Your job contains 1 sequence.
>016370
MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE
PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ
LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL
WDLLESTLTYQHRTYAEAIKQAVAKPVASS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016370
(390 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2200018 - symbol:AXS2 "UDP-D-apiose/UDP-D-xylo... 1897 7.0e-196 1
TAIR|locus:2041974 - symbol:AXS1 "UDP-D-apiose/UDP-D-xylo... 1882 2.7e-194 1
UNIPROTKB|P77398 - symbol:arnA "fused UDP-L-Ara4N formylt... 471 9.1e-45 1
UNIPROTKB|Q4KC82 - symbol:arnA "Bifunctional polymyxin re... 382 1.1e-34 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 224 1.3e-25 2
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 162 4.0e-17 2
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 128 2.6e-14 2
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 128 4.1e-14 2
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 128 4.3e-14 2
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 128 4.3e-14 2
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 128 4.3e-14 2
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 128 4.3e-14 2
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 127 4.6e-14 2
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 127 5.5e-14 2
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 127 7.1e-14 2
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 127 2.0e-12 2
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 117 2.3e-11 2
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 129 6.5e-11 2
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 116 2.2e-10 2
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 113 3.5e-10 2
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 147 5.6e-10 2
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 120 6.5e-10 2
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 153 1.1e-09 2
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 112 1.6e-09 2
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 148 1.7e-09 2
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 114 1.9e-09 2
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 107 2.5e-09 2
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 112 3.1e-09 2
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 102 7.5e-09 2
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 118 1.7e-08 2
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 112 2.2e-08 2
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 100 2.8e-08 3
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 105 4.1e-08 2
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 111 5.3e-08 2
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 100 7.6e-08 2
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 120 9.8e-08 2
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 111 1.3e-07 2
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 111 1.3e-07 2
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 118 5.4e-07 2
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 110 1.5e-06 2
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 126 1.5e-06 2
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 101 1.8e-06 2
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 127 2.8e-06 1
UNIPROTKB|Q83AP4 - symbol:CBU_1837 "UDP-glucose 4-epimera... 102 4.6e-06 2
TIGR_CMR|CBU_1837 - symbol:CBU_1837 "NAD-dependent epimer... 102 4.6e-06 2
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 133 5.9e-06 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 88 9.0e-06 2
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 101 9.4e-06 2
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 91 2.7e-05 2
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 106 5.1e-05 2
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 95 7.9e-05 2
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 122 0.00010 1
TAIR|locus:2051008 - symbol:CRL1 "CCR(Cinnamoyl coA:NADP ... 107 0.00011 2
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 123 0.00012 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 98 0.00016 2
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 83 0.00022 2
UNIPROTKB|P32055 - symbol:fcl "Fcl" species:83333 "Escher... 118 0.00026 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 85 0.00034 2
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 85 0.00034 2
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 93 0.00037 2
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 82 0.00041 2
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 89 0.00043 2
TAIR|locus:2165427 - symbol:DFR "dihydroflavonol 4-reduct... 117 0.00046 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 108 0.00046 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 88 0.00050 2
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 98 0.00065 2
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 98 0.00065 2
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 108 0.00073 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 97 0.00078 2
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 1897 (672.8 bits), Expect = 7.0e-196, P = 7.0e-196
Identities = 354/389 (91%), Positives = 373/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 1882 (667.6 bits), Expect = 2.7e-194, P = 2.7e-194
Identities = 349/389 (89%), Positives = 372/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + R+DLDG+PI+P+TICMIGAGGFIGSHLCEK+L ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGANRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ + RIQFHR+NIKHDSRLEGL+KMADL INLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVEWSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLR DPA+YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTF+YI DAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEA+K+A +KPVAS
Sbjct: 361 WDLLESTLTYQHRTYAEAVKKATSKPVAS 389
>UNIPROTKB|P77398 [details] [associations]
symbol:arnA "fused UDP-L-Ara4N formyltransferase and
UDP-GlcA C-4''-decarboxylase" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008168 "methyltransferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0046677
"response to antibiotic" evidence=IEA;IDA] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=IEA;IDA] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IDA]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR SUPFAM:SSF50486 GO:GO:0046677 GO:GO:0009245
GO:GO:0016616 GO:GO:0016742 GO:GO:0008168 Gene3D:3.10.25.10
Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103 EMBL:AY057445
PIR:E64996 RefSeq:NP_416758.1 RefSeq:YP_490494.1 PDB:1U9J PDB:1YRW
PDB:1Z73 PDB:1Z74 PDB:1Z75 PDB:1Z7B PDB:1Z7E PDB:2BLL PDB:2BLN
PDBsum:1U9J PDBsum:1YRW PDBsum:1Z73 PDBsum:1Z74 PDBsum:1Z75
PDBsum:1Z7B PDBsum:1Z7E PDBsum:2BLL PDBsum:2BLN
ProteinModelPortal:P77398 SMR:P77398 DIP:DIP-11961N IntAct:P77398
MINT:MINT-1257581 PaxDb:P77398 PRIDE:P77398
EnsemblBacteria:EBESCT00000003653 EnsemblBacteria:EBESCT00000017866
GeneID:12931503 GeneID:947683 KEGG:ecj:Y75_p2218 KEGG:eco:b2255
PATRIC:32119875 EchoBASE:EB3844 EcoGene:EG14091
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
BioCyc:EcoCyc:G7168-MONOMER BioCyc:ECOL316407:JW2249-MONOMER
BioCyc:MetaCyc:G7168-MONOMER SABIO-RK:P77398
EvolutionaryTrace:P77398 Genevestigator:P77398 Uniprot:P77398
Length = 660
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 107/300 (35%), Positives = 162/300 (54%)
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D Y+ ED S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------MCSDK-------YF--DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 477 YGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 534 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH 593
Query: 318 LEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V S +YG+GY D + R P + ++ L W PK + + ++ TL + RT
Sbjct: 594 FP-PFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 652
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 43/136 (31%), Positives = 69/136 (50%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHP------HFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKD 154
T EVYG + +D
Sbjct: 432 TSEVYGMCSDKYFDED 447
>UNIPROTKB|Q4KC82 [details] [associations]
symbol:arnA "Bifunctional polymyxin resistance protein
ArnA" species:220664 "Pseudomonas protegens Pf-5" [GO:0009245
"lipid A biosynthetic process" evidence=ISS] [GO:0016742
"hydroxymethyl-, formyl- and related transferase activity"
evidence=ISS] [GO:0016831 "carboxy-lyase activity" evidence=ISS]
[GO:0046398 "UDP-glucuronate metabolic process" evidence=ISS]
[GO:0046677 "response to antibiotic" evidence=ISS]
UniPathway:UPA00032 HAMAP:MF_01166 InterPro:IPR001509
InterPro:IPR002376 InterPro:IPR005793 InterPro:IPR011034
InterPro:IPR021168 Pfam:PF00551 Pfam:PF01370 Pfam:PF02911
PIRSF:PIRSF036506 UniPathway:UPA00030 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
SUPFAM:SSF50486 GO:GO:0016491 GO:GO:0046677 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0009245 GO:GO:0016742 GO:GO:0008168
Gene3D:3.10.25.10 Gene3D:3.40.50.170 SUPFAM:SSF53328 GO:GO:0009103
HOGENOM:HOG000247761 KO:K10011 OMA:VRYCVKY ProtClustDB:PRK08125
RefSeq:YP_260151.1 ProteinModelPortal:Q4KC82 SMR:Q4KC82
STRING:Q4KC82 GeneID:3475938 KEGG:pfl:PFL_3045 PATRIC:19875401
BioCyc:PFLU220664:GIX8-3059-MONOMER GO:GO:0016831 GO:GO:0046398
Uniprot:Q4KC82
Length = 668
Score = 382 (139.5 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 116/380 (30%), Positives = 183/380 (48%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
G+ +R GR + + ++G GFIG+HL E++L + + + LD+ +D I+ L
Sbjct: 304 GSLLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDKYDVYGLDIGSDAIERL---R 360
Query: 63 SQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
S ++ ++I H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 361 SHPNFHFVEGD-ISI-HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLK 418
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+V+YC + NKR+I ST EVYG + QD + ED S I G I KQR
Sbjct: 419 LVRYCVKYNKRVIFPSTSEVYG------------MCQDKNF---DEDTSNLIVGPINKQR 463
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID-GPSEGVPRVLA--- 238
W Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D + G S + +++
Sbjct: 464 WIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILNLV 522
Query: 239 ------CFSNNLLRRQPLKLVDGGQSQRTFIYIK-DAIEAVLLMIENPARANGHIFNVGN 291
F +R + DG ++ + + D ++ I NP I +G
Sbjct: 523 EGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDCCNGQIINIGNPDN-EASIRQLG- 580
Query: 292 PHNEVTVRQL-AEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQ 350
E +RQ A + + +G DV SK FYG GY D + R P + +
Sbjct: 581 ---EELLRQFEAHPLRGNFPPFAGFR-------DVESKAFYGAGYQDVEHRKPSIDNAKR 630
Query: 351 QLGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 631 LLNWEPTVEMSETIGNTLDF 650
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 224 (83.9 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 64/198 (32%), Positives = 102/198 (51%)
Query: 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233
++G+ K RWSYA K L E L E GL TIVR FN GPR DGP GV
Sbjct: 137 LYGATSKIRWSYAICKTLEETLCLGYALE-GLPVTIVRYFNIYGPRAK-----DGPYAGV 190
Query: 234 -PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP 292
PR F + L+ + + + G+ R F Y+ DA+EA + ++ + NG I N+G+
Sbjct: 191 IPR----FISAALQGEDILVYGDGEQTRCFTYVSDAVEATIRAMDE--KVNGEIINIGS- 243
Query: 293 HNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL 352
NE +++++AE V K++ ++ V V +E Y G+++ R PD+T + +
Sbjct: 244 ENEKSIKEVAE----VIKKLTDSSS---KIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLV 296
Query: 353 GWNPKTSLWDLLESTLTY 370
+ K + D L+ T+ +
Sbjct: 297 QFQAKVTWEDGLKETIKW 314
Score = 112 (44.5 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 35/127 (27%), Positives = 63/127 (49%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
C+I G GFIGSHL E+ L+ + + +D Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEE-LVGRGYNVTIVDNFYKGKNKYHDELMKE-----IRVIPISVL 58
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ S
Sbjct: 59 DKNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAS 118
Query: 139 TCEVYGK 145
T EVYGK
Sbjct: 119 TSEVYGK 125
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 162 (62.1 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 44/127 (34%), Positives = 64/127 (50%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ-FHRLN-I 77
I + G GFIGSHLCE+ LLE H +L LD + S+ DR+ FHR I
Sbjct: 3 ILVTGGAGFIGSHLCER-LLEQGHDVLCLDNFFTG--------SKRNIDRLMDFHRFEVI 53
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD +E ++ D NLA +P Y P+ TI ++ + + ++ R++
Sbjct: 54 RHDI-IEPILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQA 112
Query: 138 STCEVYG 144
ST EVYG
Sbjct: 113 STSEVYG 119
Score = 112 (44.5 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 39/145 (26%), Positives = 66/145 (45%)
Query: 228 GP--SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGH 285
GP +E RV++ F LR + L + G R+F Y+ D ++ ++ ++E+ G
Sbjct: 175 GPRMAEHDGRVVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFC-GP 233
Query: 286 IFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 345
+ N+GNP E + + A + + S + P DD +R PD+
Sbjct: 234 V-NLGNPE-ETPIIEFARRIIAMTG--SSSQIIYRPLPS-----------DDPRQRQPDI 278
Query: 346 TIINQQLGWNPKTSLWDLLESTLTY 370
T+ LGW P+ SL + L T+ Y
Sbjct: 279 TLARTILGWEPRVSLDEGLAKTIEY 303
Score = 110 (43.8 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
R Y K++ E L+ +NG++ I R FN GPRM +E RV++ F
Sbjct: 140 RSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGPRM---------AEHDGRVVSNFV 190
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQL 301
LR + L + G R+F Y+ D ++ ++ ++E+ G + N+GNP E + +
Sbjct: 191 VQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFC-GPV-NLGNPE-ETPIIEF 247
Query: 302 A 302
A
Sbjct: 248 A 248
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 128 (50.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 134 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 189
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 190 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 240
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 241 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 296
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 297 AQDDPQKRK 305
Score = 127 (49.8 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 86
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 87 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 145
Query: 140 CEVYG 144
EVYG
Sbjct: 146 SEVYG 150
Score = 84 (34.6 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + SG S +F E DD KR PD+
Sbjct: 265 NLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKK 310
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
LGW P L + L + Y + +A Q + KP
Sbjct: 311 AKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 350
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 128 (50.1 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 185 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 240
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 241 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 291
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 292 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 347
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 348 AQDDPQKRK 356
Score = 127 (49.8 bits), Expect = 4.1e-14, Sum P(2) = 4.1e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 85 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 137
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 138 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 196
Query: 140 CEVYG 144
EVYG
Sbjct: 197 SEVYG 201
Score = 80 (33.2 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 28/100 (28%), Positives = 42/100 (42%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + SG S +F E DD KR PD+
Sbjct: 316 NLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIRK 361
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
L W P L + L + Y + +A Q + KP
Sbjct: 362 AKMMLAWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 401
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 128 (50.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 246
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 247 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 297
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 353
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 354 AQDDPQKRK 362
Score = 127 (49.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 143
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 144 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 202
Query: 140 CEVYG 144
EVYG
Sbjct: 203 SEVYG 207
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + SG S +F E DD KR PD+
Sbjct: 322 NLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKK 367
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
LGW P L + L + Y + +A Q + KP
Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 407
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 128 (50.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 246
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 247 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 297
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 353
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 354 AQDDPQKRK 362
Score = 127 (49.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 143
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 144 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 202
Query: 140 CEVYG 144
EVYG
Sbjct: 203 SEVYG 207
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + SG S +F E DD KR PD+
Sbjct: 322 NLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKK 367
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
LGW P L + L + Y + +A Q + KP
Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 407
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 128 (50.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 246
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 247 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 297
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 353
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 354 AQDDPQKRK 362
Score = 127 (49.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 143
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 144 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 202
Query: 140 CEVYG 144
EVYG
Sbjct: 203 SEVYG 207
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + SG S +F E DD KR PD+
Sbjct: 322 NLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKK 367
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
LGW P L + L + Y + +A Q + KP
Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 407
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 128 (50.1 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 246
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 247 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 297
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 353
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 354 AQDDPQKRK 362
Score = 127 (49.8 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 143
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 144 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 202
Query: 140 CEVYG 144
EVYG
Sbjct: 203 SEVYG 207
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + SG S +F E DD KR PD+
Sbjct: 322 NLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKK 367
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
LGW P L + L + Y + +A Q + KP
Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 407
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 127 (49.8 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 68 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 120
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 121 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 179
Query: 140 CEVYG 144
EVYG
Sbjct: 180 SEVYG 184
Score = 127 (49.8 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 168 KRVGARLLLASTSEVYGDPEVHPQTED----YWGHVNPVGPRACYDEGKRVAETMCYAYM 223
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 224 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 274
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 275 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 330
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 331 AQDDPQKRK 339
Score = 84 (34.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + SG S +F E DD KR PD+
Sbjct: 299 NLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKK 344
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
LGW P L + L + Y + +A Q + KP
Sbjct: 345 AKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 384
Score = 40 (19.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 83 LEGLIKMADLTIN--LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+ L + DL I + I P R L+ +F P VK+ SE +++ I
Sbjct: 17 MRSLQENGDLRIESKIEEIVEPLREKIRDLE---KSFTQKYPPVKFLSEKDRKRI 68
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 127 (49.8 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 91 ILVTGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 143
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 144 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 202
Query: 140 CEVYG 144
EVYG
Sbjct: 203 SEVYG 207
Score = 127 (49.8 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 47/189 (24%), Positives = 81/189 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 191 KRVGARLLLASTSEVYGDPEVHPQTED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 246
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 247 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 297
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + S L E
Sbjct: 298 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKNLVGSGSEIQFLSE 353
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 354 AQDDPQKRK 362
Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + SG S +F E DD KR PD+
Sbjct: 322 NLGNPE-EHTILEFAQLIKNLVG--SG-----------SEIQFLSEAQDDPQKRKPDIKK 367
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
LGW P L + L + Y + +A Q + KP
Sbjct: 368 AKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 407
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 127 (49.8 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 92 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 144
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 145 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 203
Query: 140 CEVYG 144
EVYG
Sbjct: 204 SEVYG 208
Score = 126 (49.4 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 47/189 (24%), Positives = 82/189 (43%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 192 KRVGARLLLASTSEVYGDPEVHPQNED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 247
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 248 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGPGTQTR 298
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ ++ S L E
Sbjct: 299 AFQYVSDLVNGLVALMNSNVSSP---VNLGNPE-EHTILEFAQLIKKLVGSGSEIQFLSE 354
Query: 321 PTVDVSSKE 329
D ++
Sbjct: 355 AQDDPQKRK 363
Score = 83 (34.3 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 29/100 (29%), Positives = 44/100 (44%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ ++ SG S +F E DD KR PD+
Sbjct: 323 NLGNPE-EHTILEFAQLIKKLVG--SG-----------SEIQFLSEAQDDPQKRKPDIRK 368
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKP 386
LGW P L + L + Y + +A Q + KP
Sbjct: 369 AKLLLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKP 408
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 127 (49.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 89 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 141
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 142 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 200
Query: 140 CEVYG 144
EVYG
Sbjct: 201 SEVYG 205
Score = 112 (44.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 46/184 (25%), Positives = 78/184 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 189 KRVGARLLLASTSEVYGDPEVHPQNED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 244
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN G RM G RV++ F L+ + L + G R
Sbjct: 245 KQEGVEVRVARIFNTFGSRMHMNDG---------RVVSNFILQALQGEALTVYGSGSQTR 295
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + ++ ++ + + N+GNP E T+ + A+++ + A S L E
Sbjct: 296 AFQYVSDLVNGLVSLMNSNISSP---VNLGNPE-EHTILEFAQLIKSLVASRSHIQFLPE 351
Query: 321 PTVD 324
D
Sbjct: 352 AQDD 355
Score = 85 (35.0 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/103 (29%), Positives = 45/103 (43%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + A+++ + A S +F E DD +R PD+
Sbjct: 320 NLGNPE-EHTILEFAQLIKSLVASRS-------------HIQFLPEAQDDPQRRRPDIRK 365
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTYA-EAIKQAVAKPVAS 389
LGW P L + L T+ Y R +A Q + KP A+
Sbjct: 366 AKLLLGWEPVVPLEEGLNKTIQYFSRELEHQANNQYIPKPKAA 408
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 117 (46.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G GF+GSHL +K++L+ H+++ALD Y + K++ E G + +
Sbjct: 139 ILITGGAGFVGSHLVDKLMLDG-HEVIALDNYFTGRKKNV---EHWIGHPNFEM----VH 190
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
HD +++ D +LA+ +P Y P+ TI +N + + ++ ++ S
Sbjct: 191 HDVVNPYFVEV-DQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVKATVLLAS 249
Query: 139 TCEVYG 144
T EVYG
Sbjct: 250 TSEVYG 255
Score = 114 (45.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI-FNVGNPH 293
RV++ F L+ +P+ + G R+F Y+ D ++ ++ ++ + N + N+GNP
Sbjct: 320 RVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNS----NYSLPVNIGNPE 375
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLG 353
E T+ Q A ++ ++ V G + V++ S++ DD +R PD+ +Q+
Sbjct: 376 -EHTIGQFATIIRDL---VPGSTS---EIVNLESQQ------DDPQQRRPDIRRAAEQIS 422
Query: 354 WNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPV 387
W P+ + D L T+ Y R + K+ KPV
Sbjct: 423 WAPQVHMKDGLLKTVDY-FRAEIDRNKRG-GKPV 454
Score = 112 (44.5 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 36/128 (28%), Positives = 61/128 (47%)
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
R Y K++ E L+ A + ++ I R FN GPRM G RV++ F
Sbjct: 276 RACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGPRMHMNDG---------RVVSNFI 326
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQ 300
L+ +P+ + G R+F Y+ D ++ ++ LM N + N+GNP E T+ Q
Sbjct: 327 IQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNSNYSLP----VNIGNPE-EHTIGQ 381
Query: 301 LAEMMTEV 308
A ++ ++
Sbjct: 382 FATIIRDL 389
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 129 (50.5 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 61/209 (29%), Positives = 96/209 (45%)
Query: 110 LDTIYSNFIDALPV-VKYCSENNKRLIHFSTCEVYG--KTIGS--FLPKDSPLRQDPAYY 164
+D IY A PV K+ + T + G K +G+ L S + DP
Sbjct: 183 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDP--- 239
Query: 165 VLKEDASPCIFGSIEK--QRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRM 220
L+ +G++ R Y K+ E L Y GA +E I R FN GPRM
Sbjct: 240 -LQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAN--VEVRIARIFNTYGPRM 296
Query: 221 DFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280
ID +G RV++ F LR++PL + G+ R+F ++ D +E ++ ++E
Sbjct: 297 C----ID---DG--RVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE- 346
Query: 281 RANGHI--FNVGNPHNEVTVRQLAEMMTE 307
H+ FN+GNP E T+ +LA+++ E
Sbjct: 347 ----HVGPFNLGNP-GEFTMLELAKVVQE 370
Score = 114 (45.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 31/129 (24%), Positives = 60/129 (46%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + + + G GF+GSHL ++++ I+ + + + ++++ S + I
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMI----- 171
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 172 --RHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 228
Query: 136 HFSTCEVYG 144
ST EVYG
Sbjct: 229 LTSTSEVYG 237
Score = 96 (38.9 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 27/74 (36%), Positives = 38/74 (51%)
Query: 287 FNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMT 346
FN+GNP E T+ +LA+++ E +P ++ EF DD KR PD+T
Sbjct: 351 FNLGNP-GEFTMLELAKVVQETI----------DPNANI---EFRPNTEDDPHKRKPDIT 396
Query: 347 IINQQLGWNPKTSL 360
+ LGW PK SL
Sbjct: 397 KAKELLGWEPKVSL 410
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 116 (45.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 38/140 (27%), Positives = 68/140 (48%)
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
R Y K++ E L YA + ++ + R FN GPRM G RV++ F
Sbjct: 255 RACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDG---------RVVSNFI 305
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQ 300
LR + + + G+ R+F Y+ D ++ ++ LM N + N+GNP E T+ +
Sbjct: 306 LQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQP----VNLGNPV-EQTIGE 360
Query: 301 LAEMMTEVYAKVSGEAALEE 320
AE++ ++ V G + +++
Sbjct: 361 FAEIIKKL---VGGPSVIKQ 377
Score = 105 (42.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL + ++++ H+++ +D + K +E G + + I H
Sbjct: 118 ILITGGAGFVGSHLVDDLMVQG-HEVIVVDNFFTGRKRNVE--HWLGHENFEL----IHH 170
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D + L D +LA+ +P Y P+ TI +N + + V+ +++ ST
Sbjct: 171 DI-VNPLFIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLIAST 229
Query: 140 CEVYG 144
EVYG
Sbjct: 230 SEVYG 234
Score = 86 (35.3 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 29/83 (34%), Positives = 42/83 (50%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ + AE++ ++ V G P+V SK DD +R PD+T
Sbjct: 349 NLGNPV-EQTIGEFAEIIKKL---VGG------PSVIKQSKAME----DDPQRRKPDITR 394
Query: 348 INQQLGWNPKTSLWDLLESTLTY 370
Q L W PK L L+ T++Y
Sbjct: 395 ARQLLHWEPKVPLETGLQRTISY 417
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 113 (44.8 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 41/144 (28%), Positives = 68/144 (47%)
Query: 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDV--YNDKIKHLLEPESQTG 66
+D KP I + GA GFI SH+ +++ P +KI+ LD Y +K+L +P +
Sbjct: 1 MDDTTYKPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNL-DPSFSS- 58
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADL-TINLAAICTPADYNT-RPLDTIYSNFIDALPVV 124
+F + +I D + L+ ++ TI A T D + + +N ++
Sbjct: 59 -PNFKFVKGDIASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 117
Query: 125 KYCSENN--KRLIHFSTCEVYGKT 146
+ C +R IH ST EVYG+T
Sbjct: 118 EACKVTGQIRRFIHVSTDEVYGET 141
Score = 111 (44.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 46/187 (24%), Positives = 86/187 (45%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR-VLACFSNN 243
Y+ K E L+ A G GL R N GP F P + +P+ +L S
Sbjct: 161 YSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ-F------PEKMIPKFILLAMSG- 212
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
+PL + G + R+++Y +D EA +++ GH++NVG E V +A
Sbjct: 213 ----KPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEI--GHVYNVGTKR-ERRVIDVAR 265
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
+ +++ K E++++ V ++ F + Y D+++ ++LGW +T+ D
Sbjct: 266 DICKLFGK-DPESSIQF----VENRPFNDQRYFLDDQKL-------KKLGWQERTNWEDG 313
Query: 364 LESTLTY 370
L+ T+ +
Sbjct: 314 LKKTMDW 320
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 147 (56.8 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 64/222 (28%), Positives = 102/222 (45%)
Query: 110 LDTIYSNFIDALPVV-KYCSENNKRLIHFSTCEVYG--KTIGS--FLPKDSPLRQDPAYY 164
+D IY A P+ KY + T + G K +G+ L S + DP +
Sbjct: 94 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIH 153
Query: 165 VLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDF 222
E +G++ R Y K++ E L++ ++G+E I R FN GPRM+
Sbjct: 154 PQPES----YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN- 208
Query: 223 IPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA 282
ID +G RV++ F LR + L + G R+F Y+ D ++ ++ ++E
Sbjct: 209 ---ID---DG--RVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDD-- 258
Query: 283 NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324
G I N+GNP E T+ +LAE + E+ S E + E T D
Sbjct: 259 TGPI-NIGNP-GEFTMVELAETVKELI-NPSIEIKMVENTPD 297
Score = 129 (50.5 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L+ G R + I+H
Sbjct: 31 ILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK--KWIGHPRFEL----IRH 84
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 85 DVT-EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 143
Query: 140 CEVYG 144
EVYG
Sbjct: 144 SEVYG 148
Score = 83 (34.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ +LAE + E L P++++ E DD +R PD+T
Sbjct: 263 NIGNP-GEFTMVELAETVKE----------LINPSIEIKMVE---NTPDDPRQRKPDITK 308
Query: 348 INQQLGWNPKTSL 360
+ LGW PK L
Sbjct: 309 AKEVLGWEPKVKL 321
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 120 (47.3 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 38/148 (25%), Positives = 69/148 (46%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +V+ F + L + + G R F+Y D +EA L +++ G I+
Sbjct: 198 GPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKP--GEIY 255
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+G + E++V QLA+ + ++ + S E+ +E VD Y +D R P +
Sbjct: 256 NIGT-NFEMSVLQLAKELIQLIKETSSESEMET-WVD------YVNDRPTNDMRYPMKSE 307
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTY 375
Q LGW PK + ++ T+ + +
Sbjct: 308 KIQGLGWRPKVPWKEGIKKTIDWYRENF 335
Score = 93 (37.8 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 42/163 (25%), Positives = 71/163 (43%)
Query: 20 ICMIGAGGFIGSHLCEKILLETP-HKILALDV--YNDKIKHLLEPESQTGADRIQFHRLN 76
+ + G GFI SH+ ++ + P + I+ LD Y +K+L ++ IQ N
Sbjct: 20 LLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDICN 79
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYN-TRPLDTIYSNFIDALPVVKYCSENN-KRL 134
H +L + D+ ++ AA T D + R + Y N +V E ++
Sbjct: 80 -SHFVKLLFETEKIDIVLHFAAQ-THVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKF 137
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
I+ ST EVYG ++ + SP +Q Y + A+ C S
Sbjct: 138 IYVSTDEVYGGSLDKEFDESSP-KQPTNPYASSKAAAECFVQS 179
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 153 (58.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 65/222 (29%), Positives = 102/222 (45%)
Query: 110 LDTIYSNFIDALPVV-KYCSENNKRLIHFSTCEVYG--KTIGS--FLPKDSPLRQDPAYY 164
+D IY A P+ KY + T + G K +G+ L S + DP +
Sbjct: 96 VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVH 155
Query: 165 VLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDF 222
E +G++ R Y K++ E L++ ++G+E I R FN GPRM+
Sbjct: 156 PQTES----YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN- 210
Query: 223 IPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA 282
ID +G RV++ F LR + L + G R+F Y+ D +E ++ ++E
Sbjct: 211 ---ID---DG--RVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQ-- 260
Query: 283 NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324
G I N+GNP E T+ +LAE + E+ K E + E T D
Sbjct: 261 TGPI-NIGNP-GEFTMVELAETVKELI-KPDVEIKMVENTPD 299
Score = 130 (50.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 39/125 (31%), Positives = 58/125 (46%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L+ G R + I+H
Sbjct: 33 ILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLK--KWIGHPRFEL----IRH 86
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 87 DVT-EPLFVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 145
Query: 140 CEVYG 144
EVYG
Sbjct: 146 SEVYG 150
Score = 79 (32.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 25/73 (34%), Positives = 36/73 (49%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ +LAE + E L +P V++ E DD +R PD++
Sbjct: 265 NIGNP-GEFTMVELAETVKE----------LIKPDVEIKMVE---NTPDDPRQRKPDISK 310
Query: 348 INQQLGWNPKTSL 360
+ LGW PK L
Sbjct: 311 AKEVLGWEPKVKL 323
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 112 (44.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +V+ F + L + + G +R F+Y D +EA L ++ G I+
Sbjct: 198 GPHQYPEKVIPKFISLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEP--GEIY 255
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+G + E++V QLA+ + ++ + + E+ E VD Y +D R P +
Sbjct: 256 NIGT-NFEMSVVQLAKELIQLIKETNSESETES-WVD------YVSDRPHNDMRYPMKSE 307
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTY 375
LGW PK + ++ T+ + + +
Sbjct: 308 KIHSLGWKPKVPWEEGIKKTVEWYRKNF 335
Score = 98 (39.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 50/185 (27%), Positives = 83/185 (44%)
Query: 1 MAGASVRLDLDGRPIK-PVTICMIGAGGFIGSHLCEKILLETP-HKILALDV--YNDKIK 56
M+ AS R + G P + + G GFI SH+ ++ + P + I+ LD Y +K
Sbjct: 1 MSAAS-REERSGPPGSFAKRVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLK 59
Query: 57 HLLEPESQTGADRIQFHRLNI--KHDSRLEGLIKMADLTINLAAICTPADYN-TRPLDTI 113
+L EP S +F + +I H +L ++ D+ ++ AA T D + R +
Sbjct: 60 NL-EPVSNK--QNYKFIQGDICDSHFVKLLFEVEKIDIVLHFAAQ-THVDLSFVRAFEFT 115
Query: 114 YSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
Y N +V E ++ I+ ST EVYG ++ + SP +Q Y + A+
Sbjct: 116 YVNVYGTHVLVNAAYEAGVEKFIYVSTDEVYGGSLDQEFDESSP-KQPTNPYASSKAAAE 174
Query: 173 CIFGS 177
C S
Sbjct: 175 CFVQS 179
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 148 (57.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 64/222 (28%), Positives = 102/222 (45%)
Query: 110 LDTIYSNFIDALPVV-KYCSENNKRLIHFSTCEVYG--KTIGS--FLPKDSPLRQDPAYY 164
+D IY A P+ KY + T + G K +G+ L S + DP +
Sbjct: 110 VDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIH 169
Query: 165 VLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDF 222
E +G++ R Y K++ E L++ ++G+E I R FN GPRM+
Sbjct: 170 PQPES----YWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN- 224
Query: 223 IPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA 282
ID +G RV++ F LR + L + G R+F Y+ D ++ ++ ++E
Sbjct: 225 ---ID---DG--RVVSNFIAQALRGEALTVQKPGTQTRSFCYVSDMVDGLIRLMEG--ND 274
Query: 283 NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD 324
G I N+GNP E T+ +LAE + E+ S E + E T D
Sbjct: 275 TGPI-NIGNP-GEFTMVELAETVKELI-NPSIEIKMVENTPD 313
Score = 129 (50.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L+ G R + I+H
Sbjct: 47 ILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLK--KWIGHPRFEL----IRH 100
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 101 DVT-EPLLIEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 159
Query: 140 CEVYG 144
EVYG
Sbjct: 160 SEVYG 164
Score = 79 (32.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+GNP E T+ +LAE + E L P++++ E DD +R PD++
Sbjct: 279 NIGNP-GEFTMVELAETVKE----------LINPSIEIKMVE---NTPDDPRQRKPDISK 324
Query: 348 INQQLGWNPKTSL 360
+ LGW PK L
Sbjct: 325 AKEVLGWEPKVKL 337
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 114 (45.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 45/192 (23%), Positives = 84/192 (43%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
YA +K E + + + I R N GP P + +P+ ++ +N
Sbjct: 166 YASSKAAAECFVQSYWEQYKFPVVITRSSNVYGPHQY-------PEKVIPKFISLLQHN- 217
Query: 245 LRRQPLKLVDG-GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
R+ + G G R F+Y D +EA L +++ G I+N+G + E++V QLA+
Sbjct: 218 -RKC---CIHGTGLQTRNFLYATDVVEAFLTVLKKGKP--GEIYNIGT-NFEMSVLQLAK 270
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
+ ++ + + E+ +E VD Y + +D R P + LGW PK +
Sbjct: 271 ELIQLIKETNSESEMEN-WVD------YVDDRPTNDMRYPMKSEKIHGLGWRPKVPWKEG 323
Query: 364 LESTLTYQHRTY 375
++ T+ + +
Sbjct: 324 IKKTIEWYRENF 335
Score = 95 (38.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 42/167 (25%), Positives = 73/167 (43%)
Query: 20 ICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI- 77
+ + G GFI SH+ ++ + P + I+ LD D L E+ + +F + +I
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKL-DYCASLKNLETISNKQNYKFIQGDIC 78
Query: 78 -KHDSRLEGLIKMADLTINLAAICTPADYN-TRPLDTIYSNFIDALPVVKYCSENN-KRL 134
H +L + D+ ++ AA T D + R + Y N +V E ++
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQ-THVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKF 137
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
I+ ST EVYG ++ + SP +Q Y + A+ C S +Q
Sbjct: 138 IYVSTDEVYGGSLDKEFDESSP-KQPTNPYASSKAAAECFVQSYWEQ 183
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 107 (42.7 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 39/136 (28%), Positives = 63/136 (46%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPE-SQTGA-DRIQ 71
+K T+ + G GFIG HL +++L H IL LD ND +L E +Q
Sbjct: 4 VKMRTL-VTGCAGFIGFHLTKRLLARGDH-ILGLDNLNDYYDVNLKEARLAQLKEFPHFS 61
Query: 72 FHRLNIKHDSRLEGLIK--MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
FH+L++ + L + + D ++LAA T P + SN + +++ C
Sbjct: 62 FHKLDLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRH 121
Query: 130 NN-KRLIHFSTCEVYG 144
+ K L+ S+ VYG
Sbjct: 122 QSVKHLVFASSSSVYG 137
Score = 101 (40.6 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANG-HI 286
GP L F+ NLL +P+ + + G+ R F YI D ++ +LL +++P N +
Sbjct: 189 GPWGRPDMALFKFTRNLLADKPIDVYNHGKMSRDFTYIDDIVDGILLTLDHPPEPNSAYS 248
Query: 287 FNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSS-KEFYGEGYDDSDKRIPDM 345
N NP ++ + + ++ A+ E T++ + K F D + D+
Sbjct: 249 ANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKAIKNFLPLQPGDVPETYADV 308
Query: 346 TIINQQLGWNPKTSL 360
+ + + + P+T L
Sbjct: 309 SQLEKDFQYRPRTPL 323
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 112 (44.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 36/148 (24%), Positives = 68/148 (45%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +V+ F + L + + G R F+Y D +EA L +++ G I+
Sbjct: 198 GPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKP--GEIY 255
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+G + E++V QLA+ + ++ + + E+ +E VD Y +D R P +
Sbjct: 256 NIGT-NFEMSVVQLAKELIQLIKETNSESEMEN-WVD------YVNDRPTNDMRYPMKSE 307
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTY 375
LGW PK + ++ T+ + +
Sbjct: 308 KIHGLGWRPKVPWKEGIKKTIEWYRENF 335
Score = 95 (38.5 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 42/167 (25%), Positives = 73/167 (43%)
Query: 20 ICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI- 77
+ + G GFI SH+ ++ + P + I+ LD D L E+ + +F + +I
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKL-DYCASLKNLETISNKQNYKFIQGDIC 78
Query: 78 -KHDSRLEGLIKMADLTINLAAICTPADYN-TRPLDTIYSNFIDALPVVKYCSENN-KRL 134
H +L + D+ ++ AA T D + R + Y N +V E ++
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQ-THVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVEKF 137
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
I+ ST EVYG ++ + SP +Q Y + A+ C S +Q
Sbjct: 138 IYVSTDEVYGGSLDKEFDESSP-KQPTNPYASSKAAAECFVQSYWEQ 183
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 102 (41.0 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 40/140 (28%), Positives = 65/140 (46%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG-ADRIQFH--RLN 76
I + G GFIGS L ++ +T +L D K+ + PES G AD ++H + +
Sbjct: 3 ILVTGGAGFIGSALVRMLIEQTESVVLNFD----KLTYASHPESLAGVADNERYHFVQAD 58
Query: 77 IKHDSRLEGLIKM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC------- 127
I +RLE +++ DL ++LAA P + I +N + +++ C
Sbjct: 59 ICDRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTL 118
Query: 128 ---SENNKRLIHFSTCEVYG 144
+ RL H ST EV+G
Sbjct: 119 GQAQQRRFRLHHISTDEVFG 138
Score = 102 (41.0 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 33/147 (22%), Positives = 65/147 (44%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +++ +N L+ +PL + GQ R ++Y+ D ++A L ++ + G +
Sbjct: 190 GPFQYPEKLIPLMVSNALQSKPLPIYGNGQQVRDWLYVDDHVKA-LYLVATQGQL-GQTY 247
Query: 288 NVGNP---HNEVTVRQLAEMMTEVYAKVSGEAALEEPT-VDVSSKEFYGEGYDDSDKRIP 343
N+G N VR + ++ E+ A+ D+ G+D +
Sbjct: 248 NIGGSCEQTNLTVVRHICSLLEELVPTHPQSLAMGNAGFADLIQYVVDRPGHDV--RYAI 305
Query: 344 DMTIINQQLGWNPKTSLWDLLESTLTY 370
D + I ++LGW P+ S L T+ +
Sbjct: 306 DASKIQRELGWRPQESFESGLRKTVEW 332
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 118 (46.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +V+ F + L + + + G +R F+Y D +EA L +++ G I+
Sbjct: 203 GPHQYPEKVIPKFISLLQQNRKCCIHGSGLQRRNFLYATDVVEAFLTVLKEGKP--GEIY 260
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+G + E+++ QLA+ + + K S E+ +E +D Y + +D R P +
Sbjct: 261 NIGT-NFEMSIVQLAKELIHLIKKTSSESEMEH-WMD------YVKDRPTNDLRYPMSSE 312
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTY 375
LGW PK + ++ T+ + +
Sbjct: 313 KMHNLGWRPKVPWKEGIKKTIEWYKENF 340
Score = 82 (33.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 45/183 (24%), Positives = 79/183 (43%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLL 59
M+G VR ++ P + + G GFI SH+ ++ P + I+ LD D L
Sbjct: 9 MSGPPVREEV---PRFEKRLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKL-DYCASLK 64
Query: 60 EPESQTGADRIQFHRLNIKHDSRLEGLIKMA--DLTINLAAICTPADYNT-RPLDTIYSN 116
E+ + + +F + +I ++ L + D+ ++ AA T D + L+ Y N
Sbjct: 65 NLETVSEKENYKFIQGDICEPHFIKQLFETEKIDIVLHFAAQ-THVDLSFWHALEFTYVN 123
Query: 117 FIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSP-LRQDPAYYVLKEDASPCI 174
+V E N ++ ++ ST EVYG + + SP +P Y + A+ C
Sbjct: 124 VYGTNVLVAAAHEANVEKFVYVSTDEVYGGSTDQEFDESSPKCPTNP--YASSKAAAECF 181
Query: 175 FGS 177
S
Sbjct: 182 VQS 184
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 112 (44.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +V+ F + L + + G R F+Y D +EA L +++ G I+
Sbjct: 198 GPHQYPEKVIPKFISLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTVLKKGKP--GEIY 255
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+G + E++V QLA+ + ++ + E+ +E VD Y +D R P +
Sbjct: 256 NIGT-NFEMSVLQLAKELIQLIKETKSESEMEN-WVD------YVNDRPTNDMRYPMKSE 307
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTY 375
LGW PK + ++ T+ + +
Sbjct: 308 KIHGLGWRPKVPWKEGIKKTIEWYRENF 335
Score = 87 (35.7 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 40/163 (24%), Positives = 71/163 (43%)
Query: 20 ICMIGAGGFIGSHLCEKILLETP-HKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI- 77
+ + G GFI SH+ ++ + P + I+ LD D L E+ + +F + +I
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKL-DYCASLKNLETISDKQNYKFIQGDIC 78
Query: 78 -KHDSRLEGLIKMADLTINLAAICTPADYN-TRPLDTIYSNFIDALPVVKYCSENN-KRL 134
H +L + D+ ++ AA T D + R + Y N ++ E ++
Sbjct: 79 DSHFVKLLFETEKIDIVLHFAAQ-THVDLSFVRAFEFTYVNVYGTHVLLSAAHEARVEKF 137
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
I+ ST EVYG ++ + SP +Q Y + A+ C S
Sbjct: 138 IYVSTDEVYGGSLDKEFDESSP-KQPTNPYASSKAAAECFVQS 179
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 100 (40.3 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 42/160 (26%), Positives = 71/160 (44%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
KP+ I + G GFIGSH+ + +LL+ ++ +D N K H E + + F
Sbjct: 3 KPIAI-VTGGAGFIGSHMVD-LLLDCGFQVRVID--NLKGGHRRNLEHRANNPDLTFEIK 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE--NNKR 133
+I S L + D + A I P+D + +N + + V++ C+ N K+
Sbjct: 59 DICELSAPHPLFENVDYVFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLE-CARAANVKK 117
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQD----PAY-YVLKE 168
L++ ++ YG D P R+D P Y Y L +
Sbjct: 118 LVYAASSSCYGLA-------DVPTREDHPIAPQYPYALSK 150
Score = 95 (38.5 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 39/137 (28%), Positives = 58/137 (42%)
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
++ YA +K L E + GL +R FN G R+ G+ G GV F
Sbjct: 143 QYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNAYGTRVR-TTGVYGAVFGV------FF 195
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQL 301
L +P +V G +R F+Y+ D A L E R G +N+G N ++ +L
Sbjct: 196 KQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAET--RKVGETWNLG-AGNPQSINRL 252
Query: 302 AEMM---TEVYAKVSGE 315
E++ E K GE
Sbjct: 253 VELIGGEVEYIPKRPGE 269
Score = 40 (19.1 bits), Expect = 2.8e-08, Sum P(3) = 2.8e-08
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 344 DMTIINQQLGWNPKTSLWD 362
D++ I + LGW P + D
Sbjct: 276 DISKIKRDLGWEPTITFAD 294
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 105 (42.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 35/148 (23%), Positives = 67/148 (45%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +V+ F + L + + G +R F+Y D +EA L ++ G I+
Sbjct: 198 GPHQYPEKVIPKFISLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTVLTKGEP--GEIY 255
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
N+G + E++V QLA+ + ++ + + ++ E VD Y +D R P +
Sbjct: 256 NIGT-NFEMSVVQLAKELIQLIKETNSDSETER-WVD------YVSDRPHNDMRYPMKSE 307
Query: 348 INQQLGWNPKTSLWDLLESTLTYQHRTY 375
LGW PK + ++ T+ + +
Sbjct: 308 KIHSLGWKPKVPWEEGIKKTVEWYRENF 335
Score = 92 (37.4 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 49/185 (26%), Positives = 82/185 (44%)
Query: 1 MAGASVRLDLDGRPIK-PVTICMIGAGGFIGSHLCEKILLETP-HKILALDV--YNDKIK 56
M+ AS R + G P + + G GFI SH+ ++ + P + I+ LD Y +K
Sbjct: 1 MSAAS-REERSGPPGSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLK 59
Query: 57 HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMA--DLTINLAAICTPADYN-TRPLDTI 113
+L EP S +F + +I ++ L + D+ ++ AA T D + R +
Sbjct: 60 NL-EPVSNK--QNYKFIQGDICDSHFVKRLFESEKIDIVLHFAAQ-THVDLSFVRAFEFT 115
Query: 114 YSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
Y N +V E ++ I+ ST EVYG ++ + SP +Q Y + A+
Sbjct: 116 YVNVYGTHVLVNTAYEARVEKFIYVSTDEVYGGSLDQEFDESSP-KQPTNPYASSKAAAE 174
Query: 173 CIFGS 177
C S
Sbjct: 175 CFVQS 179
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 111 (44.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +V+ F + L ++Q + G R F+Y+ D +A L ++E G I+
Sbjct: 187 GPRQHHEKVIPRFLSLLQQQQKCTIQGSGLQSRHFLYVSDVTDAFLTVMEKGIL--GEIY 244
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAK-VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMT 346
N+G E+ + QLA + ++ K VS E+ L++ EF E ++ R P +
Sbjct: 245 NIGTGF-EIPIIQLARELVQMTVKSVSAES-LDDWL------EFV-EDRPVTELRYPMNS 295
Query: 347 IINQQLGWNPKTSLW 361
+ +LGW PK + W
Sbjct: 296 VKLHRLGWRPKVA-W 309
Score = 84 (34.6 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 41/152 (26%), Positives = 65/152 (42%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPH-KILALD--VYNDKIKHLLEPESQTGADRIQ---F 72
T+ + G GFIGSHL + PH +I+ +D Y +K+L ++ + I
Sbjct: 8 TVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIPGDVC 67
Query: 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN- 131
L IKH E + D+ + AA + P + N +V+ E +
Sbjct: 68 DPLFIKHLFSTEHI----DVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASV 123
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAY 163
+R I+ ST EVYG ++ + SP R Y
Sbjct: 124 QRFIYISTDEVYGDSVDQPFDELSPKRPTNPY 155
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 100 (40.3 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 42/160 (26%), Positives = 76/160 (47%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD--VYNDKIKHLLEPESQTGADRIQFHRLNI 77
I + G GFIGS K + H+++ +D Y ++ + E DRI+F++ ++
Sbjct: 3 ILVTGGAGFIGSAFVRKYAYD--HELIIVDKLTYAGDLRRIEEVR-----DRIKFYKADV 55
Query: 78 KHDSRLEGLI--KMADLTINLAAICTPADYNTR-PLDTIYSNFIDALPVVKYCSENN--K 132
+ +E + + + ++ AA + D + + P I +N + V+ S +
Sbjct: 56 ADKTAIEEIFDKEKPEAVVHFAAE-SHVDRSIQDPTPFIETN-VKGTQVMLDASRKYGIE 113
Query: 133 RLIHFSTCEVYGKT--IGSFLPKDSPLRQDPAYYVLKEDA 170
+ +H ST EVYG+ G F ++SPLR + Y V K A
Sbjct: 114 KFVHISTDEVYGELGKEGQFT-EESPLRPNSPYSVSKAAA 152
Score = 93 (37.8 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 30/121 (24%), Positives = 56/121 (46%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +K + L A GL + RP N GP + P + +P V+ NN
Sbjct: 145 YSVSKAAADMLARAYHRTYGLPVIVARPCNNYGP-WQY------PEKLIPVVIKKALNN- 196
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304
+P+ + G + R ++Y+ D IEAV L+++ G +N+G+ + + + E+
Sbjct: 197 ---EPIPVYGQGLNVREWLYVDDCIEAVYLLLQKGKP--GEAYNIGSGEEKGNIEVVKEI 251
Query: 305 M 305
+
Sbjct: 252 L 252
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 120 (47.3 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND--KIKHLLEPESQT-GADRIQFHRL 75
+I + GA GFIG HL ++ LL+ +++ LD ND + L+ Q G + F R
Sbjct: 3 SILVTGAAGFIGFHLTKR-LLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRT 61
Query: 76 NIKHDSRLEGLI--KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K 132
++ LE L + D+ +NLAA T P + SN + + +++ C + K
Sbjct: 62 SLADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVK 121
Query: 133 RLIHFSTCEVYG 144
L++ S+ VYG
Sbjct: 122 HLVYASSSSVYG 133
Score = 71 (30.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV-LACFSNN 243
YA K+ E + + + GL T +R F GP G P + L F+
Sbjct: 153 YAATKKANELMAHTYSSLYGLPTTGLRFFTVYGPW------------GRPDMALFLFTKA 200
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARAN 283
+L +P+ + + G+ QR F Y+ D +E V +++ N
Sbjct: 201 ILEGRPIDVYNFGKMQRDFTYVDDIVEGVTRVMDRTPEPN 240
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 111 (44.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 30/128 (23%), Positives = 64/128 (50%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +K I+ +I + L TI+RP N GP + P + +P + C +
Sbjct: 155 YSASKAAIDLIIKSYQYSYKLPITILRPNNVYGP-------LQYPEKIIPLTIQCINE-- 205
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAV-LLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
++P+ + G ++R ++Y+ D + A+ + I+NP I+N+G +E+ L +
Sbjct: 206 --KKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMTTVNQIYNIGGT-DELDNLSLIK 262
Query: 304 MMTEVYAK 311
++ E++ +
Sbjct: 263 LIMEIFGR 270
Score = 100 (40.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAV-LLMIENPARANGHI 286
GP + +++ + ++P+ + G ++R ++Y+ D + A+ + I+NP I
Sbjct: 187 GPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMTTVNQI 246
Query: 287 FNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMT 346
+N+G +E+ L +++ E++ + GE + + Y+D++ I D T
Sbjct: 247 YNIGGT-DELDNLSLIKLIMEIFGR--GEIQF------IKDRN-----YNDTNYSI-DTT 291
Query: 347 IINQQLGWNPKTSL 360
I+ LGW+PK SL
Sbjct: 292 KIHN-LGWSPKISL 304
Score = 79 (32.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 34/131 (25%), Positives = 53/131 (40%)
Query: 20 ICMIGAGGFIGSH-LCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G GFIG H LC + +D N + E E+ +F L++
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN-YASNATEIENLKSFSNFEFVHLDLS 67
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY--SNFIDALPVVKYCSENNKRL-- 134
+ LE L+K+ T ++ + + D +Y N I A + C N +
Sbjct: 68 DN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIGY 125
Query: 135 -IHFSTCEVYG 144
+H ST EVYG
Sbjct: 126 FLHISTDEVYG 136
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 111 (44.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 30/128 (23%), Positives = 64/128 (50%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +K I+ +I + L TI+RP N GP + P + +P + C +
Sbjct: 155 YSASKAAIDLIIKSYQYSYKLPITILRPNNVYGP-------LQYPEKIIPLTIQCINE-- 205
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAV-LLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
++P+ + G ++R ++Y+ D + A+ + I+NP I+N+G +E+ L +
Sbjct: 206 --KKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMTTVNQIYNIGGT-DELDNLSLIK 262
Query: 304 MMTEVYAK 311
++ E++ +
Sbjct: 263 LIMEIFGR 270
Score = 100 (40.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 32/134 (23%), Positives = 67/134 (50%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAV-LLMIENPARANGHI 286
GP + +++ + ++P+ + G ++R ++Y+ D + A+ + I+NP I
Sbjct: 187 GPLQYPEKIIPLTIQCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETVWIKNPMTTVNQI 246
Query: 287 FNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMT 346
+N+G +E+ L +++ E++ + GE + + Y+D++ I D T
Sbjct: 247 YNIGGT-DELDNLSLIKLIMEIFGR--GEIQF------IKDRN-----YNDTNYSI-DTT 291
Query: 347 IINQQLGWNPKTSL 360
I+ LGW+PK SL
Sbjct: 292 KIHN-LGWSPKISL 304
Score = 79 (32.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 34/131 (25%), Positives = 53/131 (40%)
Query: 20 ICMIGAGGFIGSH-LCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G GFIG H LC + +D N + E E+ +F L++
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN-YASNATEIENLKSFSNFEFVHLDLS 67
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY--SNFIDALPVVKYCSENNKRL-- 134
+ LE L+K+ T ++ + + D +Y N I A + C N +
Sbjct: 68 DN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLECHRLNPSIGY 125
Query: 135 -IHFSTCEVYG 144
+H ST EVYG
Sbjct: 126 FLHISTDEVYG 136
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 118 (46.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 51/162 (31%), Positives = 76/162 (46%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK-----IKHLLEPESQTGADR 69
+K I + GA GFIGSHL E +L+ + A YN + HL +PE D
Sbjct: 3 LKGKKILVTGADGFIGSHLTEALLMRG-YDTRAFVYYNSFNSWGWLDHL-DPELLKSLD- 59
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAA-ICTPADYNTRPLDTIYSNFIDALPVVKYCS 128
+ + H R E + K D+ ++LAA I P Y++ P + +N L VV+
Sbjct: 60 VFAGDIRDPHGVR-EAM-KGCDVVLHLAALIAIPYSYHS-PDTYVDTNVKGTLNVVQAAR 116
Query: 129 ENN-KRLIHFSTCEVYGKTIGSFLP--KDSPLRQDPAYYVLK 167
E +++H ST EVYG F+P ++ PL+ Y K
Sbjct: 117 ELGVAKVVHTSTSEVYGTA--RFVPITEEHPLQGQSPYSASK 156
Score = 66 (28.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 209 IVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG-QSQRTFIYIKD 267
I+RPFN GPR +P V+ ++ + L+L G R Y+ D
Sbjct: 176 IIRPFNTYGPRQS-------ARAFIPTVITQIASGA---RTLRL--GALHPTRDLNYVAD 223
Query: 268 AIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
+ + + E+ ++ G + N+G+ + E+++ + A M+ +V
Sbjct: 224 TVAGFIAVAESE-KSVGEVINIGS-NFEISMGETARMIADV 262
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 110 (43.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 39/137 (28%), Positives = 70/137 (51%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI----KH----LLEPESQ-TGADRI 70
I + GA GFIGSH + LL + + +L +D + + I +H L+ +Q TG D +
Sbjct: 3 ILVTGAAGFIGSHTVLE-LLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKD-V 60
Query: 71 QFHRLNIKHDSRLEGLIK--MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 128
F +++ ++ LE + D I+LAA+ + +PL +N + +L +++ C
Sbjct: 61 PFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCL 120
Query: 129 ENN-KRLIHFSTCEVYG 144
+ N K + S+ VYG
Sbjct: 121 KYNVKNFVFSSSATVYG 137
Score = 71 (30.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 47/196 (23%), Positives = 80/196 (40%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIV--RPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
Y K ++E+++ G N E+ +V R FN +G + G D P +GVP L + +
Sbjct: 158 YGQTKYMMEQILIDVGKANP-EWNVVLLRYFNPVGAHKSGLIGED-P-KGVPNNLMPYVS 214
Query: 243 NL-LRRQPLKLVDGGQSQRTF-IYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVT--- 297
+ + + P+ + G Q ++D I V L + +A I VGN E+
Sbjct: 215 QVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLA-KGHVKAFDRIKTVGNIGTEIYNLG 273
Query: 298 --VRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWN 355
V M + KVSG D+ K D + D ++ ++LGW
Sbjct: 274 TGVGYSVRQMVDALKKVSGR--------DIPVKIGVPRPGDVASVYC-DPSLAQEKLGWR 324
Query: 356 PKTSLWDLLESTLTYQ 371
+T L ++ +Q
Sbjct: 325 AETGLEEMCADLWNWQ 340
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 126 (49.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 46/152 (30%), Positives = 66/152 (43%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + GA GFIGSHLCE L++ K+ AL YN E ++ +++
Sbjct: 4 ILVTGADGFIGSHLCES-LVKKGFKVRALSQYNS-FNFWGHLEKSPFLKDMEVVSGDLRD 61
Query: 80 DSRLEGLIKMADLTINLAA-ICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHF 137
E + K D +L A I P Y T P + +N L +++ +N IH
Sbjct: 62 SFFCEKITKNIDAIFHLGALIAIPYSY-TAPQSYVDTNVNGTLNMLEAAKKNEISHFIHT 120
Query: 138 STCEVYGKTIGSFLPKDS--PLRQDPAYYVLK 167
ST EVYG ++P D PL+ Y K
Sbjct: 121 STSEVYGTAF--YVPIDEKHPLQPQSPYSASK 150
Score = 52 (23.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 29/147 (19%), Positives = 65/147 (44%)
Query: 162 AYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221
A+YV ++ P ++ Q Y+ +K + + + L I RPFN GPR
Sbjct: 129 AFYVPIDEKHP-----LQPQS-PYSASKIAADMMALSYYNSFNLNVNIARPFNTYGPRQS 182
Query: 222 FIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR 281
I +P ++ + L + +KL D +R ++ D E + ++ +
Sbjct: 183 -ARAI------IPTII---TQILSGAKEIKLGDLSP-KRDLNFVLDTCEGFISLLN--LK 229
Query: 282 ANGHIFNVGNPHNEVTVRQLAEMMTEV 308
G ++N+G+ E +++++ ++ ++
Sbjct: 230 HFGEVYNIGSGV-EYSMQEVLNLIQKI 255
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 101 (40.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 53/213 (24%), Positives = 88/213 (41%)
Query: 160 DPAYYVLKEDASP-CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGP 218
D Y ED +P S+ YA +K E +I + L + +VR N GP
Sbjct: 138 DEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYVMVRMNNVYGP 197
Query: 219 RMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVL-LMIE 277
R ++ +P+ F+ L +P L+ G R+++Y++D EA+ + +E
Sbjct: 198 RQIH-------TKLIPK----FTKLALDGKPYPLMGDGLHTRSWMYVEDCSEAITRVALE 246
Query: 278 NPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDD 337
G I+N+G E+T +L +M+ +K+ EPT + Y D
Sbjct: 247 GTL---GEIYNIGTDF-EMTNIELTKMIHFTVSKLLNR----EPTAPTFAP-IPDRPYHD 297
Query: 338 SDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
I D + I +GW T + L T+ Y
Sbjct: 298 RRYYI-DFSKIRNAMGWQCTTPFSEGLMKTIDY 329
Score = 80 (33.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 40/149 (26%), Positives = 65/149 (43%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPH-KILALD--VYNDKIKHLLEPESQTGADRIQF 72
+P + + G GFIGS+ + + K + D + H+ E E + + R +F
Sbjct: 7 EPTCVLITGGCGFIGSNYINFTFNKWKNTKFINYDKLAFGASPLHV-EKEIRE-SPRYKF 64
Query: 73 HRLNIKHDSRLEGLIKM--ADLTINLAAICTPAD--YNTRPLDTIYSNFIDALP----VV 124
++ L ++ D+ I+ AAI T D Y+ R + TI N I +V
Sbjct: 65 VEAALEDQPTLIKTLQENEVDMVIHFAAI-THVDESYSDR-IGTIQDNIISTTTLLESIV 122
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPK 153
+ K+L+H ST EVYG + PK
Sbjct: 123 NSPYKGVKKLVHISTDEVYGDSFEDTTPK 151
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 127 (49.8 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/125 (29%), Positives = 62/125 (49%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 86
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 87 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 145
Query: 140 CEVYG 144
EVYG
Sbjct: 146 SEVYG 150
>UNIPROTKB|Q83AP4 [details] [associations]
symbol:CBU_1837 "UDP-glucose 4-epimerase" species:227377
"Coxiella burnetii RSA 493" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 GO:GO:0003978
HOGENOM:HOG000168002 RefSeq:NP_820816.2 ProteinModelPortal:Q83AP4
PRIDE:Q83AP4 GeneID:1209749 KEGG:cbu:CBU_1837 PATRIC:17932405
OMA:RMRFDIV ProtClustDB:CLSK915066
BioCyc:CBUR227377:GJ7S-1811-MONOMER Uniprot:Q83AP4
Length = 346
Score = 102 (41.0 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 50/199 (25%), Positives = 85/199 (42%)
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG--PRMDFIPGIDGPSEGVPRVLACFS 241
+YA A + E+ I ++ T++R G PRM F I+G V +
Sbjct: 139 TYAKANEKAEKEILPLATDD-FTVTVMRQATVYGYSPRMRFDLAING------MVYGAWE 191
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQ 300
+ + PL + DG Q R ++++D + ++L+++ A NG I NVG ++
Sbjct: 192 DKCI---PL-MRDGTQ-YRPMVHVQDTTDVMVLLLQADASEINGQIINVGCEEQNYQLQP 246
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
L +++ EV + E E D + +Y D KRI +N Q W+
Sbjct: 247 LGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSF--DKIKRI-----LNWQPQWDAAKGA 299
Query: 361 WDLLESTLTYQHRTYAEAI 379
+L+E Q + AE I
Sbjct: 300 VELIEKLKNNQLQKTAETI 318
Score = 75 (31.5 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 39/148 (26%), Positives = 68/148 (45%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH-RLNI 77
T+ + GAGG+IGS L K+L + H + A+D + G+D++ H L +
Sbjct: 5 TVLVTGAGGYIGSVLVPKLLNKGYH-VKAVDRF------------YFGSDKLSQHPHLEL 51
Query: 78 KHDS--RLE-GLIKMADLTINLAAICT-PAD--YNTRPLDTIYSNFIDALPVVKYCSENN 131
++ RL+ L D I+LAA+ P+ + + + + + + K +
Sbjct: 52 INEDVRRLQPSLFTNVDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAK--QQKV 109
Query: 132 KRLIHFSTCEVYGKTIGSF--LPKDSPL 157
KR I S+C +YG G+ K +PL
Sbjct: 110 KRYILPSSCSIYGFQKGAVDETAKTNPL 137
>TIGR_CMR|CBU_1837 [details] [associations]
symbol:CBU_1837 "NAD-dependent epimerase/dehydratase
family protein, putative" species:227377 "Coxiella burnetii RSA
493" [GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0044237
GO:GO:0003978 HOGENOM:HOG000168002 RefSeq:NP_820816.2
ProteinModelPortal:Q83AP4 PRIDE:Q83AP4 GeneID:1209749
KEGG:cbu:CBU_1837 PATRIC:17932405 OMA:RMRFDIV
ProtClustDB:CLSK915066 BioCyc:CBUR227377:GJ7S-1811-MONOMER
Uniprot:Q83AP4
Length = 346
Score = 102 (41.0 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 50/199 (25%), Positives = 85/199 (42%)
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG--PRMDFIPGIDGPSEGVPRVLACFS 241
+YA A + E+ I ++ T++R G PRM F I+G V +
Sbjct: 139 TYAKANEKAEKEILPLATDD-FTVTVMRQATVYGYSPRMRFDLAING------MVYGAWE 191
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQ 300
+ + PL + DG Q R ++++D + ++L+++ A NG I NVG ++
Sbjct: 192 DKCI---PL-MRDGTQ-YRPMVHVQDTTDVMVLLLQADASEINGQIINVGCEEQNYQLQP 246
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
L +++ EV + E E D + +Y D KRI +N Q W+
Sbjct: 247 LGQLIAEVVGQKLDEKIAIEWYGDPDHRSYYVSF--DKIKRI-----LNWQPQWDAAKGA 299
Query: 361 WDLLESTLTYQHRTYAEAI 379
+L+E Q + AE I
Sbjct: 300 VELIEKLKNNQLQKTAETI 318
Score = 75 (31.5 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 39/148 (26%), Positives = 68/148 (45%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH-RLNI 77
T+ + GAGG+IGS L K+L + H + A+D + G+D++ H L +
Sbjct: 5 TVLVTGAGGYIGSVLVPKLLNKGYH-VKAVDRF------------YFGSDKLSQHPHLEL 51
Query: 78 KHDS--RLE-GLIKMADLTINLAAICT-PAD--YNTRPLDTIYSNFIDALPVVKYCSENN 131
++ RL+ L D I+LAA+ P+ + + + + + + K +
Sbjct: 52 INEDVRRLQPSLFTNVDYVIDLAAVSNDPSGDIFEKATWEINHQARVQSATLAK--QQKV 109
Query: 132 KRLIHFSTCEVYGKTIGSF--LPKDSPL 157
KR I S+C +YG G+ K +PL
Sbjct: 110 KRYILPSSCSIYGFQKGAVDETAKTNPL 137
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 133 (51.9 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 39/147 (26%), Positives = 71/147 (48%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLN 76
+ I + G G+IGSH C + LL +KI+ +D + N I+ L + TG + +F++ N
Sbjct: 1 MAILITGGAGYIGSHTCVE-LLNNNYKIIVVDNLSNSSIESLNRVKEITGK-QFEFYKEN 58
Query: 77 IKHDSRLEGLI--KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KR 133
+ + ++ + + I+ A + T PL Y+N I A+ + ++N K
Sbjct: 59 VLNREKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKN 118
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQD 160
I S+ VYG +PK P+ ++
Sbjct: 119 FIFSSSATVYG------IPKTLPITEE 139
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 88 (36.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 29/131 (22%), Positives = 56/131 (42%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ---TGADRIQFHRLN 76
I + GA GFIGS + ++L E H + +D + L+ + T D + R+
Sbjct: 3 ILVTGAAGFIGSEMALRLLKEG-HSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERIR 61
Query: 77 IKHDSRLEGLIKM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KR 133
I+ +E + + ++ ++ AA P D I +N + + ++ + +
Sbjct: 62 IEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQH 121
Query: 134 LIHFSTCEVYG 144
L+ ST YG
Sbjct: 122 LVMASTSSAYG 132
Score = 87 (35.7 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 37/176 (21%), Positives = 71/176 (40%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV-LACFSNN 243
YA K E + ++ G+ T++R F+ GP G P + F++
Sbjct: 152 YAATKLASELIAHSHAHLYGVPTTVLRFFSVYGPW------------GRPDMAFFLFTDK 199
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
+ + QP+ + + G R F YI D +EA+ +++ P HI G+ + V +L
Sbjct: 200 IFKGQPIDVFNHGDLLRDFTYIDDLVEAIRRLMDTPPVVGNHIIR-GDSLSPVAPYRLVN 258
Query: 304 MMTEVYAKVSGEA-ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
+ ++ A+E + K D + D+ +++ G+ P T
Sbjct: 259 IGNASPVRLMDYIEAIEGAIGRKAEKNMIDMQPGDVKQTFADVRLLDALTGYTPDT 314
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 101 (40.6 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 44/157 (28%), Positives = 70/157 (44%)
Query: 20 ICMIGAGGFIGSHLCEKIL---LETPHKILALDVYNDKIKH--LLEPESQTGAD-RIQFH 73
I + G GFIGSH ++ + TP + + V DK+ + L ++ AD R F
Sbjct: 3 ILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVV-DKLGYGGNLRNLAEASADPRFSFV 61
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT-IYSNFIDALPVVKYCSENN- 131
R +I + +EGL+ D + AA T D + + SN + ++ ++
Sbjct: 62 RGDICDEGLIEGLMARHDTVAHFAAE-THVDRSVVASGPFVASNLVGTQVLLDAALRHHI 120
Query: 132 KRLIHFSTCEVYGKT-IGSFLPKDSPLRQDPAYYVLK 167
R +H ST EVYG GS+ + PL + Y K
Sbjct: 121 GRFLHVSTDEVYGSIDTGSWA-EGHPLAPNSPYAASK 156
Score = 72 (30.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 174 IFGSIEKQRWS----------YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFI 223
++GSI+ W+ YA +K + L A +G++ + R N GPR F
Sbjct: 131 VYGSIDTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQ-F- 188
Query: 224 PGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARAN 283
P + +P F LL + + G++ R ++++ D + L + RA
Sbjct: 189 -----PEKMIP----LFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALAL-GAGRA- 237
Query: 284 GHIFNVGNPHNEVTVRQLAEMMTE 307
G ++++G E T +L E++ E
Sbjct: 238 GEVYHIGGGW-EATNLELTEILLE 260
Score = 63 (27.2 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 29/144 (20%), Positives = 64/144 (44%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + +++ F LL + + G++ R ++++ D + L + RA G ++
Sbjct: 184 GPRQFPEKMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALAL-GAGRA-GEVY 241
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIP-DMT 346
++G E T +L E++ E + + V+ ++ G+D +R D +
Sbjct: 242 HIGGGW-EATNLELTEILLEACGAPASRISF------VTDRK----GHD---RRYSLDYS 287
Query: 347 IINQQLGWNPKTSLWDLLESTLTY 370
I +LG+ P+ D + T+ +
Sbjct: 288 KIAGELGYRPRVDFTDGIAETVAW 311
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 91 (37.1 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 44/177 (24%), Positives = 76/177 (42%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +K + L+ A GL + N GP F P + +P V+ N
Sbjct: 167 YSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGP-YHF------PEKLIPLVIL----NA 215
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEV----TVRQ 300
L +PL + G R ++Y++D A L M+ +A G +N+G HNE V
Sbjct: 216 LEGKPLPIYGKGDQIRDWLYVEDHARA-LHMVVTEGKA-GETYNIGG-HNEKKNLDVVFT 272
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYD-DSDKRIPDMTIINQQLGWNP 356
+ +++ E+ K + + E V+ + + Y D+ K I+++LGW P
Sbjct: 273 ICDLLDEIVPKAT---SYREQITYVADRPGHDRRYAIDAGK-------ISRELGWKP 319
Score = 80 (33.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 36/139 (25%), Positives = 59/139 (42%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD--VYNDKIKHLLEPESQTGADRIQFHRLNI 77
I + G GFIGS + I+ T ++ +D Y ++ L + ++R F +I
Sbjct: 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISE---SNRYNFEHADI 59
Query: 78 KHDSRLEGLIKM--ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV----KYCS--- 128
+ + + + D ++LAA T P I +N + ++ KY S
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119
Query: 129 ---ENNKRLIHFSTCEVYG 144
+NN R H ST EVYG
Sbjct: 120 EDKKNNFRFHHISTDEVYG 138
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 106 (42.4 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 40/151 (26%), Positives = 70/151 (46%)
Query: 228 GPSE---GVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANG 284
GP + G V+A F+ LL +P ++ G + R ++++ D ++A + A G
Sbjct: 178 GPRQDPHGEAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDA---FVRVSADVGG 234
Query: 285 HI-FNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIP 343
+ FN+G E + RQL + V A V G ++P EF+ D +
Sbjct: 235 GLRFNIGTG-KETSDRQLH---SAVAAAVGGP---DDP-------EFHPPRLGDLKRSCL 280
Query: 344 DMTIINQQLGWNPKTSLWDLLESTLTY-QHR 373
D+ + + LGW P+ L D + T+ Y +H+
Sbjct: 281 DIGLAERVLGWRPQIELADGVRRTVEYFRHK 311
Score = 59 (25.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALD 49
GA GFIGS L +++L + H ++ LD
Sbjct: 7 GAAGFIGSTLVDRLLADG-HSVVGLD 31
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 95 (38.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAD-RIQFHRL--NIK 78
+IG G IGSH +++L E +++ +Y++ ++ E +Q D R + + + +I
Sbjct: 11 VIGGAGLIGSHTVDRLLQEDVAEVI---IYDNFVRGTRENLAQALRDPRTKIYDIGGDIN 67
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC-SENNKRLIHF 137
L +K D + AA+ Y P +N V++ C ++ KRL+
Sbjct: 68 QTDILNTALKGVDGVFHFAALWLLQCYEY-PRSAFQTNIQGTFNVLETCVAQGVKRLVFS 126
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
S+ VYG + + + P Y K
Sbjct: 127 SSASVYGDALEEPMTEAHPFNSRTFYGATK 156
Score = 70 (29.7 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 34/147 (23%), Positives = 58/147 (39%)
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
R Y K E + A GL F +R N GPR D+ G V+
Sbjct: 149 RTFYGATKIAGEAMATAYHHRYGLPFVGLRYMNVYGPRQDY-RG------AYIAVIMKML 201
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQL 301
+ L + QP+ L G F+Y++D A + ++ A +NVG ++ +L
Sbjct: 202 DALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMK--ADTVDEYYNVGTG-KRTSILEL 258
Query: 302 AEMMTEVYAKVSGEAALEEPTVDVSSK 328
A+ + ++ L + T V ++
Sbjct: 259 AKEIQKITGTSDNIQFLPQGTTFVKNR 285
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 37/148 (25%), Positives = 72/148 (48%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G G+IGSH + L+E + + +D + N ++ + ES TG + I+FH ++I
Sbjct: 8 IMVTGGAGYIGSHTVIE-LIEAGYTPVIVDNLSNSSLEAIKRVESITGKE-IEFHHVDIM 65
Query: 79 HDSRLEGLIKMADL--TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLI 135
++ L+ + + ++ I+ A + + N PL +N L ++ ++ K+L+
Sbjct: 66 NEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKKLV 125
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAY 163
S+ VYG + +D PL Y
Sbjct: 126 FSSSATVYGDPHTVPITEDFPLSATNPY 153
>TAIR|locus:2051008 [details] [associations]
symbol:CRL1 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like
1" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0009809 "lignin biosynthetic process" evidence=ISS] [GO:0016621
"cinnamoyl-CoA reductase activity" evidence=ISS] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009408 "response to heat"
evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0046686
GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000167998 EMBL:AC002332 EMBL:AY120714
EMBL:AY084584 EMBL:BT000055 IPI:IPI00536249 PIR:D84747
RefSeq:NP_180917.1 UniGene:At.19951 ProteinModelPortal:O22809
SMR:O22809 STRING:O22809 PaxDb:O22809 PRIDE:O22809
EnsemblPlants:AT2G33590.1 GeneID:817925 KEGG:ath:AT2G33590
TAIR:At2g33590 InParanoid:O22809 OMA:DEACWSD PhylomeDB:O22809
ProtClustDB:CLSN2683499 ArrayExpress:O22809 Genevestigator:O22809
Uniprot:O22809
Length = 321
Score = 107 (42.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 50/202 (24%), Positives = 83/202 (41%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKI--LALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+C+ GAGGF+GS + + +LL + + D N+K HL + E D+++ + ++
Sbjct: 9 VCVTGAGGFLGSWVVD-LLLSKDYFVHGTVRDPDNEKYAHLKKLEK--AGDKLKLFKADL 65
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
L+ I ++A PA ++ I L V+K C E N KR+++
Sbjct: 66 LDYGSLQSAIAGCSGVFHVACPVPPASVPNPEVELIAPAVDGTLNVLKACIEANVKRVVY 125
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
S+ V + K+ L D A + D C + + W Y AK E
Sbjct: 126 VSS--VAAAFMNPMWSKNQVL--DEACW---SDQEYCK----KTENW-YCLAKTRAESEA 173
Query: 197 YAEGAENGLEFTIVRPFNWIGP 218
+ GL V P +GP
Sbjct: 174 FEFAKRTGLHLVSVCPTLVLGP 195
Score = 55 (24.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 23/88 (26%), Positives = 39/88 (44%)
Query: 296 VTVRQLAEMMTEVYAKVSGEA-------ALEEPTVDVSSKEFYG-----EGYDDSDKRIP 343
V VR +A+ + VY K E ++E V K FY + Y D++ R+
Sbjct: 228 VDVRDVAQALLLVYEKAEAEGRYICTSHTVKEEIVVEKLKSFYPHYNYPKKYIDAEDRVK 287
Query: 344 DMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+ Q+LGW + L++S +Y+
Sbjct: 288 VSSEKLQKLGWTYRPLEETLVDSVESYR 315
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 259 QRTFIYIKDAIEAVLLMIENPARANG-HIFNVGNPHNEVTVRQLAEMMTEV-YAKVSGEA 316
+R + ++D +A+LL+ E A A G +I E+ V +L Y K +A
Sbjct: 224 ERHLVDVRDVAQALLLVYEK-AEAEGRYICTSHTVKEEIVVEKLKSFYPHYNYPKKYIDA 282
Query: 317 ALEEPTVDVSSKEFYGEGY 335
E V VSS++ G+
Sbjct: 283 ---EDRVKVSSEKLQKLGW 298
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 88/373 (23%), Positives = 155/373 (41%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G G+IGSH ++L ++ +++ +D + +K L + QTG R+QF
Sbjct: 97 VLVTGGAGYIGSHAALRLLRDS-YRVTIVDNLSRGNLGAVKTLQQLFPQTG--RLQFIYA 153
Query: 76 NIKHDSRLEGLIK--MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-K 132
++ +E + D ++ AA+ + PL ++ + L V++ + + K
Sbjct: 154 DLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVK 213
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
+LI+ STC YG+ P+ P+ +D + +P Y AK++
Sbjct: 214 KLIYSSTCATYGE------PEKMPITEDTPQVPI----NP------------YGKAKKMA 251
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIG--P--RMDFIPGIDGPSEGVPRVL-ACF--SNNLL 245
E +I + + I+R FN IG P R+ P + +G R+ ACF + +
Sbjct: 252 EDMILDFSKNSDMAVMILRYFNVIGSDPGGRLGEAPRPELREQG--RISGACFDAARGFI 309
Query: 246 RRQPLKLVD----GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQL 301
+K D G R +I + D ++A + +E I+NVG R +
Sbjct: 310 PGLQVKGTDYKTSDGTCIRDYIDVTDLVDAHVKALEKAQPRKVGIYNVGTGKG----RSV 365
Query: 302 AEMMTEVYAKVSGEAALEEPTVDVSSKE--FYGEGYDDSDKRIPDMTIINQQLGWNPK-T 358
E + E K +G E VD + Y E Y D K + D L W + T
Sbjct: 366 KEFV-EACKKATGV----EIKVDFLPRRPGDYAEVYSDPTKILKD-------LNWTARFT 413
Query: 359 SLWDLLESTLTYQ 371
+L D L+ +Q
Sbjct: 414 NLQDSLQVAWRWQ 426
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 98 (39.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/129 (24%), Positives = 61/129 (47%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ + G G+IGSH C + LL+ H ++ LD + N K + +L + G F +I+
Sbjct: 3 VLVTGGSGYIGSHTCVQ-LLQNGHDVIILDNLCNSK-RSVLPVIERLGGKHPTFVEGDIR 60
Query: 79 HDSRLEGLIK--MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC-SENNKRLI 135
+++ + ++ D I+ A + + +PL+ +N L ++ + N K I
Sbjct: 61 NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 136 HFSTCEVYG 144
S+ VYG
Sbjct: 121 FSSSATVYG 129
Score = 64 (27.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 41/199 (20%), Positives = 81/199 (40%)
Query: 185 YACAKQLIERLIY-AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
Y +K ++E+++ + A+ ++R FN +G G D P +G+P L +
Sbjct: 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGED-P-QGIPNNLMPYIAQ 206
Query: 244 LL--RRQPLKL------VDGGQSQRTFIYIKDAIEAVLLMIENPARANG-HIFNVGNPHN 294
+ RR L + + G R +I++ D + ++ +E A G HI+N+G
Sbjct: 207 VAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLG---- 262
Query: 295 EVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
V + ++K G+ P + F D D + +++L W
Sbjct: 263 -AGVGNSVLDVVNAFSKACGK-----PV----NYHFAPRREGDLPAYWADASKADRELNW 312
Query: 355 NPKTSLWDLLESTLTYQHR 373
+L ++ + T +Q R
Sbjct: 313 RVTRTLDEMAQDTWHWQSR 331
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 83 (34.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 42/141 (29%), Positives = 65/141 (46%)
Query: 165 VLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIP 224
VL ED P + S+ Y +K E LI A GL+ T+ R N +G R
Sbjct: 131 VLDEDYGPLLPISL------YGASKLAGEGLISAYSHLYGLKATMFRFANIVGSRRH--- 181
Query: 225 GIDGPSEGVPRVLACFSNNLLRRQPLKLV---DGGQSQRTFIYIKDAIEAVLLMIENPAR 281
GV + F + L R+ P L+ DG QS + ++++ D + +LL E +
Sbjct: 182 ------SGV---IYDFVSRL-RQNPSSLLVLGDGSQS-KPYLHVSDCVAGMLLGFEKSTK 230
Query: 282 ANGHIFNVGNPHNEVTVRQLA 302
G ++N+G P + V VR +A
Sbjct: 231 NLG-LYNLGTP-DSVAVRDIA 249
Score = 78 (32.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGA-DRIQFHRLNI 77
+ + G GFIGSHL + LL K+ +D + N +++L + G D+++ N+
Sbjct: 4 VLVTGGCGFIGSHLVDA-LLSQGFKVRVMDNLSNGSLENL-----KCGQRDKLEIINGNL 57
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT---IYSNFIDALPVVKYCSENN-KR 133
L+ +K + +LAA A+ DT + +N + +++ N R
Sbjct: 58 TDKFLLDSAVKGCETVFHLAA---HANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVDR 114
Query: 134 LIHFSTCEVYGKTIGSFLPKD-SPL 157
L+ S+ VYG++ + L +D PL
Sbjct: 115 LVFASSAAVYGESGLTVLDEDYGPL 139
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 73/275 (26%), Positives = 118/275 (42%)
Query: 106 NTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYV 165
NT P D IY N + ++ +N+ + F G + PK L + P
Sbjct: 73 NTYPADFIYQNMMIESNIIHAAHQNDVNKLLF-----LGSSC--IYPK---LAKQP---- 118
Query: 166 LKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPG 225
+ E S + G++E YA AK +L + + G ++ V P N GP +F P
Sbjct: 119 MAE--SELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS 176
Query: 226 IDGPSEGVPRVLACFSNNLLRRQPLKLVDG-GQSQRTFIYIKD-AIEAVLLM-------I 276
S +P +L F + P +V G G R F+++ D A ++ +M +
Sbjct: 177 ---NSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWL 233
Query: 277 ENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYD 336
EN HI NVG + T+R+LA+ + +V G + +SK D
Sbjct: 234 ENTQPMLSHI-NVGTGV-DCTIRELAQTIAKVVG-YKGRVVFD------ASKP------D 278
Query: 337 DSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+ +++ D+T ++Q LGW + SL L ST YQ
Sbjct: 279 GTPRKLLDVTRLHQ-LGWYHEISLEAGLAST--YQ 310
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 85 (35.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 33/133 (24%), Positives = 64/133 (48%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL-EPESQTGADR-IQFHR 74
P T + G GFIGS+L E+ LL+ ++ LD + +H L E +S +++ ++F
Sbjct: 15 PKTWLITGVAGFIGSNLLEQ-LLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSF 73
Query: 75 LN--IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN- 131
+N I+ + E ++ D ++ AA+ + P+ T +N L +++ E
Sbjct: 74 INGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEV 133
Query: 132 KRLIHFSTCEVYG 144
K + ++ YG
Sbjct: 134 KSFTYAASSSTYG 146
Score = 75 (31.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
YA K + E G E +R FN G R D P+ V+ +++++
Sbjct: 165 YAVTKYVNELYASVYARTYGFETIGLRYFNVFGRRQD-------PNGAYAAVIPKWTSSM 217
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289
++ + + + G++ R F YI + ++ +L + A ++NV
Sbjct: 218 IKGEDVFINGDGETSRDFCYIDNVVQMNILAATAASEAKNEVYNV 262
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 85 (35.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 33/133 (24%), Positives = 64/133 (48%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLL-EPESQTGADR-IQFHR 74
P T + G GFIGS+L E+ LL+ ++ LD + +H L E +S +++ ++F
Sbjct: 15 PKTWLITGVAGFIGSNLLEQ-LLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSF 73
Query: 75 LN--IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN- 131
+N I+ + E ++ D ++ AA+ + P+ T +N L +++ E
Sbjct: 74 INGDIRDYAICEAVVNGVDYVLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEV 133
Query: 132 KRLIHFSTCEVYG 144
K + ++ YG
Sbjct: 134 KSFTYAASSSTYG 146
Score = 75 (31.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 23/105 (21%), Positives = 46/105 (43%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
YA K + E G E +R FN G R D P+ V+ +++++
Sbjct: 165 YAVTKYVNELYASVYARTYGFETIGLRYFNVFGRRQD-------PNGAYAAVIPKWTSSM 217
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289
++ + + + G++ R F YI + ++ +L + A ++NV
Sbjct: 218 IKGEDVFINGDGETSRDFCYIDNVVQMNILAATAASEAKNEVYNV 262
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 93 (37.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 36/136 (26%), Positives = 61/136 (44%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPH-KILALD--VYNDKIKHLLEPESQTGADRIQFH 73
P + + G GFIGS+ I P + +D + N +++ E S + R +
Sbjct: 5 PKNVVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAE--SVRNSPRYKLV 62
Query: 74 RLNIKHDSRLEGLIKM--ADLTINLAAICTPADYNTRPLDTIYSN---FIDALPVVKYCS 128
+IK+++ + + + D I+ AA CT + + +N FI L V+
Sbjct: 63 LTDIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYG 122
Query: 129 ENNKRLIHFSTCEVYG 144
+ KR +H ST EVYG
Sbjct: 123 KI-KRFVHISTDEVYG 137
Score = 73 (30.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 38/160 (23%), Positives = 66/160 (41%)
Query: 226 IDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGH 285
I GP++ +V+ F R + G+ R+++++ DA + + E + H
Sbjct: 190 IYGPNQWDVKVVPRFIEIAKVRGEYTIQGSGKQLRSWLFVDDASAGLKAVCE---KGELH 246
Query: 286 -IFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPD 344
I+N+G + E V LA+ + E G A EP K Y+D + +
Sbjct: 247 EIYNLGT-YYEKNVADLAKTIQEEVDLQLGRA--HEPP---KYKSIPDRPYNDL-RYLIS 299
Query: 345 MTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVA 384
+ LGW P TS D + T+ + + +K VA
Sbjct: 300 IEKAKNDLGWEPTTSFDDGMRHTVASALKEHKH-VKMHVA 338
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 82 (33.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 37/158 (23%), Positives = 69/158 (43%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G G+IGSH+ ++ L+ K+L +D + K ++ ++ F N+
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKN-EKVLVVDNLSKGHKKAVDTRAKLIVG--DFGDENLL- 57
Query: 80 DSRLEGLIKMADL--TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
LE + K D+ I++AA + ++P N L ++K + N K+++
Sbjct: 58 ---LE-IFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVF 113
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
ST VYG+ + +D P + Y K C+
Sbjct: 114 SSTAAVYGEPEKWPITEDFPQKPTNVYGYSKLVIEQCL 151
Score = 77 (32.2 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 47/189 (24%), Positives = 79/189 (41%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIG--PRMDFIPGIDGPSEGVPRVLACFSN 242
Y +K +IE+ + +G + +R FN G P D G D E ++
Sbjct: 140 YGYSKLVIEQCLEWYRQIHGFNYVSLRYFNAAGADPSGDI--GEDHNPE--THLIPLIFK 195
Query: 243 NLLRRQPLKLVDG-------GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNE 295
+L Q V G G R +I++ D EA +L + + ++N+GN
Sbjct: 196 VILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLAEAHILALNKLNKDESGVYNLGNQKG- 254
Query: 296 VTVRQL---AEMMTEVYAKVS-GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
+V+++ AE +T V KV G+ +P V V+S E + + + K TI+
Sbjct: 255 FSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLVASSEKIQKELNFTPKFGDIKTIVQTA 314
Query: 352 LGW---NPK 357
W NP+
Sbjct: 315 WEWHKNNPR 323
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 89 (36.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 40/144 (27%), Positives = 61/144 (42%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPH-KILALD--VYNDKIKHLLEPESQTGADRIQFHRLN 76
I + G GFIGS+ + P + LD Y +L E G DR++ +
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANL---EEILG-DRVELVVGD 62
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
I ++ L AD ++ AA + P IY+NF+ +++ + + R H
Sbjct: 63 IADSELVDKLAAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRFHH 122
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQD 160
ST EVYG D PLR+D
Sbjct: 123 VSTDEVYG---------DLPLRED 137
Score = 70 (29.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GP + + + + N+L KL G++ R +I+ D V ++ R G +
Sbjct: 193 GPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTK-GRI-GETY 250
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
+G E +++ E++ E K+S + D + G+D + D T
Sbjct: 251 LIG-ADGEKNNKEVLELILE---KMSQPKNAYDHVTDRA-------GHDL--RYAIDSTK 297
Query: 348 INQQLGWNPK-TSLWDLLESTLTY--QHRTYAEAIKQAV 383
+ ++LGW P+ T+ + LE T+ + +H + +A K+AV
Sbjct: 298 LREELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEAV 336
>TAIR|locus:2165427 [details] [associations]
symbol:DFR "dihydroflavonol 4-reductase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0042406 "extrinsic to
endoplasmic reticulum membrane" evidence=TAS] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA;IMP;TAS] [GO:0045552 "dihydrokaempferol 4-reductase
activity" evidence=IMP;TAS] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00009
InterPro:IPR016040 EMBL:CP002688 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009718 GO:GO:0042406
EMBL:AB007647 EMBL:M86359 EMBL:AB033294 EMBL:AJ251982
IPI:IPI00523540 PIR:JQ1688 RefSeq:NP_199094.1 UniGene:At.23537
UniGene:At.74948 ProteinModelPortal:P51102 SMR:P51102 IntAct:P51102
STRING:P51102 PaxDb:P51102 PRIDE:P51102 EnsemblPlants:AT5G42800.1
GeneID:834291 KEGG:ath:AT5G42800 TAIR:At5g42800 InParanoid:P51102
KO:K13082 OMA:MYFVSKS PhylomeDB:P51102 ProtClustDB:PLN02650
Genevestigator:P51102 GermOnline:AT5G42800 GO:GO:0045552
Uniprot:P51102
Length = 382
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 54/207 (26%), Positives = 96/207 (46%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILAL--DVYN-DKIKHLLE-PESQTGADRIQFHR 74
T+C+ GA GFIGS L + LLE + + A D N K++HLL+ P ++T + +
Sbjct: 7 TVCVTGASGFIGSWLVMR-LLERGYFVRATVRDPGNLKKVQHLLDLPNAKT---LLTLWK 62
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTR-PLDTIYSNFIDA-LPVVKYCSENNK 132
++ + + I D ++A TP D+ ++ P + + ++ L ++K C + K
Sbjct: 63 ADLSEEGSYDDAINGCDGVFHVA---TPMDFESKDPENEVIKPTVNGMLGIMKACVKA-K 118
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR-WSYACAKQL 191
+ F V+ + G+ ++ Q Y + D S F +K W Y +K L
Sbjct: 119 TVRRF----VFTSSAGTVNVEE---HQKNVYD--ENDWSDLEFIMSKKMTGWMYFVSKTL 169
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGP 218
E+ + E GL+F + P +GP
Sbjct: 170 AEKAAWDFAEEKGLDFISIIPTLVVGP 196
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 108 (43.1 bits), Expect = 0.00046, P = 0.00046
Identities = 40/139 (28%), Positives = 59/139 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 35 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 90
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 91 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 141
Query: 261 TFIYIKDAIEA-VLLMIEN 278
F Y+ D + V LM N
Sbjct: 142 AFQYVSDLVNGLVALMNSN 160
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 88 (36.0 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G GFIGSHL + + + KI+ LD D ++ +F++ NI
Sbjct: 12 ILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKL-DYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 79 HDSRLEGLIKMA--DLTINLAAICTPADYNTRP-LDTIYSNFIDALPVVKYCSENN-KRL 134
LE + + D+ I+LAA T D + + + +N + +++ C K+
Sbjct: 71 DSELLENIFEKEKIDIVIHLAAY-THVDNSFKQSIKFTENNILGTHYLLETCKNYKLKKF 129
Query: 135 IHFSTCEVYG 144
I+ ST EVYG
Sbjct: 130 IYVSTDEVYG 139
Score = 73 (30.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 18/83 (21%), Positives = 42/83 (50%)
Query: 226 IDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGH 285
I GP + +++ F N LL + + G++ R ++YI D + A +++ G+
Sbjct: 199 IYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKNTRNYLYIDDIVSAFDIILRKGEI--GN 256
Query: 286 IFNVGNPHNEVTVRQLAEMMTEV 308
++N+G E++ +A+ + +
Sbjct: 257 VYNIGTDF-EISNLDVAKKIINI 278
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 98 (39.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G G+IGSH C +++ ++ ++YN K+ L E G R QF + +I+
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV-RPQFVQGDIRD 61
Query: 80 DSRLEGLIKMADL--TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
+ L L++ ++ ++ A + + +PL+ +N L +V E K L+
Sbjct: 62 KALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLVF 121
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
S+ VYG+ + + P + Y K C+
Sbjct: 122 SSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECL 159
Score = 58 (25.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 43/207 (20%), Positives = 78/207 (37%)
Query: 185 YACAKQLIER-LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
Y +K ++E L + A T++R FN +G G D P +G+P L F
Sbjct: 148 YGRSKLMVEECLTDFQKANPDWSITLLRYFNPVGSHPSGELGED-P-QGIPNNLMPFVTQ 205
Query: 244 LL--RRQPLKLVDG------GQSQRTFIYIKDAIEAVLLMIENPARANG-HIFNVGNPHN 294
+ RR+ L + G R +I++ D + + ++ G HI+N+G
Sbjct: 206 VAVGRREYLSVFGSDYPTKDGTGVRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGTGKG 265
Query: 295 EVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
+V + + + ++ D++ E++ D T Q LGW
Sbjct: 266 -YSVLDVVKAFETASGRTVPYKLVDRRPGDIA--EYWA-----------DPTKAAQDLGW 311
Query: 355 NPKTSLWDLLESTLTYQHRT---YAEA 378
+L + + +Q Y EA
Sbjct: 312 KATRNLHTMAQDAWCWQSNNPQGYPEA 338
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 98 (39.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 36/158 (22%), Positives = 70/158 (44%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G G+IGSH C +++ ++ ++YN K+ L E G R QF + +I+
Sbjct: 3 VLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGV-RPQFVQGDIRD 61
Query: 80 DSRLEGLIKMADL--TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIH 136
+ L L++ ++ ++ A + + +PL+ +N L +V E K L+
Sbjct: 62 KALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVKSLVF 121
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
S+ VYG+ + + P + Y K C+
Sbjct: 122 SSSATVYGEPTSVPITESFPTKAANPYGRSKLMVEECL 159
Score = 58 (25.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 43/207 (20%), Positives = 78/207 (37%)
Query: 185 YACAKQLIER-LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
Y +K ++E L + A T++R FN +G G D P +G+P L F
Sbjct: 148 YGRSKLMVEECLTDFQKANPDWSITLLRYFNPVGSHPSGELGED-P-QGIPNNLMPFVTQ 205
Query: 244 LL--RRQPLKLVDG------GQSQRTFIYIKDAIEAVLLMIENPARANG-HIFNVGNPHN 294
+ RR+ L + G R +I++ D + + ++ G HI+N+G
Sbjct: 206 VAVGRREYLSVFGSDYPTKDGTGVRDYIHVMDLADGHIAALKKVGTCAGLHIYNLGTGKG 265
Query: 295 EVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
+V + + + ++ D++ E++ D T Q LGW
Sbjct: 266 -YSVLDVVKAFETASGRTVPYKLVDRRPGDIA--EYWA-----------DPTKAAQDLGW 311
Query: 355 NPKTSLWDLLESTLTYQHRT---YAEA 378
+L + + +Q Y EA
Sbjct: 312 KATRNLHTMAQDAWCWQSNNPQGYPEA 338
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 108 (43.1 bits), Expect = 0.00073, P = 0.00073
Identities = 40/139 (28%), Positives = 59/139 (42%)
Query: 145 KTIGS--FLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEG 200
K +G+ L S + DP + ED +G + R Y K++ E + YA
Sbjct: 35 KRVGARLLLASTSEVYGDPEVHPQSED----YWGHVNPIGPRACYDEGKRVAETMCYAYM 90
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ G+E + R FN GPRM G RV++ F L+ +PL + G R
Sbjct: 91 KQEGVEVRVARIFNTFGPRMHMNDG---------RVVSNFILQALQGEPLTVYGSGSQTR 141
Query: 261 TFIYIKDAIEA-VLLMIEN 278
F Y+ D + V LM N
Sbjct: 142 AFQYVSDLVNGLVALMNSN 160
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 97 (39.2 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 40/141 (28%), Positives = 66/141 (46%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG-ADRIQFHRLNIK 78
+ + G GFIG++ L E + ++ V D + + ES ADRI+ + +I
Sbjct: 3 LLVTGGAGFIGANFVHLALREA--RTSSITVL-DALTYAGSRESLAPVADRIRLVQGDIT 59
Query: 79 HDSRLEG-LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
D+ L G L+ +D ++ AA + P ++SN + +++ +N RL H
Sbjct: 60 -DAALVGDLVAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNVRLHHV 118
Query: 138 STCEVYGKTIGSFLPKDSPLR 158
ST EVYG L D+P R
Sbjct: 119 STDEVYGD-----LELDNPAR 134
Score = 58 (25.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 36/149 (24%), Positives = 60/149 (40%)
Query: 160 DPAYYVLKEDASPCIFGSIEKQRWS--YACAKQLIERLIYAEGAENGLEFTIVRPFNWIG 217
D Y L+ D +P F S Y+ K + L+ A G+ TI N G
Sbjct: 121 DEVYGDLELD-NPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNCSNNYG 179
Query: 218 PRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIE 277
P + +PR + +N L R+P KL G + R +I++ D AV ++
Sbjct: 180 PYQHV-------EKFIPRQI---TNVLTGRRP-KLYGAGANVRDWIHVDDHNSAVWRILT 228
Query: 278 NPARANGHIFNVGNPHNEVTV-RQLAEMM 305
+ ++ N +TV R + ++M
Sbjct: 229 DGTIGRTYLIGAECERNNLTVMRTILKLM 257
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 390 390 0.00094 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 69
No. of states in DFA: 612 (65 KB)
Total size of DFA: 260 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.49u 0.08s 30.57t Elapsed: 00:00:01
Total cpu time: 30.50u 0.08s 30.58t Elapsed: 00:00:01
Start: Sat May 11 03:13:51 2013 End: Sat May 11 03:13:52 2013