcCC
Q 016368 289 WNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELK------GAEKITA-ARGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 289 ~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r------~~~~~~~-~~g~l~i~g~~~~~v~~~d~~~ 361 (390)
..-.+++...++..++.|+.++.+..||..+..-...-.....+ ...+++. .+|++++.|..+..+.+||+..
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC
Confidence 11223333357889999999999999999876543322111111 1122333 3778888877788999999865
Q ss_pred C
Q 016368 362 S 362 (390)
Q Consensus 362 ~ 362 (390)
.
T Consensus 330 ~ 330 (380)
T 3iz6_a 330 A 330 (380)
T ss_dssp C
T ss_pred C
Confidence 4
No 164
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.77 E-value=0.074 Score=54.15 Aligned_cols=151 Identities=9% Similarity=0.024 Sum_probs=86.3
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-C--CEEEEEcccCCCCceeEEE
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-K--GNLCMVNLKGNGAKDGAIY 271 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~--g~lyv~gg~g~~~~~~~~y 271 (390)
+++.++.|+.++ .+.+||..++. +..+..+...... -.+++.. + +...+.|+ ....+.+|
T Consensus 20 dg~~latg~~dg--------~I~vwd~~~~~----~~~~~~l~~h~~~--V~~l~~s~~~~~~~l~s~s---~Dg~I~vw 82 (753)
T 3jro_A 20 YGKRLATCSSDK--------TIKIFEVEGET----HKLIDTLTGHEGP--VWRVDWAHPKFGTILASCS---YDGKVLIW 82 (753)
T ss_dssp SSCCEEEEETTT--------EEEEEEEETTE----EEEEEEECCCSSC--EEEEEECCTTSCSEEEEEE---TTSCEEEE
T ss_pred CCCeEEEEECCC--------cEEEEecCCCC----CccceeccCCcCc--eEEEEecCCCCCCEEEEEe---CCCeEEEE
Confidence 455666666554 78889988777 7666554322210 1233332 2 55555542 23457789
Q ss_pred eCCCCCeEecCCCCCCCCCCceEEEeeC--CeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE---------
Q 016368 272 NVELDKWKEMPEGMHAGWNGPAASTMNE--EELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--------- 340 (390)
Q Consensus 272 d~~~~~W~~~~~~~~~~~~~~~~~~~~~--g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--------- 340 (390)
|..+++|..+...........++....+ +.+++.|+.++.+..||..+..-.....+...........+
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 9988887665541112222223332234 78899999999999999987632222222222222222222
Q ss_pred ------CCEEEEEeeCCceEEEEEcCCC
Q 016368 341 ------RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 341 ------~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.+++.|+.++.|.+||+.+.
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETT
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCC
Confidence 3667777777788999998765
No 165
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.75 E-value=0.87 Score=39.30 Aligned_cols=146 Identities=11% Similarity=0.021 Sum_probs=84.7
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd 272 (390)
+++||+.-.. ...+.+||+.+.. -+.+...... . ..++++. ++.+|+.. .+...+.++|
T Consensus 47 ~~~ly~~d~~--------~~~I~~~~~~g~~----~~~~~~~~~~-~---p~~ia~d~~~~~lyv~d---~~~~~I~~~~ 107 (267)
T 1npe_A 47 DKVVYWTDIS--------EPSIGRASLHGGE----PTTIIRQDLG-S---PEGIALDHLGRTIFWTD---SQLDRIEVAK 107 (267)
T ss_dssp TTEEEEEETT--------TTEEEEEESSSCC----CEEEECTTCC-C---EEEEEEETTTTEEEEEE---TTTTEEEEEE
T ss_pred CCEEEEEECC--------CCEEEEEecCCCC----cEEEEECCCC-C---ccEEEEEecCCeEEEEE---CCCCEEEEEE
Confidence 5789987532 3478999998765 3333221111 1 2445543 57999983 2345678898
Q ss_pred CCCCCeEecCCCCCCCCCCceEEEee-CCeEEEEeCC--CCcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEE
Q 016368 273 VELDKWKEMPEGMHAGWNGPAASTMN-EEELYVVNEG--KGRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAV 347 (390)
Q Consensus 273 ~~~~~W~~~~~~~~~~~~~~~~~~~~-~g~lyv~gg~--~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~ 347 (390)
+....-+.+.. .... .-..+++.. ++.||+.... .+.++++++....-+.+... ......+++.- +++||+.
T Consensus 108 ~~g~~~~~~~~-~~~~-~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~-~~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 108 MDGTQRRVLFD-TGLV-NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD-NLGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp TTSCSCEEEEC-SSCS-SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT-TCSCEEEEEEETTTTEEEEE
T ss_pred cCCCCEEEEEE-CCCC-CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC-CCCCCcEEEEcCCCCEEEEE
Confidence 87554333322 1111 112333313 6899998865 46899999876443333221 12234455554 5789998
Q ss_pred eeCCceEEEEEcCCC
Q 016368 348 CENGERIMVVDVLAS 362 (390)
Q Consensus 348 g~~~~~v~~~d~~~~ 362 (390)
-...+.|.++|+.+.
T Consensus 185 d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 185 DAGTHRAECLNPAQP 199 (267)
T ss_dssp ETTTTEEEEEETTEE
T ss_pred ECCCCEEEEEecCCC
Confidence 666778999988653
No 166
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.71 E-value=0.89 Score=44.13 Aligned_cols=144 Identities=10% Similarity=-0.023 Sum_probs=79.4
Q ss_pred CEEEEEecc-CCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEe
Q 016368 196 GVVYVASGV-GAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 196 ~~lyv~GG~-~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd 272 (390)
++.++.|+. +. .+.+||..+.. ... ..+..... ....+.+ ++++.+.|+. ...+.+||
T Consensus 456 ~~~l~~~~~~d~--------~i~~~~~~~~~----~~~-~~~~~~~~---~v~~~~~s~~g~~l~~~~~---dg~i~iw~ 516 (615)
T 1pgu_A 456 QNYVAVGLEEGN--------TIQVFKLSDLE----VSF-DLKTPLRA---KPSYISISPSETYIAAGDV---MGKILLYD 516 (615)
T ss_dssp SSEEEEEETTTS--------CEEEEETTEEE----EEE-ECSSCCSS---CEEEEEECTTSSEEEEEET---TSCEEEEE
T ss_pred CCEEEEeecCCC--------eEEEEECCCcc----ccc-cccCCccC---ceEEEEECCCCCEEEEcCC---CCeEEEee
Confidence 556666655 43 68899998876 532 22211111 1222333 6777776422 34577899
Q ss_pred CCCCCeEecCCCCCCCCCCceEEEee----------CCeEEEEeCCCCcEEEEECCCCceEEcccccccccce-eEEE-E
Q 016368 273 VELDKWKEMPEGMHAGWNGPAASTMN----------EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAE-KITA-A 340 (390)
Q Consensus 273 ~~~~~W~~~~~~~~~~~~~~~~~~~~----------~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~-~~~~-~ 340 (390)
..+.+-...-. .........++... ++++++.++.++.+..||..+.. ..+..+....... ++.. .
T Consensus 517 ~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~h~~~v~~l~~s~ 594 (615)
T 1pgu_A 517 LQSREVKTSRW-AFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWET 594 (615)
T ss_dssp TTTTEEEECCS-CCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-CCEEETTSSTTCEEEEEEEE
T ss_pred CCCCcceeEee-cCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc-eechhhhcCccceEEEEEcC
Confidence 88764332211 00111112222223 78999999999999999998752 2222222222222 2332 3
Q ss_pred CCEEEEEeeCCceEEEEEcCC
Q 016368 341 RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 341 ~g~l~i~g~~~~~v~~~d~~~ 361 (390)
+++ .+.++.++.+.+||+..
T Consensus 595 ~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 595 PST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp TTE-EEEEETTSCEEEEEEC-
T ss_pred CCC-eEEecCCceEEEEeeec
Confidence 778 66667777899998864
No 167
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.68 E-value=1.1 Score=40.11 Aligned_cols=170 Identities=8% Similarity=0.071 Sum_probs=84.0
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccE--EcccCCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWE--KKAQLKDGR 240 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~--~~~~~~~~~ 240 (390)
..+.+||..+++-...........-.+++.. ++.+++.|+.+. .+.+||..+.. -. .+..-....
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg--------~i~iwd~~~~~----~~~~~~~~~h~~~ 216 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG--------ILDVYNLSSPD----QASSRFPVDEEAK 216 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS--------CEEEEESSCTT----SCCEECCCCTTSC
T ss_pred CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCC----CCccEEeccCCCC
Confidence 4688999988765332211111112223333 677777777654 78999998876 32 222101111
Q ss_pred ccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeE-ecCCCCCC--CCCC-ceEEEeeCCeEEEEeCC-CCcEEE
Q 016368 241 FSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWK-EMPEGMHA--GWNG-PAASTMNEEELYVVNEG-KGRLSK 314 (390)
Q Consensus 241 ~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~-~~~~~~~~--~~~~-~~~~~~~~g~lyv~gg~-~~~v~~ 314 (390)
-.+++.. ++...+.|+ ...+.+||+.+.+-. .+.. ... .... .+++...+|+.++.++. ++.+.+
T Consensus 217 ----v~~l~fs~~g~~l~s~~----~~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 217 ----IKEVKFADNGYWMVVEC----DQTVVCFDLRKDVGTLAYPT-YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTI 287 (343)
T ss_dssp ----EEEEEECTTSSEEEEEE----SSBEEEEETTSSTTCBSSCC-CBC-----CCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred ----EEEEEEeCCCCEEEEEe----CCeEEEEEcCCCCcceeecc-cccccccccceEEEECCCCCEEEEecCCCCcEEE
Confidence 1233332 566666642 226789999875421 1111 100 1111 12333346777777655 666666
Q ss_pred EEC--CCCceEE----cccccc---cccceeEEEECCEEEEEeeCCceE
Q 016368 315 YDA--DHDWWDE----VIELAE---LKGAEKITAARGRVCAVCENGERI 354 (390)
Q Consensus 315 yd~--~~~~W~~----i~~~p~---~r~~~~~~~~~g~l~i~g~~~~~v 354 (390)
|+. ....|.. ...... ......++..++.+.++-..++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~~ 336 (343)
T 3lrv_A 288 YKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDSF 336 (343)
T ss_dssp EEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEEECSSEE
T ss_pred EEEcccccceEecCceeEecCccccccceeEEEecCCceEEEEecCCeE
Confidence 655 5667987 222222 111223344467777664444433
No 168
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.67 E-value=0.69 Score=42.22 Aligned_cols=194 Identities=9% Similarity=-0.070 Sum_probs=100.2
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
++.+++++++. .-..+.+||+.+.+-......... -.+++.. ++++++.++.+ .+.+++..++
T Consensus 144 Dg~~la~as~~-----~d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s~~---------~~~~~~~~~~ 207 (365)
T 4h5i_A 144 EGTVAAIASSK-----VPAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYITGS---------SLEVISTVTG 207 (365)
T ss_dssp TSSCEEEEESC-----SSCEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEECSS---------CEEEEETTTC
T ss_pred CCCEEEEEECC-----CCCEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEeccce---------eEEEEEeccC
Confidence 45566555442 224688899988765432221111 1222222 56666655422 4567777776
Q ss_pred ccccccEEcccCCCCCccccceEEEEECCEEEEEcccCC-CCceeEEEeCCCCCeEecCCCCCCCCC--CceEEEeeCCe
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGN-GAKDGAIYNVELDKWKEMPEGMHAGWN--GPAASTMNEEE 301 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~-~~~~~~~yd~~~~~W~~~~~~~~~~~~--~~~~~~~~~g~ 301 (390)
. -............ .......-+++.++.+.... .......+|.................. ..+++...+|+
T Consensus 208 ~----~~~~~~~~~~~~~-v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~ 282 (365)
T 4h5i_A 208 S----CIARKTDFDKNWS-LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE 282 (365)
T ss_dssp C----EEEEECCCCTTEE-EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC
T ss_pred c----ceeeeecCCCCCC-EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC
Confidence 5 3322211111110 01112234777777643211 112344566655544332210111111 12233336899
Q ss_pred EEEEeCCCCcEEEEECCCCceEEcccc-cccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 302 LYVVNEGKGRLSKYDADHDWWDEVIEL-AELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 302 lyv~gg~~~~v~~yd~~~~~W~~i~~~-p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+++.|+.++.|..||..+.+ .+..+ .........+.+ +|+.++-|+.++.|-+||+..+
T Consensus 283 ~lasgs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 283 LAVLASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred ceEEEcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999999999998754 33322 222233333333 7888888788889999998654
No 169
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.67 E-value=0.8 Score=41.68 Aligned_cols=137 Identities=7% Similarity=0.007 Sum_probs=67.0
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE----CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV----GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~ 239 (390)
..+.+||..+++-...-....+. .+.... ++.+++.|+.+. .+.+||..+.. -...-.....
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~v~~~d~~~~~----~~~~~~~~~~ 187 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETV--YSHHMSPVSTKHCLVAVGTRGP--------KVQLCDLKSGS----CSHILQGHRQ 187 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCE--EEEEECSSCSSCCEEEEEESSS--------SEEEEESSSSC----CCEEECCCCS
T ss_pred CeEEEeeCCCCccceeccCCCce--eeeEeecCCCCCcEEEEEcCCC--------eEEEEeCCCcc----eeeeecCCCC
Confidence 46888998877544332222211 122222 344666666553 68899998765 2211111111
Q ss_pred CccccceEEEEE-CCE-EEEEcccCCCCceeEEEeCCCCC--eEecCCC----------CCCCCCC--ceEEEeeCCeEE
Q 016368 240 RFSREAVEAVGF-KGN-LCMVNLKGNGAKDGAIYNVELDK--WKEMPEG----------MHAGWNG--PAASTMNEEELY 303 (390)
Q Consensus 240 ~~~r~~~~~~~~-~g~-lyv~gg~g~~~~~~~~yd~~~~~--W~~~~~~----------~~~~~~~--~~~~~~~~g~ly 303 (390)
. ..+++.. ++. +++.|+ ....+.+||..+.. ...+... ....... ..++...++..+
T Consensus 188 ~----v~~~~~~~~~~~ll~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 260 (408)
T 4a11_B 188 E----ILAVSWSPRYDYILATAS---ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHL 260 (408)
T ss_dssp C----EEEEEECSSCTTEEEEEE---TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEE
T ss_pred c----EEEEEECCCCCcEEEEEc---CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEE
Confidence 1 1223332 333 555532 22346788886542 2221100 0011111 122222477788
Q ss_pred EEeCCCCcEEEEECCCCc
Q 016368 304 VVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 304 v~gg~~~~v~~yd~~~~~ 321 (390)
+.++.++.+..||..+..
T Consensus 261 ~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 261 LTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp EEEETTSCEEEEETTTCC
T ss_pred EEecCCCeEEEEECCCCc
Confidence 888888888999887643
No 170
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.66 E-value=1.1 Score=39.97 Aligned_cols=173 Identities=13% Similarity=0.050 Sum_probs=97.8
Q ss_pred CCcEEEeCCCCceecC-CCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCC----CccccccEEcccC
Q 016368 164 ASPLAFNPQSNTWFFG-PQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKS----DREDWKWEKKAQL 236 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~-~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t----~~~~~~W~~~~~~ 236 (390)
+.+.++|+.+.+...+ +.+ ..-.+.+.. +++||+.-.. ...+.++++.+ .. -+.+...
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~---~~p~g~~~d~~~~~ly~~D~~--------~~~I~~~~~~g~~~~~~----~~~~~~~ 74 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNL---RNVVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSS----YDTVISR 74 (316)
T ss_dssp SSEEEEETTSCCCEEEECSC---SSEEEEEEETTTTEEEEEETT--------TTEEEEEEC------------CEEEECS
T ss_pred CeEEEEECCCcceEehhcCC---CceEEEEEEeCCCEEEEEECC--------CCcEEEEECCCCCCCcc----cEEEEeC
Confidence 4677778777665443 222 222344444 5789998433 34788999876 22 2322211
Q ss_pred CCCCccccceEEEE--ECCEEEEEcccCCCCceeEEEeCCCCCeEecCC-CCCCCCCCceEEEe-eCCeEEEEeCCC-Cc
Q 016368 237 KDGRFSREAVEAVG--FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPE-GMHAGWNGPAASTM-NEEELYVVNEGK-GR 311 (390)
Q Consensus 237 ~~~~~~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~-~~g~lyv~gg~~-~~ 311 (390)
.... ..+.++ .++++|+. ......+.++|+....-+.+.. ....+ ..+++. .+|.||+..... +.
T Consensus 75 ~~~~----p~glavd~~~~~ly~~---d~~~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~~~~ 144 (316)
T 1ijq_A 75 DIQA----PDGLAVDWIHSNIYWT---DSVLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGTPAK 144 (316)
T ss_dssp SCSC----CCEEEEETTTTEEEEE---ETTTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSSSCE
T ss_pred CCCC----cCEEEEeecCCeEEEE---ECCCCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCCCCe
Confidence 1111 134444 47899998 2245668889987654333221 11111 233431 378999988544 68
Q ss_pred EEEEECCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 312 LSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 312 v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
|+++++....=+.+... ......++++- +++||+.-.....|.++|....
T Consensus 145 I~~~~~dG~~~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 145 IKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp EEEEETTSCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEcCCCCCeEEEEEC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 99999876544333221 22334566665 7899998555678999998754
No 171
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.66 E-value=0.24 Score=48.31 Aligned_cols=176 Identities=14% Similarity=-0.012 Sum_probs=90.4
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCCCccCeEEEEEC--CCCccccccEEcccCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GG-VVYVASGVGAHYRGDVARSMKKWDL--KSDREDWKWEKKAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~--~t~~~~~~W~~~~~~~~~ 239 (390)
+.+.++|..+++-...-+. ...-|.++.. ++ .||+.+. + ..+.+||+ .+.+ .+..++..
T Consensus 159 ~~V~v~D~~t~~~~~~i~~--g~~~~~v~~spdg~~l~v~~~-d--------~~V~v~D~~~~t~~------~~~~i~~g 221 (543)
T 1nir_A 159 GQIALVDGDSKKIVKVIDT--GYAVHISRMSASGRYLLVIGR-D--------ARIDMIDLWAKEPT------KVAEIKIG 221 (543)
T ss_dssp TEEEEEETTTCCEEEEEEC--STTEEEEEECTTSCEEEEEET-T--------SEEEEEETTSSSCE------EEEEEECC
T ss_pred CeEEEEECCCceEEEEEec--CcccceEEECCCCCEEEEECC-C--------CeEEEEECcCCCCc------EEEEEecC
Confidence 5788999988865322111 1113444333 44 5666642 1 47999999 5554 33333322
Q ss_pred CccccceEEEEE-----CCE-EEEEcccCCCCceeEEEeCCCCCeEe-cCCC-CCC------CC-CCceEEEee-CCeEE
Q 016368 240 RFSREAVEAVGF-----KGN-LCMVNLKGNGAKDGAIYNVELDKWKE-MPEG-MHA------GW-NGPAASTMN-EEELY 303 (390)
Q Consensus 240 ~~~r~~~~~~~~-----~g~-lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~-~~~------~~-~~~~~~~~~-~g~ly 303 (390)
.. ...+++. +|+ +|+.+ .....+.++|..+.+-.. ++.. +.. +. ...+++... ++.+|
T Consensus 222 ~~---p~~va~sp~~~~dg~~l~v~~---~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 222 IE---ARSVESSKFKGYEDRYTIAGA---YWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp SE---EEEEEECCSTTCTTTEEEEEE---EESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred CC---cceEEeCCCcCCCCCEEEEEE---ccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 22 1334443 565 55541 124557789987764322 2210 100 11 111222213 45666
Q ss_pred EEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCE-EEEEeeCCceEEEEEcCCC
Q 016368 304 VVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR-VCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 304 v~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~-l~i~g~~~~~v~~~d~~~~ 362 (390)
+....++.++.+|..+..-..+..++..+..+.+... +|+ +|+.+...+.|.++|+.+.
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred EEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 6666778999999987543222233333333444443 455 5555444668888998765
No 172
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.63 E-value=1.5 Score=41.11 Aligned_cols=168 Identities=6% Similarity=-0.136 Sum_probs=84.0
Q ss_pred CCcEEEeCCCCceec--CCCCCCCCcc-eEEEE-EC---CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccC
Q 016368 164 ASPLAFNPQSNTWFF--GPQLSIPRRW-CAMGS-VG---GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQL 236 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~--~~~~~~~r~~-~~~~~-~~---~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~ 236 (390)
..+++|+..+.+... +..+...... .+++. -+ +++++.|+.+. .+.+||..+.. -...-..
T Consensus 171 g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~--------~i~vwd~~~~~----~~~~~~~ 238 (450)
T 2vdu_B 171 GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE--------HIKISHYPQCF----IVDKWLF 238 (450)
T ss_dssp SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS--------CEEEEEESCTT----CEEEECC
T ss_pred CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC--------cEEEEECCCCc----eeeeeec
Confidence 467888877665432 1112111111 22222 25 77777777653 78889988776 3322111
Q ss_pred CCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCC------C-----------------CCCCCCce
Q 016368 237 KDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEG------M-----------------HAGWNGPA 293 (390)
Q Consensus 237 ~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~------~-----------------~~~~~~~~ 293 (390)
..... ..+++..++++++.|+ ....+.+||..+.+-...-.. . ........
T Consensus 239 ~h~~~---v~~~~~sd~~~l~s~~---~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 239 GHKHF---VSSICCGKDYLLLSAG---GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp CCSSC---EEEEEECSTTEEEEEE---SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred CCCCc---eEEEEECCCCEEEEEe---CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 11111 1222222676666642 234577899887753221100 0 00111112
Q ss_pred EEEeeCCeEEEEeC-CCCcEEEEEC--C-CCceEEcccccccccceeEEEECCEEEEEee
Q 016368 294 ASTMNEEELYVVNE-GKGRLSKYDA--D-HDWWDEVIELAELKGAEKITAARGRVCAVCE 349 (390)
Q Consensus 294 ~~~~~~g~lyv~gg-~~~~v~~yd~--~-~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~ 349 (390)
++...++..+++++ .++.+.+||. . ...+..+..++.......++...+.+++...
T Consensus 313 i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~~~ 372 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLD 372 (450)
T ss_dssp EEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTEEEEEEC
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCcEEEEEe
Confidence 22223455555555 6788999988 3 3456666655544333455666677777643
No 173
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.62 E-value=0.23 Score=43.81 Aligned_cols=150 Identities=12% Similarity=0.124 Sum_probs=81.0
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccC---CCCCccccceEEEE-EC-CEEEEEcccCCCCceeE
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQL---KDGRFSREAVEAVG-FK-GNLCMVNLKGNGAKDGA 269 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~---~~~~~~r~~~~~~~-~~-g~lyv~gg~g~~~~~~~ 269 (390)
++.||+.+..... .......+.+||+.++. ++.+... ..... ..+++. -+ |++|+.. ....+.
T Consensus 28 ~g~l~~~~~~~~~-~~~~~~~i~~~d~~~g~----~~~~~~~~~~~~~~~---~~~i~~~~~~g~l~v~~----~~~~l~ 95 (314)
T 1pjx_A 28 NGDFYIVAPEVEV-NGKPAGEILRIDLKTGK----KTVICKPEVNGYGGI---PAGCQCDRDANQLFVAD----MRLGLL 95 (314)
T ss_dssp TSCEEEEETTCEE-TTEECCEEEEECTTTCC----EEEEECCEETTEECC---EEEEEECSSSSEEEEEE----TTTEEE
T ss_pred CCCEEEEEecccc-CCCCCCEEEEEeCCCCc----EEEEEecccCCCCCC---CceEEEecCCCcEEEEE----CCCCEE
Confidence 5778887211000 00122478999998888 7655320 00011 133443 25 7899884 233678
Q ss_pred EEeCCCCCeEec-CCCCCC--CCCCceEEEeeCCeEEEEeCCC---------------CcEEEEECCCCceEEccccccc
Q 016368 270 IYNVELDKWKEM-PEGMHA--GWNGPAASTMNEEELYVVNEGK---------------GRLSKYDADHDWWDEVIELAEL 331 (390)
Q Consensus 270 ~yd~~~~~W~~~-~~~~~~--~~~~~~~~~~~~g~lyv~gg~~---------------~~v~~yd~~~~~W~~i~~~p~~ 331 (390)
+||++ ++...+ ...... ......++...+|++|+..... +.+++||+. .+...+.. ..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~ 171 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AF 171 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EE
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CC
Confidence 89998 777655 321111 1112334433578999877543 579999987 55554321 11
Q ss_pred ccceeEEEE-----CC-EEEEEeeCCceEEEEEcC
Q 016368 332 KGAEKITAA-----RG-RVCAVCENGERIMVVDVL 360 (390)
Q Consensus 332 r~~~~~~~~-----~g-~l~i~g~~~~~v~~~d~~ 360 (390)
....+++.. ++ .||+.....+.+++||+.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 122334433 33 477765556688888865
No 174
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.61 E-value=0.23 Score=46.59 Aligned_cols=188 Identities=6% Similarity=-0.085 Sum_probs=95.8
Q ss_pred eEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCC-CCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 148 NLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLS-IPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 148 ~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
.+++.|+.. ..|.+||..+++-..+-.+. ....-.+++.. ++.+++.|+.+. .+.+||.+++
T Consensus 133 ~~lasGs~d-------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~--------~v~iwd~~~~ 197 (435)
T 4e54_B 133 STVAVGSKG-------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG--------TTRLQDFKGN 197 (435)
T ss_dssp TCEEEEETT-------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS--------CEEEEETTSC
T ss_pred CEEEEEeCC-------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC--------EEEEeeccCC
Confidence 455555432 46888998776543322211 11111233332 456666776654 6788999887
Q ss_pred ccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeC-CeE
Q 016368 225 REDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNE-EEL 302 (390)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-g~l 302 (390)
. -+.+......... ..++.. -++++++.|+ ....+.++|...+.-..+.. ......+++...+ ..+
T Consensus 198 ~----~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~---~dg~i~~wd~~~~~~~~~~~---h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 198 I----LRVFASSDTINIW--FCSLDVSASSRMVVTGD---NVGNVILLNMDGKELWNLRM---HKKKVTHVALNPCCDWF 265 (435)
T ss_dssp E----EEEEECCSSCSCC--CCCEEEETTTTEEEEEC---SSSBEEEEESSSCBCCCSBC---CSSCEEEEEECTTCSSE
T ss_pred c----eeEEeccCCCCcc--EEEEEECCCCCEEEEEe---CCCcEeeeccCcceeEEEec---ccceEEeeeecCCCceE
Confidence 6 5444332211110 122222 3667777642 23456788886543211111 1111112222113 457
Q ss_pred EEEeCCCCcEEEEECCCCceEE-cccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 303 YVVNEGKGRLSKYDADHDWWDE-VIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 303 yv~gg~~~~v~~yd~~~~~W~~-i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.|+.++.+..||..+..-.. +............+.+ +|..++.|+.++.|.+||+.+.
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 7788888999999987644221 1111112222222222 5666777777788999998763
No 175
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.56 E-value=0.21 Score=46.79 Aligned_cols=147 Identities=8% Similarity=-0.026 Sum_probs=84.0
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccC-CCCCccccceEEEEE--CCEEEEEcccCCCCceeEEE
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQL-KDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIY 271 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~-~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~y 271 (390)
++.+++.|+.++ .+.+||..+.. -..+..+ ..... -.+++.. ++.+++.|+ ....+.++
T Consensus 131 ~~~~lasGs~dg--------~i~lWd~~~~~----~~~~~~~~gH~~~---V~~l~f~p~~~~~l~s~s---~D~~v~iw 192 (435)
T 4e54_B 131 HPSTVAVGSKGG--------DIMLWNFGIKD----KPTFIKGIGAGGS---ITGLKFNPLNTNQFYASS---MEGTTRLQ 192 (435)
T ss_dssp CTTCEEEEETTS--------CEEEECSSCCS----CCEEECCCSSSCC---CCEEEECSSCTTEEEEEC---SSSCEEEE
T ss_pred CCCEEEEEeCCC--------EEEEEECCCCC----ceeEEEccCCCCC---EEEEEEeCCCCCEEEEEe---CCCEEEEe
Confidence 456777777665 68889988776 3333222 21111 1334432 455555531 23457789
Q ss_pred eCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE---CCEEEEEe
Q 016368 272 NVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA---RGRVCAVC 348 (390)
Q Consensus 272 d~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~---~g~l~i~g 348 (390)
|.+++........-.......++....++.+++.|+.++.+..||..+.. +..+.........+.+ +..+++.|
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEe
Confidence 99887665543311122222233333688999999999999999987543 3333333333333333 34467777
Q ss_pred eCCceEEEEEcCCC
Q 016368 349 ENGERIMVVDVLAS 362 (390)
Q Consensus 349 ~~~~~v~~~d~~~~ 362 (390)
+.+..|.+||+.+.
T Consensus 270 s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 270 SVDQTVKIWDLRQV 283 (435)
T ss_dssp ETTSBCCEEETTTC
T ss_pred cCcceeeEEecccc
Confidence 77788999998764
No 176
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.56 E-value=0.21 Score=44.81 Aligned_cols=178 Identities=10% Similarity=0.033 Sum_probs=89.1
Q ss_pred CCcEEEeCCCCc--eecCCCCCC--CCcceEEEE-----ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcc
Q 016368 164 ASPLAFNPQSNT--WFFGPQLSI--PRRWCAMGS-----VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKA 234 (390)
Q Consensus 164 ~~~~~~dp~t~~--W~~~~~~~~--~r~~~~~~~-----~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~ 234 (390)
..+.+||..+.+ ...+..... .+.-.+.+. -++.+++.|+.+. .+.+||..+.. -....
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~--------~i~i~d~~~~~----~~~~~ 206 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG--------DIKLFDLRNMA----LRWET 206 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS--------EEEEEETTTTE----EEEEE
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC--------eEEEEECccCc----eeeec
Confidence 468889988764 222222211 112222221 3566777766543 78899998876 32222
Q ss_pred cCCCCCccccceEEEEE----CCEEEEEcccCCCCceeEEEeCCCCC----eEecCCCCCCCCCCceEEEeeCCe-EEEE
Q 016368 235 QLKDGRFSREAVEAVGF----KGNLCMVNLKGNGAKDGAIYNVELDK----WKEMPEGMHAGWNGPAASTMNEEE-LYVV 305 (390)
Q Consensus 235 ~~~~~~~~r~~~~~~~~----~g~lyv~gg~g~~~~~~~~yd~~~~~----W~~~~~~~~~~~~~~~~~~~~~g~-lyv~ 305 (390)
..... ..+++.. ++..++.|+ ....+.+||..+.+ +..... .........+....++. +++.
T Consensus 207 ~~~~~-----v~~~~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 207 NIKNG-----VCSLEFDRKDISMNKLVATS---LEGKFHVFDMRTQHPTKGFASVSE-KAHKSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp ECSSC-----EEEEEESCSSSSCCEEEEEE---STTEEEEEEEEEEETTTEEEEEEE-ECCSSCEEEEEEETTEEEEEEE
T ss_pred CCCCc-----eEEEEcCCCCCCCCEEEEEC---CCCeEEEEeCcCCCcccceeeecc-CCCcCCEEEEEECCCCCcEEEE
Confidence 22111 1333333 455555532 23346677775431 110000 01111112233224566 7888
Q ss_pred eCCCCcEEEEECCCCc-----------------eEEcccccccccceeEEEE--CCEEEE-EeeCCceEEEEEcCCC
Q 016368 306 NEGKGRLSKYDADHDW-----------------WDEVIELAELKGAEKITAA--RGRVCA-VCENGERIMVVDVLAS 362 (390)
Q Consensus 306 gg~~~~v~~yd~~~~~-----------------W~~i~~~p~~r~~~~~~~~--~g~l~i-~g~~~~~v~~~d~~~~ 362 (390)
|+.++.+..||..+.. +..+..+...........+ +++.++ -|+.+..+.+||+.+.
T Consensus 278 ~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 278 AGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred EeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 8888988888876432 2333333333333333333 455554 5677789999998764
No 177
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.51 E-value=0.18 Score=50.84 Aligned_cols=172 Identities=12% Similarity=0.030 Sum_probs=94.7
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCC----CccccccEEcc--c
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKS----DREDWKWEKKA--Q 235 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t----~~~~~~W~~~~--~ 235 (390)
..+.++++.+.....+.+.. ..-+++++. ++.||+.- .....+.++++.+ .. -..+. .
T Consensus 386 ~~I~~id~~~~~~~~~~~~~--~~p~gla~d~~~~~Ly~sD--------~~~~~I~~~~~~g~~~~~~----~~~~i~~~ 451 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNL--RNVVALDTEVASNRIYWSD--------LSQRMICSTQLDRAHGVSS----YDTVISRD 451 (699)
T ss_dssp TC-CEECTTSCCEECCSCCC--TTCCCCEEETTTTEEEECC--------TTTTSBEEEESCCCCC-CC----CCCBCCSC
T ss_pred cceEEEeCCCCcceeeeccC--cceEEEccccccCeEEEEe--------cCCCeEEEEecCCCCCCcc----eEEEEeCC
Confidence 46777888777666543221 122334443 67899863 2334778888875 11 11111 1
Q ss_pred CCCCCccccceEEEE--ECCEEEEEcccCCCCceeEEEeCCCCCeEecCC-CCCCCCCCceEEE-eeCCeEEEEeCCC-C
Q 016368 236 LKDGRFSREAVEAVG--FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPE-GMHAGWNGPAAST-MNEEELYVVNEGK-G 310 (390)
Q Consensus 236 ~~~~~~~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~~-~~~g~lyv~gg~~-~ 310 (390)
+..+ .++++ .+++||+. ......+.++|+....-+.+.. .+..+ ..+++ ..+|.||+..... +
T Consensus 452 ~~~P------~glavD~~~g~LY~t---D~~~~~I~v~d~dg~~~~~l~~~~~~~P---~giavDp~~g~ly~td~~~~~ 519 (699)
T 1n7d_A 452 IQAP------DGLAVDWIHSNIYWT---DSVLGTVSVADTKGVKRKTLFREQGSKP---RAIVVDPVHGFMYWTDWGTPA 519 (699)
T ss_dssp C--C------CCEECCCSSSBCEEC---CTTTSCEEEEBSSSCCEEEECCCSSCCC---CCEECCSSSSCCEECCCSSSC
T ss_pred CCCc------ceEEEEeeCCcEEEE---eccCCeEEEEecCCCceEEEEeCCCCCc---ceEEEccCCCcEEEcccCCCC
Confidence 1111 23333 47889998 2334567889987665444432 11111 23332 1368899877433 6
Q ss_pred cEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 311 RLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 311 ~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.|+++++....-+.+... ......++++- +++||+.-.....|.++|+...
T Consensus 520 ~I~~~~~dG~~~~~l~~~-~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 520 KIKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CEEBCCSSSCCCCEESCS-SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred eEEEEeCCCCCeeEEEeC-CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 899998875443333211 12233456554 6889988555668899988654
No 178
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.50 E-value=0.75 Score=45.08 Aligned_cols=121 Identities=13% Similarity=0.194 Sum_probs=72.4
Q ss_pred EEEEECCEEEEEeccCCCCCCCccCeEEEEEC-CCCccccccEEcccCCCCCc-----cccceEEEEECCEEEEEcccCC
Q 016368 190 AMGSVGGVVYVASGVGAHYRGDVARSMKKWDL-KSDREDWKWEKKAQLKDGRF-----SREAVEAVGFKGNLCMVNLKGN 263 (390)
Q Consensus 190 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~-~t~~~~~~W~~~~~~~~~~~-----~r~~~~~~~~~g~lyv~gg~g~ 263 (390)
+-++.++.||+.... ...+.++|. ++++. .|+.-........ .....+.++.++++|+..
T Consensus 57 ~P~v~~g~vyv~~~~--------~~~v~AlD~~~tG~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~---- 122 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF--------PNNTYALNLNDPGKI--VWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ---- 122 (571)
T ss_dssp CCEEETTEEEEECST--------TTCEEEEETTCTTSE--EEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC----
T ss_pred ccEEECCEEEEEeCC--------CCEEEEEeCCCCccE--EEEEcCCCCccccccccccccccccEEECCEEEEEe----
Confidence 345679999997642 236889999 77763 4886443221100 000123456799999874
Q ss_pred CCceeEEEeCCCC--CeEecCCCCCCC-CCCceEEEeeCCeEEEEeCC-----CCcEEEEECCCCc--eEEc
Q 016368 264 GAKDGAIYNVELD--KWKEMPEGMHAG-WNGPAASTMNEEELYVVNEG-----KGRLSKYDADHDW--WDEV 325 (390)
Q Consensus 264 ~~~~~~~yd~~~~--~W~~~~~~~~~~-~~~~~~~~~~~g~lyv~gg~-----~~~v~~yd~~~~~--W~~i 325 (390)
......++|.+++ .|+.-....... ....+.++ .+|.+|+.... ++.++.||.++.+ |+.-
T Consensus 123 ~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 123 ANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 3345788998876 588643211111 11222333 68888876542 5789999998754 7653
No 179
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.49 E-value=1.5 Score=43.54 Aligned_cols=174 Identities=11% Similarity=0.085 Sum_probs=93.4
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
.++...+..+..-..+-+++.-+.-.++++. +++||+.-- ....+.++++.... .+.+.......
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~--------~~~~I~r~~~~g~~----~~~v~~~g~~~- 81 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI--------SLKTISRAFMNGSA----LEHVVEFGLDY- 81 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET--------TTTEEEEEETTSCS----CEEEECSSCSC-
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC--------CCCeEEEEECCCCC----cEEEEeCCCCC-
Confidence 3566666665433322222222233344444 689999743 23478889887766 56554332211
Q ss_pred cccceEEEE--ECCEEEEEcccCCCCceeEEEeCCCCCeEecC-CCCCCCCCCceEEE-eeCCeEEEEe-CCCCcEEEEE
Q 016368 242 SREAVEAVG--FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMP-EGMHAGWNGPAAST-MNEEELYVVN-EGKGRLSKYD 316 (390)
Q Consensus 242 ~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~-~~~g~lyv~g-g~~~~v~~yd 316 (390)
..++++ .+++||+. ..+...++++++....=+.+. ..+..+ ..+++ ..+|.||+.. |....|++++
T Consensus 82 ---P~GlAvD~~~~~LY~t---D~~~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g~~~~I~r~~ 152 (628)
T 4a0p_A 82 ---PEGMAVDWLGKNLYWA---DTGTNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWGGKPKIDRAA 152 (628)
T ss_dssp ---CCEEEEETTTTEEEEE---ETTTTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred ---cceEEEEeCCCEEEEE---ECCCCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCCCCCEEEEEe
Confidence 134454 47899998 334567889998755323322 112111 23443 1368999987 3356888888
Q ss_pred CCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcCC
Q 016368 317 ADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 317 ~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~ 361 (390)
+....-..+.. ......+++.- +++||+.=...+.|..+|+..
T Consensus 153 ~dG~~~~~l~~--~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 153 MDGSERTTLVP--NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp TTSCSCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCceEEEEC--CCCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 87655444332 11222334433 466666543344566666544
No 180
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.44 E-value=0.73 Score=42.42 Aligned_cols=146 Identities=8% Similarity=0.119 Sum_probs=79.2
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
+++.++.|+.+. .+.+||..+.. -...-.-.... -.+++.. ++...+.|+ ....+.+||.
T Consensus 134 dg~~l~s~~~d~--------~i~iwd~~~~~----~~~~~~~h~~~----v~~~~~~p~~~~l~s~s---~d~~v~iwd~ 194 (393)
T 1erj_A 134 DGKFLATGAEDR--------LIRIWDIENRK----IVMILQGHEQD----IYSLDYFPSGDKLVSGS---GDRTVRIWDL 194 (393)
T ss_dssp TSSEEEEEETTS--------CEEEEETTTTE----EEEEECCCSSC----EEEEEECTTSSEEEEEE---TTSEEEEEET
T ss_pred CCCEEEEEcCCC--------eEEEEECCCCc----EEEEEccCCCC----EEEEEEcCCCCEEEEec---CCCcEEEEEC
Confidence 567777777654 78899998776 32221111111 1233332 455444431 2345778998
Q ss_pred CCCCeEecCCCCCCCCCCceEEEee-CCeEEEEeCCCCcEEEEECCCCceEEcccc-----cccccc-eeEEEE-CCEEE
Q 016368 274 ELDKWKEMPEGMHAGWNGPAASTMN-EEELYVVNEGKGRLSKYDADHDWWDEVIEL-----AELKGA-EKITAA-RGRVC 345 (390)
Q Consensus 274 ~~~~W~~~~~~~~~~~~~~~~~~~~-~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~-----p~~r~~-~~~~~~-~g~l~ 345 (390)
.+.+-...-. . ......++... ++++++.|+.++.+..||..+..-...... ...... .++... +|+.+
T Consensus 195 ~~~~~~~~~~-~--~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l 271 (393)
T 1erj_A 195 RTGQCSLTLS-I--EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSV 271 (393)
T ss_dssp TTTEEEEEEE-C--SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEE
T ss_pred CCCeeEEEEE-c--CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEE
Confidence 8775433211 1 11111222212 788999999999999999987654322110 111122 223333 67777
Q ss_pred EEeeCCceEEEEEcCCC
Q 016368 346 AVCENGERIMVVDVLAS 362 (390)
Q Consensus 346 i~g~~~~~v~~~d~~~~ 362 (390)
+.|+.+..|.+||+.+.
T Consensus 272 ~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 272 VSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp EEEETTSEEEEEEC---
T ss_pred EEEeCCCEEEEEECCCC
Confidence 77777889999998753
No 181
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.41 E-value=0.34 Score=44.18 Aligned_cols=144 Identities=10% Similarity=-0.006 Sum_probs=83.5
Q ss_pred EEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccC-CCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeC
Q 016368 197 VVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQL-KDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 197 ~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~-~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
++++.|+.+. .+.+||..+.. ....... ..... -.+++.. ++.+++.++ ....+.+||.
T Consensus 87 ~~l~s~~~dg--------~i~iwd~~~~~----~~~~~~~~~h~~~---v~~~~~~~~~~~~l~s~~---~d~~i~iwd~ 148 (383)
T 3ei3_B 87 TTVAVGSKGG--------DIILWDYDVQN----KTSFIQGMGPGDA---ITGMKFNQFNTNQLFVSS---IRGATTLRDF 148 (383)
T ss_dssp TEEEEEEBTS--------CEEEEETTSTT----CEEEECCCSTTCB---EEEEEEETTEEEEEEEEE---TTTEEEEEET
T ss_pred CEEEEEcCCC--------eEEEEeCCCcc----cceeeecCCcCCc---eeEEEeCCCCCCEEEEEe---CCCEEEEEEC
Confidence 5677776654 78899999887 5554432 11111 1334443 335555531 2345778999
Q ss_pred CCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEccccccccccee-EEEE-CCE-EEEEeeC
Q 016368 274 ELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEK-ITAA-RGR-VCAVCEN 350 (390)
Q Consensus 274 ~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~-~~~~-~g~-l~i~g~~ 350 (390)
.+.....+...........+++...++.+++.|+.++.+..||.....-..+ ........ +... ++. +++.|+.
T Consensus 149 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 149 SGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKE---KLHKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp TSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEE---ECSSSCEEEEEECSSCTTEEEEEET
T ss_pred CCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEe---ccCCCcEEEEEECCCCCCEEEEEeC
Confidence 8766655543111111122333236788888999999999999864432222 22222222 3333 454 7777777
Q ss_pred CceEEEEEcCC
Q 016368 351 GERIMVVDVLA 361 (390)
Q Consensus 351 ~~~v~~~d~~~ 361 (390)
+..+.+||+.+
T Consensus 226 d~~i~iwd~~~ 236 (383)
T 3ei3_B 226 DATVKLWDLRN 236 (383)
T ss_dssp TSEEEEEEGGG
T ss_pred CCEEEEEeCCC
Confidence 88999999986
No 182
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.40 E-value=0.13 Score=46.17 Aligned_cols=146 Identities=15% Similarity=0.078 Sum_probs=76.3
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCE-EEEEcccCCCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGN-LCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~-lyv~gg~g~~~~~~~~yd 272 (390)
++++|+.++.+. .+.++|+.+++ ....-..+.... ....+. -+|+ +|+.+ .....+.+||
T Consensus 10 ~~~~~v~~~~~~--------~v~~~d~~~~~----~~~~~~~~~~~~---~~~~~~s~dg~~~~v~~---~~~~~i~~~d 71 (349)
T 1jmx_B 10 GHEYMIVTNYPN--------NLHVVDVASDT----VYKSCVMPDKFG---PGTAMMAPDNRTAYVLN---NHYGDIYGID 71 (349)
T ss_dssp TCEEEEEEETTT--------EEEEEETTTTE----EEEEEECSSCCS---SCEEEECTTSSEEEEEE---TTTTEEEEEE
T ss_pred CCEEEEEeCCCC--------eEEEEECCCCc----EEEEEecCCCCC---CceeEECCCCCEEEEEe---CCCCcEEEEe
Confidence 577888776543 78999998877 433222222101 123333 3554 77763 2345678999
Q ss_pred CCCCCeEecCCCCCC-----CCCCceEEEeeCCeEEEEeCC------------CCcEEEEECCCCceEE-cccccccccc
Q 016368 273 VELDKWKEMPEGMHA-----GWNGPAASTMNEEELYVVNEG------------KGRLSKYDADHDWWDE-VIELAELKGA 334 (390)
Q Consensus 273 ~~~~~W~~~~~~~~~-----~~~~~~~~~~~~g~lyv~gg~------------~~~v~~yd~~~~~W~~-i~~~p~~r~~ 334 (390)
+.+.+-...-. .+. ......++...+|+.++++.. .+.+.+||.++.+-.+ +.....+...
T Consensus 72 ~~t~~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (349)
T 1jmx_B 72 LDTCKNTFHAN-LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV 150 (349)
T ss_dssp TTTTEEEEEEE-SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC
T ss_pred CCCCcEEEEEE-cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc
Confidence 98775432211 111 111223333246654444432 3689999988743221 1222222333
Q ss_pred eeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 335 EKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 335 ~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.++... +|++|+. +.+++++|+.+.
T Consensus 151 ~~~~~s~dg~l~~~---~~~i~~~d~~~~ 176 (349)
T 1jmx_B 151 YLMRAADDGSLYVA---GPDIYKMDVKTG 176 (349)
T ss_dssp CCEEECTTSCEEEE---SSSEEEECTTTC
T ss_pred cceeECCCCcEEEc---cCcEEEEeCCCC
Confidence 334443 6777764 234889998765
No 183
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.37 E-value=1.3 Score=38.73 Aligned_cols=190 Identities=9% Similarity=0.092 Sum_probs=93.8
Q ss_pred eecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcce-EEEEE-CCEEEEEeccCCCCCCCccCeEEEEEC
Q 016368 144 GVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWC-AMGSV-GGVVYVASGVGAHYRGDVARSMKKWDL 221 (390)
Q Consensus 144 ~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~ 221 (390)
...++++.+| . . +.+.+||..+++...+-.+......- +++.. +++.++.|+.+. .+.+||.
T Consensus 33 WS~~~~lAvg-~-D------~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg--------~v~iw~~ 96 (318)
T 4ggc_A 33 WSSGNVLAVA-L-D------NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDV 96 (318)
T ss_dssp ECTTSEEEEE-E-T------TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------EEEEEET
T ss_pred ECCCCEEEEE-e-C------CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC--------cEEEeec
Confidence 3455665554 2 1 46899999998765543332222222 22222 567777777664 7889999
Q ss_pred CCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe
Q 016368 222 KSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE 301 (390)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~ 301 (390)
++++ -......... .......++.+.+.|+ .......++..+........ ..............++.
T Consensus 97 ~~~~----~~~~~~~h~~-----~~~~~~~~~~~l~s~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 163 (318)
T 4ggc_A 97 QQQK----RLRNMTSHSA-----RVGSLSWNSYILSSGS---RSGHIHHHDVRVAEHHVATL-SGHSQEVCGLRWAPDGR 163 (318)
T ss_dssp TTTE----EEEEEECCSS-----CEEEEEEETTEEEEEE---TTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSS
T ss_pred CCce----eEEEecCccc-----eEEEeecCCCEEEEEe---cCCceEeeecCCCceeEEEE-cCccCceEEEEEcCCCC
Confidence 8876 3222211111 1223334555555531 12234455555443322111 11111112222235778
Q ss_pred EEEEeCCCCcEEEEECCCCceE--Ecccccccccc-eeEEEE--CCEEEEEe-e-CCceEEEEEcCCC
Q 016368 302 LYVVNEGKGRLSKYDADHDWWD--EVIELAELKGA-EKITAA--RGRVCAVC-E-NGERIMVVDVLAS 362 (390)
Q Consensus 302 lyv~gg~~~~v~~yd~~~~~W~--~i~~~p~~r~~-~~~~~~--~g~l~i~g-~-~~~~v~~~d~~~~ 362 (390)
.++.++.++.+..||..+.+-. ........... ..+... ++.+..+. + ....+.++|....
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~ 231 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 231 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC
T ss_pred EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccc
Confidence 8888888999999998864321 11111111111 122222 34444332 2 2446778887665
No 184
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.30 E-value=0.58 Score=41.36 Aligned_cols=100 Identities=11% Similarity=0.021 Sum_probs=48.5
Q ss_pred CCcEEEeCCCCceecCCCCCCC----CcceEEEEE-CC-EEEEEeccCCCCCCC---ccCeEEEEECCCCccccccEEcc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIP----RRWCAMGSV-GG-VVYVASGVGAHYRGD---VARSMKKWDLKSDREDWKWEKKA 234 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~----r~~~~~~~~-~~-~lyv~GG~~~~~~~~---~~~~~~~yd~~t~~~~~~W~~~~ 234 (390)
..+++||+.+++-...-+.+.+ ..-..++.. ++ .||+........... ....+.+||..+.+ ....-
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~----~~~~~ 131 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS----RRKAF 131 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE----EEEEE
T ss_pred CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc----EEEEE
Confidence 5799999988765331111110 011223333 34 677764221000000 23689999998876 33222
Q ss_pred cCCCCCccccceEEEE-ECCE-EEEEcccCCCCceeEEEeCCCCCe
Q 016368 235 QLKDGRFSREAVEAVG-FKGN-LCMVNLKGNGAKDGAIYNVELDKW 278 (390)
Q Consensus 235 ~~~~~~~~r~~~~~~~-~~g~-lyv~gg~g~~~~~~~~yd~~~~~W 278 (390)
...... ..++. -+|+ +|+. ...+.+||+.+.+-
T Consensus 132 ~~~~~~-----~~~~~s~dg~~l~~~------~~~i~~~d~~~~~~ 166 (337)
T 1pby_B 132 EAPRQI-----TMLAWARDGSKLYGL------GRDLHVMDPEAGTL 166 (337)
T ss_dssp ECCSSC-----CCEEECTTSSCEEEE------SSSEEEEETTTTEE
T ss_pred eCCCCc-----ceeEECCCCCEEEEe------CCeEEEEECCCCcE
Confidence 222111 22222 3555 5555 24577888877654
No 185
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.29 E-value=2.6 Score=41.77 Aligned_cols=173 Identities=8% Similarity=-0.020 Sum_probs=104.2
Q ss_pred CCCcEEEeCCCCceecCCCCCCCCcceEEEE--ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcc--cCCC
Q 016368 163 LASPLAFNPQSNTWFFGPQLSIPRRWCAMGS--VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKA--QLKD 238 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~--~~~~ 238 (390)
.+.++++++.....+.+..... ..-.++++ .+++||+.-. ....++++++.... =+.+. .+..
T Consensus 58 ~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~~~~LY~tD~--------~~~~I~v~~~dG~~----~~~l~~~~l~~ 124 (628)
T 4a0p_A 58 LKTISRAFMNGSALEHVVEFGL-DYPEGMAVDWLGKNLYWADT--------GTNRIEVSKLDGQH----RQVLVWKDLDS 124 (628)
T ss_dssp TTEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTTEEEEEET--------TTTEEEEEETTSTT----CEEEECSSCCC
T ss_pred CCeEEEEECCCCCcEEEEeCCC-CCcceEEEEeCCCEEEEEEC--------CCCEEEEEecCCCc----EEEEEeCCCCC
Confidence 3578888887655444322111 11123444 3789999732 33589999987654 23332 2222
Q ss_pred CCccccceEEEEE--CCEEEEEcccCCC-CceeEEEeCCCCCeEecCCCCCCCCCCceEEEe-eCCeEEEEeCCCCcEEE
Q 016368 239 GRFSREAVEAVGF--KGNLCMVNLKGNG-AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTM-NEEELYVVNEGKGRLSK 314 (390)
Q Consensus 239 ~~~~r~~~~~~~~--~g~lyv~gg~g~~-~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~g~lyv~gg~~~~v~~ 314 (390)
..++++. +|.||+.- .+ ...++++++....-+.+...+..+ .++++. .+++||+.....+.|++
T Consensus 125 ------P~~iavdp~~G~lY~tD---~g~~~~I~r~~~dG~~~~~l~~~~~~P---~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 125 ------PRALALDPAEGFMYWTE---WGGKPKIDRAAMDGSERTTLVPNVGRA---NGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp ------EEEEEEETTTTEEEEEE---CSSSCEEEEEETTSCSCEEEECSCSSE---EEEEEETTTTEEEEEETTTTEEEE
T ss_pred ------cccEEEccCCCeEEEeC---CCCCCEEEEEeCCCCceEEEECCCCCc---ceEEEccccCEEEEEECCCCEEEE
Confidence 1445554 78999982 12 456778888766544433212111 133331 26899999988889999
Q ss_pred EECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 315 YDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 315 yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+|.....=+.+.. .....+++++.++.||+.-...+.|+.+|..+.
T Consensus 193 ~d~dG~~~~v~~~--~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 193 SNMLGLNREVIAD--DLPHPFGLTQYQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EETTSCSCEEEEE--CCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EcCCCCceEEeec--cCCCceEEEEECCEEEEecCCCCEEEEEECCCC
Confidence 9987543233321 233456888889999998555678999997654
No 186
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.29 E-value=0.72 Score=40.52 Aligned_cols=149 Identities=8% Similarity=0.027 Sum_probs=78.6
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE---CCEEEEEcccCCCCceeEEE
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF---KGNLCMVNLKGNGAKDGAIY 271 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~---~g~lyv~gg~g~~~~~~~~y 271 (390)
+++.++.|+.+. .+.+||..++. .+.+..+...... -.+++.. ++.+.+.|+ ....+.++
T Consensus 20 ~g~~las~s~D~--------~v~iw~~~~~~----~~~~~~l~gH~~~--V~~v~~s~~~~g~~l~s~s---~D~~v~iW 82 (297)
T 2pm7_B 20 YGKRMATCSSDK--------TIKIFEVEGET----HKLIDTLTGHEGP--VWRVDWAHPKFGTILASCS---YDGKVMIW 82 (297)
T ss_dssp TSSEEEEEETTS--------CEEEEEBCSSC----BCCCEEECCCSSC--EEEEEECCGGGCSEEEEEE---TTTEEEEE
T ss_pred CCCEEEEEeCCC--------EEEEEecCCCC----cEEEEEEccccCC--eEEEEecCCCcCCEEEEEc---CCCEEEEE
Confidence 566777777654 67888887655 4333333211110 1233322 255555531 23457789
Q ss_pred eCCCCCeEecCCCCCC-CCCCceEEEeeC--CeEEEEeCCCCcEEEEECCCCc-eEEcccccccccceeEEEE-------
Q 016368 272 NVELDKWKEMPEGMHA-GWNGPAASTMNE--EELYVVNEGKGRLSKYDADHDW-WDEVIELAELKGAEKITAA------- 340 (390)
Q Consensus 272 d~~~~~W~~~~~~~~~-~~~~~~~~~~~~--g~lyv~gg~~~~v~~yd~~~~~-W~~i~~~p~~r~~~~~~~~------- 340 (390)
|..+++|..+.. ... .....+++...+ +.+++.++.++.+..||..+.. +.. ..+.........+.+
T Consensus 83 d~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 83 KEENGRWSQIAV-HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP-IIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp EBSSSCBCCCEE-ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC-EEEECCSSCEEEEEECCCC---
T ss_pred EcCCCceEEEEE-eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee-eeeecccCccceEeecCCcccc
Confidence 998887765433 111 111112222122 6788888899999999987652 321 111111111111111
Q ss_pred --------CCEEEEEeeCCceEEEEEcCCC
Q 016368 341 --------RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 341 --------~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++++++.|+.+..|.+||+.+.
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~ 190 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSD 190 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETT
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCC
Confidence 1456777777778889988654
No 187
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.24 E-value=1.6 Score=39.11 Aligned_cols=174 Identities=9% Similarity=-0.037 Sum_probs=101.2
Q ss_pred CCCcEEEeCCCCc---eecCCCCCCCCcceEEEE--ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC
Q 016368 163 LASPLAFNPQSNT---WFFGPQLSIPRRWCAMGS--VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK 237 (390)
Q Consensus 163 ~~~~~~~dp~t~~---W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~ 237 (390)
.+.++++++.... +.....+.. -.++++ .++.||+.-. ....++++++.... -+.+..-.
T Consensus 56 ~~~I~r~~~~g~~~~~~~~~~~l~~---p~glavd~~~g~ly~~d~--------~~~~I~~~~~dG~~----~~~l~~~~ 120 (318)
T 3sov_A 56 EEAIKRTEFNKTESVQNVVVSGLLS---PDGLACDWLGEKLYWTDS--------ETNRIEVSNLDGSL----RKVLFWQE 120 (318)
T ss_dssp TTEEEEEETTSSSCCCEEEEECCSC---CCEEEEETTTTEEEEEET--------TTTEEEEEETTSCS----CEEEECSS
T ss_pred CCcEEEEEccCCCceEEEEcCCCCC---ccEEEEEcCCCeEEEEEC--------CCCEEEEEECCCCc----EEEEEeCC
Confidence 3578888887652 111111111 123444 3789998743 23578999987654 33332211
Q ss_pred CCCccccceEEEEE--CCEEEEEcccCCC-CceeEEEeCCCCCeEec-CCCCCCCCCCceEEEe-eCCeEEEEeCCCCcE
Q 016368 238 DGRFSREAVEAVGF--KGNLCMVNLKGNG-AKDGAIYNVELDKWKEM-PEGMHAGWNGPAASTM-NEEELYVVNEGKGRL 312 (390)
Q Consensus 238 ~~~~~r~~~~~~~~--~g~lyv~gg~g~~-~~~~~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~-~~g~lyv~gg~~~~v 312 (390)
... ..+.++. +|.||+.. .+ ...++++++....=+.+ ...+. .-.++++. .+++||+.....+.|
T Consensus 121 ~~~----P~giavdp~~g~ly~td---~~~~~~I~r~~~dG~~~~~~~~~~l~---~Pnglavd~~~~~lY~aD~~~~~I 190 (318)
T 3sov_A 121 LDQ----PRAIALDPSSGFMYWTD---WGEVPKIERAGMDGSSRFIIINSEIY---WPNGLTLDYEEQKLYWADAKLNFI 190 (318)
T ss_dssp CSS----EEEEEEEGGGTEEEEEE---CSSSCEEEEEETTSCSCEEEECSSCS---CEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCC----ccEEEEeCCCCEEEEEe---cCCCCEEEEEEcCCCCeEEEEECCCC---CccEEEEeccCCEEEEEECCCCEE
Confidence 111 1344443 68999983 11 35678888764432222 22111 11234432 378999999888899
Q ss_pred EEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 313 SKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 313 ~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+++|.....=+.+.. ......+++++.++.||+.-..+..|..+|..+.
T Consensus 191 ~~~d~dG~~~~~~~~-~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 191 HKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp EEEETTSCSCEEEEC-SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEcCCCCceEEEec-CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 999998644343332 1233456788889999998555778999998654
No 188
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.23 E-value=1.4 Score=38.88 Aligned_cols=147 Identities=10% Similarity=0.052 Sum_probs=74.2
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVE 274 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~ 274 (390)
++++++.|+.+. .+.+++..... ............ .......++..++.|+ ......++|..
T Consensus 97 dg~~l~s~~~d~--------~i~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~l~s~s---~d~~~~~~d~~ 158 (340)
T 4aow_A 97 DGQFALSGSWDG--------TLRLWDLTTGT----TTRRFVGHTKDV---LSVAFSSDNRQIVSGS---RDKTIKLWNTL 158 (340)
T ss_dssp TSSEEEEEETTS--------EEEEEETTTTE----EEEEEECCSSCE---EEEEECTTSSCEEEEE---TTSCEEEECTT
T ss_pred CCCEEEEEcccc--------cceEEeecccc----eeeeecCCCCce---eEEEEeecCccceeec---CCCeEEEEEeC
Confidence 566666776654 56778877766 333222222111 1111122344444431 12335577765
Q ss_pred CCCeEecCCCCCCCCCCceEEEee--CCeEEEEeCCCCcEEEEECCCCceEEccccccccccee-EEEE-CCEEEEEeeC
Q 016368 275 LDKWKEMPEGMHAGWNGPAASTMN--EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEK-ITAA-RGRVCAVCEN 350 (390)
Q Consensus 275 ~~~W~~~~~~~~~~~~~~~~~~~~--~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~-~~~~-~g~l~i~g~~ 350 (390)
...-..... .........+.... .+.+++.++.++.+..||..+..-.. .+........ ++.. ++++++.|+.
T Consensus 159 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 159 GVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKT--NHIGHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp SCEEEEECS-SSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCceEEEEe-ccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceee--EecCCCCcEEEEEECCCCCEEEEEeC
Confidence 443222222 11111111122111 34566777788899999998765432 2222222222 3332 6777777777
Q ss_pred CceEEEEEcCCC
Q 016368 351 GERIMVVDVLAS 362 (390)
Q Consensus 351 ~~~v~~~d~~~~ 362 (390)
+..+.+||+.+.
T Consensus 236 Dg~i~iwd~~~~ 247 (340)
T 4aow_A 236 DGQAMLWDLNEG 247 (340)
T ss_dssp TCEEEEEETTTT
T ss_pred CCeEEEEEeccC
Confidence 889999998765
No 189
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.22 E-value=0.79 Score=46.46 Aligned_cols=142 Identities=8% Similarity=-0.083 Sum_probs=77.0
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
++.|++++|... .+.+||+.++. ++....-...... ...+++. .+|.+++-+ .....+||+
T Consensus 482 ~g~lWi~~~t~~--------Gl~~~d~~~~~----~~~~~~~~~~~~~-~~~~i~~d~~g~lWigt-----~~Gl~~~~~ 543 (758)
T 3ott_A 482 EGNVWVLLYNNK--------GIDKINPRTRE----VTKLFADELTGEK-SPNYLLCDEDGLLWVGF-----HGGVMRINP 543 (758)
T ss_dssp TSCEEEEETTCS--------SEEEEETTTTE----EEEECTTTSCGGG-CEEEEEECTTSCEEEEE-----TTEEEEECC
T ss_pred CCCEEEEccCCC--------CcEEEeCCCCc----eEEecCCCcCCCc-ccceEEECCCCCEEEEe-----cCceEEEec
Confidence 578888665432 57889999988 7765321110000 0122332 256777652 234678999
Q ss_pred CCCCeEecCC-CCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEE-ECCEEEEEeeCC
Q 016368 274 ELDKWKEMPE-GMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITA-ARGRVCAVCENG 351 (390)
Q Consensus 274 ~~~~W~~~~~-~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~-~~g~l~i~g~~~ 351 (390)
.+++++.... .++. ....+++. .+|.|++.. .+.+.+||+++.+..... ++.......+.. -+|.||+- ..
T Consensus 544 ~~~~~~~~~~~gl~~-~~i~~i~~-~~g~lWi~t--~~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~l~fG--~~ 616 (758)
T 3ott_A 544 KDESQQSISFGSFSN-NEILSMTC-VKNSIWVST--TNGLWIIDRKTMDARQQN-MTNKRFTSLLFDPKEDCVYLG--GA 616 (758)
T ss_dssp --CCCCBCCCCC----CCEEEEEE-ETTEEEEEE--SSCEEEEETTTCCEEEC---CCCCCSEEEEETTTTEEEEE--CB
T ss_pred CCCceEEecccCCCc-cceEEEEE-CCCCEEEEC--CCCeEEEcCCCceeEEec-CCCCceeeeEEECCCCcEEEe--cC
Confidence 9888776532 1222 12223333 578888765 356899999998876653 332222222222 27788874 33
Q ss_pred ceEEEEEcCC
Q 016368 352 ERIMVVDVLA 361 (390)
Q Consensus 352 ~~v~~~d~~~ 361 (390)
+.+..+|+..
T Consensus 617 ~Gl~~f~p~~ 626 (758)
T 3ott_A 617 DGFGISHSNL 626 (758)
T ss_dssp SEEEEEEC--
T ss_pred CceEEEChhh
Confidence 4677777764
No 190
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.20 E-value=0.48 Score=42.07 Aligned_cols=158 Identities=14% Similarity=0.218 Sum_probs=79.2
Q ss_pred cEEEeCCCC-ceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCcccc
Q 016368 166 PLAFNPQSN-TWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSRE 244 (390)
Q Consensus 166 ~~~~dp~t~-~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~ 244 (390)
++.||+..+ .|+..... . .....+..++.||+... ...+.+||+. +. ..|+....... .
T Consensus 80 l~~~d~~g~~~~~~~~~~--~-~~~~~~~~~~~l~v~t~---------~~~l~~~d~~-g~--~~~~~~~~~~~--~--- 139 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDTKK--A-IVSDFTIFEDILYVTSM---------DGHLYAINTD-GT--EKWRFKTKKAI--Y--- 139 (330)
T ss_dssp EEEECCCGGGGGGSCC--------CCEEEETTEEEEECT---------TSEEEEECTT-SC--EEEEEECSSCC--C---
T ss_pred EEEECCCCcEEEEEECCC--C-cccCceEECCEEEEEec---------CCEEEEEcCC-CC--EEEEEcCCCce--e---
Confidence 888997433 34432111 1 11223334888887431 1368889988 33 12765432221 1
Q ss_pred ceEEEEE-CCEEEEEcccCCCCceeEEEeCCCC-CeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCC-Cc
Q 016368 245 AVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELD-KWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADH-DW 321 (390)
Q Consensus 245 ~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~-~~ 321 (390)
.+.+.. +|.+|+.. .......||+... .|+.... ... ....+...+|.||+.. +.++.||... ..
T Consensus 140 -~~~~~~~~g~l~vgt----~~~~l~~~d~~g~~~~~~~~~---~~~-~~~~~~d~~g~l~v~t---~~l~~~d~~g~~~ 207 (330)
T 3hxj_A 140 -ATPIVSEDGTIYVGS----NDNYLYAINPDGTEKWRFKTN---DAI-TSAASIGKDGTIYFGS---DKVYAINPDGTEK 207 (330)
T ss_dssp -SCCEECTTSCEEEEC----TTSEEEEECTTSCEEEEEECS---SCC-CSCCEECTTCCEEEES---SSEEEECTTSCEE
T ss_pred -eeeEEcCCCEEEEEc----CCCEEEEECCCCCEeEEEecC---CCc-eeeeEEcCCCEEEEEe---CEEEEECCCCcEE
Confidence 223334 77888763 2355778998722 3655322 111 1223321477777655 7889999442 24
Q ss_pred eEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEc
Q 016368 322 WDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 322 W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~ 359 (390)
|+..... ....+++.. +|.||+. ..+..++.+|.
T Consensus 208 ~~~~~~~---~~~~~~~~~~~g~l~v~-t~~~gl~~~~~ 242 (330)
T 3hxj_A 208 WNFYAGY---WTVTRPAISEDGTIYVT-SLDGHLYAINP 242 (330)
T ss_dssp EEECCSS---CCCSCCEECTTSCEEEE-ETTTEEEEECT
T ss_pred EEEccCC---cceeceEECCCCeEEEE-cCCCeEEEECC
Confidence 6544321 112223333 4567665 33446666664
No 191
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.15 E-value=1 Score=40.11 Aligned_cols=145 Identities=7% Similarity=0.028 Sum_probs=80.7
Q ss_pred CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCC
Q 016368 196 GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVE 274 (390)
Q Consensus 196 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~ 274 (390)
+.+++.|+.+. .+.+||..+.. ......+...... -.+++.. +++..+.|+ ....+.+||..
T Consensus 54 g~~l~~~~~dg--------~i~iw~~~~~~----~~~~~~~~~h~~~--v~~~~~~~~~~~l~s~~---~dg~v~iwd~~ 116 (368)
T 3mmy_A 54 GNFLIAGSWAN--------DVRCWEVQDSG----QTIPKAQQMHTGP--VLDVCWSDDGSKVFTAS---CDKTAKMWDLS 116 (368)
T ss_dssp SEEEEEEETTS--------EEEEEEECTTS----CEEEEEEEECSSC--EEEEEECTTSSEEEEEE---TTSEEEEEETT
T ss_pred ceEEEEECCCC--------cEEEEEcCCCC----ceeEEEeccccCC--EEEEEECcCCCEEEEEc---CCCcEEEEEcC
Confidence 47777777664 68899998744 3322222111110 1223322 555555531 23457789998
Q ss_pred CCCeEecCCCCCCCCCCceEEE--eeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCc
Q 016368 275 LDKWKEMPEGMHAGWNGPAAST--MNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGE 352 (390)
Q Consensus 275 ~~~W~~~~~~~~~~~~~~~~~~--~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~ 352 (390)
+.+-..... .......+.. ..++.+++.++.++.+..||..+.+-. ..+........+....+.+++ +..+.
T Consensus 117 ~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~ 190 (368)
T 3mmy_A 117 SNQAIQIAQ---HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM--MVLQLPERCYCADVIYPMAVV-ATAER 190 (368)
T ss_dssp TTEEEEEEE---CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS--EEEECSSCEEEEEEETTEEEE-EEGGG
T ss_pred CCCceeecc---ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE--EEEecCCCceEEEecCCeeEE-EeCCC
Confidence 876554322 1111122221 257888889988999999998875422 222222233334444554444 46667
Q ss_pred eEEEEEcCCCC
Q 016368 353 RIMVVDVLASP 363 (390)
Q Consensus 353 ~v~~~d~~~~~ 363 (390)
.+.+||+....
T Consensus 191 ~i~~~~~~~~~ 201 (368)
T 3mmy_A 191 GLIVYQLENQP 201 (368)
T ss_dssp CEEEEECSSSC
T ss_pred cEEEEEecccc
Confidence 89999987753
No 192
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.12 E-value=0.0064 Score=56.37 Aligned_cols=186 Identities=11% Similarity=0.098 Sum_probs=77.7
Q ss_pred EEeecCeEEEEEeecCCCCCCCCCcEEEeCCCC--ceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEE
Q 016368 142 SLGVRNNLVLIAATTPHFLPALASPLAFNPQSN--TWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKW 219 (390)
Q Consensus 142 ~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~--~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~y 219 (390)
..++.++.+++++.. ..++.+|..++ .|+.-.. ......++.++++|+.++.+. .+.++
T Consensus 4 sP~v~~~~v~~gs~d-------g~v~a~d~~tG~~~W~~~~~----~~~s~p~~~~g~~~v~~s~dg--------~l~a~ 64 (369)
T 2hz6_A 4 TVTLPETLLFVSTLD-------GSLHAVSKRTGSIKWTLKED----PVLQVPTHVEEPAFLPDPNDG--------SLYTL 64 (369)
T ss_dssp ----CTTEEEEEETT-------SEEEEEETTTCCEEEEEECC----CSCCCC-----CCEEECTTTC--------CEEEC
T ss_pred CCeeeCCEEEEEcCC-------CEEEEEECCCCCEEEEecCC----CceecceEcCCCEEEEeCCCC--------EEEEE
Confidence 344567777777532 36888998887 4654221 111222344677887765443 68889
Q ss_pred ECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCC--CeEecCCCCCCCCCCceEEEe
Q 016368 220 DLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELD--KWKEMPEGMHAGWNGPAASTM 297 (390)
Q Consensus 220 d~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~ 297 (390)
|.++++.. |+.-...+.... ...++..++.+|+-+ ......++|.+++ .|+.-.. .. ...+-
T Consensus 65 d~~tG~~~--w~~~~~~~~~~~---~sp~~~~~~~v~~g~----~dg~v~a~D~~tG~~~w~~~~~-~~-----~~~~p- 128 (369)
T 2hz6_A 65 GSKNNEGL--TKLPFTIPELVQ---ASPCRSSDGILYMGK----KQDIWYVIDLLTGEKQQTLSSA-FA-----DSLSP- 128 (369)
T ss_dssp -----CCS--EECSCCHHHHHT---TCSCC-----CCCCE----EEEEEEEECCC-------------------------
T ss_pred ECCCCcee--eeeeccCccccc---cCceEecCCEEEEEe----CCCEEEEEECCCCcEEEEecCC-Cc-----ccccc-
Confidence 98776533 442111110000 011111455555431 1233567888765 4664332 10 11111
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCc--eEEcccccccccceeEEE-----ECCEEEEEeeCCceEEEEEcCCCCCcceEec
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDW--WDEVIELAELKGAEKITA-----ARGRVCAVCENGERIMVVDVLASPARAWLVD 370 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~--W~~i~~~p~~r~~~~~~~-----~~g~l~i~g~~~~~v~~~d~~~~~~~~W~~~ 370 (390)
.++.|| ++..++.+..||.++.+ |+.-..- ....+. .++.+|+. ..+..++.+|..+.. ..|+..
T Consensus 129 ~~~~v~-~~~~dg~v~a~d~~tG~~~W~~~~~~-----~~~~~~~~~~~~~~~v~~~-~~dg~v~a~d~~tG~-~~W~~~ 200 (369)
T 2hz6_A 129 STSLLY-LGRTEYTITMYDTKTRELRWNATYFD-----YAASLPEDDVDYKMSHFVS-NGDGLVVTVDSESGD-VLWIQN 200 (369)
T ss_dssp ----EE-EEEEEEEEECCCSSSSSCCCEEEEEE-----ECCBCCCCCTTCCCCEEEE-ETSCEEEEECTTTCC-EEEEEE
T ss_pred cCCEEE-EEecCCEEEEEECCCCCEEEeEeccc-----ccCccccCCccccceEEEE-CCCCEEEEEECCCCc-EEEEec
Confidence 344444 45556688999987654 7643210 011111 12566664 556688899987653 358743
No 193
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.09 E-value=1.9 Score=39.09 Aligned_cols=201 Identities=9% Similarity=-0.028 Sum_probs=99.3
Q ss_pred CceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCcee
Q 016368 98 SSMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWF 177 (390)
Q Consensus 98 ~~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~ 177 (390)
....++.+|+.+++-..+...+...... ....-++..+++... -..++++|+.+++-+
T Consensus 58 g~~~l~~~d~~~g~~~~lt~~~~~~~~~---------------~~~spdg~~l~~~~~-------~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 58 GPWNYYLLDLNTQVATQLTEGRGDNTFG---------------GFLSPDDDALFYVKD-------GRNLMRVDLATLEEN 115 (388)
T ss_dssp SSCEEEEEETTTCEEEECCCSSCBCSSS---------------CEECTTSSEEEEEET-------TTEEEEEETTTCCEE
T ss_pred CCceEEEEeCCCCceEEeeeCCCCCccc---------------eEEcCCCCEEEEEeC-------CCeEEEEECCCCcce
Confidence 4457899999988877776444311101 222334555554432 147899999988766
Q ss_pred cCCCCCCCCcceEEEE--ECCEEEEEeccCCC--------------CCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 178 FGPQLSIPRRWCAMGS--VGGVVYVASGVGAH--------------YRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 178 ~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~--------------~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
.+...+.......... -++++++.--.... ........++++|+.++. -+.+..-... .
T Consensus 116 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~----~~~l~~~~~~-~ 190 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE----STVILQENQW-L 190 (388)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC----EEEEEEESSC-E
T ss_pred eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc----eEEeecCCcc-c
Confidence 5544333222112111 24443332110000 001133578999999887 5555432211 1
Q ss_pred cccceEEEEE-CCEEEEEcccC---CCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe-EEEEeCCCC----cE
Q 016368 242 SREAVEAVGF-KGNLCMVNLKG---NGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE-LYVVNEGKG----RL 312 (390)
Q Consensus 242 ~r~~~~~~~~-~g~lyv~gg~g---~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~-lyv~gg~~~----~v 312 (390)
......- +|+..++...+ .....+..+|..+...+.+.. ..............+|+ |+.+....+ .+
T Consensus 191 ---~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (388)
T 3pe7_A 191 ---GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT-HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFI 266 (388)
T ss_dssp ---EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC-CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEE
T ss_pred ---cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee-CCCCcccccceECCCCCEEEEEecCCCCCcceE
Confidence 1222223 45533332111 113467788888777666654 21111111122224666 544433222 39
Q ss_pred EEEECCCCceEEccccc
Q 016368 313 SKYDADHDWWDEVIELA 329 (390)
Q Consensus 313 ~~yd~~~~~W~~i~~~p 329 (390)
++||.++.+-+.+..++
T Consensus 267 ~~~d~~~g~~~~l~~~~ 283 (388)
T 3pe7_A 267 YSADPETLENRQLTSMP 283 (388)
T ss_dssp EEECTTTCCEEEEEEEC
T ss_pred EEEecCCCceEEEEcCC
Confidence 99999998877665544
No 194
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.07 E-value=1.9 Score=41.69 Aligned_cols=147 Identities=7% Similarity=-0.037 Sum_probs=80.4
Q ss_pred EEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccc-cceEEEEE-C-CEEEEEcccCCCCceeEEEeCC
Q 016368 198 VYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSR-EAVEAVGF-K-GNLCMVNLKGNGAKDGAIYNVE 274 (390)
Q Consensus 198 lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r-~~~~~~~~-~-g~lyv~gg~g~~~~~~~~yd~~ 274 (390)
+++.|+.+. .+.+||..+.. - +..+....... ...+++.. + ++.++.|+ ....+.+||..
T Consensus 175 ~l~~~~~d~--------~v~vwd~~~~~----~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~vwd~~ 237 (615)
T 1pgu_A 175 RSMTVGDDG--------SVVFYQGPPFK----F--SASDRTHHKQGSFVRDVEFSPDSGEFVITVG---SDRKISCFDGK 237 (615)
T ss_dssp EEEEEETTT--------EEEEEETTTBE----E--EEEECSSSCTTCCEEEEEECSTTCCEEEEEE---TTCCEEEEETT
T ss_pred EEEEEeCCC--------cEEEEeCCCcc----e--eeeecccCCCCceEEEEEECCCCCCEEEEEe---CCCeEEEEECC
Confidence 666666553 78889987755 2 22222110000 01233332 4 56666542 23457799988
Q ss_pred CCCeEecCCCC--CCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccc---cccceeEEEECCEEEEEee
Q 016368 275 LDKWKEMPEGM--HAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAE---LKGAEKITAARGRVCAVCE 349 (390)
Q Consensus 275 ~~~W~~~~~~~--~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~---~r~~~~~~~~~g~l~i~g~ 349 (390)
+.+-...-... ........+... ++..++.++.++.+..||..+.+-...-..+. ......+...++..++.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 316 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLS 316 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEE
T ss_pred CCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEE
Confidence 77644322100 111222233333 88888999889999999998765433322221 1122233333666777777
Q ss_pred CCceEEEEEcCCC
Q 016368 350 NGERIMVVDVLAS 362 (390)
Q Consensus 350 ~~~~v~~~d~~~~ 362 (390)
.+..+.+||+.+.
T Consensus 317 ~~g~i~~~d~~~~ 329 (615)
T 1pgu_A 317 LDGTLNFYELGHD 329 (615)
T ss_dssp TTSCEEEEETTEE
T ss_pred CCCCEEEEECCCC
Confidence 7889999998753
No 195
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.07 E-value=3 Score=41.25 Aligned_cols=174 Identities=10% Similarity=-0.014 Sum_probs=101.9
Q ss_pred CCCcEEEeCCCCceecCCCCCCCCcceEEEE--ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc--CCC
Q 016368 163 LASPLAFNPQSNTWFFGPQLSIPRRWCAMGS--VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ--LKD 238 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~--~~~ 238 (390)
.+.++++++.....+.+...... .-.++++ .++.||+.-. ....+++.++.... -+.+.. +..
T Consensus 370 ~~~I~r~~~~g~~~~~v~~~~~~-~p~GlAvD~~~~~lY~tD~--------~~~~I~v~~~~G~~----~~~l~~~~l~~ 436 (619)
T 3s94_A 370 VRAIRRSFIDGSGSQFVVTAQIA-HPDGIAVDWVARNLYWTDT--------GTDRIEVTRLNGTM----RKILISEDLEE 436 (619)
T ss_dssp TTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEET--------TTTEEEEEETTSCS----CEEEECTTCCS
T ss_pred CCeEEEEEcCCCccEEEEECCCC-CcCceEEecccCcEEEEeC--------CCCcEEEEeCCCCe----EEEEEECCCCC
Confidence 35688888876555443221111 1123444 3789999732 34588999987665 344432 222
Q ss_pred CCccccceEEEEE--CCEEEEEcccCCC-CceeEEEeCCCCCeEecCCCCCCCCCCc-eEEEe-eCCeEEEEeCCCCcEE
Q 016368 239 GRFSREAVEAVGF--KGNLCMVNLKGNG-AKDGAIYNVELDKWKEMPEGMHAGWNGP-AASTM-NEEELYVVNEGKGRLS 313 (390)
Q Consensus 239 ~~~~r~~~~~~~~--~g~lyv~gg~g~~-~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~-~~g~lyv~gg~~~~v~ 313 (390)
+ .+.++. +|.||+.. .+ ...++..++....=+.+.. .....+ ++++. .+++||+.....+.|+
T Consensus 437 P------~~iavdp~~G~ly~tD---~g~~~~I~r~~~dG~~~~~l~~---~~l~~P~GlalD~~~~~LY~aD~~~~~I~ 504 (619)
T 3s94_A 437 P------RAIVLDPMVGYMYWTD---WGEIPKIERAALDGSDRVVLVN---TSLGWPNGLALDYDEGKIYWGDAKTDKIE 504 (619)
T ss_dssp E------EEEEEETTTTEEEEEE---CSSSCEEEEEETTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred e------eeEEEEcCCCcEEEec---CCCCCEEEEEccCCCccEEEEe---CCCCCCeeeEEcccCCEEEEEECCCCEEE
Confidence 1 345554 68999982 11 2456777765432222221 111122 34431 3689999998888999
Q ss_pred EEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 314 KYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 314 ~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++|+....=+.+.. ......+++++.++.||+.-.....|+..|..+.
T Consensus 505 ~~~~dG~~~~~~~~-~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 505 VMNTDGTGRRVLVE-DKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEESSSCCCEEEEE-CCCCSSCCEEEETTEEEEECTTSSCEEEEESSSC
T ss_pred EEecCCCceEEEec-cCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC
Confidence 99987544333321 1223456888899999998555668888888776
No 196
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.05 E-value=0.19 Score=47.42 Aligned_cols=144 Identities=16% Similarity=0.129 Sum_probs=83.2
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCE-EEEEcccC-CCCceeEEE
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGN-LCMVNLKG-NGAKDGAIY 271 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~-lyv~gg~g-~~~~~~~~y 271 (390)
++.||+.-- . ..+.++|+.++. .+.+...... ...+++ .+|+ ||+....+ ........+
T Consensus 149 ~g~Lyv~d~--------~-~~I~~id~~~~~----v~~~~~~~~~-----P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 149 HNHLYLVGE--------Q-HPTRLIDFEKEY----VSTVYSGLSK-----VRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp EEEEEEEEB--------T-EEEEEEETTTTE----EEEEECCCSC-----EEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CCeEEEEeC--------C-CcEEEEECCCCE----EEEEecCCCC-----cceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 477898732 1 588999999987 6665442111 133333 3455 99884221 112234456
Q ss_pred eCCCCCeE---ecCCCCCCCCCCceEEEee-CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCE-EE
Q 016368 272 NVELDKWK---EMPEGMHAGWNGPAASTMN-EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR-VC 345 (390)
Q Consensus 272 d~~~~~W~---~~~~~~~~~~~~~~~~~~~-~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~-l~ 345 (390)
+.. ..|. .+.. . .....+++.. +|.||+.....+.+++||+.+..-..+..++.......++.. +|+ ||
T Consensus 211 ~~~-g~~~~~~~l~~-~---~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 211 TRE-SGFKVITELTK-G---QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp EGG-GTSCSEEEEEE-C---SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred eCC-Cceeeeeeecc-C---CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 643 3333 2222 1 1123444323 789999988778999999987655444433332333456554 454 99
Q ss_pred EEeeCCceEEEEEcCC
Q 016368 346 AVCENGERIMVVDVLA 361 (390)
Q Consensus 346 i~g~~~~~v~~~d~~~ 361 (390)
+.-...+.|+.+|...
T Consensus 286 v~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEETTTTEEEEEEEET
T ss_pred EEECCCCEEEEEeCCc
Confidence 9866677888887654
No 197
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.01 E-value=1.4 Score=38.90 Aligned_cols=93 Identities=13% Similarity=0.043 Sum_probs=52.5
Q ss_pred ceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEE
Q 016368 266 KDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVC 345 (390)
Q Consensus 266 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~ 345 (390)
..+.+||..+.+-...-. . ......+++...++++++.|+.++.+..||..+.. .+..+........+....+..+
T Consensus 195 ~~i~i~d~~~~~~~~~~~-~-h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~ 270 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHI-G-HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYW 270 (340)
T ss_dssp SCEEEEETTTTEEEEEEC-C-CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTE--EEEEEECSSCEEEEEECSSSSE
T ss_pred CEEEEEECCCCceeeEec-C-CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCc--eeeeecCCceEEeeecCCCCce
Confidence 346788888765433211 1 11111223323578899999999999999988643 3333322222223333344444
Q ss_pred EEeeCCceEEEEEcCCC
Q 016368 346 AVCENGERIMVVDVLAS 362 (390)
Q Consensus 346 i~g~~~~~v~~~d~~~~ 362 (390)
+.++.+..+.+||+.+.
T Consensus 271 ~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 271 LCAATGPSIKIWDLEGK 287 (340)
T ss_dssp EEEEETTEEEEEETTTT
T ss_pred eeccCCCEEEEEECCCC
Confidence 45555678889988754
No 198
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.99 E-value=3.2 Score=41.26 Aligned_cols=185 Identities=8% Similarity=0.049 Sum_probs=92.8
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCC-ccccccEEcccCCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSD-REDWKWEKKAQLKDGR 240 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~-~~~~~W~~~~~~~~~~ 240 (390)
..+++||..+++-..+............... +++..+++..+. ......+.++|..+. . .+.+.......
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~---~~~~~~v~~~d~~~g~~----~~~~~~~~~~~ 307 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNR---AQNECKVNAYDAETGRF----VRTLFVETDKH 307 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECT---TSCEEEEEEEETTTCCE----EEEEEEEECSS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCC---CCCeeEEEEEECCCCce----eeEEEEccCCC
Confidence 5689999998876555432111122222222 555444443332 223458899999988 5 55543211111
Q ss_pred ccccceE-EEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCce-EEEeeCC-eEEEEeCCCC----c
Q 016368 241 FSREAVE-AVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPA-ASTMNEE-ELYVVNEGKG----R 311 (390)
Q Consensus 241 ~~r~~~~-~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~g-~lyv~gg~~~----~ 311 (390)
....... ...- +|++++.+.. .+....+.+|...+....+.. - ...... ++...+| .||+.+..++ .
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~~~~~~~l~~-~--~~~v~~~~~~spdg~~l~~~~~~~~~~~~~ 383 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTTGRLIRQVTK-G--EWEVTNFAGFDPKGTRLYFESTEASPLERH 383 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETTSCEEEECCC-S--SSCEEEEEEECTTSSEEEEEESSSCTTCBE
T ss_pred eECccCCceeecCCCCEEEEEEcc-CCccEEEEEECCCCEEEecCC-C--CeEEEeeeEEcCCCCEEEEEecCCCCceEE
Confidence 0000011 2223 7776655422 123456677766666666644 1 111112 2222344 5666665544 8
Q ss_pred EEEEECCCCceEEcccccccccceeEEEE-CCEEEEEe-eCC---ceEEEEEcCCC
Q 016368 312 LSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVC-ENG---ERIMVVDVLAS 362 (390)
Q Consensus 312 v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g-~~~---~~v~~~d~~~~ 362 (390)
++.+|..+...+.+.. ....+.+... +|+.+++. ... ..++++|+.+.
T Consensus 384 l~~~d~~~~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 384 FYCIDIKGGKTKDLTP---ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEEEETTCCCCEESCC---SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEEcCCCCceeccC---CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 9999998877665542 2222333333 55544443 221 35888887654
No 199
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.95 E-value=0.74 Score=46.02 Aligned_cols=175 Identities=9% Similarity=0.007 Sum_probs=87.1
Q ss_pred CCcEEEeCCCCceec-CCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFF-GPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~-~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+.+||..+++-.. +... ...-.+++.. +++.++.|+.+. .+.+||...... ............
T Consensus 452 g~v~vwd~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~D~--------~i~iwd~~~~~~---~~~~~~~~~h~~ 518 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGH--TKDVLSVAFSLDNRQIVSASRDR--------TIKLWNTLGECK---YTISEGGEGHRD 518 (694)
T ss_dssp SEEEEEETTTTEEEEEEECC--SSCEEEEEECTTSSCEEEEETTS--------CEEEECTTSCEE---EEECSSTTSCSS
T ss_pred CcEEEEECCCCcceeEEeCC--CCCEEEEEEeCCCCEEEEEeCCC--------EEEEEECCCCcc---eeeccCCCCCCC
Confidence 468899988764322 1110 0111122222 556666666654 677888765540 222111111111
Q ss_pred cccceEEEEE--CC--EEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEEC
Q 016368 242 SREAVEAVGF--KG--NLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDA 317 (390)
Q Consensus 242 ~r~~~~~~~~--~g--~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~ 317 (390)
...++.+ ++ ..++.|+ ....+.+||+.+.+-...-. - ......+++...++++++.|+.++.+..||.
T Consensus 519 ---~v~~~~~~~~~~~~~l~s~s---~d~~v~vwd~~~~~~~~~~~-~-h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~ 590 (694)
T 3dm0_A 519 ---WVSCVRFSPNTLQPTIVSAS---WDKTVKVWNLSNCKLRSTLA-G-HTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 590 (694)
T ss_dssp ---CEEEEEECSCSSSCEEEEEE---TTSCEEEEETTTCCEEEEEC-C-CSSCEEEEEECTTSSEEEEEETTSBCEEEET
T ss_pred ---cEEEEEEeCCCCcceEEEEe---CCCeEEEEECCCCcEEEEEc-C-CCCCEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 1222222 22 2344421 23457789988765432211 0 1111122332357899999999999999999
Q ss_pred CCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 318 DHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 318 ~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+.+ .+..+.......+++.. ++.+.+. +....|.+||+.+.
T Consensus 591 ~~~~--~~~~~~~~~~v~~~~~sp~~~~l~~-~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 591 AEGK--KLYSLEANSVIHALCFSPNRYWLCA-ATEHGIKIWDLESK 633 (694)
T ss_dssp TTTE--EEECCBCSSCEEEEEECSSSSEEEE-EETTEEEEEETTTT
T ss_pred CCCc--eEEEecCCCcEEEEEEcCCCcEEEE-EcCCCEEEEECCCC
Confidence 8764 23333222223334444 4444444 44557999998765
No 200
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.90 E-value=2.1 Score=38.72 Aligned_cols=136 Identities=12% Similarity=0.037 Sum_probs=72.6
Q ss_pred cCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE--CCE-EEEEcccCCC---CceeEEEeCCCCCeEecCCCCC
Q 016368 213 ARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF--KGN-LCMVNLKGNG---AKDGAIYNVELDKWKEMPEGMH 286 (390)
Q Consensus 213 ~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~--~g~-lyv~gg~g~~---~~~~~~yd~~~~~W~~~~~~~~ 286 (390)
...++++|+.++. .+.+...... ....+.. +++ +++... +.. ...+.++|..+.++..+.. ..
T Consensus 167 ~~~l~~~d~~~g~----~~~~~~~~~~-----~~~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~~~l~~-~~ 235 (396)
T 3c5m_A 167 TCRLIKVDIETGE----LEVIHQDTAW-----LGHPIYRPFDDSTVGFCHE-GPHDLVDARMWLVNEDGSNVRKIKE-HA 235 (396)
T ss_dssp CEEEEEEETTTCC----EEEEEEESSC-----EEEEEEETTEEEEEEEEEC-SCSSSCSCCCEEEETTSCCCEESSC-CC
T ss_pred cceEEEEECCCCc----EEeeccCCcc-----cccceECCCCCCEEEEEec-CCCCCCCceEEEEECCCCceeEeec-cC
Confidence 3478899998887 6655432211 1222222 344 544431 111 1457889998887776654 11
Q ss_pred CCCCCceEEEeeCCe-EEEEeCC--CC--cEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEee-----------
Q 016368 287 AGWNGPAASTMNEEE-LYVVNEG--KG--RLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCE----------- 349 (390)
Q Consensus 287 ~~~~~~~~~~~~~g~-lyv~gg~--~~--~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~----------- 349 (390)
............+|+ |++.... .. .+++||..+.+...+...+.. . ..... +|+++++..
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~--~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPC--S-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSE--E-EEEECSSSSEEEEEECCC--------
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCC--C-CCccCCCCceEEEecCCcceeecccc
Confidence 111111122224665 4444321 22 499999998877776544421 1 22223 677666533
Q ss_pred -----CCceEEEEEcCCC
Q 016368 350 -----NGERIMVVDVLAS 362 (390)
Q Consensus 350 -----~~~~v~~~d~~~~ 362 (390)
+...++++|+.+.
T Consensus 313 ~~~~~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAK 330 (396)
T ss_dssp --CCCCCCEEEEEETTTT
T ss_pred ccccCCCCcEEEEecccC
Confidence 2357999998765
No 201
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.86 E-value=0.94 Score=44.65 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=70.7
Q ss_pred EEEEECCEEEEEeccCCCCCCCccCeEEEEEC-CCCccccccEEcccCCCC-----CccccceEEEE--ECCE----EEE
Q 016368 190 AMGSVGGVVYVASGVGAHYRGDVARSMKKWDL-KSDREDWKWEKKAQLKDG-----RFSREAVEAVG--FKGN----LCM 257 (390)
Q Consensus 190 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~-~t~~~~~~W~~~~~~~~~-----~~~r~~~~~~~--~~g~----lyv 257 (390)
+-++.++.||+.+.. ...+.++|. .|++. .|+.-...... .+.....+.++ .+++ +|+
T Consensus 57 tP~v~~g~vyv~~~~--------~~~v~AlD~~~tG~~--lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v 126 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF--------PNNTFALGLDDPGTI--LWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILK 126 (599)
T ss_dssp CCEEETTEEEEECST--------TTCEEEEETTCTTSE--EEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEE
T ss_pred ccEEECCEEEEEeCC--------CCEEEEEeCCCCCcE--EEEECCCCCccccccccccccccceEEEecCCcceeEEEE
Confidence 345679999998642 236889999 77763 48865443211 00000122344 5777 888
Q ss_pred EcccCCCCceeEEEeCCCC--CeEecCCCCCCC-CCCceEEEeeCCeEEEEeC-----CCCcEEEEECCCCc--eEEc
Q 016368 258 VNLKGNGAKDGAIYNVELD--KWKEMPEGMHAG-WNGPAASTMNEEELYVVNE-----GKGRLSKYDADHDW--WDEV 325 (390)
Q Consensus 258 ~gg~g~~~~~~~~yd~~~~--~W~~~~~~~~~~-~~~~~~~~~~~g~lyv~gg-----~~~~v~~yd~~~~~--W~~i 325 (390)
.. ....+.++|.+++ .|+.-....... ....+.++ .+|.||+-.+ .++.+..||.++.+ |+.-
T Consensus 127 ~t----~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 127 TQ----LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EC----TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred Ec----CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 74 2345778998876 588643211111 11222233 6888876543 36789999998765 8754
No 202
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.73 E-value=1.2 Score=44.50 Aligned_cols=118 Identities=15% Similarity=0.170 Sum_probs=71.0
Q ss_pred EEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC-----ccccceEEEEECCEEEEEcccCCCC
Q 016368 191 MGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR-----FSREAVEAVGFKGNLCMVNLKGNGA 265 (390)
Q Consensus 191 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~-----~~r~~~~~~~~~g~lyv~gg~g~~~ 265 (390)
-++.+++||+.... ..+..+|..|++. .|+.-...+... +.....+.++.++++|+.. ..
T Consensus 62 P~v~~g~vyv~~~~---------~~v~AlD~~tG~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~----~d 126 (668)
T 1kv9_A 62 PLFHDGVIYTSMSW---------SRVIAVDAASGKE--LWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT----LD 126 (668)
T ss_dssp CEEETTEEEEEEGG---------GEEEEEETTTCCE--EEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC----TT
T ss_pred CEEECCEEEEECCC---------CeEEEEECCCChh--ceEECCCCCccccccccccCCccceEEECCEEEEEc----CC
Confidence 45679999997642 3688899888763 387644322110 0000123455789999874 34
Q ss_pred ceeEEEeCCCC--CeEecCCCCCCC-CCCceEEEeeCCeEEEEeCC-----CCcEEEEECCCCc--eEE
Q 016368 266 KDGAIYNVELD--KWKEMPEGMHAG-WNGPAASTMNEEELYVVNEG-----KGRLSKYDADHDW--WDE 324 (390)
Q Consensus 266 ~~~~~yd~~~~--~W~~~~~~~~~~-~~~~~~~~~~~g~lyv~gg~-----~~~v~~yd~~~~~--W~~ 324 (390)
..+.++|.+++ .|+......... ....+.++ .++.+|+..+. ++.++.||.++.+ |+.
T Consensus 127 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 55789998876 588754311111 12223333 68888775432 4689999998765 875
No 203
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.70 E-value=2 Score=37.59 Aligned_cols=155 Identities=9% Similarity=-0.001 Sum_probs=71.6
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCc-------eecCCCCCCCCcceE-EEEE-C--CEEEEEeccCCCCCCCccCe
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNT-------WFFGPQLSIPRRWCA-MGSV-G--GVVYVASGVGAHYRGDVARS 215 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~-------W~~~~~~~~~r~~~~-~~~~-~--~~lyv~GG~~~~~~~~~~~~ 215 (390)
+.+++.++.. ..+.+||..+++ |+.+..+........ ++.. + +.+++.|+.+. .
T Consensus 71 ~~~l~s~~~d-------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg--------~ 135 (351)
T 3f3f_A 71 GRIIASASYD-------KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG--------I 135 (351)
T ss_dssp CSEEEEEETT-------SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC--------E
T ss_pred CCEEEEEcCC-------CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC--------c
Confidence 4566665432 467888887652 222222222222222 2222 3 66677766554 7
Q ss_pred EEEEECCCCccccccEEccc---CCCC--CccccceEEEEE----CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCC
Q 016368 216 MKKWDLKSDREDWKWEKKAQ---LKDG--RFSREAVEAVGF----KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMH 286 (390)
Q Consensus 216 ~~~yd~~t~~~~~~W~~~~~---~~~~--~~~r~~~~~~~~----~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~ 286 (390)
+.+||..+......|..... +... .......+.... ++.+++.|+. ......++....+...+.....
T Consensus 136 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 212 (351)
T 3f3f_A 136 LRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL---EQAIIYQRGKDGKLHVAAKLPG 212 (351)
T ss_dssp EEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET---TEEEEEEECTTSCEEEEEECCC
T ss_pred EEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC---CCcEEEEccCCCceeeeeecCC
Confidence 88999876652111321110 1000 000001222221 2556665421 1223455555555543333111
Q ss_pred CCCCCceEEEeeCC----eEEEEeCCCCcEEEEECCC
Q 016368 287 AGWNGPAASTMNEE----ELYVVNEGKGRLSKYDADH 319 (390)
Q Consensus 287 ~~~~~~~~~~~~~g----~lyv~gg~~~~v~~yd~~~ 319 (390)
....-.+++...++ .+++.|+.++.+..||..+
T Consensus 213 h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 213 HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 11112233332444 7888888899888888765
No 204
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.68 E-value=1.3 Score=44.39 Aligned_cols=119 Identities=16% Similarity=0.169 Sum_probs=71.6
Q ss_pred EEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC-----ccccceEEEEECCEEEEEcccCCCC
Q 016368 191 MGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR-----FSREAVEAVGFKGNLCMVNLKGNGA 265 (390)
Q Consensus 191 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~-----~~r~~~~~~~~~g~lyv~gg~g~~~ 265 (390)
-++.+++||+.+.. ..+..+|..|++. .|+.-...+... +.....+.++.++++|+.+ ..
T Consensus 66 P~v~~g~vyv~~~~---------~~v~AlD~~tG~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~----~d 130 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF---------SVVYALDARDGRL--IWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV----LD 130 (689)
T ss_dssp CEEETTEEEEECGG---------GCEEEEETTTCCE--EEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC----TT
T ss_pred CEEECCEEEEEcCC---------CeEEEEECCCCce--eEEEcCCCCccccccccccCCCCccEEECCEEEEEc----cC
Confidence 35679999997542 3688999988773 488644322110 0000123456899999874 34
Q ss_pred ceeEEEeCCCC--CeEecCC-CCCC-CCCCceEEEeeCCeEEEEeC-----CCCcEEEEECCCCc--eEEc
Q 016368 266 KDGAIYNVELD--KWKEMPE-GMHA-GWNGPAASTMNEEELYVVNE-----GKGRLSKYDADHDW--WDEV 325 (390)
Q Consensus 266 ~~~~~yd~~~~--~W~~~~~-~~~~-~~~~~~~~~~~~g~lyv~gg-----~~~~v~~yd~~~~~--W~~i 325 (390)
..+..+|.+++ .|+.... .... .....+.++ .+|.+|+-.+ .++.++.||.++.+ |+.-
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV-VNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE-ECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 55788999876 5886542 1111 111223333 7888887533 24689999998865 8753
No 205
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.66 E-value=4.2 Score=41.05 Aligned_cols=169 Identities=11% Similarity=0.138 Sum_probs=90.6
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc----CCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ----LKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~----~~~~ 239 (390)
+.+.+||+.+.++...... ....-.+....++.|++.. ...+.+||+.++. .+.... ++..
T Consensus 82 ~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt----------~~Gl~~~~~~~~~----~~~~~~~~~~l~~~ 146 (758)
T 3ott_A 82 NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGA----------LNGLYTYQLQSRK----LTSFDTRRNGLPNN 146 (758)
T ss_dssp TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEE----------TTEEEEEETTTCC----EEEECHHHHCCSCS
T ss_pred CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEc----------CCcceeEeCCCCe----EEEeccCCCCcCCC
Confidence 4578999999988752111 1111122333478888742 1267899999888 776521 2221
Q ss_pred CccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCC---CceEEEeeCC-eEEEEeCCCCcEEE
Q 016368 240 RFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWN---GPAASTMNEE-ELYVVNEGKGRLSK 314 (390)
Q Consensus 240 ~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~---~~~~~~~~~g-~lyv~gg~~~~v~~ 314 (390)
. -.+++.. +|.+++.. ......||+.+++++........... ..+++...++ .|++ |. .+.+++
T Consensus 147 ~----i~~i~~d~~g~lWigt-----~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi-gt-~~Gl~~ 215 (758)
T 3ott_A 147 T----IYSIIRTKDNQIYVGT-----YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWI-GT-EGYLFQ 215 (758)
T ss_dssp C----EEEEEECTTCCEEEEE-----TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEE-EE-EEEEEE
T ss_pred e----EEEEEEcCCCCEEEEe-----CCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEE-EE-CCCCeE
Confidence 1 1333333 67787752 23466899998888765431111111 1122221133 4565 43 347899
Q ss_pred EECCCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 315 YDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 315 yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
||+.+.++.....++.. ...++..- +|.|+|-. . ..++.+|..+
T Consensus 216 ~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT-~-~Gl~~~~~~~ 260 (758)
T 3ott_A 216 YFPSTGQIKQTEAFHNN-SIKSLALDGNGDLLAGT-D-NGLYVYHNDT 260 (758)
T ss_dssp EETTTTEEEEEEEEEEE-EEEEEEECTTCCEEEEE-T-TEEEEECCTT
T ss_pred EcCCCCeEEeccCCCCC-eEEEEEEcCCCCEEEEe-C-CceeEEecCC
Confidence 99999888766543321 11223332 56666643 2 3566666544
No 206
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.63 E-value=4.1 Score=40.79 Aligned_cols=106 Identities=16% Similarity=0.236 Sum_probs=59.9
Q ss_pred CCcEEEeCCCC--ceecCCCCCCC--------CcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEc
Q 016368 164 ASPLAFNPQSN--TWFFGPQLSIP--------RRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKK 233 (390)
Q Consensus 164 ~~~~~~dp~t~--~W~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~ 233 (390)
+.++.+|..|+ .|+.-...+.. ....+.++.+++||+... ...+..+|.+|++. .|+.-
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~---------dg~l~AlDa~TG~~--~W~~~ 148 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL---------DGRLEAIDAKTGQR--AWSVD 148 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---------TSEEEEEETTTCCE--EEEEE
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---------CCEEEEEECCCCCE--eeeec
Confidence 46888998877 58764332210 112234567899988542 13688999988763 38754
Q ss_pred cc-CCCCCccccceEEEEECCEEEEEcccCC--CCceeEEEeCCCCC--eEec
Q 016368 234 AQ-LKDGRFSREAVEAVGFKGNLCMVNLKGN--GAKDGAIYNVELDK--WKEM 281 (390)
Q Consensus 234 ~~-~~~~~~~r~~~~~~~~~g~lyv~gg~g~--~~~~~~~yd~~~~~--W~~~ 281 (390)
.. -+.... ....+.++.++++|+-.+.+. ....+..||.++++ |+.-
T Consensus 149 ~~~~~~~~~-~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 149 TRADHKRSY-TITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp CCSCTTSCC-BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CcCCCCCCc-cccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 32 111000 001234557999887532111 12356789998874 8753
No 207
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.58 E-value=1.4 Score=41.11 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=56.5
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCC-eEecCCCC-CCCCCCceEEEeeCC-eEEEEeCCCCcEEEEECCCCceEEcccc
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDK-WKEMPEGM-HAGWNGPAASTMNEE-ELYVVNEGKGRLSKYDADHDWWDEVIEL 328 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~-W~~~~~~~-~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd~~~~~W~~i~~~ 328 (390)
++.+++.++ ....+.+||+.+.. ...+.. . .......+++...++ .+++.|+.++.+.+||..+.. ..+..+
T Consensus 243 ~~~~l~s~~---~dg~i~i~d~~~~~~~~~~~~-~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~ 317 (430)
T 2xyi_A 243 HESLFGSVA---DDQKLMIWDTRNNNTSKPSHT-VDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSF 317 (430)
T ss_dssp CTTEEEEEE---TTSEEEEEETTCSCSSSCSEE-EECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEE
T ss_pred CCCEEEEEe---CCCeEEEEECCCCCCCcceeE-eecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEe
Confidence 455665531 24557789988652 111111 1 011111122221234 488899999999999987532 122222
Q ss_pred cccccce-eEEEE-CC-EEEEEeeCCceEEEEEcCC
Q 016368 329 AELKGAE-KITAA-RG-RVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 329 p~~r~~~-~~~~~-~g-~l~i~g~~~~~v~~~d~~~ 361 (390)
....... ++... ++ .+++.++.++.|.+||+..
T Consensus 318 ~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 318 ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 2222222 23333 33 5788877788999999976
No 208
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.55 E-value=2.7 Score=38.31 Aligned_cols=184 Identities=8% Similarity=-0.019 Sum_probs=93.1
Q ss_pred CCcEEEeCCCCcee-cCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWF-FGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~-~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+.+||..+.+-. .+........-.+++.. ++++++.|+.+. .+.+||..+.... .+.+..+.....
T Consensus 45 ~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------~v~vw~~~~~~~~--~~~~~~~~~h~~ 114 (416)
T 2pm9_A 45 SSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNG--------SLELYSTNEANNA--INSMARFSNHSS 114 (416)
T ss_dssp CCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSS--------CEEEECCSSTTSC--CCEEEECCCSSS
T ss_pred CeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCC--------eEEEeeccccccc--ccchhhccCCcc
Confidence 46889998876432 22222222122222222 566666666553 6788998872100 222222221111
Q ss_pred cccceEEEEE-C-CEEEEEcccCCCCceeEEEeCCCCC------eE-ecCCCCCCCCCCceEEEeeC-CeEEEEeCCCCc
Q 016368 242 SREAVEAVGF-K-GNLCMVNLKGNGAKDGAIYNVELDK------WK-EMPEGMHAGWNGPAASTMNE-EELYVVNEGKGR 311 (390)
Q Consensus 242 ~r~~~~~~~~-~-g~lyv~gg~g~~~~~~~~yd~~~~~------W~-~~~~~~~~~~~~~~~~~~~~-g~lyv~gg~~~~ 311 (390)
. ..+++.. + +.+++.|+ ....+.+||..+.+ -. .+...........+++...+ +.+++.++.++.
T Consensus 115 ~--v~~~~~~~~~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 189 (416)
T 2pm9_A 115 S--VKTVKFNAKQDNVLASGG---NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNF 189 (416)
T ss_dssp C--CCEEEECSSSTTBEEEEC---SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSC
T ss_pred c--eEEEEEcCCCCCEEEEEc---CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCC
Confidence 0 1233333 2 55555531 23457788887764 11 11110111112223333233 688899999999
Q ss_pred EEEEECCCCceEEccccccc----ccce-eEEEE-CC-EEEEEeeCCc---eEEEEEcCCC
Q 016368 312 LSKYDADHDWWDEVIELAEL----KGAE-KITAA-RG-RVCAVCENGE---RIMVVDVLAS 362 (390)
Q Consensus 312 v~~yd~~~~~W~~i~~~p~~----r~~~-~~~~~-~g-~l~i~g~~~~---~v~~~d~~~~ 362 (390)
+..||..+.+-...-..... .... .+... ++ .+++.+..+. .+.+||+.+.
T Consensus 190 v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 190 ASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 99999987654333222210 2222 33333 33 5777766665 8999999874
No 209
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.51 E-value=4 Score=40.23 Aligned_cols=187 Identities=11% Similarity=-0.060 Sum_probs=95.8
Q ss_pred CCcEEEeCCC------CceecCC-CCCCCCcceEEE-EECCEEEEEeccCCCCCCCccCeEEEEECC-CCccccccEEcc
Q 016368 164 ASPLAFNPQS------NTWFFGP-QLSIPRRWCAMG-SVGGVVYVASGVGAHYRGDVARSMKKWDLK-SDREDWKWEKKA 234 (390)
Q Consensus 164 ~~~~~~dp~t------~~W~~~~-~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~-t~~~~~~W~~~~ 234 (390)
..++++|..+ ++.+.+. .-. ......+ .-+|+..++...+.....-....++++|.. ++.. -..+.+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~-~~~~~l~ 237 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF-ADTRTLL 237 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE-EEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc-cccEEeC
Confidence 5799999988 6655554 211 1111111 225554444333221000123579999998 5630 0033333
Q ss_pred cCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCC-------CceEEEeeCCeEEEEe
Q 016368 235 QLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWN-------GPAASTMNEEELYVVN 306 (390)
Q Consensus 235 ~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~-------~~~~~~~~~g~lyv~g 306 (390)
.-.... ....+. -+|++|+.+..+ +...+..+|+.+++++.+... ..... ...++..-++++++.+
T Consensus 238 ~~~~~~----~~~~~~spdg~l~~~~~~~-~~~~l~~~~~~~~~~~~l~~~-~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 238 GGPEEA----IAQAEWAPDGSLIVATDRT-GWWNLHRVDPATGAATQLCRR-EEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp EETTBC----EEEEEECTTSCEEEEECTT-SSCEEEEECTTTCCEEESSCC-SSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred CCCCce----EcceEECCCCeEEEEECCC-CCeEEEEEECCCCceeecccc-cccccCccccccCceEeEeCCCEEEEEE
Confidence 211111 122332 378877775221 233677889888888877542 11110 1223321378888887
Q ss_pred CCCC--cEEEEECCCCceEEcccccccccceeE-EEECCEEEEEeeCC---ceEEEEEcCCC
Q 016368 307 EGKG--RLSKYDADHDWWDEVIELAELKGAEKI-TAARGRVCAVCENG---ERIMVVDVLAS 362 (390)
Q Consensus 307 g~~~--~v~~yd~~~~~W~~i~~~p~~r~~~~~-~~~~g~l~i~g~~~---~~v~~~d~~~~ 362 (390)
.. + .++.+|..+...+.+..- ......+ ..-++.++++.... ..++.+|+.+.
T Consensus 312 ~~-~~~~l~~~d~~~~~~~~l~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 312 GK-GAAVLGILDPESGELVDAAGP--WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp BS-SSCEEEEEETTTTEEEECCSS--CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred Ec-CccEEEEEECCCCcEEEecCC--CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 66 5 678889887776665421 1111223 33466776665432 26788887654
No 210
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=94.43 E-value=2.1 Score=37.75 Aligned_cols=147 Identities=7% Similarity=-0.051 Sum_probs=78.0
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEccc-CCCCCccccceEEEE-ECCE-EEEEcccCCCCceeEEE
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQ-LKDGRFSREAVEAVG-FKGN-LCMVNLKGNGAKDGAIY 271 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~-~~~~~~~r~~~~~~~-~~g~-lyv~gg~g~~~~~~~~y 271 (390)
++.+++.|+.+. .+.+||..+... -..+.. ...... ..+++. -+++ +++.|+ ....+.+|
T Consensus 22 ~~~~l~~~~~d~--------~v~iw~~~~~~~---~~~~~~~~~~~~~---v~~~~~~~~~~~~l~~~~---~dg~i~~w 84 (342)
T 1yfq_A 22 SKSLLLITSWDG--------SLTVYKFDIQAK---NVDLLQSLRYKHP---LLCCNFIDNTDLQIYVGT---VQGEILKV 84 (342)
T ss_dssp GGTEEEEEETTS--------EEEEEEEETTTT---EEEEEEEEECSSC---EEEEEEEESSSEEEEEEE---TTSCEEEE
T ss_pred CCCEEEEEcCCC--------eEEEEEeCCCCc---cccceeeeecCCc---eEEEEECCCCCcEEEEEc---CCCeEEEE
Confidence 455566665543 677888766540 011111 111111 123333 3677 555542 23457889
Q ss_pred eC-CCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc-------eEEcccccccccceeEEEECCE
Q 016368 272 NV-ELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW-------WDEVIELAELKGAEKITAARGR 343 (390)
Q Consensus 272 d~-~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~-------W~~i~~~p~~r~~~~~~~~~g~ 343 (390)
|. .+.+-..+.. ......-..+.. ..+.+++.++.++.+..||..+.. .+.+..+.......++....+.
T Consensus 85 d~~~~~~~~~~~~-~~~~~~v~~l~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 85 DLIGSPSFQALTN-NEANLGICRICK-YGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR 162 (342)
T ss_dssp CSSSSSSEEECBS-CCCCSCEEEEEE-ETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE
T ss_pred EeccCCceEeccc-cCCCCceEEEEe-CCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc
Confidence 99 8876655433 111112223332 227788888889999999876400 2223333322223344444555
Q ss_pred EEEEeeCCceEEEEEcCC
Q 016368 344 VCAVCENGERIMVVDVLA 361 (390)
Q Consensus 344 l~i~g~~~~~v~~~d~~~ 361 (390)
++++..+..+.+||+.+
T Consensus 163 -l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp -EEEEESTTEEEEEESSC
T ss_pred -EEEEeCCCeEEEEECCc
Confidence 55657777999999987
No 211
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.38 E-value=1.6 Score=43.76 Aligned_cols=119 Identities=16% Similarity=0.246 Sum_probs=72.1
Q ss_pred EEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC-----ccccceEEEEECCEEEEEcccCCCC
Q 016368 191 MGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR-----FSREAVEAVGFKGNLCMVNLKGNGA 265 (390)
Q Consensus 191 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~-----~~r~~~~~~~~~g~lyv~gg~g~~~ 265 (390)
-++.++.||+.... ..+..+|..|++. .|+.-...+... +.....+.++.++++|+.. ..
T Consensus 73 P~v~~g~vyv~~~~---------~~v~AlD~~tG~~--~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~----~d 137 (677)
T 1kb0_A 73 PVVVDGIMYVSASW---------SVVHAIDTRTGNR--IWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA----WD 137 (677)
T ss_dssp CEEETTEEEEECGG---------GCEEEEETTTTEE--EEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC----TT
T ss_pred CEEECCEEEEECCC---------CeEEEEECCCCcE--EEEEcCCCCccccccccccCCCCCceEECCEEEEEc----CC
Confidence 45679999997542 3688999988763 487654432110 0000133556899999874 34
Q ss_pred ceeEEEeCCCC--CeEecCC-CCCCC-CCCceEEEeeCCeEEEEeCC-----CCcEEEEECCCCc--eEEc
Q 016368 266 KDGAIYNVELD--KWKEMPE-GMHAG-WNGPAASTMNEEELYVVNEG-----KGRLSKYDADHDW--WDEV 325 (390)
Q Consensus 266 ~~~~~yd~~~~--~W~~~~~-~~~~~-~~~~~~~~~~~g~lyv~gg~-----~~~v~~yd~~~~~--W~~i 325 (390)
..+.++|.+++ .|+.-.. ..... ......++ .++.+|+..+. ++.++.||.++.+ |+.-
T Consensus 138 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 138 GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 55788999876 5886432 11111 11223333 68888876542 5689999998765 7653
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.36 E-value=0.57 Score=41.33 Aligned_cols=140 Identities=7% Similarity=-0.010 Sum_probs=77.6
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
++.||++.... ..+.+||+.++. -+... .+.. ..+++. -+|++|+. ....+.+||+
T Consensus 24 ~~~l~~~d~~~--------~~i~~~d~~~~~----~~~~~-~~~~-----~~~i~~~~dG~l~v~-----~~~~l~~~d~ 80 (297)
T 3g4e_A 24 SNSLLFVDIPA--------KKVCRWDSFTKQ----VQRVT-MDAP-----VSSVALRQSGGYVAT-----IGTKFCALNW 80 (297)
T ss_dssp TTEEEEEETTT--------TEEEEEETTTCC----EEEEE-CSSC-----EEEEEEBTTSSEEEE-----ETTEEEEEET
T ss_pred CCEEEEEECCC--------CEEEEEECCCCc----EEEEe-CCCc-----eEEEEECCCCCEEEE-----ECCeEEEEEC
Confidence 46788875433 478999999887 43332 2211 123333 36777765 3456789999
Q ss_pred CCCCeEecCCCCCC-CCC-CceEEEeeCCeEEEEeC-----------CCCcEEEEECCCCceEEcccccccccceeEEEE
Q 016368 274 ELDKWKEMPEGMHA-GWN-GPAASTMNEEELYVVNE-----------GKGRLSKYDADHDWWDEVIELAELKGAEKITAA 340 (390)
Q Consensus 274 ~~~~W~~~~~~~~~-~~~-~~~~~~~~~g~lyv~gg-----------~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~ 340 (390)
++++++.+...... +.. ...+++..+|++|+... ..+.++++|+.. +...+.. ......+++..
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~--~~~~pngi~~s 157 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD--QVDISNGLDWS 157 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE--EESBEEEEEEC
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee--ccccccceEEc
Confidence 99888765431111 111 11233235788887542 123789998763 3333221 11222345444
Q ss_pred -CC-EEEEEeeCCceEEEEEcC
Q 016368 341 -RG-RVCAVCENGERIMVVDVL 360 (390)
Q Consensus 341 -~g-~l~i~g~~~~~v~~~d~~ 360 (390)
++ .+|+.....+.|+++|+.
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d 179 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYD 179 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEecCCCCcEEEEecc
Confidence 34 577775556678888763
No 213
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.34 E-value=2.7 Score=40.47 Aligned_cols=141 Identities=6% Similarity=0.047 Sum_probs=74.8
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
+++.++.|+.+. .+.+||..... -..+...... ..+++. -++++.+.++ ....+.+||.
T Consensus 396 dg~~l~~~~~d~--------~v~~~~~~~~~----~~~~~~~~~~-----v~~~~~s~d~~~l~~~~---~d~~v~~w~~ 455 (577)
T 2ymu_A 396 DGQTIASASDDK--------TVKLWNRNGQL----LQTLTGHSSS-----VWGVAFSPDDQTIASAS---DDKTVKLWNR 455 (577)
T ss_dssp TSSCEEEEETTS--------EEEEECTTCCE----EEEEECCSSC-----EEEEEECTTSSEEEEEE---TTSEEEEEET
T ss_pred CCCEEEEEeCCC--------EEEEEeCCCCE----EEEecCCCCC-----eEEEEECCCCCEEEEEc---CCCEEEEEEC
Confidence 566666666543 67788854433 2222211111 122332 2566655531 2345678887
Q ss_pred CCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccce-eEEEE-CCEEEEEeeCC
Q 016368 274 ELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAE-KITAA-RGRVCAVCENG 351 (390)
Q Consensus 274 ~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~ 351 (390)
....-..+.. ......+++...++++++.++.++.+..||..... +..+....... +++.. +|++++.++.+
T Consensus 456 ~~~~~~~~~~---~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~---~~~~~~h~~~v~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 456 NGQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL---LQTLTGHSSSVRGVAFSPDGQTIASASDD 529 (577)
T ss_dssp TSCEEEEEEC---CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSCE---EEEEECCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCE---EEEEeCCCCCEEEEEEcCCCCEEEEEECc
Confidence 6544333322 11111233333588999999889999999965432 22222222222 23332 67777777777
Q ss_pred ceEEEEEcCC
Q 016368 352 ERIMVVDVLA 361 (390)
Q Consensus 352 ~~v~~~d~~~ 361 (390)
..|.+||...
T Consensus 530 g~v~lwd~~~ 539 (577)
T 2ymu_A 530 KTVKLWNRNG 539 (577)
T ss_dssp SEEEEECTTS
T ss_pred CEEEEEeCCC
Confidence 7899999643
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.32 E-value=1.1 Score=40.04 Aligned_cols=138 Identities=12% Similarity=0.082 Sum_probs=78.9
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEE-EECCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAV-GFKGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~-~~~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
++.+|+++... ..+++||+.++. .+... .+.. ..+.+ .-+|++++.. ...+.+||+
T Consensus 60 ~~~l~~~d~~~--------~~i~~~d~~~~~----~~~~~-~~~~-----v~~i~~~~dg~l~v~~-----~~gl~~~d~ 116 (326)
T 2ghs_A 60 SGTAWWFNILE--------RELHELHLASGR----KTVHA-LPFM-----GSALAKISDSKQLIAS-----DDGLFLRDT 116 (326)
T ss_dssp TTEEEEEEGGG--------TEEEEEETTTTE----EEEEE-CSSC-----EEEEEEEETTEEEEEE-----TTEEEEEET
T ss_pred CCEEEEEECCC--------CEEEEEECCCCc----EEEEE-CCCc-----ceEEEEeCCCeEEEEE-----CCCEEEEEC
Confidence 36788876443 378999998876 54432 2221 12233 3578888763 334788999
Q ss_pred CCCCeEecCCCCCCCCC---CceEEEeeCCeEEEEeCC------CCcEEEEECCCCceEEcccccccccceeEEEE-CC-
Q 016368 274 ELDKWKEMPEGMHAGWN---GPAASTMNEEELYVVNEG------KGRLSKYDADHDWWDEVIELAELKGAEKITAA-RG- 342 (390)
Q Consensus 274 ~~~~W~~~~~~~~~~~~---~~~~~~~~~g~lyv~gg~------~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g- 342 (390)
.+++.+.+.. ...... ...+++..+|++|+.... .+.+++|| +.+...+.. ......+++.. +|
T Consensus 117 ~~g~~~~~~~-~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 117 ATGVLTLHAE-LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGT 191 (326)
T ss_dssp TTCCEEEEEC-SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSC
T ss_pred CCCcEEEEee-CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCC
Confidence 9888876543 211111 112332357888875421 24799999 355544421 11122344443 44
Q ss_pred EEEEEeeCCceEEEEEcC
Q 016368 343 RVCAVCENGERIMVVDVL 360 (390)
Q Consensus 343 ~l~i~g~~~~~v~~~d~~ 360 (390)
.+|+.......|+++|+.
T Consensus 192 ~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEETTTCEEEEEEBC
T ss_pred EEEEEECCCCEEEEEEcc
Confidence 577775556789999875
No 215
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.28 E-value=1.5 Score=40.59 Aligned_cols=108 Identities=6% Similarity=0.037 Sum_probs=59.1
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEccccccc
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAEL 331 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~ 331 (390)
++.+.+.|+ ....+.+||+.+.+-...-...+......+++...++.+++.|+.++.+..||..+......-.++..
T Consensus 181 ~~~~l~~~~---~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (437)
T 3gre_A 181 EKSLLVALT---NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDH 257 (437)
T ss_dssp SCEEEEEEE---TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTC
T ss_pred CCCEEEEEe---CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCC
Confidence 456666542 23457789998765322111011111112223224788889999999999999987544332221211
Q ss_pred ccceeEEEE-----CCEEEEEeeCCceEEEEEcCCC
Q 016368 332 KGAEKITAA-----RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 332 r~~~~~~~~-----~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.....+... ++.+++.|+.+..|.+||+.+.
T Consensus 258 ~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 258 APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 111122111 3556666666778999999765
No 216
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.26 E-value=4.9 Score=40.16 Aligned_cols=184 Identities=10% Similarity=-0.005 Sum_probs=95.3
Q ss_pred CCcEEEeCCCCcee--cCCCCC-CCCcceEEEEE-CCE-EEEEeccCCCCCCCccCeEEEEECCC------C--cccccc
Q 016368 164 ASPLAFNPQSNTWF--FGPQLS-IPRRWCAMGSV-GGV-VYVASGVGAHYRGDVARSMKKWDLKS------D--REDWKW 230 (390)
Q Consensus 164 ~~~~~~dp~t~~W~--~~~~~~-~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t------~--~~~~~W 230 (390)
..+++++..+.+.. .+-..+ .+......... +++ |++...... .....++++|..+ . . +
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~~l~~~d~~~~~~~~~~~~~----~ 279 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC----DPVNRLWYCDLQQESNGITGILK----W 279 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS----SSCCEEEEEEGGGSSSSSCSSCC----C
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC----CCccEEEEEECcccccccCCccc----e
Confidence 45888898887643 111111 12222222222 454 444433221 1256899999876 4 5 7
Q ss_pred EEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCC---CeEecCCCCCCCCCCceEEEee-CCeEEEEe
Q 016368 231 EKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELD---KWKEMPEGMHAGWNGPAASTMN-EEELYVVN 306 (390)
Q Consensus 231 ~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~---~W~~~~~~~~~~~~~~~~~~~~-~g~lyv~g 306 (390)
+.+..-.... .......++.+|+.+..+.....+.++|+.+. .|+.+...... ..-..+.. . ++.|++..
T Consensus 280 ~~l~~~~~~~----~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~~~~~~~-~~~~~lv~~~ 353 (710)
T 2xdw_A 280 VKLIDNFEGE----YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK-DVLEWVAC-VRSNFLVLCY 353 (710)
T ss_dssp EEEECSSSSC----EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS-CEEEEEEE-ETTTEEEEEE
T ss_pred EEeeCCCCcE----EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC-CeEEEEEE-EcCCEEEEEE
Confidence 7665432221 12233346778888533222345778898775 58877552211 11122333 4 78888877
Q ss_pred CCCC--cEEEEECCCCc-eEEcccccccccceeEEEE-CC-EEEEEeeC---CceEEEEEcCCCC
Q 016368 307 EGKG--RLSKYDADHDW-WDEVIELAELKGAEKITAA-RG-RVCAVCEN---GERIMVVDVLASP 363 (390)
Q Consensus 307 g~~~--~v~~yd~~~~~-W~~i~~~p~~r~~~~~~~~-~g-~l~i~g~~---~~~v~~~d~~~~~ 363 (390)
..++ .++++|..+++ ...+. .+ .....++... ++ .+++.... -..++.+|+.+..
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~-~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFP-LE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEEC-CC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EECCEEEEEEEECCCCCEEEecC-CC-CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 6565 78999985554 34433 22 1111222222 33 55554333 2479999987654
No 217
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.17 E-value=4.6 Score=40.18 Aligned_cols=146 Identities=10% Similarity=0.105 Sum_probs=78.1
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
++++.+.|+.+. .+.+||..+.. -...-.-.... -.+++. .+++..+.|+ ....+.++|.
T Consensus 441 ~g~~l~sgs~Dg--------~v~vwd~~~~~----~~~~~~~h~~~----v~~~~~s~~~~~l~s~s---~D~~i~iwd~ 501 (694)
T 3dm0_A 441 DGQFALSGSWDG--------ELRLWDLAAGV----STRRFVGHTKD----VLSVAFSLDNRQIVSAS---RDRTIKLWNT 501 (694)
T ss_dssp TSSEEEEEETTS--------EEEEEETTTTE----EEEEEECCSSC----EEEEEECTTSSCEEEEE---TTSCEEEECT
T ss_pred CCCEEEEEeCCC--------cEEEEECCCCc----ceeEEeCCCCC----EEEEEEeCCCCEEEEEe---CCCEEEEEEC
Confidence 567777777664 78899998875 22111111111 122332 2455444431 2345667887
Q ss_pred CCCCeEecCCCCCCCCCCc--eEEEeeCC--eEEEEeCCCCcEEEEECCCCceEEccccccccccee-EEEE-CCEEEEE
Q 016368 274 ELDKWKEMPEGMHAGWNGP--AASTMNEE--ELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEK-ITAA-RGRVCAV 347 (390)
Q Consensus 274 ~~~~W~~~~~~~~~~~~~~--~~~~~~~g--~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~-~~~~-~g~l~i~ 347 (390)
....=..+.. ...+.... ++....++ .+++.|+.++.+..||..+..-.. .+..+..... +... ++++++.
T Consensus 502 ~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~--~~~~h~~~v~~v~~spdg~~l~s 578 (694)
T 3dm0_A 502 LGECKYTISE-GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS--TLAGHTGYVSTVAVSPDGSLCAS 578 (694)
T ss_dssp TSCEEEEECS-STTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCcceeecc-CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE--EEcCCCCCEEEEEEeCCCCEEEE
Confidence 5543222222 11122211 22221233 467788889999999998754332 2222333233 3333 6778888
Q ss_pred eeCCceEEEEEcCCC
Q 016368 348 CENGERIMVVDVLAS 362 (390)
Q Consensus 348 g~~~~~v~~~d~~~~ 362 (390)
|+.+..|.+||+.+.
T Consensus 579 g~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEG 593 (694)
T ss_dssp EETTSBCEEEETTTT
T ss_pred EeCCCeEEEEECCCC
Confidence 787889999998765
No 218
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.10 E-value=1.4 Score=43.01 Aligned_cols=178 Identities=12% Similarity=-0.013 Sum_probs=93.3
Q ss_pred CCCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC
Q 016368 163 LASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR 240 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~ 240 (390)
.+.+.++|+.+++-... ++....-|..+.. +..+|+.+ .+ ..+.+||+.+.+ -+.+...+...
T Consensus 176 ~~~V~viD~~t~~v~~~--i~~g~~p~~v~~SpDGr~lyv~~-~d--------g~V~viD~~~~t----~~~v~~i~~G~ 240 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTV--LDTGYAVHISRLSASGRYLFVIG-RD--------GKVNMIDLWMKE----PTTVAEIKIGS 240 (567)
T ss_dssp TTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSCEEEEEE-TT--------SEEEEEETTSSS----CCEEEEEECCS
T ss_pred CCeEEEEECCCCeEEEE--EeCCCCccceEECCCCCEEEEEc-CC--------CeEEEEECCCCC----CcEeEEEecCC
Confidence 46899999998855421 1222222333333 34678754 22 379999996223 23343333322
Q ss_pred ccccceEEEEE-----CC-EEEEEcccCCCCceeEEEeCCCCCeEe-cCCC-CC--------CCCCCceEEEeeCCeEEE
Q 016368 241 FSREAVEAVGF-----KG-NLCMVNLKGNGAKDGAIYNVELDKWKE-MPEG-MH--------AGWNGPAASTMNEEELYV 304 (390)
Q Consensus 241 ~~r~~~~~~~~-----~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~-~~--------~~~~~~~~~~~~~g~lyv 304 (390)
. ...+++. +| .+|+. ++....+.++|..+.+=.. ++.. ++ .++. ..++...++..++
T Consensus 241 ~---P~~ia~s~~~~pDGk~l~v~---n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv-a~i~~s~~~~~~v 313 (567)
T 1qks_A 241 E---ARSIETSKMEGWEDKYAIAG---AYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV-AAILASHYRPEFI 313 (567)
T ss_dssp E---EEEEEECCSTTCTTTEEEEE---EEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE-EEEEECSSSSEEE
T ss_pred C---CceeEEccccCCCCCEEEEE---EccCCeEEEEECCCCcEEEEEeccccccccccccCCCce-EEEEEcCCCCEEE
Confidence 2 1334444 56 46665 2234566789977654222 2210 11 1111 1222223444444
Q ss_pred Ee-CCCCcEEEEECCCCceEEcccccccccceeEEEE-CCE-EEEEeeCCceEEEEEcCCC
Q 016368 305 VN-EGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR-VCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 305 ~g-g~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~-l~i~g~~~~~v~~~d~~~~ 362 (390)
+. ...+.++..|........+..++..+..+.+..- +|+ +|+.....+.|.++|..+.
T Consensus 314 v~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 314 VNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp EEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred EEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 43 4557999999987766666655555555544433 455 4444344568889998875
No 219
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.06 E-value=3.5 Score=40.25 Aligned_cols=220 Identities=7% Similarity=-0.046 Sum_probs=106.3
Q ss_pred eeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee-cCeEEEEEeecCCCCCCCCCcEEEeCC--CCce
Q 016368 100 MEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV-RNNLVLIAATTPHFLPALASPLAFNPQ--SNTW 176 (390)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~~~~dp~--t~~W 176 (390)
..+.++|+.+++-...-+... ..+ ..+.. +++.+|+++. .+.+.+||+. +.+
T Consensus 177 ~~V~viD~~t~~v~~~i~~g~--~p~---------------~v~~SpDGr~lyv~~~-------dg~V~viD~~~~t~~- 231 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDTGY--AVH---------------ISRLSASGRYLFVIGR-------DGKVNMIDLWMKEPT- 231 (567)
T ss_dssp TEEEEEETTTCCEEEEEECSS--CEE---------------EEEECTTSCEEEEEET-------TSEEEEEETTSSSCC-
T ss_pred CeEEEEECCCCeEEEEEeCCC--Ccc---------------ceEECCCCCEEEEEcC-------CCeEEEEECCCCCCc-
Confidence 468889998875543111211 111 22223 4555555532 2479999985 443
Q ss_pred ecCCCCCCCCcceEEEEE-----CC-EEEEEeccCCCCCCCccCeEEEEECCCCccccccEE-ccc--CCCC-----Ccc
Q 016368 177 FFGPQLSIPRRWCAMGSV-----GG-VVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEK-KAQ--LKDG-----RFS 242 (390)
Q Consensus 177 ~~~~~~~~~r~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~-~~~--~~~~-----~~~ 242 (390)
.+...+....-..+++. +| .+|+..-.. ..+.++|..|.+ =.. ++. ++.. ..+
T Consensus 232 -~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~--------~~v~ViD~~t~~----~~~~i~~~~~~~~~~~~~p~~ 298 (567)
T 1qks_A 232 -TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWP--------PQYVIMDGETLE----PKKIQSTRGMTYDEQEYHPEP 298 (567)
T ss_dssp -EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEET--------TEEEEEETTTCC----EEEEEECCEECTTTCCEESCC
T ss_pred -EeEEEecCCCCceeEEccccCCCCCEEEEEEccC--------CeEEEEECCCCc----EEEEEeccccccccccccCCC
Confidence 22222222222334443 45 567664332 477889977755 111 211 1100 000
Q ss_pred ccceEEE-EECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeE-EEEeCCCCcEEEEECCCC
Q 016368 243 REAVEAV-GFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEEL-YVVNEGKGRLSKYDADHD 320 (390)
Q Consensus 243 r~~~~~~-~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~l-yv~gg~~~~v~~yd~~~~ 320 (390)
|. .+++ ..++..+++.- .....+.+.|........+.. .+.++..+......+|+. |+....++.+.++|.++.
T Consensus 299 rv-a~i~~s~~~~~~vv~~--~~~g~v~~vd~~~~~~~~v~~-i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 299 RV-AAILASHYRPEFIVNV--KETGKILLVDYTDLNNLKTTE-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp CE-EEEEECSSSSEEEEEE--TTTTEEEEEETTCSSEEEEEE-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred ce-EEEEEcCCCCEEEEEe--cCCCeEEEEecCCCccceeee-eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 11 1222 12334444421 123456677776655433333 333333334443245554 444545678999999987
Q ss_pred ceEE---c-ccccccccceeEEEE-CCEEEEEeeC-CceEEEEEcCC
Q 016368 321 WWDE---V-IELAELKGAEKITAA-RGRVCAVCEN-GERIMVVDVLA 361 (390)
Q Consensus 321 ~W~~---i-~~~p~~r~~~~~~~~-~g~l~i~g~~-~~~v~~~d~~~ 361 (390)
+=.. + ...|.+.....+..- ++.+|+.+.. .+.|.++|...
T Consensus 375 kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred cEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 5332 2 233433222223222 4678877643 36788888765
No 220
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.02 E-value=3.2 Score=37.13 Aligned_cols=161 Identities=10% Similarity=0.145 Sum_probs=81.5
Q ss_pred CCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC-CCCccccceEEE
Q 016368 172 QSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK-DGRFSREAVEAV 249 (390)
Q Consensus 172 ~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~-~~~~~r~~~~~~ 249 (390)
...+|+.+.. +......++... .+.+|++|. .. .++..+-.-.+ |+.+.... .... ...+++
T Consensus 23 ~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~-~g--------~i~~s~DgG~t----W~~~~~~~~~~~~--~~~~i~ 86 (327)
T 2xbg_A 23 DYNPWEAIQL-PTTATILDMSFIDRHHGWLVGV-NA--------TLMETRDGGQT----WEPRTLVLDHSDY--RFNSVS 86 (327)
T ss_dssp SSCCEEEEEC-SCSSCEEEEEESSSSCEEEEET-TT--------EEEEESSTTSS----CEECCCCCSCCCC--EEEEEE
T ss_pred CCCCceEeec-CCCCcEEEEEECCCCcEEEEcC-CC--------eEEEeCCCCCC----CeECCCCCCCCCc--cEEEEE
Confidence 3457877652 222222333333 467888653 21 23222222346 99886421 1111 024455
Q ss_pred EECCEEEEEcccCCCCceeEEEeCC--CCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEccc
Q 016368 250 GFKGNLCMVNLKGNGAKDGAIYNVE--LDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIE 327 (390)
Q Consensus 250 ~~~g~lyv~gg~g~~~~~~~~yd~~--~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~ 327 (390)
..++.+|++|-. ..+|-.. -.+|+.+......+.....++..-++.+|+.+. .+.+++-+-...+|+++..
T Consensus 87 ~~~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~ 159 (327)
T 2xbg_A 87 FQGNEGWIVGEP------PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQ 159 (327)
T ss_dssp EETTEEEEEEET------TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEEC
T ss_pred ecCCeEEEEECC------CeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeec
Confidence 567788888411 2344333 469999875221211122333225688888775 5567665545678999864
Q ss_pred ccccccceeEEEE-CCEEEEEeeCCceEEEE
Q 016368 328 LAELKGAEKITAA-RGRVCAVCENGERIMVV 357 (390)
Q Consensus 328 ~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~ 357 (390)
.. ....+.+... ++.+++++..+ .++.-
T Consensus 160 ~~-~~~~~~~~~~~~~~~~~~g~~G-~~~~S 188 (327)
T 2xbg_A 160 EA-IGVMRNLNRSPSGEYVAVSSRG-SFYST 188 (327)
T ss_dssp SC-CCCEEEEEECTTSCEEEEETTS-SEEEE
T ss_pred CC-CcceEEEEEcCCCcEEEEECCC-cEEEE
Confidence 22 2223344433 56777775433 44443
No 221
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=94.01 E-value=0.018 Score=56.70 Aligned_cols=31 Identities=10% Similarity=0.284 Sum_probs=28.0
Q ss_pred CCCcHHHHHHHHhcC-C---chhhHhhhHhHHHhh
Q 016368 35 PGLPNHLADRCLSSL-P---PALLFSVCHSWRRLL 65 (390)
Q Consensus 35 ~~LP~dl~~~iL~rL-P---l~~~r~Vck~W~~l~ 65 (390)
..||||++.+||.+| | +.+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 469999999999999 6 788889999999884
No 222
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.00 E-value=3.2 Score=37.01 Aligned_cols=164 Identities=10% Similarity=0.065 Sum_probs=80.1
Q ss_pred CcEEEeCCCCceecCCCCCC--CCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC
Q 016368 165 SPLAFNPQSNTWFFGPQLSI--PRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR 240 (390)
Q Consensus 165 ~~~~~dp~t~~W~~~~~~~~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~ 240 (390)
.+++||+.+++.+.+..... +........+ +|++|+....... ......+++|| +++ .+.+..-. .
T Consensus 110 gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~--~~~~~~l~~~~--~g~----~~~~~~~~-~- 179 (326)
T 2ghs_A 110 GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA--ETGAGSIYHVA--KGK----VTKLFADI-S- 179 (326)
T ss_dssp EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC--CTTCEEEEEEE--TTE----EEEEEEEE-S-
T ss_pred CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC--CCCceEEEEEe--CCc----EEEeeCCC-c-
Confidence 58999999988776543321 1112222222 6778774322110 12334788888 455 44432110 0
Q ss_pred ccccceEEEEE-CC-EEEEEcccCCCCceeEEEeCC--CC-C------eEecCCCCCCCCCCceEEEeeCCeEEEEeCCC
Q 016368 241 FSREAVEAVGF-KG-NLCMVNLKGNGAKDGAIYNVE--LD-K------WKEMPEGMHAGWNGPAASTMNEEELYVVNEGK 309 (390)
Q Consensus 241 ~~r~~~~~~~~-~g-~lyv~gg~g~~~~~~~~yd~~--~~-~------W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~ 309 (390)
. ..+.+.. +| .+|+.. .....+.+||.. ++ + +..... .......++...+|.||+.....
T Consensus 180 ~---~~~i~~s~dg~~lyv~~---~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~---~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 180 I---PNSICFSPDGTTGYFVD---TKVNRLMRVPLDARTGLPTGKAEVFIDSTG---IKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp S---EEEEEECTTSCEEEEEE---TTTCEEEEEEBCTTTCCBSSCCEEEEECTT---SSSEEEEEEECTTSCEEEEEETT
T ss_pred c---cCCeEEcCCCCEEEEEE---CCCCEEEEEEcccccCCcccCceEEEECCC---CCCCCCeeEECCCCCEEEEEeCC
Confidence 1 1233332 45 577772 123467788875 43 2 222211 01111233433468888876555
Q ss_pred CcEEEEECCCCceEEcccccccccceeEEEE---CCEEEEEee
Q 016368 310 GRLSKYDADHDWWDEVIELAELKGAEKITAA---RGRVCAVCE 349 (390)
Q Consensus 310 ~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~---~g~l~i~g~ 349 (390)
+.+.+||++...-..+. ++. ....+++.. ++.|||...
T Consensus 251 ~~v~~~d~~g~~~~~i~-~~~-~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 251 GAVDRYDTDGNHIARYE-VPG-KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp TEEEEECTTCCEEEEEE-CSC-SBEEEEEEESTTSCEEEEEEB
T ss_pred CEEEEECCCCCEEEEEE-CCC-CCcEEEEEecCCCCEEEEEec
Confidence 68999999644333332 222 122233332 246777653
No 223
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=94.00 E-value=1.2 Score=43.26 Aligned_cols=130 Identities=15% Similarity=0.045 Sum_probs=72.1
Q ss_pred EEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEccc-CCCCceeEEEeCCCCCeEecCCCCCCCCCCceEE
Q 016368 217 KKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLK-GNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAAS 295 (390)
Q Consensus 217 ~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~-g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 295 (390)
.+||..++. -+.+...+. . .....-+|+..+++.. +.+...+.++|+++++++.+.. .... ....+
T Consensus 135 ~l~d~~~g~----~~~l~~~~~--~----~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~-~~~~--~~~~~ 201 (582)
T 3o4h_A 135 ALYALDGGG----LRELARLPG--F----GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDS-GEGS--FSSAS 201 (582)
T ss_dssp EEEEEETTE----EEEEEEESS--C----EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECC-SSCE--EEEEE
T ss_pred eEEEccCCc----EEEeecCCC--c----eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeec-CCCc--cccce
Confidence 388998887 666554332 1 2233356665554322 1112457789999998887754 2111 12222
Q ss_pred EeeCCeEEEEeCCCC--cEEEEECCCCceEEccccccccccee-------EEEECCEEEEEeeCCceEEEEEc
Q 016368 296 TMNEEELYVVNEGKG--RLSKYDADHDWWDEVIELAELKGAEK-------ITAARGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 296 ~~~~g~lyv~gg~~~--~v~~yd~~~~~W~~i~~~p~~r~~~~-------~~~~~g~l~i~g~~~~~v~~~d~ 359 (390)
...||+.++....++ .+++||.++.+...+......-.... ...-+|++++.+..+..+.+|++
T Consensus 202 ~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 202 ISPGMKVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTSCEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ECCCCCEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 236777666655566 89999999888773322111000000 02235677776655667777776
No 224
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.93 E-value=1.2 Score=39.13 Aligned_cols=133 Identities=14% Similarity=0.059 Sum_probs=67.0
Q ss_pred eEEEEECCCCccccccEEcccCCCCC-ccccceEEEE-ECC-EEEEEcccCCCCceeEEEeCCCCCeEe-cCCCCCC--C
Q 016368 215 SMKKWDLKSDREDWKWEKKAQLKDGR-FSREAVEAVG-FKG-NLCMVNLKGNGAKDGAIYNVELDKWKE-MPEGMHA--G 288 (390)
Q Consensus 215 ~~~~yd~~t~~~~~~W~~~~~~~~~~-~~r~~~~~~~-~~g-~lyv~gg~g~~~~~~~~yd~~~~~W~~-~~~~~~~--~ 288 (390)
.+.+||..+.+ -...-..+... . ...++. -+| .+|+.+ .....+.++|+.+.+-.. +....+. .
T Consensus 12 ~v~~~d~~~~~----~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~---~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 12 KLVVIDTEKMA----VDKVITIADAGPT---PMVPMVAPGGRIAYATV---NKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEETTTTE----EEEEEECTTCTTC---CCCEEECTTSSEEEEEE---TTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred eEEEEECCCCc----EEEEEEcCCCCCC---ccceEEcCCCCEEEEEe---CCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 78899998876 33222222210 0 122332 355 577763 124567899998876432 2210100 0
Q ss_pred CCCceEEEeeCC-eEEEEeC-----------CCCcEEEEECCCCceEEcccccccccceeEEEE-CCE-EEEEeeCCceE
Q 016368 289 WNGPAASTMNEE-ELYVVNE-----------GKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR-VCAVCENGERI 354 (390)
Q Consensus 289 ~~~~~~~~~~~g-~lyv~gg-----------~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~-l~i~g~~~~~v 354 (390)
.....++...+| .||+... .++.+.+||.++.+....-.. ......+... +|+ ||+. +..+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~---~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL---GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE---SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe---CCeE
Confidence 012233332456 5666531 357999999987654432222 2222334433 444 5554 3578
Q ss_pred EEEEcCCC
Q 016368 355 MVVDVLAS 362 (390)
Q Consensus 355 ~~~d~~~~ 362 (390)
.++|+.+.
T Consensus 157 ~~~d~~~~ 164 (337)
T 1pby_B 157 HVMDPEAG 164 (337)
T ss_dssp EEEETTTT
T ss_pred EEEECCCC
Confidence 88887654
No 225
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.90 E-value=3.3 Score=40.83 Aligned_cols=164 Identities=10% Similarity=-0.054 Sum_probs=87.7
Q ss_pred cCeEEEEEeecCCCCC-CCCCcEEEeCC-CC---ceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEE
Q 016368 146 RNNLVLIAATTPHFLP-ALASPLAFNPQ-SN---TWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKW 219 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~-~~~~~~~~dp~-t~---~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~y 219 (390)
+++.+++......... ...+++++|.. ++ +.+.+..-. .......+.. +|++|+.+..+. ...++++
T Consensus 198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~~------~~~l~~~ 270 (662)
T 3azo_A 198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIVATDRTG------WWNLHRV 270 (662)
T ss_dssp TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEEEECTTS------SCEEEEE
T ss_pred CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEEEECCCC------CeEEEEE
Confidence 4555555543321100 22479999998 56 333332210 1111222222 677777665432 2478999
Q ss_pred ECCCCccccccEEcccCCCCC----ccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceE
Q 016368 220 DLKSDREDWKWEKKAQLKDGR----FSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAA 294 (390)
Q Consensus 220 d~~t~~~~~~W~~~~~~~~~~----~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 294 (390)
|+.++. ++.+....... +.......+.. ++++++.+.. +....+.+|..+++.+.+.. . ... ...+
T Consensus 271 ~~~~~~----~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~d~~~~~~~~l~~-~-~~~-~~~~ 341 (662)
T 3azo_A 271 DPATGA----ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GAAVLGILDPESGELVDAAG-P-WTE-WAAT 341 (662)
T ss_dssp CTTTCC----EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SSCEEEEEETTTTEEEECCS-S-CCE-EEEE
T ss_pred ECCCCc----eeecccccccccCccccccCceEeEeCCCEEEEEEEc--CccEEEEEECCCCcEEEecC-C-CCe-EEEE
Confidence 998888 88775532211 10001223333 6777776432 44556677988887777654 1 111 1122
Q ss_pred -EEeeCCeEEEEeCCCC---cEEEEECCCCceEEcc
Q 016368 295 -STMNEEELYVVNEGKG---RLSKYDADHDWWDEVI 326 (390)
Q Consensus 295 -~~~~~g~lyv~gg~~~---~v~~yd~~~~~W~~i~ 326 (390)
.. -++.+++..+... .++.+|..+.+.+.+.
T Consensus 342 ~s~-~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 342 LTV-SGTRAVGVAASPRTAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp EEE-ETTEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred Eec-CCCEEEEEEcCCCCCCEEEEEECCCCceEEee
Confidence 22 4566666554332 7899999888877764
No 226
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.90 E-value=2.9 Score=36.29 Aligned_cols=93 Identities=15% Similarity=0.085 Sum_probs=51.8
Q ss_pred ceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeC-CCCcEEEEECCCCceEEccccccccccee-EEEE-CC
Q 016368 266 KDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNE-GKGRLSKYDADHDWWDEVIELAELKGAEK-ITAA-RG 342 (390)
Q Consensus 266 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg-~~~~v~~yd~~~~~W~~i~~~p~~r~~~~-~~~~-~g 342 (390)
..+.++|..+..-..... ..... ........++.+++..| .++.+..||..+.+ .+..+..+..... ++.. +|
T Consensus 221 ~~i~lwd~~~~~~~~~~~-~~~~v-~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--~~~~l~gH~~~V~~l~~spdg 296 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVD-AHSQV-CSILWSPHYKELISGHGFAQNQLVIWKYPTMA--KVAELKGHTSRVLSLTMSPDG 296 (318)
T ss_dssp CEEEEEETTTCCEEEEEE-CSSCE-EEEEEETTTTEEEEEECTTTCCEEEEETTTCC--EEEEECCCSSCEEEEEECTTS
T ss_pred CEEEEEeccccccccccc-ceeee-eeeeecccccceEEEEEcCCCEEEEEECCCCc--EEEEEcCCCCCEEEEEEcCCC
Confidence 456678887765443322 11111 11122223445554444 56799999987643 4444444333333 3333 67
Q ss_pred EEEEEeeCCceEEEEEcCCC
Q 016368 343 RVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 343 ~l~i~g~~~~~v~~~d~~~~ 362 (390)
++++-|+.++.|.+||+.+.
T Consensus 297 ~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 297 ATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SCEEEEETTTEEEEECCSCC
T ss_pred CEEEEEecCCeEEEEECCCC
Confidence 77777777889999998764
No 227
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=93.90 E-value=2.7 Score=36.93 Aligned_cols=161 Identities=15% Similarity=0.163 Sum_probs=79.0
Q ss_pred CCcEEEeCCCC-ceecCCCCCCCCcceEEEE-ECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSN-TWFFGPQLSIPRRWCAMGS-VGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~-~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..++.||+... .|+.-.+ ... ..+.+. -++.||+.. ..+.+||..... .|+....... .
T Consensus 157 ~~l~~~d~~g~~~~~~~~~--~~~-~~~~~~d~~g~l~v~t-----------~~l~~~d~~g~~---~~~~~~~~~~--~ 217 (330)
T 3hxj_A 157 NYLYAINPDGTEKWRFKTN--DAI-TSAASIGKDGTIYFGS-----------DKVYAINPDGTE---KWNFYAGYWT--V 217 (330)
T ss_dssp SEEEEECTTSCEEEEEECS--SCC-CSCCEECTTCCEEEES-----------SSEEEECTTSCE---EEEECCSSCC--C
T ss_pred CEEEEECCCCCEeEEEecC--CCc-eeeeEEcCCCEEEEEe-----------CEEEEECCCCcE---EEEEccCCcc--e
Confidence 46888888722 3543211 111 122233 267777753 367888843222 2665432211 1
Q ss_pred cccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCC-CeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCC
Q 016368 242 SREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELD-KWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADH 319 (390)
Q Consensus 242 ~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~ 319 (390)
.+.+.. +|.+|+.. ......+||.... .|+.... .... ...+...+|.||+. ..++.+++||+..
T Consensus 218 ----~~~~~~~~g~l~v~t----~~~gl~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~g~l~v~-t~~ggl~~~d~~g 284 (330)
T 3hxj_A 218 ----TRPAISEDGTIYVTS----LDGHLYAINPDGTEKWRFKTG---KRIE-SSPVIGNTDTIYFG-SYDGHLYAINPDG 284 (330)
T ss_dssp ----SCCEECTTSCEEEEE----TTTEEEEECTTSCEEEEEECS---SCCC-SCCEECTTSCEEEE-CTTCEEEEECTTS
T ss_pred ----eceEECCCCeEEEEc----CCCeEEEECCCCCEeEEeeCC---CCcc-ccceEcCCCeEEEe-cCCCCEEEECCCC
Confidence 223333 55788763 2345667886544 3554322 1111 12333136777754 4466899999753
Q ss_pred C-ceEEcccccccccceeEEE-ECCEEEEEeeCCceEEEEEcC
Q 016368 320 D-WWDEVIELAELKGAEKITA-ARGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 320 ~-~W~~i~~~p~~r~~~~~~~-~~g~l~i~g~~~~~v~~~d~~ 360 (390)
. .|..- ++.. ...+++. .+|+||+- ..+..+.+....
T Consensus 285 ~~~~~~~--~~~~-~~~~~~~d~~g~l~~g-t~~G~~~~~~~~ 323 (330)
T 3hxj_A 285 TEKWNFE--TGSW-IIATPVIDENGTIYFG-TRNGKFYALFNL 323 (330)
T ss_dssp CEEEEEE--CSSC-CCSCCEECTTCCEEEE-CTTSCEEEEEC-
T ss_pred cEEEEEE--cCCc-cccceEEcCCCEEEEE-cCCCeEEEEecc
Confidence 3 35432 2211 2223444 57888885 444455554443
No 228
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.89 E-value=3.3 Score=36.97 Aligned_cols=146 Identities=10% Similarity=0.039 Sum_probs=83.2
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE--ECCEEEEEcccCCCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG--FKGNLCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd 272 (390)
+++||+.-- ....+.++++.+... ..+.....+..+ .+.++ .++.||+.- .....+++++
T Consensus 46 ~~~lyw~D~--------~~~~I~r~~~~g~~~-~~~~~~~~l~~p------~glavd~~~g~ly~~d---~~~~~I~~~~ 107 (318)
T 3sov_A 46 HGLIYWSDV--------SEEAIKRTEFNKTES-VQNVVVSGLLSP------DGLACDWLGEKLYWTD---SETNRIEVSN 107 (318)
T ss_dssp GTEEEEEET--------TTTEEEEEETTSSSC-CCEEEEECCSCC------CEEEEETTTTEEEEEE---TTTTEEEEEE
T ss_pred CCEEEEEEC--------CCCcEEEEEccCCCc-eEEEEcCCCCCc------cEEEEEcCCCeEEEEE---CCCCEEEEEE
Confidence 588998732 335788899876530 002212222221 33444 488999982 2345678899
Q ss_pred CCCCCeEecC-CCCCCCCCCceEEE-eeCCeEEEEeC-CCCcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEE
Q 016368 273 VELDKWKEMP-EGMHAGWNGPAAST-MNEEELYVVNE-GKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAV 347 (390)
Q Consensus 273 ~~~~~W~~~~-~~~~~~~~~~~~~~-~~~g~lyv~gg-~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~ 347 (390)
+....-+.+. .....+ ..+++ ..+|.||+... ..+.|+++++....=+.+.. .......++++- +++||+.
T Consensus 108 ~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-~~l~~Pnglavd~~~~~lY~a 183 (318)
T 3sov_A 108 LDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN-SEIYWPNGLTLDYEEQKLYWA 183 (318)
T ss_dssp TTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEE
T ss_pred CCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEE-CCCCCccEEEEeccCCEEEEE
Confidence 8765433332 112111 23343 13689999884 35699999988543333321 112233456664 7889998
Q ss_pred eeCCceEEEEEcCCC
Q 016368 348 CENGERIMVVDVLAS 362 (390)
Q Consensus 348 g~~~~~v~~~d~~~~ 362 (390)
=.....|+.+|....
T Consensus 184 D~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 184 DAKLNFIHKSNLDGT 198 (318)
T ss_dssp ETTTTEEEEEETTSC
T ss_pred ECCCCEEEEEcCCCC
Confidence 555668888887654
No 229
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=93.89 E-value=4.3 Score=38.27 Aligned_cols=198 Identities=8% Similarity=0.034 Sum_probs=95.4
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCC----ceecCCC---C----CCCCcceEEEE-ECCEEEEEeccCCCCCCCcc
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSN----TWFFGPQ---L----SIPRRWCAMGS-VGGVVYVASGVGAHYRGDVA 213 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~----~W~~~~~---~----~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~ 213 (390)
..+.+++.|. ..+.++++|..++ +-.+.-. + ...+ -|.... -++ |||..-.+.. +...
T Consensus 94 ~r~~l~v~~l------~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~-Ph~~~~~pdG-i~Vs~~g~~~--g~~~ 163 (462)
T 2ece_A 94 ERRFLIVPGL------RSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSR-LHTVHCGPDA-IYISALGNEE--GEGP 163 (462)
T ss_dssp CSCEEEEEBT------TTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEE-EEEEEECSSC-EEEEEEEETT--SCSC
T ss_pred cCCEEEEccC------CCCeEEEEECCCCCCCceeeeeechhhcccccCCCc-ccceeECCCe-EEEEcCCCcC--CCCC
Confidence 3455555553 3478999998776 2222110 1 1112 233333 356 7774322211 3455
Q ss_pred CeEEEEECCCCccccccEEcccCCCCCccccceEEE-EECCEEEEEccc--------C--------CCCceeEEEeCCCC
Q 016368 214 RSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAV-GFKGNLCMVNLK--------G--------NGAKDGAIYNVELD 276 (390)
Q Consensus 214 ~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~-~~~g~lyv~gg~--------g--------~~~~~~~~yd~~~~ 276 (390)
..+.++|.+|.+..-+|.. ...+.. + ++... .-++++++..-. | ..+..+.+||..+.
T Consensus 164 g~v~vlD~~T~~v~~~~~~-~~~~~~-~---~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 164 GGILMLDHYSFEPLGKWEI-DRGDQY-L---AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp CEEEEECTTTCCEEEECCS-BCTTCC-C---CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred CeEEEEECCCCeEEEEEcc-CCCCcc-c---cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 7899999998763222431 111111 1 12222 235555554310 0 12567789999875
Q ss_pred CeEecCCCCCCCCC--Cce-E-EE--eeCCeEEEEeC-----CCCcEEEEECCCCceEEcccc--cc-------------
Q 016368 277 KWKEMPEGMHAGWN--GPA-A-ST--MNEEELYVVNE-----GKGRLSKYDADHDWWDEVIEL--AE------------- 330 (390)
Q Consensus 277 ~W~~~~~~~~~~~~--~~~-~-~~--~~~g~lyv~gg-----~~~~v~~yd~~~~~W~~i~~~--p~------------- 330 (390)
+ .+.. .+.+.. .+. + .+ .-+..+||... -++.+++|..+...|..+..+ +.
T Consensus 239 k--~~~t-I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~ 315 (462)
T 2ece_A 239 K--RIHS-LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKP 315 (462)
T ss_dssp E--EEEE-EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGG
T ss_pred c--EeeE-EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccc
Confidence 3 2222 222211 111 1 10 11345666665 555666554444677655421 11
Q ss_pred ----cccceeEEEE-CC-EEEEEeeCCceEEEEEcCC
Q 016368 331 ----LKGAEKITAA-RG-RVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 331 ----~r~~~~~~~~-~g-~l~i~g~~~~~v~~~d~~~ 361 (390)
......+... +| .||+-..+.+.|.+||+..
T Consensus 316 f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 316 FKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp GTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred cccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 0112233333 44 5777656677999999864
No 230
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.88 E-value=0.94 Score=41.15 Aligned_cols=181 Identities=14% Similarity=-0.017 Sum_probs=92.7
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCE-EEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGV-VYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR 240 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~ 240 (390)
..++++|+.+++.+.+... .......... +++ |++... ... ......++++|..+.. ++.+.. ....
T Consensus 168 ~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~-~~~--~~~~~~l~~~d~~~~~----~~~l~~-~~~~ 237 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHE-GPH--DLVDARMWLVNEDGSN----VRKIKE-HAEG 237 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEEC-SCS--SSCSCCCEEEETTSCC----CEESSC-CCTT
T ss_pred ceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEec-CCC--CCCCceEEEEECCCCc----eeEeec-cCCC
Confidence 4688899988877655421 1212222222 344 544432 210 1123578999998887 777655 1111
Q ss_pred ccccceEEEE-ECCE-EEEEcccCCCCce--eEEEeCCCCCeEecCCCCCCCCCCceEEEee-CCeEEEEeC--------
Q 016368 241 FSREAVEAVG-FKGN-LCMVNLKGNGAKD--GAIYNVELDKWKEMPEGMHAGWNGPAASTMN-EEELYVVNE-------- 307 (390)
Q Consensus 241 ~~r~~~~~~~-~~g~-lyv~gg~g~~~~~--~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~g~lyv~gg-------- 307 (390)
.. ....+. -+|+ |++.+ ...+... +.++|+.+++...+.. .+. . ...... +|+++++.+
T Consensus 238 ~~--~~~~~~spdg~~l~~~~-~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~---~~~~s~~dg~~l~~~~~~~p~~~~ 309 (396)
T 3c5m_A 238 ES--CTHEFWIPDGSAMAYVS-YFKGQTDRVIYKANPETLENEEVMV-MPP-C---SHLMSNFDGSLMVGDGCDAPVDVA 309 (396)
T ss_dssp EE--EEEEEECTTSSCEEEEE-EETTTCCEEEEEECTTTCCEEEEEE-CCS-E---EEEEECSSSSEEEEEECCC-----
T ss_pred cc--ccceEECCCCCEEEEEe-cCCCCccceEEEEECCCCCeEEeee-CCC-C---CCCccCCCCceEEEecCCcceeec
Confidence 10 112222 2565 44442 1112233 7889998887766543 221 1 122225 888777643
Q ss_pred --------CCCcEEEEECCCCceEEcccccccc---------cceeEE-EECC-EEEEEeeC--CceEEEEEcCCC
Q 016368 308 --------GKGRLSKYDADHDWWDEVIELAELK---------GAEKIT-AARG-RVCAVCEN--GERIMVVDVLAS 362 (390)
Q Consensus 308 --------~~~~v~~yd~~~~~W~~i~~~p~~r---------~~~~~~-~~~g-~l~i~g~~--~~~v~~~d~~~~ 362 (390)
....++++|..+.....+...+..- ...... ..+| .|++.+.. ...++.+|+.+.
T Consensus 310 ~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 310 DADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp -----CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred cccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 2348999999887766554322100 011122 2244 45555432 236788887765
No 231
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.87 E-value=3.7 Score=37.33 Aligned_cols=181 Identities=7% Similarity=0.021 Sum_probs=94.9
Q ss_pred CCcEEEeCCCCceecCC--CCCCCC-cceEEEEE---CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC
Q 016368 164 ASPLAFNPQSNTWFFGP--QLSIPR-RWCAMGSV---GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK 237 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~--~~~~~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~ 237 (390)
..+.+||..+++-...- ..+... .......+ ++.+++.|+.+. .+.+||....... -..+..-
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~~~~~~~--~~~~~~h- 248 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDLRITSRA--VRTYHGH- 248 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEETTTTCCC--CEEECCC-
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEECCCCCcc--eEEECCc-
Confidence 46888998887543221 111111 11112222 567888887765 6888998643200 1222111
Q ss_pred CCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEec-CCC--CCCC-C-CCceEEEeeCCeEEEEeCCCCc
Q 016368 238 DGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEM-PEG--MHAG-W-NGPAASTMNEEELYVVNEGKGR 311 (390)
Q Consensus 238 ~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~-~~~--~~~~-~-~~~~~~~~~~g~lyv~gg~~~~ 311 (390)
... -.+++. -+++.++.|+ ....+.+||+.++.-... ... .... . ...+++...+|++++.|+.++.
T Consensus 249 ~~~----v~~v~~~p~~~~l~s~s---~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~ 321 (380)
T 3iz6_a 249 EGD----INSVKFFPDGQRFGTGS---DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD 321 (380)
T ss_dssp SSC----CCEEEECTTSSEEEEEC---SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC
T ss_pred CCC----eEEEEEecCCCeEEEEc---CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC
Confidence 111 122333 2566666641 234567899887643221 110 0011 1 1223333368999999999999
Q ss_pred EEEEECCCCceEE-cccccc-ccccee-EEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 312 LSKYDADHDWWDE-VIELAE-LKGAEK-ITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 312 v~~yd~~~~~W~~-i~~~p~-~r~~~~-~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+..||..+.+-.. +..+.. ...... +... +|..++.|+.+..+.+||+...
T Consensus 322 i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 322 CYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred EEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 9999987655332 222211 122222 3332 6777777777889999998754
No 232
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=93.78 E-value=3.4 Score=36.55 Aligned_cols=170 Identities=8% Similarity=-0.011 Sum_probs=81.3
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
..+.+||..+++-... +...........+ ++.+++.|+.+. .+.+||..... -..+..-...
T Consensus 87 ~~v~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D~--------~i~vwd~~~~~----~~~~~~h~~~-- 150 (319)
T 3frx_A 87 KTLRLWDVATGETYQR--FVGHKSDVMSVDIDKKASMIISGSRDK--------TIKVWTIKGQC----LATLLGHNDW-- 150 (319)
T ss_dssp SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSCEEEEEETTS--------CEEEEETTSCE----EEEECCCSSC--
T ss_pred CEEEEEECCCCCeeEE--EccCCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCe----EEEEeccCCc--
Confidence 4688899988753211 1111111112222 566777776654 67788886554 3222211110
Q ss_pred cccceEEEEE-------CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEE
Q 016368 242 SREAVEAVGF-------KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSK 314 (390)
Q Consensus 242 ~r~~~~~~~~-------~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~ 314 (390)
...+... ++..++.|+ ....+.+||+.+.+-...-. .......+++...+|++++.|+.++.+..
T Consensus 151 ---v~~~~~~~~~~~~~~~~~l~s~~---~d~~i~~wd~~~~~~~~~~~--~h~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 151 ---VSQVRVVPNEKADDDSVTIISAG---NDKMVKAWNLNQFQIEADFI--GHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp ---EEEEEECCC------CCEEEEEE---TTSCEEEEETTTTEEEEEEC--CCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred ---EEEEEEccCCCCCCCccEEEEEe---CCCEEEEEECCcchhheeec--CCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 0112211 222344421 23456788887654322111 11111122332357889999999999999
Q ss_pred EECCCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcC
Q 016368 315 YDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 315 yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~ 360 (390)
||..+.+= +..+........++.. ++.+++.+. ...+.+|++.
T Consensus 223 wd~~~~~~--~~~~~~~~~v~~~~~sp~~~~la~~~-~~~i~v~~~~ 266 (319)
T 3frx_A 223 WNLAAKKA--MYTLSAQDEVFSLAFSPNRYWLAAAT-ATGIKVFSLD 266 (319)
T ss_dssp EETTTTEE--EEEEECCSCEEEEEECSSSSEEEEEE-TTEEEEEEET
T ss_pred EECCCCcE--EEEecCCCcEEEEEEcCCCCEEEEEc-CCCcEEEEeC
Confidence 99987542 2222222222233333 455544433 3446666554
No 233
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.63 E-value=6.2 Score=39.14 Aligned_cols=142 Identities=8% Similarity=0.032 Sum_probs=71.2
Q ss_pred cCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCE-EEEEccc-CCCCceeEEEeCCCC-CeEecCCCCCCC
Q 016368 213 ARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGN-LCMVNLK-GNGAKDGAIYNVELD-KWKEMPEGMHAG 288 (390)
Q Consensus 213 ~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~-lyv~gg~-g~~~~~~~~yd~~~~-~W~~~~~~~~~~ 288 (390)
...+++||..++. -..+........ ....++. -+|+ +++.... +.....+.++|+.+. ....+.......
T Consensus 234 ~~~l~~~d~~~~~----~~~~~~~~~~~~--~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~ 307 (706)
T 2z3z_A 234 HVTVGIYHLATGK----TVYLQTGEPKEK--FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKH 307 (706)
T ss_dssp EEEEEEEETTTTE----EEECCCCSCTTC--EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSS
T ss_pred eeEEEEEECCCCc----eEeeccCCCCce--eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCC
Confidence 3578999998877 554442211111 0112222 3665 4443211 111235678999887 665543211111
Q ss_pred CC--CceEEEee--CCeEEEEeCCCC--cEEEEECCCCceEEcccccccccceeEEEE---CCEEEEEeeCC----ceEE
Q 016368 289 WN--GPAASTMN--EEELYVVNEGKG--RLSKYDADHDWWDEVIELAELKGAEKITAA---RGRVCAVCENG----ERIM 355 (390)
Q Consensus 289 ~~--~~~~~~~~--~g~lyv~gg~~~--~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~---~g~l~i~g~~~----~~v~ 355 (390)
.. ...+.... +|++++.+..++ .+|.+|........+..-. .....+..+ +..|++.+..+ ..++
T Consensus 308 ~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~--~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~ 385 (706)
T 2z3z_A 308 YVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE--WEVTNFAGFDPKGTRLYFESTEASPLERHFY 385 (706)
T ss_dssp CCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS--SCEEEEEEECTTSSEEEEEESSSCTTCBEEE
T ss_pred eECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC--eEEEeeeEEcCCCCEEEEEecCCCCceEEEE
Confidence 11 11223225 888776665554 7888887666666654211 111222222 34576665443 3788
Q ss_pred EEEcCCC
Q 016368 356 VVDVLAS 362 (390)
Q Consensus 356 ~~d~~~~ 362 (390)
.+|+.+.
T Consensus 386 ~~d~~~~ 392 (706)
T 2z3z_A 386 CIDIKGG 392 (706)
T ss_dssp EEETTCC
T ss_pred EEEcCCC
Confidence 8887664
No 234
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=93.44 E-value=2.5 Score=41.02 Aligned_cols=189 Identities=10% Similarity=-0.007 Sum_probs=98.5
Q ss_pred EeecC-eEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEEC
Q 016368 143 LGVRN-NLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDL 221 (390)
Q Consensus 143 ~~~~~-~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~ 221 (390)
...++ +++++.+.. +.+.+||..+++-+.+...+. ......-+|+..++++.+.. ....++++|.
T Consensus 117 ~s~dg~~~~~~s~~~-------~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~----~~~~i~~~d~ 182 (582)
T 3o4h_A 117 GVDTGEAVVFTGATE-------DRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGG----GRVSLFTSNL 182 (582)
T ss_dssp EEECSSCEEEEEECS-------SCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEET----TEEEEEEEET
T ss_pred eCCCCCeEEEEecCC-------CCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCC----CCeEEEEEcC
Confidence 33344 466665432 334588988887666543332 12222235665555544321 2246999999
Q ss_pred CCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCce------EE
Q 016368 222 KSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPA------AS 295 (390)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~------~~ 295 (390)
.++. ++.+..-.... ...+..-+|+..+.+ ...+...+.++|+++++...+.. ......... .+
T Consensus 183 ~~g~----~~~l~~~~~~~----~~~~~SpDG~~l~~~-~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 183 SSGG----LRVFDSGEGSF----SSASISPGMKVTAGL-ETAREARLVTVDPRDGSVEDLEL-PSKDFSSYRPTAITWLG 252 (582)
T ss_dssp TTCC----CEEECCSSCEE----EEEEECTTSCEEEEE-ECSSCEEEEEECTTTCCEEECCC-SCSHHHHHCCSEEEEEE
T ss_pred CCCC----ceEeecCCCcc----ccceECCCCCEEEEc-cCCCeeEEEEEcCCCCcEEEccC-CCcChhhhhhcccccee
Confidence 9998 87664332211 111222366654442 12222467789999888773322 111101111 00
Q ss_pred EeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCC---ceEEEEEcCC
Q 016368 296 TMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENG---ERIMVVDVLA 361 (390)
Q Consensus 296 ~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~---~~v~~~d~~~ 361 (390)
...+|++++.+..++.+..|+. .+... .+. .....+...+|++++.+... ..++++|..+
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~-~~v~~~~~sdg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFID--GERVE---APQ-GNHGRVVLWRGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEET--TEEEC---CCS-SEEEEEEEETTEEEEEEEETTEEEEEEEETTCC
T ss_pred EcCCCcEEEEEEcCCcEEEEEE--CCeec---cCC-CceEEEEecCCEEEEEEcCCCCCCeEEEEcCCC
Confidence 2267888888887888888887 33332 111 11123333378877665432 3577777653
No 235
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=93.32 E-value=4.9 Score=39.34 Aligned_cols=175 Identities=10% Similarity=0.038 Sum_probs=93.1
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEE-ccc--C--
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEK-KAQ--L-- 236 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~-~~~--~-- 236 (390)
..+.+||..+.+... .+......-..+.+ ++++++.|+.+. .+.+||..++. -.. +.. +
T Consensus 170 ~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D~--------~i~lwd~~~g~----~~~~~~~~~~~~ 235 (611)
T 1nr0_A 170 NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGDG--------TIVLYNGVDGT----KTGVFEDDSLKN 235 (611)
T ss_dssp SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCC----EEEECBCTTSSS
T ss_pred CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECCC--------cEEEEECCCCc----Eeeeeccccccc
Confidence 357778866544322 12111111122222 677777777664 68889988776 322 211 0
Q ss_pred -CCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCC-CceEEEeeCCeEEEEeCCCCcEE
Q 016368 237 -KDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWN-GPAASTMNEEELYVVNEGKGRLS 313 (390)
Q Consensus 237 -~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~g~lyv~gg~~~~v~ 313 (390)
..... -.+++.. +|+..+.|+ ....+.++|..+.+....-. ...... ....+. .++..++.++.++.+.
T Consensus 236 ~~h~~~---V~~v~~spdg~~l~s~s---~D~~v~lWd~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~l~s~s~d~~i~ 307 (611)
T 1nr0_A 236 VAHSGS---VFGLTWSPDGTKIASAS---ADKTIKIWNVATLKVEKTIP-VGTRIEDQQLGII-WTKQALVSISANGFIN 307 (611)
T ss_dssp CSSSSC---EEEEEECTTSSEEEEEE---TTSEEEEEETTTTEEEEEEE-CCSSGGGCEEEEE-ECSSCEEEEETTCCEE
T ss_pred cccCCC---EEEEEECCCCCEEEEEe---CCCeEEEEeCCCCceeeeec-CCCCccceeEEEE-EcCCEEEEEeCCCcEE
Confidence 11111 1233332 566665532 23457789998776543211 111111 112222 5777788888888999
Q ss_pred EEECCCCceEEccccccccccee-EEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 314 KYDADHDWWDEVIELAELKGAEK-ITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 314 ~yd~~~~~W~~i~~~p~~r~~~~-~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.||+.+..-.. .+........ ++.. +|+..+.++.+..|.+||+.+.
T Consensus 308 ~~~~~~~~~~~--~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 308 FVNPELGSIDQ--VRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp EEETTTTEEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEeCCCCCcce--EEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 99988764222 2222222222 3332 6777777777889999998764
No 236
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.21 E-value=6.9 Score=38.42 Aligned_cols=106 Identities=8% Similarity=0.099 Sum_probs=57.5
Q ss_pred CCcEEEeC-CCC--ceecCCCCCC-----CC---cceEEEE--ECCE----EEEEeccCCCCCCCccCeEEEEECCCCcc
Q 016368 164 ASPLAFNP-QSN--TWFFGPQLSI-----PR---RWCAMGS--VGGV----VYVASGVGAHYRGDVARSMKKWDLKSDRE 226 (390)
Q Consensus 164 ~~~~~~dp-~t~--~W~~~~~~~~-----~r---~~~~~~~--~~~~----lyv~GG~~~~~~~~~~~~~~~yd~~t~~~ 226 (390)
+.++.+|. .++ .|+.-..... .. ...+.++ .+++ ||+... ...+..+|.+|++.
T Consensus 73 ~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~---------dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 73 NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL---------DGNVAALNAETGET 143 (599)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---------TSEEEEEETTTCCE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---------CCEEEEEECCCCCE
Confidence 56889999 777 5876443321 11 1123344 5666 887532 13688999988773
Q ss_pred ccccEEcccCCCCCccccceEEEEECCEEEEEcccCC--CCceeEEEeCCCC--CeEec
Q 016368 227 DWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGN--GAKDGAIYNVELD--KWKEM 281 (390)
Q Consensus 227 ~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~--~~~~~~~yd~~~~--~W~~~ 281 (390)
.|+.-..-...... ...+.++.++++|+-+..+. ....+..||.+++ .|+.-
T Consensus 144 --~W~~~~~~~~~~~~-~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 144 --VWKVENSDIKVGST-LTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp --EEEEECCCGGGTCB-CCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred --EEeecCCCCCccce-eecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 38753221100000 01233457898887531111 1235678999876 48754
No 237
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=93.18 E-value=6.8 Score=38.27 Aligned_cols=189 Identities=11% Similarity=0.071 Sum_probs=95.2
Q ss_pred cCeEEEEEeecCCCCCCCCCcEEEeCCCCceec-CCC--C---CCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEE
Q 016368 146 RNNLVLIAATTPHFLPALASPLAFNPQSNTWFF-GPQ--L---SIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKK 218 (390)
Q Consensus 146 ~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~-~~~--~---~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 218 (390)
++.+++.++.. ..+.+||..+++-.. +.. + .....-.+++.. +++.++.|+.+. .+.+
T Consensus 201 dg~~las~s~D-------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~--------~v~l 265 (611)
T 1nr0_A 201 DGSLFASTGGD-------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK--------TIKI 265 (611)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS--------EEEE
T ss_pred CCCEEEEEECC-------CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC--------eEEE
Confidence 34555555432 468889988775432 211 0 111111122222 567777777654 7889
Q ss_pred EECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEee
Q 016368 219 WDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMN 298 (390)
Q Consensus 219 yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 298 (390)
||..+.. ....-....... .....+..++...+.+. .......+|+.+.+-...-. .....-.+++...
T Consensus 266 Wd~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~l~s~s---~d~~i~~~~~~~~~~~~~~~--gh~~~v~~l~~sp 334 (611)
T 1nr0_A 266 WNVATLK----VEKTIPVGTRIE--DQQLGIIWTKQALVSIS---ANGFINFVNPELGSIDQVRY--GHNKAITALSSSA 334 (611)
T ss_dssp EETTTTE----EEEEEECCSSGG--GCEEEEEECSSCEEEEE---TTCCEEEEETTTTEEEEEEC--CCSSCEEEEEECT
T ss_pred EeCCCCc----eeeeecCCCCcc--ceeEEEEEcCCEEEEEe---CCCcEEEEeCCCCCcceEEc--CCCCCEEEEEEeC
Confidence 9998876 443222211111 01223334555444431 23346678877654222111 1111112233235
Q ss_pred CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 299 EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
+|+.++.++.++.+..||..+..-.............++... ++.++. ++.+..+.++|+.+
T Consensus 335 dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s-~s~d~~v~~w~~~~ 397 (611)
T 1nr0_A 335 DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT-VSWDDHLKVVPAGG 397 (611)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEE-EETTTEEEEECSSS
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEE-EEcCCceEEeecCC
Confidence 788888999999999999988765543211111112223333 444443 35566778887654
No 238
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=93.11 E-value=6.4 Score=37.73 Aligned_cols=169 Identities=6% Similarity=0.023 Sum_probs=86.7
Q ss_pred CcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccc
Q 016368 165 SPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSR 243 (390)
Q Consensus 165 ~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r 243 (390)
.+.+||.....-..+..... .-.+++.. +++.++.|+.+. .+.+||..... -..+..-...
T Consensus 326 ~i~~w~~~~~~~~~~~~~~~--~v~~~~~s~~g~~l~~~~~dg--------~v~~~~~~~~~----~~~~~~~~~~---- 387 (577)
T 2ymu_A 326 TVKLWNRNGQHLQTLTGHSS--SVWGVAFSPDGQTIASASDDK--------TVKLWNRNGQL----LQTLTGHSSS---- 387 (577)
T ss_dssp CEEEEETTSCEEEEECCCSS--CEEEEEECTTSSEEEEEETTS--------EEEEEETTCCE----EEEEECCSSC----
T ss_pred eEEEEeCCCCeeEEEeCCCC--CEEEEEECCCCCEEEEEeCCC--------EEEEEcCCCCE----EEEecCCCCC----
Confidence 56778876654443322111 11122222 566666666543 57788865443 3333221111
Q ss_pred cceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCce
Q 016368 244 EAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWW 322 (390)
Q Consensus 244 ~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W 322 (390)
..+++. -+++..+.|+ ....+.+||.....-..+.. ......+++...++++++.++.++.+..||.....-
T Consensus 388 -v~~~~~s~dg~~l~~~~---~d~~v~~~~~~~~~~~~~~~---~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~ 460 (577)
T 2ymu_A 388 -VRGVAFSPDGQTIASAS---DDKTVKLWNRNGQLLQTLTG---HSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLL 460 (577)
T ss_dssp -EEEEEECTTSSCEEEEE---TTSEEEEECTTCCEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEE
T ss_pred -eEEEEECCCCCEEEEEe---CCCEEEEEeCCCCEEEEecC---CCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEE
Confidence 122222 2566555531 22346678865433332222 111112233235788888888899999999765433
Q ss_pred EEcccccccccce-eEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 323 DEVIELAELKGAE-KITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 323 ~~i~~~p~~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
..+ ....... +++.. ++++++.++.+..|.+||...
T Consensus 461 ~~~---~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~ 498 (577)
T 2ymu_A 461 QTL---TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 498 (577)
T ss_dssp EEE---ECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred EEE---cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC
Confidence 322 2222222 23333 677777777778899999644
No 239
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.08 E-value=2.2 Score=41.66 Aligned_cols=116 Identities=11% Similarity=0.163 Sum_probs=71.0
Q ss_pred EEEECCEEEEEcccCCC-CceeEEEeC-CCC--CeEecCCCCCC----C---CCCceEEEeeCCeEEEEeCCCCcEEEEE
Q 016368 248 AVGFKGNLCMVNLKGNG-AKDGAIYNV-ELD--KWKEMPEGMHA----G---WNGPAASTMNEEELYVVNEGKGRLSKYD 316 (390)
Q Consensus 248 ~~~~~g~lyv~gg~g~~-~~~~~~yd~-~~~--~W~~~~~~~~~----~---~~~~~~~~~~~g~lyv~gg~~~~v~~yd 316 (390)
.++.++++|+.+ . ...+.++|. +++ .|+.-...... . ....+.++ .+++||+.. .++.++.+|
T Consensus 58 P~v~~g~vyv~~----~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~-~dg~l~alD 131 (571)
T 2ad6_A 58 PLVIGDMMYVHS----AFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY-GAGQIVKKQ-ANGHLLALD 131 (571)
T ss_dssp CEEETTEEEEEC----STTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEEC-TTSEEEEEE
T ss_pred cEEECCEEEEEe----CCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE-ECCEEEEEe-CCCEEEEEE
Confidence 345799999984 2 345889998 665 69875431110 0 11123444 688887764 467899999
Q ss_pred CCCCc--eEEccccccc--ccceeEEEECCEEEEEeeC-----CceEEEEEcCCCCCcceEec
Q 016368 317 ADHDW--WDEVIELAEL--KGAEKITAARGRVCAVCEN-----GERIMVVDVLASPARAWLVD 370 (390)
Q Consensus 317 ~~~~~--W~~i~~~p~~--r~~~~~~~~~g~l~i~g~~-----~~~v~~~d~~~~~~~~W~~~ 370 (390)
.++.+ |+.-..-+.. ....+.++.+|+||+-... ...++.+|..+.. ..|+..
T Consensus 132 ~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~-~~W~~~ 193 (571)
T 2ad6_A 132 AKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGE-LKWRAF 193 (571)
T ss_dssp TTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCC-EEEEEE
T ss_pred CCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCc-EEEEEc
Confidence 98764 8753211111 1122334568888876543 4589999998763 368854
No 240
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.93 E-value=4.9 Score=35.90 Aligned_cols=188 Identities=13% Similarity=0.172 Sum_probs=94.5
Q ss_pred cEEEeCCCCceecCCCC-CCCC-cceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCC-CCcc
Q 016368 166 PLAFNPQSNTWFFGPQL-SIPR-RWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKD-GRFS 242 (390)
Q Consensus 166 ~~~~dp~t~~W~~~~~~-~~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~-~~~~ 242 (390)
++.-.-.-.+|+.+... ..+. ...++...++.+|++|... .++.-+=.-.+ |+.+..... +..
T Consensus 58 i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g---------~i~~S~DgG~t----W~~~~~~~~~~~~- 123 (327)
T 2xbg_A 58 LMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPP---------IMLHTTDGGQS----WSQIPLDPKLPGS- 123 (327)
T ss_dssp EEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETT---------EEEEESSTTSS----CEECCCCTTCSSC-
T ss_pred EEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCC---------eEEEECCCCCC----ceECccccCCCCC-
Confidence 44433344589987532 2222 2334455577888875221 22221112345 999875321 111
Q ss_pred ccceEEE-EECCEEEEEcccCCCCceeEEEeCC--CCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECC-
Q 016368 243 REAVEAV-GFKGNLCMVNLKGNGAKDGAIYNVE--LDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDAD- 318 (390)
Q Consensus 243 r~~~~~~-~~~g~lyv~gg~g~~~~~~~~yd~~--~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~- 318 (390)
...++ .-++.+|+.+.. ..+|-.. -.+|+.+.... .. ....++...++.+++++ ..+.+++-+-.
T Consensus 124 --~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~-~~-~~~~~~~~~~~~~~~~g-~~G~~~~S~d~g 192 (327)
T 2xbg_A 124 --PRLIKALGNGSAEMITNV------GAIYRTKDSGKNWQALVQEA-IG-VMRNLNRSPSGEYVAVS-SRGSFYSTWEPG 192 (327)
T ss_dssp --EEEEEEEETTEEEEEETT------CCEEEESSTTSSEEEEECSC-CC-CEEEEEECTTSCEEEEE-TTSSEEEEECTT
T ss_pred --eEEEEEECCCCEEEEeCC------ccEEEEcCCCCCCEEeecCC-Cc-ceEEEEEcCCCcEEEEE-CCCcEEEEeCCC
Confidence 13333 357888888522 1243332 45899886522 21 22233332467777666 35566665433
Q ss_pred CCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCCCCcceE-ecCC---CCeeEEEEEe
Q 016368 319 HDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLASPARAWL-VDPP---RGFQVVAVHV 382 (390)
Q Consensus 319 ~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~~~~~W~-~~~p---~g~~~~~~~~ 382 (390)
...|+.+.. +.....+.++.. ++.+|+++..+ .++..+.. .++.|+ +..| .+..+.++..
T Consensus 193 G~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~G-~~~~s~~D--~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 193 QTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNGG-KIAFSDPD--NSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp CSSCEEEEC-CSSSCEEEEEECTTSCEEEEETTT-EEEEEETT--EEEEECCCBCTTSSCCSCEEEEEE
T ss_pred CCceeECCC-CCCCccceeEECCCCCEEEEeCCc-eEEEecCC--CCCeeEeccCCcccCCcceEEEEe
Confidence 678999853 333333444443 67888885443 45554311 234687 3333 3334444443
No 241
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=92.93 E-value=1.6 Score=41.05 Aligned_cols=142 Identities=11% Similarity=0.136 Sum_probs=79.1
Q ss_pred CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCC-CceeEEEeC
Q 016368 196 GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNG-AKDGAIYNV 273 (390)
Q Consensus 196 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~-~~~~~~yd~ 273 (390)
+.||+.-. . ..+.++|+.++. .+.+..... . ...+++ .+|.||+....+.. ......++.
T Consensus 153 g~Lyv~D~--------~-~~I~~id~~~g~----v~~~~~~~~-~----P~giavd~dG~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 153 DDLYWVGQ--------R-DAFRHVDFVNQY----VDIKTTNIG-Q----CADVNFTLNGDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CEEEEECB--------T-SCEEEEETTTTE----EEEECCCCS-C----EEEEEECTTCCEEEEECCSCTTSEEEEEECG
T ss_pred CEEEEEeC--------C-CCEEEEECCCCE----EEEeecCCC-C----ccEEEECCCCCEEEEcCCCCcccceEEEEEC
Confidence 78998721 1 689999998887 665543111 1 133333 46679988421111 122334544
Q ss_pred CCCCeE---ecCCCCCCCCCCceEEEee-CCeEEEEeCCCCcEEEEECCCCce-EEcccccccccceeEEEE-CC-EEEE
Q 016368 274 ELDKWK---EMPEGMHAGWNGPAASTMN-EEELYVVNEGKGRLSKYDADHDWW-DEVIELAELKGAEKITAA-RG-RVCA 346 (390)
Q Consensus 274 ~~~~W~---~~~~~~~~~~~~~~~~~~~-~g~lyv~gg~~~~v~~yd~~~~~W-~~i~~~p~~r~~~~~~~~-~g-~l~i 346 (390)
. ..|. .++. . .....+++.. +|.||+.....+.+++||+.+..- ..+...........++.. +| .||+
T Consensus 215 ~-~~~~~~~~~~~-~---~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 215 A-SGFTERLSLCN-A---RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp G-GTTCCEEEEEE-C---SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEE
T ss_pred C-CCeeccccccc-c---CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEE
Confidence 3 2232 1111 1 1112333313 799999987778999999986655 333222222223345554 44 5999
Q ss_pred EeeCCceEEEEEcC
Q 016368 347 VCENGERIMVVDVL 360 (390)
Q Consensus 347 ~g~~~~~v~~~d~~ 360 (390)
.-...+.|+.+|..
T Consensus 290 ad~~~~~I~~~~~d 303 (433)
T 4hw6_A 290 IYNGKHCIYRVDYN 303 (433)
T ss_dssp EETTTTEEEEEEBC
T ss_pred EeCCCCEEEEEeCC
Confidence 86667789998865
No 242
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.82 E-value=8.4 Score=38.34 Aligned_cols=239 Identities=10% Similarity=0.045 Sum_probs=115.5
Q ss_pred ceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee-cCeEEEEEeecCCCCCCCCCcEEEeCCCCcee
Q 016368 99 SMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV-RNNLVLIAATTPHFLPALASPLAFNPQSNTWF 177 (390)
Q Consensus 99 ~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~ 177 (390)
...++..+...+.|+.+.........+ .. .. . ....+ +++.+.+.....+ .....++++|..+++..
T Consensus 93 ~~~l~~~~~~~~~~~~l~d~~~~a~~~-~~---~~-----~-~~~~SPDG~~la~~~~~~G--~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 93 KAILYWRQGESGQEKVLLDPNGWSKDG-TV---SL-----G-TWAVSWDGKKVAFAQKPNA--ADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp SCEEEEEESTTSCCEEEECGGGSSSSS-CE---EE-----E-EEEECTTSSEEEEEEEETT--CSCCEEEEEETTTCCBC
T ss_pred EEEEEEEcCCCCCcEEEEchHHhccCC-CE---EE-----E-EEEECCCCCEEEEEECCCC--CceEEEEEEECCCCCCc
Confidence 345677787777777765433201100 00 00 0 22223 4444444433222 22357999999999875
Q ss_pred cCCCCCCCCcceEEEEE-CCEEEEEeccCCCC-----CCCccCeEEEEECCCCccccccE--EcccCCCC-CccccceEE
Q 016368 178 FGPQLSIPRRWCAMGSV-GGVVYVASGVGAHY-----RGDVARSMKKWDLKSDREDWKWE--KKAQLKDG-RFSREAVEA 248 (390)
Q Consensus 178 ~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~-----~~~~~~~~~~yd~~t~~~~~~W~--~~~~~~~~-~~~r~~~~~ 248 (390)
....+..... ...+.. +|+.++++..+... .......+++++..+.. -+ .+...+.. .. ..+.
T Consensus 161 ~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~----~~~~lv~~~~~~~~~---~~~~ 232 (695)
T 2bkl_A 161 KVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP----SKDTVVHERTGDPTT---FLQS 232 (695)
T ss_dssp SSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG----GGCEEEECCCCCTTC---EEEE
T ss_pred CCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc----hhceEEEecCCCCEE---EEEE
Confidence 2111211111 222332 56655555543210 00234568999998876 32 22222211 11 1222
Q ss_pred E-EECCEEEEEccc-CCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCC---CCcEEEEECCCCc--
Q 016368 249 V-GFKGNLCMVNLK-GNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEG---KGRLSKYDADHDW-- 321 (390)
Q Consensus 249 ~-~~~g~lyv~gg~-g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~---~~~v~~yd~~~~~-- 321 (390)
. .-+|+..+++.. +.+...+.++|..+..|+.+.... . .....+. .+|.+|+.... ++.++++|.++..
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~-~--~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~ 308 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV-G--AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA 308 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS-S--CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC-C--ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 2 235654444221 112234556677677787775412 1 1122233 46666666542 3589999987654
Q ss_pred -eEEcccccccccceeEEEECCEEEEEeeCC--ceEEEEEcCC
Q 016368 322 -WDEVIELAELKGAEKITAARGRVCAVCENG--ERIMVVDVLA 361 (390)
Q Consensus 322 -W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~--~~v~~~d~~~ 361 (390)
|+.+...........+...++.+++....+ ..++++|+..
T Consensus 309 ~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 309 SWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp GCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTC
T ss_pred CCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCC
Confidence 877653221111223444588888776433 3677777643
No 243
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=92.74 E-value=6.1 Score=36.55 Aligned_cols=64 Identities=9% Similarity=0.080 Sum_probs=42.0
Q ss_pred CCeEEEEeCCCCcEEEEECCCCc-eEEccccccccccee-EEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 299 EEELYVVNEGKGRLSKYDADHDW-WDEVIELAELKGAEK-ITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~-W~~i~~~p~~r~~~~-~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.+++.++.++.+..||..+.. ...+..+........ +... +..+++.|+.++.|.+||+...
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 67888899889999999998652 222222222222222 3332 3348888888889999999863
No 244
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.71 E-value=8.7 Score=38.24 Aligned_cols=183 Identities=8% Similarity=-0.056 Sum_probs=92.5
Q ss_pred CCcEEEeCCCCcee--cCCCCCCC-CcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC
Q 016368 164 ASPLAFNPQSNTWF--FGPQLSIP-RRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG 239 (390)
Q Consensus 164 ~~~~~~dp~t~~W~--~~~~~~~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~ 239 (390)
..+++++..+.+-. .+-..+.. ....+.... +|+..+++.... .....++++|..+.. |+.+..-...
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~----~~~~~l~~~~~~~~~----~~~l~~~~~~ 273 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG----WSENDVYWKRPGEKD----FRLLVKGVGA 273 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET----TTEEEEEEECTTCSS----CEEEEECSSC
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC----CCceEEEEEcCCCCc----eEEeecCCCc
Confidence 45888998877532 22111111 122222222 555444433321 134577777777777 8877653322
Q ss_pred CccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCC---eEecCCCCCCCCCCceEEEeeCCeEEEEeCCCC--cEEE
Q 016368 240 RFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDK---WKEMPEGMHAGWNGPAASTMNEEELYVVNEGKG--RLSK 314 (390)
Q Consensus 240 ~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~--~v~~ 314 (390)
. ...+..+|.+|+.+..+.....+.++|+.+.. |+.+...-+ ...-..+.. .+++|++....++ .++.
T Consensus 274 ~-----~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~l~~~~~-~~~~lv~~~~~dg~~~l~~ 346 (695)
T 2bkl_A 274 K-----YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS-SASLLSVSI-VGGHLSLEYLKDATSEVRV 346 (695)
T ss_dssp C-----EEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS-SCEEEEEEE-ETTEEEEEEEETTEEEEEE
T ss_pred e-----EEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC-CCeEEEEEE-ECCEEEEEEEECCEEEEEE
Confidence 1 23333577766664222234567788987654 887654111 111223344 5888888876655 7888
Q ss_pred EECCCCceEEcccccccccceeEEEE-CC-EEEEEeeC---CceEEEEEcCCC
Q 016368 315 YDADHDWWDEVIELAELKGAEKITAA-RG-RVCAVCEN---GERIMVVDVLAS 362 (390)
Q Consensus 315 yd~~~~~W~~i~~~p~~r~~~~~~~~-~g-~l~i~g~~---~~~v~~~d~~~~ 362 (390)
+|.....-..+. ++.......+... ++ .+++.... ...++.+|+.+.
T Consensus 347 ~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 347 ATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp EETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred EeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 887644333332 2211111111111 33 45444322 236888888765
No 245
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=92.64 E-value=1.4 Score=39.66 Aligned_cols=59 Identities=10% Similarity=0.163 Sum_probs=39.8
Q ss_pred eEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeCC
Q 016368 293 AASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENG 351 (390)
Q Consensus 293 ~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~ 351 (390)
++++.-+|.||+.....+.|.+||+++.+...+...+......+++.- +|+|||.....
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 444435789999988778999999955666666554433344455553 68899886443
No 246
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=92.47 E-value=4.2 Score=36.85 Aligned_cols=136 Identities=8% Similarity=0.061 Sum_probs=74.6
Q ss_pred CeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCc
Q 016368 214 RSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGP 292 (390)
Q Consensus 214 ~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~ 292 (390)
..+.++|+++.. -......... -.+++. -+|++.+.+ ......+++..++.-..............
T Consensus 157 ~~i~iwd~~~~~----~~~~~~~~~~-----V~~v~fspdg~~l~s~----s~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 157 AIMRIIDPSDLT----EKFEIETRGE-----VKDLHFSTDGKVVAYI----TGSSLEVISTVTGSCIARKTDFDKNWSLS 223 (365)
T ss_dssp CEEEEEETTTTE----EEEEEECSSC-----CCEEEECTTSSEEEEE----CSSCEEEEETTTCCEEEEECCCCTTEEEE
T ss_pred CEEEEeECCCCc----EEEEeCCCCc-----eEEEEEccCCceEEec----cceeEEEEEeccCcceeeeecCCCCCCEE
Confidence 378899998876 3322221111 133333 367777664 33456677777765443222111111111
Q ss_pred eEEEeeCCeEEEEeCCCC----cEEEEECCCCceEEcc--ccccccccee-EEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 293 AASTMNEEELYVVNEGKG----RLSKYDADHDWWDEVI--ELAELKGAEK-ITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 293 ~~~~~~~g~lyv~gg~~~----~v~~yd~~~~~W~~i~--~~p~~r~~~~-~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.++...+|..++.++.++ .++.+|.......... .+........ ++.. +|++++.|+.+..|.+||+.+.
T Consensus 224 ~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 222236888888776544 5777777665554332 2222222222 3332 7888888888889999998764
No 247
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.36 E-value=5.2 Score=34.85 Aligned_cols=186 Identities=15% Similarity=0.091 Sum_probs=95.7
Q ss_pred CCcEEEeCCCC--ceecCCCCCCCCcce-EEEEE---CCEEEEEeccCCCCCCCccCeEEEEECCCCcc---ccccEEcc
Q 016368 164 ASPLAFNPQSN--TWFFGPQLSIPRRWC-AMGSV---GGVVYVASGVGAHYRGDVARSMKKWDLKSDRE---DWKWEKKA 234 (390)
Q Consensus 164 ~~~~~~dp~t~--~W~~~~~~~~~r~~~-~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~---~~~W~~~~ 234 (390)
..+.+||..++ .++.+..+....... +++.. ++.+++.|+.+. .+.+||..+... ...|+.+.
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg--------~v~vwd~~~~~~~~~~~~~~~~~ 104 (351)
T 3f3f_A 33 QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK--------TVKLWEEDPDQEECSGRRWNKLC 104 (351)
T ss_dssp SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS--------CEEEEEECTTSCTTSSCSEEEEE
T ss_pred CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC--------eEEEEecCCCcccccccCcceee
Confidence 36778887654 333332222222222 22332 267777777654 678888876420 00134443
Q ss_pred cCCCCCccccceEEEEE-C--CEEEEEcccCCCCceeEEEeCCCCC----eEec-----CCCCCCCCCC--ceEEEee--
Q 016368 235 QLKDGRFSREAVEAVGF-K--GNLCMVNLKGNGAKDGAIYNVELDK----WKEM-----PEGMHAGWNG--PAASTMN-- 298 (390)
Q Consensus 235 ~~~~~~~~r~~~~~~~~-~--g~lyv~gg~g~~~~~~~~yd~~~~~----W~~~-----~~~~~~~~~~--~~~~~~~-- 298 (390)
.+...... ..+++.. + +.+++.|+ ....+.+||..+.+ |... ....+..... ..+....
T Consensus 105 ~~~~~~~~--v~~~~~~~~~~~~~l~~~~---~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 179 (351)
T 3f3f_A 105 TLNDSKGS--LYSVKFAPAHLGLKLACLG---NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSR 179 (351)
T ss_dssp EECCCSSC--EEEEEECCGGGCSEEEEEE---TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCS
T ss_pred eecccCCc--eeEEEEcCCCCCcEEEEec---CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCC
Confidence 33221110 1233332 2 55555531 23456788887653 3210 0101111111 1222111
Q ss_pred -CCeEEEEeCCCCcEEEEECCCCceEEccccccccccee-EEEE-CC----EEEEEeeCCceEEEEEcCCC
Q 016368 299 -EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEK-ITAA-RG----RVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 -~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~-~~~~-~g----~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.++++++.++.+..++........+..+........ +... ++ .+++.|+.+..|.+||+...
T Consensus 180 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 180 FSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp SSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred CCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 37888888888888777777777766665554444333 3333 33 67777777888999998763
No 248
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.20 E-value=4.2 Score=37.52 Aligned_cols=149 Identities=7% Similarity=-0.034 Sum_probs=80.2
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEE-cccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEK-KAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~-~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd 272 (390)
++.+++.|+.+. .+.+||..+.. -.. +...+.... ..+++.. ++++.+.|+ ....+.+||
T Consensus 181 ~~~~l~~~~~d~--------~i~iwd~~~~~----~~~~~~~~~h~~~---v~~~~~s~~~~~l~s~~---~dg~i~iwd 242 (437)
T 3gre_A 181 EKSLLVALTNLS--------RVIIFDIRTLE----RLQIIENSPRHGA---VSSICIDEECCVLILGT---TRGIIDIWD 242 (437)
T ss_dssp SCEEEEEEETTS--------EEEEEETTTCC----EEEEEECCGGGCC---EEEEEECTTSCEEEEEE---TTSCEEEEE
T ss_pred CCCEEEEEeCCC--------eEEEEeCCCCe----eeEEEccCCCCCc---eEEEEECCCCCEEEEEc---CCCeEEEEE
Confidence 467777777654 78999998876 221 111101111 1223322 566666642 234477899
Q ss_pred CCCCCeEecCCCCCCCCCCceEEE----eeCCeEEEEeCCCCcEEEEECCCCceEEccc-c----------c--------
Q 016368 273 VELDKWKEMPEGMHAGWNGPAAST----MNEEELYVVNEGKGRLSKYDADHDWWDEVIE-L----------A-------- 329 (390)
Q Consensus 273 ~~~~~W~~~~~~~~~~~~~~~~~~----~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~-~----------p-------- 329 (390)
+.+.+....-. .........++. ..++.+++.|+.++.+..||..+..-...-. . |
T Consensus 243 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (437)
T 3gre_A 243 IRFNVLIRSWS-FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEEL 321 (437)
T ss_dssp TTTTEEEEEEB-CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGC
T ss_pred cCCccEEEEEe-cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccc
Confidence 98764432111 011111111111 0246677888888899999998665222110 0 0
Q ss_pred ------ccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 330 ------ELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 330 ------~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
......+++..++.+++.|+.+..|.+||+.+.
T Consensus 322 ~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 322 NFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp CCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCG
T ss_pred eecccccCCceEEEEECCceEEEecCCCCeEEEEECCCc
Confidence 001122344457777777777889999999875
No 249
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.16 E-value=5.7 Score=35.01 Aligned_cols=144 Identities=8% Similarity=0.120 Sum_probs=76.7
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
+++.++.|+.+. .+.+||..++.. ...+..- ... -.+++. -++.+.+.|+ ....+.+||.
T Consensus 76 dg~~l~s~s~D~--------~v~~wd~~~~~~---~~~~~~h-~~~----v~~~~~~~~~~~l~s~s---~D~~i~vwd~ 136 (319)
T 3frx_A 76 DGAYALSASWDK--------TLRLWDVATGET---YQRFVGH-KSD----VMSVDIDKKASMIISGS---RDKTIKVWTI 136 (319)
T ss_dssp TSSEEEEEETTS--------EEEEEETTTTEE---EEEEECC-SSC----EEEEEECTTSCEEEEEE---TTSCEEEEET
T ss_pred CCCEEEEEeCCC--------EEEEEECCCCCe---eEEEccC-CCc----EEEEEEcCCCCEEEEEe---CCCeEEEEEC
Confidence 566666776654 788999988761 1222111 111 122222 2455555532 2345678888
Q ss_pred CCCCeEecCCCCCCCCCCceEEEe------eCCeEEEEeCCCCcEEEEECCCCceEEcccccccccce-eEEEE-CCEEE
Q 016368 274 ELDKWKEMPEGMHAGWNGPAASTM------NEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAE-KITAA-RGRVC 345 (390)
Q Consensus 274 ~~~~W~~~~~~~~~~~~~~~~~~~------~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~-~~~~~-~g~l~ 345 (390)
....-..+.. .......+... .++.+++.++.++.+..||..+..- ...+....... +++.. +|+++
T Consensus 137 ~~~~~~~~~~---h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~--~~~~~~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 137 KGQCLATLLG---HNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI--EADFIGHNSNINTLTASPDGTLI 211 (319)
T ss_dssp TSCEEEEECC---CSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE--EEEECCCCSCEEEEEECTTSSEE
T ss_pred CCCeEEEEec---cCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh--heeecCCCCcEEEEEEcCCCCEE
Confidence 6544333221 11111111110 1455777888899999999886432 22222222222 23333 67777
Q ss_pred EEeeCCceEEEEEcCCC
Q 016368 346 AVCENGERIMVVDVLAS 362 (390)
Q Consensus 346 i~g~~~~~v~~~d~~~~ 362 (390)
+.|+.+..|.+||+.+.
T Consensus 212 ~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp EEEETTCEEEEEETTTT
T ss_pred EEEeCCCeEEEEECCCC
Confidence 77777889999998765
No 250
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.13 E-value=2.6 Score=38.91 Aligned_cols=94 Identities=7% Similarity=0.040 Sum_probs=58.0
Q ss_pred eeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEE
Q 016368 267 DGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCA 346 (390)
Q Consensus 267 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i 346 (390)
.+.++|..+++-..+-........-.+++...+|..++.|+.++.+..||.++.+- +..+........+...++.+.+
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~--~~~~~~h~~~v~~~s~~~~~l~ 203 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR--LRNMTSHSARVGSLSWNSYILS 203 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEETTEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcE--EEEEeCCCCceEEEeeCCCEEE
Confidence 34456666665444322011111222333335789999999999999999987643 3333333334445556778888
Q ss_pred EeeCCceEEEEEcCCC
Q 016368 347 VCENGERIMVVDVLAS 362 (390)
Q Consensus 347 ~g~~~~~v~~~d~~~~ 362 (390)
.|+.+..+.++|....
T Consensus 204 sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 204 SGSRSGHIHHHDVRVA 219 (420)
T ss_dssp EEETTSEEEEEETTSS
T ss_pred EEeCCCceeEeeeccc
Confidence 8788888999998764
No 251
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=92.11 E-value=6.4 Score=35.34 Aligned_cols=64 Identities=11% Similarity=0.209 Sum_probs=44.1
Q ss_pred eCCeEEEEeCCCCc-EEEEECCCCceEEcccccc--cccce-eEEEE-CCEEEEEeeCCceEEEEEcCCCC
Q 016368 298 NEEELYVVNEGKGR-LSKYDADHDWWDEVIELAE--LKGAE-KITAA-RGRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 298 ~~g~lyv~gg~~~~-v~~yd~~~~~W~~i~~~p~--~r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
.+|++++.|+.++. +..||..+.+- +..+.. ..... +++.. +++.++.++.+..+.+||+....
T Consensus 205 ~~g~~l~s~s~d~~~v~iwd~~~~~~--~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 205 RKSDMVATCSQDGTIIRVFKTEDGVL--VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TTSSEEEEEETTCSEEEEEETTTCCE--EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcE--EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 57899999999998 99999987543 333321 22222 33333 67777777888899999997754
No 252
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.06 E-value=4.4 Score=40.47 Aligned_cols=58 Identities=9% Similarity=0.073 Sum_probs=31.9
Q ss_pred CeEEEEECCCC---ccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCC
Q 016368 214 RSMKKWDLKSD---REDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPE 283 (390)
Q Consensus 214 ~~~~~yd~~t~---~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~ 283 (390)
..++++|..++ . -+.+...... . ......-+|+..+++ ....+.++|+.+++...+..
T Consensus 129 ~~i~~~d~~~~~~~~----~~~l~~~~~~-~---~~~~~SPDG~~la~~----~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 129 GELYLYDLKQEGKAA----VRQLTHGEGF-A---TDAKLSPKGGFVSFI----RGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp TEEEEEESSSCSTTS----CCBCCCSSSC-E---EEEEECTTSSEEEEE----ETTEEEEEETTTTEEEECCC
T ss_pred CcEEEEECCCCCcce----EEEcccCCcc-c---ccccCCCCCCEEEEE----eCCcEEEEecCCCCEEEecc
Confidence 48899999887 5 4443332111 1 111222366644443 22467788988877666543
No 253
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.01 E-value=3.6 Score=36.13 Aligned_cols=141 Identities=6% Similarity=0.016 Sum_probs=76.9
Q ss_pred CEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCC
Q 016368 196 GVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVE 274 (390)
Q Consensus 196 ~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~ 274 (390)
+.||+.+-.. ..+..|++ ++. .+.+.... .. ..+.+. -+|++|+.. .+...+.+||+.
T Consensus 57 ~~l~~~d~~~--------~~i~~~~~-~g~----~~~~~~~~-~~----~~gl~~d~dG~l~v~~---~~~~~v~~~~~~ 115 (305)
T 3dr2_A 57 RTLVWSDLVG--------RRVLGWRE-DGT----VDVLLDAT-AF----TNGNAVDAQQRLVHCE---HGRRAITRSDAD 115 (305)
T ss_dssp TEEEEEETTT--------TEEEEEET-TSC----EEEEEESC-SC----EEEEEECTTSCEEEEE---TTTTEEEEECTT
T ss_pred CEEEEEECCC--------CEEEEEeC-CCC----EEEEeCCC-Cc----cceeeECCCCCEEEEE---CCCCEEEEECCC
Confidence 4577775433 36888888 444 33332211 11 133332 378888873 123467788886
Q ss_pred CCCeEecCCCCCCC--CCCceEEEeeCCeEEEE----eCC-------------CCcEEEEECCCCceEEcccccccccce
Q 016368 275 LDKWKEMPEGMHAG--WNGPAASTMNEEELYVV----NEG-------------KGRLSKYDADHDWWDEVIELAELKGAE 335 (390)
Q Consensus 275 ~~~W~~~~~~~~~~--~~~~~~~~~~~g~lyv~----gg~-------------~~~v~~yd~~~~~W~~i~~~p~~r~~~ 335 (390)
++.+.+....... ..-..+++.-+|.||+. |.. .+.+++||+++.+.+.+. ......
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p~ 191 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHPN 191 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCCCc
Confidence 6666553311111 11123333368999985 221 247999999888877764 122223
Q ss_pred eEEEE-CC-EEEEEeeC-----CceEEEEEcCC
Q 016368 336 KITAA-RG-RVCAVCEN-----GERIMVVDVLA 361 (390)
Q Consensus 336 ~~~~~-~g-~l~i~g~~-----~~~v~~~d~~~ 361 (390)
+++.. ++ .||+.... ...|+++|+..
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 44444 44 47776443 25788888764
No 254
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=91.79 E-value=5.2 Score=36.03 Aligned_cols=196 Identities=10% Similarity=-0.009 Sum_probs=91.3
Q ss_pred ceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee--cCeEEEEEeecCCCCCCCCCcEEEeCCCCce
Q 016368 99 SMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV--RNNLVLIAATTPHFLPALASPLAFNPQSNTW 176 (390)
Q Consensus 99 ~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W 176 (390)
...++.+|+.+++-..+...+. ... ..... ++..+++... .........++++|..+...
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~--~~~---------------~~~~sp~dg~~l~~~~~-~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQ--WLG---------------HPIYRPYDDSTVAFCHE-GPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESS--CEE---------------EEEEETTEEEEEEEEEC-SCTTTSSCSEEEEETTSCCC
T ss_pred cceEEEEECCCCceEEeecCCc--ccc---------------ccEECCCCCCEEEEEEe-cCCCCCcceEEEEeCCCCce
Confidence 3568889988877655542221 000 22222 3343433332 11112346899999988776
Q ss_pred ecCCCCCCCCcceEEEEE-CCE-EEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc---cccceEEEEE
Q 016368 177 FFGPQLSIPRRWCAMGSV-GGV-VYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF---SREAVEAVGF 251 (390)
Q Consensus 177 ~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~---~r~~~~~~~~ 251 (390)
+.+............+.. +|+ |+..+.... .....++++|+.++. -+.+...+.... ..... ...-
T Consensus 229 ~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~~l~~~d~~~g~----~~~l~~~~~~~~~~~~~~~~-~~sp 299 (388)
T 3pe7_A 229 RKVKTHAEGESCTHEFWVPDGSALVYVSYLKG----SPDRFIYSADPETLE----NRQLTSMPACSHLMSNYDGS-LMVG 299 (388)
T ss_dssp EESCCCCTTEEEEEEEECTTSSCEEEEEEETT----CCCEEEEEECTTTCC----EEEEEEECCEEEEEECTTSS-EEEE
T ss_pred EEeeeCCCCcccccceECCCCCEEEEEecCCC----CCcceEEEEecCCCc----eEEEEcCCCceeeeecCCCC-eEcc
Confidence 665443211111111222 554 544433222 122359999999988 666544432000 00001 1223
Q ss_pred CCE-EEEEccc-----CCCCceeEEEeCCCCCeEecCCCCCCCC---------CCceEEEeeCCeEEEE-eCCCC--cEE
Q 016368 252 KGN-LCMVNLK-----GNGAKDGAIYNVELDKWKEMPEGMHAGW---------NGPAASTMNEEELYVV-NEGKG--RLS 313 (390)
Q Consensus 252 ~g~-lyv~gg~-----g~~~~~~~~yd~~~~~W~~~~~~~~~~~---------~~~~~~~~~~g~lyv~-gg~~~--~v~ 313 (390)
+|+ +++.... ..+...+.++|+.+++-+.+.... ... .....+...+|+.+++ ...++ .++
T Consensus 300 dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 300 DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHD-TSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp EECCC------------CCCCEEEEEETTTTEEEEEEECC-CCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred CCCcceeEeeeccccccCCCCEEEEEeccCCceEEecccc-CcccccccccccCCCCccCCCCCCEEEEEecCCCceeEE
Confidence 333 3322100 023456778898887766554311 100 1112222256754444 43333 788
Q ss_pred EEECCCCce
Q 016368 314 KYDADHDWW 322 (390)
Q Consensus 314 ~yd~~~~~W 322 (390)
.+|.....|
T Consensus 379 ~~~l~~~~~ 387 (388)
T 3pe7_A 379 LATLPESVW 387 (388)
T ss_dssp EEECCGGGG
T ss_pred EEECChhcc
Confidence 888877666
No 255
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.59 E-value=5.3 Score=35.00 Aligned_cols=175 Identities=10% Similarity=0.043 Sum_probs=87.2
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCC-Cc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDG-RF 241 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~-~~ 241 (390)
+.+++|++ +++.+..... .. .-.+.+.. +|+||+.... ...+.+||+. ++ .+.+...... ..
T Consensus 67 ~~i~~~~~-~g~~~~~~~~-~~-~~~gl~~d~dG~l~v~~~~--------~~~v~~~~~~-g~----~~~~~~~~~~~~~ 130 (305)
T 3dr2_A 67 RRVLGWRE-DGTVDVLLDA-TA-FTNGNAVDAQQRLVHCEHG--------RRAITRSDAD-GQ----AHLLVGRYAGKRL 130 (305)
T ss_dssp TEEEEEET-TSCEEEEEES-CS-CEEEEEECTTSCEEEEETT--------TTEEEEECTT-SC----EEEEECEETTEEC
T ss_pred CEEEEEeC-CCCEEEEeCC-CC-ccceeeECCCCCEEEEECC--------CCEEEEECCC-CC----EEEEEeccCCCcc
Confidence 57888988 4544332211 11 11222222 6788876422 1367888886 55 5554321111 10
Q ss_pred cccceEEE-EECCEEEEE----cccC----------CCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe-EEEE
Q 016368 242 SREAVEAV-GFKGNLCMV----NLKG----------NGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE-LYVV 305 (390)
Q Consensus 242 ~r~~~~~~-~~~g~lyv~----gg~g----------~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~-lyv~ 305 (390)
.+ ...++ --+|++|+. |... .....+..||+++++.+.+. ....+ .+++...+++ ||+.
T Consensus 131 ~~-~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p---~gl~~spdg~~lyv~ 205 (305)
T 3dr2_A 131 NS-PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP---NGLAFSPDEQTLYVS 205 (305)
T ss_dssp SC-CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE---EEEEECTTSSEEEEE
T ss_pred CC-CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC---cceEEcCCCCEEEEE
Confidence 00 12233 247889985 2110 01234678898888777654 12111 1333324565 7877
Q ss_pred eCCC-----CcEEEEECCCCceEEc---ccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 306 NEGK-----GRLSKYDADHDWWDEV---IELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 306 gg~~-----~~v~~yd~~~~~W~~i---~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.... +.+++||...+..... ...+ .....++..- +|.||+-. ...|.+||+...
T Consensus 206 ~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~-~~~pdgi~~d~~G~lwv~~--~~gv~~~~~~g~ 268 (305)
T 3dr2_A 206 QTPEQGHGSVEITAFAWRDGALHDRRHFASVP-DGLPDGFCVDRGGWLWSSS--GTGVCVFDSDGQ 268 (305)
T ss_dssp ECCC---CCCEEEEEEEETTEEEEEEEEECCS-SSCCCSEEECTTSCEEECC--SSEEEEECTTSC
T ss_pred ecCCcCCCCCEEEEEEecCCCccCCeEEEECC-CCCCCeEEECCCCCEEEec--CCcEEEECCCCC
Confidence 6542 6899999876542211 1111 1112234443 67777753 345888887544
No 256
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=91.53 E-value=7.2 Score=34.69 Aligned_cols=63 Identities=10% Similarity=0.093 Sum_probs=36.1
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+|+.++.|+.++.+..||.....- ....+........++.. ++.+... +.+..+.+||+.+.
T Consensus 223 ~~g~~l~sgs~dg~v~iwd~~~~~~-~~~~~~~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 223 PNGKYIATGGKDKKLLIWDILNLTY-PQREFDAGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMTQ 286 (343)
T ss_dssp TTSSEEEEEETTCEEEEEESSCCSS-CSEEEECSSCEEEEEECSSSCEEEE-EESSCEEEEESSSC
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcc-cceeecCCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCCC
Confidence 5788889999999999999843221 11111111111223333 4555554 44557889998764
No 257
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=91.49 E-value=7.2 Score=34.66 Aligned_cols=144 Identities=9% Similarity=0.091 Sum_probs=72.9
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccE-EcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWE-KKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~-~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd 272 (390)
++.+.+.|+.+. .+.+||..++. .. .+.. .... -.+++. -+++..+.|+ ....+.+||
T Consensus 87 ~~~~l~s~s~D~--------~v~lwd~~~~~----~~~~~~~-h~~~----v~~v~~sp~~~~l~s~~---~d~~i~~wd 146 (343)
T 2xzm_R 87 ENCFAISSSWDK--------TLRLWDLRTGT----TYKRFVG-HQSE----VYSVAFSPDNRQILSAG---AEREIKLWN 146 (343)
T ss_dssp STTEEEEEETTS--------EEEEEETTSSC----EEEEEEC-CCSC----EEEEEECSSTTEEEEEE---TTSCEEEEE
T ss_pred CCCEEEEEcCCC--------cEEEEECCCCc----EEEEEcC-CCCc----EEEEEECCCCCEEEEEc---CCCEEEEEe
Confidence 455666666554 78899998876 32 2211 1111 122332 2555555532 234567888
Q ss_pred CCCCCeEecCCCCCCCCCCceEEEeeC----------CeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--
Q 016368 273 VELDKWKEMPEGMHAGWNGPAASTMNE----------EELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-- 340 (390)
Q Consensus 273 ~~~~~W~~~~~~~~~~~~~~~~~~~~~----------g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-- 340 (390)
.....-...............+....+ +.+++.++.++.+..||... .....+.........+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~---~~~~~~~~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 147 ILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF---QIRYTFKAHESNVNHLSISP 223 (343)
T ss_dssp SSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT---EEEEEEECCSSCEEEEEECT
T ss_pred ccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC---ceeEEEcCccccceEEEECC
Confidence 764432222210011111111111111 25777888899999999442 222222222222222333
Q ss_pred CCEEEEEeeCCceEEEEEcCC
Q 016368 341 RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 341 ~g~l~i~g~~~~~v~~~d~~~ 361 (390)
+|+.++.|+.+..|.+||+..
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp TSSEEEEEETTCEEEEEESSC
T ss_pred CCCEEEEEcCCCeEEEEECCC
Confidence 677777777788999999844
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=91.47 E-value=3.5 Score=41.11 Aligned_cols=117 Identities=15% Similarity=0.115 Sum_probs=71.0
Q ss_pred EEEEECCEEEEEcccCCCCceeEEEeCCCC--CeEecCCCCCC-------CCCCceEEEeeCCeEEEEeCCCCcEEEEEC
Q 016368 247 EAVGFKGNLCMVNLKGNGAKDGAIYNVELD--KWKEMPEGMHA-------GWNGPAASTMNEEELYVVNEGKGRLSKYDA 317 (390)
Q Consensus 247 ~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~--~W~~~~~~~~~-------~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~ 317 (390)
+.++.+|++|+.. ....+..+|.+++ .|+.-...... .....+.++ .+++||+. ..++.++.+|.
T Consensus 61 ~P~v~~g~vyv~~----~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~-~~dg~l~alD~ 134 (668)
T 1kv9_A 61 TPLFHDGVIYTSM----SWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL-WGDKVYVG-TLDGRLIALDA 134 (668)
T ss_dssp CCEEETTEEEEEE----GGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-EBTEEEEE-CTTSEEEEEET
T ss_pred CCEEECCEEEEEC----CCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE-ECCEEEEE-cCCCEEEEEEC
Confidence 3456899999985 2345778998766 58875431110 001123344 67887765 45679999999
Q ss_pred CCCc--eEEccccccc--ccceeEEEECCEEEEEeeC-----CceEEEEEcCCCCCcceEec
Q 016368 318 DHDW--WDEVIELAEL--KGAEKITAARGRVCAVCEN-----GERIMVVDVLASPARAWLVD 370 (390)
Q Consensus 318 ~~~~--W~~i~~~p~~--r~~~~~~~~~g~l~i~g~~-----~~~v~~~d~~~~~~~~W~~~ 370 (390)
++.+ |+.-..-+.. ....+.++.+++||+-... ...++.+|..+.. ..|...
T Consensus 135 ~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~-~~W~~~ 195 (668)
T 1kv9_A 135 KTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGK-LAWRFY 195 (668)
T ss_dssp TTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC-EEEEEE
T ss_pred CCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCc-EEEEec
Confidence 8765 8764321111 1122345568888875432 2579999998763 358854
No 259
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=91.27 E-value=3.2 Score=41.48 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=71.4
Q ss_pred EEEECCEEEEEcccCCCCceeEEEeCCCC--CeEecCCCCCC-------CCCCceEEEeeCCeEEEEeCCCCcEEEEECC
Q 016368 248 AVGFKGNLCMVNLKGNGAKDGAIYNVELD--KWKEMPEGMHA-------GWNGPAASTMNEEELYVVNEGKGRLSKYDAD 318 (390)
Q Consensus 248 ~~~~~g~lyv~gg~g~~~~~~~~yd~~~~--~W~~~~~~~~~-------~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~ 318 (390)
.++.+|++|+.+ ....+..+|.+++ .|+.-...... .....+.++ .+++||+.. .++.++.+|.+
T Consensus 73 P~v~~g~vyv~~----~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~-~dg~l~alD~~ 146 (677)
T 1kb0_A 73 PVVVDGIMYVSA----SWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGA-WDGRLIALDAA 146 (677)
T ss_dssp CEEETTEEEEEC----GGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEEC-TTSEEEEEETT
T ss_pred CEEECCEEEEEC----CCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEc-CCCEEEEEECC
Confidence 456899999985 2345788998876 69875441111 011223444 678777654 46789999998
Q ss_pred CCc--eEEccc-ccc--cccceeEEEECCEEEEEeeC-----CceEEEEEcCCCCCcceEec
Q 016368 319 HDW--WDEVIE-LAE--LKGAEKITAARGRVCAVCEN-----GERIMVVDVLASPARAWLVD 370 (390)
Q Consensus 319 ~~~--W~~i~~-~p~--~r~~~~~~~~~g~l~i~g~~-----~~~v~~~d~~~~~~~~W~~~ 370 (390)
+.+ |+.-.. -+. .......++.+++||+.... ...|+.+|..+.. ..|...
T Consensus 147 tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~-~~W~~~ 207 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGE-RKWRWF 207 (677)
T ss_dssp TCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCC-EEEEEE
T ss_pred CCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCc-EEEEec
Confidence 765 876432 111 11122345568888886542 3579999998763 368853
No 260
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=90.89 E-value=9.8 Score=35.49 Aligned_cols=133 Identities=8% Similarity=-0.067 Sum_probs=73.6
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcceEEEEE--CC-EEEEEeccCCCCCCCccCeEEEEECCCCccccccE---EcccCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV--GG-VVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWE---KKAQLK 237 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~---~~~~~~ 237 (390)
+.+.++|+.+++...+.. .-.......+ ++ .||+...... .....+..++... . |. .++.+.
T Consensus 159 ~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~----~~~~~v~~~~~~g-~----~~~~~~l~~~~ 226 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNN----NDRPNNYILTRES-G----FKVITELTKGQ 226 (430)
T ss_dssp EEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSC----TTSEEEEEEEGGG-T----SCSEEEEEECS
T ss_pred CcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCC----cccceEEEEeCCC-c----eeeeeeeccCC
Confidence 678999999887766533 1122222222 34 5998865332 1223456666543 3 33 333332
Q ss_pred CCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe-EEEEeCCCCcEEE
Q 016368 238 DGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE-LYVVNEGKGRLSK 314 (390)
Q Consensus 238 ~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~ 314 (390)
.+ +.+++. +|.||+. ..+...+.+||+.+..-..+.. .+.......+++..+|+ ||+.....+.|++
T Consensus 227 ~p------~giavdp~~g~lyv~---d~~~~~V~~~~~~~~~~~~~~~-~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 227 NC------NGAETHPINGELYFN---SWNAGQVFRYDFTTQETTPLFT-IQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp SC------CCEEECTTTCCEEEE---ETTTTEEEEEETTTTEEEEEEE-CSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred Cc------eEEEEeCCCCEEEEE---ECCCCEEEEEECCCCcEEEEEE-cCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 22 344443 6889988 2344568899998765433322 11111112344324566 9999887888888
Q ss_pred EECC
Q 016368 315 YDAD 318 (390)
Q Consensus 315 yd~~ 318 (390)
|+..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 7655
No 261
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=90.83 E-value=14 Score=36.76 Aligned_cols=104 Identities=7% Similarity=0.004 Sum_probs=53.3
Q ss_pred eEEEEECCC-CccccccEEcccC-CCCCccccceEEEEECCEEEEEccc--CCCCceeEEEeCCCCCeEecCCCCCCCC-
Q 016368 215 SMKKWDLKS-DREDWKWEKKAQL-KDGRFSREAVEAVGFKGNLCMVNLK--GNGAKDGAIYNVELDKWKEMPEGMHAGW- 289 (390)
Q Consensus 215 ~~~~yd~~t-~~~~~~W~~~~~~-~~~~~~r~~~~~~~~~g~lyv~gg~--g~~~~~~~~yd~~~~~W~~~~~~~~~~~- 289 (390)
.++++|..+ +. -..+... ..... ...... -+|+..+++.. +.....+.++|+.+.+...+.......+
T Consensus 264 ~l~~~d~~~~~~----~~~~~~~~~~~~~--~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 336 (741)
T 2ecf_A 264 KLGVISPAEQAQ----TQWIDLGKEQDIY--LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWV 336 (741)
T ss_dssp EEEEECSSTTCC----CEEECCCSCSSEE--EEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred EEEEEECCCCCc----eEEecCCCCcceE--EEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcC
Confidence 788889988 76 4444322 11111 012222 45554443221 2123456788998887665432111111
Q ss_pred -CCceEEEeeCCeEEEEeCCCC--cEEEEECCCCceEEcc
Q 016368 290 -NGPAASTMNEEELYVVNEGKG--RLSKYDADHDWWDEVI 326 (390)
Q Consensus 290 -~~~~~~~~~~g~lyv~gg~~~--~v~~yd~~~~~W~~i~ 326 (390)
....++...+|++++.+..++ .+|.+|.... ...+.
T Consensus 337 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 337 PLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred CcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 111222226888777776665 7888887655 55544
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.68 E-value=10 Score=36.95 Aligned_cols=118 Identities=19% Similarity=0.212 Sum_probs=67.7
Q ss_pred EEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC---ccccceEEEEECCEEEEEcccCCCCce
Q 016368 191 MGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR---FSREAVEAVGFKGNLCMVNLKGNGAKD 267 (390)
Q Consensus 191 ~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~---~~r~~~~~~~~~g~lyv~gg~g~~~~~ 267 (390)
-++.+++||+.+.. ..+.++|.+|++. .|+.-...+... +.....+.++.++++|+.. ....
T Consensus 64 P~v~~g~vyv~~~~---------~~v~AlD~~tG~~--~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t----~dg~ 128 (582)
T 1flg_A 64 AIVSDGVIYVTASY---------SRLFALDAKTGKR--LWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT----LDAS 128 (582)
T ss_dssp CEEETTEEEEEETT---------TEEEEEESSSCCE--EEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE----TTTE
T ss_pred cEEECCEEEEEcCC---------CCEEEEECCCCcE--EEEEcCCCCcccccccccCCCccEEECCEEEEEe----CCCE
Confidence 45679999997643 1488999988773 387644332210 0000123456899999864 3345
Q ss_pred eEEEeCCCC--CeEecCCCCCCCC-CCceEEEeeCC------eEEEEeC-----CCCcEEEEECCCCc--eEE
Q 016368 268 GAIYNVELD--KWKEMPEGMHAGW-NGPAASTMNEE------ELYVVNE-----GKGRLSKYDADHDW--WDE 324 (390)
Q Consensus 268 ~~~yd~~~~--~W~~~~~~~~~~~-~~~~~~~~~~g------~lyv~gg-----~~~~v~~yd~~~~~--W~~ 324 (390)
+..+|.+++ .|+.......... ...+.++ .++ .||+-.. .++.++.||.++.+ |+.
T Consensus 129 l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v-~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 129 VVALNKNTGKVVWKKKFADHGAGYTMTGAPTI-VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEEESSSCCEEEEEECSCGGGTCBCCSCCEE-EECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCCEEeeecCCCCCcCcccccCCEE-eCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 788999877 5886433111111 1112222 455 5554321 25689999998765 864
No 263
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.53 E-value=11 Score=35.16 Aligned_cols=176 Identities=10% Similarity=-0.008 Sum_probs=92.1
Q ss_pred CCcEEEeCCCCceecCCCCCCCCcce-EEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCcccccc-EEcccCCCCC
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPRRWC-AMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKW-EKKAQLKDGR 240 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W-~~~~~~~~~~ 240 (390)
+.+.++|+.+++...+.. .-... ++++. ++.||+.--... .....+..++..... .+ ..++.+..+
T Consensus 162 ~~I~~id~~~g~v~~~~~---~~~~P~giavd~dG~lyVad~~~~----~~~~gv~~~~~~~~~---~~~~~~~~~~~P- 230 (433)
T 4hw6_A 162 DAFRHVDFVNQYVDIKTT---NIGQCADVNFTLNGDMVVVDDQSS----DTNTGIYLFTRASGF---TERLSLCNARGA- 230 (433)
T ss_dssp SCEEEEETTTTEEEEECC---CCSCEEEEEECTTCCEEEEECCSC----TTSEEEEEECGGGTT---CCEEEEEECSSB-
T ss_pred CCEEEEECCCCEEEEeec---CCCCccEEEECCCCCEEEEcCCCC----cccceEEEEECCCCe---eccccccccCCC-
Confidence 689999999888776543 11122 22222 556998753321 112245555554321 01 123322221
Q ss_pred ccccceEEEEE--CCEEEEEcccCCCCceeEEEeCCCCCe-EecCCCCCCCCCCceEEEeeCC-eEEEEeCCCCcEEEEE
Q 016368 241 FSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVELDKW-KEMPEGMHAGWNGPAASTMNEE-ELYVVNEGKGRLSKYD 316 (390)
Q Consensus 241 ~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd 316 (390)
..+++. +|.||+.. .....+.+||+.+.+- ..+......+ ....+++..+| .||+.....+.|+++|
T Consensus 231 -----~giavd~~~G~lyv~d---~~~~~V~~~d~~~g~~~~~~~~~~~~~-~~~~ia~dpdG~~LYvad~~~~~I~~~~ 301 (433)
T 4hw6_A 231 -----KTCAVHPQNGKIYYTR---YHHAMISSYDPATGTLTEEEVMMDTKG-SNFHIVWHPTGDWAYIIYNGKHCIYRVD 301 (433)
T ss_dssp -----CCCEECTTTCCEEECB---TTCSEEEEECTTTCCEEEEEEECSCCS-SCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred -----CEEEEeCCCCeEEEEE---CCCCEEEEEECCCCeEEEEEeccCCCC-CcccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 233333 68899872 2345678999986665 2221101111 11234432455 4999998788999977
Q ss_pred CC--CCceE---Ec-cccc------------ccccceeEEE----------ECCEEEEEeeCCceEEEEEc
Q 016368 317 AD--HDWWD---EV-IELA------------ELKGAEKITA----------ARGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 317 ~~--~~~W~---~i-~~~p------------~~r~~~~~~~----------~~g~l~i~g~~~~~v~~~d~ 359 (390)
.. +.... .+ .... ......++++ .+|.|||.-..++.|..+|.
T Consensus 302 ~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 302 YNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp BCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred CCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC
Confidence 54 33221 11 1100 1112345665 36789988555678888875
No 264
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=90.38 E-value=7.6 Score=35.64 Aligned_cols=105 Identities=11% Similarity=0.092 Sum_probs=56.9
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCC--CeEecC--CCCCCCCCC--ceEEEeeCC-eEEEEeCCCCcEEEEECCCCce--
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELD--KWKEMP--EGMHAGWNG--PAASTMNEE-ELYVVNEGKGRLSKYDADHDWW-- 322 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~--~W~~~~--~~~~~~~~~--~~~~~~~~g-~lyv~gg~~~~v~~yd~~~~~W-- 322 (390)
++++++.| ....+.+||+.+. .+..+. +........ .+++...++ .+++.|+.++.+..||..+..-
T Consensus 188 ~~~~l~s~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 188 DYETYLSA----DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp TSSEEEEE----CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred CCCEEEEe----CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 55666663 3455678888732 233221 100011111 222222345 8889999999999999987663
Q ss_pred ---EEccccccc---------ccce-eEEEE-CCEEEEEeeCCceEEEEEcCC
Q 016368 323 ---DEVIELAEL---------KGAE-KITAA-RGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 323 ---~~i~~~p~~---------r~~~-~~~~~-~g~l~i~g~~~~~v~~~d~~~ 361 (390)
..+.....+ .... .+... +|++++.++. ..+.+||+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 222211000 0122 23333 6777777676 8999999975
No 265
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=90.24 E-value=11 Score=34.45 Aligned_cols=62 Identities=13% Similarity=0.213 Sum_probs=40.3
Q ss_pred CCeEEEEeC---------CCCcEEEEECCCCceEEcccccccccceeEEEE-CCE--EEEEeeCCceEEEEEcCCC
Q 016368 299 EEELYVVNE---------GKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR--VCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg---------~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~--l~i~g~~~~~v~~~d~~~~ 362 (390)
+++||+... ..+.++++|.++. +.+..++......++... +|+ +|+.....+.|.++|..+.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCC--EEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 478888653 1348999998764 444555544445566555 555 5554335779999999876
No 266
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.10 E-value=10 Score=34.72 Aligned_cols=185 Identities=9% Similarity=0.062 Sum_probs=92.7
Q ss_pred CcEEEeCCC--CceecCCCCCCCCcceEEEEE---CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccC---
Q 016368 165 SPLAFNPQS--NTWFFGPQLSIPRRWCAMGSV---GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQL--- 236 (390)
Q Consensus 165 ~~~~~dp~t--~~W~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~--- 236 (390)
.+++++... .+|+.+.+......-++++.. .+.||+.+.... .-..++..+-...+ |+.+...
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~-----~g~gl~~s~D~G~t----W~~~~~~~~~ 102 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH-----LGPTVFRSDDGGGN----WTEATRPPAF 102 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-------CCEEEEEESSTTSC----CEECSBCCCC
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC-----CCccEEEeCCCCCC----ceECCccccC
Confidence 366777654 689876422222223344443 467887654321 11245666556677 9988642
Q ss_pred CCCCc-----c-ccceEEEEE----CCEEEEEcccCCCCceeEEEeCCCCCeEecCCC--CCC--------------CCC
Q 016368 237 KDGRF-----S-REAVEAVGF----KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEG--MHA--------------GWN 290 (390)
Q Consensus 237 ~~~~~-----~-r~~~~~~~~----~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~--~~~--------------~~~ 290 (390)
+.... . ....++++. .+.+|+.+ ....+...+-...+|+.+... .+. ...
T Consensus 103 ~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~----~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 103 NKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT----SPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCC----CCCCCEEEEEEECCTTSTTCEEEEE----ETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred CCcccccccccccceeEEEeCCCCCCCEEEEEe----cCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 11100 0 001223332 57788763 122344555566799987431 011 001
Q ss_pred CceEEEee---CCeEEEEeCCCCcEEEEECCCCceEEcccc------ccc-----ccceeEEEE-C--CEEEEEeeCCce
Q 016368 291 GPAASTMN---EEELYVVNEGKGRLSKYDADHDWWDEVIEL------AEL-----KGAEKITAA-R--GRVCAVCENGER 353 (390)
Q Consensus 291 ~~~~~~~~---~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~------p~~-----r~~~~~~~~-~--g~l~i~g~~~~~ 353 (390)
...+++ . .+.||+... .+.+++.+-...+|+.+..- |.. ...+.++.. . +.||+. .. ..
T Consensus 179 i~~i~~-d~~~~~~l~vg~~-~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg-~~-~g 254 (394)
T 3b7f_A 179 MHSILV-DPRDPKHLYIGMS-SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQ-NH-CG 254 (394)
T ss_dssp EEEEEE-CTTCTTCEEEEEE-TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEE-ET-TE
T ss_pred eeEEEE-CCCCCCEEEEEEC-CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEE-cC-Ce
Confidence 123332 2 356776543 34688888888899988531 111 112344443 2 567764 32 34
Q ss_pred EEEEEcCCCCCcceEe
Q 016368 354 IMVVDVLASPARAWLV 369 (390)
Q Consensus 354 v~~~d~~~~~~~~W~~ 369 (390)
++..+-... .|+.
T Consensus 255 l~~s~D~G~---tW~~ 267 (394)
T 3b7f_A 255 IYRMDRREG---VWKR 267 (394)
T ss_dssp EEEEETTTT---EEEC
T ss_pred EEEeCCCCC---cceE
Confidence 666664444 7873
No 267
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=90.07 E-value=11 Score=34.56 Aligned_cols=63 Identities=10% Similarity=0.178 Sum_probs=41.8
Q ss_pred eCCeEEEEeCC---------CCcEEEEECCCCceEEcccccccccceeEEEE-CCE--EEEEeeCCceEEEEEcCCC
Q 016368 298 NEEELYVVNEG---------KGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR--VCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 298 ~~g~lyv~gg~---------~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~--l~i~g~~~~~v~~~d~~~~ 362 (390)
-+++||+.-.. .+.++++|.++.+ .+..++......++.+. +++ +|+..+..++|.++|..+.
T Consensus 290 ~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 290 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--EEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CCCeEEEEeccccccccCCCCCEEEEEECCCCe--EEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 46899996431 1379999998755 44444444444556654 554 6665555779999999876
No 268
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=89.05 E-value=12 Score=38.78 Aligned_cols=186 Identities=11% Similarity=0.009 Sum_probs=92.2
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCcc
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDRE 226 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~ 226 (390)
+.+++.|+.. ..+.+||..+.+-.... .....-.+++...+++.+.|+.+ ..+.+||..+..
T Consensus 29 g~~lAsgs~D-------g~I~lw~~~~~~~~~~~--~~~~~V~~l~fspg~~L~S~s~D--------~~v~lWd~~~~~- 90 (902)
T 2oaj_A 29 QNLLAIATVT-------GEVHIYGQQQVEVVIKL--EDRSAIKEMRFVKGIYLVVINAK--------DTVYVLSLYSQK- 90 (902)
T ss_dssp TTEEEEEETT-------SEEEEECSTTCEEEEEC--SSCCCEEEEEEETTTEEEEEETT--------CEEEEEETTTCS-
T ss_pred CCEEEEEeCC-------CEEEEEeCCCcEEEEEc--CCCCCEEEEEEcCCCEEEEEECc--------CeEEEEECCCCc-
Confidence 4555555431 36778887655432211 11111223333345544444443 378899998876
Q ss_pred ccccEEcccCCCCCccccceEEEE-ECCEEEEEcccCCCCceeEEEeCCCCCeEecC--C-----CCCCCCC--CceEEE
Q 016368 227 DWKWEKKAQLKDGRFSREAVEAVG-FKGNLCMVNLKGNGAKDGAIYNVELDKWKEMP--E-----GMHAGWN--GPAAST 296 (390)
Q Consensus 227 ~~~W~~~~~~~~~~~~r~~~~~~~-~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~--~-----~~~~~~~--~~~~~~ 296 (390)
-...-..+. . -.+++. -+++..+.|. ....+.+||..+.+-.... . ....... ..+++.
T Consensus 91 ---~~~~~~~~~--~---V~~v~~sp~g~~l~sgs---~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~ 159 (902)
T 2oaj_A 91 ---VLTTVFVPG--K---ITSIDTDASLDWMLIGL---QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQW 159 (902)
T ss_dssp ---EEEEEECSS--C---EEEEECCTTCSEEEEEE---TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEE
T ss_pred ---EEEEEcCCC--C---EEEEEECCCCCEEEEEc---CCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEE
Confidence 221111111 1 122222 2455555531 2344678888876532110 0 0111111 223332
Q ss_pred ee-CCeEEEEeCCCCcEEEEECCCCceEEccccc---------------c-cccceeEEEE--CCEEEEEeeCCceEEEE
Q 016368 297 MN-EEELYVVNEGKGRLSKYDADHDWWDEVIELA---------------E-LKGAEKITAA--RGRVCAVCENGERIMVV 357 (390)
Q Consensus 297 ~~-~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p---------------~-~r~~~~~~~~--~g~l~i~g~~~~~v~~~ 357 (390)
.. ++.++++|+.++.+ .||..+.+-...-... . .......+.+ +|..++.|+.+..|.+|
T Consensus 160 sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 160 NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFW 238 (902)
T ss_dssp ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence 12 34677888888899 9999886543221111 0 0111222233 67777887888899999
Q ss_pred EcCCC
Q 016368 358 DVLAS 362 (390)
Q Consensus 358 d~~~~ 362 (390)
|+.+.
T Consensus 239 d~~~g 243 (902)
T 2oaj_A 239 DANSG 243 (902)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 98764
No 269
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=88.92 E-value=0.25 Score=45.44 Aligned_cols=110 Identities=12% Similarity=0.084 Sum_probs=49.0
Q ss_pred EEEECCEEEEEcccCCCCceeEEEeCCCC--CeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCC--ceE
Q 016368 248 AVGFKGNLCMVNLKGNGAKDGAIYNVELD--KWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHD--WWD 323 (390)
Q Consensus 248 ~~~~~g~lyv~gg~g~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~--~W~ 323 (390)
.++.++.+|+.+ ....+.++|.+++ .|+.... . .....++ .+|.+|+.+..++.++.+|.++. .|+
T Consensus 5 P~v~~~~v~~gs----~dg~v~a~d~~tG~~~W~~~~~-~----~~s~p~~-~~g~~~v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 5 VTLPETLLFVST----LDGSLHAVSKRTGSIKWTLKED-P----VLQVPTH-VEEPAFLPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp ---CTTEEEEEE----TTSEEEEEETTTCCEEEEEECC-C----SCCCC------CCEEECTTTCCEEEC-----CCSEE
T ss_pred CeeeCCEEEEEc----CCCEEEEEECCCCCEEEEecCC-C----ceecceE-cCCCEEEEeCCCCEEEEEECCCCceeee
Confidence 445677888764 3345778998776 5876431 1 1122233 67888888878889999998654 466
Q ss_pred EcccccccccceeEEE-ECCEEEEEeeCCceEEEEEcCCCCCcceEec
Q 016368 324 EVIELAELKGAEKITA-ARGRVCAVCENGERIMVVDVLASPARAWLVD 370 (390)
Q Consensus 324 ~i~~~p~~r~~~~~~~-~~g~l~i~g~~~~~v~~~d~~~~~~~~W~~~ 370 (390)
.-...+.... .+.+. .++.||+ |..+..++.+|..+... .|...
T Consensus 75 ~~~~~~~~~~-~sp~~~~~~~v~~-g~~dg~v~a~D~~tG~~-~w~~~ 119 (369)
T 2hz6_A 75 LPFTIPELVQ-ASPCRSSDGILYM-GKKQDIWYVIDLLTGEK-QQTLS 119 (369)
T ss_dssp CSCCHHHHHT-TCSCC-----CCC-CEEEEEEEEECCC----------
T ss_pred eeccCccccc-cCceEecCCEEEE-EeCCCEEEEEECCCCcE-EEEec
Confidence 4322221111 11122 3455543 34455788888776532 47643
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=88.25 E-value=12 Score=32.27 Aligned_cols=150 Identities=4% Similarity=-0.017 Sum_probs=81.1
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE-CCEEEEEcccCCCCceeEEEeC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDGAIYNV 273 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~~~yd~ 273 (390)
++.||++.... ..+..+|+.... ++.++--.... .-+++.. ++.+++. ..+.....+|+.
T Consensus 38 ~~~L~aV~d~~--------~~I~~ld~~g~v----~~~i~l~g~~D----~EGIa~~~~g~~~vs---~E~~~~l~~~~v 98 (255)
T 3qqz_A 38 SNTLFSTINKP--------AAIVEMTTNGDL----IRTIPLDFVKD----LETIEYIGDNQFVIS---DERDYAIYVISL 98 (255)
T ss_dssp TTEEEEEEETT--------EEEEEEETTCCE----EEEEECSSCSS----EEEEEECSTTEEEEE---ETTTTEEEEEEE
T ss_pred CCEEEEEECCC--------CeEEEEeCCCCE----EEEEecCCCCC----hHHeEEeCCCEEEEE---ECCCCcEEEEEc
Confidence 47899986553 378899998665 77764322111 1334433 4555555 223345667766
Q ss_pred CCCC--eE--ecCCC---CCCCCCCceEEE-eeCCeEEEEeCCCC-cEEEEEC--CCCceEEccc--c---cccccceeE
Q 016368 274 ELDK--WK--EMPEG---MHAGWNGPAAST-MNEEELYVVNEGKG-RLSKYDA--DHDWWDEVIE--L---AELKGAEKI 337 (390)
Q Consensus 274 ~~~~--W~--~~~~~---~~~~~~~~~~~~-~~~g~lyv~gg~~~-~v~~yd~--~~~~W~~i~~--~---p~~r~~~~~ 337 (390)
..+. |. ..... .+.....-+++. ..+++||+....+. .++.|+- .+..-+.+.. + ...+...++
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 5443 42 12110 112222345554 23458999876555 8888882 2221222110 0 012233445
Q ss_pred EEE--CCEEEEEeeCCceEEEEEcCCCC
Q 016368 338 TAA--RGRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 338 ~~~--~g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
+.. .|++||++.....++.+|.....
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~g~~ 206 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLVGEV 206 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTTCCE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCCCCE
Confidence 544 78899997777788899877653
No 271
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=88.20 E-value=28 Score=36.50 Aligned_cols=133 Identities=15% Similarity=0.001 Sum_probs=71.5
Q ss_pred eEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeE-EEeCCCCCeEecCCCCCCCCCCce
Q 016368 215 SMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGA-IYNVELDKWKEMPEGMHAGWNGPA 293 (390)
Q Consensus 215 ~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~-~yd~~~~~W~~~~~~~~~~~~~~~ 293 (390)
.+++++..+.. -..+...+.... ...... +|+.++++. .....+ +||..+.+-..+.. .......
T Consensus 318 ~i~~~~~~~~~----~~~~~~~~~~~~---~~~~~s-dg~~l~~~s---~~~~l~~~~d~~~~~~~~l~~---~~~~~~~ 383 (1045)
T 1k32_A 318 QAFIQDVSGTY----VLKVPEPLRIRY---VRRGGD-TKVAFIHGT---REGDFLGIYDYRTGKAEKFEE---NLGNVFA 383 (1045)
T ss_dssp EEEEECTTSSB----EEECSCCSCEEE---EEECSS-SEEEEEEEE---TTEEEEEEEETTTCCEEECCC---CCCSEEE
T ss_pred EEEEEcCCCCc----eEEccCCCcceE---EeeeEc-CCCeEEEEE---CCCceEEEEECCCCCceEecC---Cccceee
Confidence 67788877766 444432221011 111112 555433321 234566 78988876655542 1111223
Q ss_pred EEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeC-C---------ceEEEEEcCCC
Q 016368 294 ASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCEN-G---------ERIMVVDVLAS 362 (390)
Q Consensus 294 ~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~-~---------~~v~~~d~~~~ 362 (390)
++...+|+.++++..++.++.||.++.+-..+..-.. .....+... +|+..+++.. + ..++++|+.+.
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~-~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE-AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC-CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 3333688888888878899999999887665542111 111233333 5664444332 2 48999998764
No 272
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=87.59 E-value=24 Score=35.08 Aligned_cols=194 Identities=10% Similarity=-0.033 Sum_probs=93.2
Q ss_pred CCCcEEEeCCCCceecCCCCC---CCC-cceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccC
Q 016368 163 LASPLAFNPQSNTWFFGPQLS---IPR-RWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQL 236 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~~~---~~r-~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~ 236 (390)
...+++.+...+.++.+-... ... .......+ +|+..+++.... +.....++++|..++. .......
T Consensus 97 ~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~---G~~~~~i~v~d~~tg~----~~~~~~~ 169 (710)
T 2xdw_A 97 QRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS---GSDWVTIKFMKVDGAK----ELPDVLE 169 (710)
T ss_dssp SCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET---TCSCEEEEEEETTTTE----EEEEEEE
T ss_pred EEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC---CCceEEEEEEECCCCC----CCccccc
Confidence 346677776666666442111 111 11122222 566555543322 2223489999999988 6543211
Q ss_pred CCCCccccceEEEEE-CCEEEEEcccCCC-------------CceeEEEeCCCCCeE--ecCCCCCCCCCCceEEEeeCC
Q 016368 237 KDGRFSREAVEAVGF-KGNLCMVNLKGNG-------------AKDGAIYNVELDKWK--EMPEGMHAGWNGPAASTMNEE 300 (390)
Q Consensus 237 ~~~~~~r~~~~~~~~-~g~lyv~gg~g~~-------------~~~~~~yd~~~~~W~--~~~~~~~~~~~~~~~~~~~~g 300 (390)
.. .. ...+.. +|+.++++..... ...+.++++.+.+-. .+-.....+..........+|
T Consensus 170 ~~-~~----~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg 244 (710)
T 2xdw_A 170 RV-KF----SCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG 244 (710)
T ss_dssp EE-CS----CCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS
T ss_pred Cc-cc----ceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC
Confidence 11 11 122222 5553333222111 123566788776532 121101111111223333566
Q ss_pred eEEEEeCC-----CCcEEEEECCC------C--ceEEcccccccccceeEEEECCEEEEEeeC---CceEEEEEcCCCCC
Q 016368 301 ELYVVNEG-----KGRLSKYDADH------D--WWDEVIELAELKGAEKITAARGRVCAVCEN---GERIMVVDVLASPA 364 (390)
Q Consensus 301 ~lyv~gg~-----~~~v~~yd~~~------~--~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~---~~~v~~~d~~~~~~ 364 (390)
+..++... ...++.+|..+ . .+..+..-.. .....+..-++.||+.+.. ...++++|+.+...
T Consensus 245 ~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 323 (710)
T 2xdw_A 245 RYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE 323 (710)
T ss_dssp CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred CEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 64444432 45899999875 3 5776653211 1112233347788888643 33799999987643
Q ss_pred cceEe
Q 016368 365 RAWLV 369 (390)
Q Consensus 365 ~~W~~ 369 (390)
+.|..
T Consensus 324 ~~~~~ 328 (710)
T 2xdw_A 324 SKWKV 328 (710)
T ss_dssp GGCEE
T ss_pred cccee
Confidence 45774
No 273
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=86.81 E-value=21 Score=33.64 Aligned_cols=115 Identities=14% Similarity=0.201 Sum_probs=60.4
Q ss_pred ECCEEEEEcccCCCCceeEEEeCCCCCeEe--cCCCCCC-CCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEccc
Q 016368 251 FKGNLCMVNLKGNGAKDGAIYNVELDKWKE--MPEGMHA-GWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIE 327 (390)
Q Consensus 251 ~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~--~~~~~~~-~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~ 327 (390)
.+|++|++ -+...+.+|...+.+.. +...++. +..--++.. .++++|++-| +.+|+|+... ..+.+..
T Consensus 268 ~~G~tYFF-----Kg~~yWR~~~~~~~~~p~~Is~~WpglP~~IDAAf~-~~~~~yfFkG--~~yw~f~~~~-g~~~~~G 338 (460)
T 1qhu_A 268 NHGATYVF-----SGSHYWRLDTNRDGWHSWPIAHQWPQGPSTVDAAFS-WEDKLYLIQD--TKVYVFLTKG-GYTLVNG 338 (460)
T ss_dssp TTCCEEEE-----ETTEEEECTTGGGCCCCEEGGGTCTTSCSSCSEEEE-ETTEEEEEET--TEEEEEECSB-SCEECTT
T ss_pred CCCeEEEE-----eCCEEEEEecCCCCcCccchhhhccCCCCCCcEEEE-ECCeEEEEeC--CEEEEEeCCC-CceecCC
Confidence 47899998 34445566654432211 1111211 111223333 6899999965 5789998653 1222221
Q ss_pred --------cccccc------ceeEEE-ECCEEEEEeeCCceEEEEEcCCCCCcceE--ecCCCCee
Q 016368 328 --------LAELKG------AEKITA-ARGRVCAVCENGERIMVVDVLASPARAWL--VDPPRGFQ 376 (390)
Q Consensus 328 --------~p~~r~------~~~~~~-~~g~l~i~g~~~~~v~~~d~~~~~~~~W~--~~~p~g~~ 376 (390)
+..+.. ..++.. ..+++|++ . ++..|.||....+...+. ...|...+
T Consensus 339 yPK~I~~~lGlp~~~~~~~IDAA~~~~~~~ktyfF-k-G~~ywryd~~~~Pr~i~~~~~gi~~~vd 402 (460)
T 1qhu_A 339 YPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIM-A-GRRLWWLDLKSGAQATWTELPWPHEKVD 402 (460)
T ss_dssp CCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEE-E-TTEEEEEEGGGGGGCCCEEECCSCSCCS
T ss_pred CCeEHHHhccCCCccccCcccEEEEeCCCCEEEEE-E-CCEEEEEECCCCccchhhhCCCCCCCcC
Confidence 111111 222222 36899999 3 358999999876544443 23455543
No 274
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=86.03 E-value=8 Score=36.92 Aligned_cols=150 Identities=14% Similarity=0.096 Sum_probs=84.2
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE--------ECC-EEEEEcccCC--
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG--------FKG-NLCMVNLKGN-- 263 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~--------~~g-~lyv~gg~g~-- 263 (390)
++.||++-.. ...+.+.|++++. -+.+.........+ ....++ .+| .||+..-.+.
T Consensus 151 ~~~Lyv~~~~--------~~~i~~ID~~~~~----v~~l~~~~~~~~~~-p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 151 KDHLYICYDG--------HKAIQLIDLKNRM----LSSPLNINTIPTNR-IRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp EEEEEEEEET--------EEEEEEEETTTTE----EEEEECCTTSSCSB-EEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCEEEEEECC--------CCeEEEEECCCCE----EEEEEccCccccCC-CcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 3679988533 2468999999988 77665543322211 133333 244 4888742210
Q ss_pred -CCceeEEEeCCC-CCeE------ecCCCCCCCCCCceEEE-eeCCeEEEEeCCCCcEEEEECC-------CCc-eEE--
Q 016368 264 -GAKDGAIYNVEL-DKWK------EMPEGMHAGWNGPAAST-MNEEELYVVNEGKGRLSKYDAD-------HDW-WDE-- 324 (390)
Q Consensus 264 -~~~~~~~yd~~~-~~W~------~~~~~~~~~~~~~~~~~-~~~g~lyv~gg~~~~v~~yd~~-------~~~-W~~-- 324 (390)
....+.+++... +.|. .++. . .....+++ ..++.||+.....+.+++||++ +.. |+.
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~---~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAA-Y---KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEE-E---SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred ccCceEEEEecCCCCceeecccceeecc-C---CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 123356777554 3553 2221 1 12234443 1268999999888899999997 443 543
Q ss_pred ---------cccccccccceeEEEE-CCE-EEEEeeCCceEEEEEcCC
Q 016368 325 ---------VIELAELKGAEKITAA-RGR-VCAVCENGERIMVVDVLA 361 (390)
Q Consensus 325 ---------i~~~p~~r~~~~~~~~-~g~-l~i~g~~~~~v~~~d~~~ 361 (390)
+..++.....+.++.. +|. |||.=.....|+.+|...
T Consensus 294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 2222222234456655 454 888755567888876543
No 275
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=85.97 E-value=14 Score=37.16 Aligned_cols=148 Identities=9% Similarity=-0.025 Sum_probs=79.2
Q ss_pred CCCcEEEeCCCC--c-eecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCC--CccccccEEcccCC
Q 016368 163 LASPLAFNPQSN--T-WFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKS--DREDWKWEKKAQLK 237 (390)
Q Consensus 163 ~~~~~~~dp~t~--~-W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t--~~~~~~W~~~~~~~ 237 (390)
.++++++|..+. + |+.+.......... ....++.||+....+. ....+.++|..+ .. |+.+-+-.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~-----~~~~l~~~d~~~~~~~----~~~l~~~~ 362 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGA-----PLKKIVRVDLSGSTPR----FDTVVPES 362 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTC-----TTCEEEEEECSSSSCE----EEEEECCC
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCC-----CCCEEEEEeCCCCccc----cEEEecCC
Confidence 467899998877 6 77664332222222 2234677887754432 345789999887 46 88775432
Q ss_pred CCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC-eEEEEeC-C--CCcEE
Q 016368 238 DGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE-ELYVVNE-G--KGRLS 313 (390)
Q Consensus 238 ~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g-~lyv~gg-~--~~~v~ 313 (390)
... .......++++++.... .+...+.++|+..+.-+.+.. +.......+....++ .|++... . .+.++
T Consensus 363 ~~~----l~~~~~~~~~lv~~~~~-dg~~~l~~~~~~g~~~~~l~~--~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~ 435 (741)
T 1yr2_A 363 KDN----LESVGIAGNRLFASYIH-DAKSQVLAFDLDGKPAGAVSL--PGIGSASGLSGRPGDRHAYLSFSSFTQPATVL 435 (741)
T ss_dssp SSE----EEEEEEEBTEEEEEEEE-TTEEEEEEEETTSCEEEECBC--SSSCEEEEEECCBTCSCEEEEEEETTEEEEEE
T ss_pred CCe----EEEEEEECCEEEEEEEE-CCEEEEEEEeCCCCceeeccC--CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEE
Confidence 211 12334457787776321 123445678875543343332 111111111111234 3544432 1 23899
Q ss_pred EEECCCCceEEccc
Q 016368 314 KYDADHDWWDEVIE 327 (390)
Q Consensus 314 ~yd~~~~~W~~i~~ 327 (390)
.||..+.+.+.+..
T Consensus 436 ~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 436 ALDPATAKTTPWEP 449 (741)
T ss_dssp EEETTTTEEEECSC
T ss_pred EEECCCCcEEEEec
Confidence 99999888766643
No 276
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=85.87 E-value=20 Score=32.54 Aligned_cols=64 Identities=8% Similarity=0.073 Sum_probs=34.9
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCceEEcccccc-----------cccceeEEE--ECCEEEEEeeC---------CceEE
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDWWDEVIELAE-----------LKGAEKITA--ARGRVCAVCEN---------GERIM 355 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~-----------~r~~~~~~~--~~g~l~i~g~~---------~~~v~ 355 (390)
.++.+|++. ..+.+++.|..+..-..+...+. +.....+.. -++++|+.... .+.|+
T Consensus 223 ~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 223 KSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred cCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 456666655 45678888886553222221110 111111222 25789997532 35799
Q ss_pred EEEcCCC
Q 016368 356 VVDVLAS 362 (390)
Q Consensus 356 ~~d~~~~ 362 (390)
++|..+.
T Consensus 302 VID~~t~ 308 (373)
T 2mad_H 302 SVTGLVG 308 (373)
T ss_pred EEECCCC
Confidence 9999875
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=85.51 E-value=20 Score=32.15 Aligned_cols=144 Identities=11% Similarity=0.010 Sum_probs=77.3
Q ss_pred CeEEEEECCCCccccccEEcccCCCC---Cccc-cceEEEE----ECCEEEEEccc-------C---CCCceeEEEeCC-
Q 016368 214 RSMKKWDLKSDREDWKWEKKAQLKDG---RFSR-EAVEAVG----FKGNLCMVNLK-------G---NGAKDGAIYNVE- 274 (390)
Q Consensus 214 ~~~~~yd~~t~~~~~~W~~~~~~~~~---~~~r-~~~~~~~----~~g~lyv~gg~-------g---~~~~~~~~yd~~- 274 (390)
..+.+||+..+. =.++ ..+.. .... ...+... -+++|+++.-. | .+...+.+||+.
T Consensus 35 g~V~~~~~~~~~----~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~ 109 (334)
T 2p9w_A 35 GRIEVYNPKTQS----HFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPL 109 (334)
T ss_dssp TEEEEECTTTCC----EEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSC
T ss_pred CEEEEEcCCCCe----EEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCc
Confidence 478889998665 3334 22210 0000 1133344 25788886311 0 013446789987
Q ss_pred --CC--CeEec-CCCCCC-------CCC-CceEEEeeCCeEEEEeCCC-CcEEEEECCCCc---eEEcccccc-ccccee
Q 016368 275 --LD--KWKEM-PEGMHA-------GWN-GPAASTMNEEELYVVNEGK-GRLSKYDADHDW---WDEVIELAE-LKGAEK 336 (390)
Q Consensus 275 --~~--~W~~~-~~~~~~-------~~~-~~~~~~~~~g~lyv~gg~~-~~v~~yd~~~~~---W~~i~~~p~-~r~~~~ 336 (390)
++ .|..- ...... ... ..-+++.-+|.+||.+... +.|+++++.... |-.-..... .....+
T Consensus 110 ~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nG 189 (334)
T 2p9w_A 110 SENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSG 189 (334)
T ss_dssp CTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSE
T ss_pred CCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcce
Confidence 33 45532 110000 111 2234434579999988877 899999998653 432221111 123446
Q ss_pred EEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 337 ITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 337 ~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++.. +|+++|+-..+..++.+|+.+.
T Consensus 190 Iv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 190 ITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred EEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 7777 5544444344789999998853
No 278
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=85.48 E-value=31 Score=34.27 Aligned_cols=150 Identities=9% Similarity=0.015 Sum_probs=79.7
Q ss_pred CCcEEEeCCCC--ceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCc
Q 016368 164 ASPLAFNPQSN--TWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRF 241 (390)
Q Consensus 164 ~~~~~~dp~t~--~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~ 241 (390)
++++++|..+. +++.+..-..... ......+++||+....+. ....+.++|..+... -.|+.+-+-.. .
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~-----~~~~l~~~d~~~~~~-~~~~~l~~~~~--~ 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA-----PNRRLVTVDAANPGP-AHWRDLIPERQ--Q 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC-----TTCEEEEEETTSCCG-GGCEEEECCCS--S
T ss_pred cEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC-----CCCEEEEEeCCCCCc-cccEEEecCCC--C
Confidence 68899998765 5666543222111 123345789998876532 345788999876420 12776543222 1
Q ss_pred cccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeC-CeEEEEeC---CCCcEEEEEC
Q 016368 242 SREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNE-EELYVVNE---GKGRLSKYDA 317 (390)
Q Consensus 242 ~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-g~lyv~gg---~~~~v~~yd~ 317 (390)
.......++.|++.. ...+...+.++|+..+..+.+.. +.......+....+ +.|++... ..+.++.||.
T Consensus 330 ---~~~~s~~g~~lv~~~-~~~g~~~l~~~d~~g~~~~~l~~--p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 330 ---VLTVHSGSGYLFAEY-MVDATARVEQFDYEGKRVREVAL--PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp ---CEEEEEETTEEEEEE-EETTEEEEEEECTTSCEEEEECC--SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred ---EEEEEEECCEEEEEE-EECCeeEEEEEECCCCeeEEeec--CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 123444556665542 11223456788888665555543 11111011110113 44554432 1258999999
Q ss_pred CCCceEEcccc
Q 016368 318 DHDWWDEVIEL 328 (390)
Q Consensus 318 ~~~~W~~i~~~ 328 (390)
.+.+.+.+...
T Consensus 404 ~~g~~~~l~~~ 414 (693)
T 3iuj_A 404 KSGAISLYRAS 414 (693)
T ss_dssp TTCCEEEEECC
T ss_pred CCCeEEEEEeC
Confidence 98887776543
No 279
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=85.32 E-value=30 Score=33.99 Aligned_cols=146 Identities=11% Similarity=0.060 Sum_probs=86.8
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEE--ECCEEEEEcccCCCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVG--FKGNLCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~--~~g~lyv~gg~g~~~~~~~~yd 272 (390)
+++||+.- .....+..+++.... .+.+........ .+.++ .++.||+. ..+...+++.+
T Consensus 360 ~~~ly~sD--------~~~~~I~r~~~~g~~----~~~v~~~~~~~p----~GlAvD~~~~~lY~t---D~~~~~I~v~~ 420 (619)
T 3s94_A 360 EGYIYWTD--------DEVRAIRRSFIDGSG----SQFVVTAQIAHP----DGIAVDWVARNLYWT---DTGTDRIEVTR 420 (619)
T ss_dssp TTEEEEEE--------TTTTEEEEEETTSCS----CEEEECSSCSCC----CEEEEETTTTEEEEE---ETTTTEEEEEE
T ss_pred CCeEEEEe--------CCCCeEEEEEcCCCc----cEEEEECCCCCc----CceEEecccCcEEEE---eCCCCcEEEEe
Confidence 68999873 234578889988766 666543222111 34554 47899998 33456788898
Q ss_pred CCCCCeEecCCCCCCCCCCc-eEEE-eeCCeEEEEeC-CCCcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEE
Q 016368 273 VELDKWKEMPEGMHAGWNGP-AAST-MNEEELYVVNE-GKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAV 347 (390)
Q Consensus 273 ~~~~~W~~~~~~~~~~~~~~-~~~~-~~~g~lyv~gg-~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~ 347 (390)
+....-+.+.. .....+ .+++ ..+|.||+..- ....|++.++....=..+..- ......++++- +++||+.
T Consensus 421 ~~G~~~~~l~~---~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~-~l~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 421 LNGTMRKILIS---EDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT-SLGWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp TTSCSCEEEEC---TTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS-SCSCEEEEEEETTTTEEEEE
T ss_pred CCCCeEEEEEE---CCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC-CCCCCeeeEEcccCCEEEEE
Confidence 87654333322 112223 3333 12599999874 346899998875433333211 12233455554 7889988
Q ss_pred eeCCceEEEEEcCCCC
Q 016368 348 CENGERIMVVDVLASP 363 (390)
Q Consensus 348 g~~~~~v~~~d~~~~~ 363 (390)
=...+.|..+|+....
T Consensus 497 D~~~~~I~~~~~dG~~ 512 (619)
T 3s94_A 497 DAKTDKIEVMNTDGTG 512 (619)
T ss_dssp ETTTTEEEEEESSSCC
T ss_pred ECCCCEEEEEecCCCc
Confidence 5455678888876553
No 280
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=85.13 E-value=24 Score=32.83 Aligned_cols=63 Identities=8% Similarity=0.193 Sum_probs=42.9
Q ss_pred CCeEEEEeC---------CCCcEEEEECCCCceEEcccccccccceeEEEE-CC--EEEEEeeCCceEEEEEcCCCC
Q 016368 299 EEELYVVNE---------GKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RG--RVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 299 ~g~lyv~gg---------~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g--~l~i~g~~~~~v~~~d~~~~~ 363 (390)
++++|+... ..+.+.++|..+ ++.+..++......++... +| ++|+.....+.|.++|+.+..
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T--~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAET--GERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTT--CCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCC--CeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 478998743 124799999876 4566666655555566655 44 466664467899999998763
No 281
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=84.92 E-value=19 Score=31.52 Aligned_cols=210 Identities=8% Similarity=-0.044 Sum_probs=97.9
Q ss_pred ceeEEEEeCCCCCceeCCCCCCCCCcccccccccccccCCCceEEee-cCeEEEEEeecCCCCCCCCCcEEEeCCCCcee
Q 016368 99 SMEFFCFDPISSTWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGV-RNNLVLIAATTPHFLPALASPLAFNPQSNTWF 177 (390)
Q Consensus 99 ~~~~~~~d~~~~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~ 177 (390)
...++.+|..+++-..+ .. . . ..... ++..+++...... .....++++|..+++.+
T Consensus 42 ~~~l~~~d~~~~~~~~l---~~--~-~---------------~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~g~~~ 98 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI---EN--A-T---------------MPRISPDGKKIAFMRANEE--KKVSEIWVADLETLSSK 98 (347)
T ss_dssp EEEEEEEETTTCCEEEE---ES--C-E---------------EEEECTTSSEEEEEEEETT--TTEEEEEEEETTTTEEE
T ss_pred cceEEEEeCCCCceEEc---cc--C-C---------------CeEECCCCCEEEEEEeccC--CCcceEEEEECCCCceE
Confidence 34588888888766555 11 0 0 22223 3444444333221 12346899999888766
Q ss_pred cCCCCCCCCcceEEEEE-CCE-EEEEeccCCCC-------------C-----CCccCeEEEEECCCCcccccc-EEcccC
Q 016368 178 FGPQLSIPRRWCAMGSV-GGV-VYVASGVGAHY-------------R-----GDVARSMKKWDLKSDREDWKW-EKKAQL 236 (390)
Q Consensus 178 ~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~-------------~-----~~~~~~~~~yd~~t~~~~~~W-~~~~~~ 236 (390)
.+...+. ....... +++ |++........ . ......++++|..++. . +.+..
T Consensus 99 ~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~----~~~~l~~- 170 (347)
T 2gop_A 99 KILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE----VIEEFEK- 170 (347)
T ss_dssp EEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE----EEEEEEE-
T ss_pred EEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe----EEeeecC-
Confidence 6543322 1222222 554 44443210000 0 0113578999998887 6 55544
Q ss_pred CCCCccccceEEEE-ECCEEEEEcccCCC------CceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe-EEEEeCC
Q 016368 237 KDGRFSREAVEAVG-FKGNLCMVNLKGNG------AKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE-LYVVNEG 308 (390)
Q Consensus 237 ~~~~~~r~~~~~~~-~~g~lyv~gg~g~~------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~-lyv~gg~ 308 (390)
+ . . ...+. -+| +++.+..... ...+..+| +++++.+... ...... . .+|+ |++.+..
T Consensus 171 ~-~-~----~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~-s-pdg~~l~~~~~~ 235 (347)
T 2gop_A 171 P-R-F----SSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAV-D-SDGERILLYGKP 235 (347)
T ss_dssp E-T-T----CEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEE-E-ECSSCEEEEECC
T ss_pred C-C-c----ccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----cceeeE-C-CCCCEEEEEEcc
Confidence 2 1 1 22333 355 5554322111 22455667 6666655441 111122 3 5665 4444422
Q ss_pred -------CCcEEEEECCCCceEEccccccccccee-EEEECCEEEEEeeCCceEEE-EE
Q 016368 309 -------KGRLSKYDADHDWWDEVIELAELKGAEK-ITAARGRVCAVCENGERIMV-VD 358 (390)
Q Consensus 309 -------~~~v~~yd~~~~~W~~i~~~p~~r~~~~-~~~~~g~l~i~g~~~~~v~~-~d 358 (390)
...++.+| +.++..+..-.. ..... +...++ +++.+..+..+.+ ++
T Consensus 236 ~~~~~~~~~~l~~~d--~~~~~~l~~~~~-~~~~~~~~~sdg-~~~~~~~~~~~~l~~~ 290 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD--GKEVMGILDEVD-RGVGQAKIKDGK-VYFTLFEEGSVNLYIW 290 (347)
T ss_dssp SSSCCCSSCEEEEEC--SSCEEESSTTCC-SEEEEEEEETTE-EEEEEEETTEEEEEEE
T ss_pred ccCCccccceEEEEC--CCceEeccccCC-cccCCccEEcCc-EEEEEecCCcEEEEEc
Confidence 23799999 566666543211 11111 222244 6666544433333 55
No 282
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=84.03 E-value=2.1 Score=38.82 Aligned_cols=70 Identities=11% Similarity=0.191 Sum_probs=42.4
Q ss_pred eCCeEEEEe-CCCCcEEEEECCCCceEEcccccccccc------eeEEE-------ECCEEEEEeeCCceEEEEEcCCCC
Q 016368 298 NEEELYVVN-EGKGRLSKYDADHDWWDEVIELAELKGA------EKITA-------ARGRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 298 ~~g~lyv~g-g~~~~v~~yd~~~~~W~~i~~~p~~r~~------~~~~~-------~~g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
.++.+|++. ..+|.++.||.++..|+.-..++..... ...++ .+|.||+ |..+..++.+|..+..
T Consensus 54 ~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~-Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 54 ETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYT-GSMRTIMYTINMLNGE 132 (339)
T ss_dssp TSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEE-CEEEEEEEEEETTTCC
T ss_pred cCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEE-EecCCEEEEEECCCCc
Confidence 366777776 4688999999988776643344432211 11222 3444554 4666689999988764
Q ss_pred CcceEe
Q 016368 364 ARAWLV 369 (390)
Q Consensus 364 ~~~W~~ 369 (390)
. .|+.
T Consensus 133 ~-~W~~ 137 (339)
T 2be1_A 133 I-ISAF 137 (339)
T ss_dssp E-EEEE
T ss_pred E-EEEE
Confidence 2 5774
No 283
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=83.64 E-value=42 Score=35.73 Aligned_cols=136 Identities=12% Similarity=0.022 Sum_probs=83.7
Q ss_pred ccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCC
Q 016368 212 VARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNG 291 (390)
Q Consensus 212 ~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~ 291 (390)
..-.+.+|+...++ .+.+......-. ..+.+.++|++.+- -+....+||...++--.... ...+...
T Consensus 862 ~~Gri~vf~v~~~k----L~lv~~~~v~g~---v~al~~~~g~Lla~-----ig~~l~vy~l~~~~~L~~~~-~~~~~i~ 928 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGK----LQTVAEKEVKGA---VYSMVEFNGKLLAS-----INSTVRLYEWTTEKELRTEC-NHYNNIM 928 (1158)
T ss_dssp CCEEEEEEEEETTE----EEEEEEEEESSC---EEEEEEETTEEEEE-----ETTEEEEEEECTTSCEEEEE-EECCCSC
T ss_pred CceEEEEEEEECCE----EEEEEEEEcCCc---CEEEeeeCCEEEEE-----cCCEEEEEECCCCceEEEEe-eccccEE
Confidence 34568888887666 777765443322 36777899987665 45678899987664222111 0011111
Q ss_pred c-eEEEeeCCeEEEEeCCCC-cEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEEEEEcCC
Q 016368 292 P-AASTMNEEELYVVNEGKG-RLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 292 ~-~~~~~~~g~lyv~gg~~~-~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~ 361 (390)
. .+.+ .++.|++-.-..+ .+..|++..++-..++.-..+++..++..+++.-++.+....+++++....
T Consensus 929 ~~~l~~-~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 929 ALYLKT-KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEE-ETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred EEEEec-cCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 1 2223 6777766665555 778899999999998877777877777666544445445555676665433
No 284
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=83.25 E-value=22 Score=32.38 Aligned_cols=62 Identities=13% Similarity=0.108 Sum_probs=42.7
Q ss_pred CCeEEEEeC---C-----CCcEEEEECCCCceEEcccccccccceeEEEE-CCE-EEEEee-CCceEEEEEcCCC
Q 016368 299 EEELYVVNE---G-----KGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGR-VCAVCE-NGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg---~-----~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~-l~i~g~-~~~~v~~~d~~~~ 362 (390)
++++|+... . .+.+.++|..+. +.+..++.....+++... +|+ +|+... ..+.|.++|+.+.
T Consensus 275 g~~lyV~~~~~~~~~~~~~~~~~ViD~~t~--~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAAENTSSVTASVG--QTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp TTEEEEEEEECSSCTTSCEEEEEEEESSSC--CEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred CCEEEEEeccccCcccccCCCEEEEECCCC--eEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 467887533 1 235669998875 456666655556666665 554 888767 5789999999876
No 285
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=81.52 E-value=20 Score=29.27 Aligned_cols=63 Identities=6% Similarity=0.065 Sum_probs=38.0
Q ss_pred ECCEEEEEcccCCCCceeEEEeCCCCCeEe-----cCCCC-CCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc
Q 016368 251 FKGNLCMVNLKGNGAKDGAIYNVELDKWKE-----MPEGM-HAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 251 ~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-----~~~~~-~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
.+|++|++ -+...+.||..+++=.. +...+ ..+....++.. .+|.+|++-| ...++||..+..
T Consensus 108 ~~g~~yfF-----kg~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~idaa~~-~~g~~Yffkg--~~y~~~~~~~~~ 176 (195)
T 1itv_A 108 GRGKMLLF-----SGRRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQ-FREKAYFCQD--RFYWRVSSRSEL 176 (195)
T ss_dssp STTEEEEE-----ETTEEEEEETTTTEECGGGCEEHHHHSTTSCSSCSEEEE-ETTEEEEEET--TEEEEEECCTTC
T ss_pred CCCeEEEE-----eCCEEEEEeCCcccccCCCccChhhcCCCCCCCCCEEEE-eCCeEEEEeC--CEEEEEECCccE
Confidence 47899999 45567889987643110 10001 11112233443 6899999976 478999987654
No 286
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=80.90 E-value=30 Score=30.70 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=67.9
Q ss_pred cEEcccCCCCCccccceEEEEE-CCEEEEEccc-CCCCceeEEEeCCCCCeEecCCCCCC---CCCC-ceEEEeeCCeEE
Q 016368 230 WEKKAQLKDGRFSREAVEAVGF-KGNLCMVNLK-GNGAKDGAIYNVELDKWKEMPEGMHA---GWNG-PAASTMNEEELY 303 (390)
Q Consensus 230 W~~~~~~~~~~~~r~~~~~~~~-~g~lyv~gg~-g~~~~~~~~yd~~~~~W~~~~~~~~~---~~~~-~~~~~~~~g~ly 303 (390)
++.+.... . . ...+++. +|++|+...+ +.+...+..++ +.+-...+..... .... ..+++.-+|+||
T Consensus 9 ~~~v~~~~-~-~---p~~va~~~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~ 81 (343)
T 2qe8_A 9 LEVVAELS-L-A---PGNITLTPDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVW 81 (343)
T ss_dssp CEEEEEES-S-C---EEEEEECTTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEE
T ss_pred eEEEEEcC-C-C---cceEEECCCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEE
Confidence 66665544 1 1 1444444 7899987321 11113456666 4443333221011 1112 233332358999
Q ss_pred EEeCC-----CCcEEEEECCCCceEEccccccc-----ccceeEEEE--CCEEEEEee---CCceEEEEEcCCC
Q 016368 304 VVNEG-----KGRLSKYDADHDWWDEVIELAEL-----KGAEKITAA--RGRVCAVCE---NGERIMVVDVLAS 362 (390)
Q Consensus 304 v~gg~-----~~~v~~yd~~~~~W~~i~~~p~~-----r~~~~~~~~--~g~l~i~g~---~~~~v~~~d~~~~ 362 (390)
++... ...+++||+++++-...-.++.. .....+++- ++.+||... ....+.++|+.+.
T Consensus 82 v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 82 MLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp EEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred EEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCC
Confidence 98743 46899999998874332223211 122455555 578998754 4568999998754
No 287
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=80.58 E-value=15 Score=32.86 Aligned_cols=68 Identities=16% Similarity=0.067 Sum_probs=38.7
Q ss_pred eEEEeeCCe-EEEEeCCCCcEEEEECC-CCceEEccccc--c-cccceeEEEE-CC-EEEEEeeCCceEEEEEcC
Q 016368 293 AASTMNEEE-LYVVNEGKGRLSKYDAD-HDWWDEVIELA--E-LKGAEKITAA-RG-RVCAVCENGERIMVVDVL 360 (390)
Q Consensus 293 ~~~~~~~g~-lyv~gg~~~~v~~yd~~-~~~W~~i~~~p--~-~r~~~~~~~~-~g-~l~i~g~~~~~v~~~d~~ 360 (390)
.++...+|+ ||+.....+.+.+||.. +.+...+..+. . ......++.. +| .||+.+..++.+.+|++.
T Consensus 149 ~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 149 GMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 333334665 66655445689999987 67665554332 1 2223334444 44 577775556677777654
No 288
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=79.49 E-value=29 Score=34.90 Aligned_cols=209 Identities=11% Similarity=0.081 Sum_probs=0.0
Q ss_pred CCceeCCCCCCCCCcccccccccccccCCCceEEeecCeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCCCCCCcce
Q 016368 110 STWNPLPAPPQNPPLRLLYRHPSFLSRKLPVQSLGVRNNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQLSIPRRWC 189 (390)
Q Consensus 110 ~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~ 189 (390)
.+|..+...|......... .........++.++. ..+++-.-.-.+|+.+...+......
T Consensus 512 ~tW~~~~~~p~~~~~~~~i------------~~~~~~~~~~~a~~~--------~~v~~S~D~G~tW~~~~~~~~~~~i~ 571 (737)
T 2cn3_A 512 RNWFQPPNEAPNSVGGGSV------------AVAADAKSVIWTPEN--------ASPAVTTDNGNSWKVCTNLGMGAVVA 571 (737)
T ss_dssp SSCBCCSCCCSCSSCCSEE------------EECTTSSCEEEECTT--------SCCEEESSTTSSCEECBTCCTTCEEE
T ss_pred CCCcccccCCccccCCceE------------EEEeCCCCEEEEeCC--------CeEEEECCCCCCCccCCCCCCCceEE
Q ss_pred EEEEECCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEE---CCEEEEEcccCCCCc
Q 016368 190 AMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGF---KGNLCMVNLKGNGAK 266 (390)
Q Consensus 190 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~---~g~lyv~gg~g~~~~ 266 (390)
....-++.+|+.+ .. .+++-.=.-.+ |+.+.....+.. ...+... ++.+|+.+ ...
T Consensus 572 ~~~~~~~~~~a~~--~g--------~v~~S~DgG~t----W~~~~~~~~p~~---~~~i~~~~~~~g~l~~~~----~~g 630 (737)
T 2cn3_A 572 SDRVNGKKFYAFY--NG--------KFYISTDGGLT----FTDTKAPQLPKS---VNKIKAVPGKEGHVWLAA----REG 630 (737)
T ss_dssp ECSSCTTCEEEEE--TT--------EEEEESSTTSB----CEECCCSSCCSC---CSEEEEETTEEEEEEEEC----BTT
T ss_pred EEecCCCEEEEec--CC--------EEEEECCCCcC----cccccCCCCCCc---cceEEEEeCCCCEEEEEe----CCC
Q ss_pred eeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCC----eEEEEe--CCCCcEEEEECCCCceEEcccccccccceeEEEE
Q 016368 267 DGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEE----ELYVVN--EGKGRLSKYDADHDWWDEVIELAELKGAEKITAA 340 (390)
Q Consensus 267 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g----~lyv~g--g~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~ 340 (390)
.+..-+-.-++|+.+.. ............ ..+ .||++| |....+++=+-...+|+++.............+.
T Consensus 631 ~l~~S~D~G~tW~~~~~-~~~~~~~~~~~~-~~~~~~~~l~~~g~~g~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~~i~ 708 (737)
T 2cn3_A 631 GLWRSTDGGYTFEKLSN-VDTAHVVGFGKA-APGQDYMAIYITGKIDNVLGFFRSDDAGKTWVRINDDEHGYGAVDTAIT 708 (737)
T ss_dssp CEEEESSTTSSCEECTT-CSEEEEEEEECC-CTTCSSCEEEEEEEETTEEEEEEESSTTSSCEECSBTTBCCSCCCSCEE
T ss_pred cEEEEeCCCcccEECcC-CCccceEEEeec-CCCCCCcEEEEEEecCCcceEEEeCCCCCCCEeccCCccccCcccceec
Q ss_pred -----CCEEEEEeeCCceEEEEEcCCC
Q 016368 341 -----RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 341 -----~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.++||+. ..+..++..|+...
T Consensus 709 ~d~~~~g~v~~~-t~g~g~~~~~~~g~ 734 (737)
T 2cn3_A 709 GDPRVYGRVYIA-TNGRGIVYGEPASD 734 (737)
T ss_dssp EETTEEEEEEEE-CBSSCEEEEEECC-
T ss_pred CCCCcCceEEEE-eCCCceEEEecCCC
No 289
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=79.03 E-value=28 Score=35.90 Aligned_cols=144 Identities=11% Similarity=-0.006 Sum_probs=75.0
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVE 274 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~ 274 (390)
++++.+.|+.+. .+.+||..+.. -.. ....... -.+++...|++.+.+ . ....+.++|+.
T Consensus 28 dg~~lAsgs~Dg--------~I~lw~~~~~~----~~~--~~~~~~~---V~~l~fspg~~L~S~-s--~D~~v~lWd~~ 87 (902)
T 2oaj_A 28 TQNLLAIATVTG--------EVHIYGQQQVE----VVI--KLEDRSA---IKEMRFVKGIYLVVI-N--AKDTVYVLSLY 87 (902)
T ss_dssp TTTEEEEEETTS--------EEEEECSTTCE----EEE--ECSSCCC---EEEEEEETTTEEEEE-E--TTCEEEEEETT
T ss_pred CCCEEEEEeCCC--------EEEEEeCCCcE----EEE--EcCCCCC---EEEEEEcCCCEEEEE-E--CcCeEEEEECC
Confidence 455666666553 67778776554 221 1111111 133444446633332 1 34567789988
Q ss_pred CCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEc---------cccccccc-ceeEEEEC--C
Q 016368 275 LDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEV---------IELAELKG-AEKITAAR--G 342 (390)
Q Consensus 275 ~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i---------~~~p~~r~-~~~~~~~~--g 342 (390)
+.+-...-. ......+++...++..++.|..++.+..||..+..-... ..+..... ..+++... +
T Consensus 88 ~~~~~~~~~---~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~ 164 (902)
T 2oaj_A 88 SQKVLTTVF---VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDI 164 (902)
T ss_dssp TCSEEEEEE---CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEE
T ss_pred CCcEEEEEc---CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCC
Confidence 765321111 111111222235788888888899999999987654211 11111111 12333332 3
Q ss_pred EEEEEeeCCceEEEEEcCCC
Q 016368 343 RVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 343 ~l~i~g~~~~~v~~~d~~~~ 362 (390)
.++++|..+..+ +||+.+.
T Consensus 165 ~~l~~g~~dg~v-lWd~~~~ 183 (902)
T 2oaj_A 165 GTVLISYEYVTL-TYSLVEN 183 (902)
T ss_dssp EEEEEECSSCEE-EEETTTT
T ss_pred CEEEEEeCCCcE-EEECCCC
Confidence 566776667778 9998764
No 290
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=78.97 E-value=53 Score=32.49 Aligned_cols=137 Identities=10% Similarity=0.078 Sum_probs=75.3
Q ss_pred cCeEEEEECCCC--ccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCC---CeEecCCCCCC
Q 016368 213 ARSMKKWDLKSD--REDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELD---KWKEMPEGMHA 287 (390)
Q Consensus 213 ~~~~~~yd~~t~--~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~---~W~~~~~~~~~ 287 (390)
.+.++++|..+. . |+.+..-..... ......++++|+..-.+.....+...|+.+. .|+.+.+....
T Consensus 258 ~~~i~~~d~~~~~~~----~~~l~~~~~~~~----~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 329 (693)
T 3iuj_A 258 GNRLYVKDLSQENAP----LLTVQGDLDADV----SLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ 329 (693)
T ss_dssp CCEEEEEETTSTTCC----CEEEECSSSSCE----EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred CcEEEEEECCCCCCc----eEEEeCCCCceE----EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC
Confidence 368899998765 5 777654332211 2233467889988633222345678888763 48876442222
Q ss_pred CCCCceEEEeeCCeEEEEeCCCC--cEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEeeC---CceEEEEEcC
Q 016368 288 GWNGPAASTMNEEELYVVNEGKG--RLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCEN---GERIMVVDVL 360 (390)
Q Consensus 288 ~~~~~~~~~~~~g~lyv~gg~~~--~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~---~~~v~~~d~~ 360 (390)
. ..... .++.|++....++ .++++|..+.....+. +|.......+..- ++.|++.... -..++.+|+.
T Consensus 330 --~-~~~s~-~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~ 404 (693)
T 3iuj_A 330 --V-LTVHS-GSGYLFAEYMVDATARVEQFDYEGKRVREVA-LPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPK 404 (693)
T ss_dssp --C-EEEEE-ETTEEEEEEEETTEEEEEEECTTSCEEEEEC-CSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred --E-EEEEE-ECCEEEEEEEECCeeEEEEEECCCCeeEEee-cCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECC
Confidence 1 13333 5667766654444 7899998865544443 3322111111111 3445554332 2478888887
Q ss_pred CC
Q 016368 361 AS 362 (390)
Q Consensus 361 ~~ 362 (390)
+.
T Consensus 405 ~g 406 (693)
T 3iuj_A 405 SG 406 (693)
T ss_dssp TC
T ss_pred CC
Confidence 65
No 291
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=78.71 E-value=42 Score=31.19 Aligned_cols=55 Identities=15% Similarity=0.020 Sum_probs=31.6
Q ss_pred CCcEEEeCCCCceecCCCCC-CCC-----cceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLS-IPR-----RWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDR 225 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~-~~r-----~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~ 225 (390)
+.+.++|+.+++-..--+++ ..| .-+.+++. +.++||..-. ..+.+.++|..+++
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-------~~~~VsVID~~t~k 211 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-------PAPAVGVVDLEGKT 211 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-------SSCEEEEEETTTTE
T ss_pred CEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-------CCCeEEEEECCCCe
Confidence 57999999998654311111 111 11223332 4578887421 23579999999876
No 292
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=78.01 E-value=40 Score=30.56 Aligned_cols=27 Identities=4% Similarity=0.024 Sum_probs=22.3
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCceEE
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDWWDE 324 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~W~~ 324 (390)
.++..++.|+.++.+..||..+.+-..
T Consensus 352 ~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 352 GSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp TTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred CCCCEEEEeccCCEEEEEEcCCCccee
Confidence 677888889999999999998876544
No 293
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=76.96 E-value=50 Score=31.07 Aligned_cols=135 Identities=12% Similarity=0.159 Sum_probs=76.0
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEc--ccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEe
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKK--AQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYN 272 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~--~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd 272 (390)
++++|+|.|. ..+.||..++. .... +.++. .-++...+|++|++ -+.....||
T Consensus 158 ~~~~yfFkG~----------~yw~yd~~~~~----~~~~~w~gi~~------iDAA~~~~g~~YfF-----kG~~y~rfd 212 (460)
T 1qhu_A 158 DEGILFFQGN----------RKWFWDLTTGT----KKERSWPAVGN------CTSALRWLGRYYCF-----QGNQFLRFN 212 (460)
T ss_dssp SSEEEEEETT----------EEEEEETTTTE----EEEECCTTSCC------CSEEEEETTEEEEE-----ETTEEEEEC
T ss_pred CCeEEEEecc----------cEEEEecccce----eecccCCCCCc------cchheeeCCceEEE-----ECCEEEEEc
Confidence 6788888653 56889887765 3321 11221 13455578999999 456677888
Q ss_pred CCCCC------------eEecCCCCCC------------------CCCCceEEEe-eCCeEEEEeCCCCcEEEEECCCCc
Q 016368 273 VELDK------------WKEMPEGMHA------------------GWNGPAASTM-NEEELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 273 ~~~~~------------W~~~~~~~~~------------------~~~~~~~~~~-~~g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
..+.+ |-.++. ... +....-+++. .+|++|++-| +..|++|...+.
T Consensus 213 ~~~~~v~~gyPk~is~~w~~c~~-~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg--~~yWR~~~~~~~ 289 (460)
T 1qhu_A 213 PVSGEVPPGYPLDVRDYFLSCPG-RGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG--SHYWRLDTNRDG 289 (460)
T ss_dssp TTTCCCCTTCCEEHHHHTSCCTT-CCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET--TEEEECTTGGGC
T ss_pred CccCcccCCCCcchhhcccCCCC-CCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC--CEEEEEecCCCC
Confidence 76542 222111 000 0111223332 5799999976 578888876543
Q ss_pred eEE--cc----cccccccceeEEEECCEEEEEeeCCceEEEEEcCC
Q 016368 322 WDE--VI----ELAELKGAEKITAARGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 322 W~~--i~----~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~ 361 (390)
+.. |. .+|.. --++...++++|++ . ++.+|+|+..+
T Consensus 290 ~~p~~Is~~WpglP~~--IDAAf~~~~~~yfF-k-G~~yw~f~~~~ 331 (460)
T 1qhu_A 290 WHSWPIAHQWPQGPST--VDAAFSWEDKLYLI-Q-DTKVYVFLTKG 331 (460)
T ss_dssp CCCEEGGGTCTTSCSS--CSEEEEETTEEEEE-E-TTEEEEEECSB
T ss_pred cCccchhhhccCCCCC--CcEEEEECCeEEEE-e-CCEEEEEeCCC
Confidence 321 21 22221 22333457899999 4 34788888653
No 294
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=76.93 E-value=20 Score=30.09 Aligned_cols=61 Identities=10% Similarity=0.045 Sum_probs=37.4
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEecC----CCCCC------CCCCceEEE-eeCCeEEEEeCCCCcEEEEECCC
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKEMP----EGMHA------GWNGPAAST-MNEEELYVVNEGKGRLSKYDADH 319 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~----~~~~~------~~~~~~~~~-~~~g~lyv~gg~~~~v~~yd~~~ 319 (390)
++++|++ -+...++||..+++-..-+ ..++. +..--++.. ..+|++|++-| ...|+||..+
T Consensus 127 ~gk~yfF-----kG~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--~~ywr~d~~~ 198 (225)
T 3oyo_A 127 GKEVYLF-----KGNKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--QNYVRIDFTP 198 (225)
T ss_dssp TTEEEEE-----ETTEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--TEEEEEECCT
T ss_pred CCcEEEE-----eCCeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--CEEEEEeCCc
Confidence 7899999 4566788987665443211 11221 222223332 13799999976 5789999983
No 295
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=76.12 E-value=21 Score=34.77 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=47.8
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCc--eEEcccccccc------cceeEEEECCEEEEEeeCCceEEEEEcCCCCCcceEe
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDW--WDEVIELAELK------GAEKITAARGRVCAVCENGERIMVVDVLASPARAWLV 369 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~--W~~i~~~p~~r------~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~~~~~W~~ 369 (390)
.+|.||+....++ ++.+|.++.+ |+.-...+... ...+.++.+++||+. ..+..++.+|..+... .|+.
T Consensus 67 ~~g~vyv~~~~~~-v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~-t~dg~l~AlD~~TG~~-~W~~ 143 (582)
T 1flg_A 67 SDGVIYVTASYSR-LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFG-TLDASVVALNKNTGKV-VWKK 143 (582)
T ss_dssp ETTEEEEEETTTE-EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEE-ETTTEEEEEESSSCCE-EEEE
T ss_pred ECCEEEEEcCCCC-EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEE-eCCCEEEEEECCCCCE-Eeee
Confidence 7999999876444 9999987754 87754332210 123455678999886 5566899999987642 5885
Q ss_pred cC
Q 016368 370 DP 371 (390)
Q Consensus 370 ~~ 371 (390)
..
T Consensus 144 ~~ 145 (582)
T 1flg_A 144 KF 145 (582)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 296
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=71.22 E-value=55 Score=28.97 Aligned_cols=114 Identities=13% Similarity=0.092 Sum_probs=61.2
Q ss_pred CCEEEEEcccCCCCce-eEEEeCCCCCeEe-cCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCC---ceEEcc
Q 016368 252 KGNLCMVNLKGNGAKD-GAIYNVELDKWKE-MPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHD---WWDEVI 326 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~-~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~---~W~~i~ 326 (390)
+|++.+.|+ .... +.+||..+.+-.. +.... ......+++...+|++++.++.++.+..||.... .+..+.
T Consensus 206 ~g~~l~s~s---~d~~~v~iwd~~~~~~~~~~~~g~-h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~ 281 (355)
T 3vu4_A 206 KSDMVATCS---QDGTIIRVFKTEDGVLVREFRRGL-DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALK 281 (355)
T ss_dssp TSSEEEEEE---TTCSEEEEEETTTCCEEEEEECTT-CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETT
T ss_pred CCCEEEEEe---CCCCEEEEEECCCCcEEEEEEcCC-CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccccccc
Confidence 666666642 2234 7789988764322 21100 1111223332357888899998999999998654 233332
Q ss_pred c-----------------cccc-cc-ceeEEEE-CCEEEEEeeCCceEEEEEcCCCC-CcceEe
Q 016368 327 E-----------------LAEL-KG-AEKITAA-RGRVCAVCENGERIMVVDVLASP-ARAWLV 369 (390)
Q Consensus 327 ~-----------------~p~~-r~-~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~~-~~~W~~ 369 (390)
. ++.. .. ...++.. +|+..++|..+..+.+|++.... .+.|.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~~~~~~ 345 (355)
T 3vu4_A 282 GWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEMERWLI 345 (355)
T ss_dssp TTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTTTEEEE
T ss_pred ceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCCceEEE
Confidence 2 0100 00 0222222 67777777767788888776532 344554
No 297
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=71.04 E-value=63 Score=29.56 Aligned_cols=55 Identities=16% Similarity=0.027 Sum_probs=31.9
Q ss_pred CCcEEEeCCCCceecCCCCCC-CC-----cceEEEEE--CCEEEEEeccCCCCCCCccCeEEEEECCCCc
Q 016368 164 ASPLAFNPQSNTWFFGPQLSI-PR-----RWCAMGSV--GGVVYVASGVGAHYRGDVARSMKKWDLKSDR 225 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~-~r-----~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~ 225 (390)
+.+.++|+.|++-..--+.+. .| .-+..++. +..+||.... ..+.+.+.|..+++
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~-------~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS-------PAPAVGVVDLEGKA 171 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-------SSCEEEEEETTTTE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC-------CCCeEEEEECCCCc
Confidence 568999999987543111111 11 22233333 4568886432 23488999999876
No 298
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=70.19 E-value=83 Score=30.62 Aligned_cols=190 Identities=8% Similarity=-0.027 Sum_probs=101.2
Q ss_pred CCCCcEEEeCCCCceecCCCCCCCCcceEEEEE----CCEEEEEeccCC---------CCCCCccCeEEEEECCCCcccc
Q 016368 162 ALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV----GGVVYVASGVGA---------HYRGDVARSMKKWDLKSDREDW 228 (390)
Q Consensus 162 ~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~---------~~~~~~~~~~~~yd~~t~~~~~ 228 (390)
..+.+.+.|+.+.+-..+-.+|....-|+++.. .+++|+.+.+.. .......+.+-+.|..+.+ .
T Consensus 110 ~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~--v 187 (595)
T 1fwx_A 110 ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWE--V 187 (595)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTE--E
T ss_pred CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCe--E
Confidence 346799999999876554456655556666652 467887764311 0012344578889998865 2
Q ss_pred ccEEcc-cCCCCCccccceEEEEECC-EEEEEccc--------------------------------CCC--CceeEEEe
Q 016368 229 KWEKKA-QLKDGRFSREAVEAVGFKG-NLCMVNLK--------------------------------GNG--AKDGAIYN 272 (390)
Q Consensus 229 ~W~~~~-~~~~~~~~r~~~~~~~~~g-~lyv~gg~--------------------------------g~~--~~~~~~yd 272 (390)
.|+..- .-|. ...+..+| .+|+..-. |.. ...+.+.|
T Consensus 188 ~~qI~Vgg~pd-------~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID 260 (595)
T 1fwx_A 188 AWQVLVSGNLD-------NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVD 260 (595)
T ss_dssp EEEEEESSCCC-------CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEE
T ss_pred EEEEEeCCCcc-------ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEe
Confidence 365332 1111 11222222 23332100 000 01245788
Q ss_pred CCCCCeEe-cCCCCCCCCCCceEEEeeCCe-EEEEeCCCCcEEEEECCCCc-e---------EEcccccccccceeEEE-
Q 016368 273 VELDKWKE-MPEGMHAGWNGPAASTMNEEE-LYVVNEGKGRLSKYDADHDW-W---------DEVIELAELKGAEKITA- 339 (390)
Q Consensus 273 ~~~~~W~~-~~~~~~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd~~~~~-W---------~~i~~~p~~r~~~~~~~- 339 (390)
..+.+.+. +.. .+.+..-+++.+..+|+ +|+-+..++.+.+||.++.. + ..+.+++.......++.
T Consensus 261 ~~~~~~~~~~~~-Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~ 339 (595)
T 1fwx_A 261 GRKEASSLFTRY-IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFD 339 (595)
T ss_dssp CSGGGCCSSEEE-EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEEC
T ss_pred CcccCCceeEEE-EecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEEC
Confidence 88733222 112 33343444555436665 66666677799999998542 1 12223333233333333
Q ss_pred ECCEEEEEeeCCceEEEEEcCC
Q 016368 340 ARGRVCAVCENGERIMVVDVLA 361 (390)
Q Consensus 340 ~~g~l~i~g~~~~~v~~~d~~~ 361 (390)
-+|.+|+.-.-.++|.+||+.+
T Consensus 340 ~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 340 GRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCeEEEEEecCCcEEEEEhhH
Confidence 3568888766677888888765
No 299
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=69.11 E-value=95 Score=30.86 Aligned_cols=186 Identities=11% Similarity=0.058 Sum_probs=91.9
Q ss_pred CCCcEEEeCCCCcee--cCCCCC-CCCcceEEEEE-CCE-EEEEeccCCCCCCCccCeEEEEECCCCccccc-cEEcccC
Q 016368 163 LASPLAFNPQSNTWF--FGPQLS-IPRRWCAMGSV-GGV-VYVASGVGAHYRGDVARSMKKWDLKSDREDWK-WEKKAQL 236 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~--~~~~~~-~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~-W~~~~~~ 236 (390)
...+++++..+.+-. .+-..+ .+......... +|+ |++..... ......++++|..+.. .. |+.+..-
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~----~~~~~~l~~~d~~~~~--~~~~~~l~~~ 315 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEG----TDPVNTVHVARVTNGK--IGPVTALIPD 315 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECT----TCSCCEEEEEEEETTE--ECCCEEEECS
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEcc----CCCcceEEEEECCCCC--CcccEEecCC
Confidence 346888888766421 111111 11112222222 554 44444322 1135688999987651 01 5555432
Q ss_pred CCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCC--CCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCC--cE
Q 016368 237 KDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVEL--DKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKG--RL 312 (390)
Q Consensus 237 ~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~--~v 312 (390)
..... ....-.++.+|+..-.+.....+.++|..+ ..|+.+-+.. .. .-..+.. .++.|++....++ .+
T Consensus 316 ~~~~~----~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~-~l~~~~~-~~~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 316 LKAQW----DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES-KD-NLESVGI-AGNRLFASYIHDAKSQV 388 (741)
T ss_dssp SSSCE----EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC-SS-EEEEEEE-EBTEEEEEEEETTEEEE
T ss_pred CCceE----EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC-CC-eEEEEEE-ECCEEEEEEEECCEEEE
Confidence 22211 223345667887752222234577889887 5788765422 11 1122333 5888888876555 78
Q ss_pred EEEECCCCceEEcccccccccceeEEEE-C-CEEEEEeeC---CceEEEEEcCCC
Q 016368 313 SKYDADHDWWDEVIELAELKGAEKITAA-R-GRVCAVCEN---GERIMVVDVLAS 362 (390)
Q Consensus 313 ~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~-g~l~i~g~~---~~~v~~~d~~~~ 362 (390)
+.+|.....-..+. +|.......+... + +.|++.... ...++.+|+.+.
T Consensus 389 ~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 389 LAFDLDGKPAGAVS-LPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEETTSCEEEECB-CSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EEEeCCCCceeecc-CCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 88887654333332 2221111222221 3 345544322 247889998764
No 300
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=67.68 E-value=35 Score=28.62 Aligned_cols=62 Identities=10% Similarity=0.141 Sum_probs=36.8
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEe-----cCCCCCC------CCCCceEEE-eeCCeEEEEeCCCCcEEEEECCC
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKE-----MPEGMHA------GWNGPAAST-MNEEELYVVNEGKGRLSKYDADH 319 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-----~~~~~~~------~~~~~~~~~-~~~g~lyv~gg~~~~v~~yd~~~ 319 (390)
++++|++ -+...++||..+++=.. +...+|. +..--++.. ..+|++|++-| ...|+||..+
T Consensus 129 ~~k~yfF-----kG~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--~~Ywr~d~~~ 201 (227)
T 3lp9_A 129 GKEVYLF-----KGDQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--DHYARVKVTP 201 (227)
T ss_dssp TTEEEEE-----ETTEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--TEEEEEECCS
T ss_pred CCEEEEE-----ECCEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--CEEEEEECCc
Confidence 6899999 45677899976543111 1111221 011222332 13689999976 5789999887
Q ss_pred C
Q 016368 320 D 320 (390)
Q Consensus 320 ~ 320 (390)
.
T Consensus 202 ~ 202 (227)
T 3lp9_A 202 X 202 (227)
T ss_dssp S
T ss_pred c
Confidence 5
No 301
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=67.49 E-value=71 Score=28.80 Aligned_cols=207 Identities=12% Similarity=0.078 Sum_probs=98.2
Q ss_pred eEEeecCeEEEEEeecC-----CC-CCCCCCcEEEeCCC--CceecCCCCC-----CCCcceEEEEE---CC--EEEEEe
Q 016368 141 QSLGVRNNLVLIAATTP-----HF-LPALASPLAFNPQS--NTWFFGPQLS-----IPRRWCAMGSV---GG--VVYVAS 202 (390)
Q Consensus 141 ~~~~~~~~l~~~gG~~~-----~~-~~~~~~~~~~dp~t--~~W~~~~~~~-----~~r~~~~~~~~---~~--~lyv~G 202 (390)
..+...+++++++.+.. .. ......+++||+.+ .+-+++.-.. ..-.-|++.+. ++ +|||+.
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvn 133 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN 133 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEE
Confidence 33344556777664210 00 01345799999983 3444443211 11233555543 24 577775
Q ss_pred ccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEccc--------------CCCCcee
Q 016368 203 GVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLK--------------GNGAKDG 268 (390)
Q Consensus 203 G~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~--------------g~~~~~~ 268 (390)
-... .....++.+|+.++. ...+......+..+..-.++.-+|.+|+-+.. +.....+
T Consensus 134 h~~~----~s~ielf~~d~~~~~----~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~v 205 (355)
T 3sre_A 134 HPGS----SSTVEVFKFQEEEKS----LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFV 205 (355)
T ss_dssp CSTT----CCEEEEEEEETTTTE----EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEE
T ss_pred CCCC----CCeEEEEEEECCCCE----EEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEE
Confidence 4321 122244455565555 55444433333322223345568898886311 0011234
Q ss_pred EEEeCCCCCeEecCCCCCCCCCCceEEEeeCC-eEEEEeCCCCcEEEEECCCC-ceEEcccccccccceeEEEE--CCEE
Q 016368 269 AIYNVELDKWKEMPEGMHAGWNGPAASTMNEE-ELYVVNEGKGRLSKYDADHD-WWDEVIELAELKGAEKITAA--RGRV 344 (390)
Q Consensus 269 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd~~~~-~W~~i~~~p~~r~~~~~~~~--~g~l 344 (390)
..||+. +.+.+...+.. .-+++...++ .||+.....+.+++||...+ +.............-++++- +|.|
T Consensus 206 yr~d~~--~~~~~~~~l~~---pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 206 TYYSPN--DVRVVAEGFDF---ANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDL 280 (355)
T ss_dssp EEECTT--CCEEEEEEESS---EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCE
T ss_pred EEEECC--eEEEeecCCcc---cCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcE
Confidence 466663 44443321211 1133332454 78888877789999997643 33322211111222345554 3889
Q ss_pred EEEee-CCceEEEEEcC
Q 016368 345 CAVCE-NGERIMVVDVL 360 (390)
Q Consensus 345 ~i~g~-~~~~v~~~d~~ 360 (390)
|+... ++..|..||+.
T Consensus 281 wva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 281 WVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEESCHHHHHSCCTT
T ss_pred EEEecCCceEEEEECCC
Confidence 98543 33344444443
No 302
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=66.24 E-value=25 Score=30.20 Aligned_cols=64 Identities=14% Similarity=0.161 Sum_probs=44.3
Q ss_pred CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CCEEEEEeeCCceEEEEEcCCCC
Q 016368 299 EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RGRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
++.||++...++.++++|.....+..++ +.......+++.. ++.++|..+....++++++....
T Consensus 38 ~~~L~aV~d~~~~I~~ld~~g~v~~~i~-l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 38 SNTLFSTINKPAAIVEMTTNGDLIRTIP-LDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TTEEEEEEETTEEEEEEETTCCEEEEEE-CSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CCEEEEEECCCCeEEEEeCCCCEEEEEe-cCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 5789998887889999999977677764 2222445566666 45554554556688888887653
No 303
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=66.06 E-value=55 Score=26.96 Aligned_cols=62 Identities=13% Similarity=0.084 Sum_probs=37.8
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEe-----cCCCC-CCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCc
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKE-----MPEGM-HAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-----~~~~~-~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
+|++|++ -+...+.||..+++=.. +...+ ..+....++.. .+|++|++-| ...|+||..+.+
T Consensus 127 ~gk~yfF-----kG~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~iDaAf~-~~g~~YfFkg--~~y~rf~~~~~~ 194 (207)
T 1pex_A 127 TGKTLLF-----SGNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKVDAVYE-KNGYIYFFNG--PIQFEYSIWSNR 194 (207)
T ss_dssp TSEEEEE-----ETTEEEEEETTTTEECSSCCCBHHHHSTTSCSCCSEEEE-ETTEEEEEET--TEEEEEETTTTE
T ss_pred CCEEEEE-----eCCEEEEEeCcCccccCCCCccHHHcCCCCCCCccEEEE-cCCcEEEEEC--CEEEEEeCCccE
Confidence 5899999 45667899987543110 00001 11112233343 7999999975 578999988654
No 304
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=65.70 E-value=58 Score=27.11 Aligned_cols=115 Identities=11% Similarity=0.189 Sum_probs=60.2
Q ss_pred ECCEEEEEcccCCCCceeEEEeCCCCCe--EecCCCCC-CCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEE---
Q 016368 251 FKGNLCMVNLKGNGAKDGAIYNVELDKW--KEMPEGMH-AGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDE--- 324 (390)
Q Consensus 251 ~~g~lyv~gg~g~~~~~~~~yd~~~~~W--~~~~~~~~-~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~--- 324 (390)
.+|++|++ -+...+.++.....+ ..+...++ .+..--++.. .+|++|++-| ..+|+|+..++ .+.
T Consensus 27 ~~g~~yfF-----kg~~~Wr~~~~~~~~~p~~Is~~wpgLP~~IDAA~~-~~~~~yfFkG--~~yw~~~~~~~-~~~~~g 97 (219)
T 1hxn_A 27 NHGATYVF-----SGSHYWRLDTNRDGWHSWPIAHQWPQGPSTVDAAFS-WEDKLYLIQD--TKVYVFLTKGG-YTLVNG 97 (219)
T ss_dssp TTSCEEEE-----ETTEEEESSSSSCTTCCEEGGGTCTTSCSSCSEEEE-ETTEEEEEET--TEEEEEECSSS-CEECTT
T ss_pred CCCcEEEE-----eCCEEEEEcCCCCCCCceEhhhhccCCCCCccEEEE-ECCcEEEecC--CEEEEEeCCCC-ceecCC
Confidence 48899998 344455555433221 11111111 1112223343 6999999976 57999987531 112
Q ss_pred ----ccc---cccc---ccceeEEEE--CCEEEEEeeCCceEEEEEcCCCCCcceE--ecCCCCee
Q 016368 325 ----VIE---LAEL---KGAEKITAA--RGRVCAVCENGERIMVVDVLASPARAWL--VDPPRGFQ 376 (390)
Q Consensus 325 ----i~~---~p~~---r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~~~~~W~--~~~p~g~~ 376 (390)
|.. +|.. ..--++... ++++|++ .+ +..|.||..+.+...|. ...|....
T Consensus 98 yPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfF-kG-~~ywr~d~~~~P~~i~~~~~g~p~~vd 161 (219)
T 1hxn_A 98 YPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIM-AG-RRLWWLDLKSGAQATWTELPWPHEKVD 161 (219)
T ss_dssp CCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEE-ET-TEEEEEEGGGGGGCCCEEECCSCSCCS
T ss_pred CCeehhhccCCCCcccccccceeEEecCCCEEEEE-eC-CEEEEEeCCCCceEhhhcCCCCCCCcC
Confidence 211 2221 001222222 6899999 43 47899998776655664 12344443
No 305
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=65.58 E-value=1.1e+02 Score=30.48 Aligned_cols=95 Identities=14% Similarity=0.110 Sum_probs=53.9
Q ss_pred cCeEEEEECCCC--cccccc--EEcccCCCCCccccceEEE-EECCEEEEEcccC-CCCceeEEEeCCC-CCeEe-cCCC
Q 016368 213 ARSMKKWDLKSD--REDWKW--EKKAQLKDGRFSREAVEAV-GFKGNLCMVNLKG-NGAKDGAIYNVEL-DKWKE-MPEG 284 (390)
Q Consensus 213 ~~~~~~yd~~t~--~~~~~W--~~~~~~~~~~~~r~~~~~~-~~~g~lyv~gg~g-~~~~~~~~yd~~~-~~W~~-~~~~ 284 (390)
...++++|..+. . + +.+..-.... .++.. ..++.+|+..-.+ .+......+|..+ ..|+. +-..
T Consensus 294 ~~~l~~~d~~~~~~~----~~~~~l~~~~~~~----~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~ 365 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAH----NTLEIVRPREKGV----RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDH 365 (751)
T ss_dssp CEEEEEEESSSCTTC----CCEEESSCCCTTC----CEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECC
T ss_pred CceEEEEECCCCCCC----ceeEEeecCCCCc----eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECC
Confidence 457889999875 4 6 5554322211 13332 2377888885332 2334567888876 67876 4321
Q ss_pred CCCCCCCceEEEeeCCeEEEEeCCCC--cEEEEEC
Q 016368 285 MHAGWNGPAASTMNEEELYVVNEGKG--RLSKYDA 317 (390)
Q Consensus 285 ~~~~~~~~~~~~~~~g~lyv~gg~~~--~v~~yd~ 317 (390)
- .......+.. .++.|++....++ .++++|.
T Consensus 366 ~-~~~~l~~~~~-~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 366 S-EDVFMESIAV-RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp C-SSEEEEEEEE-CSSEEEEEEEETTEEEEEEEEC
T ss_pred C-CCcEEEEEEE-ECCEEEEEEEeCCEEEEEEEec
Confidence 1 1111123333 6778887776555 7888886
No 306
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=64.31 E-value=1.1e+02 Score=30.04 Aligned_cols=67 Identities=9% Similarity=-0.166 Sum_probs=34.6
Q ss_pred CcEEEeCCCCceecCCCCCCCC--cceEEEE-ECCEEEEEeccCCC-CCCCccCeEEEEECCCCccccccEEccc
Q 016368 165 SPLAFNPQSNTWFFGPQLSIPR--RWCAMGS-VGGVVYVASGVGAH-YRGDVARSMKKWDLKSDREDWKWEKKAQ 235 (390)
Q Consensus 165 ~~~~~dp~t~~W~~~~~~~~~r--~~~~~~~-~~~~lyv~GG~~~~-~~~~~~~~~~~yd~~t~~~~~~W~~~~~ 235 (390)
.++++|+.+++-..+-...... .-...+. -+|+..+++..... ........++++|..++. -+.+..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~l~~ 108 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD----PQSLDP 108 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC----CEECCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc----eEeccC
Confidence 6888898887654332211110 0112222 26665555543221 111234689999999887 555543
No 307
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=62.45 E-value=58 Score=31.67 Aligned_cols=107 Identities=9% Similarity=-0.031 Sum_probs=61.7
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCC-CCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCce-----EEc
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHA-GWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWW-----DEV 325 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~-~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W-----~~i 325 (390)
+|+....++ ....+.+||.++ .+..+...++. .+...+++...+|++.+.|+.++.+..||..++.- ..+
T Consensus 96 dG~~LAs~s---~dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l 171 (588)
T 2j04_A 96 IDDWMAVLS---NNGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFE 171 (588)
T ss_dssp SSSCEEEEE---TTSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEE
T ss_pred CCCEEEEEe---CCCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceee
Confidence 555444421 123355666433 34433321221 22334444457999999999999999999987632 122
Q ss_pred cccc----cc-ccceeEEEECCEEEEEeeCCceEEEEEcCCCC
Q 016368 326 IELA----EL-KGAEKITAARGRVCAVCENGERIMVVDVLASP 363 (390)
Q Consensus 326 ~~~p----~~-r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~~ 363 (390)
..+. .. .....++...+. ++.++.++.+.+||+.+..
T Consensus 172 ~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~ 213 (588)
T 2j04_A 172 SSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASS 213 (588)
T ss_dssp EEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSS
T ss_pred eeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc
Confidence 3321 11 123445555555 6676778899999998764
No 308
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=61.29 E-value=87 Score=27.67 Aligned_cols=65 Identities=0% Similarity=0.009 Sum_probs=33.9
Q ss_pred eCCe-EEEEeCCCC-----cEEEEECC-CCceEEccc-ccc-c--ccceeEEE---ECCEEEEEeeCCceEEEEEcCCC
Q 016368 298 NEEE-LYVVNEGKG-----RLSKYDAD-HDWWDEVIE-LAE-L--KGAEKITA---ARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 298 ~~g~-lyv~gg~~~-----~v~~yd~~-~~~W~~i~~-~p~-~--r~~~~~~~---~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+|+ ||+.....+ .+.+|+.. +.+...+.. .+. . .....+.- -+..||+.+...+.|.+|++...
T Consensus 264 pdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 264 FSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 5664 665543232 78888875 455554221 111 1 11222233 24566666555578888887654
No 309
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=60.74 E-value=73 Score=26.59 Aligned_cols=101 Identities=11% Similarity=0.100 Sum_probs=56.0
Q ss_pred ECCEEEEEcccCCCCceeEEEeCCCC----CeEecC----CC---CCCC--CCCceEEE--eeCCeEEEEeCCCCcEEEE
Q 016368 251 FKGNLCMVNLKGNGAKDGAIYNVELD----KWKEMP----EG---MHAG--WNGPAAST--MNEEELYVVNEGKGRLSKY 315 (390)
Q Consensus 251 ~~g~lyv~gg~g~~~~~~~~yd~~~~----~W~~~~----~~---~~~~--~~~~~~~~--~~~g~lyv~gg~~~~v~~y 315 (390)
.+|++|++ -+...++||..++ .-..-+ .. +|.. ....-++. ..++++|++-| ...|+|
T Consensus 69 ~~g~~~fF-----kg~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG--~~yw~~ 141 (225)
T 3oyo_A 69 EASEAYVF-----SGNHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG--NKYVRI 141 (225)
T ss_dssp STTEEEEE-----ETTEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET--TEEEEE
T ss_pred CCCeEEEE-----cCCEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC--CeEEEE
Confidence 58999999 4566778876432 111101 00 1110 00222332 24799999976 578999
Q ss_pred ECCCCceEE----cc-cccc------cccceeEEE--ECCEEEEEeeCCceEEEEEcC
Q 016368 316 DADHDWWDE----VI-ELAE------LKGAEKITA--ARGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 316 d~~~~~W~~----i~-~~p~------~r~~~~~~~--~~g~l~i~g~~~~~v~~~d~~ 360 (390)
|..+++-.. |. ..|. +...-++.. .++++|++ . +...|.||..
T Consensus 142 d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfF-k-G~~ywr~d~~ 197 (225)
T 3oyo_A 142 AYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLF-K-GQNYVRIDFT 197 (225)
T ss_dssp ETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEE-E-TTEEEEEECC
T ss_pred ECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEE-E-CCEEEEEeCC
Confidence 977665433 11 1221 111223333 37999999 4 3588999987
No 310
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=60.56 E-value=84 Score=27.21 Aligned_cols=164 Identities=11% Similarity=0.029 Sum_probs=82.0
Q ss_pred CCCcEEEeCCCCceecCCCCCCCCcceEEEEE-CCE-EEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC
Q 016368 163 LASPLAFNPQSNTWFFGPQLSIPRRWCAMGSV-GGV-VYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR 240 (390)
Q Consensus 163 ~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~ 240 (390)
...++++|..+++-+.+ ......... +|+ |+...... ......++++|..++. ...+...+.
T Consensus 42 ~~~l~~~d~~~~~~~~l------~~~~~~~~SpDg~~la~~~~~~----~~~~~~l~~~~~~~g~----~~~l~~~~~-- 105 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI------ENATMPRISPDGKKIAFMRANE----EKKVSEIWVADLETLS----SKKILEAKN-- 105 (347)
T ss_dssp EEEEEEEETTTCCEEEE------ESCEEEEECTTSSEEEEEEEET----TTTEEEEEEEETTTTE----EEEEEEESE--
T ss_pred cceEEEEeCCCCceEEc------ccCCCeEECCCCCEEEEEEecc----CCCcceEEEEECCCCc----eEEEEcCCC--
Confidence 45789999988876555 111122222 454 44433221 1123468899998877 665544332
Q ss_pred ccccceEEEE-ECCE-EEEEccc------------------C-----CCCceeEEEeCCCCCe-EecCCCCCCCCCCceE
Q 016368 241 FSREAVEAVG-FKGN-LCMVNLK------------------G-----NGAKDGAIYNVELDKW-KEMPEGMHAGWNGPAA 294 (390)
Q Consensus 241 ~~r~~~~~~~-~~g~-lyv~gg~------------------g-----~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~ 294 (390)
. ...+. -+|+ |++.... | .....+.++|+.+++. ..+.. + .....
T Consensus 106 ~----~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~---~~~~~ 176 (347)
T 2gop_A 106 I----RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P---RFSSG 176 (347)
T ss_dssp E----EEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--E---TTCEE
T ss_pred c----cceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C---Ccccc
Confidence 1 22222 2554 4333210 0 0023456788888776 44433 1 22233
Q ss_pred EEeeCCeEEEEeCC---------CCcEEEEECCCCceEEcccccccccceeEEEECCE-EEEEeeC-------CceEEEE
Q 016368 295 STMNEEELYVVNEG---------KGRLSKYDADHDWWDEVIELAELKGAEKITAARGR-VCAVCEN-------GERIMVV 357 (390)
Q Consensus 295 ~~~~~g~lyv~gg~---------~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~-l~i~g~~-------~~~v~~~ 357 (390)
....+| +++.+.. ...++.+| +.+++.+..- ...... .-+|+ |++.+.. ...++++
T Consensus 177 ~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 177 IWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp EEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE---ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEE
T ss_pred cCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC---cceeeE-CCCCCEEEEEEccccCCccccceEEEE
Confidence 332566 6555532 22788888 5666666432 112223 44554 5555422 2478888
Q ss_pred E
Q 016368 358 D 358 (390)
Q Consensus 358 d 358 (390)
|
T Consensus 250 d 250 (347)
T 2gop_A 250 D 250 (347)
T ss_dssp C
T ss_pred C
Confidence 8
No 311
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=59.92 E-value=1.2e+02 Score=28.79 Aligned_cols=182 Identities=8% Similarity=-0.049 Sum_probs=93.8
Q ss_pred CCcEEEeCCCCceecCCCCCCCC-c-ceEEEE--------ECC-EEEEEeccCCCCCCCccCeEEEEECCC-Ccccccc-
Q 016368 164 ASPLAFNPQSNTWFFGPQLSIPR-R-WCAMGS--------VGG-VVYVASGVGAHYRGDVARSMKKWDLKS-DREDWKW- 230 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~~~r-~-~~~~~~--------~~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t-~~~~~~W- 230 (390)
+.+.+.|+.++....+....... . -...++ .++ .||+.--.... ......+.+++... +. |
T Consensus 162 ~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~--~~~~~~V~~i~r~~~G~----~~ 235 (496)
T 3kya_A 162 KAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK--GDESPSVYIIKRNADGT----FD 235 (496)
T ss_dssp EEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT--GGGEEEEEEEECCTTSC----CS
T ss_pred CeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC--cccCceEEEEecCCCCc----ee
Confidence 46889999999887764433211 1 223333 134 58887543310 01234577787655 34 4
Q ss_pred -----EEcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCC-------CCC-eEecCC----------CC
Q 016368 231 -----EKKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVE-------LDK-WKEMPE----------GM 285 (390)
Q Consensus 231 -----~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~-------~~~-W~~~~~----------~~ 285 (390)
..++.+.. .+++++. ++.||+.- .....+.+||++ +++ |+...+ ..
T Consensus 236 ~~~~~~~v~~~~~------p~giavdp~~g~LYvtd---~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~ 306 (496)
T 3kya_A 236 DRSDIQLIAAYKQ------CNGATIHPINGELYFNS---YEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI 306 (496)
T ss_dssp TTSCEEEEEEESC------CCCEEECTTTCCEEEEE---TTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC
T ss_pred ecccceeeccCCC------ceEEEEcCCCCeEEEEE---CCCCEEEEEecccccccccCceeecccccccccccceeEec
Confidence 33433221 2445544 57899882 234457889987 443 432111 01
Q ss_pred CCCCCCceEEEeeCCe-EEEEeCCCCcEEEEEC--CCCce---EEcccc-c------------ccccce-eEEE------
Q 016368 286 HAGWNGPAASTMNEEE-LYVVNEGKGRLSKYDA--DHDWW---DEVIEL-A------------ELKGAE-KITA------ 339 (390)
Q Consensus 286 ~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd~--~~~~W---~~i~~~-p------------~~r~~~-~~~~------ 339 (390)
+.......+++..+|. ||+.......|+++|. .+... ..+... . ...... .+++
T Consensus 307 ~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~ 386 (496)
T 3kya_A 307 ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYT 386 (496)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCC
T ss_pred CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccc
Confidence 1111122344324565 8999877788999554 43322 112111 0 011223 3444
Q ss_pred --ECCEEEEEeeCCceEEEEEcC
Q 016368 340 --ARGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 340 --~~g~l~i~g~~~~~v~~~d~~ 360 (390)
.+|.|||.=..+..|..++..
T Consensus 387 ~~~~g~lyVaD~~N~rIr~i~~~ 409 (496)
T 3kya_A 387 GEEEYDFYFVDRLNFCVRKVTPE 409 (496)
T ss_dssp SSCCEEEEEEEGGGTEEEEECTT
T ss_pred ccCCCeEEEEECCCCEEEEEeCC
Confidence 346888875556688888843
No 312
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=59.88 E-value=69 Score=26.04 Aligned_cols=62 Identities=11% Similarity=0.051 Sum_probs=36.2
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEe-----cCCCC-CCCCCCceEEEeeCC-eEEEEeCCCCcEEEEECCCCc
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKE-----MPEGM-HAGWNGPAASTMNEE-ELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-----~~~~~-~~~~~~~~~~~~~~g-~lyv~gg~~~~v~~yd~~~~~ 321 (390)
++++|++ -+...+.||..+++=.. +.. + ..+..-.++....++ ++|++-| ...|+||..+.+
T Consensus 109 ~g~~yfF-----kG~~yw~yd~~~~~v~~gyPk~i~~-~~gip~~idaAf~~~~~~~~YfFkg--~~y~r~d~~~~~ 177 (196)
T 3c7x_A 109 NGKTYFF-----RGNKYYRFNEELRAVDSEYPKNIKV-WEGIPESPRGSFMGSDEVFTYFYKG--NKYWKFNNQKLK 177 (196)
T ss_dssp TTEEEEE-----ETTEEEEEETTTTEECTTCSEEGGG-SBTCCSSCSEEEECTTSSEEEEEET--TEEEEEETTTTE
T ss_pred CCEEEEE-----ECCEEEEEeCCcccccCCCCccHHH-CCCcCCCcceeEEecCCCEEEEEEC--CEEEEEECCcce
Confidence 6899999 45667899987643111 111 1 111122233321244 8999965 578999988653
No 313
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=59.21 E-value=1.4e+02 Score=29.73 Aligned_cols=152 Identities=10% Similarity=0.017 Sum_probs=77.6
Q ss_pred CCcEEEeCCC--CceecCCCCCCCCcceEEEEECCEEEEEeccCCCC--CCCccCeEEEEECCC--------CccccccE
Q 016368 164 ASPLAFNPQS--NTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHY--RGDVARSMKKWDLKS--------DREDWKWE 231 (390)
Q Consensus 164 ~~~~~~dp~t--~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~--~~~~~~~~~~yd~~t--------~~~~~~W~ 231 (390)
+.++..+... .+|..+ ..++...-....++++|+....+... .......+.++|..+ .. |+
T Consensus 269 ~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~ 341 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI---NMPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTS----LK 341 (711)
T ss_dssp EEEEEEECSSSSCEEEEC---CSCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTT----CE
T ss_pred eeEEEEcCCCCCCcceEe---ecCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCccccccccccc----ce
Confidence 4455555432 556665 23333222456699999976433100 011345788888765 24 88
Q ss_pred E-cccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecC-CCCCCCCCCceEEE-ee-CCeEEEEeC
Q 016368 232 K-KAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMP-EGMHAGWNGPAAST-MN-EEELYVVNE 307 (390)
Q Consensus 232 ~-~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~-~~-~g~lyv~gg 307 (390)
. +.+-.... -......++.+++.. ...+.....++|+.++.|.... ...|.. ....... .. ++.+++...
T Consensus 342 ~~~~~~~~~~----l~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~~s 415 (711)
T 4hvt_A 342 ILFTPTANEV----FNFISTTKDRVFLAT-YDNVVAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEALITIE 415 (711)
T ss_dssp EEECCCTTEE----EEEEEECSSCEEEEE-EETTEEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEEEEEE
T ss_pred EEECCCCCCe----EEEEEEECCEEEEEE-EECCEEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEEEEEe
Confidence 6 44332221 134455677777652 1112344668888888775322 112221 1112211 12 344554433
Q ss_pred -C--CCcEEEEECCCCceEEccccc
Q 016368 308 -G--KGRLSKYDADHDWWDEVIELA 329 (390)
Q Consensus 308 -~--~~~v~~yd~~~~~W~~i~~~p 329 (390)
. ...++.||.. .+++.+...+
T Consensus 416 s~~~P~~~~~~d~~-~~~~~l~~~~ 439 (711)
T 4hvt_A 416 NSIVPPTIYLWVKT-HELKIIRKAL 439 (711)
T ss_dssp CSSSCCEEEEECTT-SCEEEEECCS
T ss_pred cCCCCCEEEEEeCC-CcEEEEecCC
Confidence 2 3489999988 7777765443
No 314
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=58.97 E-value=1.2e+02 Score=28.47 Aligned_cols=32 Identities=19% Similarity=0.095 Sum_probs=21.5
Q ss_pred eCC-eEEEEeCCCCcEEEEECC-CCceEEccccc
Q 016368 298 NEE-ELYVVNEGKGRLSKYDAD-HDWWDEVIELA 329 (390)
Q Consensus 298 ~~g-~lyv~gg~~~~v~~yd~~-~~~W~~i~~~p 329 (390)
.+| .||+-....+.|.+||.. ..+.+.+..++
T Consensus 330 ~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 330 LDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVK 363 (462)
T ss_dssp TTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEE
Confidence 444 677777667899999985 44556555444
No 315
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=55.94 E-value=73 Score=28.41 Aligned_cols=59 Identities=14% Similarity=0.178 Sum_probs=39.9
Q ss_pred CCeEEEEeC----------CCCcEEEEECCCCceEEcccccccccceeEEEE-C-CEEEEEeeCCceEEEEEcCCC
Q 016368 299 EEELYVVNE----------GKGRLSKYDADHDWWDEVIELAELKGAEKITAA-R-GRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg----------~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~-g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++++|+... ..+.+++||.++. +.+..++... ..+++.. + ..||+.+ . +.|.+||..+.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--~~v~~i~~~~-p~~ia~spdg~~l~v~n-~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--QRVARIPGRD-ALSMTIDQQRNLMLTLD-G-GNVNVYDISQP 335 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--EEEEEEECTT-CCEEEEETTTTEEEEEC-S-SCEEEEECSSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCC--cEEEEEecCC-eeEEEECCCCCEEEEeC-C-CeEEEEECCCC
Confidence 488898753 1248999998876 4566666555 6666665 4 4566553 3 89999998765
No 316
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=53.31 E-value=1.2e+02 Score=27.96 Aligned_cols=105 Identities=9% Similarity=-0.031 Sum_probs=52.9
Q ss_pred CEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccccccc
Q 016368 253 GNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELK 332 (390)
Q Consensus 253 g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r 332 (390)
+.+++.++ ....+.+||..+..-.. .. ........+++...+|+.++.|+.++.+..||.....-..+.......
T Consensus 162 ~~~las~s---~Dg~v~iwD~~~~~~~~-~~-~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~ 236 (434)
T 2oit_A 162 PSMVAVCL---ADGSIAVLQVTETVKVC-AT-LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYE 236 (434)
T ss_dssp TTEEEEEE---TTSCEEEEEESSSEEEE-EE-ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCC
T ss_pred CCEEEEEE---CCCeEEEEEcCCCccee-ec-cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccC
Confidence 45555531 23457788887762111 11 111111122332347888888989999999998833222222111101
Q ss_pred -----cceeEEEECCEEEEEe--eCC------ceEEEEEcCCC
Q 016368 333 -----GAEKITAARGRVCAVC--ENG------ERIMVVDVLAS 362 (390)
Q Consensus 333 -----~~~~~~~~~g~l~i~g--~~~------~~v~~~d~~~~ 362 (390)
...++....+..++++ ... ..+.++|+.+.
T Consensus 237 ~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 237 SDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 1223334445555543 111 25888898765
No 317
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=52.98 E-value=1.2e+02 Score=28.35 Aligned_cols=139 Identities=8% Similarity=0.047 Sum_probs=0.0
Q ss_pred EEEEE-CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC----ccccceEEEEE-----CCEEEEEc
Q 016368 190 AMGSV-GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR----FSREAVEAVGF-----KGNLCMVN 259 (390)
Q Consensus 190 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~----~~r~~~~~~~~-----~g~lyv~g 259 (390)
+++.. +|+|||. ......+.+++..+.. -+.+..++... .......++.. ++.||+.
T Consensus 31 ~~a~~pdG~l~V~--------e~~gg~I~~~~~~~g~----~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~- 97 (454)
T 1cru_A 31 ALLWGPDNQIWLT--------ERATGKILRVNPESGS----VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS- 97 (454)
T ss_dssp EEEECTTSCEEEE--------ETTTCEEEEECTTTCC----EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE-
T ss_pred EEEEcCCCcEEEE--------EcCCCEEEEEECCCCc----EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE-
Q ss_pred ccCCC--------------CceeEEEeCCC-----CCeEecCCCCCCC--CCCceEEEeeCCeEEEEeCC----------
Q 016368 260 LKGNG--------------AKDGAIYNVEL-----DKWKEMPEGMHAG--WNGPAASTMNEEELYVVNEG---------- 308 (390)
Q Consensus 260 g~g~~--------------~~~~~~yd~~~-----~~W~~~~~~~~~~--~~~~~~~~~~~g~lyv~gg~---------- 308 (390)
. ...+..|+... ...+.+-..++.. +....++..-+|+||+.-|.
T Consensus 98 ----~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~ 173 (454)
T 1cru_A 98 ----GTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLF 173 (454)
T ss_dssp ----EEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTT
T ss_pred ----EeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccc
Q ss_pred ----------------------CCcEEEEECCCC-----------ceEEcccccccccceeEEEE-CCEEEEE
Q 016368 309 ----------------------KGRLSKYDADHD-----------WWDEVIELAELKGAEKITAA-RGRVCAV 347 (390)
Q Consensus 309 ----------------------~~~v~~yd~~~~-----------~W~~i~~~p~~r~~~~~~~~-~g~l~i~ 347 (390)
.+.|+++|+... ....... ..|...+++.. .|.||+.
T Consensus 174 ~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~--G~RNp~gla~dp~G~L~~~ 244 (454)
T 1cru_A 174 LPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL--GHRNPQGLAFTPNGKLLQS 244 (454)
T ss_dssp SCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB--CCSEEEEEEECTTSCEEEE
T ss_pred cccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE--CCCCcceEEECCCCCEEEE
No 318
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=52.75 E-value=1.5e+02 Score=27.69 Aligned_cols=64 Identities=14% Similarity=0.107 Sum_probs=38.7
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEe-----cCCCC-CCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceE
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKE-----MPEGM-HAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWD 323 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-----~~~~~-~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~ 323 (390)
++++|++ -+...++||..+.+-.. +...+ ..+..--++.. .+|++|+|-| ...|+||..+.+=.
T Consensus 367 ~~k~yfF-----kG~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~-~~g~~YFFkg--~~ywr~d~~~~~v~ 436 (450)
T 1su3_A 367 TGKTYFF-----VANKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFM-KDGFFYFFHG--TRQYKFDPKTKRIL 436 (450)
T ss_dssp TTEEEEE-----ETTEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEE-ETTEEEEEET--TEEEEEETTTTEEE
T ss_pred CCeEEEE-----eCCEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEE-cCCeEEEEeC--CEEEEEECCcceEe
Confidence 6899999 45678899876542111 11001 11112223443 7899999976 47899998876433
No 319
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=51.70 E-value=2e+02 Score=28.89 Aligned_cols=94 Identities=16% Similarity=0.232 Sum_probs=52.0
Q ss_pred cEEcccCCCCCccccceEEEEE----CCEEEEEcccCCCCceeEEEeCC--CCCeEecCCCCCC----------------
Q 016368 230 WEKKAQLKDGRFSREAVEAVGF----KGNLCMVNLKGNGAKDGAIYNVE--LDKWKEMPEGMHA---------------- 287 (390)
Q Consensus 230 W~~~~~~~~~~~~r~~~~~~~~----~g~lyv~gg~g~~~~~~~~yd~~--~~~W~~~~~~~~~---------------- 287 (390)
|+++..++...........+.+ .+.+|+....+ + .+|-.. -.+|+.+.. .+.
T Consensus 167 W~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~--g---~v~~S~DgG~tW~~~~~-~~~~~~~~~~~~~~p~~~~ 240 (763)
T 3a0f_A 167 WSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV--G---GLWVTWDGGANWSQVGG-QPTQWSDWTKSIVAASGTA 240 (763)
T ss_dssp CEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST--T---CEEEESSSSSSCEECTT-CCCSCCHHHHHHHHHHCCC
T ss_pred ccccccCcccCCCccceEEEEECCCCCCEEEEEEeCC--C---eEEEECCCCCCccccCC-Ccccccccccccccccccc
Confidence 9999876643211112333333 34688763111 1 233222 358999874 332
Q ss_pred ----CCCCceEEEeeCCeEEEEe--------CCCCcEEEEECCCCceEEccccc
Q 016368 288 ----GWNGPAASTMNEEELYVVN--------EGKGRLSKYDADHDWWDEVIELA 329 (390)
Q Consensus 288 ----~~~~~~~~~~~~g~lyv~g--------g~~~~v~~yd~~~~~W~~i~~~p 329 (390)
+...+.+++..++.||+.. +..+.+++.+-...+|+++..++
T Consensus 241 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~ 294 (763)
T 3a0f_A 241 IQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSR 294 (763)
T ss_dssp CSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTS
T ss_pred ccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCC
Confidence 1111223321368899884 34458999998899999987554
No 320
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=51.65 E-value=1.4e+02 Score=26.96 Aligned_cols=149 Identities=11% Similarity=0.013 Sum_probs=76.9
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCcccccc-EEcccCCCCCccccceE-EEEECCEEEEEccc---------CC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKW-EKKAQLKDGRFSREAVE-AVGFKGNLCMVNLK---------GN 263 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W-~~~~~~~~~~~~r~~~~-~~~~~g~lyv~gg~---------g~ 263 (390)
++.+++-|+.+. .+.++|+++++ - ..+..-..... .... +..-+|++.+.+.. |.
T Consensus 192 ~~~~LaSgS~D~--------TIkIWDl~TGk----~l~tL~g~~~~v~--~v~~vafSpdG~~lvs~s~~~~~w~laSGs 257 (356)
T 2w18_A 192 MQEALLGTTIMN--------NIVIWNLKTGQ----LLKKMHIDDSYQA--SVCHKAYSEMGLLFIVLSHPCAKESESLRS 257 (356)
T ss_dssp STTEEEEEETTS--------EEEEEETTTCC----EEEEEECCC---C--CCEEEEEEETTEEEEEEC------------
T ss_pred CCceEEEecCCC--------cEEEEECCCCc----EEEEEcCCCccee--eeEEEEECCCCCEEEEeccCCCcceeeccC
Confidence 346666666654 88999999887 3 22321000000 0111 23347777655321 11
Q ss_pred CCceeEEEeCCCCCeEecCC-CCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEccccccccc-ceeEEEE-
Q 016368 264 GAKDGAIYNVELDKWKEMPE-GMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKG-AEKITAA- 340 (390)
Q Consensus 264 ~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~-~~~~~~~- 340 (390)
....+..+|+.+.+-..+-. ..|.+.....+....++.+.+.|..++.+..||..+.+-... +..... ....+.+
T Consensus 258 ~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~t--L~gH~~~vvs~vafS 335 (356)
T 2w18_A 258 PVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTAL--LPPVSDQHWSFVKWS 335 (356)
T ss_dssp CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEE--ECCC--CCCCEEEEC
T ss_pred CCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEE--ecCCCCCeEEEEEEC
Confidence 22344568887664322110 012222222221113355677777888999999998764432 322221 2222233
Q ss_pred -CCEEEEEeeCCceEEEEEc
Q 016368 341 -RGRVCAVCENGERIMVVDV 359 (390)
Q Consensus 341 -~g~l~i~g~~~~~v~~~d~ 359 (390)
+|+..+-|+.++.|.+||.
T Consensus 336 PDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 336 GTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSSSEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEECCCcEEEecC
Confidence 6777777777888999885
No 321
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=51.41 E-value=1.6e+02 Score=27.55 Aligned_cols=60 Identities=13% Similarity=0.165 Sum_probs=36.9
Q ss_pred CCeEEEEeCCCCcEEEEECCCCceE-----Ecc-cccc-cccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 299 EEELYVVNEGKGRLSKYDADHDWWD-----EVI-ELAE-LKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~W~-----~i~-~~p~-~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
++++|+|-| +..|+||..+..-. .|. ..|. +...-++...+|++|++ . ++..|.||..+.
T Consensus 367 ~~k~yfFkG--~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFF-k-g~~ywr~d~~~~ 433 (450)
T 1su3_A 367 TGKTYFFVA--NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFF-H-GTRQYKFDPKTK 433 (450)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEE-E-TTEEEEEETTTT
T ss_pred CCeEEEEeC--CEEEEEeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEE-e-CCEEEEEECCcc
Confidence 699999976 58999998753211 111 1111 11112333468999998 4 347889997765
No 322
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=50.12 E-value=1.9e+02 Score=28.17 Aligned_cols=105 Identities=8% Similarity=0.049 Sum_probs=47.4
Q ss_pred CeEEEEECCCCccccccEEcccCCCCCccccc-eEEE-EECCEEEEEccc-CCCCceeEEEeCCCCCeEecCCCCCCCCC
Q 016368 214 RSMKKWDLKSDREDWKWEKKAQLKDGRFSREA-VEAV-GFKGNLCMVNLK-GNGAKDGAIYNVELDKWKEMPEGMHAGWN 290 (390)
Q Consensus 214 ~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~-~~~~-~~~g~lyv~gg~-g~~~~~~~~yd~~~~~W~~~~~~~~~~~~ 290 (390)
..+.++|..++.. -..+............ ..++ .-+|++.+.... +.....+.++|+.+++...+.........
T Consensus 228 ~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 304 (723)
T 1xfd_A 228 ISLHVIGLNGPTH---DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWL 304 (723)
T ss_dssp EEEEEEESSSSCC---CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred eEEEEEECCCCce---eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEE
Confidence 3788999988761 1333321100000001 1122 237776544311 11224466889988776544210111111
Q ss_pred C---ceEEEeeCCe-EEEE-eCCCC------cEEEEE-CCCCc
Q 016368 291 G---PAASTMNEEE-LYVV-NEGKG------RLSKYD-ADHDW 321 (390)
Q Consensus 291 ~---~~~~~~~~g~-lyv~-gg~~~------~v~~yd-~~~~~ 321 (390)
. ...+...+|+ |++. ...++ .++.+| ..+..
T Consensus 305 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 305 HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred eccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 1 1222225666 4444 33444 688898 45444
No 323
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=49.04 E-value=29 Score=32.19 Aligned_cols=59 Identities=12% Similarity=0.052 Sum_probs=39.2
Q ss_pred CeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEeeCCceEEEEEcC
Q 016368 300 EELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 300 g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~ 360 (390)
+.+++.++.++.+..||..+.. .+............+.+ +|+.++.|+.++.|.+||+.
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~--~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETV--KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSE--EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCEEEEEECCCeEEEEEcCCCc--ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 6788888889999999998762 22111112222233333 67777777778899999987
No 324
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=48.74 E-value=2.2e+02 Score=28.42 Aligned_cols=181 Identities=6% Similarity=-0.055 Sum_probs=85.6
Q ss_pred CCcEEEeCCCC-ceecCCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCCCCC
Q 016368 164 ASPLAFNPQSN-TWFFGPQLSIPRRWCAMGSV-GG-VVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLKDGR 240 (390)
Q Consensus 164 ~~~~~~dp~t~-~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~~~~ 240 (390)
..++++|..++ +. ++.. .+......+.. ++ .|+... .+. ......++.++..+.... =..+-..+...
T Consensus 201 ~~l~v~dl~~g~~~--l~~~-~~~~~~~~~WspDg~~l~y~~-~d~---~~~~~~v~~~~lgt~~~~--~~lv~~~~~~~ 271 (751)
T 2xe4_A 201 YTIEFKRISDPSQT--IADK-VSGTNGEIVWGPDHTSLFYVT-KDE---TLRENKVWRHVMGKLQSE--DVCLYEEHNPL 271 (751)
T ss_dssp EEEEEEETTCTTCC--CCCC-EEEECSCCEECSSTTEEEEEE-ECT---TCCEEEEEEEETTSCGGG--CEEEEECCCTT
T ss_pred EEEEEEECCCCCEe--CCcc-ccCceeeEEEecCCCEEEEEE-ECC---CCCCCEEEEEECCCCchh--cEEEEecCCCc
Confidence 35999999988 62 2211 11111112221 43 454442 221 112246788888765400 01221111111
Q ss_pred ccccceEE-EEECCEEEEEcccCCCCceeEEEeCCCC--Ce--EecCCCCCCCCCCceEE-EeeCCeEEEEeCCC----C
Q 016368 241 FSREAVEA-VGFKGNLCMVNLKGNGAKDGAIYNVELD--KW--KEMPEGMHAGWNGPAAS-TMNEEELYVVNEGK----G 310 (390)
Q Consensus 241 ~~r~~~~~-~~~~g~lyv~gg~g~~~~~~~~yd~~~~--~W--~~~~~~~~~~~~~~~~~-~~~~g~lyv~gg~~----~ 310 (390)
+ .... ..-+|+..++.........+.++|+.+. .+ +.+...... ...+.. . .++.||+....+ .
T Consensus 272 ~---~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~--~~~s~~~~-~g~~l~~~t~~~~a~~~ 345 (751)
T 2xe4_A 272 F---SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKG--VRYDVQMH-GTSHLVILTNEGGAVNH 345 (751)
T ss_dssp C---EEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTT--CCEEEEEE-TTTEEEEEECTTTCTTC
T ss_pred e---EEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCC--ceEEEeee-eCCEEEEEeCCCCCCCc
Confidence 1 1222 2235553333221222345667888765 56 555431111 111111 1 378888886543 3
Q ss_pred cEEEEECCC-CceEE-cccccccccceeEEEECCEEEEEeeCC--ceEEEEEc
Q 016368 311 RLSKYDADH-DWWDE-VIELAELKGAEKITAARGRVCAVCENG--ERIMVVDV 359 (390)
Q Consensus 311 ~v~~yd~~~-~~W~~-i~~~p~~r~~~~~~~~~g~l~i~g~~~--~~v~~~d~ 359 (390)
.++++|..+ ..|+. +-..........+...++.|++....+ ..++++|+
T Consensus 346 ~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 346 KLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 899999886 67876 432111111123444577787765332 36788886
No 325
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=48.13 E-value=1.2e+02 Score=25.19 Aligned_cols=102 Identities=12% Similarity=0.127 Sum_probs=53.8
Q ss_pred EEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCC---------CCCCC--CCCceEEE--eeCCeEEEEeCCCCcEEE
Q 016368 248 AVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPE---------GMHAG--WNGPAAST--MNEEELYVVNEGKGRLSK 314 (390)
Q Consensus 248 ~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~---------~~~~~--~~~~~~~~--~~~g~lyv~gg~~~~v~~ 314 (390)
+...+|++|++ -+...++|+..++ .+..+. ++|.. ....-++. ..++++|++-| +..|+
T Consensus 68 A~~~~~~~yfF-----kG~~yw~~~~~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--~~ywr 139 (219)
T 1hxn_A 68 AFSWEDKLYLI-----QDTKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--RRLWW 139 (219)
T ss_dssp EEEETTEEEEE-----ETTEEEEEECSSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--TEEEE
T ss_pred EEEECCcEEEe-----cCCEEEEEeCCCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--CEEEE
Confidence 33459999999 4566788886532 111110 12221 11123332 13689999976 57899
Q ss_pred EECCC---CceEEcccccccccceeEEE-----------ECCEEEEEeeCCceEEEEEcC
Q 016368 315 YDADH---DWWDEVIELAELKGAEKITA-----------ARGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 315 yd~~~---~~W~~i~~~p~~r~~~~~~~-----------~~g~l~i~g~~~~~v~~~d~~ 360 (390)
||..+ ..|...+-+|. ....++.. .++.+|++ .+ ...+.+|..
T Consensus 140 ~d~~~~P~~i~~~~~g~p~-~vdAa~~~~~~~~~~~~~~~~~~~YFF-kg-~~y~r~~~~ 196 (219)
T 1hxn_A 140 LDLKSGAQATWTELPWPHE-KVDGALCMEKPLGPNSCSTSGPNLYLI-HG-PNLYCYRHV 196 (219)
T ss_dssp EEGGGGGGCCCEEECCSCS-CCSEEEEESSCSSSCCSCSSSCEEEEE-ET-TEEEEESSH
T ss_pred EeCCCCceEhhhcCCCCCC-CcCEEEEccccccccceeccCCeEEEE-EC-CEEEEEeCC
Confidence 99754 23443332221 22223331 35678888 32 366666653
No 326
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=47.51 E-value=1.5e+02 Score=26.36 Aligned_cols=199 Identities=12% Similarity=0.096 Sum_probs=98.0
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecC--CCC---CCCCcc-eEEEEE----CCEEEEEeccCCCC-----CCC
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFG--PQL---SIPRRW-CAMGSV----GGVVYVASGVGAHY-----RGD 211 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~--~~~---~~~r~~-~~~~~~----~~~lyv~GG~~~~~-----~~~ 211 (390)
++.++++.. ....|.++||..+.-..+ +.. ..+... .++.+. +++|+++.-....+ ...
T Consensus 24 ~g~~~vs~l------~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~ 97 (334)
T 2p9w_A 24 RQVFYQSNL------YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSH 97 (334)
T ss_dssp TTEEEEEET------TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSS
T ss_pred CCEEEEEec------cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccC
Confidence 467777643 336799999987654333 221 122222 344442 57888863211110 011
Q ss_pred ccCeEEEEECC---CCccccccEE-cccCCCC-------CccccceEEEE-ECCEEEEEcccCCCC-ceeEEEeCCCC--
Q 016368 212 VARSMKKWDLK---SDREDWKWEK-KAQLKDG-------RFSREAVEAVG-FKGNLCMVNLKGNGA-KDGAIYNVELD-- 276 (390)
Q Consensus 212 ~~~~~~~yd~~---t~~~~~~W~~-~~~~~~~-------~~~r~~~~~~~-~~g~lyv~gg~g~~~-~~~~~yd~~~~-- 276 (390)
....+.+||+. |++. .|.. +...... .. .....+++ -+|.+||.+- .. ..+..+|+...
T Consensus 98 g~~~v~~~Dl~~~~tg~~--~~~~dL~~~~~~~~~~~g~~~-~~~nDvavD~~GnaYVt~s---~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 98 GASSFHSFNLPLSENSKP--VWSVNFEKVQDEFEKKAGKRP-FGVVQSAQDRDGNSYVAFA---LGMPAIARVSADGKTV 171 (334)
T ss_dssp SCCEEEEEESSCCTTCCC--SEEEESHHHHHHHHHHHSSCC-EEEEEEEECTTSCEEEEEE---ESSCEEEEECTTSCCE
T ss_pred CCCEEEEEcCCcCCCCCE--EEEecCccccccccccccccc-cCCceeEECCCCCEEEeCC---CCCCeEEEEeCCCCEE
Confidence 24679999988 5541 1442 1111110 11 00123333 3789999742 23 45777887654
Q ss_pred -CeEecCCCCCCCCCCc-eEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcccc--c---ccccceeE-EE-ECCEEEEE
Q 016368 277 -KWKEMPEGMHAGWNGP-AASTMNEEELYVVNEGKGRLSKYDADHDWWDEVIEL--A---ELKGAEKI-TA-ARGRVCAV 347 (390)
Q Consensus 277 -~W~~~~~~~~~~~~~~-~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~--p---~~r~~~~~-~~-~~g~l~i~ 347 (390)
.|-...+ ....+.+. +++...+|.++++....+.+++||..+....+++.. . .....-++ .. .+|++.++
T Consensus 172 ~~~~~~~~-~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV 250 (334)
T 2p9w_A 172 STFAWESG-NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLV 250 (334)
T ss_dssp EEEEECCC-CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEE
T ss_pred eeeeecCC-CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEE
Confidence 2543222 22223333 445423565555544488999999885322122210 0 11122232 22 58999777
Q ss_pred eeCCceEEEEE
Q 016368 348 CENGERIMVVD 358 (390)
Q Consensus 348 g~~~~~v~~~d 358 (390)
+...+.++++.
T Consensus 251 ~~~~~~~~~l~ 261 (334)
T 2p9w_A 251 GARAPYAISFR 261 (334)
T ss_dssp EEETTEEEEEE
T ss_pred EcCCCCEEEEE
Confidence 65545555554
No 327
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=46.33 E-value=1.7e+02 Score=26.40 Aligned_cols=95 Identities=15% Similarity=0.191 Sum_probs=55.0
Q ss_pred CceeEEE--eCCCCCeEecCCC-CC--CC-CCCceEEE---eeCCeEEEEe-CCCCcEEEEECC---CCce--EEccccc
Q 016368 265 AKDGAIY--NVELDKWKEMPEG-MH--AG-WNGPAAST---MNEEELYVVN-EGKGRLSKYDAD---HDWW--DEVIELA 329 (390)
Q Consensus 265 ~~~~~~y--d~~~~~W~~~~~~-~~--~~-~~~~~~~~---~~~g~lyv~g-g~~~~v~~yd~~---~~~W--~~i~~~p 329 (390)
...+.+| |+.+++++.+... .| .. ..-.++|. ...+++|++- +.++.+..|+.. .... +.+.+++
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 4556677 7788899998651 12 22 33344443 1246665543 344677777663 2222 3344444
Q ss_pred ccccceeEEEE--CCEEEEEeeCCceEEEEEcC
Q 016368 330 ELKGAEKITAA--RGRVCAVCENGERIMVVDVL 360 (390)
Q Consensus 330 ~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~ 360 (390)
..-...+|++- .++|||- ..+..||.||..
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~-eEd~GIw~~da~ 209 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIA-EEDEAIWKFSAE 209 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEE-ETTTEEEEEECS
T ss_pred CCCCcceEEEcCCCCeEEEe-cccceEEEEeCC
Confidence 44445567775 5888887 545679999954
No 328
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=45.51 E-value=1.6e+02 Score=26.76 Aligned_cols=101 Identities=9% Similarity=-0.079 Sum_probs=54.0
Q ss_pred EEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEEcc
Q 016368 247 EAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDEVI 326 (390)
Q Consensus 247 ~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~ 326 (390)
.++. +++..+++ ....+.+||..+..-.........+ -..+.. .... +++...+|.+.+||.++..-..+
T Consensus 92 ~l~f-d~~~L~v~----~~~~l~v~dv~sl~~~~~~~~~~~~--v~~i~~-~~p~-~av~~~dG~L~v~dl~~~~~~~~- 161 (388)
T 1xip_A 92 FVCF-HGDQVLVS----TRNALYSLDLEELSEFRTVTSFEKP--VFQLKN-VNNT-LVILNSVNDLSALDLRTKSTKQL- 161 (388)
T ss_dssp EEEE-ETTEEEEE----ESSEEEEEESSSTTCEEEEEECSSC--EEEEEE-CSSE-EEEEETTSEEEEEETTTCCEEEE-
T ss_pred EEEE-CCCEEEEE----cCCcEEEEEchhhhccCccceeecc--eeeEEe-cCCC-EEEEECCCCEEEEEccCCccccc-
Confidence 3444 66555553 3356789998765422111101111 112222 4445 44445688999999987664432
Q ss_pred cccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 327 ELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 327 ~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.....++.+..+-.++|..++++..|++...
T Consensus 162 -----~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 162 -----AQNVTSFDVTNSQLAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp -----EESEEEEEECSSEEEEEETTSCEEEEEEETT
T ss_pred -----cCCceEEEEcCCceEEEEcCCcEEEEcCCCc
Confidence 2234455542222556677778888887765
No 329
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=44.59 E-value=2.9e+02 Score=28.66 Aligned_cols=134 Identities=12% Similarity=0.078 Sum_probs=64.4
Q ss_pred CeEEEEECCCCccccccEEcccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCC------
Q 016368 214 RSMKKWDLKSDREDWKWEKKAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHA------ 287 (390)
Q Consensus 214 ~~~~~yd~~t~~~~~~W~~~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~------ 287 (390)
..++.++..+.. -+.+..... . ......-+|+..+++ ....+.++|.+...-..+......
T Consensus 226 ~~l~~~~~~g~~----~~~l~~~~~--~---~~~~~SpDG~~la~~----~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~ 292 (1045)
T 1k32_A 226 GQIYSTDLDGKD----LRKHTSFTD--Y---YPRHLNTDGRRILFS----KGGSIYIFNPDTEKIEKIEIGDLESPEDRI 292 (1045)
T ss_dssp CEEEEEETTSCS----CEECCCCCS--S---CEEEEEESSSCEEEE----ETTEEEEECTTTCCEEECCCCCCCBCCSEE
T ss_pred eEEEEEeCCCCc----ceEecCCCC--c---ceeeEcCCCCEEEEE----eCCEEEEecCCceEeeeeccCccccccccc
Confidence 356666765555 444433221 1 122333466544443 234466677655544433321100
Q ss_pred --CCCCceEEEe-eCCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEECCEEEEEeeCCceEE-EEEcCCC
Q 016368 288 --GWNGPAASTM-NEEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAARGRVCAVCENGERIM-VVDVLAS 362 (390)
Q Consensus 288 --~~~~~~~~~~-~~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~~~~v~-~~d~~~~ 362 (390)
......+... .+|+..+++. .+.++.+|..+..-..+...+.... ..+...+|+.++++.....++ ++|+.+.
T Consensus 293 ~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~sdg~~l~~~s~~~~l~~~~d~~~~ 369 (1045)
T 1k32_A 293 ISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRY-VRRGGDTKVAFIHGTREGDFLGIYDYRTG 369 (1045)
T ss_dssp EECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEE-EEECSSSEEEEEEEETTEEEEEEEETTTC
T ss_pred ccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceE-EeeeEcCCCeEEEEECCCceEEEEECCCC
Confidence 0012234433 4666555544 6688999888776555432221011 111111555444445566888 8887654
No 330
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=43.28 E-value=1.4e+02 Score=24.51 Aligned_cols=100 Identities=10% Similarity=0.089 Sum_probs=54.0
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCe---EecCC-CCCCCCCCceEEEee--CCeEEEEeCCCCcEEEEECCCCceE--
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKW---KEMPE-GMHAGWNGPAASTMN--EEELYVVNEGKGRLSKYDADHDWWD-- 323 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W---~~~~~-~~~~~~~~~~~~~~~--~g~lyv~gg~~~~v~~yd~~~~~W~-- 323 (390)
++++|++ -+...++|+..+-.- +.+.. .+|......-+++.. +|++|++-| +..|+||..+++=.
T Consensus 79 ~~~iyfF-----kG~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~~~d~g 151 (207)
T 1pex_A 79 HDLIFIF-----RGRKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--NQVWRYDDTNHIMDKD 151 (207)
T ss_dssp TTEEEEE-----ETTEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--TEEEEEETTTTEECSS
T ss_pred CCcEEEE-----ccCEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--CEEEEEeCcCccccCC
Confidence 6899999 455667776432111 12222 122111122233212 589999976 58899998764311
Q ss_pred ---Ecc----cccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 324 ---EVI----ELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 324 ---~i~----~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.|. .+| ...-++...+|++|++ . +...+.||..+.
T Consensus 152 yPr~i~~~~~Gip--~~iDaAf~~~g~~YfF-k-g~~y~rf~~~~~ 193 (207)
T 1pex_A 152 YPRLIEEDFPGIG--DKVDAVYEKNGYIYFF-N-GPIQFEYSIWSN 193 (207)
T ss_dssp CCCBHHHHSTTSC--SCCSEEEEETTEEEEE-E-TTEEEEEETTTT
T ss_pred CCccHHHcCCCCC--CCccEEEEcCCcEEEE-E-CCEEEEEeCCcc
Confidence 011 111 1122333469999999 4 357888887665
No 331
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=42.25 E-value=1.4e+02 Score=24.21 Aligned_cols=100 Identities=11% Similarity=0.116 Sum_probs=53.5
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCe-EecCC-CCCCCCCCceEEE-eeCCeEEEEeCCCCcEEEEECCCCceEE----
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKW-KEMPE-GMHAGWNGPAAST-MNEEELYVVNEGKGRLSKYDADHDWWDE---- 324 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W-~~~~~-~~~~~~~~~~~~~-~~~g~lyv~gg~~~~v~~yd~~~~~W~~---- 324 (390)
++++|++ -+...++|+..+..- +.+.. ++|......-++. ..+|++|++-| +..|+||..+++=..
T Consensus 64 ~~~~yfF-----kG~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--~~ywr~d~~~~~~~~gyPr 136 (195)
T 1itv_A 64 SKKLFFF-----SGRQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--RRLWRFDVKAQMVDPRSAS 136 (195)
T ss_dssp TCCEEEE-----ETTEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--TEEEEEETTTTEECGGGCE
T ss_pred CCeEEEE-----eCCEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--CEEEEEeCCcccccCCCcc
Confidence 6889998 455567777542110 01111 1221111122222 25799999976 588999987653111
Q ss_pred -cc----cccccccceeEEEECCEEEEEeeCCceEEEEEcCCC
Q 016368 325 -VI----ELAELKGAEKITAARGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 325 -i~----~~p~~r~~~~~~~~~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
|. .+| ....++...+|.+|++ . +...+.+|..+.
T Consensus 137 ~i~~~w~Gvp--~~idaa~~~~g~~Yff-k-g~~y~~~~~~~~ 175 (195)
T 1itv_A 137 EVDRMFPGVP--LDTHDVFQFREKAYFC-Q-DRFYWRVSSRSE 175 (195)
T ss_dssp EHHHHSTTSC--SSCSEEEEETTEEEEE-E-TTEEEEEECCTT
T ss_pred ChhhcCCCCC--CCCCEEEEeCCeEEEE-e-CCEEEEEECCcc
Confidence 11 111 1122344457999998 3 347888887655
No 332
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=40.77 E-value=1.4e+02 Score=24.08 Aligned_cols=102 Identities=10% Similarity=0.075 Sum_probs=53.0
Q ss_pred ECCEEEEEcccCCCCceeEEEeCCCCCe---EecCC---CCCCCCCCceEEE-eeCCeEEEEeCCCCcEEEEECCCCceE
Q 016368 251 FKGNLCMVNLKGNGAKDGAIYNVELDKW---KEMPE---GMHAGWNGPAAST-MNEEELYVVNEGKGRLSKYDADHDWWD 323 (390)
Q Consensus 251 ~~g~lyv~gg~g~~~~~~~~yd~~~~~W---~~~~~---~~~~~~~~~~~~~-~~~g~lyv~gg~~~~v~~yd~~~~~W~ 323 (390)
.+|++|++ -+...++|+..+... +.+.. .+|... --++.. ..++++|++-| +..|+||..+++-.
T Consensus 60 ~~g~~yfF-----kg~~yw~~~~~~~~~gyPk~I~~~~~glP~~~-IDAA~~~~~~g~~yfFkG--~~yw~yd~~~~~v~ 131 (196)
T 3c7x_A 60 KDGKFVFF-----KGDKHWVFDEASLEPGYPKHIKELGRGLPTDK-IDAALFWMPNGKTYFFRG--NKYYRFNEELRAVD 131 (196)
T ss_dssp TTSCEEEE-----ETTEEEEEETTEECTTCSEEGGGTCBSCCSSC-CSEEEEETTTTEEEEEET--TEEEEEETTTTEEC
T ss_pred CCCcEEEe-----cCCEEEEEeCCcccCCCCeEhhhcCCCCCCCc-ccEEEEEccCCEEEEEEC--CEEEEEeCCccccc
Confidence 47889998 455567887542110 01111 122111 122222 13699999976 57899998764321
Q ss_pred -----Ecccccc-cccceeEEEE-CC-EEEEEeeCCceEEEEEcCCC
Q 016368 324 -----EVIELAE-LKGAEKITAA-RG-RVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 324 -----~i~~~p~-~r~~~~~~~~-~g-~l~i~g~~~~~v~~~d~~~~ 362 (390)
.+...+. +....++... ++ ++|++ . +...+.+|..+.
T Consensus 132 ~gyPk~i~~~~gip~~idaAf~~~~~~~~YfF-k-g~~y~r~d~~~~ 176 (196)
T 3c7x_A 132 SEYPKNIKVWEGIPESPRGSFMGSDEVFTYFY-K-GNKYWKFNNQKL 176 (196)
T ss_dssp TTCSEEGGGSBTCCSSCSEEEECTTSSEEEEE-E-TTEEEEEETTTT
T ss_pred CCCCccHHHCCCcCCCcceeEEecCCCEEEEE-E-CCEEEEEECCcc
Confidence 1111111 1111223333 44 89998 3 357888887654
No 333
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=38.64 E-value=2.1e+02 Score=25.30 Aligned_cols=71 Identities=10% Similarity=0.189 Sum_probs=40.3
Q ss_pred CCEEEEEcc-cCC------CCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCe-EEEEeCCCCcEEEEECCCCceE
Q 016368 252 KGNLCMVNL-KGN------GAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEE-LYVVNEGKGRLSKYDADHDWWD 323 (390)
Q Consensus 252 ~g~lyv~gg-~g~------~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~-lyv~gg~~~~v~~yd~~~~~W~ 323 (390)
++++|+... .+. ....+.++|+++.+ .+.. .+.+. ..+++..-+|+ ||+.+ . +.+.+||.++.+-+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~-i~~~~-p~~ia~spdg~~l~v~n-~-~~v~v~D~~t~~l~ 338 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVAR-IPGRD-ALSMTIDQQRNLMLTLD-G-GNVNVYDISQPEPK 338 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEE-EECTT-CCEEEEETTTTEEEEEC-S-SCEEEEECSSSSCE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEE-EecCC-eeEEEECCCCCEEEEeC-C-CeEEEEECCCCcce
Confidence 478998742 111 13467889988764 3332 22223 33444324554 55444 4 89999998876336
Q ss_pred Ecccc
Q 016368 324 EVIEL 328 (390)
Q Consensus 324 ~i~~~ 328 (390)
.+..+
T Consensus 339 ~~~~i 343 (361)
T 2oiz_A 339 LLRTI 343 (361)
T ss_dssp EEEEE
T ss_pred eeEEe
Confidence 66654
No 334
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=36.91 E-value=1.8e+02 Score=24.01 Aligned_cols=63 Identities=11% Similarity=-0.031 Sum_probs=36.5
Q ss_pred ECCEEEEEcccCCCCceeEEEeCCCCCeEe-----cCCCC-CCCCCCceEEEeeC--CeEEEEeCCCCcEEEEECCCCc
Q 016368 251 FKGNLCMVNLKGNGAKDGAIYNVELDKWKE-----MPEGM-HAGWNGPAASTMNE--EELYVVNEGKGRLSKYDADHDW 321 (390)
Q Consensus 251 ~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~-----~~~~~-~~~~~~~~~~~~~~--g~lyv~gg~~~~v~~yd~~~~~ 321 (390)
.+|++|++ -+...+.||..+++=.. +...+ ..+..-.++.. .+ |.+|++-| ...|+||..+..
T Consensus 134 ~~g~~YfF-----kG~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~-~~~~g~~YfFkg--~~y~~~~~~~~~ 204 (218)
T 1gen_A 134 KNKKTYIF-----AGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVD-LQGGGHSYFFKG--AYYLKLENQSLK 204 (218)
T ss_dssp TTTEEEEE-----ETTEEEEEETTTTEECSSCCEEHHHHSSSCCSSCSEEEE-CTTTCEEEEEET--TEEEEEETTEEE
T ss_pred CCCeEEEE-----ECCEEEEEECccccccCCCCcchhhccCCCCCCCCEEEE-EcCCCcEEEEEC--CEEEEEECCcee
Confidence 37899999 45667889987653111 00001 11111223333 44 89999965 578999987543
No 335
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=36.48 E-value=60 Score=29.24 Aligned_cols=63 Identities=10% Similarity=-0.029 Sum_probs=40.3
Q ss_pred CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEEE-CC-EEEEEeeCCceEEEEEcCCC
Q 016368 299 EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITAA-RG-RVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~-~g-~l~i~g~~~~~v~~~d~~~~ 362 (390)
++++++-++.++.+.+||..+..=. ...........++... ++ .+++.|+.+..|.+||+.+.
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~-~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPI-LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEE-EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred CCCEEEEEECCCeEEEEECCCCcee-eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 7899999999999999998654311 1111111122233333 44 46677677889999998764
No 336
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=34.31 E-value=2.4e+02 Score=24.85 Aligned_cols=129 Identities=9% Similarity=0.064 Sum_probs=0.0
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCccccccEEcccCC-----CCCccccceEEEEECC-----EEEEEcccCCC
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKWEKKAQLK-----DGRFSREAVEAVGFKG-----NLCMVNLKGNG 264 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~~-----~~~~~r~~~~~~~~~g-----~lyv~gg~g~~ 264 (390)
+++||| .+....+.+++ +.. .+.+...+ .... ..++...+ .+|+. .
T Consensus 41 dG~l~V---------~e~~g~I~~i~--~g~----~~~~~~~~v~~~g~~~p----~gia~~pdf~~~g~lYv~-----~ 96 (352)
T 2ism_A 41 DGGMLI---------AERPGRIRLFR--EGR----LSTYAELSVYHRGESGL----LGLALHPRFPQEPYVYAY-----R 96 (352)
T ss_dssp TSCEEE---------EETTTEEEEEE--TTE----EEEEEECCCCCSTTCSE----EEEEECTTTTTSCEEEEE-----E
T ss_pred CCeEEE---------EeCCCeEEEEE--CCC----ccEeecceEeecCCCCc----eeEEECCCCCCCCEEEEE-----E
Q ss_pred C-------ceeEEEeCCCC-------CeEecCCCCCCCCCCceEEEeeCCeEEEEeCCC-------------CcEEEEEC
Q 016368 265 A-------KDGAIYNVELD-------KWKEMPEGMHAGWNGPAASTMNEEELYVVNEGK-------------GRLSKYDA 317 (390)
Q Consensus 265 ~-------~~~~~yd~~~~-------~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg~~-------------~~v~~yd~ 317 (390)
. ..+..|+...+ .+..++...........++...+|.||+..|.. +.|+++|+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~ 176 (352)
T 2ism_A 97 TVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTP 176 (352)
T ss_dssp EECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECT
T ss_pred ecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcC
Q ss_pred CC-------------CceEEcccccccccceeEEEECCEEEEE
Q 016368 318 DH-------------DWWDEVIELAELKGAEKITAARGRVCAV 347 (390)
Q Consensus 318 ~~-------------~~W~~i~~~p~~r~~~~~~~~~g~l~i~ 347 (390)
.. ........--......++..-+|.||+.
T Consensus 177 dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~ 219 (352)
T 2ism_A 177 EGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSS 219 (352)
T ss_dssp TSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEE
T ss_pred CCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEE
No 337
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=34.24 E-value=3.3e+02 Score=26.41 Aligned_cols=107 Identities=9% Similarity=0.096 Sum_probs=49.6
Q ss_pred CCEEEEEcc-cCCCCceeEEEe----CCCCCeEecCC---CCCCCCCC----ceEEEeeCCe-EEEE-eCCCC--cEEEE
Q 016368 252 KGNLCMVNL-KGNGAKDGAIYN----VELDKWKEMPE---GMHAGWNG----PAASTMNEEE-LYVV-NEGKG--RLSKY 315 (390)
Q Consensus 252 ~g~lyv~gg-~g~~~~~~~~yd----~~~~~W~~~~~---~~~~~~~~----~~~~~~~~g~-lyv~-gg~~~--~v~~y 315 (390)
++++++... .+.....+.++| ..++++..+.. ........ .......+|+ |++. ...++ .++.+
T Consensus 263 D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~ 342 (719)
T 1z68_A 263 DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYI 342 (719)
T ss_dssp SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEE
Confidence 666655521 111223466788 76666554431 01112111 0222225665 4443 33333 79999
Q ss_pred ECCCCceEEcccccccccceeEEEECCEEEEEeeC------CceEEEEEc
Q 016368 316 DADHDWWDEVIELAELKGAEKITAARGRVCAVCEN------GERIMVVDV 359 (390)
Q Consensus 316 d~~~~~W~~i~~~p~~r~~~~~~~~~g~l~i~g~~------~~~v~~~d~ 359 (390)
|..+.....+..-...-...... -++.|++.+.. ...++..+.
T Consensus 343 ~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 343 KDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 99887766654311111111112 35556666432 135666665
No 338
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=34.20 E-value=2.6e+02 Score=25.13 Aligned_cols=66 Identities=11% Similarity=-0.032 Sum_probs=38.9
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCCeEec-CC----CC-CCCCCCceEEEeeCCeEEEEeCCCCcEEEEECCCCceEE
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDKWKEM-PE----GM-HAGWNGPAASTMNEEELYVVNEGKGRLSKYDADHDWWDE 324 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~-~~----~~-~~~~~~~~~~~~~~g~lyv~gg~~~~v~~yd~~~~~W~~ 324 (390)
++++|++ -+...+.||..+.+-..- +. .+ ..+..--++....+|++|++-| ...|+||..+.+-..
T Consensus 284 ~~~~yfF-----kG~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg--~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 284 FYRTYFF-----VDNQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG--SNQFEYDFLLQRITK 355 (365)
T ss_dssp TTEEEEE-----ETTEEEEEETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET--TEEEEEETTTTEEEE
T ss_pred CCEEEEE-----ECCEEEEEeCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC--CEEEEEECCccEEec
Confidence 5899999 456678999765532110 00 01 1111122333313899999976 579999998765443
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=33.32 E-value=55 Score=27.57 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=39.7
Q ss_pred eCCeEEEEeCCCCcEEEEECCC---CceEEccccc-c-cccceeEEE--ECCEEEEEeeCCceEEEEEcCCCCCcce
Q 016368 298 NEEELYVVNEGKGRLSKYDADH---DWWDEVIELA-E-LKGAEKITA--ARGRVCAVCENGERIMVVDVLASPARAW 367 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~---~~W~~i~~~p-~-~r~~~~~~~--~~g~l~i~g~~~~~v~~~d~~~~~~~~W 367 (390)
-+|.||.+ .++.+++.++.+ +.|-.....- . .-..+.... .+|.||++ .+ ..++-.+..++....|
T Consensus 50 P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~d-G~iyr~~pP~~~~~~W 122 (236)
T 1tl2_A 50 PGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SK-DKLYKASPPQSDTDNW 122 (236)
T ss_dssp TTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ET-TEEEEESCCCSTTCCH
T ss_pred CCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe-CC-CEEEEeCCCcCCCCce
Confidence 38999999 677999999865 3353332110 0 011133333 37889988 44 5788887755544456
No 340
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=33.01 E-value=3.2e+02 Score=26.77 Aligned_cols=63 Identities=11% Similarity=-0.034 Sum_probs=35.0
Q ss_pred ECCEEEEEcccCCCCceeEEEeCCCCCeE-----ecCCCCCCCCCCceEEEee--CCeEEEEeCCCCcEEEEECCCC
Q 016368 251 FKGNLCMVNLKGNGAKDGAIYNVELDKWK-----EMPEGMHAGWNGPAASTMN--EEELYVVNEGKGRLSKYDADHD 320 (390)
Q Consensus 251 ~~g~lyv~gg~g~~~~~~~~yd~~~~~W~-----~~~~~~~~~~~~~~~~~~~--~g~lyv~gg~~~~v~~yd~~~~ 320 (390)
.++++|++ -+...+.||..+++=. .+...++.-....-++... +|++|++-| ...|+||..+.
T Consensus 547 ~~gktYFF-----kG~~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG--~~Ywr~d~~~~ 616 (631)
T 1ck7_A 547 KNKKTYIF-----AGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG--AYYLKLENQSL 616 (631)
T ss_dssp TTCEEEEE-----ETTEEEEEETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEET--TEEECCBTTBT
T ss_pred CCCeEEEE-----ECCEEEEEcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEEC--CEEEEEeCccc
Confidence 37899999 4567789997654211 1111111101112222213 389999876 46788887654
No 341
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=32.78 E-value=2.8e+02 Score=25.13 Aligned_cols=87 Identities=10% Similarity=0.102 Sum_probs=45.0
Q ss_pred eEEEEECCCCccccccEE-cccCCCCCccccceEEEEECCEEEEEcccCCCCceeEEEeCCCCCeEecCCCCCCCCCCce
Q 016368 215 SMKKWDLKSDREDWKWEK-KAQLKDGRFSREAVEAVGFKGNLCMVNLKGNGAKDGAIYNVELDKWKEMPEGMHAGWNGPA 293 (390)
Q Consensus 215 ~~~~yd~~t~~~~~~W~~-~~~~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~ 293 (390)
.+.+||..+.. -.. ......+. .........+.++. ......++|.++..-..+.. ...+
T Consensus 107 ~l~v~dv~sl~----~~~~~~~~~~~v-----~~i~~~~p~~av~~----~dG~L~v~dl~~~~~~~~~~------~Vs~ 167 (388)
T 1xip_A 107 ALYSLDLEELS----EFRTVTSFEKPV-----FQLKNVNNTLVILN----SVNDLSALDLRTKSTKQLAQ------NVTS 167 (388)
T ss_dssp EEEEEESSSTT----CEEEEEECSSCE-----EEEEECSSEEEEEE----TTSEEEEEETTTCCEEEEEE------SEEE
T ss_pred cEEEEEchhhh----ccCccceeecce-----eeEEecCCCEEEEE----CCCCEEEEEccCCccccccC------CceE
Confidence 78999987765 222 22221111 12222233344442 23445677777655433211 1123
Q ss_pred EEEeeCCeEEEEeCCCCcEEEEECCCCce
Q 016368 294 ASTMNEEELYVVNEGKGRLSKYDADHDWW 322 (390)
Q Consensus 294 ~~~~~~g~lyv~gg~~~~v~~yd~~~~~W 322 (390)
++...+| .++|..++.+..|++.+..-
T Consensus 168 v~WSpkG--~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 168 FDVTNSQ--LAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp EEECSSE--EEEEETTSCEEEEEEETTEE
T ss_pred EEEcCCc--eEEEEcCCcEEEEcCCCccc
Confidence 3332345 56777889999999987764
No 342
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=32.64 E-value=23 Score=21.21 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=15.2
Q ss_pred cccCCCCCCcHHHHHHHHhc
Q 016368 29 TILLLLPGLPNHLADRCLSS 48 (390)
Q Consensus 29 ~~~~~~~~LP~dl~~~iL~r 48 (390)
-++.....||.||-+|||+-
T Consensus 16 VD~eVF~~LP~dIQ~Ells~ 35 (48)
T 2kwv_A 16 VDQEVFKQLPADIQEEILSG 35 (48)
T ss_dssp CCGGGTTTSCHHHHHHHTTC
T ss_pred CCHHHHHHCcHHHHHHHHhc
Confidence 44555667999999999883
No 343
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=32.23 E-value=1.3e+02 Score=27.12 Aligned_cols=62 Identities=6% Similarity=-0.203 Sum_probs=41.4
Q ss_pred CCeEEEEeCCCC----cEEEEECCCCceEEcccccccccceeEEEE--CCEEEEEe---------eCCceEEEEEcCCCC
Q 016368 299 EEELYVVNEGKG----RLSKYDADHDWWDEVIELAELKGAEKITAA--RGRVCAVC---------ENGERIMVVDVLASP 363 (390)
Q Consensus 299 ~g~lyv~gg~~~----~v~~yd~~~~~W~~i~~~p~~r~~~~~~~~--~g~l~i~g---------~~~~~v~~~d~~~~~ 363 (390)
..++||.....+ .+.++|.++ ++.+..++..... +++.. +.++|+.. ..++.|.++|+.+..
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t--~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGC--GVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTT--TEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCeEEEECCccCCccceEEEEECCC--CeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 466777776555 788898775 5666666655444 44443 55788874 235689999998864
No 344
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=30.95 E-value=2.9e+02 Score=24.62 Aligned_cols=194 Identities=12% Similarity=0.091 Sum_probs=95.7
Q ss_pred CeEEEEEeecCCCCCCCCCcEEEeCCCCceecCCCC---CC--------------CCcceEEEEE---CCEEEEEeccCC
Q 016368 147 NNLVLIAATTPHFLPALASPLAFNPQSNTWFFGPQL---SI--------------PRRWCAMGSV---GGVVYVASGVGA 206 (390)
Q Consensus 147 ~~l~~~gG~~~~~~~~~~~~~~~dp~t~~W~~~~~~---~~--------------~r~~~~~~~~---~~~lyv~GG~~~ 206 (390)
.+.+++++. ...+++.+-...+|+.+... +. ....+++++. .+.||+....
T Consensus 128 ~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-- 198 (394)
T 3b7f_A 128 PGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-- 198 (394)
T ss_dssp TTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET--
T ss_pred CCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC--
Confidence 455555543 13577877778899887432 11 1112333332 3567775432
Q ss_pred CCCCCccCeEEEEECCCCccccccEEcccC------CCCC--ccccceEEEEEC---CEEEEEcccCCCCceeEEEeCCC
Q 016368 207 HYRGDVARSMKKWDLKSDREDWKWEKKAQL------KDGR--FSREAVEAVGFK---GNLCMVNLKGNGAKDGAIYNVEL 275 (390)
Q Consensus 207 ~~~~~~~~~~~~yd~~t~~~~~~W~~~~~~------~~~~--~~r~~~~~~~~~---g~lyv~gg~g~~~~~~~~yd~~~ 275 (390)
..+++.+-...+ |+.+... |... .....+.++... +.+|+.. ...+.+.+-..
T Consensus 199 -------ggl~~s~DgG~t----W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~-----~~gl~~s~D~G 262 (394)
T 3b7f_A 199 -------GGVFESTDAGTD----WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN-----HCGIYRMDRRE 262 (394)
T ss_dssp -------BEEEEESSTTSS----CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-----TTEEEEEETTT
T ss_pred -------CCEEEECCCCCC----ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-----CCeEEEeCCCC
Confidence 135566666677 9987532 1100 000123344332 5677752 23355667677
Q ss_pred CCeEecCCCCCCC--CCCceEEEe--eCCeEEEEeC------------CCCcEEEEECCCCceEEccc-cccccc-----
Q 016368 276 DKWKEMPEGMHAG--WNGPAASTM--NEEELYVVNE------------GKGRLSKYDADHDWWDEVIE-LAELKG----- 333 (390)
Q Consensus 276 ~~W~~~~~~~~~~--~~~~~~~~~--~~g~lyv~gg------------~~~~v~~yd~~~~~W~~i~~-~p~~r~----- 333 (390)
.+|+.+...++.. .....+++. -.+.||+... ....+++-.-...+|+.+.. +|....
T Consensus 263 ~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~ 342 (394)
T 3b7f_A 263 GVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVK 342 (394)
T ss_dssp TEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCC
T ss_pred CcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEE
Confidence 8999886423321 122233321 2467887641 11244443333468998863 443211
Q ss_pred ceeEEEE--C-CEEEEEeeCCceEEEEEcCCCCCcceEe
Q 016368 334 AEKITAA--R-GRVCAVCENGERIMVVDVLASPARAWLV 369 (390)
Q Consensus 334 ~~~~~~~--~-g~l~i~g~~~~~v~~~d~~~~~~~~W~~ 369 (390)
...+++. + +.||+. .....++.-+-. ++.|+.
T Consensus 343 ~~~~~~~p~~~~~l~~g-~~~g~l~~S~D~---G~tW~~ 377 (394)
T 3b7f_A 343 RQAMTADAHAPVGVYFG-TTGGEIWASADE---GEHWQC 377 (394)
T ss_dssp TBSEEECCSSSCCEEEE-CTTSCEEEESST---TSBCEE
T ss_pred EEEEEECCCCCCEEEEE-eCCCeEEEECCC---CCCceE
Confidence 1234332 2 457764 334456544433 347984
No 345
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=30.24 E-value=4e+02 Score=26.14 Aligned_cols=68 Identities=15% Similarity=0.020 Sum_probs=33.6
Q ss_pred CCcEEEeCCCCceecCCCCC-CCCcc--e--EEEEECCEEEEEeccC-CCCCCCccCeEEEEECCCCccccccEEccc
Q 016368 164 ASPLAFNPQSNTWFFGPQLS-IPRRW--C--AMGSVGGVVYVASGVG-AHYRGDVARSMKKWDLKSDREDWKWEKKAQ 235 (390)
Q Consensus 164 ~~~~~~dp~t~~W~~~~~~~-~~r~~--~--~~~~~~~~lyv~GG~~-~~~~~~~~~~~~~yd~~t~~~~~~W~~~~~ 235 (390)
..+++||+.+++-..+-... ..... . -...-+++..+++... ..........+++||..++. -+.+..
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~----~~~l~~ 109 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ----LITEER 109 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE----ECCSSC
T ss_pred CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc----EEEccc
Confidence 47889999988754331111 11111 1 1112255544444332 11111233578899999987 555543
No 346
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=29.87 E-value=5.3e+02 Score=27.37 Aligned_cols=146 Identities=7% Similarity=0.036 Sum_probs=75.9
Q ss_pred eEEEEEeecCC---CCCCCCCcEEEeCCCCceecCCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEEEEECCCC
Q 016368 148 NLVLIAATTPH---FLPALASPLAFNPQSNTWFFGPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMKKWDLKSD 224 (390)
Q Consensus 148 ~l~~~gG~~~~---~~~~~~~~~~~dp~t~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~ 224 (390)
..+++|-.... .......+++|+...++.+.+......-.-.+++.++|+|.+.-| +.+.+|+...+
T Consensus 845 ~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig----------~~l~vy~l~~~ 914 (1158)
T 3ei3_A 845 TYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN----------STVRLYEWTTE 914 (1158)
T ss_dssp CEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET----------TEEEEEEECTT
T ss_pred EEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC----------CEEEEEECCCC
Confidence 45556554321 112445688888875555555433333334566777887666433 36788888766
Q ss_pred ccccccEEccc--CCCCCccccceEEEEECCEEEEEcccCCCCc-e--eEEEeCCCCCeEecCCCCCCCCCCceEEEeeC
Q 016368 225 REDWKWEKKAQ--LKDGRFSREAVEAVGFKGNLCMVNLKGNGAK-D--GAIYNVELDKWKEMPEGMHAGWNGPAASTMNE 299 (390)
Q Consensus 225 ~~~~~W~~~~~--~~~~~~~r~~~~~~~~~g~lyv~gg~g~~~~-~--~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 299 (390)
. .-.... .+. .. .......++.+++- +.. . ...|+...++-..+.... .++...++.. ++
T Consensus 915 ~----~L~~~~~~~~~-i~---~~~l~~~~~~I~vg-----D~~~Sv~~~~y~~~~~~L~~~a~D~-~~~~vta~~~-ld 979 (1158)
T 3ei3_A 915 K----ELRTECNHYNN-IM---ALYLKTKGDFILVG-----DLMRSVLLLAYKPMEGNFEEIARDF-NPNWMSAVEI-LD 979 (1158)
T ss_dssp S----CEEEEEEECCC-SC---EEEEEEETTEEEEE-----ESSBCEEEEEEETTTTEEEEEEECC-SCBCEEEEEE-EE
T ss_pred c----eEEEEeecccc-EE---EEEEeccCCEEEEE-----EhhheEEEEEEEcCCCeEEEEEeec-ccccEEEEEE-Ec
Confidence 5 222111 111 00 12333456666554 322 2 347899888888887633 3333333333 44
Q ss_pred CeEEEEeCCCC--cEEEEECC
Q 016368 300 EELYVVNEGKG--RLSKYDAD 318 (390)
Q Consensus 300 g~lyv~gg~~~--~v~~yd~~ 318 (390)
+.-++.+...+ .+.+|+++
T Consensus 980 ~~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 980 DDNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp TTEEEEEETTSEEEEEEECTT
T ss_pred cCcEEEEcCCCcEEEEecCCC
Confidence 43344444445 45566664
No 347
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=29.64 E-value=3.4e+02 Score=25.11 Aligned_cols=125 Identities=7% Similarity=-0.008 Sum_probs=68.1
Q ss_pred Cceec--CCCCCCCCcceEEEEECCEEEEEeccCCCCCCCccCeEE-EEECC-----CCccccccEEcccCCCCCccccc
Q 016368 174 NTWFF--GPQLSIPRRWCAMGSVGGVVYVASGVGAHYRGDVARSMK-KWDLK-----SDREDWKWEKKAQLKDGRFSREA 245 (390)
Q Consensus 174 ~~W~~--~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~-~yd~~-----t~~~~~~W~~~~~~~~~~~~r~~ 245 (390)
..|+. ++-.+..-.-|+.+.+++.=|++|-..+. ...+.+- .|-+. .... =+.+++--.+-.. .
T Consensus 270 spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGD---v~PRe~G~~yfs~~~~sp~~~v---rr~i~sey~~~As--E 341 (670)
T 3ju4_A 270 SPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGD---VAPREVGLFYFPDAFNSPSNYV---RRQIPSEYEPDAS--E 341 (670)
T ss_dssp SCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECS---SSSCEEEEEEETTTTTCTTCCE---EEECCGGGCTTEE--E
T ss_pred CCceecccccccceeeeeeeeEecCCceEEEeccCC---CCcceeeEEEecccccCCccee---eeechhhhccccc--c
Confidence 45643 55556556778999998888888866542 2223332 22221 1110 1233332111110 2
Q ss_pred eEEEEECCEEEEEccc--C-CCCceeEEEeCCCCCeEecCCCCCCCCCCceEEEeeCCeEEEEeC
Q 016368 246 VEAVGFKGNLCMVNLK--G-NGAKDGAIYNVELDKWKEMPEGMHAGWNGPAASTMNEEELYVVNE 307 (390)
Q Consensus 246 ~~~~~~~g~lyv~gg~--g-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~g~lyv~gg 307 (390)
.++-.++|++|+..-. + .-+.....-+.....|+.+.-+-.........+- .++.||+||.
T Consensus 342 PCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFak-vgD~l~mFgs 405 (670)
T 3ju4_A 342 PCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAK-VGDDLIMFGS 405 (670)
T ss_dssp EEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEE-ETTEEEEEEE
T ss_pred chhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcce-eCCEEEEEec
Confidence 4455689999998422 1 1233445666667789987542223333444444 8999999996
No 348
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=29.29 E-value=1.6e+02 Score=28.66 Aligned_cols=65 Identities=6% Similarity=0.017 Sum_probs=44.5
Q ss_pred eeCCeEEEEeCCCCcEEEEECCCCceEEcc-cccc-cccceeEEEE-CCEEEEEeeCCceEEEEEcCCC
Q 016368 297 MNEEELYVVNEGKGRLSKYDADHDWWDEVI-ELAE-LKGAEKITAA-RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 297 ~~~g~lyv~gg~~~~v~~yd~~~~~W~~i~-~~p~-~r~~~~~~~~-~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
..+|+....++.++.+..||.++ .+..+. ..+. .+..++++.. +|+....|+.++.|-+||+.+.
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 57899999999999999999654 344433 1111 1223444433 7887777788889999998876
No 349
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=25.29 E-value=2.8e+02 Score=22.73 Aligned_cols=102 Identities=10% Similarity=0.188 Sum_probs=52.4
Q ss_pred CCEEEEEcccCCCCceeEEEeCCCCC--e-EecCC-CCCCCCCCceEEE--eeCCeEEEEeCCCCcEEEEECCCCceEE-
Q 016368 252 KGNLCMVNLKGNGAKDGAIYNVELDK--W-KEMPE-GMHAGWNGPAAST--MNEEELYVVNEGKGRLSKYDADHDWWDE- 324 (390)
Q Consensus 252 ~g~lyv~gg~g~~~~~~~~yd~~~~~--W-~~~~~-~~~~~~~~~~~~~--~~~g~lyv~gg~~~~v~~yd~~~~~W~~- 324 (390)
++++|++ -+...++||..+.. + +.+.. .+|......-++. ..+|++|++-| +..|+||..+++-..
T Consensus 87 ~~k~yfF-----kG~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--~~ywr~d~~~~~v~~g 159 (218)
T 1gen_A 87 EEKAVFF-----AGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--DKFWRYNEVKKKMDPG 159 (218)
T ss_dssp TTEEEEE-----ETTEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--TEEEEEETTTTEECSS
T ss_pred CCEEEEE-----eCCEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--CEEEEEECccccccCC
Confidence 6899999 45667888852110 0 01111 1111111122232 13799999976 579999987653211
Q ss_pred ----ccc-cc-ccccceeEEEE--CCEEEEEeeCCceEEEEEcCCC
Q 016368 325 ----VIE-LA-ELKGAEKITAA--RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 325 ----i~~-~p-~~r~~~~~~~~--~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
+.. -+ .+....++... +|.+|++ . +...+.+|..+.
T Consensus 160 yPr~i~~~w~g~p~~idaAf~~~~~g~~YfF-k-g~~y~~~~~~~~ 203 (218)
T 1gen_A 160 FPKLIADAWNAIPDNLDAVVDLQGGGHSYFF-K-GAYYLKLENQSL 203 (218)
T ss_dssp CCEEHHHHSSSCCSSCSEEEECTTTCEEEEE-E-TTEEEEEETTEE
T ss_pred CCcchhhccCCCCCCCCEEEEEcCCCcEEEE-E-CCEEEEEECCce
Confidence 110 00 11112233333 4899998 3 346777776543
No 350
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=24.88 E-value=1.3e+02 Score=26.98 Aligned_cols=65 Identities=3% Similarity=-0.146 Sum_probs=41.4
Q ss_pred eCCeEEEEeCCCCcEEEEECCCCceE---EcccccccccceeEEEE----------CCEEEEEeeCCceEEEEEcCCC
Q 016368 298 NEEELYVVNEGKGRLSKYDADHDWWD---EVIELAELKGAEKITAA----------RGRVCAVCENGERIMVVDVLAS 362 (390)
Q Consensus 298 ~~g~lyv~gg~~~~v~~yd~~~~~W~---~i~~~p~~r~~~~~~~~----------~g~l~i~g~~~~~v~~~d~~~~ 362 (390)
.++.+.+.++.++.+..||..+..-. .+..+..+......+.+ ++++++-|+.+..+.+||+.+.
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 45566677778888888888765432 23333333332222222 5678887788889999998764
No 351
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=24.52 E-value=88 Score=28.00 Aligned_cols=67 Identities=10% Similarity=0.081 Sum_probs=35.3
Q ss_pred EEEEeCCCCcEEEEECCCC--ceEEccc--ccccccceeEEEECCEEEEEe-eCCceEEEEEcCCCCCcceEe
Q 016368 302 LYVVNEGKGRLSKYDADHD--WWDEVIE--LAELKGAEKITAARGRVCAVC-ENGERIMVVDVLASPARAWLV 369 (390)
Q Consensus 302 lyv~gg~~~~v~~yd~~~~--~W~~i~~--~p~~r~~~~~~~~~g~l~i~g-~~~~~v~~~d~~~~~~~~W~~ 369 (390)
+.+++..++.++.+|.++. .|+.-.. .|...........++.++++. ..+..++.+|..+. ..+|..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G-~~~~~~ 83 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG-LQKLPL 83 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE-EEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC-cEEeee
Confidence 3345556778888887665 3775443 111110000011355677774 35668888887654 234553
No 352
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=23.56 E-value=1.4e+02 Score=29.07 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=49.4
Q ss_pred CCeEEEEeCCCCcEEEEECCCCceEEcccccccccceeEEE----ECCEEEEEee-----------------CCceEEEE
Q 016368 299 EEELYVVNEGKGRLSKYDADHDWWDEVIELAELKGAEKITA----ARGRVCAVCE-----------------NGERIMVV 357 (390)
Q Consensus 299 ~g~lyv~gg~~~~v~~yd~~~~~W~~i~~~p~~r~~~~~~~----~~g~l~i~g~-----------------~~~~v~~~ 357 (390)
+..+|+-...+..+.+.|..+.+=.++-++|.....++++. -++.||+-+. ..+.+.++
T Consensus 101 G~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 101 GRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 45677766666789999999988777667877667778775 2566777641 12378899
Q ss_pred EcCCCCCcceEec
Q 016368 358 DVLASPARAWLVD 370 (390)
Q Consensus 358 d~~~~~~~~W~~~ 370 (390)
|..+... .|++.
T Consensus 181 D~~t~~v-~~qI~ 192 (595)
T 1fwx_A 181 DADKWEV-AWQVL 192 (595)
T ss_dssp ETTTTEE-EEEEE
T ss_pred ECCCCeE-EEEEE
Confidence 9887522 47754
No 353
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=21.59 E-value=4.1e+02 Score=23.31 Aligned_cols=28 Identities=11% Similarity=0.135 Sum_probs=20.1
Q ss_pred ceEEEeeCCeEEEEeCCC-------------CcEEEEECCC
Q 016368 292 PAASTMNEEELYVVNEGK-------------GRLSKYDADH 319 (390)
Q Consensus 292 ~~~~~~~~g~lyv~gg~~-------------~~v~~yd~~~ 319 (390)
..++...+|.||+.-|.. +.|+++|+..
T Consensus 133 ~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 133 GRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp CCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred ccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 345544689999987642 4799999875
No 354
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=21.56 E-value=4.4e+02 Score=23.58 Aligned_cols=64 Identities=8% Similarity=-0.035 Sum_probs=36.9
Q ss_pred CCEEEEEeccCCCCCCCccCeEEEEECCCCcccccc-EEc----ccCCCCCccccceEEEEE-CCEEEEEcccCCCCcee
Q 016368 195 GGVVYVASGVGAHYRGDVARSMKKWDLKSDREDWKW-EKK----AQLKDGRFSREAVEAVGF-KGNLCMVNLKGNGAKDG 268 (390)
Q Consensus 195 ~~~lyv~GG~~~~~~~~~~~~~~~yd~~t~~~~~~W-~~~----~~~~~~~~~r~~~~~~~~-~g~lyv~gg~g~~~~~~ 268 (390)
++++|+|-|. ..++||..++..+... +.+ +.++.. .-++... +|++|++ -+...
T Consensus 284 ~~~~yfFkG~----------~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~-----iDaA~~~~~g~~YfF-----kg~~y 343 (365)
T 3ba0_A 284 FYRTYFFVDN----------QYWRYDERRQMMDPGYPKLITKNFQGIGPK-----IDAVFYSKNKYYYFF-----QGSNQ 343 (365)
T ss_dssp TTEEEEEETT----------EEEEEETTTTEECSSCCCCHHHHSTTCCSS-----CSEEEEETTTEEEEE-----ETTEE
T ss_pred CCEEEEEECC----------EEEEEeCCcceecCCCCcchhhcCCCCCCc-----cceeeEecCCcEEEE-----eCCEE
Confidence 5899999653 6688887665410000 001 112211 1334445 8999999 45677
Q ss_pred EEEeCCCCCe
Q 016368 269 AIYNVELDKW 278 (390)
Q Consensus 269 ~~yd~~~~~W 278 (390)
+.||..+.+-
T Consensus 344 wr~d~~~~~v 353 (365)
T 3ba0_A 344 FEYDFLLQRI 353 (365)
T ss_dssp EEEETTTTEE
T ss_pred EEEECCccEE
Confidence 8899877653
No 355
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=21.45 E-value=4.4e+02 Score=23.58 Aligned_cols=147 Identities=10% Similarity=0.035 Sum_probs=74.4
Q ss_pred CCCcEEE--eCCCCceecCCCC--C--CC-CcceEEEEE----CCEEEEEeccCCCCCCCccCeEEEEEC---CCCcccc
Q 016368 163 LASPLAF--NPQSNTWFFGPQL--S--IP-RRWCAMGSV----GGVVYVASGVGAHYRGDVARSMKKWDL---KSDREDW 228 (390)
Q Consensus 163 ~~~~~~~--dp~t~~W~~~~~~--~--~~-r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~~yd~---~t~~~~~ 228 (390)
.+.+.+| ||.+++++.+... | .. +.-++++.+ .+++|++-...+ ..++.|+. .....
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-------G~~~q~~l~~~~~g~~-- 168 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-------GEFEQYELKADKNGYI-- 168 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-------SEEEEEEEEECTTSCE--
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-------CeEEEEEEEeCCCCcc--
Confidence 3667777 8899999988653 3 33 555556654 356666654332 25566655 33320
Q ss_pred ccEEcccCCCCCccccceEEEEE--CCEEEEEcccCCCCceeEEEeCC--CC-CeEecCCCCCCCC---CCceEEE--ee
Q 016368 229 KWEKKAQLKDGRFSREAVEAVGF--KGNLCMVNLKGNGAKDGAIYNVE--LD-KWKEMPEGMHAGW---NGPAAST--MN 298 (390)
Q Consensus 229 ~W~~~~~~~~~~~~r~~~~~~~~--~g~lyv~gg~g~~~~~~~~yd~~--~~-~W~~~~~~~~~~~---~~~~~~~--~~ 298 (390)
.=+.+..++.+.. .-++++- .+.||+- . ....++.||.+ +. +-+.+.. ...+. -..+++. ..
T Consensus 169 ~~~lVR~f~lgsq---~EgcvvDd~~g~Lyv~---e-Ed~GIw~~da~p~~~~~~~~v~~-~~~g~l~aDvEGLai~~~~ 240 (355)
T 3amr_A 169 SGKKVRAFKMNSQ---TEGMAADDEYGRLYIA---E-EDEAIWKFSAEPDGGSNGTVIDR-ADGRHLTRDIEGLTIYYAA 240 (355)
T ss_dssp EEEEEEEEECSSC---EEEEEEETTTTEEEEE---E-TTTEEEEEECSTTSCSCCEEEEE-BSSSSBCSCEEEEEEEECG
T ss_pred cceEEEEecCCCC---cceEEEcCCCCeEEEe---c-ccceEEEEeCCcCCCCCceEEEE-ecCCccccCcceEEEEecC
Confidence 0123333332222 1333333 4789986 2 23457899954 31 2333322 21121 1233332 11
Q ss_pred C--CeEEEEeCCCCcEEEEECCCCceEEccc
Q 016368 299 E--EELYVVNEGKGRLSKYDADHDWWDEVIE 327 (390)
Q Consensus 299 ~--g~lyv~gg~~~~v~~yd~~~~~W~~i~~ 327 (390)
+ |.|++..-.++.+.+||.+ ..++.+..
T Consensus 241 ~g~gyLivSsQG~~s~~Vydr~-~~~~~vg~ 270 (355)
T 3amr_A 241 DGKGYLMASSQGNSSYAIYDRQ-GKNKYVAD 270 (355)
T ss_dssp GGCEEEEEEEGGGTEEEEEESS-TTCCEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEECC-CCCcEEEE
Confidence 2 3566665456689999986 23444443
Done!