BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016370
(390 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356543530|ref|XP_003540213.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Glycine max]
Length = 387
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/386 (91%), Positives = 373/386 (96%)
Query: 4 ASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES 63
AS R+DLDG PIKP+TICMIGAGGFIGSHLCEK++ ETPH +LALDVYNDKIKHLLEP +
Sbjct: 2 ASSRVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETPHSVLALDVYNDKIKHLLEPHT 61
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
A RIQFHRLNIKHDSRLEGLIKM+DLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 62 LPWASRIQFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPV 121
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED SPCIFGSIEKQRW
Sbjct: 122 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRW 181
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
SYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN
Sbjct: 182 SYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 241
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
LLR +PLKLVDGGQSQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNP+NEVTVRQLAE
Sbjct: 242 LLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAE 301
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
MMT+VY+KVSGEA LE+PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDL
Sbjct: 302 MMTQVYSKVSGEAPLEKPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDL 361
Query: 364 LESTLTYQHRTYAEAIKQAVAKPVAS 389
LESTLTYQHRTYAEA+K+ +AKPVAS
Sbjct: 362 LESTLTYQHRTYAEAVKKVIAKPVAS 387
>gi|211906520|gb|ACJ11753.1| UDP-D-apiose/UPD-D-xylose synthetase [Gossypium hirsutum]
Length = 386
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/385 (92%), Positives = 371/385 (96%)
Query: 5 SVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ 64
+ R DLDGRPIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLEP+S
Sbjct: 2 ATRTDLDGRPIKPLTICMIGAGGFIGSHLCEKLMSETPHKVLALDVYNDKIKHLLEPDSL 61
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
A RIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV
Sbjct: 62 PWAGRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 121
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED SPCIFGSIEKQRWS
Sbjct: 122 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDTSPCIFGSIEKQRWS 181
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
YACAKQLIERLIYAEGAE GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL
Sbjct: 182 YACAKQLIERLIYAEGAETGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 241
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304
LRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQLAEM
Sbjct: 242 LRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPDRANGHIFNVGNPNNEVTVRQLAEM 301
Query: 305 MTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
MT+VYAKVSGE LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDLL
Sbjct: 302 MTKVYAKVSGETVLESPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL 361
Query: 365 ESTLTYQHRTYAEAIKQAVAKPVAS 389
ESTLTYQHRTYAEAIK+++AKP AS
Sbjct: 362 ESTLTYQHRTYAEAIKKSIAKPSAS 386
>gi|297849130|ref|XP_002892446.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata subsp.
lyrata]
gi|297338288|gb|EFH68705.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/389 (91%), Positives = 373/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGAGRLDLDGKPIKPITICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
>gi|18390863|ref|NP_563807.1| UDP-apiose/xylose synthase [Arabidopsis thaliana]
gi|6579211|gb|AAF18254.1|AC011438_16 T23G18.6 [Arabidopsis thaliana]
gi|24899785|gb|AAN65107.1| similar to dihydroflavonol reductase [Arabidopsis thaliana]
gi|332190139|gb|AEE28260.1| UDP-apiose/xylose synthase [Arabidopsis thaliana]
Length = 389
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/389 (91%), Positives = 373/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
>gi|225465764|ref|XP_002266630.1| PREDICTED: bifunctional polymyxin resistance protein ArnA [Vitis
vinifera]
gi|296087442|emb|CBI34031.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/389 (91%), Positives = 375/389 (96%), Gaps = 1/389 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA A+ RLDLDG IKP+TICMIGAGGFIGSHLCEK++ ET HK+LA+DVYNDKI+HLLE
Sbjct: 1 MASAA-RLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVYNDKIRHLLE 59
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P + +DRIQFHR+NIKHDSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 60 PAAHPWSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDA 119
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY+LKEDASPCIFGSIEK
Sbjct: 120 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYLLKEDASPCIFGSIEK 179
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 180 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 239
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGGQSQRTF+YIKDAIEAVLLMI+NP RANGHIFNVGNP+NE TV+Q
Sbjct: 240 SNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIDNPGRANGHIFNVGNPNNEATVKQ 299
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE +LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 300 LAEMMTEVYAKVSGEPSLEVPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSL 359
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEAIKQA+AKPVAS
Sbjct: 360 WDLLESTLTYQHRTYAEAIKQAIAKPVAS 388
>gi|21594350|gb|AAM65998.1| putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana]
Length = 389
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/389 (90%), Positives = 373/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A++ PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIDSPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
>gi|297822499|ref|XP_002879132.1| UDP-D-apiose/UDP-D-xylose synthase 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297324971|gb|EFH55391.1| UDP-D-apiose/UDP-D-xylose synthase 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/389 (90%), Positives = 374/389 (96%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + R+DLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGANRVDLDGKPIKPITICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ + RIQFHR+NIKHDSRLEGLIKMADL INLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVEWSGRIQFHRINIKHDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLR+DPA+YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLREDPAFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH+TYAEA+K+A +KPVAS
Sbjct: 361 WDLLESTLTYQHKTYAEAVKKATSKPVAS 389
>gi|347664493|gb|AEP17007.1| UDP-D-apiose/UPD-D-xylose synthetase [Vitis vinifera]
Length = 388
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/389 (90%), Positives = 374/389 (96%), Gaps = 1/389 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA A+ RLDLDG IKP+TICMIGAGGFIGSHLCEK+ ET HK+LA+DVYNDKI+HLLE
Sbjct: 1 MASAA-RLDLDGNAIKPMTICMIGAGGFIGSHLCEKLTAETMHKVLAVDVYNDKIRHLLE 59
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P + + +DRIQFHR+NIKHDSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 60 PATHSWSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDA 119
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYY+LKEDASPCIFGSIEK
Sbjct: 120 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYLLKEDASPCIFGSIEK 179
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 180 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 239
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLR +PLKLVDGGQSQRTF+YIKDAIEAVLLMI+NP RANGHIFNVGNP+NE TV+Q
Sbjct: 240 SNNLLRHEPLKLVDGGQSQRTFVYIKDAIEAVLLMIDNPGRANGHIFNVGNPNNEATVKQ 299
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE +LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 300 LAEMMTEVYAKVSGEPSLEVPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSL 359
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEAIK+A+AKPVAS
Sbjct: 360 WDLLESTLTYQHRTYAEAIKEAIAKPVAS 388
>gi|15226264|ref|NP_180353.1| UDP-D-apiose/UDP-D-xylose synthase 1 [Arabidopsis thaliana]
gi|13605497|gb|AAK32742.1|AF361574_1 At2g27860/F15K20.4 [Arabidopsis thaliana]
gi|3860247|gb|AAC73015.1| putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana]
gi|21555529|gb|AAM63878.1| putative dTDP-glucose 4-6-dehydratase [Arabidopsis thaliana]
gi|24111293|gb|AAN46770.1| At2g27860/F15K20.4 [Arabidopsis thaliana]
gi|38231566|gb|AAR14687.1| UDP-D-apiose/UDP-D-xylose synthase [Arabidopsis thaliana]
gi|52354277|gb|AAU44459.1| hypothetical protein AT2G27860 [Arabidopsis thaliana]
gi|60547725|gb|AAX23826.1| hypothetical protein At2g27860 [Arabidopsis thaliana]
gi|330252960|gb|AEC08054.1| UDP-D-apiose/UDP-D-xylose synthase 1 [Arabidopsis thaliana]
Length = 389
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/389 (89%), Positives = 372/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + R+DLDG+PI+P+TICMIGAGGFIGSHLCEK+L ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGANRVDLDGKPIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ + RIQFHR+NIKHDSRLEGL+KMADL INLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVEWSGRIQFHRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLR DPA+YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTF+YI DAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTEVYAKVSGEGAIESPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEA+K+A +KPVAS
Sbjct: 361 WDLLESTLTYQHRTYAEAVKKATSKPVAS 389
>gi|14596185|gb|AAK68820.1| similar to dihydroflavonol reductase [Arabidopsis thaliana]
Length = 389
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/389 (90%), Positives = 371/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + RLDLDG+PIKP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLE
Sbjct: 1 MANGADRLDLDGKPIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P++ A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDTVQWAGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLRQDP +YVLKED SPCIFGSIEK
Sbjct: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGG+SQRTFIYIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNNLLRREPLKLVDGGESQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE A+E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLG PKTSL
Sbjct: 301 LAEMMTEVYAKVSGETAIESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGCTPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQH TYAEAIK+A +KPVAS
Sbjct: 361 WDLLESTLTYQHTTYAEAIKKATSKPVAS 389
>gi|225436371|ref|XP_002270884.1| PREDICTED: bifunctional polymyxin resistance protein ArnA [Vitis
vinifera]
gi|297734864|emb|CBI17098.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/389 (91%), Positives = 372/389 (95%), Gaps = 1/389 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA A+ RLDLDG IKP+TICMIGAGGFIGSHLCEK++ ET HK+LA+DVY+DKIKHLLE
Sbjct: 1 MASAA-RLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVYSDKIKHLLE 59
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P + +DRIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 60 PSTHPWSDRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 119
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPL QDP YYVLKEDASPCIFG IEK
Sbjct: 120 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLWQDPTYYVLKEDASPCIFGPIEK 179
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAEN LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 180 QRWSYACAKQLIERLIYAEGAENDLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 239
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLR +PLKLVDGGQSQRTF+YIKDAIEAVLLMI+NPARANGHIFNVGNP+NEVTVRQ
Sbjct: 240 SNNLLRHEPLKLVDGGQSQRTFVYIKDAIEAVLLMIDNPARANGHIFNVGNPNNEVTVRQ 299
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE +LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 300 LAEMMTEVYAKVSGEPSLEVPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSL 359
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEAIKQA+AKPVAS
Sbjct: 360 WDLLESTLTYQHRTYAEAIKQAIAKPVAS 388
>gi|347664491|gb|AEP17006.1| UDP-D-apiose/UPD-D-xylose synthetase [Vitis vinifera]
Length = 388
Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/389 (90%), Positives = 372/389 (95%), Gaps = 1/389 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA A+ RLDLDG IKP+TICMIGAGGFIGSHLCEK++ ET HK+LA+DVYNDKI+HLLE
Sbjct: 1 MASAA-RLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVYNDKIRHLLE 59
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P + +DRIQFHR+NIKHDSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 60 PATHPWSDRIQFHRINIKHDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDA 119
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTI SFLPKDSPLRQDPAYY+LKEDASPCIFGSIEK
Sbjct: 120 LPVVKYCSENNKRLIHFSTCEVYGKTIRSFLPKDSPLRQDPAYYLLKEDASPCIFGSIEK 179
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPS GVPRVLACF
Sbjct: 180 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSGGVPRVLACF 239
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLR +PLKLVDGGQSQRTF+YIKDAIEAVLLMI+NP RANGHIFNVGNP+NE TVRQ
Sbjct: 240 SNNLLRHEPLKLVDGGQSQRTFVYIKDAIEAVLLMIDNPGRANGHIFNVGNPNNEATVRQ 299
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMTEVYAKVSGE +LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 300 LAEMMTEVYAKVSGEPSLEVPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSL 359
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEAIKQA+AKPVAS
Sbjct: 360 WDLLESTLTYQHRTYAEAIKQAIAKPVAS 388
>gi|224132100|ref|XP_002328185.1| predicted protein [Populus trichocarpa]
gi|118485858|gb|ABK94776.1| unknown [Populus trichocarpa]
gi|222837700|gb|EEE76065.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 741 bits (1914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/389 (89%), Positives = 371/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA + VR+DLDG+PI P+TICMIGAGGFIGSHLCEKIL ET HKILALDVYNDKIKHLLE
Sbjct: 1 MASSVVRVDLDGKPINPLTICMIGAGGFIGSHLCEKILNETQHKILALDVYNDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P+S A RIQFHR+NIKHDSRLEGLIKM+DLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDSLPWAGRIQFHRINIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPV KYCSEN KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK
Sbjct: 121 LPVAKYCSENGKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SN LLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENP+RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNALLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPSRANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMT VYA VSGE ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 301 LAEMMTAVYANVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLL+STLTYQH+TYAEAIK+ +++P S
Sbjct: 361 WDLLDSTLTYQHKTYAEAIKKVMSQPTTS 389
>gi|224102997|ref|XP_002312885.1| predicted protein [Populus trichocarpa]
gi|222849293|gb|EEE86840.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/389 (89%), Positives = 370/389 (95%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA ++VR++LDG+PI +TI MIGAGGFIGSHLCEKIL ETPHKILALDVY+DKIKHLLE
Sbjct: 1 MAASTVRINLDGKPINQLTILMIGAGGFIGSHLCEKILQETPHKILALDVYSDKIKHLLE 60
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P+S A RIQFHR+NIKHDSRLEGLIKM+DLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 61 PDSLEWAGRIQFHRINIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDA 120
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSEN KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK
Sbjct: 121 LPVVKYCSENGKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SN LLRR+ LKLVDGG+SQRTF+YIKDAIEAVLLMIENP RANGHIFNVGNP+NEVTVRQ
Sbjct: 241 SNALLRREQLKLVDGGESQRTFVYIKDAIEAVLLMIENPDRANGHIFNVGNPNNEVTVRQ 300
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMT VYA VSGE ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTS+
Sbjct: 301 LAEMMTAVYANVSGEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSV 360
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLL+STLTYQH+TYAEA+K+ ++KP S
Sbjct: 361 WDLLDSTLTYQHKTYAEAVKKVISKPTTS 389
>gi|449456074|ref|XP_004145775.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Cucumis sativus]
gi|449510839|ref|XP_004163778.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Cucumis sativus]
Length = 389
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/384 (89%), Positives = 368/384 (95%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R+DL G P+KP+TICMIGAGGFIGSHLCEK++ ETPHK+LALDVYNDKIKHLLEP++
Sbjct: 6 RVDLSGNPVKPITICMIGAGGFIGSHLCEKLMAETPHKVLALDVYNDKIKHLLEPDTLPW 65
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
ADRIQFHRLNIK+DSRLE LI+MADLTINLAAICTPADYNTRPLDTIYSNFIDA+PVVKY
Sbjct: 66 ADRIQFHRLNIKNDSRLESLIRMADLTINLAAICTPADYNTRPLDTIYSNFIDAIPVVKY 125
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
CS N+KRLIHFSTCEVYGKTIGSFLPKDSPLRQDP+YYVL ED SPCIFGSIEKQRWSYA
Sbjct: 126 CSGNSKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPSYYVLSEDTSPCIFGSIEKQRWSYA 185
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQLIERLIYAEGAENGL+FTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR
Sbjct: 186 CAKQLIERLIYAEGAENGLDFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 245
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
R+PLKLVDGGQSQRTF+YIKDAIEAVLLMIENP+R+NG IFNVGNP+NEVTV+QLAEMMT
Sbjct: 246 REPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPSRSNGQIFNVGNPNNEVTVKQLAEMMT 305
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
EVYAKVSGE +L+ PT+D+SS+EFYG GYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLES
Sbjct: 306 EVYAKVSGEPSLQTPTIDISSEEFYGVGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLES 365
Query: 367 TLTYQHRTYAEAIKQAVAKPVASS 390
TLTYQHRTYAEAIKQA AKP ASS
Sbjct: 366 TLTYQHRTYAEAIKQATAKPAASS 389
>gi|356539350|ref|XP_003538161.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Glycine max]
Length = 387
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/385 (89%), Positives = 365/385 (94%), Gaps = 2/385 (0%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT- 65
R+DLDG PIKP+TICMIGAGGFIGSHLCEK++ ETPH +LALDVY+DKIKHLL+P
Sbjct: 3 RVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETPHTVLALDVYSDKIKHLLDPADSPL 62
Query: 66 -GADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
A RI FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV
Sbjct: 63 PWAGRITFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 122
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
KYCSENNKRLIHFSTCEVYGKTIG+FLPKDSPLR+DPAYYVLKED SPCIFGSIEKQRWS
Sbjct: 123 KYCSENNKRLIHFSTCEVYGKTIGAFLPKDSPLRKDPAYYVLKEDESPCIFGSIEKQRWS 182
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
YACAKQLIERLI+AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL
Sbjct: 183 YACAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 242
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304
LR +PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNP+NEVTVRQLAE+
Sbjct: 243 LRGEPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEI 302
Query: 305 MTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
M +VY+KVSGE E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDLL
Sbjct: 303 MIQVYSKVSGEQTAETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLL 362
Query: 365 ESTLTYQHRTYAEAIKQAVAKPVAS 389
ESTLTYQHRTYAEA+K+ +AKP+AS
Sbjct: 363 ESTLTYQHRTYAEAVKKVIAKPLAS 387
>gi|217072152|gb|ACJ84436.1| unknown [Medicago truncatula]
Length = 390
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/386 (88%), Positives = 364/386 (94%)
Query: 4 ASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES 63
+S R+DLDG PIKP+TICMIGAGGFIGSHLCEK++ ET HK+LALDVYNDKIKHLLEPES
Sbjct: 5 SSTRIDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETSHKVLALDVYNDKIKHLLEPES 64
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
RI FHRLNIK+DSRLEGLIKMADL INLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 65 LPWNGRIHFHRLNIKNDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDALPV 124
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
VKYCSE NKRLIHFSTCEVYGKTIGS+LPKDSPLRQDPAYY+LKED SPCIFGSIEKQRW
Sbjct: 125 VKYCSETNKRLIHFSTCEVYGKTIGSYLPKDSPLRQDPAYYMLKEDVSPCIFGSIEKQRW 184
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
SYACAKQLIERL+YAEGAE+GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN
Sbjct: 185 SYACAKQLIERLVYAEGAESGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 244
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
LLR +PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNP+NEVTVRQLAE
Sbjct: 245 LLRGEPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAE 304
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
MM +VY+KVSG E PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QL WNPKTSLWDL
Sbjct: 305 MMIQVYSKVSGTQPPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLEWNPKTSLWDL 364
Query: 364 LESTLTYQHRTYAEAIKQAVAKPVAS 389
LESTLTYQHRTYAEAIK+ +A+P+AS
Sbjct: 365 LESTLTYQHRTYAEAIKKVIAQPIAS 390
>gi|85718018|gb|ABC75032.1| UDP-apiose/xylose synthase [Solanum tuberosum]
Length = 386
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/389 (87%), Positives = 366/389 (94%), Gaps = 3/389 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MAG R+DLDG PIKP+TICMIGAGGFIGSHLCEK++ ETPH +LA+DVY+DKIKHLLE
Sbjct: 1 MAG---RVDLDGNPIKPMTICMIGAGGFIGSHLCEKLMSETPHTVLAVDVYSDKIKHLLE 57
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P S RIQFHR+NIK+DSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 58 PTSLPWNGRIQFHRINIKNDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDA 117
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSEN KRLIHFSTCEVYGKTIG+FLP+DSPLRQDPAY+VL E+ASPCIFG IEK
Sbjct: 118 LPVVKYCSENGKRLIHFSTCEVYGKTIGAFLPEDSPLRQDPAYFVLSEEASPCIFGPIEK 177
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 178 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 237
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLR +PLKLVDGG SQRTFIYIKDAIEAV LMIENPARANGHIFNVGNP+NEVTV+Q
Sbjct: 238 SNNLLRHEPLKLVDGGHSQRTFIYIKDAIEAVFLMIENPARANGHIFNVGNPNNEVTVKQ 297
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMT+VY+KVSGE LE PTVDVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL
Sbjct: 298 LAEMMTQVYSKVSGETPLETPTVDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSL 357
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLESTLTYQHRTYAEA+KQA++K A+
Sbjct: 358 WDLLESTLTYQHRTYAEAVKQAMSKTTAN 386
>gi|37379419|gb|AAQ91380.1| UDP-D-apiose/UDP-D-xylose synthase [Nicotiana benthamiana]
Length = 387
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/389 (86%), Positives = 361/389 (92%), Gaps = 2/389 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MAG R+DLDG IKP+ ICMIGAGGFIGSHLCEK++ ETPH +LA+DVY+DKIKHLLE
Sbjct: 1 MAGG--RVDLDGNVIKPMKICMIGAGGFIGSHLCEKLMNETPHTVLAVDVYSDKIKHLLE 58
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P RIQFHR+NIK+DSRLEGLIKMADL +NLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 59 PADLPWTGRIQFHRINIKNDSRLEGLIKMADLVVNLAAICTPADYNTRPLDTIYSNFIDA 118
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSEN KRLIHFSTCEVYGKTIG+FLP+ SPLRQDPAYYVLKED SPCIFGSIEK
Sbjct: 119 LPVVKYCSENGKRLIHFSTCEVYGKTIGAFLPEXSPLRQDPAYYVLKEDVSPCIFGSIEK 178
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 179 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 238
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLR +PLKLVDGG SQRTFIYIKDAIEAVLLMIENPARANG IFNVGNP+NEVTVRQ
Sbjct: 239 SNNLLRHEPLKLVDGGHSQRTFIYIKDAIEAVLLMIENPARANGQIFNVGNPNNEVTVRQ 298
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
LAEMMT+VY+KVSGE+ E PT+DVSSKEFYGEGYDDSDKRIPDMT+IN+QLGWNPKTSL
Sbjct: 299 LAEMMTQVYSKVSGESPPETPTIDVSSKEFYGEGYDDSDKRIPDMTLINRQLGWNPKTSL 358
Query: 361 WDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
WDLLES LTYQHRTYAEA+KQA++K A+
Sbjct: 359 WDLLESXLTYQHRTYAEAVKQAMSKTTAN 387
>gi|255573008|ref|XP_002527434.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
gi|223533169|gb|EEF34926.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
Length = 373
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/383 (87%), Positives = 350/383 (91%), Gaps = 13/383 (3%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R+DLDGRPIK +TICMIGAGGFIGSHLCEKIL ETPHKILALDVYNDKIKHLLEP+S
Sbjct: 4 RVDLDGRPIKEMTICMIGAGGFIGSHLCEKILNETPHKILALDVYNDKIKHLLEPDSLPW 63
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
A RIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY
Sbjct: 64 AGRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 123
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
CSENNKRLIHFST Y DPAYY+LKED SPCIFGSIEKQRWSYA
Sbjct: 124 CSENNKRLIHFSTXXSY-------------FSWDPAYYILKEDESPCIFGSIEKQRWSYA 170
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN LLR
Sbjct: 171 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNALLR 230
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
+PLKLVDGGQSQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTV+QLAEMMT
Sbjct: 231 GEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVKQLAEMMT 290
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
EVY+KVSGE LE PTVD+SSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLES
Sbjct: 291 EVYSKVSGEPVLEVPTVDISSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLES 350
Query: 367 TLTYQHRTYAEAIKQAVAKPVAS 389
TLTYQHRTYAEAIK+ +AKP +S
Sbjct: 351 TLTYQHRTYAEAIKKVLAKPTSS 373
>gi|195639652|gb|ACG39294.1| bifunctional polymyxin resistance arnA protein [Zea mays]
gi|223950079|gb|ACN29123.1| unknown [Zea mays]
gi|414878185|tpg|DAA55316.1| TPA: DTDP-glucose 4,6-dehydratase [Zea mays]
Length = 394
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/387 (83%), Positives = 358/387 (92%)
Query: 4 ASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES 63
A+ RLDLDG PI P+TICMIGAGGFIGSHLCEK++ ET H +LA+DVY DKI+HL++P
Sbjct: 8 AATRLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETHHTVLAVDVYCDKIRHLVDPAP 67
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 68 PHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 127
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
VKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++P +YVLKED SPCIFG I KQRW
Sbjct: 128 VKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRW 187
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
SYACAKQLIERL++AEGAENGL+FTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNN
Sbjct: 188 SYACAKQLIERLVFAEGAENGLDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNN 247
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
LLRR+PLKLVDGGQSQRTF+YIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVR+LA+
Sbjct: 248 LLRREPLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQ 307
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
MMTEVYA VSGEA L+EP +DVSS +FYGEGYDDSDKRIPDMTIIN+QLGWNPKT L DL
Sbjct: 308 MMTEVYANVSGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDL 367
Query: 364 LESTLTYQHRTYAEAIKQAVAKPVASS 390
LE+TLTYQH+TY EA+K+ +++ AS+
Sbjct: 368 LETTLTYQHKTYKEAVKRQMSQASAST 394
>gi|242060051|ref|XP_002459171.1| hypothetical protein SORBIDRAFT_03g047200 [Sorghum bicolor]
gi|241931146|gb|EES04291.1| hypothetical protein SORBIDRAFT_03g047200 [Sorghum bicolor]
Length = 397
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/384 (83%), Positives = 355/384 (92%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
RLDLDG PI P+TICMIGAGGFIGSHLCEK++ ET H +LA+DVY DKI+HL++P
Sbjct: 14 RLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHL 73
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY
Sbjct: 74 AGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 133
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
CSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++P +YVLKED SPCIFG I KQRWSYA
Sbjct: 134 CSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYA 193
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQLIERLI+AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLR
Sbjct: 194 CAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLR 253
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
R+PLKLVDGGQSQRTF+YIKDAIEAV+LMIENPARANGHIFNVGNP NEVTVR+LA+MMT
Sbjct: 254 REPLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPDNEVTVRELAQMMT 313
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
EVYA VSGEA L+EP +DVSS +FYGEGYDDSDKRIPDMTIIN+QLGWNPKT L DLLE+
Sbjct: 314 EVYANVSGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLET 373
Query: 367 TLTYQHRTYAEAIKQAVAKPVASS 390
TLTYQH+TY EA+K+ +++ ++S
Sbjct: 374 TLTYQHKTYKEAVKRQMSQASSTS 397
>gi|115442487|ref|NP_001045523.1| Os01g0969100 [Oryza sativa Japonica Group]
gi|18844860|dbj|BAB85329.1| putative dTDP-glucose 4,6-dehydratase [Oryza sativa Japonica Group]
gi|113535054|dbj|BAF07437.1| Os01g0969100 [Oryza sativa Japonica Group]
gi|215697870|dbj|BAG92063.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619949|gb|EEE56081.1| hypothetical protein OsJ_04912 [Oryza sativa Japonica Group]
Length = 398
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/384 (84%), Positives = 351/384 (91%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
RLDLDG PI P+TICMIGAGGFIGSHLCEK++ ET H + A+DVY DKI+HL++P
Sbjct: 15 RLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETAHVVYAVDVYCDKIRHLVDPAPPHL 74
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY
Sbjct: 75 HGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 134
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
CSENNKRLIHFSTCEVYGKTIGSFLP D PLR++P +YVLKED SPCIFG I KQRWSYA
Sbjct: 135 CSENNKRLIHFSTCEVYGKTIGSFLPTDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYA 194
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQLIERLI+AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLR
Sbjct: 195 CAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLR 254
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
R+PLKLVDGGQSQRTF+YIKDAIEAV LMIENPARANG IFNVGNP+NEVTVRQLAEMMT
Sbjct: 255 REPLKLVDGGQSQRTFVYIKDAIEAVHLMIENPARANGQIFNVGNPNNEVTVRQLAEMMT 314
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
EVYA VSGE L+EP +DVSSK+FYGEGYDDSDKRIPDMTIIN+QLGWNPKT L DLLE+
Sbjct: 315 EVYANVSGEPPLDEPMIDVSSKQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLET 374
Query: 367 TLTYQHRTYAEAIKQAVAKPVASS 390
TLTYQH+TY EAIK+ +++ ASS
Sbjct: 375 TLTYQHKTYKEAIKRQMSQASASS 398
>gi|226502716|ref|NP_001149219.1| bifunctional polymyxin resistance arnA protein [Zea mays]
gi|194703324|gb|ACF85746.1| unknown [Zea mays]
gi|195625540|gb|ACG34600.1| bifunctional polymyxin resistance arnA protein [Zea mays]
gi|413951216|gb|AFW83865.1| bifunctional polymyxin resistance arnA protein [Zea mays]
Length = 396
Score = 681 bits (1757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/382 (83%), Positives = 352/382 (92%)
Query: 9 DLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGAD 68
DLDG + P+TICMIGAGGFIGSHLCEK++ ET H +LA+DVY DKI+HL++P A
Sbjct: 15 DLDGNSVAPLTICMIGAGGFIGSHLCEKLMAETRHVVLAVDVYCDKIRHLVDPAPPHLAG 74
Query: 69 RIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 128
RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS
Sbjct: 75 RISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 134
Query: 129 ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACA 188
EN+KRLIHFSTCEVYGKTIGSFLPKD PLR++P +YVLKED SPCIFG I KQRWSYACA
Sbjct: 135 ENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACA 194
Query: 189 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
KQLIERLI+AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLRR+
Sbjct: 195 KQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRRE 254
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
PLKLVDGGQSQRTF+YIKDAIEAV+LMIENPARANGHIFNVGNP NEVTVR+LA+MMTEV
Sbjct: 255 PLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPDNEVTVRELAQMMTEV 314
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
YA VSGEA L+EP +DVSS +FYGEGYDDSDKRIPDMTIIN+QLGWNPKT L DLLE+TL
Sbjct: 315 YANVSGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTL 374
Query: 369 TYQHRTYAEAIKQAVAKPVASS 390
TYQH+TY EA+K+ +++ A+S
Sbjct: 375 TYQHKTYKEAVKRQMSQASATS 396
>gi|162462229|ref|NP_001105251.1| LOC542159 [Zea mays]
gi|42602317|gb|AAS21758.1| dTDP-glucose 4,6-dehydratase [Zea mays]
Length = 395
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/388 (82%), Positives = 355/388 (91%), Gaps = 1/388 (0%)
Query: 4 ASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES 63
A+ RLDLDG PI P+TICMIGAGGFIGSHLCEK++ ET H +LA+DVY DKI+HL++P
Sbjct: 8 AATRLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETHHTVLAVDVYCDKIRHLVDPAP 67
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV
Sbjct: 68 PHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 127
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
VKYCSEN+KRLIHF TCEVYGKTIGSFLPKD PLR++P +YVLKED SPCIFG I KQRW
Sbjct: 128 VKYCSENSKRLIHFPTCEVYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRW 187
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
SYACAKQLIERL++AEGAENGL+FTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNN
Sbjct: 188 SYACAKQLIERLVFAEGAENGLDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNN 247
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
LLRR+PLKLVDGGQSQRTF+YIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVR+LA
Sbjct: 248 LLRREPLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAP 307
Query: 304 MMTEVYAKVS-GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD 362
MMTEVY ++S GEA L+EP +DVSS +FYGEGYDDSDKRIPDMTIIN+QLGWNPKT L D
Sbjct: 308 MMTEVYTQMSQGEAPLDEPMIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKD 367
Query: 363 LLESTLTYQHRTYAEAIKQAVAKPVASS 390
LLE+TLTYQH+TY EA K+ +++ AS+
Sbjct: 368 LLETTLTYQHKTYKEAAKRQMSQASAST 395
>gi|125529268|gb|EAY77382.1| hypothetical protein OsI_05369 [Oryza sativa Indica Group]
Length = 407
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/393 (82%), Positives = 351/393 (89%), Gaps = 9/393 (2%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
RLDLDG PI P+TICMIGAGGFIGSHLCEK++ ET H + A+DVY DKI+HL++P
Sbjct: 15 RLDLDGNPIAPLTICMIGAGGFIGSHLCEKLMAETAHVVYAVDVYCDKIRHLVDPAPPHL 74
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY
Sbjct: 75 HGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 134
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLR---------QDPAYYVLKEDASPCIFGS 177
CSENNKRLIHFSTCEVYGKTIGSFLP D PLR Q+P +YVLKED SPCIFG
Sbjct: 135 CSENNKRLIHFSTCEVYGKTIGSFLPTDHPLRKIGGGMDLVQEPEFYVLKEDESPCIFGP 194
Query: 178 IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237
I KQRWSYACAKQLIERLI+AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVL
Sbjct: 195 IVKQRWSYACAKQLIERLIFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVL 254
Query: 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVT 297
ACFSNNLLRR+PLKLVDGGQSQRTF+YIKDAIEAV LMIENPARANG IFNVGNP+NEVT
Sbjct: 255 ACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVHLMIENPARANGQIFNVGNPNNEVT 314
Query: 298 VRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
VRQLAEMMTEVYA VSGE L+EP +DVSSK+FYGEGYDDSDKRIPDMTIIN+QLGWNPK
Sbjct: 315 VRQLAEMMTEVYANVSGEPPLDEPMIDVSSKQFYGEGYDDSDKRIPDMTIINKQLGWNPK 374
Query: 358 TSLWDLLESTLTYQHRTYAEAIKQAVAKPVASS 390
T L DLLE+TLTYQH+TY EAIK+ +++ ASS
Sbjct: 375 TPLKDLLETTLTYQHKTYKEAIKRQMSQASASS 407
>gi|357126960|ref|XP_003565155.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Brachypodium distachyon]
Length = 393
Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/388 (81%), Positives = 352/388 (90%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
G+ R DLDG P+ P+TICMIGAGGFIGSHLCEK++ ET H +LA+DVY DKI+HL++P
Sbjct: 6 GSLGRTDLDGNPVAPLTICMIGAGGFIGSHLCEKLMAETAHVVLAVDVYCDKIRHLVDPA 65
Query: 63 SQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
+ RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP
Sbjct: 66 PPHLSGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 125
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVLKED SPCIFG I KQR
Sbjct: 126 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLKEDESPCIFGPIVKQR 185
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
WSYACAKQLIERLI+AEGAEN LEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSN
Sbjct: 186 WSYACAKQLIERLIFAEGAENDLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSN 245
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLA 302
NLLRR+PLKLVDGG+SQRTF+YIKDAIEAV LMIENPARANGHIFNVGNP NEVTVR+LA
Sbjct: 246 NLLRREPLKLVDGGESQRTFVYIKDAIEAVHLMIENPARANGHIFNVGNPDNEVTVRELA 305
Query: 303 EMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD 362
EMM EVYA VSGE L+EP +DVS+K+FYGEGYDDSDKRIPDMT+IN+QLGWNPKT L D
Sbjct: 306 EMMIEVYANVSGEPPLDEPLIDVSAKQFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKD 365
Query: 363 LLESTLTYQHRTYAEAIKQAVAKPVASS 390
LLE+TLTYQH+TY EA+K+ +++ ASS
Sbjct: 366 LLETTLTYQHKTYKEAVKRQMSQATASS 393
>gi|326511389|dbj|BAJ87708.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518909|dbj|BAJ92615.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/383 (82%), Positives = 348/383 (90%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R+DLDG + P+TICMIGAGGFIGSHLCEK++ ET H +LA+DVY+DKI+HL++P
Sbjct: 6 RVDLDGGAVAPLTICMIGAGGFIGSHLCEKLMAETQHVVLAVDVYSDKIRHLVDPPPPHL 65
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
A RI FHRLNIK+D RLEGL+KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY
Sbjct: 66 AGRISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 125
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
CSEN KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL ED SPCIFG I KQRWSYA
Sbjct: 126 CSENGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYA 185
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQLIERL++AEGAENGL+FTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLR
Sbjct: 186 CAKQLIERLVFAEGAENGLDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLR 245
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
R+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNP NEVTVR+LAEMMT
Sbjct: 246 REPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMT 305
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
EVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIPDMT+IN+QLGWNPKT L DLLE+
Sbjct: 306 EVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLET 365
Query: 367 TLTYQHRTYAEAIKQAVAKPVAS 389
TLTYQH+TY EA+K + A+
Sbjct: 366 TLTYQHKTYKEAVKTQMCLATAT 388
>gi|45935133|gb|AAS79591.1| putative dihydroflavonol reductase [Ipomoea trifida]
gi|117166022|dbj|BAF36324.1| hypothetical protein [Ipomoea trifida]
Length = 407
Score = 673 bits (1737), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/353 (90%), Positives = 337/353 (95%), Gaps = 3/353 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MAG R+DLDG PIKP+TICMIGAGGFIGSHLCEK++ ET HK+LA+DVYNDKIKHLLE
Sbjct: 1 MAG---RVDLDGNPIKPITICMIGAGGFIGSHLCEKLMSETQHKVLAVDVYNDKIKHLLE 57
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P S ADRIQFHRLNIK+DSRLEGLIKMADLT+NLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 58 PASLPWADRIQFHRLNIKNDSRLEGLIKMADLTVNLAAICTPADYNTRPLDTIYSNFIDA 117
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSEN KRLIHFSTCEVYGKTIG FLPKDSPLRQDPAYYVLKEDASPCIFG IEK
Sbjct: 118 LPVVKYCSENGKRLIHFSTCEVYGKTIGCFLPKDSPLRQDPAYYVLKEDASPCIFGPIEK 177
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 178 QRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 237
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQ 300
SNNLLRR+PLKLVDGGQSQRTF+YIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVRQ
Sbjct: 238 SNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRQ 297
Query: 301 LAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLG 353
LAEMMT+VY+KVSGE +LE PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QL
Sbjct: 298 LAEMMTQVYSKVSGEVSLETPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLA 350
>gi|302796693|ref|XP_002980108.1| hypothetical protein SELMODRAFT_178068 [Selaginella moellendorffii]
gi|302820494|ref|XP_002991914.1| hypothetical protein SELMODRAFT_134390 [Selaginella moellendorffii]
gi|300140300|gb|EFJ07025.1| hypothetical protein SELMODRAFT_134390 [Selaginella moellendorffii]
gi|300152335|gb|EFJ18978.1| hypothetical protein SELMODRAFT_178068 [Selaginella moellendorffii]
Length = 395
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/395 (79%), Positives = 356/395 (90%), Gaps = 10/395 (2%)
Query: 5 SVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ 64
+ RLDLDG+ I+P+ ICMIGAGGFIGSHLCEK++ ET H +LA+DVY+DKI+HLLEP Q
Sbjct: 2 AARLDLDGQVIEPLKICMIGAGGFIGSHLCEKLMWETQHSVLAIDVYSDKIQHLLEP-GQ 60
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ + RI+FHR+NIKHDSRLEGLIK+ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV
Sbjct: 61 SWSSRIEFHRINIKHDSRLEGLIKLADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 120
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQ-------DPAYYVLKEDASPCIFGS 177
+YCS+NNKRLIHFSTCEVYGKTIGSFLP+DS LR+ DP+YYVLKED SPCIFG
Sbjct: 121 RYCSDNNKRLIHFSTCEVYGKTIGSFLPEDSSLRKACILFFLDPSYYVLKEDESPCIFGP 180
Query: 178 IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237
IEKQRWSYACAKQLIER+IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL
Sbjct: 181 IEKQRWSYACAKQLIERVIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 240
Query: 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVT 297
ACFS NLL+ +PLKLVDGGQSQRTF+YIKDAI+AV+ M+ENP RANG++FNVGNP NEVT
Sbjct: 241 ACFSTNLLKSEPLKLVDGGQSQRTFVYIKDAIDAVMRMVENPQRANGYVFNVGNPDNEVT 300
Query: 298 VRQLAEMMTE--VYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWN 355
VR+LA MMTE VY KVSG L+EPT+DVSSKEFYGEGYDDSDKRIPDMTII +QL W
Sbjct: 301 VRELALMMTEASVYTKVSGRPQLDEPTIDVSSKEFYGEGYDDSDKRIPDMTIIKKQLEWE 360
Query: 356 PKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVASS 390
PKTSL+DLLESTLTYQH+TYA A++Q ++K + ++
Sbjct: 361 PKTSLFDLLESTLTYQHKTYARAMQQLLSKSLPTA 395
>gi|194689614|gb|ACF78891.1| unknown [Zea mays]
Length = 369
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 309/369 (83%), Positives = 343/369 (92%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
MIGAGGFIGSHLCEK++ ET H +LA+DVY DKI+HL++P A RI FHRLNIK+DS
Sbjct: 1 MIGAGGFIGSHLCEKLMAETHHTVLAVDVYCDKIRHLVDPAPPHLAGRISFHRLNIKNDS 60
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCE
Sbjct: 61 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCE 120
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYGKTIGSFLPKD PLR++P +YVLKED SPCIFG I KQRWSYACAKQLIERL++AEGA
Sbjct: 121 VYGKTIGSFLPKDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGA 180
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
ENGL+FTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLRR+PLKLVDGGQSQRT
Sbjct: 181 ENGLDFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRT 240
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321
F+YIKDAIEAV+LMIENPARANGHIFNVGNP+NEVTVR+LA+MMTEVYA VSGEA L+EP
Sbjct: 241 FVYIKDAIEAVVLMIENPARANGHIFNVGNPNNEVTVRELAQMMTEVYANVSGEAPLDEP 300
Query: 322 TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQ 381
+DVSS +FYGEGYDDSDKRIPDMTIIN+QLGWNPKT L DLLE+TLTYQH+TY EA+K+
Sbjct: 301 MIDVSSSQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKR 360
Query: 382 AVAKPVASS 390
+++ AS+
Sbjct: 361 QMSQASAST 369
>gi|357444565|ref|XP_003592560.1| Bifunctional polymyxin resistance arnA protein [Medicago
truncatula]
gi|355481608|gb|AES62811.1| Bifunctional polymyxin resistance arnA protein [Medicago
truncatula]
Length = 372
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/386 (79%), Positives = 343/386 (88%), Gaps = 18/386 (4%)
Query: 4 ASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES 63
+S RL+LDG PIKP+TIC+IGAGGFIGSHLCEK++L+TPHK+LALDVY+DK+KHLLEP++
Sbjct: 5 SSTRLNLDGNPIKPITICIIGAGGFIGSHLCEKLMLQTPHKVLALDVYSDKLKHLLEPDT 64
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
+RI +H LNIK+DSRLEGLIK+ADL INLAAICTPADYNTRPLDTIYSNF+DA+PV
Sbjct: 65 LPWNNRIDYHSLNIKNDSRLEGLIKIADLVINLAAICTPADYNTRPLDTIYSNFVDAIPV 124
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
V YGKTIGSFL KDSPLR DPAYY+LKED SPCIFG IEKQRW
Sbjct: 125 V------------------YGKTIGSFLSKDSPLRHDPAYYMLKEDESPCIFGPIEKQRW 166
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
SYACAKQLIERLIY EG E GLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNN
Sbjct: 167 SYACAKQLIERLIYGEGDEKGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNN 226
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
LLR +PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANG IFNVGNP+NEVTVR+LAE
Sbjct: 227 LLRGEPLKLVDGGESQRTFLYIKDAIEAVLLMIENPARANGKIFNVGNPNNEVTVRELAE 286
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
MM +VY+KVSG+ LE PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL DL
Sbjct: 287 MMIKVYSKVSGDQPLETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLEDL 346
Query: 364 LESTLTYQHRTYAEAIKQAVAKPVAS 389
LESTLTYQH+TYAEAIK+ +A+ +AS
Sbjct: 347 LESTLTYQHKTYAEAIKKVIAQTIAS 372
>gi|357460939|ref|XP_003600751.1| Bifunctional polymyxin resistance arnA protein [Medicago
truncatula]
gi|355489799|gb|AES71002.1| Bifunctional polymyxin resistance arnA protein [Medicago
truncatula]
Length = 372
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/386 (79%), Positives = 342/386 (88%), Gaps = 18/386 (4%)
Query: 4 ASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES 63
+S RL+LDG PIKP+TIC+IGAGGFIGSHLCEK++L+TPHK+LALDVY+DK+KHLLEP++
Sbjct: 5 SSTRLNLDGNPIKPITICIIGAGGFIGSHLCEKLMLQTPHKVLALDVYSDKLKHLLEPDT 64
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
+RI +H LNIK+DSRLEGLIK+ADL INLAAICTPADYNTRPLDTIYSNF+DA+PV
Sbjct: 65 LPWNNRIDYHSLNIKNDSRLEGLIKIADLVINLAAICTPADYNTRPLDTIYSNFVDAIPV 124
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
V YGKTIGSFL KDSPLR DPAYY+LKED SPCIFG IEKQRW
Sbjct: 125 V------------------YGKTIGSFLSKDSPLRHDPAYYMLKEDESPCIFGPIEKQRW 166
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
SYACAKQLIERLIY EG E GLEFTIVRPFNWI PRMDFIPG+DGPSEGVPRVLACFSNN
Sbjct: 167 SYACAKQLIERLIYGEGDEKGLEFTIVRPFNWIDPRMDFIPGVDGPSEGVPRVLACFSNN 226
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAE 303
LLR +PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANG IFNVGNP+NEVTVR+LAE
Sbjct: 227 LLRGEPLKLVDGGESQRTFLYIKDAIEAVLLMIENPARANGKIFNVGNPNNEVTVRELAE 286
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
MM +VY+KVSG+ LE PT+DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSL DL
Sbjct: 287 MMIKVYSKVSGDQPLETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLEDL 346
Query: 364 LESTLTYQHRTYAEAIKQAVAKPVAS 389
LESTLTYQH+TYAEAIK+ +A+ +AS
Sbjct: 347 LESTLTYQHKTYAEAIKKVIAQTIAS 372
>gi|359479568|ref|XP_002274631.2| PREDICTED: bifunctional polymyxin resistance protein ArnA [Vitis
vinifera]
Length = 433
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/382 (76%), Positives = 339/382 (88%), Gaps = 4/382 (1%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
RLDLDG+ I P+TIC+IG GFIGSHLCE ++ T H + +DV +DKI LLE +S +
Sbjct: 54 RLDLDGKEIAPLTICLIGGAGFIGSHLCELLMTHTHHSAIVIDVSSDKITRLLE-KSCSW 112
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
++RI+FH++NIK+DSRLE LIK +DLTINLAAICTPADYNTRPLDTIYSNF+DA+PVVKY
Sbjct: 113 SNRIEFHKINIKNDSRLETLIKSSDLTINLAAICTPADYNTRPLDTIYSNFLDAIPVVKY 172
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C+E+NKRLIHFSTCEVYGKTIGSFLP D LRQDP +Y+LKED SPCIFG +EKQRWSYA
Sbjct: 173 CTESNKRLIHFSTCEVYGKTIGSFLPADHSLRQDPDFYILKEDVSPCIFGPVEKQRWSYA 232
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQ+IERLIYAEGAE+GL+FTIVRPFNWIGPRMDFIPGIDGP+EGVPRVLACFSNNLLR
Sbjct: 233 CAKQMIERLIYAEGAEHGLKFTIVRPFNWIGPRMDFIPGIDGPTEGVPRVLACFSNNLLR 292
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
+PLKLVDGG+SQRTF YIKDAIEAVLLMIENP RANG IFNVGNP+NEVT+RQLA++M
Sbjct: 293 GEPLKLVDGGKSQRTFCYIKDAIEAVLLMIENPERANGQIFNVGNPNNEVTMRQLAQLMI 352
Query: 307 EVYAKVS-GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
EVY K+S G + L TVDVSSK+FYG GYDDSDKRIPDMTIIN+QLGWNPKT L DLLE
Sbjct: 353 EVYGKISVGSSDLT--TVDVSSKDFYGVGYDDSDKRIPDMTIINRQLGWNPKTPLQDLLE 410
Query: 366 STLTYQHRTYAEAIKQAVAKPV 387
TLTYQH+TY+++IK+A++ P
Sbjct: 411 VTLTYQHQTYSQSIKKALSNPT 432
>gi|147771536|emb|CAN62503.1| hypothetical protein VITISV_010651 [Vitis vinifera]
Length = 382
Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust.
Identities = 295/382 (77%), Positives = 339/382 (88%), Gaps = 4/382 (1%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
RLDLDG+ I P+TIC+IG GFIGSHLCE ++ T H + +DV +DKI LLE +S +
Sbjct: 3 RLDLDGKEIAPLTICLIGGAGFIGSHLCELLMTHTHHSAIVIDVSSDKITRLLE-KSCSW 61
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
++RI+FH++NIK+DSRLE LIK +DLTINLAAICTPADYNTRPLDTIYSNF+DA+PVVKY
Sbjct: 62 SNRIEFHKINIKNDSRLETLIKSSDLTINLAAICTPADYNTRPLDTIYSNFLDAIPVVKY 121
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C+E+NKRLIHFSTCEVYGKTIGSFLP D LRQDP +Y+LKED SPCIFG +EKQRWSYA
Sbjct: 122 CTESNKRLIHFSTCEVYGKTIGSFLPADHSLRQDPDFYILKEDVSPCIFGPVEKQRWSYA 181
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQ+IERLIYAEGAE+GL+FTIVRPFNWIGPRMDFIPGIDGP+EGVPRVLACFSNNLLR
Sbjct: 182 CAKQMIERLIYAEGAEHGLKFTIVRPFNWIGPRMDFIPGIDGPTEGVPRVLACFSNNLLR 241
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
+PLKLVDGG+SQRTF YIKDAIEAVLLMIENP RANG IFNVGNP+NEVT+RQLAE+M
Sbjct: 242 GEPLKLVDGGKSQRTFCYIKDAIEAVLLMIENPERANGQIFNVGNPNNEVTMRQLAELMI 301
Query: 307 EVYAKVS-GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
EVY K+S G + L TVDVSSK+FYG GYDDSDKRIPDMTIIN+QLGWNPKT L DLLE
Sbjct: 302 EVYGKISVGSSDLT--TVDVSSKDFYGVGYDDSDKRIPDMTIINRQLGWNPKTPLQDLLE 359
Query: 366 STLTYQHRTYAEAIKQAVAKPV 387
TLTYQH+TY+++IK+A++ P
Sbjct: 360 VTLTYQHQTYSQSIKKALSNPT 381
>gi|296084932|emb|CBI28341.3| unnamed protein product [Vitis vinifera]
Length = 382
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 294/382 (76%), Positives = 339/382 (88%), Gaps = 4/382 (1%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
RLDLDG+ I P+TIC+IG GFIGSHLCE ++ T H + +DV +DKI LLE +S +
Sbjct: 3 RLDLDGKEIAPLTICLIGGAGFIGSHLCELLMTHTHHSAIVIDVSSDKITRLLE-KSCSW 61
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
++RI+FH++NIK+DSRLE LIK +DLTINLAAICTPADYNTRPLDTIYSNF+DA+PVVKY
Sbjct: 62 SNRIEFHKINIKNDSRLETLIKSSDLTINLAAICTPADYNTRPLDTIYSNFLDAIPVVKY 121
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C+E+NKRLIHFSTCEVYGKTIGSFLP D LRQDP +Y+LKED SPCIFG +EKQRWSYA
Sbjct: 122 CTESNKRLIHFSTCEVYGKTIGSFLPADHSLRQDPDFYILKEDVSPCIFGPVEKQRWSYA 181
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQ+IERLIYAEGAE+GL+FTIVRPFNWIGPRMDFIPGIDGP+EGVPRVLACFSNNLLR
Sbjct: 182 CAKQMIERLIYAEGAEHGLKFTIVRPFNWIGPRMDFIPGIDGPTEGVPRVLACFSNNLLR 241
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
+PLKLVDGG+SQRTF YIKDAIEAVLLMIENP RANG IFNVGNP+NEVT+RQLA++M
Sbjct: 242 GEPLKLVDGGKSQRTFCYIKDAIEAVLLMIENPERANGQIFNVGNPNNEVTMRQLAQLMI 301
Query: 307 EVYAKVS-GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
EVY K+S G + L TVDVSSK+FYG GYDDSDKRIPDMTIIN+QLGWNPKT L DLLE
Sbjct: 302 EVYGKISVGSSDLT--TVDVSSKDFYGVGYDDSDKRIPDMTIINRQLGWNPKTPLQDLLE 359
Query: 366 STLTYQHRTYAEAIKQAVAKPV 387
TLTYQH+TY+++IK+A++ P
Sbjct: 360 VTLTYQHQTYSQSIKKALSNPT 381
>gi|168063797|ref|XP_001783855.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664633|gb|EDQ51345.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 279/381 (73%), Positives = 334/381 (87%), Gaps = 1/381 (0%)
Query: 5 SVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQ 64
+ RL+LDG+ IKP+ ICMIGAGGFIGSHLCEK++ T H +LA+DV KI+HLL Q
Sbjct: 2 TARLNLDGQEIKPLRICMIGAGGFIGSHLCEKLMETTKHSVLAIDVCGVKIQHLL-ALGQ 60
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+DRI+F+++NIK D+RLEGLIK++DL INLAAICTPADYNTRPLDTIYSNF+DALPVV
Sbjct: 61 PWSDRIEFYKINIKSDTRLEGLIKVSDLVINLAAICTPADYNTRPLDTIYSNFVDALPVV 120
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+ C +N KRLIHFSTCE+YGKTIGSFLP+D PL+ DPA+ VLKED + CI+GSI KQRWS
Sbjct: 121 QQCRDNGKRLIHFSTCEIYGKTIGSFLPRDHPLKADPAFSVLKEDETACIYGSIHKQRWS 180
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
YACAKQLIERLI+ EGAENG++FTIVRPFNWIGPRMDFIPGIDGPS+ +PRVLACFSN+L
Sbjct: 181 YACAKQLIERLIFGEGAENGMKFTIVRPFNWIGPRMDFIPGIDGPSDSIPRVLACFSNSL 240
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEM 304
++ +PLKLVDGG+SQRTFIYIKDAIEAV +IENPARANGHIFNVGNPHNEVT+++LAE+
Sbjct: 241 MKGEPLKLVDGGKSQRTFIYIKDAIEAVQKIIENPARANGHIFNVGNPHNEVTIQELAEL 300
Query: 305 MTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
MT++Y K+SG A E TVDV SKEFYG GYDDSDKRIP+MT + +QL W PKTS++DL+
Sbjct: 301 MTDLYCKISGTARPEVVTVDVPSKEFYGVGYDDSDKRIPEMTQVRKQLEWEPKTSMYDLM 360
Query: 365 ESTLTYQHRTYAEAIKQAVAK 385
E TL YQ+ TYAEA+K+A++K
Sbjct: 361 EHTLKYQYSTYAEAVKKAMSK 381
>gi|357471689|ref|XP_003606129.1| Bifunctional polymyxin resistance arnA protein [Medicago
truncatula]
gi|355507184|gb|AES88326.1| Bifunctional polymyxin resistance arnA protein [Medicago
truncatula]
Length = 381
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 278/380 (73%), Positives = 336/380 (88%), Gaps = 3/380 (0%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R++LDG+PI P++IC+IG GGFIGSHL EK++ ET HK + +DV ++K+ HLL+ +S
Sbjct: 3 RVNLDGKPIVPISICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLLD-KSHPW 61
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
A+RI+FH++NIK+DSRLE L+K +DLTINLAAICTPADYNTRPLDTIYSNFIDA+PV+K+
Sbjct: 62 ANRIEFHQMNIKNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKF 121
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C+ENNKRLIHFSTCEV+GKTIGSFLP++ R++P YY LKED SPCIFG + KQRWSYA
Sbjct: 122 CTENNKRLIHFSTCEVFGKTIGSFLPEE--YRKEPQYYKLKEDVSPCIFGPVHKQRWSYA 179
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQ+ +RLIYAE AENGL+FTIVRP+NWIGPRMDFIPG+DGPS+GVPRVLACFSNNLLR
Sbjct: 180 CAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLR 239
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
+PLKLVDGG SQRTF+YIKDAIEAV+LMI+NP RANGHIFNVGNP NEV+V+QLAE+M
Sbjct: 240 GEPLKLVDGGHSQRTFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMI 299
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+VYAKV+G T+DVSS+ FYG+GYDDSD+RIPDMTII +QLGW PKTSL DLL+S
Sbjct: 300 KVYAKVAGVPESSLSTLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDDLLDS 359
Query: 367 TLTYQHRTYAEAIKQAVAKP 386
TL YQH+TY+ AIK+ ++KP
Sbjct: 360 TLQYQHQTYSHAIKKELSKP 379
>gi|355389631|gb|AER62757.1| hypothetical protein [Aegilops tauschii]
Length = 322
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 282/322 (87%), Positives = 302/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++P +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEPEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP VDVS+KEFYGEGYDDSDKRIPDMT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVVDVSAKEFYGEGYDDSDKRIPDMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389627|gb|AER62755.1| hypothetical protein [Secale cereale]
gi|355389629|gb|AER62756.1| hypothetical protein [Aegilops longissima]
Length = 322
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 281/322 (87%), Positives = 301/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP VDVS+KEFYGEGYDDSDKRIPDMT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVVDVSAKEFYGEGYDDSDKRIPDMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389671|gb|AER62777.1| hypothetical protein [Henrardia persica]
Length = 322
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/322 (86%), Positives = 301/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLAARISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIPDMT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389667|gb|AER62775.1| hypothetical protein [Eremopyrum bonaepartis]
Length = 322
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/322 (86%), Positives = 301/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIPDMT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389635|gb|AER62759.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
gi|355389637|gb|AER62760.1| hypothetical protein [Dasypyrum villosum]
gi|355389639|gb|AER62761.1| hypothetical protein [Dasypyrum villosum]
gi|355389643|gb|AER62763.1| hypothetical protein [Pseudoroegneria tauri subsp. libanotica]
Length = 322
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/322 (86%), Positives = 301/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LE+P +DVS+KEFYGEGYDDSDKRIPDMT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEQPVIDVSAKEFYGEGYDDSDKRIPDMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389647|gb|AER62765.1| hypothetical protein [Taeniatherum caput-medusae]
Length = 322
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/322 (86%), Positives = 300/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLTGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP VDVS+KEFYGEGYDDSDKRIPDMT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVVDVSAKEFYGEGYDDSDKRIPDMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389669|gb|AER62776.1| hypothetical protein [Eremopyrum triticeum]
Length = 322
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 280/322 (86%), Positives = 300/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP VDVS+KEFYGEGYDDSDKRIPDM +
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVVDVSAKEFYGEGYDDSDKRIPDMAL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389645|gb|AER62764.1| hypothetical protein [Pseudoroegneria spicata]
gi|355389663|gb|AER62773.1| hypothetical protein [Australopyrum retrofractum]
Length = 322
Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/322 (86%), Positives = 301/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIP+MT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPNMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389655|gb|AER62769.1| hypothetical protein [Agropyron mongolicum]
gi|355389657|gb|AER62770.1| hypothetical protein [Agropyron mongolicum]
Length = 320
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/320 (87%), Positives = 299/320 (93%)
Query: 50 VYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRP 109
VY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRP
Sbjct: 1 VYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRP 60
Query: 110 LDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169
LDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL ED
Sbjct: 61 LDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTED 120
Query: 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGP 229
SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGP
Sbjct: 121 ESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGP 180
Query: 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289
SEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIFNV
Sbjct: 181 SEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNV 240
Query: 290 GNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
GNP NEVTVR+LAEMMTEVYAKVSGE LEEP VDVS+KEFYGEGYDDSDKRIPDMT+IN
Sbjct: 241 GNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVVDVSAKEFYGEGYDDSDKRIPDMTLIN 300
Query: 350 QQLGWNPKTSLWDLLESTLT 369
+QLGWNPKT L DLLE+TLT
Sbjct: 301 KQLGWNPKTPLKDLLETTLT 320
>gi|355389677|gb|AER62780.1| hypothetical protein [Hordeum marinum subsp. marinum]
Length = 322
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 279/322 (86%), Positives = 299/322 (92%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY DKI+HL++P A RI FHRLNIK+D RLEGLIKMADLTINLAAICTPADYNT
Sbjct: 1 VDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDPRLEGLIKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIPDMT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389625|gb|AER62754.1| hypothetical protein [Hordeum vulgare subsp. spontaneum]
Length = 322
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 277/322 (86%), Positives = 300/322 (93%)
Query: 48 LDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNT 107
+DVY+DKI+HL++P A RI FHRLNIK+D RLEGL+KMADLTINLAAICTPADYNT
Sbjct: 1 VDVYSDKIRHLVDPPPPHLAGRISFHRLNIKNDPRLEGLVKMADLTINLAAICTPADYNT 60
Query: 108 RPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLK 167
RPLDTIYSNFIDALPVVKYCSEN KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL
Sbjct: 61 RPLDTIYSNFIDALPVVKYCSENGKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLT 120
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGL+FTIVRPFNWIGPRMDFIPG+D
Sbjct: 121 EDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLDFTIVRPFNWIGPRMDFIPGVD 180
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIF 287
GPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIF
Sbjct: 181 GPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIF 240
Query: 288 NVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTI 347
NVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIPDMT+
Sbjct: 241 NVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTL 300
Query: 348 INQQLGWNPKTSLWDLLESTLT 369
IN+QLGWNPKT L DLLE+TLT
Sbjct: 301 INKQLGWNPKTPLKDLLETTLT 322
>gi|355389651|gb|AER62767.1| hypothetical protein [Dasypyrum villosum]
gi|355389653|gb|AER62768.1| hypothetical protein [Dasypyrum villosum]
Length = 320
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/320 (86%), Positives = 299/320 (93%)
Query: 50 VYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRP 109
VY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRP
Sbjct: 1 VYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRP 60
Query: 110 LDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169
LDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL ED
Sbjct: 61 LDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTED 120
Query: 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGP 229
SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGP
Sbjct: 121 ESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGP 180
Query: 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289
SEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIFNV
Sbjct: 181 SEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNV 240
Query: 290 GNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
GNP NEVTVR+LAEMMTEVYAKVSGE LE+P +DVS+KEFYGEGYDDSDKRIPDMT+IN
Sbjct: 241 GNPDNEVTVRELAEMMTEVYAKVSGEPPLEQPVIDVSAKEFYGEGYDDSDKRIPDMTLIN 300
Query: 350 QQLGWNPKTSLWDLLESTLT 369
+QLGWNPKT L DLLE+TLT
Sbjct: 301 KQLGWNPKTPLKDLLETTLT 320
>gi|355389673|gb|AER62778.1| hypothetical protein [Henrardia persica]
Length = 319
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/319 (87%), Positives = 298/319 (93%)
Query: 51 YNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPL 110
Y DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPL
Sbjct: 1 YCDKIRHLVDPPPPHLAARISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPL 60
Query: 111 DTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDA 170
DTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL ED
Sbjct: 61 DTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDE 120
Query: 171 SPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPS 230
SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPS
Sbjct: 121 SPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPS 180
Query: 231 EGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVG 290
EGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIFNVG
Sbjct: 181 EGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVG 240
Query: 291 NPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQ 350
NP NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIPDMT+IN+
Sbjct: 241 NPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINK 300
Query: 351 QLGWNPKTSLWDLLESTLT 369
QLGWNPKT L DLLE+TLT
Sbjct: 301 QLGWNPKTPLKDLLETTLT 319
>gi|355389665|gb|AER62774.1| hypothetical protein [Australopyrum retrofractum]
Length = 320
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 278/320 (86%), Positives = 299/320 (93%)
Query: 50 VYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRP 109
VY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRP
Sbjct: 1 VYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRP 60
Query: 110 LDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169
LDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL ED
Sbjct: 61 LDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTED 120
Query: 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGP 229
SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGP
Sbjct: 121 ESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGP 180
Query: 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289
SEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIFNV
Sbjct: 181 SEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNV 240
Query: 290 GNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
GNP NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIP+MT+IN
Sbjct: 241 GNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPNMTLIN 300
Query: 350 QQLGWNPKTSLWDLLESTLT 369
+QLGWNPKT L DLLE+TLT
Sbjct: 301 KQLGWNPKTPLKDLLETTLT 320
>gi|355389659|gb|AER62771.1| hypothetical protein [Psathyrostachys juncea]
gi|355389661|gb|AER62772.1| hypothetical protein [Psathyrostachys juncea]
Length = 320
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 277/320 (86%), Positives = 298/320 (93%)
Query: 50 VYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRP 109
VY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRP
Sbjct: 1 VYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRP 60
Query: 110 LDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED 169
LDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL ED
Sbjct: 61 LDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTED 120
Query: 170 ASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGP 229
SPCIFG I KQRWSYACAKQLIERLI+AEGAEN LEFTIVRPFNWIGPRMDFIPG+DGP
Sbjct: 121 ESPCIFGPIVKQRWSYACAKQLIERLIFAEGAENDLEFTIVRPFNWIGPRMDFIPGVDGP 180
Query: 230 SEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNV 289
SEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF++IKDAIEAVLLMIENPARANGHIFNV
Sbjct: 181 SEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVFIKDAIEAVLLMIENPARANGHIFNV 240
Query: 290 GNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
GNP NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS++EFYGEGYDDSDKRIPDMT+IN
Sbjct: 241 GNPDNEVTVRELAEMMTEVYAKVSGELPLEEPVIDVSAEEFYGEGYDDSDKRIPDMTLIN 300
Query: 350 QQLGWNPKTSLWDLLESTLT 369
+QLGWNPKT L DLLE+TLT
Sbjct: 301 KQLGWNPKTPLKDLLETTLT 320
>gi|355389681|gb|AER62782.1| hypothetical protein [Aegilops speltoides var. ligustica]
Length = 316
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/316 (87%), Positives = 296/316 (93%)
Query: 54 KIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTI 113
KI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTI
Sbjct: 1 KIRHLVDPPPPHLAGRIAFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTI 60
Query: 114 YSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPC 173
YSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL ED SPC
Sbjct: 61 YSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDESPC 120
Query: 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233
IFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGV
Sbjct: 121 IFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGV 180
Query: 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPH 293
PRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNP
Sbjct: 181 PRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPD 240
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLG 353
NEVTVR+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIPDMT+IN+QLG
Sbjct: 241 NEVTVRELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQLG 300
Query: 354 WNPKTSLWDLLESTLT 369
WNPKT L DLLE+TLT
Sbjct: 301 WNPKTPLKDLLETTLT 316
>gi|356544716|ref|XP_003540793.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Glycine max]
Length = 381
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 270/380 (71%), Positives = 327/380 (86%), Gaps = 3/380 (0%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R++LDG I + ICMIG GGFIGSHLCEK++ ET HK + +DV ++KI HLL+ S
Sbjct: 3 RVNLDGNSIPMLAICMIGGGGFIGSHLCEKLMAETNHKAVVVDVSSEKINHLLD-RSLPW 61
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
A RI+FH++NIK DSRLE L++ DLTINLAAI TPADYNTRPLDTI+ NFIDA+PV+KY
Sbjct: 62 AHRIEFHQMNIKSDSRLETLVQTTDLTINLAAIYTPADYNTRPLDTIFGNFIDAIPVIKY 121
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C+ENNKRLIHFSTCEVYGKTIGSFLP++ RQDP Y++LKED +PCIFG +EKQRWSYA
Sbjct: 122 CTENNKRLIHFSTCEVYGKTIGSFLPEE--YRQDPKYFMLKEDVTPCIFGPVEKQRWSYA 179
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQ+ +RLIYAE AENGL+FTIVRP+NWIGPRMDFIPG+DGPS+GVPRVLACFSN+LLR
Sbjct: 180 CAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNSLLR 239
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
+PLKLVDGG+SQRTF+YIKDAI+AV LMI+NP RANG+IFNVGNP NEV+V++LAE+M
Sbjct: 240 GEPLKLVDGGRSQRTFLYIKDAIDAVALMIDNPERANGYIFNVGNPDNEVSVKELAELMI 299
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ YAKVSG A TVDVS+++FYG+GYDDSD+RIPDMTII +QL W PKT L +LL+
Sbjct: 300 KAYAKVSGAPASSLSTVDVSAEDFYGKGYDDSDRRIPDMTIITKQLAWKPKTLLEELLDV 359
Query: 367 TLTYQHRTYAEAIKQAVAKP 386
TL YQH+TY+ AI++ ++KP
Sbjct: 360 TLQYQHKTYSRAIERELSKP 379
>gi|356539274|ref|XP_003538124.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Glycine max]
Length = 381
Score = 577 bits (1486), Expect = e-162, Method: Compositional matrix adjust.
Identities = 267/379 (70%), Positives = 326/379 (86%), Gaps = 3/379 (0%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R++LDG I + ICMIG GGFIGSHLCEK++ ET HK + +DV ++KI HLL+ S
Sbjct: 3 RVNLDGNSIPMLAICMIGGGGFIGSHLCEKLMAETNHKAVVVDVSSEKINHLLD-RSLPW 61
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
A RI+FH++NIK DSRLE L++ DLTINLAAICTPADYNTRPLDTI+SNFIDA+PV+KY
Sbjct: 62 AHRIEFHQMNIKSDSRLETLVQTTDLTINLAAICTPADYNTRPLDTIFSNFIDAIPVIKY 121
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C+ENNKRLIHFSTCEVYGKTIGSFLP++ RQDP Y++LKED +PC FG +EKQRWSYA
Sbjct: 122 CTENNKRLIHFSTCEVYGKTIGSFLPEE--YRQDPKYFMLKEDVTPCTFGPVEKQRWSYA 179
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
CAKQ+ +RLIYAE AENGL+FTIVRP+NWIGPRMDFIPG+DGP +GVPRVLACFSN+LLR
Sbjct: 180 CAKQMTDRLIYAEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPCDGVPRVLACFSNSLLR 239
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
+PLKLV+GG+SQRTF+YIKDAI+AV LMI+NP RA+GHIFNVGNP NEV+V++LAE+M
Sbjct: 240 GEPLKLVEGGRSQRTFLYIKDAIDAVALMIDNPERADGHIFNVGNPDNEVSVKELAELMI 299
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ YAKVSG A T+DVS+++FYG+GYDDSD+RIPDMTII +QL W PKT L +LL+
Sbjct: 300 KAYAKVSGVPASSLSTLDVSAEDFYGKGYDDSDRRIPDMTIITKQLAWKPKTPLDELLDV 359
Query: 367 TLTYQHRTYAEAIKQAVAK 385
TL YQH+TY+ AI++ ++K
Sbjct: 360 TLQYQHKTYSRAIQRELSK 378
>gi|355389675|gb|AER62779.1| hypothetical protein [Triticum monococcum subsp. aegilopoides]
Length = 311
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 272/311 (87%), Positives = 291/311 (93%)
Query: 59 LEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFI 118
++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFI
Sbjct: 1 VDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFI 60
Query: 119 DALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSI 178
DALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++ +YVL ED SPCIFG I
Sbjct: 61 DALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPI 120
Query: 179 EKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238
KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLA
Sbjct: 121 VKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLA 180
Query: 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTV 298
CFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNP NEVTV
Sbjct: 181 CFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTV 240
Query: 299 RQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
R+LAEMMTEVYAKVSGE LEEP +DVS+KEFYGEGYDDSDKRIPDMT+IN+QLGWNPKT
Sbjct: 241 RELAEMMTEVYAKVSGEPPLEEPVIDVSAKEFYGEGYDDSDKRIPDMTLINKQLGWNPKT 300
Query: 359 SLWDLLESTLT 369
L DLLE+TLT
Sbjct: 301 PLKDLLETTLT 311
>gi|355389641|gb|AER62762.1| hypothetical protein [Psathyrostachys juncea]
Length = 293
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 261/293 (89%), Positives = 279/293 (95%)
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
IK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN+KRLIH
Sbjct: 1 IKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIH 60
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
FSTCEVYGKTIGSFLPKD PLR++ +YVL ED SPCIFG I KQRWSYACAKQLIERLI
Sbjct: 61 FSTCEVYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLI 120
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+AEGAEN LEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLRR+PLKLVDGG
Sbjct: 121 FAEGAENDLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGG 180
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+SQRTF++IKDAIEAVLLMIENPARANGHIFNVGNP NEVTVR+LAEMMTEVYAKVSGE
Sbjct: 181 ESQRTFVFIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEL 240
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
LEEP +DVS++EFYGEGYDDSDKRIPDMT+IN+QLGWNPKT L DLLE+TLT
Sbjct: 241 PLEEPVIDVSAEEFYGEGYDDSDKRIPDMTLINKQLGWNPKTPLKDLLETTLT 293
>gi|356564739|ref|XP_003550606.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Glycine max]
Length = 319
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 253/290 (87%), Positives = 269/290 (92%), Gaps = 4/290 (1%)
Query: 100 CTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQ 159
C + +PL+ + +VKYCSENNKRLIHFST EVYGKTIGSFLPKDSPLRQ
Sbjct: 34 CLQLTRSIKPLE----GLVKIADLVKYCSENNKRLIHFSTSEVYGKTIGSFLPKDSPLRQ 89
Query: 160 DPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPR 219
DPAYYVLKED SPCIFGSIEKQRWSYACAKQLIERL+YAEGAENGLEFTIVRPFNWIGPR
Sbjct: 90 DPAYYVLKEDESPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPR 149
Query: 220 MDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279
MDFIPGIDGPSEGVPRVLACFSNNLLR +PLKLVDGGQSQRTF+YIKDAIEAVLLMIENP
Sbjct: 150 MDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP 209
Query: 280 ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSD 339
ARANGHIFNVGNP+NEVTVRQLAEMMT+VY+KVSGEA LE+PT+DVSSKEFYGEGYDDSD
Sbjct: 210 ARANGHIFNVGNPNNEVTVRQLAEMMTQVYSKVSGEAPLEKPTIDVSSKEFYGEGYDDSD 269
Query: 340 KRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
KRIPDMTIIN+QLGWNPKTSLWDLLESTLTYQHRTYAEAIK+ +AKPVAS
Sbjct: 270 KRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAKPVAS 319
>gi|355389633|gb|AER62758.1| hypothetical protein [Aegilops longissima]
Length = 269
Score = 513 bits (1321), Expect = e-143, Method: Compositional matrix adjust.
Identities = 241/269 (89%), Positives = 256/269 (95%)
Query: 101 TPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQD 160
TPADYNTRPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIGSFLPKD PLR++
Sbjct: 1 TPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIGSFLPKDHPLRKE 60
Query: 161 PAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM 220
+YVL ED SPCIFG I KQRWSYACAKQLIERL++AEGAENGLEFTIVRPFNWIGPRM
Sbjct: 61 AEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGAENGLEFTIVRPFNWIGPRM 120
Query: 221 DFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA 280
DFIPG+DGPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRTF+YIKDAIEAVLLMIENPA
Sbjct: 121 DFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRTFVYIKDAIEAVLLMIENPA 180
Query: 281 RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDK 340
RANGHIFNVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP VDVS+KEFYGEGYDDSDK
Sbjct: 181 RANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEPVVDVSAKEFYGEGYDDSDK 240
Query: 341 RIPDMTIINQQLGWNPKTSLWDLLESTLT 369
RIPDMT+IN+QLGWNPKT L DLLE+TLT
Sbjct: 241 RIPDMTLINKQLGWNPKTPLKDLLETTLT 269
>gi|355389649|gb|AER62766.1| hypothetical protein [Taeniatherum caput-medusae]
Length = 263
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/263 (90%), Positives = 252/263 (95%)
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCE
Sbjct: 1 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCE 60
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYGKTIGSFLPKD PLR++ +YVL ED SPCIFG I KQRWSYACAKQLIERL++AEGA
Sbjct: 61 VYGKTIGSFLPKDHPLRKEAEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLVFAEGA 120
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
ENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLRR+PLKLVDGG+SQRT
Sbjct: 121 ENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRT 180
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321
F+YIKDAIEAVLLMIENPARANGHIFNVGNP NEVTVR+LAEMMTEVYAKVSGE LEEP
Sbjct: 181 FVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEPPLEEP 240
Query: 322 TVDVSSKEFYGEGYDDSDKRIPD 344
+DVS+KEFYGEGYDDSDKRIPD
Sbjct: 241 VIDVSAKEFYGEGYDDSDKRIPD 263
>gi|355389679|gb|AER62781.1| hypothetical protein [Aegilops speltoides subsp. speltoides]
Length = 253
Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/253 (90%), Positives = 243/253 (96%)
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
IK+DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN+KRLIH
Sbjct: 1 IKNDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIH 60
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
FSTCEVYGKTIGSFLPKD PLR++P +YVL ED SPCIFG I KQRWSYACAKQLIERL+
Sbjct: 61 FSTCEVYGKTIGSFLPKDHPLRKEPEFYVLTEDESPCIFGPIVKQRWSYACAKQLIERLV 120
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSNNLLRR+PLKLVDGG
Sbjct: 121 FAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGG 180
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+SQRTF+YIKDAIEAVLLMIENPARANGHIFNVGNP NEVTVR+LAEMMTEVYAKVSGE
Sbjct: 181 ESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPDNEVTVRELAEMMTEVYAKVSGEP 240
Query: 317 ALEEPTVDVSSKE 329
LEEP +DVS+KE
Sbjct: 241 PLEEPVIDVSAKE 253
>gi|85376636|gb|ABC70535.1| UDP-D-apiose/UDP-D-xylose synthase [Vitis pseudoreticulata]
Length = 293
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 214/241 (88%), Positives = 224/241 (92%), Gaps = 1/241 (0%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
MA A+ RLDLDG IKP+TICMIGAGGFIGSHLCEK++ ET HK+LA+DV +DKIKHLLE
Sbjct: 1 MASAA-RLDLDGNAIKPMTICMIGAGGFIGSHLCEKLMAETMHKVLAVDVCSDKIKHLLE 59
Query: 61 PESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
P + +DRIQFHR+NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA
Sbjct: 60 PATHPWSDRIQFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 119
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
LPVVKYCSENNKRLIHFSTCEVYGKTIG FLPKDSPL QDP YY LKEDASPCIFG IEK
Sbjct: 120 LPVVKYCSENNKRLIHFSTCEVYGKTIGCFLPKDSPLWQDPTYYALKEDASPCIFGPIEK 179
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRWSYACAKQLIERLIYAEGAEN LEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF
Sbjct: 180 QRWSYACAKQLIERLIYAEGAENDLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 239
Query: 241 S 241
S
Sbjct: 240 S 240
>gi|356545493|ref|XP_003541176.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
[Glycine max]
Length = 261
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/231 (90%), Positives = 222/231 (96%)
Query: 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGP 218
+DPAYYVLKED SPCIFGSIEKQRWSYACAKQLIERL+YAEGAENGLEFTIVR FNWIGP
Sbjct: 31 KDPAYYVLKEDDSPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRSFNWIGP 90
Query: 219 RMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN 278
RMDFIPGIDGPSEGVPRVLACFSNNLLR +PLKLVDG QSQRTF+YIKDAIE VLLMIEN
Sbjct: 91 RMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGDQSQRTFVYIKDAIEVVLLMIEN 150
Query: 279 PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDS 338
PARANGHIFNVGNP+NEV VRQLAEMMT+VY+KVSGEA LE+P +DVSSKEFYGEGYDDS
Sbjct: 151 PARANGHIFNVGNPNNEVIVRQLAEMMTQVYSKVSGEAPLEKPIIDVSSKEFYGEGYDDS 210
Query: 339 DKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
DKRIPDMTIIN+QLGWNPKTSLWDLLESTLTYQHRTYAEA+K+ +AKP+AS
Sbjct: 211 DKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKVIAKPMAS 261
>gi|194466093|gb|ACF74277.1| putative dihydroflavonol reductase [Arachis hypogaea]
Length = 217
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/205 (90%), Positives = 194/205 (94%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R+DLDG PIKP+TICMIGAGGFIGSHLCEK++ ET HK+LALDVYNDKIKHLLEP++
Sbjct: 12 RVDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETQHKVLALDVYNDKIKHLLEPDNLPW 71
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
RI FHRLNIKHDSRLEGLIKM+DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY
Sbjct: 72 HGRITFHRLNIKHDSRLEGLIKMSDLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 131
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKED SPCIFGSIEKQRWSYA
Sbjct: 132 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDESPCIFGSIEKQRWSYA 191
Query: 187 CAKQLIERLIYAEGAENGLEFTIVR 211
CAKQLIERLIYAEGAENG+EFT VR
Sbjct: 192 CAKQLIERLIYAEGAENGMEFTNVR 216
>gi|106879583|emb|CAJ38375.1| nucleoside-diphopshate-sugar dehydratase [Plantago major]
Length = 202
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 179/197 (90%), Positives = 190/197 (96%)
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR +PLKL
Sbjct: 6 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRHEPLKL 65
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
VDGG+SQRTF+YIKDAIEAVLLMIENPARAN HIFNVGNP+NEVTVRQLA MMTEVY+KV
Sbjct: 66 VDGGESQRTFVYIKDAIEAVLLMIENPARANSHIFNVGNPNNEVTVRQLALMMTEVYSKV 125
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
SGE ++ PTVD+SSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDLLESTLTYQH
Sbjct: 126 SGEPPIDSPTVDISSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQH 185
Query: 373 RTYAEAIKQAVAKPVAS 389
RTYAEAIK+A +KPVAS
Sbjct: 186 RTYAEAIKKATSKPVAS 202
>gi|215809519|gb|ACJ70466.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809523|gb|ACJ70468.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809531|gb|ACJ70472.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809541|gb|ACJ70477.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809543|gb|ACJ70478.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809545|gb|ACJ70479.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
Length = 165
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 145/165 (87%), Positives = 158/165 (95%)
Query: 188 AKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247
AKQLIER+IYAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSN LLR
Sbjct: 1 AKQLIERVIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNGLLRG 60
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE 307
+PLKLVDGGQSQRTF+YIKDAIEAVLLMIENP+RANGHIFNVGNP+NE TV+QLAEMMT
Sbjct: 61 EPLKLVDGGQSQRTFLYIKDAIEAVLLMIENPSRANGHIFNVGNPNNEATVKQLAEMMTA 120
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL 352
VY+KVSG+ LEEPTVD+SS+EFYGEGYDDSDKRIPDMTII ++L
Sbjct: 121 VYSKVSGQPPLEEPTVDISSQEFYGEGYDDSDKRIPDMTIIKERL 165
>gi|215809535|gb|ACJ70474.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
Length = 165
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 144/165 (87%), Positives = 158/165 (95%)
Query: 188 AKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247
AKQLIER+IYAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSN LLR
Sbjct: 1 AKQLIERVIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNGLLRG 60
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE 307
+PLKLVDGGQSQRTF+YIKDAIEAVLLMIENP+RANGHIFNVGNP+NE TV+QLAEMMT
Sbjct: 61 EPLKLVDGGQSQRTFLYIKDAIEAVLLMIENPSRANGHIFNVGNPNNEATVKQLAEMMTA 120
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL 352
VY+KVSG+ LEEPT+D+SS+EFYGEGYDDSDKRIPDMTII ++L
Sbjct: 121 VYSKVSGQPPLEEPTLDISSQEFYGEGYDDSDKRIPDMTIIKERL 165
>gi|413951217|gb|AFW83866.1| hypothetical protein ZEAMMB73_292856 [Zea mays]
Length = 171
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 142/171 (83%), Positives = 160/171 (93%)
Query: 220 MDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP 279
MDFIPG+DGPSEGVPRVLACFSNNLLRR+PLKLVDGGQSQRTF+YIKDAIEAV+LMIENP
Sbjct: 1 MDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVVLMIENP 60
Query: 280 ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSD 339
ARANGHIFNVGNP NEVTVR+LA+MMTEVYA VSGEA L+EP +DVSS +FYGEGYDDSD
Sbjct: 61 ARANGHIFNVGNPDNEVTVRELAQMMTEVYANVSGEAPLDEPMIDVSSSQFYGEGYDDSD 120
Query: 340 KRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVASS 390
KRIPDMTIIN+QLGWNPKT L DLLE+TLTYQH+TY EA+K+ +++ A+S
Sbjct: 121 KRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAVKRQMSQASATS 171
>gi|215809527|gb|ACJ70470.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
Length = 155
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/155 (87%), Positives = 148/155 (95%)
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
AEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSN LLR +PLKLVDGGQ
Sbjct: 1 AEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNGLLRGEPLKLVDGGQ 60
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
SQRTF+YIKDAIEAVLLMIENP+RANGHIFNVGNP+NE TV+QLAEMMT VY+KVSG+
Sbjct: 61 SQRTFLYIKDAIEAVLLMIENPSRANGHIFNVGNPNNEATVKQLAEMMTAVYSKVSGQPP 120
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL 352
LEEPTVD+SS+EFYGEGYDDSDKRIPDMTII ++L
Sbjct: 121 LEEPTVDISSQEFYGEGYDDSDKRIPDMTIIKERL 155
>gi|261416694|ref|YP_003250377.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|385791535|ref|YP_005822658.1| putative dehydrogenase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373150|gb|ACX75895.1| NAD-dependent epimerase/dehydratase [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|302325990|gb|ADL25191.1| putative dehydrogenase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 348
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 211/355 (59%), Gaps = 28/355 (7%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+T+ ++G GGFIG HL + IL T ++ +D+ +I+H L E R +F ++
Sbjct: 10 ITVAVVGCGGFIGCHLLDAILTRTKWRVFGVDLDFYRIQHRLNDE------RCEFMVADL 63
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
S +E + K + +NLAAIC P+ Y + I SN+ + C+++ LIHF
Sbjct: 64 ADKSVVERIAKYP-IVVNLAAICVPSRYMAEAPEVIRSNYDHPAALADACAKSGSWLIHF 122
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST E+YG+T DS L L ED S FG + RWSYA AK L ER Y
Sbjct: 123 STSEIYGRT-----SADSGL--------LVEDESELTFGPVMASRWSYATAKLLTER--Y 167
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G +N L++T+VRPFN++GP MDF+PG+DG G+PRVLA FS+ L+R +PLKLV+GG
Sbjct: 168 IAGLQN-LKWTVVRPFNFVGPFMDFMPGVDG--SGIPRVLANFSSALVRGEPLKLVNGGV 224
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
++R+F + DA++ + + E A FN+GNP NE+T+ +LA M +++A++ G +
Sbjct: 225 AKRSFTSVFDAVDFMFALFEACDVAFSQAFNIGNPDNELTIAELANKMCKIFAEIKGVSV 284
Query: 318 --LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ EP V VS E+YGEGY+DS +R+P + + LG+ KT + +L +LT+
Sbjct: 285 ETIPEPEV-VSGVEYYGEGYEDSMRRLPSVEKAERLLGFKAKTPIDVVLRESLTW 338
>gi|297816930|ref|XP_002876348.1| hypothetical protein ARALYDRAFT_907047 [Arabidopsis lyrata subsp.
lyrata]
gi|297834514|ref|XP_002885139.1| hypothetical protein ARALYDRAFT_897951 [Arabidopsis lyrata subsp.
lyrata]
gi|297849496|ref|XP_002892629.1| hypothetical protein ARALYDRAFT_888425 [Arabidopsis lyrata subsp.
lyrata]
gi|297322186|gb|EFH52607.1| hypothetical protein ARALYDRAFT_907047 [Arabidopsis lyrata subsp.
lyrata]
gi|297330979|gb|EFH61398.1| hypothetical protein ARALYDRAFT_897951 [Arabidopsis lyrata subsp.
lyrata]
gi|297338471|gb|EFH68888.1| hypothetical protein ARALYDRAFT_888425 [Arabidopsis lyrata subsp.
lyrata]
Length = 137
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/136 (83%), Positives = 126/136 (92%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
MIGAGGFIGSHLCEK+++ETP K+LALDVYN+KIKHLLEP++ + RIQFHR+NIKHDS
Sbjct: 1 MIGAGGFIGSHLCEKLMMETPQKVLALDVYNEKIKHLLEPDTVEWSGRIQFHRINIKHDS 60
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
RLEGLIKMADLTI+LA ICTPADYNT PL+TIY+NFIDA PVVKYCSENNKRLIHFSTCE
Sbjct: 61 RLEGLIKMADLTIHLAVICTPADYNTLPLETIYNNFIDARPVVKYCSENNKRLIHFSTCE 120
Query: 142 VYGKTIGSFLPKDSPL 157
VYGKT GSFLPKD PL
Sbjct: 121 VYGKTTGSFLPKDHPL 136
>gi|365874335|ref|ZP_09413868.1| LOW QUALITY PROTEIN: nucleoside-diphosphate-sugar epimerase
[Thermanaerovibrio velox DSM 12556]
gi|363984422|gb|EHM10629.1| LOW QUALITY PROTEIN: nucleoside-diphosphate-sugar epimerase
[Thermanaerovibrio velox DSM 12556]
Length = 333
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 207/358 (57%), Gaps = 30/358 (8%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR--LN 76
+ ++GA GFIGSHLCEK+L T ILALD+ +D ++HL+ G R +F ++
Sbjct: 3 NLLILGANGFIGSHLCEKVLEHTDWGILALDIRHDNLEHLM------GNPRFRFQEAPMS 56
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
D EG IK + + LA I PA Y PL T +F + L VV+ C+E + ++
Sbjct: 57 KAWDWIQEG-IKDSFAVVPLAGIARPAMYIEDPLFTYELDFEENLKVVRACAEAKRWVVF 115
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + DP L ED SP + G I RW Y+C+KQ+++R+I
Sbjct: 116 PSTSEVYG------------MSPDPE---LNEDESPLVLGPIRNVRWIYSCSKQMMDRVI 160
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G GL FT+ RPFNWIGPR D P + VP++L NL+RR+PL+LV+GG
Sbjct: 161 WALGQSKGLPFTLFRPFNWIGPRQD-DPRTPTGNRLVPQLLG----NLMRREPLRLVNGG 215
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG-E 315
+R+F I++ + ++ +++ P + G IFN+GNP N +VR++AE + + ++V G E
Sbjct: 216 TQRRSFTDIEEGVMGIMAILKQPEASVGEIFNLGNPKNNHSVREVAEALRQEVSRVKGYE 275
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
LE P V+VS +E YG+GY+D R+P + +L W PK SL D L T+ Y R
Sbjct: 276 DVLEVPIVEVSGEEHYGKGYEDVKDRLPSIAKAVNKLHWEPKLSLRDTLRKTVDYYLR 333
>gi|197119355|ref|YP_002139782.1| NAD-dependent epimerase/dehydratase family protein [Geobacter
bemidjiensis Bem]
gi|197088715|gb|ACH39986.1| UDP-glucuronate 4-dehydrogenase, decarboxylating [Geobacter
bemidjiensis Bem]
Length = 346
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 135/358 (37%), Positives = 208/358 (58%), Gaps = 30/358 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + ++G GFIG+ L +IL T ++ LD+ +DK+ E G R F +I
Sbjct: 1 MKVLILGVNGFIGNALTHRILTTTDWEVFGLDMASDKL------ERSIGNSRFHFLEGDI 54
Query: 78 KHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ +E IK D+ + L AI TP Y PL +F + L +++ C++ NKR+I
Sbjct: 55 TINKEWIEYNIKKCDVVLPLVAIATPITYVKDPLRVFELDFEENLKIIRLCAKYNKRIIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG SP R+ E+ SP + G I K+RW Y+CAKQ+++R+I
Sbjct: 115 PSTSEVYGM---------SPDRE------FDEENSPLMLGPINKERWIYSCAKQMLDRVI 159
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
YA GA GL +T+ RPFNWIGP++D I EG RVL F N+L +P++LVDGG
Sbjct: 160 YAYGAHEGLRYTLFRPFNWIGPKLD---SISTAKEGSSRVLTQFLYNILAGEPIQLVDGG 216
Query: 257 QSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE---MMTEVYAKV 312
+ +R+F +++D I+ ++ +IEN A+ IFN+GNP N+++V++LA M + Y +
Sbjct: 217 EQRRSFTFLEDGIDCLMRIIENRDGCADSGIFNIGNPDNDLSVKELAHKLVAMVQQYPEY 276
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
E AL P ++VSS ++YG+GY D R+P + +LGW P+T++ D L+ TL +
Sbjct: 277 R-EKALACPIIEVSSAQYYGKGYQDMLNRVPSVKNAKARLGWEPRTTVDDALKETLDF 333
>gi|257094846|ref|YP_003168487.1| NAD-dependent epimerase/dehydratase family protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047370|gb|ACV36558.1| NAD-dependent epimerase/dehydratase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 347
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 133/366 (36%), Positives = 203/366 (55%), Gaps = 30/366 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL + I+ T ++ +D+ ++++ LL G +R F +I
Sbjct: 4 VLILGVNGFIGHHLSQSIIASTDWEVYGMDLNSERVADLL------GHERFHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+E ++ D+ + L AI TPA Y PL +F LP+V+ + KR+I S
Sbjct: 58 SKEWIEYHVRKCDVILPLVAIATPATYVKEPLRVFELDFEANLPIVRQAVKYRKRVIFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + QDP + + SP ++G I K RW YACAKQ+++R+I+A
Sbjct: 118 TSEVYG------------MCQDPEF---DPENSPLVYGPINKPRWIYACAKQMMDRVIHA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL++T++RPFNWIGP +D I P EG RV+ F +++R +P+KLVDGG
Sbjct: 163 YGQQEGLQYTLIRPFNWIGPGLD---SIHTPKEGSSRVITQFLGHIVRGEPIKLVDGGAQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV---YAKVSG 314
+R+F Y+ D I+A++ +IEN ANG I+N+GNP N ++R+LA +M ++ Y + +
Sbjct: 220 KRSFTYVSDGIDALMKIIENKDGVANGKIYNIGNPKNNYSIRELATLMLDLAREYPEYAA 279
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
AA ++ SS E+YG GY D+ R+P + LGW PK D L
Sbjct: 280 SAARVR-VLETSSAEYYGSGYQDTFHRVPKIDNTRTDLGWEPKVRFEDALRGIFEAYRGD 338
Query: 375 YAEAIK 380
AEA K
Sbjct: 339 VAEARK 344
>gi|406943090|gb|EKD75162.1| hypothetical protein ACD_44C00206G0001 [uncultured bacterium]
Length = 340
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/359 (38%), Positives = 195/359 (54%), Gaps = 31/359 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQ--TGADRIQFHR 74
+ + +IGA GFIGSHL IL P I+ALD+ +K L S D Q
Sbjct: 1 MKVLIIGASGFIGSHLIANILTSKPSWNIVALDIQQHNLKDYLSHPSLHFVSGDMTQMQ- 59
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
S +E I++ D+ + LAAI TPA Y PL +F L +VK C ++ KR+
Sbjct: 60 ------SWIEEQIQICDVVLPLAAIATPATYVQDPLKIFSLDFEANLEIVKLCVKHKKRI 113
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG + D+ E+ S I G I K+RW YAC+KQL++R
Sbjct: 114 VFPSTSEVYG------MCNDTEF---------DEEKSNLILGPIHKERWIYACSKQLMDR 158
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
LI+A NGL +T+ RPFNWIGP+ D I G RV+ F N++R++ ++LV+
Sbjct: 159 LIFAYSNHNGLPYTLFRPFNWIGPKQD---DISNKKLGGSRVVTQFLGNIIRKENIQLVE 215
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GG R+FIYI DAIEA++ +IEN A IFN+GNPHN ++R+LA+M+ + +
Sbjct: 216 GGNQYRSFIYIDDAIEALIKIIENENECATQRIFNIGNPHNIASIRELAQMLLSIAKQHP 275
Query: 314 G--EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ A E +DV +KE+YG GY D R+P + L W P+T L L T+ Y
Sbjct: 276 SFEQHATEIELIDVPAKEYYGAGYQDVQARVPSIWRAQTHLQWQPRTDLHTALSKTVEY 334
>gi|404495743|ref|YP_006719849.1| NAD-dependent epimerase/dehydratase family protein [Geobacter
metallireducens GS-15]
gi|418066389|ref|ZP_12703753.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens
RCH3]
gi|78193358|gb|ABB31125.1| UDP-glucuronate 4-dehydrogenase, decarboxylating [Geobacter
metallireducens GS-15]
gi|373560650|gb|EHP86907.1| NAD-dependent epimerase/dehydratase [Geobacter metallireducens
RCH3]
Length = 346
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 203/357 (56%), Gaps = 28/357 (7%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ I ++G GFIG+ L ++IL T ++ LD+ ++K++H G R F +I
Sbjct: 1 MKILILGVNGFIGNALTKRILDTTDWEVYGLDMSDNKLEH------SIGHPRFHFLEGDI 54
Query: 78 KHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ +E IK D+ + L AI TP Y PL +F + L +++ C + KR+I
Sbjct: 55 TINKEWIEYNIKKCDVVLPLVAIATPVTYVKDPLRVFELDFEENLKIIRQCVKYKKRVIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG SP R+ E+ SP + G I KQRW Y+CAKQ+++R+I
Sbjct: 115 PSTSEVYGM---------SPDRE------FDEENSPLMLGPINKQRWIYSCAKQMLDRVI 159
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
YA G + GL +T+ RPFNWIGP++D I EG RVL F N+L +P++LVDGG
Sbjct: 160 YAYGEQEGLRYTLFRPFNWIGPKLD---SISTAKEGSSRVLTQFLYNILAGEPIQLVDGG 216
Query: 257 QSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+R+F +++D I+ ++ +IEN A+G IFN+GNP N+++V++LAE + + +
Sbjct: 217 NQRRSFTFVEDGIDCLMKIIENKDGSADGGIFNIGNPGNDLSVKELAEKLITLVKEYPAY 276
Query: 316 AALEEP--TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
E ++VSS +FYG+GY D R+P + +LGW PKT + D L TL +
Sbjct: 277 RDRAEACRIIEVSSGQFYGKGYQDMLTRVPSVKNAKARLGWEPKTVIDDALRKTLDF 333
>gi|182413232|ref|YP_001818298.1| NAD-dependent epimerase/dehydratase [Opitutus terrae PB90-1]
gi|177840446|gb|ACB74698.1| NAD-dependent epimerase/dehydratase [Opitutus terrae PB90-1]
Length = 345
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 205/365 (56%), Gaps = 30/365 (8%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76
P+ + ++G GFIGS L IL ++ +D+ + K+ E R +F +
Sbjct: 2 PLKVLILGVNGFIGSSLTRAILKHKDWEVYGMDIGSHKL------EDSLNHPRFKFVEGD 55
Query: 77 IK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I + +E +K D+ I L AI P Y PL +F L VV+ C++ KR+I
Sbjct: 56 ITINREYIEYHVKKCDVVIPLVAIANPIQYVKDPLRVFELDFEANLDVVRKCAKYRKRII 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG SP R+ L E S ++G IE+QRW YAC+KQL++R+
Sbjct: 116 FPSTSEVYGM---------SPDRE------LNEATSALVYGPIERQRWIYACSKQLLDRV 160
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
IYA G + +++T+ RPFNWIGP++D + P EG R+ F +N++ ++PL+LVDG
Sbjct: 161 IYAYGVRDNVDYTLFRPFNWIGPKLD---DVMEPKEGSSRLFTQFISNVIFQKPLQLVDG 217
Query: 256 GQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS- 313
G+ R+F +I D I+A+L +IEN A+ IFN+GNP NEV+V QLA+++ +
Sbjct: 218 GRQTRSFTFIDDGIDALLRIIENKDGCASRQIFNLGNPKNEVSVVQLAKLIIAAFKDYPD 277
Query: 314 -GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ- 371
E + TV V S +++G+ Y D KR+P +T ++LGW PK +L + ++ TL Y
Sbjct: 278 YAEHVAKAKTVVVPSGKYFGKYYQDIQKRVPSITNATKRLGWKPKVALREAIKRTLDYHL 337
Query: 372 -HRTY 375
H+ Y
Sbjct: 338 AHKDY 342
>gi|189426676|ref|YP_001953853.1| NAD-dependent epimerase/dehydratase family protein [Geobacter
lovleyi SZ]
gi|189422935|gb|ACD97333.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
Length = 346
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/357 (36%), Positives = 203/357 (56%), Gaps = 28/357 (7%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + ++G GFIG+ L +IL T ++ LD+ DK+ E G +R F +I
Sbjct: 1 MKVLILGVNGFIGNALTHRILTTTDWEVYGLDMACDKL------ERSLGHERFHFLEGDI 54
Query: 78 KHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ +E IK D+ + L AI TP Y PL +F + L +++ C ++ KR+I
Sbjct: 55 TINKEWIEYHIKKCDVVLPLVAIATPVTYVKDPLRVFELDFEENLKIIRQCVKHKKRVIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG SP + E+ SP + G I K+RW Y+CAKQ+++R+I
Sbjct: 115 PSTSEVYGM---------SPDAE------FDEENSPLVLGPIAKERWIYSCAKQMLDRVI 159
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
YA G +FT+ RPFNWIGP++D I EG RVL F ++L +P++LVDGG
Sbjct: 160 YAYGNHENFKFTLFRPFNWIGPKLD---SIHTAKEGSSRVLTQFLYDILAEKPIELVDGG 216
Query: 257 QSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VS 313
+R+F +I+D I+A++ +IEN A+G IFN+GNP+N+++V++LAE + ++ A +
Sbjct: 217 NQRRSFTFIEDGIDALMKIIENRNGCADGKIFNIGNPNNDLSVKELAEKLRDMVATFPLY 276
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
E A + V+ SS FYG+GY D R+P + + LGW P T++ D L TL +
Sbjct: 277 KEKADKCRIVETSSDSFYGKGYQDMLTRVPSVKRAKECLGWEPTTTIDDALRKTLEF 333
>gi|194289455|ref|YP_002005362.1| NAD-dependent epimerase/dehydratase [Cupriavidus taiwanensis LMG
19424]
gi|193223290|emb|CAQ69295.1| putative NAD-dependent epimerase/dehydratase; putative
formyltransferase [Cupriavidus taiwanensis LMG 19424]
Length = 351
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 199/346 (57%), Gaps = 30/346 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL TP ++ +D+ D++ L+E R+ F +I
Sbjct: 6 VLILGVNGFIGHHLTRRILETTPWEVYGMDMNTDRLGDLVE------HPRMHFFEGDITI 59
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 60 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 119
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D A+ DASP ++G I K RW YAC+KQL++R+I+A
Sbjct: 120 TSEVYG------------MCSDEAF---DPDASPLVYGPISKPRWIYACSKQLMDRVIHA 164
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL++T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 165 YGMEQGLDYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 221
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEV---YAKVSG 314
QR F I D I A++ +IENP A+G I+N+GNP N +VR+LAEMM ++ Y + +
Sbjct: 222 QRAFADIADGISALMRIIENPGGVASGKIYNIGNPGNIHSVRELAEMMLKMAADYPEYAQ 281
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
+A L + V+ SS +FYG+GY D R+P + ++LGW P+ +
Sbjct: 282 QARLTK-IVETSSGDFYGKGYQDVQHRVPKIDNTIEELGWRPEIGM 326
>gi|238898044|ref|YP_002923725.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229465803|gb|ACQ67577.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 670
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 198/371 (53%), Gaps = 31/371 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L +++ LD+ ++ I L+ R F +I
Sbjct: 321 VLILGVNGFIGNHLTERLLQSDQYEVYGLDIDSEAISRLM------SNPRFHFMEGDISI 374
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK DL + L AI TP +Y PL +F + L +V+YC + +KR++ S
Sbjct: 375 HSEWIEYHIKKCDLILPLVAIATPIEYTRNPLRVFELDFEENLRIVRYCVKYHKRIVFPS 434
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D A+ ED SP I G I KQRW Y+ +KQL++R+I+A
Sbjct: 435 TSEVYG------------MCHDKAF---NEDTSPLIVGPINKQRWIYSASKQLLDRVIWA 479
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D + G R + NL+ P+KL+DGG+
Sbjct: 480 YGEKEGLKFTLFRPFNWMGPRLD---NLHSARIGSSRAITQLILNLVEGTPIKLIDGGEQ 536
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
+R F I D +EA+ +IEN NG I N+GNPHNE ++ +L M+ E + K E
Sbjct: 537 KRCFTDINDGVEALFRIIENGESCNGKIINIGNPHNEASISKLGRMLLESFEK--HELRH 594
Query: 319 EEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P + S +YG+GY D + R P + + L W P+ S+ + +E TL + R+
Sbjct: 595 HFPPFAGFKTIESSAYYGKGYQDVEHRTPSIHNARRLLNWAPRISIEETIEKTLDFFLRS 654
Query: 375 YAEAIKQAVAK 385
+ K+ K
Sbjct: 655 AVQEQKRLQVK 665
>gi|269791893|ref|YP_003316797.1| NAD-dependent epimerase/dehydratase [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269099528|gb|ACZ18515.1| NAD-dependent epimerase/dehydratase [Thermanaerovibrio
acidaminovorans DSM 6589]
Length = 332
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 203/353 (57%), Gaps = 28/353 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++GA GFIGSHLCEKIL T +I ALDV + + +LE + R++F +
Sbjct: 4 VLILGANGFIGSHLCEKILEHTDWEICALDVGSHNLSGVLE------SPRVEFVESPMGS 57
Query: 80 D-SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ + A + LA I PA Y PL T +F + L VV+ C+E + +I S
Sbjct: 58 AWDWIRDRAREAFAVVPLAGIARPAMYIEDPLYTYELDFEENLKVVRICAELRQWVIFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P R+ LKED S + G I RW Y+C+KQ+++R+I+A
Sbjct: 118 TSEVYGMC---------PDRE------LKEDESNLVLGPIRNVRWIYSCSKQMMDRVIWA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G GL FT+ RPFNWIGPR D P + VP++L N++RR+P++LV+GG
Sbjct: 163 MGISKGLPFTLFRPFNWIGPRQD-DPRTPKGNRLVPQMLG----NIIRREPIRLVNGGHQ 217
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG-EAA 317
+R+F I++ + +L ++ NP A G IFN+GNP N +VR++A + +++ G E A
Sbjct: 218 RRSFTDIEEGVMGILSILRNPDAAVGEIFNLGNPRNNHSVREVALALVRAASRIPGYEYA 277
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
LE P V+VS +E YG+GY+D R+P + +LGW PK +L ++L+ T+ Y
Sbjct: 278 LEIPLVEVSGEEHYGKGYEDVQDRLPSVDKAASKLGWVPKATLDEILDRTVRY 330
>gi|293396355|ref|ZP_06640633.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Serratia
odorifera DSM 4582]
gi|291421144|gb|EFE94395.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Serratia
odorifera DSM 4582]
Length = 440
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 136/365 (37%), Positives = 193/365 (52%), Gaps = 28/365 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E ++I LD+ +D I + G F +I
Sbjct: 98 VLILGVNGFIGNHLTERLLREDSYEIYGLDIGSDAISRFM------GNPHFHFVEGDISI 151
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 152 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 211
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 212 TSEVYG------------MCDDKQF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 256
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 257 YGVKEGLRFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 313
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN R +G I N+GNP NE ++R+LAEM+ E + +
Sbjct: 314 KRCFTDINDGIEALFRIIENRDGRCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDR 373
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
DV S +YG+GY D + R P + + L W P ++ + TL Y RT
Sbjct: 374 FPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLDWQPTIAMQQTVADTLDYFLRTT 433
Query: 376 AEAIK 380
AEA K
Sbjct: 434 AEAGK 438
>gi|422022534|ref|ZP_16369041.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia sneebia DSM 19967]
gi|414095704|gb|EKT57364.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia sneebia DSM 19967]
Length = 660
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 194/355 (54%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDDYDIYGMDISSSAIDRFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC++ NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCAKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDESRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F IKD IEA+ +IEN + +G I N+GNP NE ++RQLAEM+ E + + G
Sbjct: 534 KRCFTDIKDGIEALFRIIENKDGKCDGQIINIGNPTNEASIRQLAEMLLECFENHPLRGN 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++ S +YG+GY D + R P + + L W P + D +E TL +
Sbjct: 594 FPPFAGFREIESSSYYGKGYQDVEHRKPSIENARRLLDWTPTIDMKDTVEETLGF 648
>gi|73537807|ref|YP_298174.1| NAD-dependent epimerase/dehydratase [Ralstonia eutropha JMP134]
gi|72121144|gb|AAZ63330.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid
dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase
[Ralstonia eutropha JMP134]
Length = 350
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 203/367 (55%), Gaps = 32/367 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL T ++ +D+ +D++ L++ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLTRRILETTSWEVYGMDMSSDRLGDLVD------HPRMHFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D DP ++SP I+G I K RW YAC+KQL++R+I+A
Sbjct: 118 TSEVYG------MCADDEF--DP-------ESSPLIYGPINKPRWIYACSKQLMDRVIHA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG+
Sbjct: 163 YGMEQGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGEQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
+R F I D I A++ +IENP A G IFN+GNP N +VR+LAEMM ++ A E
Sbjct: 220 KRAFADISDGISALMRIIENPNGIATGKIFNIGNPSNIHSVRELAEMMLKMAADYPEYAE 279
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
A + V+ SS +FYG+GY D R+P + Q+LGW P+ + +E L Y
Sbjct: 280 EARKTQIVETSSGDFYGKGYQDVQHRVPKIDNTMQELGWKPEVT----MEQALRRIFEAY 335
Query: 376 AEAIKQA 382
E + +A
Sbjct: 336 REKVVEA 342
>gi|183598828|ref|ZP_02960321.1| hypothetical protein PROSTU_02260 [Providencia stuartii ATCC 25827]
gi|386745181|ref|YP_006218360.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia stuartii MRSN 2154]
gi|188021036|gb|EDU59076.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia stuartii ATCC 25827]
gi|384481874|gb|AFH95669.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia stuartii MRSN 2154]
Length = 660
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 194/355 (54%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYDIYGMDISSSAIDRFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDESRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F IKD IEA+ +IEN + +G I N+GNP NE ++RQLAEM+ E + K + G
Sbjct: 534 KRCFTDIKDGIEALFRIIENKDGKCDGQIINIGNPTNEASIRQLAEMLLESFEKHPLRGH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++ S +YG+GY D + R P + + L W P + D +E TL +
Sbjct: 594 FPPFAGFREIESSSYYGKGYQDVEHRKPSVENARRLLDWVPTIDMKDTIEETLDF 648
>gi|116695581|ref|YP_841157.1| NAD-dependent epimerase/dehydratase family protein [Ralstonia
eutropha H16]
gi|113530080|emb|CAJ96427.1| dTDP-glucose 4-6-dehydratase [Ralstonia eutropha H16]
Length = 350
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 196/345 (56%), Gaps = 28/345 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL TP ++ +D+ +D++ L++ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLTRRILETTPWEVYGMDMSSDRLGDLVD------HPRMHFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG S DP +ASP ++G I K RW YAC+KQL++R+I+A
Sbjct: 118 TSEVYGMC--------SDEEFDP-------EASPLVYGPINKPRWIYACSKQLMDRVIHA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 163 YGMEQGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
QR F I D I+A++ +IENP A+G I+N+GNP N +VR+LAEMM ++ A E
Sbjct: 220 QRAFADIADGIDALMRIIENPNGVASGKIYNIGNPGNIHSVRELAEMMLKMAADYPEYAE 279
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
A + ++ SS +FYG+GY D R+P + ++LGW P S+
Sbjct: 280 EARKTQIIETSSGDFYGKGYQDVQHRVPRIDNTIEELGWKPGISM 324
>gi|403059403|ref|YP_006647620.1| NAD-dependent epimerase/dehydratase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402806729|gb|AFR04367.1| NAD-dependent epimerase/dehydratase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 677
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 191/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 329 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISI 382
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ S
Sbjct: 383 HNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPS 442
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 443 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 487
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 488 YGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 544
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L EM+ + +
Sbjct: 545 KRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDR 604
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+DV S +YG+GY D + R P + + L W P + + TL Y RT
Sbjct: 605 FPPFAGFIDVESSSYYGKGYQDVEHRTPSIRNAKRLLAWEPTVKMDQTVAETLDYFLRT 663
>gi|261344004|ref|ZP_05971649.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Providencia rustigianii DSM 4541]
gi|282568395|gb|EFB73930.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Providencia rustigianii DSM 4541]
Length = 661
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 133/367 (36%), Positives = 198/367 (53%), Gaps = 35/367 (9%)
Query: 15 IKPVT-------ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGA 67
IKP T + ++G GFIG+HL E++L + + I +D+ + I+ + G
Sbjct: 306 IKPTTQVKRRKRVLILGVNGFIGNHLTERLLQDDNYDIYGMDIGSSAIERFI------GN 359
Query: 68 DRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
R F ++ H +E IK D+ + L AI TP +Y PL +F + L +V+Y
Sbjct: 360 PRFHFIEGDVSIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRY 419
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C + NKR+I ST EVYG + D + ED S I G I KQRW Y+
Sbjct: 420 CVKYNKRIIFPSTSEVYG------------MCDDKEF---DEDESRLIVGPISKQRWIYS 464
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
+KQL++R+I+A GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+
Sbjct: 465 VSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVE 521
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMM 305
P+KLVDGG +R F IKD IEA+ +IEN + +G I N+GNP NE ++RQLAEM+
Sbjct: 522 GSPIKLVDGGAQKRCFTDIKDGIEALFRIIENKDGKCDGQIINIGNPTNEASIRQLAEML 581
Query: 306 TEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
E + K G+ ++ S +YG+GY D + R P + + L W P + D
Sbjct: 582 LESFEKHPARGKFPPFAGFREIESASYYGQGYQDVEHRKPSVENARRLLNWVPTIDMKDT 641
Query: 364 LESTLTY 370
++ TL +
Sbjct: 642 IDETLDF 648
>gi|212711450|ref|ZP_03319578.1| hypothetical protein PROVALCAL_02523 [Providencia alcalifaciens DSM
30120]
gi|422018439|ref|ZP_16364996.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia alcalifaciens Dmel2]
gi|212685906|gb|EEB45434.1| hypothetical protein PROVALCAL_02523 [Providencia alcalifaciens DSM
30120]
gi|414104731|gb|EKT66296.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia alcalifaciens Dmel2]
Length = 661
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 193/355 (54%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L VV+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKVVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDESRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F IKD IEA+ +IEN + +G I N+GNP NE ++RQLAEM+ E + K +
Sbjct: 534 KRCFTDIKDGIEALFRIIENKDGKCDGQIINIGNPTNEASIRQLAEMLLESFEKHPARSK 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++ S +YG+GY D + R P + + L W P + D +E TL +
Sbjct: 594 FPPFAGFREIESASYYGQGYQDVEHRKPSVENARRLLDWVPTIDMKDTIEETLDF 648
>gi|148265718|ref|YP_001232424.1| NAD-dependent epimerase/dehydratase family protein [Geobacter
uraniireducens Rf4]
gi|146399218|gb|ABQ27851.1| NAD-dependent epimerase/dehydratase [Geobacter uraniireducens Rf4]
Length = 346
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 203/359 (56%), Gaps = 32/359 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + ++G GFIG+ L ++IL T ++ LD+ ++K++H G R F +I
Sbjct: 1 MKVLILGVNGFIGNALTKRILDTTDWEVYGLDMSDNKLEH------SIGHPRFHFLEGDI 54
Query: 78 KHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ +E IK D+ + L AI TP Y PL +F + L +++ C++ NKR+I
Sbjct: 55 TINKEWIEYNIKKCDVVLPLVAIATPVTYVRDPLRVFELDFEENLKIIRQCAKYNKRVIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG SP R+ E+ SP G I K+RW Y+CAKQ+++R+I
Sbjct: 115 PSTSEVYGM---------SPDRE------FDEETSPLTLGPINKERWIYSCAKQMLDRVI 159
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
YA G GL++T+ RPFNWIGP++D I EG RVL F N+L +P+ LVDGG
Sbjct: 160 YAYGEHEGLQYTLFRPFNWIGPKLD---SISTAKEGSSRVLTQFLYNILAGEPISLVDGG 216
Query: 257 QSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLA----EMMTEVYAK 311
+R+F +++D I+ ++ +I+N A+ IFN+GNP N+++V++LA +MM E Y
Sbjct: 217 NQRRSFTFVEDGIDCLMRIIDNKDGCADRGIFNIGNPGNDLSVKELAIKLRDMMKE-YPD 275
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A V+V+S FYG+GY D R+P + ++LGW PKT + D L TL +
Sbjct: 276 YRDRAE-NCQIVEVTSDTFYGKGYQDMLTRVPSVKNARERLGWEPKTGIDDALRKTLEF 333
>gi|339325587|ref|YP_004685280.1| bifunctional polymyxin resistance protein ArnA [Cupriavidus necator
N-1]
gi|338165744|gb|AEI76799.1| bifunctional polymyxin resistance protein ArnA [Cupriavidus necator
N-1]
Length = 351
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 196/345 (56%), Gaps = 28/345 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I ++G GFIG HL +IL TP ++ +D+ +D++ L++ R+ F +I
Sbjct: 6 ILILGVNGFIGHHLTRRILETTPWEVYGMDMSSDRLGDLVD------HPRMHFFEGDITI 59
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 60 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 119
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG S DP +ASP ++G I K RW YAC+KQL++R+I+A
Sbjct: 120 TSEVYGMC--------SDEEFDP-------EASPLVYGPINKPRWIYACSKQLMDRVIHA 164
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 165 YGMEQGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 221
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
QR F I D I+A++ +IENP A+G I+N+GNP N +VR+LAEMM ++ A +
Sbjct: 222 QRAFADIADGIDALMRIIENPNGVASGKIYNIGNPGNIHSVRELAEMMLKMAADYPEYAD 281
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
A + ++ SS +FYG+GY D R+P + ++LGW P S+
Sbjct: 282 EARKTQIIETSSGDFYGKGYQDVQHRVPKIDNTIEELGWKPGISM 326
>gi|330817209|ref|YP_004360914.1| hypothetical protein bgla_1g23310 [Burkholderia gladioli BSR3]
gi|327369602|gb|AEA60958.1| hypothetical protein bgla_1g23310 [Burkholderia gladioli BSR3]
Length = 351
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 197/358 (55%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYRKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F Y+ D I A++ +IENP A+G I+N+GNPHN +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTYVDDGISALMKIIENPDGIASGKIYNIGNPHNNYSVRELANKMLELAAEF 275
Query: 313 SGEAALEEPT--VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
AA + V+ +S +YG GY D R+P + Q+LGW P+++ D L +
Sbjct: 276 PEYAASAKQVQLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQSTFDDALRNIF 333
>gi|227112828|ref|ZP_03826484.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 677
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 191/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 329 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISI 382
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ S
Sbjct: 383 HNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPS 442
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 443 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 487
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 488 YGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 544
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L EM+ + +
Sbjct: 545 KRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDR 604
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+DV S +YG+GY D + R P + + L W P + + TL Y RT
Sbjct: 605 FPPFAGFIDVESSSYYGKGYQDVEHRTPSIRNAKRLLAWEPMVKMDQTVAETLDYFLRT 663
>gi|339322929|ref|YP_004681823.1| bifunctional polymyxin resistance protein ArnA [Cupriavidus necator
N-1]
gi|338169537|gb|AEI80591.1| bifunctional polymyxin resistance protein ArnA [Cupriavidus necator
N-1]
Length = 350
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 196/345 (56%), Gaps = 28/345 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL TP ++ +D+ +D++ L++ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLTRRILETTPWEVYGMDMSSDRLGDLVD------HPRMHFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG S DP +ASP ++G I K RW YAC+KQL++R+I+A
Sbjct: 118 TSEVYGMC--------SDEEFDP-------EASPLVYGPINKPRWIYACSKQLMDRVIHA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 163 YGMEQGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
QR F I D I+A++ +IENP A+G I+N+GNP N +VR+LAEMM ++ A +
Sbjct: 220 QRAFADIADGIDALMRIIENPNGVASGKIYNIGNPGNIHSVRELAEMMLKMAADYPEYAD 279
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
A + ++ SS +FYG+GY D R+P + ++LGW P S+
Sbjct: 280 EARKTQIIETSSGDFYGKGYQDVQHRVPKIDNTIEELGWKPGISM 324
>gi|227329452|ref|ZP_03833476.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 666
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 191/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ S
Sbjct: 372 HNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L EM+ + +
Sbjct: 534 KRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+DV S +YG+GY D R P + + L W P + + TL Y RT
Sbjct: 594 FPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 652
>gi|73541029|ref|YP_295549.1| NAD-dependent epimerase/dehydratase family protein [Ralstonia
eutropha JMP134]
gi|72118442|gb|AAZ60705.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid
dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase
[Ralstonia eutropha JMP134]
Length = 355
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 196/345 (56%), Gaps = 28/345 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL T ++ +D+ +D++ L++ R+ F +I
Sbjct: 12 VLILGVNGFIGHHLTRRILETTSWEVYGMDMSSDRLGDLVD------HPRMHFFEGDITI 65
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 66 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 125
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D DP ++SP I+G I K RW YAC+KQL++R+I+A
Sbjct: 126 TSEVYG------MCADDEF--DP-------ESSPLIYGPINKPRWIYACSKQLMDRVIHA 170
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG+
Sbjct: 171 YGMEQGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGEQ 227
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
+R F I D I A++ +IENP A G IFN+GNP N +VR+LAEMM ++ A E
Sbjct: 228 KRAFADISDGISALMRIIENPNGIATGKIFNIGNPSNIHSVRELAEMMLKMAADYPEYAE 287
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
A + V+ SS +FYG+GY D R+P + Q+LGW P+ ++
Sbjct: 288 EARKTQIVETSSGDFYGKGYQDVQHRVPKIDNTMQELGWKPEVTM 332
>gi|300722790|ref|YP_003712081.1| formyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297629298|emb|CBJ89897.1| putative formyltransferase [Xenorhabdus nematophila ATCC 19061]
Length = 673
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 195/365 (53%), Gaps = 28/365 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLEDGNYDIYGMDIGSSAIERFI------GNPHFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + I N+GNP NE ++RQLAEM+ E + K + G
Sbjct: 534 KRCFTDIHDGIEALFRIIENRDGLCDSQIINIGNPTNEASIRQLAEMLLESFEKHELRGY 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
L + S +YG+GY D + R P + + LGW P + ++ TL + R
Sbjct: 594 FPLFSGFKKIESSSYYGQGYQDVEHRKPSIKNAERLLGWKPTIDMKQTIDETLDFFLRGA 653
Query: 376 AEAIK 380
E +K
Sbjct: 654 VEELK 658
>gi|194292197|ref|YP_002008104.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
taiwanensis LMG 19424]
gi|193226101|emb|CAQ72048.1| putative UDP-glucuronic acid decarboxylase (UDP-GlcUA
decarboxylase) [Cupriavidus taiwanensis LMG 19424]
Length = 350
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 196/346 (56%), Gaps = 30/346 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL T ++ +D+ D++ L+E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLTRRILETTSWEVYGMDMNTDRLGDLVE------HPRMHFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG S DP DASP ++G I K RW YAC+KQL++R+I+A
Sbjct: 118 TSEVYGMC--------SDEEFDP-------DASPLVYGPINKPRWIYACSKQLMDRVIHA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 163 YGMEQGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEV---YAKVSG 314
QR F I D I A++ +IENP A+G I+N+GNP N +VR+LAEMM ++ Y + +
Sbjct: 220 QRAFADIADGISALMRIIENPGGVASGKIYNIGNPGNIHSVRELAEMMLKMAADYPEYAQ 279
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
+A L + V+ SS +FYG+GY D R+P + ++LGW P+ +
Sbjct: 280 QARLTK-IVETSSGDFYGKGYQDVQHRVPKIDNTIEELGWRPEIGM 324
>gi|50122067|ref|YP_051234.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pectobacterium atrosepticum SCRI1043]
gi|81644376|sp|Q6D2F1.1|ARNA_ERWCT RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|49612593|emb|CAG76043.1| probable formyl transferase [Pectobacterium atrosepticum SCRI1043]
Length = 673
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/359 (36%), Positives = 190/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 325 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISI 378
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ S
Sbjct: 379 HNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPS 438
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 439 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 483
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 484 YGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 540
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L EM+ + +
Sbjct: 541 KRCFTDIHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDR 600
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+DV S +YG+GY D R P + + L W P + + TL Y RT
Sbjct: 601 FPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 659
>gi|268592579|ref|ZP_06126800.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Providencia rettgeri DSM 1131]
gi|291311993|gb|EFE52446.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Providencia rettgeri DSM 1131]
Length = 661
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 194/355 (54%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L VV+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKVVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDESRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F IKD IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ E + K G+
Sbjct: 534 KRCFTDIKDGIEALFRIIENKDGKCDGQIINIGNPTNEASIRELAEMLLESFEKHPQRGK 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++ S +YG+GY D + R P + + L W P + D +E TL +
Sbjct: 594 FPPFAGFREIESSSYYGQGYQDVEHRKPSVENARRLLDWVPTIDMKDTIEETLDF 648
>gi|113867439|ref|YP_725928.1| NAD-dependent epimerase/dehydratase family protein [Ralstonia
eutropha H16]
gi|113526215|emb|CAJ92560.1| dTDP-glucose 4-6-dehydratase [Ralstonia eutropha H16]
Length = 351
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 202/367 (55%), Gaps = 32/367 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL TP ++ +D+ +D++ L++ R+ F +I
Sbjct: 6 VLILGVNGFIGHHLTRRILETTPWEVYGMDMSSDRLGDLVD------HPRMHFFEGDITI 59
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 60 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 119
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG S DP +ASP ++G I K RW YAC+KQL++R+I+A
Sbjct: 120 TSEVYGMC--------SDEEFDP-------EASPLVYGPINKPRWIYACSKQLMDRVIHA 164
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 165 YGMEQGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 221
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
QR F I D I+A++ +I NP A+G I+N+GNP N +VR+LAEMM ++ A E
Sbjct: 222 QRAFADIADGIDALMRIIANPNGVASGKIYNIGNPGNIHSVRELAEMMLKMAADYPEYAE 281
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
A + ++ SS +FYG+GY D R+P + +LGW P+ +E++L Y
Sbjct: 282 EARKTQIIETSSGDFYGKGYQDVQHRVPKIGNTVDELGWEPRIG----MEASLRRIFEAY 337
Query: 376 AEAIKQA 382
+ +A
Sbjct: 338 RTHVTEA 344
>gi|409405895|ref|ZP_11254357.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum sp. GW103]
gi|386434444|gb|EIJ47269.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum sp. GW103]
Length = 351
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 200/364 (54%), Gaps = 26/364 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ D+I +LE E+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKS--RMHFFEGDITI 61
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y PL +F LP+V+ ++ K L+ S
Sbjct: 62 NQEWVEYHVKKCDVILPLVAIATPSTYVNAPLRVFELDFEANLPIVRSAAKYKKHLVFPS 121
Query: 139 TCEVYGKTIGS-FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG F P++S L I G I K RW Y+CAKQL++R+I+
Sbjct: 122 TSEVYGMCHDEEFDPEESEL----------------ICGPINKPRWIYSCAKQLMDRVIW 165
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E+GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGGQ
Sbjct: 166 GYGMESGLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQ 222
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV--SG 314
+R F YI D I+A++ +I N A+G I+N+GNP N +++ LA+MM ++ A+
Sbjct: 223 QKRAFTYIDDGIDALMKIIANEGGVASGKIYNIGNPTNNYSIKDLADMMLKLAAEYPEYA 282
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
E A + V+ +S +YG+GY D R+P +T ++L W PKT++ D L +
Sbjct: 283 ETAKQVQLVETTSAAYYGKGYQDVQNRVPKITNTCEELNWAPKTTMADTLRNIFDAYRSQ 342
Query: 375 YAEA 378
A+A
Sbjct: 343 VAQA 346
>gi|421080277|ref|ZP_15541211.1| Polymyxin resistance protein ArnA [Pectobacterium wasabiae CFBP
3304]
gi|401705130|gb|EJS95319.1| Polymyxin resistance protein ArnA [Pectobacterium wasabiae CFBP
3304]
Length = 672
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 324 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFLDDP------RFHFVEGDISI 377
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ S
Sbjct: 378 HNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPS 437
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 438 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 482
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+
Sbjct: 483 YGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQ 539
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L +M+ + +
Sbjct: 540 KRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDR 599
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+DV S +YG+GY D R P + + L W P ++ + TL Y RT
Sbjct: 600 FPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPMVTMEQTIAETLDYFLRT 658
>gi|328954480|ref|YP_004371814.1| NAD-dependent epimerase/dehydratase [Desulfobacca acetoxidans DSM
11109]
gi|328454804|gb|AEB10633.1| NAD-dependent epimerase/dehydratase [Desulfobacca acetoxidans DSM
11109]
Length = 355
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 202/375 (53%), Gaps = 46/375 (12%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH--------LLEPESQTGADR 69
+ I ++G GFIG+ L +IL T + +D+YN+K+ H LE + +
Sbjct: 5 LKILILGVNGFIGNALVRRILNTTNWLVYGMDLYNNKLDHSLNHPRFNFLEGDIAINKEW 64
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
I++H IK D+ + L AI TP Y +PL +F + L VV+ C +
Sbjct: 65 IEYH-------------IKKCDVVLPLVAIATPMTYVKQPLRVFELDFEENLRVVRQCVK 111
Query: 130 NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
R+I ST EVYG P+ ED+S + G I K RW Y+C+K
Sbjct: 112 YGTRIIFPSTSEVYG-----MCPEAE----------FHEDSSTLVLGPINKPRWIYSCSK 156
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
QL++R+I+A G E L+FT+ RPFNWIGP++D I EG RV+ F NL+ R+P
Sbjct: 157 QLLDRVIWAYGQEGNLQFTLFRPFNWIGPKLD---DIYAAKEGSSRVVTQFIINLVNREP 213
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEV 308
++LVDGG+ +R F +++D I ++ +IENP A+G IFN+GNP NE +V++LA M+ ++
Sbjct: 214 IRLVDGGRQKRCFTFVEDGIGCLMKIIENPGGVADGKIFNIGNPDNEASVKELALMLLQM 273
Query: 309 YAKVSGEAALEE--PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ + E+ ++V +E+YG+GY D R P + + LGW P+T L L
Sbjct: 274 FKEHPEHCQDEDYAEIIEVPHEEYYGQGYQDIFTRKPSIANAREYLGWTPETDLATSLRI 333
Query: 367 TLTYQHRTYAEAIKQ 381
TL + E ++Q
Sbjct: 334 TLD----AFLEEVRQ 344
>gi|406938398|gb|EKD71640.1| hypothetical protein ACD_46C00139G0008 [uncultured bacterium]
Length = 337
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 195/358 (54%), Gaps = 29/358 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + ++GA GFIGSHL E IL + +I A+D+ DKI L R F +I
Sbjct: 1 MNVLILGANGFIGSHLSETILAQKDWQIYAMDLTQDKIGSCL------NHPRFHFTVGDI 54
Query: 78 -KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
K + I+ D+ + L A+ TPA Y PL +F L +V+ C+E NKR+I
Sbjct: 55 TKQKDWINEHIQKCDVVLPLVAVATPALYVQDPLRVFELDFEANLDIVRQCAEYNKRIIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D+ E+ S + G I K+RW Y+ +KQL++R+I
Sbjct: 115 PSTSEVYG------MCPDAEF---------DEEKSHLVTGPISKERWIYSTSKQLMDRVI 159
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
YA G L + + RPFNW GPR+D + P G RVL F N+LR + + LV+GG
Sbjct: 160 YAYGKHKNLSYALFRPFNWYGPRLD---NVMNPKPGGSRVLTQFIGNILRGENINLVNGG 216
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
QR F YI D I+A++ +IEN +A+ IFNVGNP +++RQLAE + E+ +
Sbjct: 217 AQQRCFTYISDGIDALIRIIENKNDQAHNRIFNVGNPDENISIRQLAETLIEMIKISYPK 276
Query: 316 AALEEPT---VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A++ VDV +K +YGEGY D R+P + + L WNP+ ++ D L+ TL +
Sbjct: 277 HAIKADAVKLVDVDAKNYYGEGYQDVSLRVPSIRHAKEYLSWNPEVNMKDGLKKTLDF 334
>gi|422014558|ref|ZP_16361168.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia burhodogranariea DSM
19968]
gi|414100778|gb|EKT62389.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia burhodogranariea DSM
19968]
Length = 660
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 192/355 (54%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYDIYGMDISSSAIDRFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L VV+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKVVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDESRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ L+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKENLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F IKD IEA+ +IEN + +G I N+GNP NE ++RQLAEM+ E + + G
Sbjct: 534 KRCFTDIKDGIEALFRIIENKDGKCDGQIINIGNPTNEASIRQLAEMLLESFENHPLRGN 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++ S +YG+GY D + R P + + L W P + D +E TL +
Sbjct: 594 FPPFAGFREIESSSYYGKGYQDVEHRKPSIENARRLLEWEPSIDMKDTIEETLDF 648
>gi|333926953|ref|YP_004500532.1| bifunctional polymyxin resistance protein ArnA [Serratia sp. AS12]
gi|333931907|ref|YP_004505485.1| bifunctional polymyxin resistance protein ArnA [Serratia plymuthica
AS9]
gi|386328776|ref|YP_006024946.1| Bifunctional polymyxin resistance protein ArnA [Serratia sp. AS13]
gi|333473514|gb|AEF45224.1| Bifunctional polymyxin resistance protein ArnA [Serratia plymuthica
AS9]
gi|333491013|gb|AEF50175.1| Bifunctional polymyxin resistance protein ArnA [Serratia sp. AS12]
gi|333961109|gb|AEG27882.1| Bifunctional polymyxin resistance protein ArnA [Serratia sp. AS13]
Length = 661
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 194/367 (52%), Gaps = 28/367 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ +D I L+ R F +I
Sbjct: 319 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFLDNP------RFHFVEGDISI 372
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 373 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 432
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 433 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 477
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 478 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 534
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + +
Sbjct: 535 KRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDS 594
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
DV S +YG+GY D + R P + + LGW P ++ + TL Y RT
Sbjct: 595 FPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLGWQPTIAMQQTVADTLDYFLRTT 654
Query: 376 AEAIKQA 382
+ K A
Sbjct: 655 VQEGKGA 661
>gi|406979618|gb|EKE01368.1| hypothetical protein ACD_21C00150G0004 [uncultured bacterium]
Length = 337
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/356 (37%), Positives = 197/356 (55%), Gaps = 28/356 (7%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
T+ ++G GFIG+ L +KIL +T ++ +D+ +K++H L+ R+ F + +I
Sbjct: 3 TVLILGINGFIGNQLTKKILADTDWEVYGMDLAANKLEHSLD------NPRLHFTKGDIT 56
Query: 79 HDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ + IK D+ + L AI TPA Y T PL +F LP V+ C + K L+
Sbjct: 57 TNQEWITDHIKKCDVILPLVAIATPATYVTDPLRVFELDFEANLPTVRQCVQFKKHLVFP 116
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EVYG SP + E+ SP + G I K+RW Y+C+KQL++R+IY
Sbjct: 117 STSEVYGM---------SPDAE------FDEETSPLMQGPINKERWIYSCSKQLMDRIIY 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + L+FT+ RPFNWIGP D I + P GV R++ +N+ + +LVDGG+
Sbjct: 162 AYGNHSDLKFTLFRPFNWIGPTQDDIHNL--PKGGV-RLITQLISNIFYGKDFQLVDGGE 218
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+R+F YI DAIEA++ +I+N R G I N+GNP N ++R++AE + E+ K
Sbjct: 219 QKRSFTYIDDAIEALVKVIDNKDRCVEGKIINIGNPKNNASIREVAEKILELAKKYPKYQ 278
Query: 317 ALEE--PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A E V+ S +YG GY D R+P + + LGW PKT L LE T+ Y
Sbjct: 279 AQVEKIKIVNTQSNTYYGSGYQDVQNRVPSIKRAREILGWEPKTDLEAALEKTMDY 334
>gi|242241410|ref|YP_002989591.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Dickeya dadantii Ech703]
gi|242133467|gb|ACS87769.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech703]
Length = 660
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/363 (36%), Positives = 193/363 (53%), Gaps = 28/363 (7%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
+P + ++G GFIG+HL E++L E ++I LD+ +D I L G R F
Sbjct: 314 RPTRVLILGVNGFIGNHLTERLLSEDNYEIFGLDISSDAISRFL------GNPRFHFVEG 367
Query: 76 NIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+
Sbjct: 368 DISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRI 427
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
I ST EVYG + DP + ED S I G I K RW Y+ +KQL++R
Sbjct: 428 IFPSTSEVYG------------MCTDPMF---DEDRSNLIVGPINKPRWIYSVSKQLLDR 472
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVD
Sbjct: 473 VIWAYGEKEGLSFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVD 529
Query: 255 GGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK-- 311
GG+ +R F IKD +EA+ +IEN +G I N+GNP NE ++RQLAEM+ E + K
Sbjct: 530 GGRQKRCFTDIKDGVEALFRIIENRDGVCDGQIINIGNPDNEASIRQLAEMLLESFEKHP 589
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+ + DV S +YG+GY D + R P + + L W P + + TL +
Sbjct: 590 LRHQFPPFAGFRDVESSSYYGKGYQDVEHRKPSIRNAKRLLHWQPTIEMEKTVAETLDFF 649
Query: 372 HRT 374
+T
Sbjct: 650 LKT 652
>gi|451964450|ref|ZP_21917715.1| UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic
acid oxidase [Edwardsiella tarda NBRC 105688]
gi|451316823|dbj|GAC63077.1| UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic
acid oxidase [Edwardsiella tarda NBRC 105688]
Length = 659
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 201/381 (52%), Gaps = 36/381 (9%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA + L+ + + ++G GFIG+HL E++L E +++ LD+ +D I +
Sbjct: 301 GAILNSSLNFGARRATRVLILGVNGFIGNHLTERLLAEENYEVYGLDIGSDAISRFI--- 357
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
G R F +I H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 358 ---GHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 414
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+ C + KR+I ST EVYG + DP + ED S I G I KQ
Sbjct: 415 KIVRDCVKYQKRIIFPSTSEVYG------------MCSDPQF---DEDHSNLIVGPINKQ 459
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A GA++GL FT+ RPFNW+GPR+D ++ G R +
Sbjct: 460 RWIYSVSKQLLDRIIWAYGAKDGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLI 516
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQ 300
NL+ P+KLVDGG+ +R F IK+ +EA+ +IEN R +G I N+GNP NE ++R+
Sbjct: 517 LNLVEGSPIKLVDGGRQKRCFTDIKEGVEALFRIIENKDNRCDGQIINIGNPDNEASIRE 576
Query: 301 LAEMMTEVYA------KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
LAE + + + A E V S +YG+GY D + R P + + LGW
Sbjct: 577 LAEQLLVCFEQHPLRDRFPPFAGFRE----VESSTYYGKGYQDVEHRKPSIRNAQRLLGW 632
Query: 355 NPKTSLWDLLESTLTYQHRTY 375
P + +E TL + RT+
Sbjct: 633 QPVIPMEQTIEDTLDFFLRTF 653
>gi|294635680|ref|ZP_06714152.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase, partial
[Edwardsiella tarda ATCC 23685]
gi|291090961|gb|EFE23522.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Edwardsiella tarda ATCC 23685]
Length = 504
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 202/383 (52%), Gaps = 36/383 (9%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
+ GA + L+ + + ++G GFIG+HL E++L E +++ LD+ +D I +
Sbjct: 144 VEGAILNSSLNFGARRATRVLILGVNGFIGNHLTERLLAEENYEVYGLDIGSDAISRFI- 202
Query: 61 PESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFID 119
G R F +I H +E IK D+ + L AI TP +Y PL +F +
Sbjct: 203 -----GHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 257
Query: 120 ALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE 179
L +V+ C + KR+I ST EVYG + DP + ED S I G I
Sbjct: 258 NLKIVRDCVKYQKRIIFPSTSEVYG------------MCSDPQF---DEDHSNLIVGPIN 302
Query: 180 KQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
KQRW Y+ +KQL++R+I+A GA++GL FT+ RPFNW+GPR+D ++ G R +
Sbjct: 303 KQRWIYSVSKQLLDRIIWAYGAKDGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQ 359
Query: 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTV 298
NL+ P+KLVDGG+ +R F IK+ +EA+ +IEN R +G I N+GNP NE ++
Sbjct: 360 LILNLVEGSPIKLVDGGRQKRCFTDIKEGVEALFRIIENKDNRCDGQIINIGNPDNEASI 419
Query: 299 RQLAEMMTEVYA------KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL 352
R+LAE + + + A E V S +YG+GY D + R P + + L
Sbjct: 420 RELAEQLLVCFEQHPLRDRFPPFAGFRE----VESSTYYGKGYQDVEHRKPSIRNAQRLL 475
Query: 353 GWNPKTSLWDLLESTLTYQHRTY 375
GW P + +E TL + RT+
Sbjct: 476 GWQPVIPMEQTIEDTLDFFLRTF 498
>gi|312796142|ref|YP_004029064.1| UDP-glucuronate 4-dehydrogenase (decarboxylating) [Burkholderia
rhizoxinica HKI 454]
gi|312167917|emb|CBW74920.1| UDP-glucuronate 4-dehydrogenase (decarboxylating) (EC 1.1.1.-)
[Burkholderia rhizoxinica HKI 454]
Length = 371
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/364 (37%), Positives = 193/364 (53%), Gaps = 31/364 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D++ D++ L T R+ F +I
Sbjct: 29 VLILGVNGFIGHHLSKRILETTDWEVYGMDMHKDRLGGL------TQHPRMHFFEGDITI 82
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E ++ D + L AI TPA Y +PL +F +P+V+ + K L+ S
Sbjct: 83 NKEWVEYHVRKCDAILPLVAIATPATYVKQPLRVFELDFEANVPIVRSAVKYGKHLVFPS 142
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T G F P +ASP I+G I K RW YAC+KQL++R+I+
Sbjct: 143 TSEVYGMCTDGEFDP----------------EASPLIYGPINKPRWIYACSKQLMDRVIW 186
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 187 GYGME-GLNFTLFRPFNWIGPGLD---TIHTPKEGSSRVVTQFLGHIVRGENISLVDGGA 242
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IENPA A G I+N+GNPHN +VR+LA M + A
Sbjct: 243 QKRAFTDIDDGISALMRIIENPAGIATGKIYNIGNPHNNFSVRELANKMLALAADYPEYA 302
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
++A + V+ SS +YG GY D R+P + Q L W P S+ D L
Sbjct: 303 QSAQQVKLVETSSSAYYGTGYQDVQNRVPKIDNTKQDLAWAPTLSMDDALRKIFEAYRSQ 362
Query: 375 YAEA 378
AEA
Sbjct: 363 VAEA 366
>gi|312879139|ref|ZP_07738939.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
gi|310782430|gb|EFQ22828.1| NAD-dependent epimerase/dehydratase [Aminomonas paucivorans DSM
12260]
Length = 336
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 134/355 (37%), Positives = 190/355 (53%), Gaps = 26/355 (7%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + ++GA GFIGS LCEKIL ET + ALD + + L G R F + +
Sbjct: 1 MNVLILGANGFIGSFLCEKILAETDWTVTALDPGDSNLGACL------GNPRFSFRKDTM 54
Query: 78 KHD-SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ ++ ++ AD + LA I PA Y PL +F + L VV+ C+E R++
Sbjct: 55 GNSWDWIDREVEAADAVVPLAGIARPAVYIENPLLIFELDFEENLRVVRRCAETRTRVVF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + P + L ED S + G I K RW Y+C+KQ+++R+I
Sbjct: 115 PSTSEVYGMS-----PDEE----------LDEDHSILVQGPIGKSRWIYSCSKQMMDRVI 159
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
A GA+ GL +T+ RPFNWIGPR D +G R++ NLLRR+PL LVDGG
Sbjct: 160 AALGAQKGLPYTLFRPFNWIGPRQDDPLRPEGNDN---RLVPQLLGNLLRRRPLVLVDGG 216
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG-E 315
+R+F I D IE +L ++ P ANG IFN+GNP N ++R++AE++ EV A G E
Sbjct: 217 AQRRSFTDIDDGIEGLLAILRQPEAANGQIFNLGNPRNNHSIREVAELLREVLAAQPGQE 276
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P +V + E+YG GY D R P + + LGW L LE T+ +
Sbjct: 277 DTASVPLTEVPATEYYGTGYQDVRDRRPSVRKAKELLGWEATRPLRQTLERTVHF 331
>gi|421783230|ref|ZP_16219681.1| bifunctional polymyxin resistance protein ArnA [Serratia plymuthica
A30]
gi|407754670|gb|EKF64802.1| bifunctional polymyxin resistance protein ArnA [Serratia plymuthica
A30]
Length = 660
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 193/365 (52%), Gaps = 28/365 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + +
Sbjct: 534 KRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDS 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
DV S +YG+GY D + R P + + LGW P ++ + TL Y RT
Sbjct: 594 FPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLGWQPTIAMQQTVADTLDYFLRTT 653
Query: 376 AEAIK 380
+ K
Sbjct: 654 VQEGK 658
>gi|270261570|ref|ZP_06189843.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia odorifera 4Rx13]
gi|270045054|gb|EFA18145.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia odorifera 4Rx13]
Length = 661
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 133/365 (36%), Positives = 193/365 (52%), Gaps = 28/365 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ +D I L+ R F +I
Sbjct: 319 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFLDNP------RFHFVEGDISI 372
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 373 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 432
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 433 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 477
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 478 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 534
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + +
Sbjct: 535 KRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDS 594
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
DV S +YG+GY D + R P + + LGW P ++ + TL Y RT
Sbjct: 595 FPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLGWQPTIAMQQTVADTLDYFLRTT 654
Query: 376 AEAIK 380
+ K
Sbjct: 655 VQEGK 659
>gi|271502704|ref|YP_003335730.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech586]
gi|270346259|gb|ACZ79024.1| NAD-dependent epimerase/dehydratase [Dickeya dadantii Ech586]
Length = 663
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 130/355 (36%), Positives = 190/355 (53%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I+ L G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVFGLDISSDAIERFL------GNPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L ++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKTIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + DP V ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDP---VFDEDNSNLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F IKD IEA+ +IEN +G I N+GNP NE ++RQLAEM+ E + K + +
Sbjct: 534 KRCFTDIKDGIEALFRIIENKDGVCDGQIINIGNPENEASIRQLAEMLLESFEKHPLRNQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+V S +YG+GY D + R P + + L W P + + TL +
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLHWQPTIEMEKTVAETLDF 648
>gi|94313514|ref|YP_586723.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
metallidurans CH34]
gi|93357366|gb|ABF11454.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 350
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 193/345 (55%), Gaps = 28/345 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL T ++ +D+ +D++ L+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLTRRILETTQWEVYGMDMSSDRLGDLVN------HPRMHFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWIEYNIRKCDVVLPLVAIATPATYVREPLRVFELDFEANLPIVRAAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D DP +ASP I+G I K RW YAC+KQL++R+I+A
Sbjct: 118 TSEVYG------MCADEEF--DP-------EASPLIYGPINKPRWIYACSKQLMDRVIHA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 163 YGMQEGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
QR F I D I A++ +IEN ANG IFN+GNP N +VR+LAEMM ++ A+ E
Sbjct: 220 QRAFADISDGISALMRIIENKDGVANGKIFNIGNPGNIHSVRELAEMMLKMAAEYPEYAE 279
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
A + V+ SS +FYG+GY D R+P + +LGW P+ S+
Sbjct: 280 EARKTKIVETSSGDFYGKGYQDVQHRVPKIDNTIGELGWKPEVSM 324
>gi|388545595|ref|ZP_10148876.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas sp. M47T1]
gi|388276280|gb|EIK95861.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas sp. M47T1]
Length = 663
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 197/363 (54%), Gaps = 29/363 (7%)
Query: 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ 71
GRP++ + ++G GFIG+HL E++L + ++I LD+ +D I+HL G R
Sbjct: 313 GRPVRRTRVLILGVNGFIGNHLSERLLRDDRYEIYGLDIGSDAIEHL------RGNPRFH 366
Query: 72 FHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
F +I H +E IK D+ + L AI TP +Y PL +F + L +V++C +
Sbjct: 367 FVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRHCVKY 426
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
NKR+I ST EVYG + QD + E+ S I G I KQRW Y+ +KQ
Sbjct: 427 NKRVIFPSTSEVYG------------MCQDSHF---DENTSNLIVGPINKQRWIYSVSKQ 471
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
L++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L+ P+
Sbjct: 472 LLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPI 527
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
+LVDGG+ +RTF + D IEA+ +IEN + +G I N+GNP NE ++RQL E + +
Sbjct: 528 RLVDGGEQKRTFTDVDDGIEALARIIENRDGKCDGEIINIGNPTNEASIRQLGEELLRQF 587
Query: 310 AK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+ G ++ SK FYG GY D R P + + + W P L + + T
Sbjct: 588 EAHPLRGNFPPFAGFREIESKAFYGNGYQDVTHRTPSIENARRLIDWTPTIELSETIGKT 647
Query: 368 LTY 370
L +
Sbjct: 648 LDF 650
>gi|253689295|ref|YP_003018485.1| NAD-dependent epimerase/dehydratase [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259563492|sp|C6DAW5.1|ARNA_PECCP RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|251755873|gb|ACT13949.1| NAD-dependent epimerase/dehydratase [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 672
Score = 223 bits (569), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 130/359 (36%), Positives = 190/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 324 VLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFL------GDPRFHFVEGDISI 377
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H+ +E IK D+ + L AI TP +Y PL +F + L +V+ C NKR++ S
Sbjct: 378 HNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPS 437
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 438 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 482
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 483 YGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 539
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L +M+ + +
Sbjct: 540 KRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDR 599
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
++V S +YG+GY D R P + + L W P + + TL Y RT
Sbjct: 600 FPPFAGFIEVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 658
>gi|421748629|ref|ZP_16186201.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
necator HPC(L)]
gi|409772629|gb|EKN54595.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
necator HPC(L)]
Length = 350
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 194/363 (53%), Gaps = 28/363 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL T ++ +D+ ++ L+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLTRRILETTSWEVYGMDMSTARLGELVN------HPRMHFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWIEYNIRKCDAVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYRKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D A+ ++SP ++G I K RW YAC+KQL++R+I+A
Sbjct: 118 TSEVYG------------MCGDEAF---DPESSPLVYGPINKPRWIYACSKQLMDRVIHA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIGP +D I EG RV+ F +++R +P++LVDGG
Sbjct: 163 YGIEQGLNYTLFRPFNWIGPGLD---SIFESKEGSSRVVTQFLGHIVRGEPIRLVDGGAQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
QR F I D I A++ +IENP A+G IFN+GNP N +VR+LAEMM + A E
Sbjct: 220 QRAFADISDGISALMRIIENPGGIASGKIFNIGNPGNVHSVRELAEMMLRMAADYPEYAE 279
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+A ++ SS EFYG GY D R+P + ++LGW P ++ + L
Sbjct: 280 SARHSRILETSSGEFYGNGYQDVQHRVPKIDNTMRELGWQPTVTMAESLRRIFEAYREKV 339
Query: 376 AEA 378
EA
Sbjct: 340 IEA 342
>gi|386824791|ref|ZP_10111920.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia plymuthica PRI-2C]
gi|386378236|gb|EIJ19044.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia plymuthica PRI-2C]
Length = 660
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 195/369 (52%), Gaps = 36/369 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E +
Sbjct: 534 KRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESF----NHHP 589
Query: 318 LEE---PTV---DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
L E P DV S +YG+GY D + R P + + LGW P ++ + TL Y
Sbjct: 590 LRERFPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLGWQPTIAMQQTVADTLDYF 649
Query: 372 HRTYAEAIK 380
RT + K
Sbjct: 650 LRTTVQEGK 658
>gi|422008396|ref|ZP_16355380.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia rettgeri Dmel1]
gi|414094869|gb|EKT56532.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Providencia rettgeri Dmel1]
Length = 661
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 129/362 (35%), Positives = 194/362 (53%), Gaps = 42/362 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L + + I +D+ + I+ H +E + + I+
Sbjct: 318 VLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSAIERFIGNPCFHFIEGDVSIHTEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H IK D+ + L AI TP +Y PL +F + L VV+YC + N
Sbjct: 378 YH-------------IKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKVVRYCVKYN 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + D + ED S I G I KQRW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYG------------MCDDKEF---DEDESRLIVGPINKQRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGAKEGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
LVDGG +R F IKD IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ E +
Sbjct: 527 LVDGGAQKRCFTDIKDGIEALFRIIENKDGKCDGQIINIGNPTNEASIRELAEMLLESFE 586
Query: 311 K--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
K G+ ++ S +YG+GY D + R P + + L W P + D +E TL
Sbjct: 587 KHPQRGKFPPFAGFREIESSSYYGQGYQDVEHRKPSVENARRLLDWVPTIDMKDTIEETL 646
Query: 369 TY 370
+
Sbjct: 647 DF 648
>gi|94313749|ref|YP_586958.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
metallidurans CH34]
gi|93357601|gb|ABF11689.1| UDP-glucuronate decarboxylase U [Cupriavidus metallidurans CH34]
Length = 352
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 133/345 (38%), Positives = 193/345 (55%), Gaps = 28/345 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL T ++ +D+ +D++ L+ R+ F +I
Sbjct: 6 VLILGINGFIGHHLTRRILETTQWEVYGMDMSSDRLGDLVN------HPRMHFFEGDITI 59
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y PL +F LP+V+ + K L+ S
Sbjct: 60 NKEWIEYNIRKCDVVLPLVAIATPATYVREPLRVFELDFEANLPIVRAAVKYGKHLVFPS 119
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D DP +ASP I+G I K RW YAC+KQL++R+I+A
Sbjct: 120 TSEVYG------MCADEEF--DP-------EASPLIYGPINKPRWIYACSKQLMDRVIHA 164
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 165 YGMQEGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 221
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
QR F I D I A++ +IEN ANG IFN+GNP N +VR+LAEMM ++ A+ E
Sbjct: 222 QRAFADISDGISALMRIIENKDGVANGKIFNIGNPGNIHSVRELAEMMLKMAAEYPEYAE 281
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
A + V+ SS +FYG+GY D R+P + +LGW P+ S+
Sbjct: 282 EARKTKIVETSSGDFYGKGYQDVQHRVPKIDNTIGELGWKPEVSM 326
>gi|290475536|ref|YP_003468424.1| formyltransferase [Xenorhabdus bovienii SS-2004]
gi|289174857|emb|CBJ81658.1| putative formyltransferase [Xenorhabdus bovienii SS-2004]
Length = 661
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 191/355 (53%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLDDEKYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGVKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE ++RQLAEM+ E + K + G
Sbjct: 534 KRCFTDINDGIEALFRIIENRDGLCDGQIINIGNPTNEASIRQLAEMLLESFEKHELRGN 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ S +YG+GY D + R P + + LGW P + ++ TL +
Sbjct: 594 FPPFAGFKKIESSSYYGQGYQDVEHRKPSIKNAERLLGWKPTIDMKQTIDETLDF 648
>gi|149191240|ref|ZP_01869496.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Vibrio shilonii AK1]
gi|148834910|gb|EDL51891.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Vibrio shilonii AK1]
Length = 660
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 197/363 (54%), Gaps = 44/363 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK-HLLEPESQTGADRIQFHRLNIK 78
+ ++GA GFIG+HL +++L + +++ A+D+ +++I+ HL P+ I H
Sbjct: 320 VLILGANGFIGTHLTKRLLDDGGYEVYAMDMNSNQIEEHLSHPDFHFVEGDITIH----- 374
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 375 -NEWIEYHVKKCDIILPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYNKRIIFPS 433
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + DP + ED SP I G I +QRW Y+ +KQL++R+I+A
Sbjct: 434 TSEVYG------------MSTDPEF---NEDTSPLIVGPINRQRWIYSVSKQLLDRVIWA 478
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G ++GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 479 YGKKDGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGTPIKLIDGGEQ 535
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I +AIEA+ +IEN +G I N+G P NE ++++LAE + E +
Sbjct: 536 KRCFTDISEAIEALFRIIENKEGLCDGQIINIGAPENEASIKELAETLVEKFEN------ 589
Query: 318 LEEPTVD----------VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
P D V SK FYG+GY D R P + + L W PK + D +E T
Sbjct: 590 --HPLRDQFPPFAGYNLVESKAFYGDGYQDVQHRKPSIANAKKLLDWEPKVHMNDTIEET 647
Query: 368 LTY 370
L +
Sbjct: 648 LDF 650
>gi|453065575|gb|EMF06536.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia marcescens VGH107]
Length = 660
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 192/362 (53%), Gaps = 28/362 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + +
Sbjct: 534 KRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNRPLRDR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
DV S +YG+GY D + R P + ++ LGW P + + TL Y RT
Sbjct: 594 FPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNAHRLLGWQPTIEMKQTVADTLDYFLRTT 653
Query: 376 AE 377
+
Sbjct: 654 VQ 655
>gi|171463211|ref|YP_001797324.1| NAD-dependent epimerase/dehydratase family protein
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171192749|gb|ACB43710.1| NAD-dependent epimerase/dehydratase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 348
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 134/371 (36%), Positives = 203/371 (54%), Gaps = 41/371 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ ND++ L+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWDVYGMDMQNDRLGDLIN------HPRMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHIRKCDVILPLVAIATPATYVQQPLKVFELDFEANLPIVRSAVKYKKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + +DS DPA S I+G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYG------MCEDSEF--DPA-------KSNMIYGPINKPRWIYACSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + +VDGG
Sbjct: 163 YGME-GLRFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGESINVVDGGAQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV------YAK 311
+R F Y+ D I+A++ +I+N AN I+N+GNP+N ++R+LA M E+ YAK
Sbjct: 219 KRAFTYVDDGIDALMRIIDNKDGVANNKIYNIGNPNNNHSIRELANQMLEIARSIPEYAK 278
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+ E + V+ +S +YGEGY D R+P + QLGW P T++ D L++
Sbjct: 279 TANEVKI----VETTSGAYYGEGYQDVQNRVPAIDNTMSQLGWKPTTTMSDALKNIF--- 331
Query: 372 HRTYAEAIKQA 382
Y E +++A
Sbjct: 332 -EAYREDVEKA 341
>gi|145588618|ref|YP_001155215.1| NAD-dependent epimerase/dehydratase family protein
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047024|gb|ABP33651.1| NAD-dependent epimerase/dehydratase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 348
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 136/374 (36%), Positives = 203/374 (54%), Gaps = 45/374 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ ND++ L+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTSWDVYGMDMQNDRLGDLIN------HPRMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHIRKCDVILPLVAIATPATYVQQPLKVFELDFEANLPIVRSAVKYKKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + +DS DP+ S ++G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYG------MCEDSEF--DPS-------KSNMVYGPINKPRWIYACSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R +P+ LVDGG
Sbjct: 163 YGME-GLRFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGEPINLVDGGAQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV------YAK 311
+R F YI D I+A++ +I N ANG I+N+GNP N +VR+LA M ++ YAK
Sbjct: 219 KRAFTYIDDGIDALMHIIANKDGIANGKIYNIGNPKNNHSVRELANQMLDIARSIPEYAK 278
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+ + + V+ +S +YGEGY D R+P + +LGW P T++ D L++
Sbjct: 279 TANDVKI----VETTSGAYYGEGYQDVQNRVPAIDNTMSELGWKPTTTMADALKNIF--- 331
Query: 372 HRTYAEAIKQAVAK 385
EA +Q V K
Sbjct: 332 -----EAYRQDVDK 340
>gi|448241952|ref|YP_007406005.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia marcescens WW4]
gi|445212316|gb|AGE17986.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia marcescens WW4]
Length = 661
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 192/362 (53%), Gaps = 28/362 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ +D I L+ R F +I
Sbjct: 319 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFLDNP------RFHFVEGDISI 372
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 373 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 432
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 433 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 477
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 478 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 534
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + +
Sbjct: 535 KRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDR 594
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
DV S +YG+GY D + R P + ++ LGW P + + TL Y RT
Sbjct: 595 FPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNAHRLLGWQPTIEMKQTVADTLDYFLRTT 654
Query: 376 AE 377
+
Sbjct: 655 VQ 656
>gi|261820658|ref|YP_003258764.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pectobacterium wasabiae WPP163]
gi|261604671|gb|ACX87157.1| NAD-dependent epimerase/dehydratase [Pectobacterium wasabiae
WPP163]
Length = 673
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 196/371 (52%), Gaps = 29/371 (7%)
Query: 9 DLDGRPIKPVT-ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGA 67
+LD R + T + ++G GFIG+HL E++L + ++I LD+ +D I L+
Sbjct: 313 NLDSRVQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFLDDP----- 367
Query: 68 DRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
R F +I H+ +E IK D+ + L AI TP +Y PL +F + L +V+
Sbjct: 368 -RFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRD 426
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C NKR++ ST EVYG + D + ED S I G I KQRW Y+
Sbjct: 427 CVRYNKRIVFPSTSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYS 471
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
+KQL++R+I+A GA+N L FT+ RPFNW+GPR+D +D G R + NL+
Sbjct: 472 VSKQLLDRVIWAYGAKNNLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVE 528
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMM 305
P+KLVDGG+ +R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L +M+
Sbjct: 529 GSPIKLVDGGEQKRCFTDIHDGIEALFRIIENRNGQCDGRIINIGNPHNEASIRELGDML 588
Query: 306 TEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
+ + +DV S +YG+GY D R P + + L W P +
Sbjct: 589 LTSFNAHPLRDRFPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQT 648
Query: 364 LESTLTYQHRT 374
+ TL Y RT
Sbjct: 649 VAETLDYFLRT 659
>gi|167562495|ref|ZP_02355411.1| hypothetical protein BoklE_08024 [Burkholderia oklahomensis EO147]
gi|167569676|ref|ZP_02362550.1| hypothetical protein BoklC_07538 [Burkholderia oklahomensis C6786]
Length = 351
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 195/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG + D DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYG------MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F Y+ D I A++ +IENP A G I+N+GNP+N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTYVDDGISALMKIIENPNGIATGKIYNIGNPNNNFSVRELANKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A V+ +S +YG GY D R+P + Q+LGW P+ + D L
Sbjct: 276 PEYADSAKHVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIF 333
>gi|34496202|ref|NP_900417.1| NAD-dependent epimerase/dehydratase [Chromobacterium violaceum ATCC
12472]
gi|34102056|gb|AAQ58423.1| probable transformylase [Chromobacterium violaceum ATCC 12472]
Length = 347
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 195/363 (53%), Gaps = 44/363 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG HL ++I+ T +I +D++ D++ H E + + I+
Sbjct: 4 VLILGVNGFIGHHLTKRIIETTDWEIYGMDMHADRVAEWKDHPRFHFFEGDITINKEWIE 63
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP+ Y PL +F LP+V+ C +
Sbjct: 64 YH-------------VKKCDVVLPLVAIATPSTYVNNPLRVFELDFEANLPIVRQCVKYK 110
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
K L+ ST EVYG + +D+ DP + S I+G I K RW YAC+KQL
Sbjct: 111 KHLVFPSTSEVYG------MSQDAEF--DP-------ENSQLIYGPINKPRWIYACSKQL 155
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A E GL +T+ RPFNWIG +D I+ P EG RV+ F +++R + +K
Sbjct: 156 MDRVIHAYAMEEGLNYTLFRPFNWIGGGLD---NINTPKEGSSRVITQFLGHIVRGETIK 212
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
LVDGG +R F Y+ D I A++ +IEN +A+G I+N+GNP N ++R+LA+MM ++ A
Sbjct: 213 LVDGGHQKRAFTYVDDGISALMKIIENKDGKASGQIYNIGNPANNYSIRELAQMMLDL-A 271
Query: 311 KVSGEAALEEPTVDV---SSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+V E L V V +S ++YG+GY D R+P + L W P ++ D L
Sbjct: 272 RVYPEYQLNADKVQVVETTSGQYYGKGYQDVQNRVPKIANTMADLDWKPGVTMADALRGI 331
Query: 368 LTY 370
Y
Sbjct: 332 YDY 334
>gi|418019344|ref|ZP_12658847.1| Methionyl-tRNA formyltransferase [Candidatus Regiella insecticola
R5.15]
gi|347605288|gb|EGY29751.1| Methionyl-tRNA formyltransferase [Candidatus Regiella insecticola
R5.15]
Length = 682
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 204/384 (53%), Gaps = 39/384 (10%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
KP + ++G GFIG+HL +++L E ++I LD+ +D I + R F
Sbjct: 314 KPTRVLILGVNGFIGNHLTKRLLSEDNYEIYGLDIGSDAISCFM------SHPRFHFVEG 367
Query: 76 NIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I H +E IK D+ L AI TP +Y PL +F + L +V+ C + KR+
Sbjct: 368 DISIHSEWIEYHIKKCDVVSPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYKKRI 427
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R
Sbjct: 428 VFPSTSEVYG------------MCDDKEF---NEDSSRLIVGPINKQRWIYSVSKQLLDR 472
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+I+A GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+D
Sbjct: 473 VIWAYGAKEGLKFTLFRPFNWMGPRLD---SLDAARIGSSRAITQLILNLVEGTPIKLID 529
Query: 255 GGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMT------E 307
GG+ +R F IKD IEA+ +IEN R +G I N+GNP +E ++R+LAEM+ E
Sbjct: 530 GGEQKRCFTDIKDGIEALFRIIENRDNRCDGQIINIGNPADEASIRELAEMLVKHFEQHE 589
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+Y + A ++ + S YGEGY D R P + + L W PK S+ + ++ T
Sbjct: 590 LYNRFPPFAGYKK----IESSSHYGEGYQDVVHRTPCIKNARRLLNWQPKISMEETIKET 645
Query: 368 LTYQHR---TYAEAIKQAVAKPVA 388
L + R ++ + K A P A
Sbjct: 646 LDFFLRSTLSHGDIAKSGEAIPTA 669
>gi|222054646|ref|YP_002537008.1| NAD-dependent epimerase/dehydratase family protein [Geobacter
daltonii FRC-32]
gi|221563935|gb|ACM19907.1| NAD-dependent epimerase/dehydratase [Geobacter daltonii FRC-32]
Length = 346
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 200/357 (56%), Gaps = 28/357 (7%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + ++G GFIG+ L +IL T ++ LD+ ++K++H G R F +I
Sbjct: 1 MKVLILGVNGFIGNALTRRILDTTEWEVFGLDMSDNKLEH------SIGHPRFHFLEGDI 54
Query: 78 KHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ +E IK D+ + L AI TP Y PL +F + L +++ C + KR+I
Sbjct: 55 TINKEWIEYNIKKCDVVLPLVAIATPVTYVKDPLRVFELDFEENLKIIRQCVKYGKRVIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG SP R+ E+ SP + G I K+RW Y+CAKQ+++R+I
Sbjct: 115 PSTSEVYGM---------SPDRE------FDEETSPLMLGPINKERWIYSCAKQMLDRVI 159
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
YA G +GL +T+ RPFNWIGP++D I EG RVL F N+L +P++LVDGG
Sbjct: 160 YAYGEHDGLRYTLFRPFNWIGPKLD---SISTAKEGSSRVLTQFLYNILAGEPIQLVDGG 216
Query: 257 QSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS-- 313
+R+F +I+D I+ ++ +IEN A IFN+GNP N+++V++LA + E+ +
Sbjct: 217 SQRRSFTFIEDGIDCLMRIIENRDGCAERGIFNIGNPGNDLSVKELAVKLREMVKEYPEY 276
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ A + ++V+S FYG+GY D R+P + +LGW P T++ L TL +
Sbjct: 277 RDRAEKCRIIEVTSDAFYGKGYQDMLTRVPSVKNAETRLGWKPVTAIDSALRKTLEF 333
>gi|167836343|ref|ZP_02463226.1| hypothetical protein Bpse38_07626 [Burkholderia thailandensis
MSMB43]
gi|424903854|ref|ZP_18327367.1| hypothetical protein A33K_15229 [Burkholderia thailandensis MSMB43]
gi|390931727|gb|EIP89128.1| hypothetical protein A33K_15229 [Burkholderia thailandensis MSMB43]
Length = 351
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 194/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG + D DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYG------MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F Y+ D I A++ +IENP A G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTYVDDGISALMKIIENPNGVATGKIYNIGNPDNNFSVRELANKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A V+ +S +YG GY D R+P + Q+LGW P+ + D L
Sbjct: 276 PEYADSAKRVQLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIF 333
>gi|422607401|ref|ZP_16679401.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Pseudomonas syringae pv.
mori str. 301020]
gi|330891043|gb|EGH23704.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. mori str.
301020]
Length = 649
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 195/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L + + I +D+ +D I+ H +E +
Sbjct: 300 RPARRTRVLILGVNGFIGNHLSERLLQDDRYDIYGMDIGSDAIERLRTKPNFHFIEGDIS 359
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 360 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 406
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ KED S I G I KQRW
Sbjct: 407 RYCVKYNKRVIFPSTSEVYG------------MCQDASF---KEDTSNLIVGPINKQRWI 451
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 452 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLDR---LDSARIGSSRAITQLILHL 507
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E
Sbjct: 508 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGE 567
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q +GW P L
Sbjct: 568 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDISHRKPSIDNARQLIGWTPGIELS 627
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 628 ETIGKTLDF 636
>gi|416974045|ref|ZP_11937423.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
sp. TJI49]
gi|325520497|gb|EGC99595.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
sp. TJI49]
Length = 351
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 196/354 (55%), Gaps = 29/354 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IENP A+G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIDDGISALMKIIENPNGVASGKIYNIGNPKNNFSVRELAHKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
++A + V+ +S +YG GY D R+P + Q+LGW P+++ D L
Sbjct: 276 PEYADSAKQVQLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQSTFDDAL 329
>gi|421474410|ref|ZP_15922450.1| RmlD substrate binding domain protein [Burkholderia multivorans
CF2]
gi|400232254|gb|EJO61887.1| RmlD substrate binding domain protein [Burkholderia multivorans
CF2]
Length = 351
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 200/368 (54%), Gaps = 29/368 (7%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IENP A+G I+N+GNP+N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIDDGISALMKIIENPNGVASGKIYNIGNPNNNFSVRELANKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++A + V+ +S +YG GY D R+P + Q+LGW P+++ D L
Sbjct: 276 PEYADSAKQVRLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQSTFDDALRKIFEA 335
Query: 371 QHRTYAEA 378
A+A
Sbjct: 336 YRGHVADA 343
>gi|389700748|ref|ZP_10185225.1| nucleoside-diphosphate-sugar epimerase [Leptothrix ochracea L12]
gi|388591180|gb|EIM31442.1| nucleoside-diphosphate-sugar epimerase [Leptothrix ochracea L12]
Length = 367
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 194/359 (54%), Gaps = 44/359 (12%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADR 69
+ + ++G GFIG HL +I+ T + +D+ +D++ H E + +
Sbjct: 22 LKVLILGVNGFIGHHLTRRIIETTDWHVYGMDMQSDRVTPWLNHPNFHFFEGDLTINKEW 81
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
I++H +K D+ + L AI TPA Y PL +F LPV++ C +
Sbjct: 82 IEYH-------------VKKCDVVLPLVAIATPATYVREPLRVFELDFEANLPVIRQCVK 128
Query: 130 NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
KRL+ ST EVYG + QD A+ D SP + G I K RW YA AK
Sbjct: 129 YKKRLVFPSTSEVYG------------MCQDEAF---DPDTSPLVCGPINKPRWIYASAK 173
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
QL++R+I+A G + GL +T+ RPFNWIGP +D + EG RV+ F +L+R +P
Sbjct: 174 QLMDRVIHAYGQQEGLNYTLFRPFNWIGPGLD---SLHTAKEGSSRVITQFLGHLVRGEP 230
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEV 308
++LVDGG QR F YI D I+A++ ++ NP +A I+N+G+P N +VR+LAEMM +
Sbjct: 231 IRLVDGGGQQRCFTYIDDGIDALMTILHNPENKAAAQIYNIGHPGNNYSVRELAEMMLAL 290
Query: 309 YAKVSGEAALEEPTV---DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
A+ E ++ V D++S ++YG+GY D +R+P + L W PK S+ + L
Sbjct: 291 AAQ-RPEYQIQASRVALIDIASGDYYGDGYQDVTRRVPKIDNTCADLDWVPKVSMAEAL 348
>gi|340787650|ref|YP_004753115.1| polymyxin resistance protein ArnA_DH, UDP-glucuronic acid
decarboxylase [Collimonas fungivorans Ter331]
gi|340552917|gb|AEK62292.1| Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid
decarboxylase [Collimonas fungivorans Ter331]
Length = 351
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 199/363 (54%), Gaps = 24/363 (6%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ D+I+ LL+ E+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRIRDLLDNEAYKS--RMHFFEGDITI 61
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y +PL +F LP+V+ ++ K L+ S
Sbjct: 62 NKEWVEYHVKKCDVILPLVAIATPSTYVKQPLRVFELDFEANLPIVRSAAKYGKHLVFPS 121
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D DP + S I G I K RW Y+CAKQL++R+I+
Sbjct: 122 TSEVYG------MCHDEEF--DP-------EQSELICGPINKPRWIYSCAKQLMDRVIWG 166
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGGQ
Sbjct: 167 YGMEEGLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQQ 223
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV--SGE 315
+R F YI D I+A++ +I N A+G I+N+GNP N ++R LA+MM ++ + +
Sbjct: 224 KRAFTYIDDGIDALIKIIANKDGIASGKIYNIGNPVNNYSIRDLADMMLKLATEYPEYAD 283
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+A + V+ +S +YG+GY D R+P +T +L W P T++ D L +
Sbjct: 284 SAKKVKLVETTSAAYYGKGYQDVQNRVPKITNTCDELNWKPTTTMADTLRNIFDAYRGQV 343
Query: 376 AEA 378
AEA
Sbjct: 344 AEA 346
>gi|289623804|ref|ZP_06456758.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289647101|ref|ZP_06478444.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422579959|ref|ZP_16655472.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330870355|gb|EGH05064.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 663
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 194/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L E + I +D+ +D I+ H +E +
Sbjct: 314 RPARRTRVLILGVNGFIGNHLSERLLQEDRYDIYGMDIGSDAIERLRTKPNFHFIEGDIS 373
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 374 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 420
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ ED S I G I KQRW
Sbjct: 421 RYCVKYNKRVIFPSTSEVYG------------MCQDASF---NEDTSNLIVGPINKQRWI 465
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 466 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLDR---LDSARIGSSRAITQLILHL 521
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E
Sbjct: 522 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGE 581
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q +GW P L
Sbjct: 582 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELS 641
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 642 ETIGKTLDF 650
>gi|161524584|ref|YP_001579596.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
multivorans ATCC 17616]
gi|189350660|ref|YP_001946288.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
multivorans ATCC 17616]
gi|221198133|ref|ZP_03571179.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
multivorans CGD2M]
gi|221208376|ref|ZP_03581379.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
multivorans CGD2]
gi|221215127|ref|ZP_03588094.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
multivorans CGD1]
gi|421467208|ref|ZP_15915847.1| RmlD substrate binding domain protein [Burkholderia multivorans
ATCC BAA-247]
gi|160342013|gb|ABX15099.1| NAD-dependent epimerase/dehydratase [Burkholderia multivorans ATCC
17616]
gi|189334682|dbj|BAG43752.1| UDP-glucose 4-epimerase [Burkholderia multivorans ATCC 17616]
gi|221165063|gb|EED97542.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
multivorans CGD1]
gi|221171789|gb|EEE04233.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
multivorans CGD2]
gi|221182065|gb|EEE14466.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
multivorans CGD2M]
gi|400233898|gb|EJO63403.1| RmlD substrate binding domain protein [Burkholderia multivorans
ATCC BAA-247]
Length = 351
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 200/368 (54%), Gaps = 29/368 (7%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IENP A+G I+N+GNP+N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIDDGISALMKIIENPNGIASGKIYNIGNPNNNFSVRELANKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++A + V+ +S +YG GY D R+P + Q+LGW P+++ D L
Sbjct: 276 PEYADSAKQVRLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQSTFDDALRKIFEA 335
Query: 371 QHRTYAEA 378
A+A
Sbjct: 336 YRGHVADA 343
>gi|400406182|ref|YP_006588930.1| methionyl-tRNA formyltransferase [secondary endosymbiont of
Heteropsylla cubana]
gi|400364435|gb|AFP85502.1| methionyl-tRNA formyltransferase [secondary endosymbiont of
Heteropsylla cubana]
Length = 661
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 193/370 (52%), Gaps = 50/370 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
I ++G GFIG+HL E++L E ++I LD+ D IK H +E + A+ I+
Sbjct: 319 ILILGINGFIGNHLTERLLREGNYEIYGLDIGTDAIKRFMLNSLFHFIEGDISIYAEWIE 378
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H IK D+ + L AI TP +Y PL NF + L +V++C
Sbjct: 379 YH-------------IKKCDIILPLVAIATPIEYIRNPLRVFELNFEENLKIVRHCVRYK 425
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR++ ST EVYG F E S I G I KQRW Y+ +KQL
Sbjct: 426 KRIVFPSTSEVYGMCTDPFF---------------DEYNSRLIVGPINKQRWIYSVSKQL 470
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+++A G + GL FT+ RPFNWIGPR+D +D G R + +NL+ +P+K
Sbjct: 471 LDRILWAYGEKEGLRFTLFRPFNWIGPRLD---NLDAARIGSSRAITQLISNLIEGKPIK 527
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I D IEA+ +I+N +G I N+GNP NEV++RQLAE++ E +
Sbjct: 528 LIDGGEQKRCFTDINDGIEALFRIIQNKENNCDGQIINIGNPRNEVSIRQLAELLLESFE 587
Query: 311 ------KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+ S A + +V+S +YG+GY D R P + + L W P + +
Sbjct: 588 RHPLRPRFSPFAGFQ----NVNSSSYYGKGYQDVKHRKPSIRNAQRLLAWTPSIPIRQTI 643
Query: 365 ESTLTYQHRT 374
+ TL + +T
Sbjct: 644 DQTLDFFLKT 653
>gi|157370396|ref|YP_001478385.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia proteamaculans 568]
gi|166988218|sp|A8GDR7.1|ARNA_SERP5 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|157322160|gb|ABV41257.1| NAD-dependent epimerase/dehydratase [Serratia proteamaculans 568]
Length = 660
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 191/362 (52%), Gaps = 28/362 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ +D I L G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDDRYDIYGLDIGSDAISRFL------GNPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + +
Sbjct: 534 KRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
DV S +YG+GY D + R P + + L W P ++ + TL Y RT
Sbjct: 594 FPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLDWQPTIAMQQTVADTLDYFLRTT 653
Query: 376 AE 377
+
Sbjct: 654 VQ 655
>gi|304413469|ref|ZP_07394942.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Candidatus Regiella insecticola LSR1]
gi|304284312|gb|EFL92705.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Candidatus Regiella insecticola LSR1]
Length = 689
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 200/367 (54%), Gaps = 36/367 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
KP + ++G GFIG+HL +++L E ++I LD+ +D I + R F
Sbjct: 321 KPTRVLILGVNGFIGNHLTKRLLSEDNYEIYGLDIGSDAISCFM------SHPRFHFVEG 374
Query: 76 NIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I H +E IK D+ + L AI TP +Y PL +F + L +V+ C + KR+
Sbjct: 375 DISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYKKRI 434
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R
Sbjct: 435 VFPSTSEVYG------------MCDDKEF---NEDSSRLIVGPINKQRWIYSVSKQLLDR 479
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+I+A GA+ GL+FT+ RPFNW+GPR+D +D G R + +L+ P+KL+D
Sbjct: 480 VIWAYGAKEGLKFTLFRPFNWMGPRLD---SLDAARIGSSRAITQLILDLVEGTPIKLID 536
Query: 255 GGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMT------E 307
GG+ +R F IKD IEA+ +IEN R +G I N+GNP +E ++R+LAEM+ E
Sbjct: 537 GGEQKRCFTDIKDGIEALFRIIENHDNRCDGQIINIGNPADEASIRELAEMLVKHFKQHE 596
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+Y + A ++ + S +YG+GY D R P + + L W PK S+ + ++ T
Sbjct: 597 LYNRFPPFAGYKK----IESSSYYGKGYQDVVHRTPCIKNARRLLNWQPKISMEETIKET 652
Query: 368 LTYQHRT 374
L + R+
Sbjct: 653 LDFFLRS 659
>gi|187928283|ref|YP_001898770.1| NAD-dependent epimerase/dehydratase family protein [Ralstonia
pickettii 12J]
gi|241662856|ref|YP_002981216.1| NAD-dependent epimerase/dehydratase family protein [Ralstonia
pickettii 12D]
gi|187725173|gb|ACD26338.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12J]
gi|240864883|gb|ACS62544.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12D]
Length = 352
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 198/363 (54%), Gaps = 29/363 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVYGMDMQTERLGDLVN------HPRMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y PL +F LP+V+ ++ K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPSTYVKDPLRVFELDFEANLPIVRSAAKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + DS DP +ASP ++G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYG------MCSDSEF--DP-------EASPLVYGPINKPRWIYACSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + +KLVDGG
Sbjct: 163 YGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENIKLVDGGSQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
+R F YI D I+A++ +I N A+G I+N+GNP N +VR+LA MM E A++ +
Sbjct: 219 KRAFTYIDDGIDALVRIIANKDGVASGKIYNIGNPSNNYSVRELANMMLEQAAQIDEYKD 278
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
A + V+ +S +YG GY D R+P + + LGW P T + D L +
Sbjct: 279 TAKQVQLVETTSGAYYGNGYQDVQNRVPKIANTMEDLGWKPTTVMKDALANIFEAYRTHV 338
Query: 376 AEA 378
AEA
Sbjct: 339 AEA 341
>gi|398833254|ref|ZP_10591391.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum sp. YR522]
gi|398221914|gb|EJN08309.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum sp. YR522]
Length = 351
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 197/363 (54%), Gaps = 24/363 (6%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ D+I +L+ E+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILDNEAYKS--RMHFFEGDITI 61
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y PL +F LP+V+ ++ K L+ S
Sbjct: 62 NQEWVEYHVKKCDVILPLVAIATPSTYVNAPLRVFELDFEANLPIVRSAAKYKKHLVFPS 121
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + + S I G I K RW Y+CAKQL++R+I+
Sbjct: 122 TSEVYG------------MCHDDEF---DSEESELICGPINKPRWIYSCAKQLMDRVIWG 166
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGGQ
Sbjct: 167 YGMEAGLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQQ 223
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV--SGE 315
+R F YI D I+A++ +I N A+G I+N+GNP N ++R+LA MM + A+ E
Sbjct: 224 KRAFTYIDDGIDALMKIIANEGGVASGKIYNIGNPVNNFSIRELAHMMLTLAAEYPEYAE 283
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+A + ++ +S +YG+GY D R+P +T ++L W P T++ D L +
Sbjct: 284 SAKQVQLIETTSSAYYGKGYQDVQNRVPKITNTCEELNWKPVTTMPDTLRNIFDAYRSQV 343
Query: 376 AEA 378
AEA
Sbjct: 344 AEA 346
>gi|152972353|ref|YP_001337499.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|425074434|ref|ZP_18477537.1| bifunctional polymyxin resistance protein ARNA [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|425085070|ref|ZP_18488163.1| bifunctional polymyxin resistance protein ARNA [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
gi|166988216|sp|A6TF98.1|ARNA_KLEP7 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|150957202|gb|ABR79232.1| hypothetical protein KPN_03845 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|405595899|gb|EKB69269.1| bifunctional polymyxin resistance protein ARNA [Klebsiella
pneumoniae subsp. pneumoniae WGLW1]
gi|405608485|gb|EKB81436.1| bifunctional polymyxin resistance protein ARNA [Klebsiella
pneumoniae subsp. pneumoniae WGLW3]
Length = 661
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 194/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|300311401|ref|YP_003775493.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum seropedicae
SmR1]
gi|300074186|gb|ADJ63585.1| nucleoside-diphosphate-sugar epimerase protein [Herbaspirillum
seropedicae SmR1]
Length = 351
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 198/364 (54%), Gaps = 26/364 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ D+I +LE E+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKS--RMHFFEGDITI 61
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y PL +F LP+V+ ++ K L+ S
Sbjct: 62 NQEWVEYHVKKCDVILPLVAIATPSTYVNAPLRVFELDFEANLPIVRSAAKYKKHLVFPS 121
Query: 139 TCEVYGKTIGS-FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG F P++S L I G I K RW Y+CAKQL++R+I+
Sbjct: 122 TSEVYGMCHDEEFDPEESEL----------------ICGPINKPRWIYSCAKQLMDRVIW 165
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGG
Sbjct: 166 GYGMEAGLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGGL 222
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV--SG 314
+R F YI D I+A++ +I N A+G I+N+GNP N ++++LA+MM ++ A+
Sbjct: 223 QKRAFTYIDDGIDALMKIIANEGGVASGKIYNIGNPVNNYSIKELADMMLKLAAEYPEYA 282
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
E A + V+ +S +YG+GY D R+P +T ++L W P T++ D L +
Sbjct: 283 ETAKQVKLVETTSAAYYGKGYQDVQNRVPKITNTCEELNWAPTTTMADTLRNIFDAYRSQ 342
Query: 375 YAEA 378
AEA
Sbjct: 343 VAEA 346
>gi|238749465|ref|ZP_04610970.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia rohdei ATCC 43380]
gi|238712120|gb|EEQ04333.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia rohdei ATCC 43380]
Length = 654
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 190/355 (53%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G R F +I
Sbjct: 305 VLILGVNGFIGNHLTERLLRDENYEVYGLDIGSDAISRFL------GNPRFHFVEGDISI 358
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 359 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 418
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 419 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLDRVIWA 463
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 464 YGAKENLKFTLFRPFNWMGPRLD---SLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 520
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +I+NP +G I N+GNP NE ++R+LAEM+ + K + G
Sbjct: 521 KRCFTDINDGIEALYRIIDNPKGNCDGQIINIGNPTNEASIRELAEMLLRSFEKHELRGH 580
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
D+ S +YG+GY D + R P + + L W P +L + TL +
Sbjct: 581 FPPFAGFKDIESGAYYGKGYQDVEHRKPSINNARRLLDWQPDITLQQTVTETLDF 635
>gi|307133266|ref|YP_003885282.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Dickeya dadantii 3937]
gi|306530795|gb|ADN00726.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Dickeya dadantii 3937]
Length = 663
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 189/355 (53%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I+ L G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVFGLDISSDAIERFL------GNPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L ++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKTIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + DP V ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDP---VFDEDNSNLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F IKD IEA+ +IEN +G I N+GNP NE ++RQLAE + E + K + +
Sbjct: 534 KRCFTDIKDGIEALFRIIENKDGVCDGQIINIGNPDNEASIRQLAEQLLESFEKHPLRNQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+V S +YG+GY D + R P + + L W P + + TL +
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLHWQPTIEMEKTVAETLDF 648
>gi|330000590|ref|ZP_08303736.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella sp. MS 92-3]
gi|328537962|gb|EGF64138.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella sp. MS 92-3]
Length = 485
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 194/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 142 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 195
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 196 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 255
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 256 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 300
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 301 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 357
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 358 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 417
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 418 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 473
Query: 372 HRT 374
RT
Sbjct: 474 LRT 476
>gi|378981159|ref|YP_005229300.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|419973774|ref|ZP_14489197.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419979166|ref|ZP_14494459.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419984499|ref|ZP_14499645.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419990328|ref|ZP_14505300.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419996692|ref|ZP_14511493.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420002498|ref|ZP_14517149.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420008516|ref|ZP_14523005.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420014536|ref|ZP_14528842.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420019791|ref|ZP_14533982.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420025556|ref|ZP_14539564.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420032517|ref|ZP_14546331.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420037348|ref|ZP_14551003.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420042929|ref|ZP_14556420.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048758|ref|ZP_14562070.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420054450|ref|ZP_14567623.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420059092|ref|ZP_14572101.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420065794|ref|ZP_14578598.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420070571|ref|ZP_14583222.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420078384|ref|ZP_14590842.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420081542|ref|ZP_14593849.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|421911997|ref|ZP_16341742.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421914846|ref|ZP_16344476.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|425083619|ref|ZP_18486716.1| bifunctional polymyxin resistance protein ARNA [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|425093734|ref|ZP_18496818.1| bifunctional polymyxin resistance protein ARNA [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|428150659|ref|ZP_18998426.1| Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid
decarboxylase / Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
gi|428933886|ref|ZP_19007425.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae JHCK1]
gi|428942149|ref|ZP_19015161.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae VA360]
gi|364520570|gb|AEW63698.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397347664|gb|EJJ40770.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397349986|gb|EJJ43077.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397354160|gb|EJJ47222.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397364739|gb|EJJ57368.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397367067|gb|EJJ59680.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397370916|gb|EJJ63470.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397378072|gb|EJJ70291.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397383109|gb|EJJ75257.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397388582|gb|EJJ80550.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397397005|gb|EJJ88687.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397397493|gb|EJJ89168.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397405640|gb|EJJ97096.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397414721|gb|EJK05917.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397415331|gb|EJK06517.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397422843|gb|EJK13792.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397431064|gb|EJK21747.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397435959|gb|EJK26561.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397441481|gb|EJK31854.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397444932|gb|EJK35191.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397453089|gb|EJK43152.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|405598111|gb|EKB71340.1| bifunctional polymyxin resistance protein ARNA [Klebsiella
pneumoniae subsp. pneumoniae WGLW2]
gi|405610709|gb|EKB83504.1| bifunctional polymyxin resistance protein ARNA [Klebsiella
pneumoniae subsp. pneumoniae WGLW5]
gi|410114199|emb|CCM84367.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410122873|emb|CCM87101.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426299218|gb|EKV61569.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae VA360]
gi|426304114|gb|EKV66266.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae JHCK1]
gi|427539352|emb|CCM94564.1| Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid
decarboxylase / Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Klebsiella
pneumoniae subsp. pneumoniae ST512-K30BO]
Length = 661
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 194/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|238896942|ref|YP_002921687.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402778566|ref|YP_006634112.1| polymyxin resistance protein ArnA_DH [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|238549269|dbj|BAH65620.1| hypothetical protein KP1_5182 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|402539136|gb|AFQ63285.1| Polymyxin resistance protein ArnA_DH [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 661
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 195/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|365140825|ref|ZP_09346767.1| bifunctional polymyxin resistance protein ARNA [Klebsiella sp.
4_1_44FAA]
gi|363653262|gb|EHL92240.1| bifunctional polymyxin resistance protein ARNA [Klebsiella sp.
4_1_44FAA]
Length = 661
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 194/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|237732290|ref|ZP_04562771.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Citrobacter sp. 30_2]
gi|226907829|gb|EEH93747.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Citrobacter sp. 30_2]
Length = 660
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 193/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVYGLDIGSDAIGRFLQ------HPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG V ED+S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------VFDEDSSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I+D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + K + +
Sbjct: 534 ERCFTDIRDGIEALYRIIENEGGRCDGEIINIGNPQNEASIQELAEMLLSCFEKHPLRNQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
DV S +YG+GY D + R P++ + L W P + + +E TL + R+
Sbjct: 594 FPPFAGFRDVESSSYYGKGYQDVEHRKPNIRNAKRCLNWEPTIEMQETVEETLDFFLRS 652
>gi|251791777|ref|YP_003006498.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Dickeya zeae Ech1591]
gi|247540398|gb|ACT09019.1| NAD-dependent epimerase/dehydratase [Dickeya zeae Ech1591]
Length = 663
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 189/355 (53%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I+ L G F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVFGLDISSDAIERFL------GNPHFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L ++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKTIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + DP V ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDP---VFDEDNSNLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F IKD IEA+ +IEN +G I N+GNP NE ++RQLAEM+ E + K + +
Sbjct: 534 KRCFTDIKDGIEALFRIIENKDGVCDGQIINIGNPDNEASIRQLAEMLLESFEKHPLRNQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+V S +YG+GY D + R P + + L W P + + TL +
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLHWQPTIEMEKTVAETLDF 648
>gi|415905331|ref|ZP_11552502.1| NAD-dependent epimerase/dehydratase [Herbaspirillum frisingense
GSF30]
gi|407763354|gb|EKF72032.1| NAD-dependent epimerase/dehydratase [Herbaspirillum frisingense
GSF30]
Length = 351
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 197/364 (54%), Gaps = 26/364 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ D+I +LE E+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKS--RMHFFEGDITI 61
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y PL +F LP+V+ ++ K L+ S
Sbjct: 62 NQEWVEYHVKKCDVILPLVAIATPSTYVNAPLRVFELDFEANLPIVRSAAKYKKHLVFPS 121
Query: 139 TCEVYGKTIGS-FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG F P++S L I G I K RW Y+CAKQL++R+I+
Sbjct: 122 TSEVYGMCHDEEFDPEESEL----------------ICGPINKPRWIYSCAKQLMDRVIW 165
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGG
Sbjct: 166 GYGMEAGLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGGL 222
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV--SG 314
+R F YI D I+A++ +I N A G I+N+GNP N +++ LA+MM ++ A+
Sbjct: 223 QKRAFTYIDDGIDALMKIIANEGGVATGKIYNIGNPVNNYSIKDLADMMLKLAAEYPEYA 282
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+ A + V+ +S +YG+GY D R+P +T ++L W PKT++ D L +
Sbjct: 283 DTAKQVQLVETTSAAYYGKGYQDVQNRVPKITNTCEELNWAPKTTMADTLRNIFDAYRSQ 342
Query: 375 YAEA 378
AEA
Sbjct: 343 VAEA 346
>gi|386036978|ref|YP_005956891.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|424832812|ref|ZP_18257540.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|339764106|gb|AEK00327.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae KCTC 2242]
gi|414710256|emb|CCN31960.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 661
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 194/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|344942204|ref|ZP_08781492.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum
SV96]
gi|344263396|gb|EGW23667.1| NAD-dependent epimerase/dehydratase [Methylobacter tundripaludum
SV96]
Length = 351
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 203/370 (54%), Gaps = 41/370 (11%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR--L 75
+ + ++G GFIG HL ++IL T + +D+ +++++ E E R F +
Sbjct: 1 MNVLILGVNGFIGHHLSKRILETTDWHVYGMDMQSNRVEAFREHE------RFHFFEGDI 54
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I H+ +E IK D+ + L AI TPA Y T PL +F LP+++ C + KR++
Sbjct: 55 TINHEW-MEYHIKKCDVILPLVAIATPATYVTHPLAVFELDFEANLPIIRACVKYRKRVL 113
Query: 136 HFSTCEVYGKTIG-SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
ST EVYG F P +S L + G + K RW Y+C+KQL++R
Sbjct: 114 FPSTSEVYGMCKDDEFHPYESEL----------------VLGPLNKPRWIYSCSKQLLDR 157
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+I A G E G ++T+ RPFNWIGP +D I P EG RV+ F ++ R + +KLVD
Sbjct: 158 VICAYGQEQGFDYTLFRPFNWIGPGLD---SIHTPKEGSSRVVTQFLGHIARGESIKLVD 214
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV----- 308
GGQ +R+F ++ D I+A++ +I+N +A G+I+N+GNP N++++R+LAE+M ++
Sbjct: 215 GGQQRRSFTFVSDGIDALVRIIKNENGKATGNIYNIGNPANDLSIRELAELMLKIAKEHP 274
Query: 309 -YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
Y ++ + L +D S+ ++YG+GY D R+P + L W P+ ++ D L
Sbjct: 275 EYKDLAAKVEL----IDTSANDYYGKGYQDVKTRVPWIGNTMDDLSWKPEVTVEDALRKI 330
Query: 368 L-TYQHRTYA 376
Y H A
Sbjct: 331 FDAYSHEVAA 340
>gi|309782218|ref|ZP_07676947.1| polymyxin resistance protein ARNA [Ralstonia sp. 5_7_47FAA]
gi|404377913|ref|ZP_10983013.1| hypothetical protein HMPREF0989_01570 [Ralstonia sp. 5_2_56FAA]
gi|308918989|gb|EFP64657.1| polymyxin resistance protein ARNA [Ralstonia sp. 5_7_47FAA]
gi|348616032|gb|EGY65538.1| hypothetical protein HMPREF0989_01570 [Ralstonia sp. 5_2_56FAA]
Length = 352
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 197/363 (54%), Gaps = 29/363 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVYGMDMQTERLGDLVN------HPRMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y PL +F LP+V+ ++ K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPSTYVKDPLRVFELDFEANLPIVRSAAKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + DS DP +ASP ++G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYG------MCSDSEF--DP-------EASPLVYGPINKPRWIYACSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + +KLVDGG
Sbjct: 163 YGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENIKLVDGGSQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
+R F YI D I+A++ +I N A+G I+N+GNP N +VR+LA MM E A + +
Sbjct: 219 KRAFTYIDDGIDALVRIIANENGVASGKIYNIGNPSNNYSVRELANMMLEQAANIDEYKD 278
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
A + V+ +S +YG GY D R+P + + LGW P T + D L +
Sbjct: 279 TAKQVQLVETTSGAYYGNGYQDVQNRVPKIANTMEDLGWKPTTVMKDALANIFEAYRTHV 338
Query: 376 AEA 378
AEA
Sbjct: 339 AEA 341
>gi|421492035|ref|ZP_15939397.1| ARNA [Morganella morganii subsp. morganii KT]
gi|455739588|ref|YP_007505854.1| Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Morganella
morganii subsp. morganii KT]
gi|400193795|gb|EJO26929.1| ARNA [Morganella morganii subsp. morganii KT]
gi|455421151|gb|AGG31481.1| Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Morganella
morganii subsp. morganii KT]
Length = 661
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 196/374 (52%), Gaps = 44/374 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I + G +R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLEDGNYDIYGMDISSSAIDRFI------GDERFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC++ NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCAKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+ +A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLDRVSWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K
Sbjct: 534 KRCFTDIHDGIEALFRIIENRDGKCDGQIINIGNPVNEASIRELAEMLLDCFEK------ 587
Query: 318 LEEPTVD----------VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
P D + S +YG+GY D + R P + + LGW P +E T
Sbjct: 588 --HPLRDNFPPFAGFRKIESSTYYGKGYQDVEHRKPSIKNAERLLGWKPTIDTRQTVEET 645
Query: 368 LTYQHRTYAEAIKQ 381
L + R E ++
Sbjct: 646 LDFFLRGAVEELRN 659
>gi|410086771|ref|ZP_11283479.1| Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Morganella
morganii SC01]
gi|409766991|gb|EKN51079.1| Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Morganella
morganii SC01]
Length = 661
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 129/374 (34%), Positives = 196/374 (52%), Gaps = 44/374 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I + G +R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLEDGNYDIYGMDISSSAIDRFI------GDERFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC++ NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCAKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---SLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K
Sbjct: 534 KRCFTDIHDGIEALFRIIENRDGKCDGQIINIGNPVNEASIRELAEMLLDCFEK------ 587
Query: 318 LEEPTVD----------VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
P D + S +YG+GY D + R P + + L W P +E T
Sbjct: 588 --HPLRDNFPPFAGFRKIESSTYYGKGYQDVEHRKPSIKNAERLLDWKPTIDTRQTVEET 645
Query: 368 LTYQHRTYAEAIKQ 381
L + R E ++
Sbjct: 646 LDFFLRGAVEELRN 659
>gi|83719143|ref|YP_442711.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
thailandensis E264]
gi|257138923|ref|ZP_05587185.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
thailandensis E264]
gi|83652968|gb|ABC37031.1| conserved hypothetical protein [Burkholderia thailandensis E264]
Length = 351
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 195/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYKKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG + D DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYG------MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F Y+ D I A++ +IENP A G I+N+GNP+N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTYVDDGISALMKIIENPNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A V+ +S +YG GY D R+P + ++LGW P+ + D L
Sbjct: 276 PEYTDSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMRELGWAPQFTFDDALRQIF 333
>gi|226330383|ref|ZP_03805901.1| hypothetical protein PROPEN_04301 [Proteus penneri ATCC 35198]
gi|225201178|gb|EEG83532.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Proteus penneri ATCC 35198]
Length = 574
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 194/364 (53%), Gaps = 28/364 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G R F ++
Sbjct: 232 VLILGVNGFIGNHLTERLLKDDNYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSI 285
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 286 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 345
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 346 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLDRVIWA 390
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 391 YGAKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 447
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K + G
Sbjct: 448 KRCFTDINDGIEALFRIIENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGH 507
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+ S +YG+GY D + R P + + L W P +E TL + R
Sbjct: 508 FPPFAGFKKIESSSYYGKGYQDVEHRKPSIKNAERLLDWKPSIETRQTVEETLDFFLRGA 567
Query: 376 AEAI 379
E +
Sbjct: 568 VEEL 571
>gi|456063724|ref|YP_007502694.1| NAD-dependent epimerase/dehydratase [beta proteobacterium CB]
gi|455441021|gb|AGG33959.1| NAD-dependent epimerase/dehydratase [beta proteobacterium CB]
Length = 348
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 202/371 (54%), Gaps = 41/371 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ ND++ L+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWDVYGMDMQNDRLGDLVN------HPRMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHIRKCDVILPLVAIATPATYVQQPLKVFELDFEANLPIVRSAVKYKKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + +D DPA S ++G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYG------MCEDGEF--DPA-------KSNMVYGPINKPRWIYACSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + +VDGG
Sbjct: 163 YGME-GLRFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGESINVVDGGAQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV------YAK 311
+R F Y+ D I+A++ +I+N ANG I+N+GNP N ++R+LA M E+ YAK
Sbjct: 219 KRAFTYVDDGIDALMRIIDNKDGVANGKIYNIGNPKNNHSIRELANQMLEIARSIPEYAK 278
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+ E + V+ +S +YGEGY D R+P + +LGW P T++ D L++
Sbjct: 279 TANEVKI----VETTSGAYYGEGYQDVQNRVPAIDNTMSELGWKPTTNMSDALKNIF--- 331
Query: 372 HRTYAEAIKQA 382
Y E +++A
Sbjct: 332 -EAYREDVEKA 341
>gi|416016872|ref|ZP_11564109.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|416027013|ref|ZP_11570344.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|416028140|ref|ZP_11571240.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|422407622|ref|ZP_16484588.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320324080|gb|EFW80162.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320327838|gb|EFW83845.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|320328674|gb|EFW84674.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330885493|gb|EGH19642.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 663
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 194/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L + + I +D+ +D I+ H +E +
Sbjct: 314 RPARRTRVLILGVNGFIGNHLSERLLQDDRYDIYGMDIGSDAIERLRTKPNFHFIEGDIS 373
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 374 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 420
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ ED S I G I KQRW
Sbjct: 421 RYCVKYNKRVIFPSTSEVYG------------MCQDASF---NEDTSNLIVGPINKQRWI 465
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 466 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHL 521
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E
Sbjct: 522 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGE 581
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q +GW P L
Sbjct: 582 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELS 641
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 642 ETIGKTLDF 650
>gi|339717739|pdb|3SLG|A Chain A, Crystal Structure Of Pbgp3 Protein From Burkholderia
Pseudomallei
gi|339717740|pdb|3SLG|B Chain B, Crystal Structure Of Pbgp3 Protein From Burkholderia
Pseudomallei
gi|339717741|pdb|3SLG|C Chain C, Crystal Structure Of Pbgp3 Protein From Burkholderia
Pseudomallei
gi|339717742|pdb|3SLG|D Chain D, Crystal Structure Of Pbgp3 Protein From Burkholderia
Pseudomallei
gi|339717743|pdb|3SLG|E Chain E, Crystal Structure Of Pbgp3 Protein From Burkholderia
Pseudomallei
gi|339717744|pdb|3SLG|F Chain F, Crystal Structure Of Pbgp3 Protein From Burkholderia
Pseudomallei
Length = 372
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 194/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 75
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 76 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKH 135
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG + D DP DAS +G I K RW YAC+KQL++
Sbjct: 136 LVFPSTSEVYG------MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMD 180
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 181 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 236
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F Y+ D I A++ +IEN A G I+N+GNP+N +VR+LA M E+ A+
Sbjct: 237 DGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF 296
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A V+ +S +YG GY D R+P + Q+LGW P+ + D L
Sbjct: 297 PEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIF 354
>gi|422595125|ref|ZP_16669414.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. lachrymans
str. M301315]
gi|330985431|gb|EGH83534.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 663
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 194/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L + + I +D+ +D I+ H +E +
Sbjct: 314 RPARRTRVLILGVNGFIGNHLSERLLQDDRYDIYGMDIGSDAIERLRTKPNFHFIEGDIS 373
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 374 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 420
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ ED S I G I KQRW
Sbjct: 421 RYCVKYNKRVIFPSTSEVYG------------MCQDASF---NEDTSNLIVGPINKQRWI 465
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 466 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLDR---LDSARIGSSRAITQLILHL 521
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E
Sbjct: 522 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGE 581
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q +GW P L
Sbjct: 582 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELS 641
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 642 ETIGKTLDF 650
>gi|257484198|ref|ZP_05638239.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|422678925|ref|ZP_16737199.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
gi|331008272|gb|EGH88329.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. tabaci str.
ATCC 11528]
Length = 663
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 194/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L + + I +D+ +D I+ H +E +
Sbjct: 314 RPARRTRVLILGVNGFIGNHLSERLLQDDRYDIYGMDIGSDAIERLRTKPNFHFIEGDIS 373
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +YN PL +F + L +V
Sbjct: 374 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYNRNPLRVFELDFEENLKIV 420
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + KR+I ST EVYG + QD ++ ED S I G I KQRW
Sbjct: 421 RYCVKYTKRVIFPSTSEVYG------------MCQDASF---NEDTSNLIVGPINKQRWI 465
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 466 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLDR---LDSARIGSSRAITQLILHL 521
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E
Sbjct: 522 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGE 581
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q +GW P L
Sbjct: 582 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELS 641
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 642 ETIGKTLDF 650
>gi|422645027|ref|ZP_16708164.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. maculicola
str. ES4326]
gi|330958578|gb|EGH58838.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 663
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 201/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+ G+ +R RP++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 302 VQGSQLRDAKMQRPVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 361
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 362 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 408
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD ++ ED S
Sbjct: 409 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDASF---NEDTSN 453
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
+ G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 454 LVVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 509
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 510 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGRCNGQIINIGN 569
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + D+ S+ FYG+GY D R P +
Sbjct: 570 PDNEASIRQLGEELLRQFEAHPLRDNFPPFAGFRDIESQSFYGKGYQDVSHRKPGIDNAR 629
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
Q +GW P +L + + TL +
Sbjct: 630 QLIGWAPGIALSETIGKTLDF 650
>gi|76810898|ref|YP_333799.1| NAD-dependent epimerase/dehydratase [Burkholderia pseudomallei
1710b]
gi|126441271|ref|YP_001059275.1| NAD-dependent epimerase/dehydratase [Burkholderia pseudomallei 668]
gi|134277633|ref|ZP_01764348.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 305]
gi|167719206|ref|ZP_02402442.1| hypothetical protein BpseD_09287 [Burkholderia pseudomallei DM98]
gi|167918607|ref|ZP_02505698.1| hypothetical protein BpseBC_08635 [Burkholderia pseudomallei
BCC215]
gi|217421877|ref|ZP_03453381.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 576]
gi|226197431|ref|ZP_03793008.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pakistan 9]
gi|237812598|ref|YP_002897049.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei MSHR346]
gi|242317160|ref|ZP_04816176.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106b]
gi|254179503|ref|ZP_04886102.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1655]
gi|254189107|ref|ZP_04895618.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|254197787|ref|ZP_04904209.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei S13]
gi|254259330|ref|ZP_04950384.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1710a]
gi|386861489|ref|YP_006274438.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1026b]
gi|418382891|ref|ZP_12966814.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 354a]
gi|418533759|ref|ZP_13099618.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1026a]
gi|418540632|ref|ZP_13106159.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1258a]
gi|418546877|ref|ZP_13112065.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1258b]
gi|418553094|ref|ZP_13117935.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 354e]
gi|76580351|gb|ABA49826.1| PbgP3 protein [Burkholderia pseudomallei 1710b]
gi|126220764|gb|ABN84270.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 668]
gi|134251283|gb|EBA51362.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 305]
gi|157936786|gb|EDO92456.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|169654528|gb|EDS87221.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei S13]
gi|184210043|gb|EDU07086.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1655]
gi|217395619|gb|EEC35637.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 576]
gi|225930810|gb|EEH26820.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei Pakistan 9]
gi|237504919|gb|ACQ97237.1| bifunctional polymyxin resistance protein ArnA [Burkholderia
pseudomallei MSHR346]
gi|242140399|gb|EES26801.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106b]
gi|254218019|gb|EET07403.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1710a]
gi|385360719|gb|EIF66633.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1026a]
gi|385361006|gb|EIF66908.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1258a]
gi|385362805|gb|EIF68603.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1258b]
gi|385372210|gb|EIF77335.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 354e]
gi|385376908|gb|EIF81539.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 354a]
gi|385658617|gb|AFI66040.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1026b]
Length = 351
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 194/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG + D DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYG------MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F Y+ D I A++ +IEN A G I+N+GNP+N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A V+ +S +YG GY D R+P + Q+LGW P+ + D L
Sbjct: 276 PEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIF 333
>gi|197284923|ref|YP_002150795.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Proteus mirabilis HI4320]
gi|227355326|ref|ZP_03839727.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Proteus mirabilis ATCC 29906]
gi|425067883|ref|ZP_18470999.1| bifunctional polymyxin resistance protein ARNA [Proteus mirabilis
WGLW6]
gi|254806287|sp|B4ETL7.1|ARNA_PROMH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|194682410|emb|CAR42271.1| bifunctional polymyxin resistance protein [includes: UDP-glucuronic
acid decarboxylase and UDP-4-amino-4-deoxy-l-arabinose
formyltransferase [Proteus mirabilis HI4320]
gi|227164550|gb|EEI49421.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Proteus mirabilis ATCC 29906]
gi|404600621|gb|EKB01051.1| bifunctional polymyxin resistance protein ARNA [Proteus mirabilis
WGLW6]
Length = 660
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 194/364 (53%), Gaps = 28/364 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K + G
Sbjct: 534 KRCFTDINDGIEALFRIIENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+ S +YG+GY D + R P + + L W P +E TL + R
Sbjct: 594 FPPFAGFKKIESSSYYGKGYQDVEHRKPSIKNAERLLDWKPTIETRQTVEETLDFFLRGA 653
Query: 376 AEAI 379
E +
Sbjct: 654 VEEL 657
>gi|53726055|ref|YP_103049.1| NAD-dependent epimerase/dehydratase [Burkholderia mallei ATCC
23344]
gi|121600025|ref|YP_993202.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei SAVP1]
gi|124383888|ref|YP_001026023.1| NAD-dependent epimerase/dehydratase [Burkholderia mallei NCTC
10229]
gi|167003859|ref|ZP_02269638.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei PRL-20]
gi|238563721|ref|ZP_00438410.2| bifunctional polymyxin resistance protein ArnA (Polymyxin
resistance protein pmrI) [Burkholderia mallei GB8 horse
4]
gi|254178703|ref|ZP_04885358.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|254358259|ref|ZP_04974532.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei 2002721280]
gi|262193270|ref|YP_001080709.2| NAD-dependent epimerase/dehydratase [Burkholderia mallei NCTC
10247]
gi|52429478|gb|AAU50071.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
gi|121228835|gb|ABM51353.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124291908|gb|ABN01177.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|148027386|gb|EDK85407.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei 2002721280]
gi|160699742|gb|EDP89712.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
gi|238520120|gb|EEP83583.1| bifunctional polymyxin resistance protein ArnA (Polymyxin
resistance protein pmrI) [Burkholderia mallei GB8 horse
4]
gi|243060684|gb|EES42870.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
mallei PRL-20]
gi|261835082|gb|ABO06577.2| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
Length = 351
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 194/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L++ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG + D DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYG------MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F Y+ D I A++ +IEN A G I+N+GNP+N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A V+ +S +YG GY D R+P + Q+LGW P+ + D L
Sbjct: 276 PEYADSAKRVKLVETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIF 333
>gi|425072716|ref|ZP_18475822.1| bifunctional polymyxin resistance protein ARNA [Proteus mirabilis
WGLW4]
gi|404596490|gb|EKA97010.1| bifunctional polymyxin resistance protein ARNA [Proteus mirabilis
WGLW4]
Length = 660
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 194/364 (53%), Gaps = 28/364 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K + G
Sbjct: 534 KRCFTDINDGIEALFRIIENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+ S +YG+GY D + R P + + L W P +E TL + R
Sbjct: 594 FPPFAGFKKIESSSYYGKGYQDVEHRKPSIKNAERLLDWKPTIETRQTVEETLDFFLRGA 653
Query: 376 AEAI 379
E +
Sbjct: 654 VEEL 657
>gi|385870839|gb|AFI89359.1| Bifunctional polymyxin resistance protein ArnA [Pectobacterium sp.
SCC3193]
Length = 673
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 195/371 (52%), Gaps = 29/371 (7%)
Query: 9 DLDGRPIKPVT-ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGA 67
+LD R + T + ++G GFIG+HL E++L + ++I LD+ +D I L+
Sbjct: 313 NLDSRAQRRRTRVLILGVNGFIGNHLTERLLRDDRYEIYGLDISSDAIARFLDDP----- 367
Query: 68 DRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
R F +I H+ +E IK D+ + L AI TP +Y PL +F + L +V+
Sbjct: 368 -RFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRD 426
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
C NKR++ ST EVYG + D + ED S I G I K RW Y+
Sbjct: 427 CVRYNKRIVFPSTSEVYG------------MCDDKEF---DEDTSRLIVGPINKPRWIYS 471
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
+KQL++R+I+A GA+N L FT+ RPFNW+GPR+D +D G R + NL+
Sbjct: 472 VSKQLLDRVIWAYGAKNNLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVE 528
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMM 305
P+KLVDGG+ +R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L +M+
Sbjct: 529 GSPIKLVDGGEQKRCFTDIHDGIEALFRIIENRNGQCDGRIINIGNPHNEASIRELGDML 588
Query: 306 TEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
+ + +DV S +YG+GY D R P + + L W P +
Sbjct: 589 LTSFDAHPLRDRFPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQT 648
Query: 364 LESTLTYQHRT 374
+ TL Y RT
Sbjct: 649 VAETLDYFLRT 659
>gi|237797315|ref|ZP_04585776.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331020165|gb|EGI00222.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 651
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 194/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP++ + ++G GFIG+HL E++L + ++I +D+ +D I+ H +E +
Sbjct: 302 RPVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRTQPNFHFIEGDIS 361
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 362 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 408
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ ED S + G I KQRW
Sbjct: 409 RYCVKYNKRVIFPSTSEVYG------------MCQDESF---NEDTSNLVVGPINKQRWI 453
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 454 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHL 509
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E
Sbjct: 510 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGE 569
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + DV S+ FYG+GY D R P + Q +GW P L
Sbjct: 570 ELLRQFEAHPLRDNFPPFAGFRDVESQSFYGKGYQDVSHRKPSIANARQLIGWTPGIELS 629
Query: 362 DLLESTLTY 370
+ TL +
Sbjct: 630 TTIGKTLDF 638
>gi|134295893|ref|YP_001119628.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
vietnamiensis G4]
gi|387902408|ref|YP_006332747.1| polymyxin resistance protein ArnA_DH, UDP-glucuronic acid
decarboxylase [Burkholderia sp. KJ006]
gi|134139050|gb|ABO54793.1| NAD-dependent epimerase/dehydratase [Burkholderia vietnamiensis G4]
gi|387577300|gb|AFJ86016.1| Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid
decarboxylase [Burkholderia sp. KJ006]
Length = 351
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/354 (36%), Positives = 194/354 (54%), Gaps = 29/354 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IEN A+G I+N+GNPHN +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIDDGISALMKIIENKGGVASGKIYNIGNPHNNFSVRELAHKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
++A + V+ +S +YG GY D R+P + Q+L W P+++ D L
Sbjct: 276 PEYADSAKQVKLVETTSGAYYGNGYQDVQNRVPKIDNTMQELAWAPQSTFDDAL 329
>gi|395230477|ref|ZP_10408781.1| bifunctional polymyxin resistance protein ARNA [Citrobacter sp. A1]
gi|424731462|ref|ZP_18160046.1| bifunctional polymyxin resistance protein arna [Citrobacter sp.
L17]
gi|394715862|gb|EJF21647.1| bifunctional polymyxin resistance protein ARNA [Citrobacter sp. A1]
gi|422894113|gb|EKU33928.1| bifunctional polymyxin resistance protein arna [Citrobacter sp.
L17]
Length = 660
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVYGLDIGSDAISRFLQ------HPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG V ED+S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------VFDEDSSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I+D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + K +
Sbjct: 534 KRCFTDIRDGIEALYRIIENEGGRCDGEIINIGNPENEASIQELAEMLLTCFEKHPLRNH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
DV S +YG+GY D + R P++ + L W P + + +E TL + R+
Sbjct: 594 FPPFAGFRDVESSSYYGKGYQDVEHRKPNIRNAKRCLNWEPTIEMQETVEETLDFFLRS 652
>gi|421846022|ref|ZP_16279173.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411772791|gb|EKS56386.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Citrobacter freundii ATCC 8090 = MTCC
1658]
Length = 660
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVYGLDIGSDAISRFLQ------HPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG V ED+S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------VFDEDSSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I+D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + K +
Sbjct: 534 KRCFTDIRDGIEALYRIIENEGGRCDGEIINIGNPENEASIQELAEMLLTCFEKHPLRNH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
DV S +YG+GY D + R P++ + L W P + + +E TL + R+
Sbjct: 594 FPPFAGFRDVESSSYYGKGYQDVEHRKPNIRNAKRCLNWEPTIEMQETVEETLDFFLRS 652
>gi|455644436|gb|EMF23536.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Citrobacter freundii GTC 09479]
Length = 660
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVYGLDIGSDAISRFLQ------HPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG V ED+S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------VFDEDSSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I+D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + K +
Sbjct: 534 KRCFTDIRDGIEALYRIIENEGGRCDGEIINIGNPENEASIQELAEMLLTCFEKHPLRNH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
DV S +YG+GY D + R P++ + L W P + + +E TL + R+
Sbjct: 594 FPPFAGFRDVESSSYYGKGYQDVEHRKPNIRNAKRCLNWEPTIEMQETVEETLDFFLRS 652
>gi|374369315|ref|ZP_09627348.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
basilensis OR16]
gi|373099136|gb|EHP40224.1| NAD-dependent epimerase/dehydratase family protein [Cupriavidus
basilensis OR16]
Length = 350
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 200/364 (54%), Gaps = 30/364 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL T ++ +D+ +D++ L++ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLTRRILETTSWEVYGMDMSSDRLGDLID------HPRMHFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWIEYNIRKCDVVLPLVAIATPATYVRQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D DP + S I G I K RW YAC+KQL++R+I+A
Sbjct: 118 TSEVYG------MCHDDEF--DP-------ETSELICGPINKPRWIYACSKQLMDRVIHA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL +T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG
Sbjct: 163 YGMEQGLNYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV---YAKVSG 314
+R F + D I A++ +IENP A G I+N+GNP N +VR+LAEMM ++ YA+ +
Sbjct: 220 KRAFADVTDGINALMRIIENPNGIATGKIYNIGNPRNIHSVRELAEMMLKMAGDYAEYAE 279
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
EA + V+ SS +FYG+GY D R+P + ++LGW P+ ++ D L +
Sbjct: 280 EAK-KTQIVETSSGDFYGKGYQDVQNRVPKIDNTVEELGWKPEVTMEDALRAIFEAYRSK 338
Query: 375 YAEA 378
EA
Sbjct: 339 VVEA 342
>gi|365108491|ref|ZP_09336350.1| bifunctional polymyxin resistance protein ARNA [Citrobacter
freundii 4_7_47CFAA]
gi|363640385|gb|EHL79856.1| bifunctional polymyxin resistance protein ARNA [Citrobacter
freundii 4_7_47CFAA]
Length = 660
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVYGLDIGSDAIGRFLQ------HPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG V ED+S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------VFDEDSSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I+D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + K +
Sbjct: 534 KRCFTDIRDGIEALYRIIENEGGRCDGEIINIGNPQNEASIQELAEMLLSCFEKHPLRNH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
DV S +YG+GY D + R P++ + L W P + + +E TL + R+
Sbjct: 594 FPPFAGFRDVESSSYYGKGYQDVEHRKPNIRNAKRCLNWEPTIEMQETVEETLDFFLRS 652
>gi|395235832|ref|ZP_10414034.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter sp. Ag1]
gi|394729483|gb|EJF29465.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter sp. Ag1]
Length = 660
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 199/373 (53%), Gaps = 32/373 (8%)
Query: 10 LDGRPIKPVT----ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L +P+ + + ++G GFIG+HL E++L + +I LD+ +D I +
Sbjct: 304 LSSKPVSAIKRRTRVLILGVNGFIGNHLTERLLRDDNFEIFGLDIGSDAISRFI------ 357
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
G +R F +I H +E IK D+ + L AI TP +Y PL +F + L ++
Sbjct: 358 GNERFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKII 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+ C + KR+I ST EVYG + D ++ ED SP I G I KQRW
Sbjct: 418 RDCVKYKKRIIFPSTSEVYG------------MCTDKSF---DEDNSPLIVGPINKQRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL+DGG+ +R F I D IEA+ +IEN +G I N+GNP NE +++QLAE
Sbjct: 520 VEGSPIKLIDGGKQKRCFTDIGDGIEALFRIIENKNNNCDGQIINIGNPDNEASIKQLAE 579
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
M+ E + + + + +V S +YG+GY D + R P + + L W P+ +
Sbjct: 580 MLLESFERHPLRSQFPPFAGFREVESSAYYGKGYQDVEHRKPSIRNAQRLLEWTPEVHME 639
Query: 362 DLLESTLTYQHRT 374
++ TL + +T
Sbjct: 640 KTIDETLDFFLKT 652
>gi|430809874|ref|ZP_19436989.1| NAD-dependent epimerase/dehydratase family protein, partial
[Cupriavidus sp. HMR-1]
gi|429497587|gb|EKZ96115.1| NAD-dependent epimerase/dehydratase family protein, partial
[Cupriavidus sp. HMR-1]
Length = 341
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 189/338 (55%), Gaps = 28/338 (8%)
Query: 27 GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR-LEG 85
GFIG HL +IL T ++ +D+ +D++ L+ R+ F +I + +E
Sbjct: 2 GFIGHHLTRRILETTQWEVYGMDMSSDRLGDLV------NHPRMHFFEGDITINKEWIEY 55
Query: 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145
I+ D+ + L AI TPA Y PL +F LP+V+ + K L+ ST EVYG
Sbjct: 56 NIRKCDVVLPLVAIATPATYVREPLRVFELDFEANLPIVRAAVKYGKHLVFPSTSEVYG- 114
Query: 146 TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL 205
+ D DP +ASP I+G I K RW YAC+KQL++R+I+A G + GL
Sbjct: 115 -----MCADEEF--DP-------EASPLIYGPINKPRWIYACSKQLMDRVIHAYGMQEGL 160
Query: 206 EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYI 265
+T+ RPFNWIG +D I EG RV+ F +++R +P+KLVDGG QR F I
Sbjct: 161 NYTLFRPFNWIGAGLD---SIFESKEGSSRVVTQFLGHIVRGEPIKLVDGGAQQRAFADI 217
Query: 266 KDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GEAALEEPT 322
D I A++ +IEN ANG IFN+GNP N +VR+LAEMM ++ A+ E A +
Sbjct: 218 SDGISALMRIIENKDGVANGKIFNIGNPGNIHSVRELAEMMLKMAAEYPEYAEEARKTKI 277
Query: 323 VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
V+ SS +FYG+GY D R+P + +LGW P+ S+
Sbjct: 278 VETSSGDFYGKGYQDVQHRVPKIDNTIAELGWKPEVSM 315
>gi|424931343|ref|ZP_18349715.1| Bifunctional polymyxin resistance protein ArnA [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|407805530|gb|EKF76781.1| Bifunctional polymyxin resistance protein ArnA [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
Length = 661
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 193/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPTVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|238027029|ref|YP_002911260.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
glumae BGR1]
gi|237876223|gb|ACR28556.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
glumae BGR1]
Length = 351
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 193/358 (53%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVN------HPRMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F Y+ D I A++ +IEN A G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTYVDDGISALMKIIENRDGVATGKIYNIGNPSNNYSVRELAHKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A V+ +S +YG GY D R+P + Q+LGW P+T+ D L +
Sbjct: 276 PEYADSAKNVQLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPETTFDDALRNIF 333
>gi|420373929|ref|ZP_14873992.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
1235-66]
gi|391316952|gb|EIQ74337.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
1235-66]
Length = 660
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 199/373 (53%), Gaps = 32/373 (8%)
Query: 10 LDGRPI----KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L+ +P+ + + ++G GFIG+HL E++L E ++I LD+ +D I+ L+
Sbjct: 304 LNSQPVSASKRRTRVLILGVNGFIGNHLTERLLREDNYEIYGLDIGSDAIERFLQ----- 358
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
R F +I H +E +K D+ + L AI TP +Y PL +F + L ++
Sbjct: 359 -HPRFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKII 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + KR+I ST EVYG KD ED+S I G + K RW
Sbjct: 418 RYCVKYRKRIIFPSTSEVYGMCTD----KD-----------FDEDSSNLIVGPVNKPRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL++GG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++++LAE
Sbjct: 520 VEGSPIKLIEGGKQKRCFTDIRDGIEALFRIIENEGGRCDGEIINIGNPDNEASIQELAE 579
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
M+ + K + DV S +YG+GY D + R P + + L W P +
Sbjct: 580 MLLSCFEKHPLRQHFPPFAGFRDVESSSYYGKGYQDVEHRKPSIRNAKRCLNWEPTIEMQ 639
Query: 362 DLLESTLTYQHRT 374
+ +E TL + R+
Sbjct: 640 ETVEETLDFFLRS 652
>gi|406941687|gb|EKD74111.1| hypothetical protein ACD_45C00073G0006 [uncultured bacterium]
Length = 336
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 198/360 (55%), Gaps = 34/360 (9%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH---- 73
+ I ++GA GFIGSHL E IL T + A+D+ DK+ L+ ++ FH
Sbjct: 1 MNILILGANGFIGSHLSEAILANTDWHVYAMDLTQDKLDQCLQDKN--------FHFFLG 52
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+ ++ + E +K D+ + L AI TPA Y PL +F L +++ C E KR
Sbjct: 53 DITVQKEWVTEH-VKKCDVILPLVAIATPAVYVQNPLRVFELDFEANLAIIRQCVEFGKR 111
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
++ ST EVYG + D+ E+ S + G I K+RW YA AKQ+++
Sbjct: 112 IVFPSTSEVYG------MCADNEF---------DEETSCLVNGPIHKERWIYATAKQMLD 156
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R++YA G + L +T+ RPFNW GP++D I P G RVL F N+LR + + LV
Sbjct: 157 RIMYAYGKHHQLAYTLFRPFNWYGPKLD---NIFNPKPGGSRVLTQFIGNILRGENIMLV 213
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
+GG QR F++I D + A+L MIEN A+ IFN+GNP +++R+LAE++ E +
Sbjct: 214 NGGAQQRCFMHIDDGVRALLAMIENKDHAADQQIFNIGNPVENISIRRLAELLVEYIKQY 273
Query: 313 --SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
EAA + +DV+++E+YG GY D R+P ++ ++L W P +L L+ TL Y
Sbjct: 274 PRYAEAANKTQLIDVAAEEYYGAGYQDVALRVPVISRAREKLQWEPTVNLETGLKRTLDY 333
>gi|254252212|ref|ZP_04945530.1| hypothetical protein BDAG_01430 [Burkholderia dolosa AUO158]
gi|124894821|gb|EAY68701.1| hypothetical protein BDAG_01430 [Burkholderia dolosa AUO158]
Length = 377
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 194/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 27 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 80
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 81 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 140
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 141 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 185
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 186 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 241
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IEN A+G I+N+GNP N +VR+LA M E+ A+
Sbjct: 242 DGGSQKRAFTDIDDGISALMKIIENANGVASGKIYNIGNPKNNFSVRELAHKMLELAAEF 301
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A + V+ +S +YG GY D R+P + Q+LGW P+++ D L
Sbjct: 302 PEYADSAKQVQLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQSTFDDALRKIF 359
>gi|336247634|ref|YP_004591344.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter aerogenes KCTC 2190]
gi|334733690|gb|AEG96065.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter aerogenes KCTC 2190]
Length = 661
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 197/377 (52%), Gaps = 40/377 (10%)
Query: 10 LDGRPIKPVT----ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L +P+ V + ++G GFIG+HL E++L + ++I LD+ +D I L+
Sbjct: 304 LSSKPVVAVKRRTRVLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD----- 358
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
R F +I H +E IK D+ + L AI TP +Y PL +F + L ++
Sbjct: 359 -CPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKII 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+ C + NKR+I ST EVYG ED S + G I KQRW
Sbjct: 418 RDCVKYNKRIIFPSTSEVYGMCTDK---------------NFDEDNSNLVVGPINKQRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G +NGL+FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL++GG+ +R F I D IEA+ +IEN R +G I N+GNP NE ++++LAE
Sbjct: 520 VEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAE 579
Query: 304 MMTEVYA------KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
M+ + + A E V S ++YG+GY D + R P + + L W P
Sbjct: 580 MLLACFERHPLRDRFPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPT 635
Query: 358 TSLWDLLESTLTYQHRT 374
+ + +E TL + RT
Sbjct: 636 VEMEETVEHTLDFFLRT 652
>gi|444354256|ref|YP_007390400.1| Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid
decarboxylase (EC 4.1.1.-) / Polymyxin resistance
protein ArnA_FT, UDP-4-amino-4-deoxy-L-arabinose
formylase (EC 2.1.2.-) [Enterobacter aerogenes EA1509E]
gi|443905086|emb|CCG32860.1| Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid
decarboxylase (EC 4.1.1.-) / Polymyxin resistance
protein ArnA_FT, UDP-4-amino-4-deoxy-L-arabinose
formylase (EC 2.1.2.-) [Enterobacter aerogenes EA1509E]
Length = 661
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 129/377 (34%), Positives = 197/377 (52%), Gaps = 40/377 (10%)
Query: 10 LDGRPIKPVT----ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L +P+ V + ++G GFIG+HL E++L + ++I LD+ +D I L+
Sbjct: 304 LSSKPVVAVKRRTRVLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD----- 358
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
R F +I H +E IK D+ + L AI TP +Y PL +F + L ++
Sbjct: 359 -CPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKII 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+ C + NKR+I ST EVYG ED S + G I KQRW
Sbjct: 418 RDCVKYNKRIIFPSTSEVYGMCTDK---------------NFDEDNSNLVVGPINKQRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G +NGL+FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL++GG+ +R F I D IEA+ +IEN R +G I N+GNP NE ++++LAE
Sbjct: 520 VEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAE 579
Query: 304 MMTEVYA------KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
M+ + + A E V S ++YG+GY D + R P + + L W P
Sbjct: 580 MLLACFERHPLRDRFPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPT 635
Query: 358 TSLWDLLESTLTYQHRT 374
+ + +E TL + RT
Sbjct: 636 VEMEETVEHTLDFFLRT 652
>gi|107028959|ref|YP_626054.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia AU 1054]
gi|116689883|ref|YP_835506.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia HI2424]
gi|254248025|ref|ZP_04941346.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
gi|105898123|gb|ABF81081.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia AU
1054]
gi|116647972|gb|ABK08613.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia
HI2424]
gi|124872801|gb|EAY64517.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
Length = 351
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 194/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IEN A+G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIGDGISALMKIIENKGGVASGKIYNIGNPKNNFSVRELAHKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A + V+ +S +YG GY D R+P + Q+LGW P+ + D L +
Sbjct: 276 PEYADSAKQVKLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQATFDDALRNIF 333
>gi|440723547|ref|ZP_20903910.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae BRIP34876]
gi|440728031|ref|ZP_20908254.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae BRIP34881]
gi|440359522|gb|ELP96830.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae BRIP34876]
gi|440362560|gb|ELP99747.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae BRIP34881]
Length = 664
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSINNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
>gi|238919324|ref|YP_002932839.1| Bifunctional polymyxin resistance protein ArnA, putative
[Edwardsiella ictaluri 93-146]
gi|238868893|gb|ACR68604.1| Bifunctional polymyxin resistance protein ArnA, putative
[Edwardsiella ictaluri 93-146]
Length = 659
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/381 (34%), Positives = 200/381 (52%), Gaps = 36/381 (9%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA + L+ + + ++G GFIG+HL E++L E ++I LD+ +D I +
Sbjct: 301 GAILNSSLNFGARRATRVLILGVNGFIGNHLTERLLAEDNYEIYGLDIGSDAISRFI--- 357
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
G R F +I H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 358 ---GHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 414
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+ C + KR+I ST EVYG + DP + ED+S I G I KQ
Sbjct: 415 KIVRDCVKYKKRIIFPSTSEVYG------------MCSDPQF---DEDSSNLIVGPINKQ 459
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A GA++ L FT+ RPFNW+GPR+D ++ G R +
Sbjct: 460 RWIYSVSKQLLDRIIWAYGAKDELRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLI 516
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQ 300
NL+ P+KLVDGG+ +R F IK+ +EA+ +IEN +G I N+GNP NE ++R+
Sbjct: 517 LNLVEGSPIKLVDGGRQKRCFTDIKEGVEALFRIIENKDNLCDGQIINIGNPDNEASIRE 576
Query: 301 LAEMMTEVYA------KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
LAE + + + A E V S +YG+GY D + R P + + LGW
Sbjct: 577 LAEQLLVCFEQHPLRDRFPPFAGFRE----VESSSYYGKGYQDVEHRKPSIRNAQRLLGW 632
Query: 355 NPKTSLWDLLESTLTYQHRTY 375
P + +E TL + +T+
Sbjct: 633 QPVIPMESTIEDTLDFFLQTF 653
>gi|419765062|ref|ZP_14291301.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397742190|gb|EJK89409.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 661
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 192/363 (52%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDNSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPTVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|170733222|ref|YP_001765169.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia MC0-3]
gi|206560298|ref|YP_002231062.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
cenocepacia J2315]
gi|421866931|ref|ZP_16298593.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Burkholderia cenocepacia H111]
gi|444357289|ref|ZP_21158833.1| RmlD substrate binding domain protein [Burkholderia cenocepacia
BC7]
gi|444365762|ref|ZP_21165878.1| RmlD substrate binding domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|169816464|gb|ACA91047.1| NAD-dependent epimerase/dehydratase [Burkholderia cenocepacia
MC0-3]
gi|198036339|emb|CAR52235.1| UDP-glucuronic acid decarboxylase [Burkholderia cenocepacia J2315]
gi|358073095|emb|CCE49471.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Burkholderia cenocepacia H111]
gi|443605684|gb|ELT73521.1| RmlD substrate binding domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443606497|gb|ELT74276.1| RmlD substrate binding domain protein [Burkholderia cenocepacia
BC7]
Length = 351
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/358 (36%), Positives = 194/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IEN A+G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIGDGISALMKIIENKDGVASGKIYNIGNPKNNFSVRELAHKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A + V+ +S +YG GY D R+P + Q+LGW P+ + D L +
Sbjct: 276 PEYADSAKQVKLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQATFDDALRNIF 333
>gi|238753668|ref|ZP_04615030.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia ruckeri ATCC 29473]
gi|238708220|gb|EEQ00576.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia ruckeri ATCC 29473]
Length = 667
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 195/361 (54%), Gaps = 32/361 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D + ++ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDDGYEVYGLDIGSDALGRFID------NPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLKVFELDFEENLKIVRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+
Sbjct: 477 YGEKEGLKFTLFRPFNWMGPRLD---NLDSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN R +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 534 KRCFTDINDGIEALFRVIENRDGRCDGQIINIGNPTNEASIRELAEMLLSSFEQ--HELR 591
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
+ P + S+ +YG+GY D + R P + + L W PK ++ + TL + R
Sbjct: 592 DQFPPFAGMKSIESRAYYGKGYQDVEHRTPSIENARRLLDWQPKIAMQQTVTETLDFFLR 651
Query: 374 T 374
+
Sbjct: 652 S 652
>gi|188534508|ref|YP_001908305.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Erwinia tasmaniensis Et1/99]
gi|226723716|sp|B2VBI9.1|ARNA_ERWT9 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|188029550|emb|CAO97427.1| Bifunctional polymyxin resistance arnA protein (Polymyxin
resistance protein pmrI) [Includes: UDP-glucuronic acid
decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
(ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
formyltransferase (EC 2.1.2.-) (UDP-L- [Erwinia
tasmaniensis Et1/99]
Length = 660
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 192/360 (53%), Gaps = 38/360 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L++ ++ LD+ +D I + G +R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLVDDNFEVFGLDIGSDAIGRFI------GHERFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T SF ED+S + G I KQRW Y+ +KQL++R+I+
Sbjct: 432 TSEVYGMCTDASF----------------DEDSSNLVVGPINKQRWIYSVSKQLLDRVIW 475
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 476 AYGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGR 532
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYA------ 310
+R F I D IEA+ L+IEN + +G I N+GNP NE +++QLAE + E +
Sbjct: 533 QKRCFTDIHDGIEALFLIIENKQKNCDGQIINIGNPENEASIKQLAEQLLESFERHPLRD 592
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ A E V S +YG+GY D + R P + Q L W P ++ ++ TL +
Sbjct: 593 RFPPFAGFRE----VESSTYYGKGYQDVEHRKPSIRNAKQLLNWQPTIAMDKTIDDTLDF 648
>gi|440745634|ref|ZP_20924924.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae BRIP39023]
gi|440372267|gb|ELQ09075.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae BRIP39023]
Length = 664
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R I+ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQLLDKAQRRSIRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDERCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
>gi|17546038|ref|NP_519440.1| NAD-dependent epimerase/dehydratase [Ralstonia solanacearum
GMI1000]
gi|17428333|emb|CAD15021.1| probable uridine 4''-ketopentose synthase oxidoreductase protein
[Ralstonia solanacearum GMI1000]
gi|255710031|gb|ACU30840.1| UDP-4-keto-xylose/UDP-xylose synthase [Ralstonia solanacearum
GMI1000]
gi|299067374|emb|CBJ38573.1| UDP-glucuronic acid decarboxylase (UDP-GlcUA decarboxylase)
[Ralstonia solanacearum CMR15]
Length = 351
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 197/375 (52%), Gaps = 48/375 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY-------------NDKIKHLLEPESQTG 66
+ ++G GFIG HL ++IL T +I +VY N H E +
Sbjct: 4 VLILGVNGFIGHHLSKRILESTDPEISQWEVYGMDMQTERLGDLVNHPRMHFFEGDITIN 63
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
+ +++H ++ D+ + L AI TP+ Y PL +F LP+V+
Sbjct: 64 KEWVEYH-------------VRKCDVILPLVAIATPSTYVKAPLRVFELDFEANLPIVRS 110
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
++ K L+ ST EVYG + D DP +ASP ++G I K RW YA
Sbjct: 111 AAKYGKHLVFPSTSEVYG------MCGDDEF--DP-------EASPLVYGPINKPRWIYA 155
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
C+KQL++R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R
Sbjct: 156 CSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLD---SIHTPKEGSSRVVTQFLGHIVR 211
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMM 305
+ ++LVDGGQ +R F Y+ D I+A++ +I N A+G I+N+GNP N +VR+LAEMM
Sbjct: 212 GENIQLVDGGQQKRAFTYVDDGIDALVRIIANKDGVASGKIYNIGNPSNNYSVRELAEMM 271
Query: 306 TEVYAKVS--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
+ ++ E A + V+ +S +YG+GY D R+P + ++LGW P T++ D
Sbjct: 272 LKKAGTIAEYKENAQKVKLVETTSGAYYGKGYQDVQNRVPKIANTMEELGWKPTTTMEDT 331
Query: 364 LESTLTYQHRTYAEA 378
L + AEA
Sbjct: 332 LANIFEAYREHAAEA 346
>gi|422641769|ref|ZP_16705191.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae Cit 7]
gi|330954155|gb|EGH54415.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae Cit 7]
Length = 664
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R I+ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQLLDKAQRRSIRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDERCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
>gi|365834265|ref|ZP_09375711.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Hafnia
alvei ATCC 51873]
gi|364569042|gb|EHM46665.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Hafnia
alvei ATCC 51873]
Length = 660
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 198/377 (52%), Gaps = 30/377 (7%)
Query: 4 ASVRL-DLDGRPIKPVT-ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP 61
A VRL D IK T + ++G GFIG+HL E++L + + I LD+ +D I+ +
Sbjct: 300 AKVRLWDKPNSLIKRRTRVLILGVNGFIGNHLTERLLQDDNYDIYGLDIGSDAIERFI-- 357
Query: 62 ESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
G R F +I H+ +E IK D+ + L AI TP +Y PL +F
Sbjct: 358 ----GNPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLKVFELDFEQN 413
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
L +V+ C + KR++ ST EVYG + D + ED S I G I K
Sbjct: 414 LKIVRDCVKYQKRIVFPSTSEVYG------------MCNDKDF---DEDTSNLIVGPINK 458
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRW Y+ +KQL++R+I+A GA+N L FT+ RPFNW+GPR+D ++ G R +
Sbjct: 459 QRWIYSVSKQLLDRVIWAYGAKNELNFTLFRPFNWMGPRLD---NLNAARIGSSRAITQL 515
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVR 299
NL+ P+KLVDGG +R F I D IEA+ +IEN NG I N+GNP NE ++R
Sbjct: 516 ILNLVEGSPIKLVDGGAQKRCFTDISDGIEALFRIIENKDDNCNGQIINIGNPDNEASIR 575
Query: 300 QLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
+L EM+ + + + + ++ S +YG+GY D + R P ++ + L W P
Sbjct: 576 ELGEMLLDCFERHPLRSHFPPFAGFKEIESSSYYGKGYQDVEHRKPSISNAKRLLHWEPT 635
Query: 358 TSLWDLLESTLTYQHRT 374
+ +E TL Y RT
Sbjct: 636 VEMKQTVEETLDYFLRT 652
>gi|422672426|ref|ZP_16731790.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330970164|gb|EGH70230.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 664
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
>gi|423122566|ref|ZP_17110250.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5246]
gi|376392383|gb|EHT05048.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5246]
Length = 661
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 191/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLADDNYEIYGLDIGSDAIGRFL------GNPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G ++GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKSGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRNN 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
DV S ++YG+GY D + R P + + L W P + + +E TL + RT
Sbjct: 594 FPPFAGFRDVESSDYYGKGYQDVEHRKPSIRNAKRCLNWTPTVPMEETVEHTLDFFLRT 652
>gi|443643774|ref|ZP_21127624.1| Polymyxin resistance protein ArnA [Pseudomonas syringae pv.
syringae B64]
gi|443283791|gb|ELS42796.1| Polymyxin resistance protein ArnA [Pseudomonas syringae pv.
syringae B64]
Length = 664
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
>gi|449050652|ref|ZP_21731713.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae hvKP1]
gi|448876500|gb|EMB11489.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae hvKP1]
Length = 661
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 193/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKYGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|317491942|ref|ZP_07950376.1| NAD dependent epimerase/dehydratase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920063|gb|EFV41388.1| NAD dependent epimerase/dehydratase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 660
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 198/377 (52%), Gaps = 30/377 (7%)
Query: 4 ASVRL-DLDGRPIKPVT-ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP 61
A VRL D IK T + ++G GFIG+HL E++L + + I LD+ +D I+ +
Sbjct: 300 AKVRLWDKPNSLIKRRTRVLILGVNGFIGNHLTERLLQDDNYDIYGLDIGSDAIERFI-- 357
Query: 62 ESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDA 120
G R F +I H+ +E IK D+ + L AI TP +Y PL +F
Sbjct: 358 ----GNPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLKVFELDFEQN 413
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK 180
L +V+ C + KR++ ST EVYG + D + ED S I G I K
Sbjct: 414 LKIVRDCVKYQKRIVFPSTSEVYG------------MCNDKDF---DEDTSNLIVGPINK 458
Query: 181 QRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACF 240
QRW Y+ +KQL++R+I+A GA+N L FT+ RPFNW+GPR+D ++ G R +
Sbjct: 459 QRWIYSVSKQLLDRVIWAYGAKNELNFTLFRPFNWMGPRLD---NLNAARIGSSRAITQL 515
Query: 241 SNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVR 299
NL+ P+KLVDGG +R F I D IEA+ +IEN NG I N+GNP NE ++R
Sbjct: 516 ILNLVEGSPIKLVDGGAQKRCFTDISDGIEALFRIIENKDDNCNGQIINIGNPDNEASIR 575
Query: 300 QLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
+L EM+ + + + + ++ S +YG+GY D + R P ++ + L W P
Sbjct: 576 ELGEMLLDCFERHPLRSHFPPFAGFKEIESSSYYGKGYQDVEHRKPSISNAKRLLHWEPT 635
Query: 358 TSLWDLLESTLTYQHRT 374
+ +E TL Y RT
Sbjct: 636 VEMKQTVEETLDYFLRT 652
>gi|440230663|ref|YP_007344456.1| methionyl-tRNA formyltransferase [Serratia marcescens FGI94]
gi|440052368|gb|AGB82271.1| methionyl-tRNA formyltransferase [Serratia marcescens FGI94]
Length = 660
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 132/375 (35%), Positives = 195/375 (52%), Gaps = 44/375 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLREDRYEIYGLDIGSDAISRFLD------NPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDRSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D +EA+ +IEN +G I N+GNP NE ++R+LAEM+ +
Sbjct: 534 KRCFTDINDGVEALYRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLASFN------- 586
Query: 318 LEEPTVD----------VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+ P D V S +YG+GY D + R P + + L W P ++ + T
Sbjct: 587 -DHPLRDRFPPFAGFKNVESSSYYGQGYQDVEHRKPSIRNARRLLDWQPTIAMQQTVAET 645
Query: 368 LTYQHRTYAEAIKQA 382
L Y RT + ++A
Sbjct: 646 LDYFLRTTVQESEEA 660
>gi|394987635|ref|ZP_10380474.1| NAD-dependent epimerase/dehydratase familyprotein [Sulfuricella
denitrificans skB26]
gi|393792854|dbj|GAB70113.1| NAD-dependent epimerase/dehydratase familyprotein [Sulfuricella
denitrificans skB26]
Length = 347
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 199/365 (54%), Gaps = 28/365 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+Y++++ L++ R F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVYGMDMYSERVTELMD------NPRFNFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y PL +F LP+V+ C + K LI S
Sbjct: 58 NKEWIEYHVKKCDVILPLVAIATPATYVKEPLKVFELDFEANLPIVRQCVQYGKHLIFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + +D DP + S I G I K RW Y+C+KQL++R+I+A
Sbjct: 118 TSEVYG------MCRDEEF--DP-------ENSELILGPINKPRWIYSCSKQLMDRVIFA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+ FT+ RPFNWIG +D I+ EG RV+ F +++R + +KLVDGG +
Sbjct: 163 YAMKTEFNFTLFRPFNWIGAGLD---NINTAKEGSSRVITQFLGHIVRGEDIKLVDGGTA 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV--SGE 315
+R++ Y D I+A++ +IEN A G I+N+GNP N +V++LA+MM ++ + E
Sbjct: 220 KRSYTYASDGIDALMKIIENKNGVATGQIYNIGNPSNNYSVKELAKMMLDLAMEYPEYAE 279
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
A + T++V+S ++YG+GY D R+P + LGW P ++ D L+
Sbjct: 280 TAKKVNTLEVTSADYYGKGYQDVQNRVPKIDNTMNDLGWKPSVTMADALKHIYEAYRGQV 339
Query: 376 AEAIK 380
AEA K
Sbjct: 340 AEARK 344
>gi|422617060|ref|ZP_16685764.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Pseudomonas syringae pv.
japonica str. M301072]
gi|330897444|gb|EGH28863.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Pseudomonas syringae pv.
japonica str. M301072]
Length = 561
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 200 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 259
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 260 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 306
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 307 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 351
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 352 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLDR---LDSARIG 407
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 408 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGN 467
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 468 PDNEASIRQLGEELLHQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAK 527
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 528 KLIGWTPGIELSETIGKTLDF 548
>gi|66045927|ref|YP_235768.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. syringae
B728a]
gi|75501934|sp|Q4ZSZ2.1|ARNA_PSEU2 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|63256634|gb|AAY37730.1| Formyl transferase, N-terminal:Formyl transferase, C-terminal
[Pseudomonas syringae pv. syringae B728a]
Length = 664
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQMLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
>gi|354725616|ref|ZP_09039831.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter mori LMG 25706]
Length = 660
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLKDDNYEIYGLDIGSDAIGRFL------GNPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDKNF---DEDTSSLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + + + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCNGEIINIGNPDNEASIRELAEMLLASFERHPLRSQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + L W P + ++ TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPTVKMEQTIDETLDFFLRT 652
>gi|424072274|ref|ZP_17809695.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
gi|407997928|gb|EKG38357.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. avellanae
str. ISPaVe037]
Length = 664
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 199/381 (52%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
+ G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LVVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
>gi|423110790|ref|ZP_17098485.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5243]
gi|376378311|gb|EHS91072.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5243]
Length = 661
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 194/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + EDAS + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDASNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWVPTVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|206580101|ref|YP_002236150.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae 342]
gi|288933140|ref|YP_003437199.1| NAD-dependent epimerase/dehydratase [Klebsiella variicola At-22]
gi|290511942|ref|ZP_06551310.1| UDP-GlcUA decarboxylase/UDP-L-Ara4N formyltransferase [Klebsiella
sp. 1_1_55]
gi|226723718|sp|B5XTK9.1|ARNA_KLEP3 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|206569159|gb|ACI10935.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella pneumoniae 342]
gi|288887869|gb|ADC56187.1| NAD-dependent epimerase/dehydratase [Klebsiella variicola At-22]
gi|289775732|gb|EFD83732.1| UDP-GlcUA decarboxylase/UDP-L-Ara4N formyltransferase [Klebsiella
sp. 1_1_55]
Length = 661
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 192/363 (52%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I LE + R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLE------SPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + L+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKYDLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|311277580|ref|YP_003939811.1| NAD-dependent epimerase/dehydratase [Enterobacter cloacae SCF1]
gi|308746775|gb|ADO46527.1| NAD-dependent epimerase/dehydratase [Enterobacter cloacae SCF1]
Length = 660
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 197/374 (52%), Gaps = 34/374 (9%)
Query: 10 LDGRPIKPVT----ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L RP V + ++G GFIG+HL E++L + ++I LD+ +D I L
Sbjct: 304 LSSRPFVAVKRRTRVLILGVNGFIGNHLTERLLADDNYEIYGLDIGSDAISRFLN----- 358
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ R F +I H +E IK D+ + L AI TP +Y PL +F + L ++
Sbjct: 359 -SPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKII 417
Query: 125 KYCSENNKRLIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRW 183
+ C + NKR+I ST EVYG T SF ED S + G I KQRW
Sbjct: 418 RDCVKYNKRIIFPSTSEVYGMCTDNSF----------------DEDTSNLVVGPINKQRW 461
Query: 184 SYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
Y+ +KQL++R+I+A G + L+FT+ RPFNW+GPR+D ++ G R + N
Sbjct: 462 IYSVSKQLMDRVIWAYGDKADLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILN 518
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLA 302
L+ P+KL++GG+ +R F I D IEA+ +IEN R +G I N+GNP NE ++++LA
Sbjct: 519 LVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELA 578
Query: 303 EMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
EM+ E + + + +V S ++YG+GY D + R P + + L W P +
Sbjct: 579 EMLLECFERHPLRNNFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLDWEPTVEM 638
Query: 361 WDLLESTLTYQHRT 374
+E TL + RT
Sbjct: 639 QQTVEETLDFFLRT 652
>gi|83749902|ref|ZP_00946864.1| UDP-glucuronate 4-dehydrogenase (decarboxylating) [Ralstonia
solanacearum UW551]
gi|207743332|ref|YP_002259724.1| uridine 4''-ketopentose synthase protein [Ralstonia solanacearum
IPO1609]
gi|300704306|ref|YP_003745909.1| UDP-glucuronic acid decarboxylase (UDP-glcua decarboxylase)
[Ralstonia solanacearum CFBP2957]
gi|386333701|ref|YP_006029871.1| uridine 4''-ketopentose synthase protein [Ralstonia solanacearum
Po82]
gi|421888416|ref|ZP_16319511.1| UDP-glucuronic acid decarboxylase (UDP-GlcUA decarboxylase)
[Ralstonia solanacearum K60-1]
gi|421897266|ref|ZP_16327634.1| uridine 4''-ketopentose synthase protein [Ralstonia solanacearum
MolK2]
gi|83723424|gb|EAP70640.1| UDP-glucuronate 4-dehydrogenase (decarboxylating) [Ralstonia
solanacearum UW551]
gi|206588472|emb|CAQ35435.1| uridine 4''-ketopentose synthase protein [Ralstonia solanacearum
MolK2]
gi|206594729|emb|CAQ61656.1| uridine 4''-ketopentose synthase protein [Ralstonia solanacearum
IPO1609]
gi|299071970|emb|CBJ43300.1| UDP-glucuronic acid decarboxylase (UDP-GlcUA decarboxylase)
[Ralstonia solanacearum CFBP2957]
gi|334196150|gb|AEG69335.1| uridine 4''-ketopentose synthase protein [Ralstonia solanacearum
Po82]
gi|378966226|emb|CCF96259.1| UDP-glucuronic acid decarboxylase (UDP-GlcUA decarboxylase)
[Ralstonia solanacearum K60-1]
Length = 351
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/375 (34%), Positives = 197/375 (52%), Gaps = 48/375 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY-------------NDKIKHLLEPESQTG 66
+ ++G GFIG HL ++IL T +I +VY N H E +
Sbjct: 4 VLILGVNGFIGHHLSKRILESTDPEISQWEVYGMDMQTERLGDLVNHPRMHFFEGDITIN 63
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
+ +++H ++ D+ + L AI TP+ Y PL +F LP+V+
Sbjct: 64 KEWVEYH-------------VRKCDVILPLVAIATPSTYVKAPLRVFELDFEANLPIVRS 110
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
++ K L+ ST EVYG + D DP +ASP ++G I K RW YA
Sbjct: 111 AAKYGKHLVFPSTSEVYG------MCGDDEF--DP-------EASPLVYGPINKPRWIYA 155
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
C+KQL++R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R
Sbjct: 156 CSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLD---SIHTPKEGSSRVVTQFLGHIVR 211
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMM 305
+ ++LVDGGQ +R F Y+ D I+A++ +I N A+G I+N+GNP N +VR+LA+MM
Sbjct: 212 GENIQLVDGGQQKRAFTYVDDGIDALVRIIANKDGVASGKIYNIGNPSNNYSVRELADMM 271
Query: 306 TEVYAKVS--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
++ ++ E A + V+ +S +YG GY D R+P + ++LGW P T++ D
Sbjct: 272 LKMAGTIAEYKENAQKVKLVETTSGAYYGNGYQDVQNRVPKIANTMEELGWKPTTAMEDT 331
Query: 364 LESTLTYQHRTYAEA 378
L + AEA
Sbjct: 332 LANIFEAYREHAAEA 346
>gi|78066632|ref|YP_369401.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. 383]
gi|77967377|gb|ABB08757.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. 383]
Length = 351
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 194/358 (54%), Gaps = 29/358 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +I+N A+G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIGDGISALMKIIDNKDGVASGKIYNIGNPKNNFSVRELAHKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A + V+ +S +YG GY D R+P + Q+LGW P+ + D L +
Sbjct: 276 PEYADSAKQVKLVETTSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQATFDDALRNIF 333
>gi|238765310|ref|ZP_04626237.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia kristensenii ATCC 33638]
gi|238696483|gb|EEP89273.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia kristensenii ATCC 33638]
Length = 628
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 201/379 (53%), Gaps = 38/379 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 274 VLILGVNGFIGNHLTERLLRDDRYEVYGLDIGSDAISRFL------GNPNFHFVEGDISI 327
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 328 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 387
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 388 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 432
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+
Sbjct: 433 YGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQ 489
Query: 259 QRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMT------EVYAK 311
+R F I D IEA+ +IEN A +G I N+GNP NE ++R+LAEM+ E+ K
Sbjct: 490 KRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLSSFEQHELRDK 549
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A + D+ S +YG+GY D + R P + + L W P+ +L + TL +
Sbjct: 550 FPPFAGFK----DIESSAYYGKGYQDVEHRTPSIRNARRILQWQPEITLQQTVTETLDFF 605
Query: 372 HRTYAEAIKQAVAKPVASS 390
R I+Q+V + +S
Sbjct: 606 LR--GVVIEQSVNEQNQTS 622
>gi|170767415|ref|ZP_02901868.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia albertii TW07627]
gi|170123749|gb|EDS92680.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia albertii TW07627]
Length = 660
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 189/360 (52%), Gaps = 30/360 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN------HPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 477 YGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 534 KRCFTDIRDGIEALFRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLRHH 593
Query: 318 LEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V S +YG+GY D + R P + + LGW PK + + ++ TL + RT
Sbjct: 594 F-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLGWEPKIDMQETIDETLDFFLRT 652
>gi|283832310|ref|ZP_06352051.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Citrobacter youngae ATCC 29220]
gi|291071955|gb|EFE10064.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Citrobacter youngae ATCC 29220]
Length = 660
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQEDNYEVYGLDIGSDAIGRFLQ------HPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 372 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYRKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG V ED+S I G + K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------VFDEDSSNLIVGPVNKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I+D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + K +
Sbjct: 534 KRCFTDIRDGIEALYRIIENEGGRCDGEIINIGNPDNEASIQELAEMLLTCFEKHPLRNH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P++ + L W P + + +E TL + R+
Sbjct: 594 FPPFAGFRNVESSTYYGKGYQDVEHRKPNIRNAKRCLNWEPTIEMQETVEETLDFFLRS 652
>gi|71736629|ref|YP_274991.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|83287937|sp|Q48HZ1.1|ARNA_PSE14 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|71557182|gb|AAZ36393.1| UDP-D-glucuronate dehydrogenase [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 663
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 193/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L + + I +D+ +D I+ H +E +
Sbjct: 314 RPARRTRVLILGVNGFIGNHLSERLLQDDRYDIYGMDIGSDAIERLRTKPNFHFIEGDIS 373
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 374 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 420
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ ED S I G I KQRW
Sbjct: 421 RYCVKYNKRVIFPSTSEVYG------------MCQDASF---NEDTSNLIVGPINKQRWI 465
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 466 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHL 521
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN NG I N+GNP NE ++RQL E
Sbjct: 522 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRDGCCNGQIINIGNPDNEASIRQLGE 581
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q +GW P L
Sbjct: 582 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIGWTPGIELS 641
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 642 ETIGKTLDF 650
>gi|399020800|ref|ZP_10722924.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum sp. CF444]
gi|398093766|gb|EJL84140.1| nucleoside-diphosphate-sugar epimerase [Herbaspirillum sp. CF444]
Length = 351
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 196/363 (53%), Gaps = 24/363 (6%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ D+I +LE E+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMMTDRITDILENEAYKS--RMHFFEGDITI 61
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y +PL +F LP+V+ ++ K L+ S
Sbjct: 62 NKEWVEYHVKKCDVILPLVAIATPSTYVNKPLRVFELDFEANLPIVRAAAKYGKHLVFPS 121
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + + S I G I K RW Y+C+KQL++R+I+
Sbjct: 122 TSEVYG------------MCHDDEF---DSEESELICGPINKPRWIYSCSKQLMDRVIWG 166
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E+ L FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGGQ
Sbjct: 167 YGMEDNLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGGQQ 223
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV--SGE 315
+R F YI D I+A++ +I N A G I+N+GNP N +++ LA MM ++ A+ +
Sbjct: 224 KRAFTYIDDGIDALMKIIANEGGVATGKIYNIGNPTNNYSIKDLAGMMLKLAAEYPEYAD 283
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+A + V+ +S +YG+GY D R+P +T ++L W P ++ D L +
Sbjct: 284 SAKQVKLVETTSAAYYGKGYQDVQNRVPKITNTCEELNWKPTFTMADTLRNIFDAYRGQV 343
Query: 376 AEA 378
AEA
Sbjct: 344 AEA 346
>gi|348618940|ref|ZP_08885421.1| UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming)
(NAD-dependent epimerase/dehydratase) [Candidatus
Glomeribacter gigasporarum BEG34]
gi|347815773|emb|CCD30271.1| UDP-D-glucuronate carboxy-lyase (UDP-D-xylose-forming)
(NAD-dependent epimerase/dehydratase) [Candidatus
Glomeribacter gigasporarum BEG34]
Length = 358
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/353 (35%), Positives = 187/353 (52%), Gaps = 44/353 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
I ++G GFIG HL ++IL ++ +D+ D++ H E + + ++
Sbjct: 15 ILILGVNGFIGHHLSKRILETADWEVFGMDMLTDRLSDEIRHPRMHFFEGDITINKEWVE 74
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H I+ D+ + L AI TPA Y T+PL +F LP+V+ +
Sbjct: 75 YH-------------IRKCDVILPLVAIATPATYVTQPLRVFELDFEANLPIVRSAVKYR 121
Query: 132 KRLIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
K L+ ST EVYG T F P+ S L I+G I K RW YA +KQ
Sbjct: 122 KHLVFPSTSEVYGMCTDDEFDPQTSNL----------------IYGPISKPRWIYAASKQ 165
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
L++R+I+ G + GL FT+ RPFNWIGP +D I+ P EG RV++ F ++R +P+
Sbjct: 166 LMDRVIWGYGMQEGLNFTLFRPFNWIGPGLD---SINTPKEGSSRVVSQFLGQIVRGEPI 222
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
LVDGG +R F I D I+A++ +IENP A+G I+N+GNP NE +VR+LA M +
Sbjct: 223 HLVDGGYQKRAFTDIDDGIDALMRIIENPNGIASGKIYNIGNPENECSVRELARTMLALA 282
Query: 310 AKVSGEA--ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
++ A A + V+ SS +YG GY D R P + +LGWNP+ +
Sbjct: 283 SEFPEYAPRARQVRLVETSSGAYYGGGYQDMQARAPKIDNTRTELGWNPQMDM 335
>gi|373487022|ref|ZP_09577692.1| NAD-dependent epimerase/dehydratase [Holophaga foetida DSM 6591]
gi|372010489|gb|EHP11096.1| NAD-dependent epimerase/dehydratase [Holophaga foetida DSM 6591]
Length = 350
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/378 (32%), Positives = 210/378 (55%), Gaps = 46/378 (12%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADR 69
+ I ++G GFIGSHL ++IL +T +I +D+ + K+ H +E + +
Sbjct: 1 MKILILGVNGFIGSHLTDRILRDTSWEIYGMDLGSHKVAEHLDNPRFHFVEGDISISKEW 60
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
I++H +K D+ + L AI TP Y T PL +F + L +++ C +
Sbjct: 61 IEYH-------------VKKCDVVLPLVAIATPKVYVTDPLRVFELDFEENLRIIRQCVK 107
Query: 130 NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
KR++ ST EVYG + +DS E+ SP + G + RW Y+ +K
Sbjct: 108 YKKRVVFPSTSEVYG------MCEDSEF---------DEENSPLVTGPVPMNRWIYSTSK 152
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
QL++R+I+A G + GL FT+ RPFN++GP++D ++ EG R++ F+ NL +P
Sbjct: 153 QLLDRVIWAYGFQQGLAFTLFRPFNFMGPKLD---SLNTAKEGSSRLVTQFAWNLFNGEP 209
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
L LVDGG + R F I+DA++ ++ +I N +A+G IFN+GNP N+ +VR++AEMM E+
Sbjct: 210 LNLVDGGVAHRCFCDIEDALDGLMAIIGNEGGKADGKIFNIGNPGNDASVREIAEMMIEI 269
Query: 309 YAK--VSGEAALEEPT-VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
+ + E + E + V+ SS +FYG+GY D +R P + + + G++PK + + L
Sbjct: 270 WKEHPFRKERGIAEGSVVETSSGDFYGKGYQDVMRRTPSIKRLQETFGYSPKIGIQESLR 329
Query: 366 STLTY---QHRTYAEAIK 380
T+ + +H+ + ++
Sbjct: 330 RTIDFFIEEHKALEKVVE 347
>gi|308271088|emb|CBX27698.1| Bifunctional polymyxin resistance protein arnA [uncultured
Desulfobacterium sp.]
Length = 663
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/359 (35%), Positives = 195/359 (54%), Gaps = 34/359 (9%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH----R 74
T+ ++G GFIG+HL E++L +++ +D+ I LLE R FH
Sbjct: 319 TVLILGVNGFIGNHLSERLLDSGRYEVYGMDLSTSAINRLLE--------RPGFHFKEGD 370
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+ I H+ +E ++ D+ + L AI TP +Y PL +F + L +V+YC + K+L
Sbjct: 371 IGIMHEW-IEYHVRKCDIILPLVAIATPIEYVRNPLRVFELDFEENLRIVRYCVKYKKKL 429
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
I ST EVYG + DS + + +VL G I KQRW Y+C KQ+++R
Sbjct: 430 IFPSTSEVYG------MCTDSEFDEQRSNFVL---------GPIHKQRWIYSCGKQMLDR 474
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+I+A GA NGL FT++RPFNW+GPR+D + G RV+ F NL+ +P++LVD
Sbjct: 475 VIWAYGATNGLNFTLIRPFNWLGPRLDTLA---SARIGSSRVITQFILNLVEGRPIRLVD 531
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK-- 311
GG +R F +KD I+ + +IE+ +NG IFN+GNP NE ++ +LAE++ E ++
Sbjct: 532 GGCQKRCFTDVKDGIDCLFKIIEDKNNNSNGRIFNIGNPDNEKSMAELAEILIEKFSAHP 591
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ + ++ FYGEGY D + R P + LGW P S +E TL +
Sbjct: 592 LRKHFPPLAGIRRIEARSFYGEGYQDVEHRRPSIRQAKTLLGWEPVVSFAQSVEETLDF 650
>gi|269138646|ref|YP_003295347.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Edwardsiella tarda EIB202]
gi|387867344|ref|YP_005698813.1| Polymyxin resistance protein ArnA-DH, UDP-glucuronic acid
decarboxylase [Edwardsiella tarda FL6-60]
gi|267984307|gb|ACY84136.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Edwardsiella tarda EIB202]
gi|304558657|gb|ADM41321.1| Polymyxin resistance protein ArnA-DH, UDP-glucuronic acid
decarboxylase [Edwardsiella tarda FL6-60]
Length = 659
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 200/381 (52%), Gaps = 36/381 (9%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA + L+ + + ++G GFIG+HL E++L E +++ LD+ +D I ++
Sbjct: 301 GAILNSSLNFGARRATRVLILGVNGFIGNHLTERLLAEDNYEVYGLDIGSDAISRFID-- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
R F +I H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 359 ----HPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 414
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+ C + KR+I ST EVYG + DP + ED+S I G I KQ
Sbjct: 415 KIVRDCVKYKKRIIFPSTSEVYG------------MCSDPQF---DEDSSNLIVGPINKQ 459
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A GA++ L FT+ RPFNW+GPR+D ++ G R +
Sbjct: 460 RWIYSVSKQLLDRIIWAYGAKDELRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLI 516
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQ 300
NL+ P+KLVDGG+ +R F IK+ +EA+ +IEN +G I N+GNP NE ++R+
Sbjct: 517 LNLVEGSPIKLVDGGRQKRCFTDIKEGVEALFRIIENKDNLCDGQIINIGNPDNEASIRE 576
Query: 301 LAEMMTEVYA------KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
LAE + + + A E V S +YG+GY D + R P + + LGW
Sbjct: 577 LAEQLLVCFEQHPLRDRFPPFAGFRE----VESSSYYGKGYQDVEHRKPSIRNAQRLLGW 632
Query: 355 NPKTSLWDLLESTLTYQHRTY 375
P + +E TL + +T+
Sbjct: 633 QPVIPMESTIEDTLDFFLQTF 653
>gi|291613841|ref|YP_003523998.1| NAD-dependent epimerase/dehydratase [Sideroxydans lithotrophicus
ES-1]
gi|291583953|gb|ADE11611.1| NAD-dependent epimerase/dehydratase [Sideroxydans lithotrophicus
ES-1]
Length = 347
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/363 (35%), Positives = 194/363 (53%), Gaps = 28/363 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL +IL T ++ +D+ D+I L+ G R F +I
Sbjct: 4 VLILGVNGFIGHHLSNRILATTDWEVYGMDMSTDRISDLI------GKPRFHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ C + NK L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRACVKYNKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D DP D S I G I K RW Y+ +KQL++R+I+
Sbjct: 118 TSEVYG------MCHDEEF--DP-------DNSELICGPINKPRWIYSNSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G ++ L FT+ RPFNWIG +D I+ P EG RV+ F +++R + LVDGG
Sbjct: 163 YGMQDNLNFTLFRPFNWIGAGLD---SINTPKEGSSRVVTQFLGHIIRGNNISLVDGGHQ 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
+R F YI D I+A++ +I+N A G I+N+GNP N ++R LA+MM ++ + +
Sbjct: 220 KRAFTYIDDGIDALMKIIDNKNGIATGKIYNIGNPSNNHSIRDLADMMLKLANEYPEYKD 279
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+A V+ +S +YG+GY D R+P +T ++LGW P T++ D L
Sbjct: 280 SAKNVKIVETTSDAYYGKGYQDVQNRVPKITNTCEELGWKPTTTMPDTLRKIYDAYRTQI 339
Query: 376 AEA 378
AEA
Sbjct: 340 AEA 342
>gi|284006258|emb|CBA71494.1| bifunctional polymyxin resistance protein [Arsenophonus nasoniae]
Length = 653
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 193/368 (52%), Gaps = 30/368 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I LD+ + + + R F +I
Sbjct: 305 VLILGVNGFIGNHLTERLLADGHYDIYGLDISSSAVSRFINDPRFGDDQRFHFVEGDISI 364
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 365 HTEWIEYHIKKCDIILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 424
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 425 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLDRVIWA 469
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D + G R + NL+ P+KLVDGG
Sbjct: 470 YGAKEGLKFTLFRPFNWMGPRLD---SLHSARIGSSRAITQLILNLVEGSPIKLVDGGAQ 526
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK------ 311
+R F IKD IEA+ +IEN + +G I N+GNP NE ++ QLA+M+ + K
Sbjct: 527 KRCFTDIKDGIEALFRIIENKDEKCDGQIINIGNPTNEASIAQLADMLLVSFEKHPLRKL 586
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A L++ + S +YG+GY D + R P + + L W P + ++ TL +
Sbjct: 587 FPPFAGLKK----IESSSYYGKGYQDVEHRRPRIENARRLLDWEPTIDMKQTIDETLDFF 642
Query: 372 HRTYAEAI 379
+ AE +
Sbjct: 643 LQAAAEEL 650
>gi|397162993|ref|ZP_10486458.1| bifunctional polymyxin resistance protein ArnA [Enterobacter
radicincitans DSM 16656]
gi|396095140|gb|EJI92685.1| bifunctional polymyxin resistance protein ArnA [Enterobacter
radicincitans DSM 16656]
Length = 659
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 199/377 (52%), Gaps = 40/377 (10%)
Query: 10 LDGRPIKPVT----ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L +P+ V + ++G GFIG+HL E++L + ++I LD+ +D I L
Sbjct: 304 LTSKPVVAVKRRTRVLILGVNGFIGNHLTERLLRDDNYEIYGLDIGSDAISRFL------ 357
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
G+ R F +I H +E IK D+ + L AI TP +Y PL +F + L ++
Sbjct: 358 GSPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKII 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+ C + NKR+I ST EVYG + D + ED S + G I KQRW
Sbjct: 418 RDCVKYNKRIIFPSTSEVYG------------MCTDKNF---DEDNSNLVVGPINKQRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G ++GL+FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVIWAYGDKHGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL++GG+ +R F I D IEA+ +IEN R +G I N+GNP NE ++++LAE
Sbjct: 520 VEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGEIINIGNPDNEASIKELAE 579
Query: 304 MMTEVYAK------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPK 357
M+ + K A E V S +YG+GY D + R P + + L W P
Sbjct: 580 MLLASFEKHPLRDRFPPFAGFRE----VESSSYYGKGYQDVEHRKPSIRNAKRCLHWEPT 635
Query: 358 TSLWDLLESTLTYQHRT 374
+ ++ TL + RT
Sbjct: 636 VDMRQTIDETLDFFLRT 652
>gi|167586999|ref|ZP_02379387.1| NAD-dependent epimerase/dehydratase [Burkholderia ubonensis Bu]
Length = 351
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/350 (36%), Positives = 192/350 (54%), Gaps = 29/350 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG + D DP D S +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYG------MCADEQF--DP-------DNSALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IENP A+G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIDDGISALMKIIENPNGVASGKIYNIGNPKNNFSVRELAHKMLELAAEF 275
Query: 313 S--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
++A V+ +S +YG+GY D R+P + Q+LGW P+++
Sbjct: 276 PEYADSAKNVNLVETTSGAYYGKGYQDVQNRVPKIDNTMQELGWAPQSTF 325
>gi|398925184|ref|ZP_10661729.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM48]
gi|398172381|gb|EJM60247.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM48]
Length = 663
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QDP + ED+S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDPNF---DEDSSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + A D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRANFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWTPTVEMSETIGNTLDF 650
>gi|330861106|emb|CBX71372.1| bifunctional polymyxin resistance protein aRNA [Yersinia
enterocolitica W22703]
Length = 585
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 36/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L D FH +
Sbjct: 226 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAICRFL--------DNPNFHFVEGDI 277
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++
Sbjct: 278 SIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVF 337
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R+I
Sbjct: 338 PSTSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVI 382
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 383 WAYGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGG 439
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I D IEA+ +IEN A +G I N+GNP NE ++R+LAEM+ + K E
Sbjct: 440 EQKRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HE 497
Query: 316 AALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P D+ S +YG+GY D + R P + + L W P+ +L + TL +
Sbjct: 498 LRHNFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILDWQPEIALEQTVMETLDF 556
>gi|398895193|ref|ZP_10647071.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM55]
gi|398181389|gb|EJM68958.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM55]
Length = 663
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QDP + ED+S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDPNF---DEDSSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + A D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRANFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWTPTVEMSETIGNTLDF 650
>gi|262040545|ref|ZP_06013786.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
gi|259042138|gb|EEW43168.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
13884]
Length = 661
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 192/363 (52%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAINRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI P +Y PL +F + L +++ C + NKR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIAAPIEYTRNPLRVFELDFEENLKIIRDCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GP +D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPLLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W PK + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|332161625|ref|YP_004298202.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386308243|ref|YP_006004299.1| polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase; Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Yersinia
enterocolitica subsp. palearctica Y11]
gi|418241722|ref|ZP_12868246.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433549717|ref|ZP_20505761.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Yersinia enterocolitica IP 10393]
gi|318605883|emb|CBY27381.1| polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase; Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665855|gb|ADZ42499.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|351778841|gb|EHB20974.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788852|emb|CCO68801.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Yersinia enterocolitica IP 10393]
Length = 677
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 36/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L D FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAICRFL--------DNPNFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++
Sbjct: 370 SIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 475 WAYGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I D IEA+ +IEN A +G I N+GNP NE ++R+LAEM+ + K E
Sbjct: 532 EQKRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HE 589
Query: 316 AALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P D+ S +YG+GY D + R P + + L W P+ +L + TL +
Sbjct: 590 LRHNFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILDWQPEIALEQTVMETLDF 648
>gi|389682672|ref|ZP_10174011.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
chlororaphis O6]
gi|388553480|gb|EIM16734.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
chlororaphis O6]
Length = 668
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 195/374 (52%), Gaps = 33/374 (8%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+ L
Sbjct: 304 GSLLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDKYEVYGLDIGSDAIERL---- 359
Query: 63 SQTGADRIQFHRLNIK---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFID 119
D FH + H +E IK D+ + L AI TP +Y PL +F +
Sbjct: 360 ----RDHPHFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 415
Query: 120 ALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE 179
L +V+YC + NKR+I ST EVYG + QD + ED S I G I
Sbjct: 416 NLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQNF---DEDTSNLIVGPIN 460
Query: 180 KQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
KQRW Y+ +KQL++R+I+A G++ GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 461 KQRWIYSVSKQLLDRVIWAYGSK-GLNFTLFRPFNWMGPRLD---RLDSARIGSSRAITQ 516
Query: 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTV 298
NL+ P++L DGG+ +R F I D IEA+ +++N NG I N+GNP NE ++
Sbjct: 517 LILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDVCNGQIINIGNPDNEASI 576
Query: 299 RQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNP 356
RQL E + + + G DV SK FYG GY D + R P + + L W P
Sbjct: 577 RQLGEELLRQFEAHPLRGNFPPFAGFRDVESKSFYGAGYQDVEHRKPSIANAKRLLNWEP 636
Query: 357 KTSLWDLLESTLTY 370
+ + +TL +
Sbjct: 637 TVEMKQTIGNTLDF 650
>gi|296105191|ref|YP_003615337.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295059650|gb|ADF64388.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 660
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLKDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDKNF---DEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + + + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCNGEIINIGNPDNEASIRELAEMLLASFERHPLRNQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + L W P + ++ TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPTVKMEQTIDETLDFFLRT 652
>gi|123442451|ref|YP_001006430.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|134035393|sp|A1JPN5.1|ARNA_YERE8 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|122089412|emb|CAL12260.1| probable formyl transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 687
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 36/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L D FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAICRFL--------DNPNFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++
Sbjct: 370 SIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 475 WAYGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I D IEA+ +IEN A +G I N+GNP NE ++R+LAEM+ + K E
Sbjct: 532 EQKRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HE 589
Query: 316 AALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P D+ S +YG+GY D + R P + + L W P+ +L + TL +
Sbjct: 590 LRHNFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILDWQPEIALEQTVMETLDF 648
>gi|378582276|ref|ZP_09830915.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Pantoea
stewartii subsp. stewartii DC283]
gi|377815013|gb|EHT98129.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase [Pantoea
stewartii subsp. stewartii DC283]
Length = 660
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 190/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I + G R QF +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFEVFGLDIGSDAISRFV------GHPRFQFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYGKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG S ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDS---------------NFDEDHSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL DGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLFDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D +EA+ +IEN +G I N+GNP NE ++++LAE + E + + A+
Sbjct: 534 KRCFTDISDGVEALFRIIENKNNNCDGQIINIGNPDNEASIKELAERLLESFERHPLRAS 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + LGW P+ + +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLGWTPEVQMNTTIDNTLDFFLRT 652
>gi|422652077|ref|ZP_16714865.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. actinidiae
str. M302091]
gi|330965148|gb|EGH65408.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 663
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 193/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L + ++I +D+ D I+ H +E +
Sbjct: 314 RPARRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGCDAIERLRTKPNFHFIEGDIS 373
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 374 IHTEWIEYH-------------IKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 420
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ ED S + G I KQRW
Sbjct: 421 RYCVKYNKRVIFPSTSEVYG------------MCQDASF---NEDTSNLVVGPINKQRWI 465
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 466 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHL 521
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E
Sbjct: 522 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRGGRCNGQIINIGNPDNEASIRQLGE 581
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q + W P L
Sbjct: 582 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNARQLIDWTPGIELS 641
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 642 ETIGKTLDF 650
>gi|404401042|ref|ZP_10992626.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fuscovaginae UPB0736]
Length = 663
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 200/379 (52%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDKYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S I
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDKNF---DEDSSNLI 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPISKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +++N + NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDSCNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G +V SK FYG GY D + R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFREVESKAFYGAGYQDVEHRKPSIENAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMSETIGNTLDF 650
>gi|422590615|ref|ZP_16665269.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330877761|gb|EGH11910.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 663
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 193/369 (52%), Gaps = 43/369 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQ 64
RP + + ++G GFIG+HL E++L + ++I +D+ D I+ H +E +
Sbjct: 314 RPARRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGCDAIERLRTKPNFHFIEGDIS 373
Query: 65 TGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
+ I++H IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 374 IHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 420
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + NKR+I ST EVYG + QD ++ ED S + G I KQRW
Sbjct: 421 RYCVKYNKRVIFPSTSEVYG------------MCQDASF---NEDTSNLVVGPINKQRWI 465
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + +L
Sbjct: 466 YSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHL 521
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAE 303
+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GNP NE ++RQL E
Sbjct: 522 VEGTPIRLVDGGAQKRCFTDVADGIEALARIIENRGGRCNGQIINIGNPDNEASIRQLGE 581
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + G +V S+ FYG+GY D R P + Q + W P L
Sbjct: 582 ELLRQFEAHPLRGNFPPFAGFREVESQSFYGKGYQDVSHRKPSIYNARQLIDWTPGIELS 641
Query: 362 DLLESTLTY 370
+ + TL +
Sbjct: 642 ETIGKTLDF 650
>gi|420258392|ref|ZP_14761127.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404514197|gb|EKA27997.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 682
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 192/359 (53%), Gaps = 36/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L D FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAICRFL--------DNPNFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++
Sbjct: 370 SIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 475 WAYGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I D IEA+ +IEN A +G I N+GNP NE ++R+LAEM+ + K E
Sbjct: 532 EQKRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HE 589
Query: 316 AALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P D+ S +YG+GY D + R P + + L W P+ +L + TL +
Sbjct: 590 LRHNFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILDWQPEIALEQTVMETLDF 648
>gi|344171547|emb|CCA84162.1| UDP-glucuronic acid decarboxylase (UDP-GlcUA decarboxylase)
[Ralstonia syzygii R24]
Length = 351
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/375 (34%), Positives = 197/375 (52%), Gaps = 48/375 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY-------------NDKIKHLLEPESQTG 66
+ ++G GFIG HL ++IL T +I +VY N H E +
Sbjct: 4 VLILGVNGFIGHHLSKRILESTDPEISQWEVYGMDMQTERLGDLVNHPRMHFFEGDITIN 63
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
+ +++H ++ D+ + L AI TP+ Y PL +F LP+V+
Sbjct: 64 KEWVEYH-------------VRKCDVILPLVAIATPSTYVKAPLRVFELDFEANLPIVRS 110
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
++ K L+ ST EVYG + D DP +ASP ++G I K RW YA
Sbjct: 111 AAKYGKHLVFPSTSEVYG------MCGDDEF--DP-------EASPLVYGPINKPRWIYA 155
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
C+KQL++R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R
Sbjct: 156 CSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLD---SIHTPKEGSSRVVTQFLGHIVR 211
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMM 305
+ ++LVDGG +R F Y+ D I+A++ +I N A+G I+N+GNP N +VR+LA+MM
Sbjct: 212 GENIQLVDGGHQKRAFTYVDDGIDALVRIIANKDGVASGKIYNIGNPSNNYSVRELADMM 271
Query: 306 TEVYAKVS--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
++ ++ E A + V+ +S +YG+GY D R+P + ++LGW P T++ D
Sbjct: 272 LKMAGTIAEYKENAQKVKLVETTSGAYYGKGYQDVQNRVPKIANTMEELGWKPTTAMEDT 331
Query: 364 LESTLTYQHRTYAEA 378
L + AEA
Sbjct: 332 LANIFEAYREHAAEA 346
>gi|375257820|ref|YP_005016990.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella oxytoca KCTC 1686]
gi|397660441|ref|YP_006501143.1| Polymyxin resistance protein ArnA_DH [Klebsiella oxytoca E718]
gi|365907298|gb|AEX02751.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella oxytoca KCTC 1686]
gi|394343809|gb|AFN29930.1| Polymyxin resistance protein ArnA_DH [Klebsiella oxytoca E718]
Length = 661
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 193/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWVPTVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|392981144|ref|YP_006479732.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392327077|gb|AFM62030.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 660
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 192/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLKDDNYEIYGLDIGSDAISRFLD------CPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDKNF---DEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + + + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCNGEIINIGNPDNEASIRELAEMLLASFERHPLRNQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + L W P + ++ TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPTVKMEQTIDETLDFFLRT 652
>gi|423116789|ref|ZP_17104480.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5245]
gi|376377256|gb|EHS90027.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5245]
Length = 661
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 194/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + EDAS + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDASNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + ++ TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWVPTVEMEETVKHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|300715793|ref|YP_003740596.1| bifunctional polymyxin resistance protein ArnA [Erwinia billingiae
Eb661]
gi|299061629|emb|CAX58744.1| Bifunctional polymyxin resistance protein ArnA [Erwinia billingiae
Eb661]
Length = 662
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 197/373 (52%), Gaps = 32/373 (8%)
Query: 10 LDGRPIKPVT----ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L +P+ V + ++G GFIG+HL E++L + I LD+ +D I +
Sbjct: 304 LTNKPVSAVKRRTRVLILGVNGFIGNHLTERLLQDDNFDIFGLDIGSDAISRFI------ 357
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
G R QF +I H +E IK D+ + L AI TP +Y PL +F + L ++
Sbjct: 358 GHPRFQFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKII 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+ C + KR+I ST EVYG + DP + ED S + G I KQRW
Sbjct: 418 RDCVKYKKRIIFPSTSEVYG------------MCDDPNF---DEDTSNLVVGPINKQRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+++A G + GL FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVLWAYGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL+DGG+ +R F I D +EA+ +IEN +G I N+GNP NE ++++LAE
Sbjct: 520 VEGSPIKLMDGGKQKRCFTDISDGVEALFRIIENKDNNCDGQIINIGNPDNEASIKELAE 579
Query: 304 MMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+ + + + DV S +YG+GY D + R P + + LGW P+ ++
Sbjct: 580 QLLASFERHPLRDRFPPFAGFRDVESSSYYGKGYQDVEHRKPAIRNARRLLGWTPEVTMD 639
Query: 362 DLLESTLTYQHRT 374
+++TL + RT
Sbjct: 640 KTIDATLDFFLRT 652
>gi|70730410|ref|YP_260151.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas protegens Pf-5]
gi|83287938|sp|Q4KC82.1|ARNA_PSEF5 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|68344709|gb|AAY92315.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
protegens Pf-5]
Length = 668
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + + + LD+ +D I+
Sbjct: 304 GSLLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDKYDVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S I
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDKNF---DEDTSNLI 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +++N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDCCNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G DV SK FYG GY D + R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIDNAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMSETIGNTLDF 650
>gi|423105293|ref|ZP_17092995.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5242]
gi|376381057|gb|EHS93797.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5242]
Length = 661
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 193/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWVPTVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|421725780|ref|ZP_16164964.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella oxytoca M5al]
gi|410373459|gb|EKP28156.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella oxytoca M5al]
Length = 661
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 193/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWVPTVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|402566336|ref|YP_006615681.1| NAD-dependent epimerase/dehydratase [Burkholderia cepacia GG4]
gi|402247533|gb|AFQ47987.1| NAD-dependent epimerase/dehydratase [Burkholderia cepacia GG4]
Length = 351
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/354 (36%), Positives = 191/354 (53%), Gaps = 29/354 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGG +R F I D I A++ +IEN A+G I+N+GNP N +VR+LA M E+ A+
Sbjct: 216 DGGSQKRAFTDIDDGISALMKIIENKNGVASGKIYNIGNPKNNFSVRELAHKMLELAAEY 275
Query: 313 SGEAALEEPT--VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
A + V+ +S +YG GY D R+P + Q+L W P+++ D L
Sbjct: 276 PEYAGFAKQVQLVETTSGAYYGNGYQDVQNRVPKIDNTMQELAWAPQSTFDDAL 329
>gi|238757770|ref|ZP_04618953.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia aldovae ATCC 35236]
gi|238704013|gb|EEP96547.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia aldovae ATCC 35236]
Length = 652
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 191/359 (53%), Gaps = 36/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L D FH +
Sbjct: 303 VLILGVNGFIGNHLTERLLRDDRYEVYGLDIGSDAISRFL--------DNPYFHFVEGDI 354
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++
Sbjct: 355 SIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVF 414
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D + ED S I G I KQRW Y+ +KQL++R+I
Sbjct: 415 PSTSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVI 459
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 460 WAYGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVDGSPIKLVDGG 516
Query: 257 QSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + K E
Sbjct: 517 AQKRCFTDIHDGIEALFRIIENRDGCCDGEIINIGNPTNEASIRELAEMLLSSFEK--HE 574
Query: 316 AALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P D+ S +YG+GY D + R P ++ + L W P+ ++ + TL +
Sbjct: 575 LRDHFPPFAGFKDIESSAYYGKGYQDVEYRTPSISNARRILHWQPEIAMQQTVTETLDF 633
>gi|423126214|ref|ZP_17113893.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5250]
gi|376397786|gb|EHT10416.1| bifunctional polymyxin resistance protein ARNA [Klebsiella oxytoca
10-5250]
Length = 661
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 193/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWVPTVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|440286730|ref|YP_007339495.1| methionyl-tRNA formyltransferase [Enterobacteriaceae bacterium
strain FGI 57]
gi|440046252|gb|AGB77310.1| methionyl-tRNA formyltransferase [Enterobacteriaceae bacterium
strain FGI 57]
Length = 661
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 198/373 (53%), Gaps = 32/373 (8%)
Query: 10 LDGRPI----KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L +P+ + + ++G GFIG+HL E++L + ++I LD+ +D I ++
Sbjct: 304 LSSKPVVALKRRTRVLILGVNGFIGNHLTERLLKDDRYEIYGLDIGSDAIGRFMD----- 358
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
R F +I H +E IK D+ + L AI TP +Y PL +F + L +V
Sbjct: 359 -CPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIV 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+ C + NKR++ ST EVYG KD ED S + G I +QRW
Sbjct: 418 RDCVKYNKRIVFPSTSEVYGMCT----DKD-----------FDEDNSNLVVGPINRQRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G ++GL+FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVIWAYGEKSGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL++GG +R F I D IEA+ +IEN R +G I N+GNP NE ++++LAE
Sbjct: 520 VEGSPIKLIEGGSQKRCFTDISDGIEALYRIIENEDNRCDGQIINIGNPDNEASIKELAE 579
Query: 304 MMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
M+ + + + DV S ++YG+GY D + R P + + L W P ++
Sbjct: 580 MLLDCFERHPLRQHFPPFAGFRDVESSDYYGKGYQDVEHRKPSIRNARRCLNWQPGIAMQ 639
Query: 362 DLLESTLTYQHRT 374
+E TL + RT
Sbjct: 640 QTVEETLDFFLRT 652
>gi|398952709|ref|ZP_10674947.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM33]
gi|398154767|gb|EJM43231.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM33]
Length = 663
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIDRLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QDP + ED+S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDPNF---DEDSSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + A D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRANFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWTPTVEMSETIGNTLDF 650
>gi|402844570|ref|ZP_10892923.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella sp. OBRC7]
gi|402273741|gb|EJU22935.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Klebsiella sp. OBRC7]
Length = 661
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 193/363 (53%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+++A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVVWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S ++YG+GY D + R P + + L W P + + +E TL +
Sbjct: 594 FPPFAGFRE----VESSDYYGKGYQDVEHRKPSIRNAKRCLNWVPTVEMEETVEHTLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|406916042|gb|EKD55077.1| hypothetical protein ACD_60C00027G0003 [uncultured bacterium]
Length = 336
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/359 (35%), Positives = 194/359 (54%), Gaps = 32/359 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ I ++G GFIGSHL E IL +T I +D+ DKI L+ E R F + +I
Sbjct: 1 MNILILGVNGFIGSHLSEAILTKTDWHIFGMDIEADKISTCLQHE------RFHFQKGDI 54
Query: 78 K-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ ++ I D+ + L AI TPA Y PL +F L +++ C KR+I
Sbjct: 55 TVQKNWVKEQINHCDVILPLVAIATPAVYVQNPLRVFELDFEANLEIIRECVRQKKRIIF 114
Query: 137 FSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG T G F E+ S + G I K+RW Y+ +KQL++R+
Sbjct: 115 PSTSEVYGMCTDGEF----------------DEEKSHLVTGPIHKERWIYSTSKQLLDRV 158
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
IYA G ++ L++++ RPFNW GP+ D I G RVL F N+LR + + LV+G
Sbjct: 159 IYAYGKQDQLQYSLFRPFNWYGPKQD---NILNSKPGGSRVLTQFIGNILRGEDITLVNG 215
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEV---YAK 311
G QR F++I D + A+L +IEN A G IFN+GNP +++R LAE++ + Y +
Sbjct: 216 GSQQRCFMHIDDGVSALLKIIENKNNCALGRIFNIGNPIENISIRSLAELLVHLIKKYPQ 275
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S +A+ + ++V + ++YG GY D R+P + + LGW PK +L L +TL +
Sbjct: 276 YSDQAS-KTKFINVPADQYYGAGYQDVSLRVPSIVRAEKYLGWTPKINLESGLRNTLDF 333
>gi|345301306|ref|YP_004830664.1| Bifunctional polymyxin resistance protein ArnA [Enterobacter
asburiae LF7a]
gi|345095243|gb|AEN66879.1| Bifunctional polymyxin resistance protein ArnA [Enterobacter
asburiae LF7a]
Length = 660
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLKDDNYEIYGLDIGSDAISRFLT------NPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDK---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + + + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCNGEIINIGNPENEASIRELAEMLLASFERHPLRDQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + L W P+ + ++ TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPEVKMEQTIDETLDFFLRT 652
>gi|167581654|ref|ZP_02374528.1| hypothetical protein BthaT_26154 [Burkholderia thailandensis TXDOH]
gi|167619772|ref|ZP_02388403.1| hypothetical protein BthaB_25937 [Burkholderia thailandensis Bt4]
Length = 341
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 189/346 (54%), Gaps = 29/346 (8%)
Query: 27 GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEG 85
GFIG HL ++IL T ++ +D+ D++ L++ E R+ F +I + +E
Sbjct: 3 GFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFEGDITINKEWVEY 56
Query: 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145
+K D+ + L AI TPA Y +PL +F LP+V+ + K L+ ST EVYG
Sbjct: 57 HVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYKKHLVFPSTSEVYG- 115
Query: 146 TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL 205
+ D DP DAS +G I K RW YAC+KQL++R+I+ G E GL
Sbjct: 116 -----MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMDRVIWGYGME-GL 160
Query: 206 EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYI 265
FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG +R F Y+
Sbjct: 161 NFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYV 217
Query: 266 KDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GEAALEEPT 322
D I A++ +IENP A G I+N+GNP+N +VR+LA M E+ A+ ++A
Sbjct: 218 DDGISALMKIIENPNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYTDSAKRVKL 277
Query: 323 VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
V+ +S +YG GY D R+P + ++LGW P+ + D L
Sbjct: 278 VETTSGAYYGNGYQDVQNRVPKIENTMRELGWAPQFTFDDALRQIF 323
>gi|229590502|ref|YP_002872621.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fluorescens SBW25]
gi|259563493|sp|C3KAD2.1|ARNA_PSEFS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|229362368|emb|CAY49270.1| putative formyl transferase [Pseudomonas fluorescens SBW25]
Length = 663
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDACNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIENAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMSETIGNTLDF 650
>gi|167893889|ref|ZP_02481291.1| hypothetical protein Bpse7_09036 [Burkholderia pseudomallei 7894]
Length = 333
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 188/346 (54%), Gaps = 29/346 (8%)
Query: 27 GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEG 85
GFIG HL ++IL T ++ +D+ D++ L++ E R+ F +I + +E
Sbjct: 3 GFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFEGDITINKEWVEY 56
Query: 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145
+K D+ + L AI TPA Y +PL +F LP+V+ + K L+ ST EVYG
Sbjct: 57 HVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYG- 115
Query: 146 TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL 205
+ D DP DAS +G I K RW YAC+KQL++R+I+ G E GL
Sbjct: 116 -----MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMDRVIWGYGME-GL 160
Query: 206 EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYI 265
FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG +R F Y+
Sbjct: 161 NFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYV 217
Query: 266 KDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GEAALEEPT 322
D I A++ +IEN A G I+N+GNP+N +VR+LA M E+ A+ ++A
Sbjct: 218 DDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKL 277
Query: 323 VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
V+ +S +YG GY D R+P + Q+LGW P+ + D L
Sbjct: 278 VETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIF 323
>gi|238791688|ref|ZP_04635325.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia intermedia ATCC 29909]
gi|238728792|gb|EEQ20309.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia intermedia ATCC 29909]
Length = 594
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 190/359 (52%), Gaps = 36/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L D FH +
Sbjct: 245 VLILGVNGFIGNHLTERLLRDNRYEVYGLDIGSDAISRFL--------DNPFFHFVEGDI 296
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++
Sbjct: 297 SIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVF 356
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R+I
Sbjct: 357 PSTSEVYG------------MCDDKEF---NEDSSRLIVGPINKQRWIYSVSKQLLDRVI 401
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A GA+ L FT+ RPFNW+GPR+D +D G R + NL+ P++LVDGG
Sbjct: 402 WAYGAKENLRFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIQLVDGG 458
Query: 257 QSQRTFIYIKDAIEAVLLMIE-NPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+R F I D IEA+ +IE N +G I N+GNP NE ++R+LAEM+ + K E
Sbjct: 459 AQKRCFTDIHDGIEALFRIIENNDGCCDGQIINIGNPTNEASIRELAEMLLSSFEK--HE 516
Query: 316 AALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P D+ S +YG+GY D + R P +T + L W P+ +L + TL +
Sbjct: 517 LRSHFPPFAGFKDIESSAYYGKGYQDVEYRTPSITNARRILHWQPEIALQQTVTETLDF 575
>gi|322833524|ref|YP_004213551.1| NAD-dependent epimerase/dehydratase [Rahnella sp. Y9602]
gi|384258694|ref|YP_005402628.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Rahnella aquatilis HX2]
gi|321168725|gb|ADW74424.1| NAD-dependent epimerase/dehydratase [Rahnella sp. Y9602]
gi|380754670|gb|AFE59061.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Rahnella aquatilis HX2]
Length = 660
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 189/360 (52%), Gaps = 30/360 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E ++I LD+ +D I + G F +I
Sbjct: 318 VLILGVNGFIGNHLSERLLREDRYEIYGLDISSDAISRFM------GNPHFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + A
Sbjct: 534 KRCFTDINDGIEALFRIIENRDNLCDGQIINIGNPTNEASIRELAEMLLSSFESHPLRAQ 593
Query: 318 LEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V S +YG+GY D + R P + + L W P+ + + TL + R+
Sbjct: 594 F-PPFAGFNLVESSTYYGKGYQDVEHRTPSIKNARRLLNWKPEIGMDKTVAETLDFFLRS 652
>gi|408481840|ref|ZP_11188059.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas sp. R81]
Length = 663
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDACNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIENAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMSETIGNTLDF 650
>gi|424067636|ref|ZP_17805092.1| Formyl transferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|408000205|gb|EKG40567.1| Formyl transferase [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 664
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/381 (33%), Positives = 198/381 (51%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 303 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 362
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H I D+ + L AI TP +Y PL
Sbjct: 363 KPNFHFIEGDISIHTEWIEYH-------------INKCDVVLPLVAIATPIEYTRNPLRV 409
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 410 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 454
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
+ G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 455 LVVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 510
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 511 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGN 570
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++RQL E + + + G +V S+ FYG+GY D R P +
Sbjct: 571 PDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRKPSIDNAK 630
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ +GW P L + + TL +
Sbjct: 631 KLIGWTPGIELSETIGKTLDF 651
>gi|383190694|ref|YP_005200822.1| methionyl-tRNA formyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371588952|gb|AEX52682.1| methionyl-tRNA formyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 660
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 189/360 (52%), Gaps = 30/360 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E ++I LD+ +D I + G F +I
Sbjct: 318 VLILGVNGFIGNHLSERLLREDRYEIYGLDISSDAISRFM------GNPHFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDHSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+
Sbjct: 477 YGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + A
Sbjct: 534 KRCFTDINDGIEALFRIIENRDNLCDGQIINIGNPTNEASIRELAEMLLSSFESHPLRAQ 593
Query: 318 LEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V S +YG+GY D + R P + + L W P+ + + TL + R+
Sbjct: 594 F-PPFAGFNLVESSTYYGKGYQDVEHRTPSIKNARRLLNWKPEIGMDKTVAETLDFFLRS 652
>gi|126452402|ref|YP_001066542.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106a]
gi|167738208|ref|ZP_02410982.1| hypothetical protein Bpse14_09080 [Burkholderia pseudomallei 14]
gi|167815397|ref|ZP_02447077.1| hypothetical protein Bpse9_09649 [Burkholderia pseudomallei 91]
gi|167823805|ref|ZP_02455276.1| hypothetical protein Bpseu9_09005 [Burkholderia pseudomallei 9]
gi|167845348|ref|ZP_02470856.1| hypothetical protein BpseB_08663 [Burkholderia pseudomallei B7210]
gi|167902344|ref|ZP_02489549.1| hypothetical protein BpseN_08742 [Burkholderia pseudomallei NCTC
13177]
gi|167910579|ref|ZP_02497670.1| hypothetical protein Bpse112_08795 [Burkholderia pseudomallei 112]
gi|254297382|ref|ZP_04964835.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 406e]
gi|403518968|ref|YP_006653101.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei BPC006]
gi|126226044|gb|ABN89584.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 1106a]
gi|157807021|gb|EDO84191.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei 406e]
gi|403074610|gb|AFR16190.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
pseudomallei BPC006]
Length = 341
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 188/346 (54%), Gaps = 29/346 (8%)
Query: 27 GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEG 85
GFIG HL ++IL T ++ +D+ D++ L++ E R+ F +I + +E
Sbjct: 3 GFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE------RMHFFEGDITINKEWVEY 56
Query: 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145
+K D+ + L AI TPA Y +PL +F LP+V+ + K L+ ST EVYG
Sbjct: 57 HVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYG- 115
Query: 146 TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL 205
+ D DP DAS +G I K RW YAC+KQL++R+I+ G E GL
Sbjct: 116 -----MCADEQF--DP-------DASALTYGPINKPRWIYACSKQLMDRVIWGYGME-GL 160
Query: 206 EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYI 265
FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG +R F Y+
Sbjct: 161 NFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYV 217
Query: 266 KDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GEAALEEPT 322
D I A++ +IEN A G I+N+GNP+N +VR+LA M E+ A+ ++A
Sbjct: 218 DDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKL 277
Query: 323 VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
V+ +S +YG GY D R+P + Q+LGW P+ + D L
Sbjct: 278 VETTSGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIF 323
>gi|365169733|ref|ZP_09360880.1| hypothetical protein HMPREF1006_01756 [Synergistes sp. 3_1_syn1]
gi|363618453|gb|EHL69800.1| hypothetical protein HMPREF1006_01756 [Synergistes sp. 3_1_syn1]
Length = 340
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 199/364 (54%), Gaps = 32/364 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + + G GFIG+HL E IL +T ++ D+ + LEP G +R F + +I
Sbjct: 1 MKLFITGVNGFIGTHLLENILAKTDWEVDGFDIASTN----LEP--YEGENRFAFRKGDI 54
Query: 78 KHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
D+ LE + AD I LA I PA Y +P+ T +F L +V+ C+++ KR+I
Sbjct: 55 FKDNEVLEAEVIKADAVIPLAGIAKPAYYIKKPVWTFELDFEQNLKMVRLCAKHGKRIIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D+ L KED SP G I K RW Y+C+KQ+++R+I
Sbjct: 115 PSTSEVYG------MSGDAEL---------KEDESPLTTGPIVKMRWIYSCSKQMMDRMI 159
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
A G E L++T+ RPFNW+GPR+D + E R + +++ R+ + LV+GG
Sbjct: 160 MAYGQEQDLQYTLFRPFNWVGPRLDTFKDAE---ERQARSVTQMLYDIIYRRKISLVNGG 216
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG- 314
+ +R+F +I D IE + +I N +A+ IFN+GNP N +V++LAE++ + K
Sbjct: 217 EQRRSFTWIGDGIEGLTAIIRNEGNKADSEIFNIGNPANNYSVKELAELLIDEAKKFPKF 276
Query: 315 -EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
EAA + + +YG+ YDD R+P + + +LGW PKT + ++L T+ +
Sbjct: 277 REAAEATELEIIPASAYYGKSYDDMQNRLPSVKKMEMKLGWKPKTGMREMLNKTIEW--- 333
Query: 374 TYAE 377
YAE
Sbjct: 334 -YAE 336
>gi|295097091|emb|CBK86181.1| Methionyl-tRNA formyltransferase [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 660
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLEDDNYEIYGLDIGSDAIGRFLTNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDTSSLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + + + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCNGEIINIGNPDNEASIRELAEMLLASFERHPLRSQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + L W P + ++ TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPTVKMEQTIDETLDFFLRT 652
>gi|407893828|ref|ZP_11152858.1| NAD-dependent epimerase/dehydratase family protein [Diplorickettsia
massiliensis 20B]
Length = 340
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 199/359 (55%), Gaps = 29/359 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPH-KILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76
+ I ++G GFIGSHL +IL P +I+ D+++ +IK L+ R++F + +
Sbjct: 3 LRIFILGINGFIGSHLLTQILARQPDWQIVGFDLHDHRIKDKLDDP------RLEFKQGD 56
Query: 77 IKHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I S + ++ D+ + L AI TPA Y PL +F L +++ C E++KR++
Sbjct: 57 INQSSHWIAQQVQNCDVILPLIAIATPATYVNNPLAIFELDFEANLRIIRLCVEHHKRVV 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG + DP V E+ SP I G I K RW Y+C+KQ+++R+
Sbjct: 117 FPSTSEVYG------------MCTDP---VFDEETSPLILGPINKPRWIYSCSKQMLDRV 161
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
I+A G ++ L +T+ RPFNWIG ++D P G RV++ F N+LR + ++LV+G
Sbjct: 162 IHAYGLQSRLNYTLFRPFNWIGAQLD---DPHNPKPGSSRVISQFMGNILRGESIQLVEG 218
Query: 256 GQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GQ +R+FI I+D A+L ++EN A IFN+GNP N+ ++ QLA + E +
Sbjct: 219 GQQRRSFIDIEDGTSALLKILENKEGCAEQRIFNIGNPQNDCSIEQLARYLLEEIKRYPN 278
Query: 315 EAALEEPTV--DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
AA+ + T ++ +++YG GY D R+P + + LGW PK + L+ + Y
Sbjct: 279 YAAIAQNTQFETIAGEQYYGAGYQDVAYRVPSIKNAQRYLGWTPKIDIQTSLQKIVAYH 337
>gi|375086966|ref|ZP_09733358.1| hypothetical protein HMPREF9454_01969 [Megamonas funiformis YIT
11815]
gi|374563681|gb|EHR34992.1| hypothetical protein HMPREF9454_01969 [Megamonas funiformis YIT
11815]
Length = 343
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 202/370 (54%), Gaps = 32/370 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ I + G GFIGSH E L +T +I D+ ++ I L+ R + +I
Sbjct: 1 MKIFVTGVNGFIGSHFLEMALAQTDWEIQGFDLADNNITQFLDNP------RFSMKKGDI 54
Query: 78 -KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
K ++ L IK D+ + L I PA Y TRPL T +F L +V+ C+E KR+I
Sbjct: 55 FKEEAWLNEQIKECDVLLPLIGIARPAYYITRPLWTFELDFEQNLKMVRKCAEYGKRVIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG +P DP V+ ED S I G + K RW Y+C+KQ+++R+I
Sbjct: 115 PSTSEVYG------MP-------DPNNKVMDEDNSNLILGPVSKSRWIYSCSKQMMDRVI 161
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G E GL+FT+ RPFNW+GPR+D SE R + F ++L + LV+GG
Sbjct: 162 FAFGQEMGLKFTLFRPFNWVGPRLD---SFKDASEHKGRSITQFIYDVLYTGKITLVNGG 218
Query: 257 QSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTE---VYAKV 312
+R+F ++ D ++ ++ +I N +A G IFN+GNP N +++++AE++ + + K
Sbjct: 219 AQRRSFTWVGDGVQGLIDIITNKDDQAEGQIFNIGNPENNYSIKEMAEIVVDEMKKFPKF 278
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
+A E V + S ++YG+ YDD R+P + + +LGW PK +L + + TL +
Sbjct: 279 KDKADKVEFIV-MDSDKYYGKNYDDMQDRLPSVKKMETRLGWKPKATLREAIHYTLEW-- 335
Query: 373 RTYAEAIKQA 382
YA+ + +A
Sbjct: 336 --YAKNLDKA 343
>gi|378769417|ref|YP_005197892.1| bifunctional polymyxin resistance ArnA protein, Includes:
UDP-glucuronic acid decarboxylase [Pantoea ananatis LMG
5342]
gi|365188906|emb|CCF11855.1| bifunctional polymyxin resistance ArnA protein, Includes:
UDP-glucuronic acid decarboxylase [Pantoea ananatis LMG
5342]
Length = 660
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I + G R QF +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFEVFGLDIGSDAISRFV------GHPRFQFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYGKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDA---------------NFDEDHSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL DGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLFDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D +EA+ +IEN +G I N+GNP NE ++++LAE + E + + A+
Sbjct: 534 KRCFTDISDGVEALFKIIENKNNNCDGQIINIGNPDNEASIKELAERLLESFERHPLRAS 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + LGW P + +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLGWTPTVEMNTTIDNTLDFFLRT 652
>gi|401765625|ref|YP_006580632.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae subsp. cloacae
ENHKU01]
gi|400177159|gb|AFP72008.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae subsp. cloacae
ENHKU01]
Length = 660
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 190/363 (52%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLKDDNYEIYGLDIGADAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDKNF---DEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + K
Sbjct: 534 KRCFTDISDGIEALFRIIENKDNRCNGQIINIGNPDNEASIRELAEMLLASFERHPLRDK 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S +YG+GY D + R P + + L W P + ++ TL +
Sbjct: 594 FPPFAGFRE----VESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPTVKMEQTIDETLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|386076529|ref|YP_005990612.1| bifunctional polymyxin resistance protein ArnA [Pantoea ananatis
PA13]
gi|354685397|gb|AER34764.1| bifunctional polymyxin resistance protein ArnA [Pantoea ananatis
PA13]
Length = 660
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I + G R QF +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFEVFGLDIGSDAISRFV------GHPRFQFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYGKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDA---------------NFDEDHSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL DGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLFDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D +EA+ +IEN +G I N+GNP NE ++++LAE + E + + A+
Sbjct: 534 KRCFTDISDGVEALFKIIENKNNNCDGQIINIGNPDNEASIKELAERLLESFERHPLRAS 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + LGW P + +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLGWTPTVEMNTTIDNTLDFFLRT 652
>gi|401678600|ref|ZP_10810560.1| ArnA Protein [Enterobacter sp. SST3]
gi|400214227|gb|EJO45153.1| ArnA Protein [Enterobacter sp. SST3]
Length = 660
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 127/363 (34%), Positives = 190/363 (52%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLKDDNYEIYGLDIGADAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDKNF---DEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + K
Sbjct: 534 KRCFTDISDGIEALFRIIENKDNRCNGEIINIGNPDNEASIRELAEMLLASFERHPLRDK 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S +YG+GY D + R P + + L W P + ++ TL +
Sbjct: 594 FPPFAGFRE----VESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPTVKMEQTIDETLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|312960856|ref|ZP_07775361.1| Bifunctional polymyxin resistance protein [Pseudomonas fluorescens
WH6]
gi|311284514|gb|EFQ63090.1| Bifunctional polymyxin resistance protein [Pseudomonas fluorescens
WH6]
Length = 663
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDACNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIENAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWAPTVEMSETIGNTLDF 650
>gi|308185448|ref|YP_003929580.1| bifunctional polymyxin resistance protein arna [Pantoea vagans
C9-1]
gi|308055728|gb|ADO07898.1| Bifunctional polymyxin resistance protein arnA [Pantoea vagans
C9-1]
Length = 659
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/360 (34%), Positives = 194/360 (53%), Gaps = 30/360 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I LE R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDEHFEVYGLDISSDAISRFLE------HPRFHFVEGDIAI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPS 431
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T SF ED S + G I KQRW Y+ +KQL++R+I+
Sbjct: 432 TSEVYGMCTDASF----------------DEDFSNLVVGPINKQRWIYSVSKQLLDRVIW 475
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 476 AYGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGK 532
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSG 314
+R F I+D +EA+ +IEN + +G I N+GNP NE ++++LAE + E + + +
Sbjct: 533 QKRCFTDIQDGVEALFRIIENKQQNCDGQIINIGNPDNEASIKELAEQLLESFERHPLRS 592
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+ +V S +YG+GY D + R P + + LGW P ++ +++TL + RT
Sbjct: 593 QFPPFAGFREVESSSYYGKGYQDVEHRKPAIRNARRLLGWTPTVTMDVTIDNTLDFFLRT 652
>gi|291619557|ref|YP_003522299.1| ArnA [Pantoea ananatis LMG 20103]
gi|291154587|gb|ADD79171.1| ArnA [Pantoea ananatis LMG 20103]
Length = 660
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I + G R QF +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFEVFGLDIGSDAISRFV------GHPRFQFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYGKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDA---------------NFDEDHSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL DGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLFDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D +EA+ +IEN +G I N+GNP NE ++++LAE + E + + A+
Sbjct: 534 KRCFTDISDGVEALFKIIENKNNNCDGQIINIGNPDNEASIKELAERLLESFERHPLRAS 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + LGW P + +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLGWTPTVEMNTTIDNTLDFFLRT 652
>gi|386018366|ref|YP_005940971.1| bifunctional polymyxin resistance ArnA protein [Includes: UDP-
glucuronic acid decarboxylase] ArnA [Pantoea ananatis
AJ13355]
gi|327396452|dbj|BAK13873.1| bifunctional polymyxin resistance ArnA protein [Includes: UDP-
glucuronic acid decarboxylase] ArnA [Pantoea ananatis
AJ13355]
Length = 660
Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 189/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I + G R QF +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFEVFGLDIGSDAISRFV------GHPRFQFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYGKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDA---------------NFDEDHSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL DGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLFDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D +EA+ +IEN +G I N+GNP NE ++++LAE + E + + A+
Sbjct: 534 KRCFTDISDGVEALFKIIENKNNNCDGQIINIGNPDNEASIKELAERLLESFERHPLRAS 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + LGW P + +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLGWTPTVEMNTTIDNTLDFFLRT 652
>gi|193068155|ref|ZP_03049119.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E110019]
gi|192958434|gb|EDV88873.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E110019]
Length = 660
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L D FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------DHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|399007152|ref|ZP_10709668.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM17]
gi|398121109|gb|EJM10752.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM17]
Length = 668
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 199/379 (52%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ D I+
Sbjct: 304 GSLLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDKYEVYGLDIGCDAIERLRNHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 HFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S I
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDRNF---DEDSSNLI 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G++ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYGSK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +++N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G +V SK FYG GY D + R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFREVESKSFYGAGYQDVEHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMKETIGNTLDF 650
>gi|300691693|ref|YP_003752688.1| UDP-glucuronic acid decarboxylase (UDP-GlcUA decarboxylase)
[Ralstonia solanacearum PSI07]
gi|299078753|emb|CBJ51413.1| UDP-glucuronic acid decarboxylase (UDP-GlcUA decarboxylase)
[Ralstonia solanacearum PSI07]
gi|344169997|emb|CCA82371.1| UDP-glucuronic acid decarboxylase (UDP-GlcUA decarboxylase) [blood
disease bacterium R229]
Length = 351
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 127/375 (33%), Positives = 197/375 (52%), Gaps = 48/375 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY-------------NDKIKHLLEPESQTG 66
+ ++G GFIG HL ++IL T +I +VY N H E +
Sbjct: 4 VLILGVNGFIGHHLSKRILESTDPEISQWEVYGMDMQTERLGDLVNHPRMHFFEGDITIN 63
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
+ +++H ++ D+ + L AI TP+ Y PL +F LP+V+
Sbjct: 64 KEWVEYH-------------VRKCDVILPLVAIATPSTYVKAPLRVFELDFEANLPIVRS 110
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
++ K L+ ST EVYG + D DP +ASP ++G I K RW YA
Sbjct: 111 AAKYGKHLVFPSTSEVYG------MCGDDEF--DP-------EASPLVYGPINKPRWIYA 155
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
C+KQL++R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R
Sbjct: 156 CSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLD---SIHTPKEGSSRVVTQFLGHIVR 211
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMM 305
+ ++LVDGG +R F Y+ D I+A++ +I N A+G I+N+GNP N +VR+LA+MM
Sbjct: 212 GENIQLVDGGHQKRAFTYVDDGIDALVRIIANKDGVASGKIYNIGNPSNNYSVRELADMM 271
Query: 306 TEVYAKVS--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
++ ++ E A + V+ +S +YG+GY D R+P + ++LGW P T++ +
Sbjct: 272 LKMAGTIAEYKENAQKVKLVETTSGAYYGKGYQDVQNRVPKIANTMEELGWKPTTAMEET 331
Query: 364 LESTLTYQHRTYAEA 378
L + AEA
Sbjct: 332 LANIFEAYREHAAEA 346
>gi|170704121|ref|ZP_02894736.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria
IOP40-10]
gi|172060821|ref|YP_001808473.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
ambifaria MC40-6]
gi|170130970|gb|EDS99682.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria
IOP40-10]
gi|171993338|gb|ACB64257.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MC40-6]
Length = 351
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 193/355 (54%), Gaps = 31/355 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S + DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV---Y 309
DGG +R F I D I A++ +I+N A+G I+N+GNP N +VR+LA M E+ Y
Sbjct: 216 DGGSQKRAFTDIDDGISALMKIIDNKNGVASGKIYNIGNPKNNFSVRELAHKMLELAAEY 275
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+ +G A + V+ +S +YG GY D R+P + Q+L W P+++ D L
Sbjct: 276 PEYAGSAK-QVQLVETTSGAYYGNGYQDVQNRVPKIDNTMQELAWAPQSTFDDAL 329
>gi|398873525|ref|ZP_10628780.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM74]
gi|398199190|gb|EJM86135.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM74]
Length = 663
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLSDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QDP + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDPNF---DEDNSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + A D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRANFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWTPTVEMSETIGNTLDF 650
>gi|398907667|ref|ZP_10653986.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM50]
gi|398171102|gb|EJM59014.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM50]
Length = 664
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIDRLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---DEDSSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSISKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWAPTVEMTETIGNTLDF 650
>gi|400405687|ref|YP_006588546.1| methionyl-tRNA formyltransferase [secondary endosymbiont of
Ctenarytaina eucalypti]
gi|400364050|gb|AFP85118.1| methionyl-tRNA formyltransferase [secondary endosymbiont of
Ctenarytaina eucalypti]
Length = 660
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 189/366 (51%), Gaps = 42/366 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L + ++I LD+ D I+ H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLHDGRYEIYGLDISTDAIRRFLVNPFFHFIEGDINIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H IK D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYQ 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG V ED S I G I+KQRW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCTDR---------------VFDEDESSLIVGPIKKQRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+++A G + L FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVLWAYGEQECLRFTLFRPFNWMGPRLD---TLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
LVDGG +R F I D IEA+ +IEN +G I N+GNP NE ++RQLAE++ +
Sbjct: 527 LVDGGAQKRCFTDISDGIEALFRIIENKNHNCDGQIINIGNPGNEASIRQLAELLLASFN 586
Query: 311 K--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
+ + +V S +YG+GY D + R P + L WNPK + ++ TL
Sbjct: 587 RHPLRQHFPPFAGFRNVESSSYYGKGYQDVEHRKPSIRNAKHLLDWNPKVPMAQTIDETL 646
Query: 369 TYQHRT 374
+ +T
Sbjct: 647 DFFLKT 652
>gi|394990657|ref|ZP_10383488.1| NAD-dependent epimerase/dehydratase family protein [Sulfuricella
denitrificans skB26]
gi|393790139|dbj|GAB73127.1| NAD-dependent epimerase/dehydratase family protein [Sulfuricella
denitrificans skB26]
Length = 347
Score = 214 bits (544), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 197/365 (53%), Gaps = 28/365 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL ++IL T ++ +D+Y++++ L+ R F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVYGMDMYSERVTELM------ANPRFNFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y PL +F LP+V+ C + K LI S
Sbjct: 58 NKEWIEYHVKKCDVILPLVAIATPATYVKEPLKVFELDFEANLPIVRQCVQYGKHLIFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + +D DP + S I G I K RW Y+C+KQL++R+I+A
Sbjct: 118 TSEVYG------MCRDEEF--DP-------ENSELILGPINKPRWIYSCSKQLMDRVIFA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+ FT+ RPFNWIG +D I+ EG RV+ F +++R + +KLVDGG +
Sbjct: 163 YALKTEFNFTLFRPFNWIGAGLD---NINTAKEGSSRVITQFLGHIVRGEDIKLVDGGTA 219
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV--YAKVSGE 315
+R++ Y D I+A++ +IEN A G I+N+GNP N +V++LA+MM E+ + E
Sbjct: 220 KRSYTYASDGIDALMKIIENKNGVATGQIYNIGNPTNNYSVKELAQMMLELAKHYPEYKE 279
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
A + ++V+S ++YG+GY D R+P + + L W P ++ D L+
Sbjct: 280 TAQKVKMLEVTSADYYGKGYQDVQNRVPKIDNTMKDLDWKPSVTMADALKHIYEAYRGQV 339
Query: 376 AEAIK 380
AEA K
Sbjct: 340 AEARK 344
>gi|410089709|ref|ZP_11286321.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas viridiflava UASWS0038]
gi|409762989|gb|EKN47979.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas viridiflava UASWS0038]
Length = 663
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 129/385 (33%), Positives = 199/385 (51%), Gaps = 51/385 (13%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+ G+ ++ RP + + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 302 VQGSRLQGQNQSRPTRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRT 361
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 362 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 408
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD ++ ED S
Sbjct: 409 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDASF---SEDTSN 453
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
+ G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 454 LVVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 509
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGN 291
R + +L+ P++LVDGG +R F + D IEA+ +IEN R NG I N+GN
Sbjct: 510 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRGERCNGQIINIGN 569
Query: 292 PHNEVTVRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 345
P NE ++RQL E + + + A E V S+ FYG+GY D R P +
Sbjct: 570 PDNEASIRQLGEELLRQFEAHPLRSNFPPFAGFRE----VESQSFYGKGYQDVSHRKPCV 625
Query: 346 TIINQQLGWNPKTSLWDLLESTLTY 370
+ L W P L + + TL +
Sbjct: 626 DNAKRLLDWTPTIELSETIGKTLDF 650
>gi|381406538|ref|ZP_09931220.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pantoea sp. Sc1]
gi|380735317|gb|EIB96382.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pantoea sp. Sc1]
Length = 659
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 193/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLEDAHFEVYGLDISSDAISRFLD------HPRFHFVEGDIAI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG DS ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG-----MCTDDS----------FDEDCSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F IKD +EA+ +IEN + +G I N+GNP NE ++++LAE + E + + + +
Sbjct: 534 KRCFTDIKDGVEALFRIIENKQQNCDGQIINIGNPDNEASIKELAEQLLESFERHPLRSQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + LGW P ++ +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPAIRNARRLLGWTPTVTMDVTIDNTLDFFLRT 652
>gi|407364776|ref|ZP_11111308.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas mandelii JR-1]
Length = 668
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 194/372 (52%), Gaps = 29/372 (7%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I L
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIDRL---- 359
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
R F +I H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 360 --RSHPRFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENL 417
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + NKR+I ST EVYG + QD + ED+S + G I KQ
Sbjct: 418 KLVRYCVKYNKRVIFPSTSEVYG------------MCQDQNF---DEDSSNLVVGPINKQ 462
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 463 RWIYSVSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 518
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQ 300
NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP NE ++RQ
Sbjct: 519 LNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNENDACNGQIINIGNPDNEASIRQ 578
Query: 301 LAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
L E + + + DV SK FYG GY D R P + + L W P
Sbjct: 579 LGEELLRQFEAHPLRDNFPPFAGFRDVESKAFYGTGYQDVSHRKPSIANAKRLLDWTPTV 638
Query: 359 SLWDLLESTLTY 370
+ + + +TL +
Sbjct: 639 EMSETIGNTLDF 650
>gi|238796335|ref|ZP_04639844.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia mollaretii ATCC 43969]
gi|238719780|gb|EEQ11587.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia mollaretii ATCC 43969]
Length = 623
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 189/359 (52%), Gaps = 36/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L D FH +
Sbjct: 274 VLILGVNGFIGNHLTERLLRDDRYEVYGLDIGSDAISRFL--------DNPYFHFVEGDI 325
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++
Sbjct: 326 SIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVF 385
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + D + ED+S I G I KQRW Y+ +KQL++R+I
Sbjct: 386 PSTSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVI 430
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A GA+ L FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 431 WAYGAKENLRFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGG 487
Query: 257 QSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + K E
Sbjct: 488 AQKRCFTDIHDGIEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLSSFEK--HE 545
Query: 316 AALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P D+ S +YG+GY D + R P + + L W P+ +L + TL +
Sbjct: 546 LRDHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILHWQPEVALQQTVTETLDF 604
>gi|398973885|ref|ZP_10684677.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM25]
gi|398142312|gb|EJM31212.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM25]
Length = 663
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 195/372 (52%), Gaps = 29/372 (7%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I L
Sbjct: 304 GSLLRGAESGRGPRRTRVLILGVNGFIGNHLSERLLRDERYEVYGLDIGSDAIDRL---- 359
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
R F +I H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 360 --RSHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 417
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + NKR+I ST EVYG + QD + ED+S I G I KQ
Sbjct: 418 KLVRYCVKYNKRVIFPSTSEVYG------------MCQDKHF---DEDSSNLIVGPINKQ 462
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 463 RWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 518
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQ 300
NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP NE ++RQ
Sbjct: 519 LNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPDNEASIRQ 578
Query: 301 LAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
L E + + + DV S+ FYG GY D + R P + + L W P
Sbjct: 579 LGEELLRQFEAHPLRSNFPPFAGFRDVESRAFYGAGYQDVEHRKPSIANAKRLLDWTPTV 638
Query: 359 SLWDLLESTLTY 370
+ + + +TL +
Sbjct: 639 EMRETIGNTLDF 650
>gi|365847137|ref|ZP_09387627.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yokenella regensburgei ATCC 43003]
gi|364572776|gb|EHM50312.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yokenella regensburgei ATCC 43003]
Length = 661
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 123/359 (34%), Positives = 188/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLKDDNFEIFGLDIGSDAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDA---------------NFDEDNSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +N L+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG
Sbjct: 477 YGDKNNLKFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGSPIKLIEGGSQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
DV S +YG+GY D + R P + + L W P + +E TL + RT
Sbjct: 594 FPPFAGFRDVESSNYYGKGYQDVEHRKPSIRNAKRCLNWEPTVDMEKTVEETLDFFLRT 652
>gi|424923065|ref|ZP_18346426.1| Methionyl-tRNA formyltransferase [Pseudomonas fluorescens R124]
gi|404304225|gb|EJZ58187.1| Methionyl-tRNA formyltransferase [Pseudomonas fluorescens R124]
Length = 663
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 198/379 (52%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSLLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S I
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDKNF---DEDSSNLI 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D + R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRHNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMRETIGNTLDF 650
>gi|170024072|ref|YP_001720577.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pseudotuberculosis YPIII]
gi|226723730|sp|B1JJ30.1|ARNA_YERPY RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|169750606|gb|ACA68124.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis
YPIII]
Length = 667
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 477 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 534 KRCFTDIHDGIEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFE--NHELR 591
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 592 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 651
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 652 A---AVIEKTAAP 661
>gi|253989357|ref|YP_003040713.1| bifunctional polymyxin resistance protein [Photorhabdus
asymbiotica]
gi|253780807|emb|CAQ83969.1| bifunctional polymyxin resistance protein [Photorhabdus
asymbiotica]
Length = 660
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 193/366 (52%), Gaps = 28/366 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLRDGNYDIYGMDIGSSAIERFI------GNPHFHFIEGDVNI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDDSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ +KLVDGG+
Sbjct: 477 YGEKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSSIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYA--KVSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE ++RQLAEM+ + + ++ G
Sbjct: 534 KRCFTDINDGIEALFRIIENRDGLCDGQIINIGNPTNEASIRQLAEMLLDSFENHELRGY 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+ S +YG+GY D + R P + + LGW P + ++ TL + R
Sbjct: 594 FPPFAGFKKIESGSYYGKGYQDVEHRKPSIKNAERLLGWKPTIDMKQTIDETLDFFLRGA 653
Query: 376 AEAIKQ 381
E + +
Sbjct: 654 VEELGK 659
>gi|51596652|ref|YP_070843.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pseudotuberculosis IP 32953]
gi|153948868|ref|YP_001400702.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pseudotuberculosis IP 31758]
gi|186895709|ref|YP_001872821.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pseudotuberculosis PB1/+]
gi|81595797|sp|Q93PD8.1|ARNA_YERPS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|166988219|sp|A7FHH4.1|ARNA_YERP3 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723728|sp|B2K5L3.1|ARNA_YERPB RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|14582789|gb|AAK69642.1|AF336802_4 unknown [Yersinia pseudotuberculosis]
gi|51589934|emb|CAH21566.1| probable formyl transferase [Yersinia pseudotuberculosis IP 32953]
gi|152960363|gb|ABS47824.1| bifunctional polymyxin resistance ArnA protein [Yersinia
pseudotuberculosis IP 31758]
gi|186698735|gb|ACC89364.1| NAD-dependent epimerase/dehydratase [Yersinia pseudotuberculosis
PB1/+]
Length = 667
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 477 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 534 KRCFTDIHDGIEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFE--NHELR 591
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 592 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 651
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 652 A---AVIEKTAAP 661
>gi|115351851|ref|YP_773690.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
ambifaria AMMD]
gi|115281839|gb|ABI87356.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD]
Length = 350
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 129/355 (36%), Positives = 192/355 (54%), Gaps = 31/355 (8%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K + ++G GFIG HL ++IL T ++ +D+ D++ L+ E R+ F
Sbjct: 1 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFE 54
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I + +E +K D+ + L AI TPA Y +PL +F LP+V+ + K
Sbjct: 55 GDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKH 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
L+ ST EVYG S DP DAS +G I K RW YAC+KQL++
Sbjct: 115 LVFPSTSEVYGMC--------SDEEFDP-------DASALTYGPINKPRWIYACSKQLMD 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+ G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LV
Sbjct: 160 RVIWGYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLV 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV---Y 309
DGG +R F I D I A++ +I+N A+G I+N+GNP N +VR+LA M E+ Y
Sbjct: 216 DGGSQKRAFTDIDDGISALMKIIDNKNGVASGKIYNIGNPKNNFSVRELAHKMLELAAEY 275
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+ +G A + V+ +S +YG GY D R+P + Q+L W P+++ D L
Sbjct: 276 PEYAGSAK-QVQLVETTSGAYYGNGYQDVQNRVPKIDNTMQELAWAPQSTFDDAL 329
>gi|383813969|ref|ZP_09969392.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia sp. M24T3]
gi|383297167|gb|EIC85478.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Serratia sp. M24T3]
Length = 660
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/383 (33%), Positives = 195/383 (50%), Gaps = 52/383 (13%)
Query: 10 LDGRP----IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L GRP + + ++G GFIG+HL E++L + ++I LD+ +D I +
Sbjct: 304 LTGRPNAALKRRTRVLILGVNGFIGNHLSERLLRDGKYEIYGLDISSDAISRFM------ 357
Query: 66 GADRIQFHRLNIK---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
D FH + H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 358 --DNPNFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLK 415
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+V+ C + KR+I ST EVYG + D + ED S I G I KQR
Sbjct: 416 IVRDCVKYKKRIIFPSTSEVYG------------MCDDKEF---DEDTSNLIVGPINKQR 460
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
W Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 461 WIYSVSKQLLDRVIWAYGAKEGLRFTLFRPFNWMGPRLD---NLDAARVGSSRAITQLIL 517
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQL 301
NL+ P+KL+DGG+ +R F I D IEA+ +IEN +G I N+GNP NE ++R+L
Sbjct: 518 NLVEGSPIKLIDGGEQKRCFTDINDGIEALFRIIENRDNLCDGEIINIGNPTNEASIREL 577
Query: 302 AEMMTEVYAKVSGEAALEEPTVD----------VSSKEFYGEGYDDSDKRIPDMTIINQQ 351
AEM+ + + P D + S +YG+GY D R P + +
Sbjct: 578 AEMLLKSFDA--------HPLRDQFPPFAGMKLIESSSYYGKGYQDVAHRTPSIKNARKL 629
Query: 352 LGWNPKTSLWDLLESTLTYQHRT 374
L W P+ + +++TL + R+
Sbjct: 630 LNWTPEVKMDKTIDATLDFFLRS 652
>gi|238782547|ref|ZP_04626578.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia bercovieri ATCC 43970]
gi|238716474|gb|EEQ08455.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia bercovieri ATCC 43970]
Length = 623
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 191/362 (52%), Gaps = 42/362 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L + +++ LD+ +D I H +E + ++ I+
Sbjct: 274 VLILGVNGFIGNHLTERLLRDDRYEVYGLDIGSDAISRFLNNPYFHFVEGDISIHSEWIE 333
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H IK D+ + L AI TP +Y PL +F + L +V+ C + N
Sbjct: 334 YH-------------IKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYN 380
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR++ ST EVYG + D + ED+S I G I KQRW Y+ +KQL
Sbjct: 381 KRIVFPSTSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQL 425
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A GA+ L FT+ RPFNW+GPR+D +D G R + NL+ P+K
Sbjct: 426 LDRVIWAYGAKENLRFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIK 482
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
LVDGG +R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ +
Sbjct: 483 LVDGGAQKRCFTDIHDGIEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLSSFE 542
Query: 311 --KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++ G D+ S +YG+GY D + R P + + L W P+ +L + TL
Sbjct: 543 EHELRGHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILHWQPEVALQQTVTETL 602
Query: 369 TY 370
+
Sbjct: 603 DF 604
>gi|186475688|ref|YP_001857158.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
phymatum STM815]
gi|184192147|gb|ACC70112.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815]
Length = 348
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/363 (35%), Positives = 194/363 (53%), Gaps = 29/363 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L++ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLVKHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVQQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG S + DP DAS +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMC--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 163 YGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGAQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
+R F I D I A++ +IEN A+G I+N+GNP N +VR+LA M + A+ E
Sbjct: 219 KRAFTDIDDGISALMKIIENKNGVASGKIYNIGNPTNNFSVRELAHKMLALAAEFPEYAE 278
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+A + V+ SS +YG GY D R+P + Q+L W P+++ + L
Sbjct: 279 SAKKVQLVETSSGAYYGAGYQDVQNRVPKIDNTKQELAWAPQSTFDEALRKIFEAYRGHV 338
Query: 376 AEA 378
AEA
Sbjct: 339 AEA 341
>gi|77459068|ref|YP_348574.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fluorescens Pf0-1]
gi|123604592|sp|Q3KCC1.1|ARNA_PSEPF RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|77383071|gb|ABA74584.1| putative formyl transferase [Pseudomonas fluorescens Pf0-1]
Length = 668
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/372 (35%), Positives = 194/372 (52%), Gaps = 29/372 (7%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I L
Sbjct: 304 GSLLRGAESGRGPRRTRVLILGVNGFIGNHLSERLLRDERYEVYGLDIGSDAIDRL---- 359
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
R F +I H +E IK D+ + L AI TP +Y PL +F + L
Sbjct: 360 --RSHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 417
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + NKR+I ST EVYG + QD + ED S I G I KQ
Sbjct: 418 KLVRYCVKYNKRVIFPSTSEVYG------------MCQDKHF---DEDRSNLIVGPINKQ 462
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 463 RWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 518
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQ 300
NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP NE ++RQ
Sbjct: 519 LNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPDNEASIRQ 578
Query: 301 LAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
L E + + + DV SK FYG GY D + R P + + L W P
Sbjct: 579 LGEELLRQFEAHPLRSNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIANAKRLLDWTPTV 638
Query: 359 SLWDLLESTLTY 370
+ + + +TL +
Sbjct: 639 EMRETIGNTLDF 650
>gi|296136198|ref|YP_003643440.1| NAD-dependent epimerase/dehydratase [Thiomonas intermedia K12]
gi|410694008|ref|YP_003624630.1| putative NAD-dependent epimerase/dehydratase,yfbG, arnA, pmrI, SAF
[Thiomonas sp. 3As]
gi|294340433|emb|CAZ88814.1| putative NAD-dependent epimerase/dehydratase,yfbG, arnA, pmrI, SAF
[Thiomonas sp. 3As]
gi|295796320|gb|ADG31110.1| NAD-dependent epimerase/dehydratase [Thiomonas intermedia K12]
Length = 351
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 196/370 (52%), Gaps = 34/370 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GFIG HL +IL T ++ +D+ D+++ L T R +F +I
Sbjct: 4 VLILGVNGFIGHHLSMRILATTDWQVYGMDMNADRVEDL------TANKRFKFFEGDITI 57
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E ++ D+ + L AI TPA Y PL +F LP+V+ ++ K L+ S
Sbjct: 58 NKEWIEYHVRKCDVILPLVAIATPATYVKAPLRVFELDFEANLPIVRAAVKHKKHLVFPS 117
Query: 139 TCEVYGKT-IGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG + F P++SPL ++G I K RW YAC+KQL++R+I
Sbjct: 118 TSEVYGMSGDAEFDPENSPL----------------VYGPINKPRWIYACSKQLMDRVIA 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G ++GL +T+ RPFNWIG +D I EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGQQDGLNYTLFRPFNWIGAGLD---NIFSAKEGSSRVVTQFLGHIVRGETISLVDGGH 218
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I+A++ +IEN A+G I+N+GNP N +VR+LA+MM + A +
Sbjct: 219 QKRAFTDIDDGIDALMKIIENKNGVASGQIYNIGNPANNHSVRELADMMLRLAADMPEYA 278
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
E+A V+ SS +YG GY D R+P +T + L W PK +++ L
Sbjct: 279 ESAKNVKVVETSSGAYYGAGYQDVQNRVPKITNTMRDLDWAPKAD----MQTALRKIFEA 334
Query: 375 YAEAIKQAVA 384
Y I QA A
Sbjct: 335 YRGQIAQARA 344
>gi|22125812|ref|NP_669235.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis KIM10+]
gi|45441997|ref|NP_993536.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis biovar Microtus str.
91001]
gi|108807759|ref|YP_651675.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis Antiqua]
gi|108812036|ref|YP_647803.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis Nepal516]
gi|145598033|ref|YP_001162109.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis Pestoides F]
gi|149365672|ref|ZP_01887707.1| probable formyl transferase [Yersinia pestis CA88-4125]
gi|162419909|ref|YP_001607017.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis Angola]
gi|165927508|ref|ZP_02223340.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165939521|ref|ZP_02228067.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|166011815|ref|ZP_02232713.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166211092|ref|ZP_02237127.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. B42003004]
gi|167400957|ref|ZP_02306463.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167422073|ref|ZP_02313826.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167424841|ref|ZP_02316594.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|167469208|ref|ZP_02333912.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
FV-1]
gi|218929508|ref|YP_002347383.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis CO92]
gi|229837945|ref|ZP_04458104.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229895105|ref|ZP_04510281.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis Pestoides A]
gi|229898506|ref|ZP_04513651.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229902347|ref|ZP_04517467.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis Nepal516]
gi|270490471|ref|ZP_06207545.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis KIM D27]
gi|294503577|ref|YP_003567639.1| hypothetical protein YPZ3_1467 [Yersinia pestis Z176003]
gi|384122023|ref|YP_005504643.1| hypothetical protein YPD4_1432 [Yersinia pestis D106004]
gi|384125975|ref|YP_005508589.1| hypothetical protein YPD8_1513 [Yersinia pestis D182038]
gi|384139755|ref|YP_005522457.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis A1122]
gi|384414571|ref|YP_005623933.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|420547349|ref|ZP_15045248.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-01]
gi|420563707|ref|ZP_15059744.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-04]
gi|420568747|ref|ZP_15064317.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-05]
gi|420574409|ref|ZP_15069447.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-06]
gi|420579718|ref|ZP_15074266.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-07]
gi|420606654|ref|ZP_15098495.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-12]
gi|420617410|ref|ZP_15108057.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-14]
gi|420622740|ref|ZP_15112815.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-15]
gi|420643626|ref|ZP_15131682.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-29]
gi|420648885|ref|ZP_15136455.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-32]
gi|420670212|ref|ZP_15155656.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-45]
gi|420675563|ref|ZP_15160525.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-46]
gi|420691656|ref|ZP_15174894.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-52]
gi|420697446|ref|ZP_15179974.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-53]
gi|420703099|ref|ZP_15184591.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-54]
gi|420708698|ref|ZP_15189393.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-55]
gi|420714106|ref|ZP_15194226.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-56]
gi|420719584|ref|ZP_15198969.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-58]
gi|420730714|ref|ZP_15208801.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-60]
gi|420773613|ref|ZP_15246415.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-76]
gi|420789976|ref|ZP_15260879.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-90]
gi|420795483|ref|ZP_15265837.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-91]
gi|420805929|ref|ZP_15275247.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-93]
gi|420816805|ref|ZP_15285043.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-95]
gi|420827183|ref|ZP_15294365.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-98]
gi|420837741|ref|ZP_15303911.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-100]
gi|420842924|ref|ZP_15308609.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-101]
gi|420848580|ref|ZP_15313695.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-102]
gi|421763913|ref|ZP_16200705.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis INS]
gi|81517989|sp|Q8ZDX8.1|ARNA_YERPE RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|123246475|sp|Q1CIH7.1|ARNA_YERPN RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|123372411|sp|Q1C742.1|ARNA_YERPA RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|166988220|sp|A4TIM4.1|ARNA_YERPP RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723729|sp|A9R093.1|ARNA_YERPG RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|21958739|gb|AAM85486.1|AE013794_7 putative transformylase [Yersinia pestis KIM10+]
gi|45436860|gb|AAS62413.1| probable formyl transferase [Yersinia pestis biovar Microtus str.
91001]
gi|108775684|gb|ABG18203.1| formyl transferase [Yersinia pestis Nepal516]
gi|108779672|gb|ABG13730.1| formyl transferase [Yersinia pestis Antiqua]
gi|115348119|emb|CAL21047.1| probable formyl transferase [Yersinia pestis CO92]
gi|145209729|gb|ABP39136.1| formyl transferase [Yersinia pestis Pestoides F]
gi|149292085|gb|EDM42159.1| probable formyl transferase [Yersinia pestis CA88-4125]
gi|162352724|gb|ABX86672.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
Angola]
gi|165912570|gb|EDR31201.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|165920563|gb|EDR37840.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. F1991016]
gi|165989280|gb|EDR41581.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166208272|gb|EDR52752.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. B42003004]
gi|166958885|gb|EDR55906.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167049810|gb|EDR61218.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Antiqua str. UG05-0454]
gi|167056028|gb|EDR65806.1| bifunctional polymyxin resistance ArnA protein [Yersinia pestis
biovar Mediaevalis str. K1973002]
gi|229680682|gb|EEO76778.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis Nepal516]
gi|229688054|gb|EEO80125.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Orientalis
str. India 195]
gi|229694311|gb|EEO84358.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229701867|gb|EEO89890.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis Pestoides A]
gi|262361619|gb|ACY58340.1| hypothetical protein YPD4_1432 [Yersinia pestis D106004]
gi|262365639|gb|ACY62196.1| hypothetical protein YPD8_1513 [Yersinia pestis D182038]
gi|270338975|gb|EFA49752.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis KIM D27]
gi|294354036|gb|ADE64377.1| hypothetical protein YPZ3_1467 [Yersinia pestis Z176003]
gi|320015075|gb|ADV98646.1| bifunctional UDP-L-Ara4N formyltransferase/UDP-GlcA
C-4'-decarboxylase [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|342854884|gb|AEL73437.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis A1122]
gi|391425286|gb|EIQ87575.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-01]
gi|391440668|gb|EIR01223.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-04]
gi|391442091|gb|EIR02520.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-05]
gi|391445577|gb|EIR05689.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-06]
gi|391457677|gb|EIR16600.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-07]
gi|391476212|gb|EIR33351.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-12]
gi|391490899|gb|EIR46507.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-15]
gi|391492831|gb|EIR48243.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-14]
gi|391521175|gb|EIR73665.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-29]
gi|391524460|gb|EIR76678.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-32]
gi|391541176|gb|EIR91741.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-45]
gi|391554363|gb|EIS03618.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-46]
gi|391569430|gb|EIS17017.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-52]
gi|391570372|gb|EIS17845.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-53]
gi|391577192|gb|EIS23652.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-54]
gi|391583060|gb|EIS28759.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-55]
gi|391586017|gb|EIS31361.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-56]
gi|391597280|gb|EIS41123.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-58]
gi|391599132|gb|EIS42784.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-60]
gi|391649287|gb|EIS86699.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-76]
gi|391662259|gb|EIS98214.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-90]
gi|391670294|gb|EIT05349.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-91]
gi|391679544|gb|EIT13666.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-93]
gi|391693459|gb|EIT26207.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-95]
gi|391698246|gb|EIT30570.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-98]
gi|391714158|gb|EIT44838.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-100]
gi|391714603|gb|EIT45243.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-101]
gi|391725652|gb|EIT55091.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-102]
gi|411175227|gb|EKS45253.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Yersinia pestis INS]
Length = 667
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 477 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 534 KRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFE--NHELR 591
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 592 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 651
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 652 A---AVIEKTAAP 661
>gi|420681157|ref|ZP_15165590.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-47]
gi|391554796|gb|EIS04011.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-47]
Length = 620
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 271 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 324
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 325 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 384
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 385 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 429
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 430 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 486
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 487 KRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFE--NHELR 544
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 545 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 604
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 605 A---AVIEKTAAP 614
>gi|365972570|ref|YP_004954131.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter cloacae EcWSU1]
gi|365751483|gb|AEW75710.1| Bifunctional polymyxin resistance protein ArnA [Enterobacter
cloacae EcWSU1]
Length = 660
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 190/363 (52%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLKDDNYEIYGLDIGADAISRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCTDKNF---DEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKAGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKEGRCNGEIINIGNPDNEASIRELAEMLLASFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S +YG+GY D + R P + + L W P + ++ TL +
Sbjct: 594 FPPFAGFRE----VESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPTVKMDQTIDETLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|261341975|ref|ZP_05969833.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Enterobacter cancerogenus ATCC 35316]
gi|288315885|gb|EFC54823.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Enterobacter cancerogenus ATCC 35316]
Length = 660
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 189/363 (52%), Gaps = 36/363 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDDNYEIYGLDIGSDAIGRFLDNP------RFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYDKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDN---------------NFDEDTSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+
Sbjct: 477 YGEKAGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYA------K 311
+R F I D IEA+ +IEN R NG I N+GNP NE ++R+LAEM+ + +
Sbjct: 534 KRCFTDISDGIEALFRIIENKDNRCNGEIINIGNPDNEASIRELAEMLLASFERHPLRDR 593
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A E V S +YG+GY D + R P + + L W P + ++ TL +
Sbjct: 594 FPPFAGFRE----VESSSYYGKGYQDVEHRKPSIRNAKRCLNWTPTIQMEQTIDETLDFF 649
Query: 372 HRT 374
RT
Sbjct: 650 LRT 652
>gi|420784763|ref|ZP_15256228.1| bifunctional polymyxin resistance protein ArnA, partial [Yersinia
pestis PY-89]
gi|391658225|gb|EIS94651.1| bifunctional polymyxin resistance protein ArnA, partial [Yersinia
pestis PY-89]
Length = 618
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 269 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 322
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 323 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 382
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 383 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 427
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 428 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 484
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 485 KRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFE--NHELR 542
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 543 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 602
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 603 A---AVIEKTAAP 612
>gi|417335134|ref|ZP_12118086.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
gi|353572511|gb|EHC36136.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Alachua str. R6-377]
Length = 660
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 197/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P++ + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPNIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|238787102|ref|ZP_04630902.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia frederiksenii ATCC 33641]
gi|238724890|gb|EEQ16530.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Yersinia frederiksenii ATCC 33641]
Length = 623
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 195/369 (52%), Gaps = 40/369 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 274 VLILGVNGFIGNHLTERLLRDDRYEVYGLDIGSDAISRFL------GNPYFHFVEGDISI 327
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 328 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 387
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED+S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 388 TSEVYG------------MCDDKEF---DEDSSRLIVGPINKQRWIYSVSKQLLDRVIWA 432
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 433 YGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 489
Query: 259 QRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN A +G I N+GNP NE ++R+LAE++ + + E
Sbjct: 490 KRCFTDIHDGIEALFRIIENRDDACDGQIINIGNPTNEASIRELAEILLSSFEQ--HELR 547
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY--- 370
P D+ S +YG+GY D + R P + + L W P+ +L + TL +
Sbjct: 548 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIALQQTVTETLDFFLR 607
Query: 371 -----QHRT 374
QH+T
Sbjct: 608 GVVQEQHQT 616
>gi|215487472|ref|YP_002329903.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O127:H6 str.
E2348/69]
gi|312967557|ref|ZP_07781772.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
2362-75]
gi|417756518|ref|ZP_12404593.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC2B]
gi|418997814|ref|ZP_13545408.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC1A]
gi|419002806|ref|ZP_13550333.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC1B]
gi|419008501|ref|ZP_13555932.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC1C]
gi|419019184|ref|ZP_13566491.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC1E]
gi|419024687|ref|ZP_13571913.1| polymyxin resistance protein ArnA [Escherichia coli DEC2A]
gi|419029725|ref|ZP_13576888.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC2C]
gi|419035470|ref|ZP_13582556.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC2D]
gi|419040413|ref|ZP_13587441.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC2E]
gi|254806284|sp|B7UFR7.1|ARNA_ECO27 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|215265544|emb|CAS09947.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O127:H6 str. E2348/69]
gi|312287754|gb|EFR15659.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
2362-75]
gi|377843641|gb|EHU08681.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC1A]
gi|377844019|gb|EHU09056.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC1C]
gi|377847685|gb|EHU12683.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC1B]
gi|377860238|gb|EHU25064.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC1E]
gi|377863471|gb|EHU28276.1| polymyxin resistance protein ArnA [Escherichia coli DEC2A]
gi|377873934|gb|EHU38565.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC2B]
gi|377877907|gb|EHU42496.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC2C]
gi|377879826|gb|EHU44398.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC2D]
gi|377890453|gb|EHU54910.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC2E]
Length = 660
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQLI+R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLIDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|398971741|ref|ZP_10683792.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM30]
gi|398138184|gb|EJM27210.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM30]
Length = 663
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I
Sbjct: 304 GSLLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIDRLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S I
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDKNF---DEDSSNLI 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D + R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRHNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMRETIGNTLDF 650
>gi|420585052|ref|ZP_15079104.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-08]
gi|420779170|ref|ZP_15251328.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-88]
gi|391458651|gb|EIR17497.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-08]
gi|391653541|gb|EIS90487.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-88]
Length = 538
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 189 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 242
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 243 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 302
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 303 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 347
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 348 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 404
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 405 KRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFE--NHELR 462
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 463 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 522
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 523 A---AVIEKTAAP 532
>gi|419014185|ref|ZP_13561535.1| polymyxin resistance protein ArnA [Escherichia coli DEC1D]
gi|377857038|gb|EHU21893.1| polymyxin resistance protein ArnA [Escherichia coli DEC1D]
Length = 660
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGGI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQLI+R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLIDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|415840559|ref|ZP_11521987.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
RN587/1]
gi|417282660|ref|ZP_12069960.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 3003]
gi|425278555|ref|ZP_18669801.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
ARS4.2123]
gi|425301119|ref|ZP_18691017.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
07798]
gi|323188016|gb|EFZ73311.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
RN587/1]
gi|386246989|gb|EII88719.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 3003]
gi|408202078|gb|EKI27212.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
ARS4.2123]
gi|408213505|gb|EKI37990.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
07798]
Length = 660
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQLI+R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLIDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|420590177|ref|ZP_15083717.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-09]
gi|420595565|ref|ZP_15088565.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-10]
gi|420725099|ref|ZP_15203775.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-59]
gi|391460902|gb|EIR19564.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-09]
gi|391473774|gb|EIR31120.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-10]
gi|391600911|gb|EIS44387.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-59]
Length = 620
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 271 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 324
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 325 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 384
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 385 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 429
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 430 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 486
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 487 KRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFE--NHELR 544
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 545 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 604
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 605 A---AVIEKTAAP 614
>gi|423204386|ref|ZP_17190942.1| bifunctional polymyxin resistance protein ARNA [Aeromonas veronii
AMC34]
gi|404627251|gb|EKB24056.1| bifunctional polymyxin resistance protein ARNA [Aeromonas veronii
AMC34]
Length = 663
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 193/365 (52%), Gaps = 34/365 (9%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF 72
R + + ++G GFIG+HL E++L + +++ LD+ + + + G F
Sbjct: 313 RKARLTRVLILGVNGFIGNHLTERLLKDGGYEVYGLDIGSSAVDRFI------GHPNFHF 366
Query: 73 HRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+I H +E IK D+ + L AI TP +Y PL +F + L +V+YC + N
Sbjct: 367 VEGDISIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYN 426
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + D ++ ED+S I G I KQRW Y+ +KQL
Sbjct: 427 KRIIFPSTSEVYG------------MCDDHSF---DEDSSRLIVGPINKQRWIYSVSKQL 471
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL FT+ RPFNW+GPR+D +D G R + NL+ P++
Sbjct: 472 LDRVIWAYGKKEGLNFTLFRPFNWMGPRLD---SLDSARIGSSRAITQLILNLVDGTPIQ 528
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
LVDGG +R F I+D IEA+ ++EN + R NG I N+GNP NE ++R++AE++ A
Sbjct: 529 LVDGGAQKRCFTDIEDGIEALFRIVENKSDRCNGQIINIGNPDNEASIREMAEVL---LA 585
Query: 311 KVSGEAALEE--PTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
K + P V SK FYG+GY D R P + + + W P + + +
Sbjct: 586 KFDAHPLRDHFPPFAGFKLVESKSFYGDGYQDVSHRRPSIRNARKLIDWEPTIEMEETIG 645
Query: 366 STLTY 370
TL +
Sbjct: 646 KTLDF 650
>gi|359782517|ref|ZP_09285738.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas psychrotolerans L19]
gi|359369784|gb|EHK70354.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas psychrotolerans L19]
Length = 659
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 206/390 (52%), Gaps = 43/390 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
+AGA + D R + + ++G GFIG+HL E++L + +++ LD+ +D I+ L
Sbjct: 301 VAGARLHRQ-DRRAKRRTRVLILGVNGFIGNHLSERLLADGEYEVYGLDIGSDAIERLKA 359
Query: 61 PESQTGADRIQFHRLNIK---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNF 117
+ FH + H LE IK D+ + L AI TP +Y PL +F
Sbjct: 360 NPN--------FHYVEGDISIHTEWLEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDF 411
Query: 118 IDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
+ L +V++C + KR+I ST EVYG + QD + ED S + G
Sbjct: 412 EENLKIVRHCVKYGKRVIFPSTSEVYG------------MCQDERF---DEDRSNLVVGP 456
Query: 178 IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237
I KQRW Y+ +KQL++R+I+A GA+ GL+FT+ RPFNW+GPR+D +D G R +
Sbjct: 457 INKQRWIYSVSKQLLDRVIWAYGAK-GLKFTLFRPFNWMGPRLD---RLDSARIGSSRAI 512
Query: 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEV 296
NL+ P+KLVDGG +R F + D IEA+ +IEN R +G I N+GNP NE
Sbjct: 513 TQLILNLVEGTPIKLVDGGAQKRCFTDVDDGIEALFRIIENQGGRCDGQIVNIGNPDNEA 572
Query: 297 TVRQLAEMMTEVYAKVSGEAALEE--PTV---DVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
++R+LAE E+ A+ E P +V SK FYG+GY D R P + +
Sbjct: 573 SIRELAE---ELLAQFEAHPLRHEFPPFAGFREVESKSFYGDGYQDVAHRKPSVENARRL 629
Query: 352 LGWNPKTSLWDLLESTLTYQHRTYAEAIKQ 381
+ W P T++ + TL + R EA+ Q
Sbjct: 630 IDWQPTTAMAATVGKTLDFFLR---EALAQ 656
>gi|377820622|ref|YP_004976993.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. YI23]
gi|357935457|gb|AET89016.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. YI23]
Length = 348
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 193/366 (52%), Gaps = 31/366 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ D++ L E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLANHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPENSVLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A+G I+N+GNP N +VR+LA M + ++
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKDGVASGKIYNIGNPTNNFSVRELANKMLALANQIPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
E+A + V+ SS +YG GY D R+P + Q+LGW P+ S+ D L
Sbjct: 278 ESAKKVQLVETSSGAYYGAGYQDVQNRVPKIDNTMQELGWKPEASMDDALRKIFEAYRAH 337
Query: 375 YAEAIK 380
EA K
Sbjct: 338 VGEARK 343
>gi|307311182|ref|ZP_07590826.1| NAD-dependent epimerase/dehydratase [Escherichia coli W]
gi|378712308|ref|YP_005277201.1| NAD-dependent epimerase/dehydratase [Escherichia coli KO11FL]
gi|386609633|ref|YP_006125119.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli W]
gi|386700769|ref|YP_006164606.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli KO11FL]
gi|386710119|ref|YP_006173840.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli W]
gi|306908688|gb|EFN39185.1| NAD-dependent epimerase/dehydratase [Escherichia coli W]
gi|315061550|gb|ADT75877.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli W]
gi|323377869|gb|ADX50137.1| NAD-dependent epimerase/dehydratase [Escherichia coli KO11FL]
gi|383392296|gb|AFH17254.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli KO11FL]
gi|383405811|gb|AFH12054.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli W]
Length = 660
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 190/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + +KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYHKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|398910753|ref|ZP_10655194.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM49]
gi|398185279|gb|EJM72692.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM49]
Length = 663
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDNNF---DEDSSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + A D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRANFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWTPTVEMSETIGNTLDF 650
>gi|420601211|ref|ZP_15093595.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-11]
gi|420627812|ref|ZP_15117414.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-16]
gi|420660011|ref|ZP_15146451.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-36]
gi|420665324|ref|ZP_15151214.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-42]
gi|420686454|ref|ZP_15170316.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-48]
gi|420746793|ref|ZP_15223047.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-64]
gi|420800541|ref|ZP_15270376.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-92]
gi|420811232|ref|ZP_15280028.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-94]
gi|420822097|ref|ZP_15289807.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-96]
gi|391475381|gb|EIR32590.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-11]
gi|391505243|gb|EIR59272.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-16]
gi|391536470|gb|EIR87453.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-36]
gi|391539225|gb|EIR89966.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-42]
gi|391556063|gb|EIS05180.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-48]
gi|391618705|gb|EIS60083.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-64]
gi|391680812|gb|EIT14829.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-92]
gi|391681641|gb|EIT15585.1| NAD dependent epimerase/dehydratase family protein [Yersinia pestis
PY-94]
gi|391696649|gb|EIT29117.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-96]
Length = 581
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 232 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 285
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 286 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 345
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 346 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 390
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 391 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 447
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 448 KRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFE--NHELR 505
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 506 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 565
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 566 A---AVIEKTAAP 575
>gi|420552689|ref|ZP_15050018.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-02]
gi|420558230|ref|ZP_15054875.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-03]
gi|420632920|ref|ZP_15122014.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-19]
gi|420638135|ref|ZP_15126691.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-25]
gi|420654524|ref|ZP_15141521.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-34]
gi|420735727|ref|ZP_15213338.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-61]
gi|420741204|ref|ZP_15218261.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-63]
gi|420752356|ref|ZP_15227940.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-65]
gi|420757938|ref|ZP_15232549.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-66]
gi|420763402|ref|ZP_15237215.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-71]
gi|420768600|ref|ZP_15241894.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-72]
gi|420832876|ref|ZP_15299513.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-99]
gi|420859430|ref|ZP_15323073.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-113]
gi|391426735|gb|EIQ88899.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-02]
gi|391427568|gb|EIQ89644.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-03]
gi|391506107|gb|EIR60059.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-19]
gi|391510744|gb|EIR64246.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-25]
gi|391523422|gb|EIR75734.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-34]
gi|391613784|gb|EIS55718.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-61]
gi|391614327|gb|EIS56207.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-63]
gi|391626290|gb|EIS66670.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-65]
gi|391633889|gb|EIS73234.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-66]
gi|391637224|gb|EIS76169.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-71]
gi|391639750|gb|EIS78392.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-72]
gi|391708947|gb|EIT40165.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-99]
gi|391734194|gb|EIT62478.1| bifunctional polymyxin resistance protein ArnA [Yersinia pestis
PY-113]
Length = 602
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 195/373 (52%), Gaps = 35/373 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + +++ LD+ +D I L G F +I
Sbjct: 253 VLILGVNGFIGNHLTERLLQDDRYEVYGLDIGSDAISRFL------GNPAFHFVEGDISI 306
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+ C + NKR++ S
Sbjct: 307 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIVFPS 366
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 367 TSEVYG------------MCDDKEF---DEDTSRLIVGPINKQRWIYSVSKQLLDRVIWA 411
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG
Sbjct: 412 YGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQ 468
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E
Sbjct: 469 KRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFE--NHELR 526
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P D+ S +YG+GY D + R P + + L W P+ ++ + TL + R
Sbjct: 527 DHFPPFAGFKDIESSAYYGKGYQDVEYRTPSIKNARRILHWQPEIAMQQTVTETLDFFLR 586
Query: 374 TYAEAIKQAVAKP 386
A+ + A P
Sbjct: 587 A---AVIEKTAAP 596
>gi|437173969|ref|ZP_20702040.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
gi|435158201|gb|ELN44612.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_56-3991]
Length = 637
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 291 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 343
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 344 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 403
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 404 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 447
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 448 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 504
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 505 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 564
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 565 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 623
Query: 369 TYQHRT 374
+ R+
Sbjct: 624 DFFLRS 629
>gi|402700753|ref|ZP_10848732.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fragi A22]
Length = 661
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/381 (33%), Positives = 198/381 (51%), Gaps = 43/381 (11%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+ G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 300 VEGSRLRGSESGRKARRTRVLILGVNGFIGNHLSERLLQDDQYEVYGLDIGSDAIERLRS 359
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 360 HPNFHFVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 406
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 407 FELDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDKNF---DEDTSN 451
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 452 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLKFTLFRPFNWMGPRLD---RLDSARVG 507
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGN 291
R + +L+ P++LVDGG+ +R F + D IEA+ +I+N + +G I N+GN
Sbjct: 508 SSRAITQLILHLVEGTPIRLVDGGEQKRCFTDVADGIEALARIIDNKGGKCDGQIINIGN 567
Query: 292 PHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIIN 349
P NE ++R+L E + + + DV S+ FYG GY D R P +
Sbjct: 568 PENEASIRELGEELLRQFEAHPLRDNFPPFAGFRDVESQSFYGTGYQDVSHRKPSVENAR 627
Query: 350 QQLGWNPKTSLWDLLESTLTY 370
+ + W P T L + + TL +
Sbjct: 628 RLIDWTPTTELSETIGKTLDF 648
>gi|304398783|ref|ZP_07380654.1| NAD-dependent epimerase/dehydratase [Pantoea sp. aB]
gi|440758442|ref|ZP_20937608.1| Polymyxin resistance protein ArnA, UDP-glucuronic acid
decarboxylase [Pantoea agglomerans 299R]
gi|304353730|gb|EFM18106.1| NAD-dependent epimerase/dehydratase [Pantoea sp. aB]
gi|436427771|gb|ELP25442.1| Polymyxin resistance protein ArnA, UDP-glucuronic acid
decarboxylase [Pantoea agglomerans 299R]
Length = 659
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 194/360 (53%), Gaps = 30/360 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I LE R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDEHFEVYGLDISSDAISRFLE------HPRFHFVEGDIAI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPS 431
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T SF ED+S + G I KQRW Y+ +KQL++R+I+
Sbjct: 432 TSEVYGMCTDASF----------------DEDSSNLVVGPINKQRWIYSVSKQLLDRVIW 475
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 476 AYGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGK 532
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSG 314
+R F I+D +EA+ +IEN + +G I N+GNP NE ++++LAE + + + +
Sbjct: 533 QKRCFTDIQDGVEALFRIIENKQQNCDGQIINIGNPDNEASIKELAEQLLASFERHPLRS 592
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+ +V S +YG+GY D + R P + + LGW P ++ +++TL + RT
Sbjct: 593 QFPPFAGFREVESSSYYGKGYQDVEHRKPAIRNARRLLGWTPTVTMDVTIDNTLDFFLRT 652
>gi|218700729|ref|YP_002408358.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli IAI39]
gi|386624958|ref|YP_006144686.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O7:K1 str. CE10]
gi|226723710|sp|B7NNT4.1|ARNA_ECO7I RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218370715|emb|CAR18528.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli IAI39]
gi|349738695|gb|AEQ13401.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O7:K1 str. CE10]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 191/370 (51%), Gaps = 34/370 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RTYAEAIKQA 382
RT KQ+
Sbjct: 651 RTVDLTDKQS 660
>gi|417708302|ref|ZP_12357335.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
VA-6]
gi|420332066|ref|ZP_14833722.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
K-1770]
gi|333001402|gb|EGK20970.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
VA-6]
gi|391250961|gb|EIQ10180.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
K-1770]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDFVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|83287939|sp|P0C0R6.1|ARNA_SALCH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D + G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLSAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V+S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVASRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|398854227|ref|ZP_10610801.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM80]
gi|398236725|gb|EJN22498.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM80]
Length = 663
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSLLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 HFHYVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDKHF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDGDVCNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D + R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRDNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWTPTVEMRETIGNTLDF 650
>gi|398944493|ref|ZP_10671272.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM41(2012)]
gi|398158066|gb|EJM46427.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM41(2012)]
Length = 663
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/379 (34%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVILPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S I
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQNF---DEDTSNLI 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSISKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRDNFPPFAGFRDVESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWTPTVEMSETIGNTLDF 650
>gi|417828680|ref|ZP_12475231.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri J1713]
gi|420321154|ref|ZP_14822983.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
2850-71]
gi|335574535|gb|EGM60853.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri J1713]
gi|391247675|gb|EIQ06921.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
2850-71]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|437833431|ref|ZP_20844695.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
gi|435302135|gb|ELO78122.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SARB17]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLHVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|437433446|ref|ZP_20756277.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
gi|435214147|gb|ELN96981.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 40-18]
Length = 526
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 180 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 232
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 233 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 292
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 293 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 336
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 337 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 393
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 394 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 453
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 454 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 512
Query: 369 TYQHRT 374
+ R+
Sbjct: 513 DFFLRS 518
>gi|194445983|ref|YP_002041560.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|418805263|ref|ZP_13360851.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|418813990|ref|ZP_13369510.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|418814473|ref|ZP_13369987.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|418819438|ref|ZP_13374889.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|418832217|ref|ZP_13387159.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|418838512|ref|ZP_13393356.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|418839270|ref|ZP_13394107.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|418847189|ref|ZP_13401951.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|418852162|ref|ZP_13406867.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|418856605|ref|ZP_13411247.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|418858722|ref|ZP_13413334.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|418865028|ref|ZP_13419543.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|418867235|ref|ZP_13421695.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
gi|226723725|sp|B4SYX1.1|ARNA_SALNS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|194404646|gb|ACF64868.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|392772324|gb|EJA29025.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22513]
gi|392784964|gb|EJA41545.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21550]
gi|392794267|gb|EJA50690.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21538]
gi|392794729|gb|EJA51121.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 22425]
gi|392796025|gb|EJA52375.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N1543]
gi|392797736|gb|EJA54034.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM N18486]
gi|392808952|gb|EJA64999.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19443]
gi|392812981|gb|EJA68956.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21554]
gi|392815692|gb|EJA71628.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 37978]
gi|392819114|gb|EJA74987.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19593]
gi|392829114|gb|EJA84795.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19536]
gi|392831980|gb|EJA87605.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19470]
gi|392839655|gb|EJA95194.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 4176]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|422771897|ref|ZP_16825586.1| NAD dependent epimerase/dehydratase [Escherichia coli E482]
gi|323941049|gb|EGB37236.1| NAD dependent epimerase/dehydratase [Escherichia coli E482]
Length = 650
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 308 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 359
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 360 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 419
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 420 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 464
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 465 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 521
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 522 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 581
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 582 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 640
Query: 373 RT 374
RT
Sbjct: 641 RT 642
>gi|432851545|ref|ZP_20081930.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE144]
gi|431399883|gb|ELG83273.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE144]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E IK D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|224583216|ref|YP_002637014.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|254806288|sp|C0Q069.1|ARNA_SALPC RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|224467743|gb|ACN45573.1| hypothetical protein SPC_1412 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|417231471|ref|ZP_12032869.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 5.0959]
gi|386204470|gb|EII08981.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 5.0959]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|419233218|ref|ZP_13775994.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9B]
gi|419238561|ref|ZP_13781276.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9C]
gi|419244027|ref|ZP_13786665.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9D]
gi|378076960|gb|EHW38958.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9B]
gi|378083600|gb|EHW45531.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9C]
gi|378089963|gb|EHW51803.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9D]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|134035392|sp|Q32DT3.2|ARNA_SHIDS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432671327|ref|ZP_19906856.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE119]
gi|431210246|gb|ELF08308.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE119]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|417629519|ref|ZP_12279756.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_MHI813]
gi|345372266|gb|EGX04230.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_MHI813]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 195/376 (51%), Gaps = 38/376 (10%)
Query: 10 LDGRPI----KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L+ +P+ + + ++G GFIG+HL E++L E +++ LD+ +D I L
Sbjct: 304 LNSQPVCTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------ 357
Query: 66 GADRIQFHRLNIK---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
+ FH + H +E +K D+ + L AI TP +Y PL +F + L
Sbjct: 358 --NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLR 415
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+++YC + KR+I ST EVYG + ED S I G + K R
Sbjct: 416 IIRYCVKYRKRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPR 460
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
W Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R +
Sbjct: 461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLIL 517
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQL 301
NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L
Sbjct: 518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEEL 577
Query: 302 AEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
EM+ + K P V S +YG+GY D + R P + ++ L W PK
Sbjct: 578 GEMLLASFEKHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKI 636
Query: 359 SLWDLLESTLTYQHRT 374
+ + ++ TL + RT
Sbjct: 637 DMQETIDETLDFFLRT 652
>gi|416343814|ref|ZP_11677714.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli EC4100B]
gi|320199846|gb|EFW74435.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli EC4100B]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|416335443|ref|ZP_11672136.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli WV_060327]
gi|320196126|gb|EFW70750.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli WV_060327]
Length = 660
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 190/368 (51%), Gaps = 46/368 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---- 311
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 312 -----VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+G +E S +YG+GY D + R P + + L W PK + + ++
Sbjct: 592 HYFPPFAGFRVVE-------SSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDE 644
Query: 367 TLTYQHRT 374
TL + RT
Sbjct: 645 TLDFFLRT 652
>gi|417713309|ref|ZP_12362275.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-272]
gi|417718149|ref|ZP_12367048.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-227]
gi|333002624|gb|EGK22184.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-272]
gi|333016765|gb|EGK36093.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-227]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|331653697|ref|ZP_08354698.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli M718]
gi|331048546|gb|EGI20622.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli M718]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|417254242|ref|ZP_12045998.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 4.0967]
gi|419290195|ref|ZP_13832287.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC11A]
gi|419295521|ref|ZP_13837567.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC11B]
gi|378129996|gb|EHW91366.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC11A]
gi|378142608|gb|EHX03810.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC11B]
gi|386216169|gb|EII32661.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 4.0967]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLTSFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|331647913|ref|ZP_08349005.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli M605]
gi|417662867|ref|ZP_12312448.1| polymyxin resistance protein ArnA [Escherichia coli AA86]
gi|330912085|gb|EGH40595.1| polymyxin resistance protein ArnA [Escherichia coli AA86]
gi|331043637|gb|EGI15775.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli M605]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|300818146|ref|ZP_07098358.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 107-1]
gi|415879204|ref|ZP_11544625.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 79-10]
gi|432806405|ref|ZP_20040333.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE91]
gi|432935039|ref|ZP_20134476.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE184]
gi|433194326|ref|ZP_20378316.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE90]
gi|300529290|gb|EFK50352.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 107-1]
gi|342926970|gb|EGU95692.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 79-10]
gi|431354547|gb|ELG41273.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE91]
gi|431453207|gb|ELH33617.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE184]
gi|431715776|gb|ELJ79921.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE90]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|157159038|ref|YP_001463602.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E24377A]
gi|193062414|ref|ZP_03043509.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E22]
gi|194427214|ref|ZP_03059765.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B171]
gi|209919705|ref|YP_002293789.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SE11]
gi|218554814|ref|YP_002387727.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli IAI1]
gi|218695857|ref|YP_002403524.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 55989]
gi|260844847|ref|YP_003222625.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O103:H2 str. 12009]
gi|260856301|ref|YP_003230192.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str. 11368]
gi|293446595|ref|ZP_06663017.1| bifunctional polymyxin resistance protein aRNA [Escherichia coli
B088]
gi|300822127|ref|ZP_07102269.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 119-7]
gi|331668956|ref|ZP_08369804.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA271]
gi|331678204|ref|ZP_08378879.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H591]
gi|332278595|ref|ZP_08391008.1| bifunctional polymyxin resistance protein aRNA [Shigella sp. D9]
gi|407470138|ref|YP_006783419.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407481199|ref|YP_006778348.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
2011C-3493]
gi|410481746|ref|YP_006769292.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415784104|ref|ZP_11492067.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
EPECa14]
gi|415798443|ref|ZP_11498440.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
E128010]
gi|415829055|ref|ZP_11515438.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
OK1357]
gi|417135767|ref|ZP_11980552.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 5.0588]
gi|417163763|ref|ZP_11998951.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 99.0741]
gi|417173594|ref|ZP_12003390.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 3.2608]
gi|417182641|ref|ZP_12009198.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 93.0624]
gi|417208724|ref|ZP_12020455.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli JB1-95]
gi|417221898|ref|ZP_12025338.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 96.154]
gi|417269239|ref|ZP_12056599.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 3.3884]
gi|417299861|ref|ZP_12087088.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 900105 (10e)]
gi|417597569|ref|ZP_12248210.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
3030-1]
gi|417608896|ref|ZP_12259399.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_DG131-3]
gi|417624147|ref|ZP_12274446.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_H.1.8]
gi|417805812|ref|ZP_12452761.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
LB226692]
gi|417833552|ref|ZP_12480000.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
01-09591]
gi|417863424|ref|ZP_12508472.1| hypothetical protein C22711_0357 [Escherichia coli O104:H4 str.
C227-11]
gi|418942813|ref|ZP_13496060.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H43 str. T22]
gi|419204256|ref|ZP_13747438.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC8B]
gi|419210464|ref|ZP_13753541.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC8C]
gi|419216336|ref|ZP_13759336.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC8D]
gi|419222264|ref|ZP_13765186.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC8E]
gi|419227508|ref|ZP_13770364.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9A]
gi|419249851|ref|ZP_13792434.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9E]
gi|419255717|ref|ZP_13798233.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10A]
gi|419261940|ref|ZP_13804357.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10B]
gi|419268076|ref|ZP_13810428.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10C]
gi|419273429|ref|ZP_13815724.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10D]
gi|419278760|ref|ZP_13821007.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10E]
gi|419284942|ref|ZP_13827115.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10F]
gi|419300982|ref|ZP_13842981.1| polymyxin resistance protein ArnA [Escherichia coli DEC11C]
gi|419307115|ref|ZP_13849014.1| polymyxin resistance protein ArnA [Escherichia coli DEC11D]
gi|419312120|ref|ZP_13853982.1| polymyxin resistance protein ArnA [Escherichia coli DEC11E]
gi|419317532|ref|ZP_13859335.1| polymyxin resistance protein ArnA [Escherichia coli DEC12A]
gi|419323708|ref|ZP_13865401.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC12B]
gi|419329672|ref|ZP_13871276.1| polymyxin resistance protein ArnA [Escherichia coli DEC12C]
gi|419335235|ref|ZP_13876768.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC12D]
gi|419340702|ref|ZP_13882166.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC12E]
gi|419345924|ref|ZP_13887298.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13A]
gi|419350337|ref|ZP_13891675.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13B]
gi|419355805|ref|ZP_13897062.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13C]
gi|419360900|ref|ZP_13902117.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13D]
gi|419365950|ref|ZP_13907111.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13E]
gi|419370754|ref|ZP_13911873.1| polymyxin resistance protein ArnA [Escherichia coli DEC14A]
gi|419376191|ref|ZP_13917215.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC14B]
gi|419381525|ref|ZP_13922476.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC14C]
gi|419386830|ref|ZP_13927708.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC14D]
gi|419392345|ref|ZP_13933157.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15A]
gi|419397383|ref|ZP_13938151.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15B]
gi|419402725|ref|ZP_13943449.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15C]
gi|419407843|ref|ZP_13948532.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15D]
gi|419413430|ref|ZP_13954082.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15E]
gi|419807732|ref|ZP_14332760.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli AI27]
gi|419870618|ref|ZP_14392711.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O103:H2 str.
CVM9450]
gi|419876117|ref|ZP_14397887.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|419880873|ref|ZP_14402238.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CVM9545]
gi|419901332|ref|ZP_14420691.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM9942]
gi|419908974|ref|ZP_14427609.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM10026]
gi|419950554|ref|ZP_14466766.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli CUMT8]
gi|420102147|ref|ZP_14613172.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|420108444|ref|ZP_14618699.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|420116763|ref|ZP_14626140.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM10021]
gi|420125075|ref|ZP_14633910.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM10224]
gi|420133660|ref|ZP_14641863.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM9952]
gi|420391982|ref|ZP_14891235.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli EPEC C342-62]
gi|422351013|ref|ZP_16431859.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 117-3]
gi|422988371|ref|ZP_16979144.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. C227-11]
gi|422995262|ref|ZP_16986026.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. C236-11]
gi|423000336|ref|ZP_16991090.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 09-7901]
gi|423004005|ref|ZP_16994751.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 04-8351]
gi|423010579|ref|ZP_17001313.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-3677]
gi|423019806|ref|ZP_17010515.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4404]
gi|423024973|ref|ZP_17015670.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4522]
gi|423030794|ref|ZP_17021482.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4623]
gi|423038620|ref|ZP_17029294.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|423043739|ref|ZP_17034406.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|423045468|ref|ZP_17036128.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|423054007|ref|ZP_17042814.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|423060982|ref|ZP_17049778.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|424753084|ref|ZP_18181049.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424761964|ref|ZP_18189493.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|425380314|ref|ZP_18764352.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1865]
gi|425423071|ref|ZP_18804239.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
0.1288]
gi|429719851|ref|ZP_19254782.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429771734|ref|ZP_19303756.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02030]
gi|429776676|ref|ZP_19308655.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429785406|ref|ZP_19317303.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02092]
gi|429791296|ref|ZP_19323152.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02093]
gi|429797123|ref|ZP_19328930.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02281]
gi|429798720|ref|ZP_19330520.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02318]
gi|429807233|ref|ZP_19338959.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02913]
gi|429812133|ref|ZP_19343818.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-03439]
gi|429817654|ref|ZP_19349294.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-04080]
gi|429822865|ref|ZP_19354462.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-03943]
gi|429904243|ref|ZP_19370222.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429908380|ref|ZP_19374344.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429914251|ref|ZP_19380199.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429919282|ref|ZP_19385214.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429925101|ref|ZP_19391015.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429929038|ref|ZP_19394940.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429935577|ref|ZP_19401463.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429941257|ref|ZP_19407131.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429943937|ref|ZP_19409800.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429951537|ref|ZP_19417383.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429954849|ref|ZP_19420681.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec12-0466]
gi|432377418|ref|ZP_19620409.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE12]
gi|432765642|ref|ZP_20000080.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE48]
gi|432809905|ref|ZP_20043798.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE101]
gi|432832275|ref|ZP_20065849.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE135]
gi|432835235|ref|ZP_20068774.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE136]
gi|432968354|ref|ZP_20157269.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE203]
gi|166988213|sp|A7ZP73.1|ARNA_ECO24 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723711|sp|B7M5T7.1|ARNA_ECO8A RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723714|sp|B6I7J8.1|ARNA_ECOSE RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|254806285|sp|B7LAS0.1|ARNA_ECO55 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|157081068|gb|ABV20776.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E24377A]
gi|192932080|gb|EDV84679.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli E22]
gi|194414835|gb|EDX31106.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B171]
gi|209912964|dbj|BAG78038.1| putative formyltransferase [Escherichia coli SE11]
gi|218352589|emb|CAU98370.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli 55989]
gi|218361582|emb|CAQ99174.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli IAI1]
gi|257754950|dbj|BAI26452.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O26:H11 str. 11368]
gi|257759994|dbj|BAI31491.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli O103:H2 str. 12009]
gi|291323425|gb|EFE62853.1| bifunctional polymyxin resistance protein aRNA [Escherichia coli
B088]
gi|300525257|gb|EFK46326.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 119-7]
gi|323156405|gb|EFZ42560.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
EPECa14]
gi|323161664|gb|EFZ47548.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
E128010]
gi|323184128|gb|EFZ69505.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
OK1357]
gi|324020925|gb|EGB90144.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 117-3]
gi|331064150|gb|EGI36061.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA271]
gi|331074664|gb|EGI45984.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H591]
gi|332100947|gb|EGJ04293.1| bifunctional polymyxin resistance protein aRNA [Shigella sp. D9]
gi|340734434|gb|EGR63564.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
01-09591]
gi|340739724|gb|EGR73956.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
LB226692]
gi|341916713|gb|EGT66330.1| hypothetical protein C22711_0357 [Escherichia coli O104:H4 str.
C227-11]
gi|345353557|gb|EGW85789.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
3030-1]
gi|345358105|gb|EGW90293.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_DG131-3]
gi|345377108|gb|EGX09040.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_H.1.8]
gi|354862097|gb|EHF22535.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. C236-11]
gi|354867382|gb|EHF27804.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. C227-11]
gi|354869452|gb|EHF29862.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 04-8351]
gi|354873307|gb|EHF33684.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 09-7901]
gi|354880062|gb|EHF40398.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-3677]
gi|354889486|gb|EHF49735.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4404]
gi|354893081|gb|EHF53285.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4522]
gi|354895218|gb|EHF55407.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C1]
gi|354897492|gb|EHF57650.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4623]
gi|354898853|gb|EHF59004.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C2]
gi|354912904|gb|EHF72902.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C5]
gi|354915909|gb|EHF75885.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C3]
gi|354917824|gb|EHF77786.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-4632 C4]
gi|375321867|gb|EHS67665.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H43 str. T22]
gi|378048081|gb|EHW10437.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC8B]
gi|378053160|gb|EHW15460.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC8C]
gi|378061350|gb|EHW23535.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC8D]
gi|378065353|gb|EHW27501.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC8E]
gi|378074183|gb|EHW36222.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9A]
gi|378094873|gb|EHW56664.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC9E]
gi|378099656|gb|EHW61359.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10A]
gi|378105630|gb|EHW67269.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10B]
gi|378110727|gb|EHW72321.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10C]
gi|378115916|gb|EHW77449.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10D]
gi|378128185|gb|EHW89570.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10E]
gi|378131282|gb|EHW92640.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC10F]
gi|378148098|gb|EHX09238.1| polymyxin resistance protein ArnA [Escherichia coli DEC11D]
gi|378150598|gb|EHX11713.1| polymyxin resistance protein ArnA [Escherichia coli DEC11C]
gi|378157748|gb|EHX18779.1| polymyxin resistance protein ArnA [Escherichia coli DEC11E]
gi|378164784|gb|EHX25725.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC12B]
gi|378169115|gb|EHX30015.1| polymyxin resistance protein ArnA [Escherichia coli DEC12A]
gi|378169988|gb|EHX30874.1| polymyxin resistance protein ArnA [Escherichia coli DEC12C]
gi|378182314|gb|EHX42967.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC12D]
gi|378185372|gb|EHX45997.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13A]
gi|378187613|gb|EHX48224.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC12E]
gi|378200067|gb|EHX60523.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13C]
gi|378200515|gb|EHX60970.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13B]
gi|378202547|gb|EHX62974.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13D]
gi|378212259|gb|EHX72582.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC13E]
gi|378217348|gb|EHX77627.1| polymyxin resistance protein ArnA [Escherichia coli DEC14A]
gi|378218914|gb|EHX79183.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC14B]
gi|378227892|gb|EHX88060.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC14C]
gi|378231357|gb|EHX91468.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC14D]
gi|378237545|gb|EHX97568.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15A]
gi|378243504|gb|EHY03450.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15B]
gi|378247259|gb|EHY07178.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15C]
gi|378254222|gb|EHY14086.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15D]
gi|378258862|gb|EHY18678.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC15E]
gi|384469261|gb|EIE53444.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli AI27]
gi|386153621|gb|EIH04910.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 5.0588]
gi|386172988|gb|EIH45002.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 99.0741]
gi|386176286|gb|EIH53765.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 3.2608]
gi|386184494|gb|EIH67233.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 93.0624]
gi|386196685|gb|EIH90905.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli JB1-95]
gi|386201700|gb|EII00691.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 96.154]
gi|386228044|gb|EII55400.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 3.3884]
gi|386256696|gb|EIJ12190.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 900105 (10e)]
gi|388339419|gb|EIL05804.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O103:H2 str.
CVM9450]
gi|388345384|gb|EIL11155.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CVM9534]
gi|388367165|gb|EIL30859.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CVM9545]
gi|388373935|gb|EIL37158.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM10026]
gi|388376306|gb|EIL39241.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM9942]
gi|388416655|gb|EIL76536.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli CUMT8]
gi|391312663|gb|EIQ70271.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli EPEC C342-62]
gi|394396104|gb|EJE72484.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM10224]
gi|394403054|gb|EJE78730.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM10021]
gi|394409845|gb|EJE84302.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CVM9553]
gi|394412596|gb|EJE86726.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CVM9455]
gi|394424792|gb|EJE97863.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CVM9952]
gi|406776908|gb|AFS56332.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053496|gb|AFS73547.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
2011C-3493]
gi|407066173|gb|AFS87220.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408296380|gb|EKJ14621.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1865]
gi|408343626|gb|EKJ58020.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
0.1288]
gi|421936130|gb|EKT93798.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421941839|gb|EKT99215.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H11 str.
CFSAN001630]
gi|429348582|gb|EKY85343.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02092]
gi|429359991|gb|EKY96651.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02030]
gi|429361801|gb|EKY98453.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02093]
gi|429362073|gb|EKY98721.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02281]
gi|429362649|gb|EKY99295.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02033-1]
gi|429364963|gb|EKZ01580.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02318]
gi|429375694|gb|EKZ12227.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-02913]
gi|429378988|gb|EKZ15494.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-03439]
gi|429380339|gb|EKZ16830.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-03943]
gi|429391870|gb|EKZ28272.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. 11-04080]
gi|429405255|gb|EKZ41521.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-4984]
gi|429407021|gb|EKZ43275.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-9990]
gi|429410769|gb|EKZ46990.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-9450]
gi|429414481|gb|EKZ50656.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-4987]
gi|429421090|gb|EKZ57212.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-4986]
gi|429429424|gb|EKZ65493.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-5604]
gi|429432111|gb|EKZ68151.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-4988]
gi|429436317|gb|EKZ72333.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-5603]
gi|429438522|gb|EKZ74515.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-6006]
gi|429448144|gb|EKZ84061.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec12-0465]
gi|429451144|gb|EKZ87035.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec11-9941]
gi|429457806|gb|EKZ93644.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
O104:H4 str. Ec12-0466]
gi|430898717|gb|ELC20850.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE12]
gi|431309817|gb|ELF98010.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE48]
gi|431362673|gb|ELG49251.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE101]
gi|431376245|gb|ELG61568.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE135]
gi|431385595|gb|ELG69582.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE136]
gi|431471471|gb|ELH51364.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE203]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432398082|ref|ZP_19640863.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE25]
gi|432723706|ref|ZP_19958626.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE17]
gi|432728293|ref|ZP_19963172.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE18]
gi|432741987|ref|ZP_19976706.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE23]
gi|432991294|ref|ZP_20179958.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE217]
gi|433111505|ref|ZP_20297370.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE150]
gi|430916186|gb|ELC37264.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE25]
gi|431266260|gb|ELF57822.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE17]
gi|431273982|gb|ELF65056.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE18]
gi|431283678|gb|ELF74537.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE23]
gi|431495376|gb|ELH74962.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE217]
gi|431628809|gb|ELI97185.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE150]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|16130190|ref|NP_416758.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. MG1655]
gi|170019431|ref|YP_001724385.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli ATCC 8739]
gi|170081873|ref|YP_001731193.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli str. K-12 substr.
DH10B]
gi|188492513|ref|ZP_02999783.1| bifunctional polymyxin resistance arnA protein [Escherichia coli
53638]
gi|194436241|ref|ZP_03068343.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 101-1]
gi|238901429|ref|YP_002927225.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli BW2952]
gi|251785616|ref|YP_002999920.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase, subunit of UDP-GlcA
C-4''-decarboxylase / UDP-L-Ara4N formyltransferase
[Escherichia coli BL21(DE3)]
gi|253772821|ref|YP_003035652.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254162266|ref|YP_003045374.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B str. REL606]
gi|254289027|ref|YP_003054775.1| hypothetical protein ECD_02181 [Escherichia coli BL21(DE3)]
gi|300948958|ref|ZP_07163018.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 116-1]
gi|300958945|ref|ZP_07171048.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 175-1]
gi|301026887|ref|ZP_07190286.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 196-1]
gi|301647652|ref|ZP_07247446.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 146-1]
gi|312973488|ref|ZP_07787660.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
1827-70]
gi|386281325|ref|ZP_10058987.1| bifunctional polymyxin resistance protein ARNA [Escherichia sp.
4_1_40B]
gi|386594964|ref|YP_006091364.1| NAD-dependent epimerase/dehydratase [Escherichia coli DH1]
gi|387612829|ref|YP_006115945.1| bifunctional polymyxin resistance protein [includes:
UDP-4-amino-4-deoxy-l-arabinose formyltransferase;
UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating] [Escherichia coli ETEC H10407]
gi|387621965|ref|YP_006129592.1| bifunctional UDP-glucuronic
aciddecarboxylase/UDP-4-amino-4-deoxy-L-
arabinoseformyltransferase [Escherichia coli DH1]
gi|388478302|ref|YP_490494.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. W3110]
gi|404375607|ref|ZP_10980791.1| bifunctional polymyxin resistance protein ARNA [Escherichia sp.
1_1_43]
gi|417259953|ref|ZP_12047476.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 2.3916]
gi|417273019|ref|ZP_12060368.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 2.4168]
gi|417277583|ref|ZP_12064906.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 3.2303]
gi|417290798|ref|ZP_12078079.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli B41]
gi|417613730|ref|ZP_12264188.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_EH250]
gi|417618855|ref|ZP_12269269.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
G58-1]
gi|417635191|ref|ZP_12285404.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_S1191]
gi|417946966|ref|ZP_12590171.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli XH140A]
gi|417975433|ref|ZP_12616232.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli XH001]
gi|418303650|ref|ZP_12915444.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
UMNF18]
gi|418957372|ref|ZP_13509296.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
J53]
gi|419143197|ref|ZP_13687935.1| polymyxin resistance protein ArnA [Escherichia coli DEC6A]
gi|419149054|ref|ZP_13693707.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC6B]
gi|419159937|ref|ZP_13704442.1| polymyxin resistance protein ArnA [Escherichia coli DEC6D]
gi|419165061|ref|ZP_13709518.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC6E]
gi|419175982|ref|ZP_13719798.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC7B]
gi|419809986|ref|ZP_14334869.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O32:H37 str. P4]
gi|419938914|ref|ZP_14455719.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 75]
gi|421774446|ref|ZP_16211058.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
AD30]
gi|422766867|ref|ZP_16820594.1| NAD dependent epimerase/dehydratase [Escherichia coli E1520]
gi|422786874|ref|ZP_16839613.1| NAD dependent epimerase/dehydratase [Escherichia coli H489]
gi|422790486|ref|ZP_16843190.1| NAD dependent epimerase/dehydratase [Escherichia coli TA007]
gi|422819568|ref|ZP_16867779.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
M919]
gi|423704361|ref|ZP_17678786.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
H730]
gi|425115671|ref|ZP_18517472.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
8.0566]
gi|425120395|ref|ZP_18522094.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
8.0569]
gi|425273422|ref|ZP_18664834.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW15901]
gi|425283966|ref|ZP_18675005.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW00353]
gi|432370497|ref|ZP_19613583.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE10]
gi|432417729|ref|ZP_19660333.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE44]
gi|432486062|ref|ZP_19727977.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE212]
gi|432564513|ref|ZP_19801094.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE51]
gi|432576536|ref|ZP_19812996.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE56]
gi|432627907|ref|ZP_19863883.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE77]
gi|432637503|ref|ZP_19873373.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE81]
gi|432686089|ref|ZP_19921386.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE156]
gi|432692229|ref|ZP_19927457.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE161]
gi|432705054|ref|ZP_19940154.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE171]
gi|432875894|ref|ZP_20094054.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE154]
gi|432955775|ref|ZP_20147653.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE197]
gi|433048635|ref|ZP_20235988.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE120]
gi|433174177|ref|ZP_20358702.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE232]
gi|442592140|ref|ZP_21010120.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442598058|ref|ZP_21015832.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|450246013|ref|ZP_21900754.1| bifunctional UDP-glucuronic
aciddecarboxylase/UDP-4-amino-4-deoxy-L-
arabinoseformyltransferase [Escherichia coli S17]
gi|6176575|sp|P77398.1|ARNA_ECOLI RecName: Full=Bifunctional polymyxin resistance protein ArnA;
AltName: Full=Polymyxin resistance protein PmrI;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|189046231|sp|B1IXT2.1|ARNA_ECOLC RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723712|sp|B1X8W8.1|ARNA_ECODH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|259563491|sp|C4ZU97.1|ARNA_ECOBW RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|71042200|pdb|1Z7E|A Chain A, Crystal Structure Of Full Length Arna
gi|71042201|pdb|1Z7E|B Chain B, Crystal Structure Of Full Length Arna
gi|71042202|pdb|1Z7E|C Chain C, Crystal Structure Of Full Length Arna
gi|71042203|pdb|1Z7E|D Chain D, Crystal Structure Of Full Length Arna
gi|71042204|pdb|1Z7E|E Chain E, Crystal Structure Of Full Length Arna
gi|71042205|pdb|1Z7E|F Chain F, Crystal Structure Of Full Length Arna
gi|1788589|gb|AAC75315.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. MG1655]
gi|1799607|dbj|BAA16078.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K12 substr. W3110]
gi|16555376|gb|AAL23678.1| UDP-D-glucuronate dehydrogenase [Escherichia coli]
gi|169754359|gb|ACA77058.1| NAD-dependent epimerase/dehydratase [Escherichia coli ATCC 8739]
gi|169889708|gb|ACB03415.1| fused UDP-L-Ara4N formyltransferase; UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. DH10B]
gi|188487712|gb|EDU62815.1| bifunctional polymyxin resistance arnA protein [Escherichia coli
53638]
gi|194424969|gb|EDX40954.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 101-1]
gi|238861262|gb|ACR63260.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli BW2952]
gi|242377889|emb|CAQ32657.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase, subunit of UDP-GlcA
C-4''-decarboxylase / UDP-L-Ara4N formyltransferase
[Escherichia coli BL21(DE3)]
gi|253323865|gb|ACT28467.1| NAD-dependent epimerase/dehydratase [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974167|gb|ACT39838.1| hypothetical protein ECB_02181 [Escherichia coli B str. REL606]
gi|253978334|gb|ACT44004.1| hypothetical protein ECD_02181 [Escherichia coli BL21(DE3)]
gi|260448653|gb|ACX39075.1| NAD-dependent epimerase/dehydratase [Escherichia coli DH1]
gi|299879547|gb|EFI87758.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 196-1]
gi|300314448|gb|EFJ64232.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 175-1]
gi|300451572|gb|EFK15192.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 116-1]
gi|301074182|gb|EFK88988.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 146-1]
gi|309702565|emb|CBJ01893.1| bifunctional polymyxin resistance protein [includes:
UDP-4-amino-4-deoxy-l-arabinose formyltransferase;
UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating] [Escherichia coli ETEC H10407]
gi|310332083|gb|EFP99318.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
1827-70]
gi|315136888|dbj|BAJ44047.1| bifunctional UDP-glucuronic
aciddecarboxylase/UDP-4-amino-4-deoxy-L-
arabinoseformyltransferase [Escherichia coli DH1]
gi|323936653|gb|EGB32939.1| NAD dependent epimerase/dehydratase [Escherichia coli E1520]
gi|323961496|gb|EGB57105.1| NAD dependent epimerase/dehydratase [Escherichia coli H489]
gi|323973040|gb|EGB68234.1| NAD dependent epimerase/dehydratase [Escherichia coli TA007]
gi|339415748|gb|AEJ57420.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
UMNF18]
gi|342361287|gb|EGU25429.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli XH140A]
gi|344194998|gb|EGV49069.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli XH001]
gi|345361924|gb|EGW94081.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_EH250]
gi|345375569|gb|EGX07516.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
G58-1]
gi|345387474|gb|EGX17296.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_S1191]
gi|359332598|dbj|BAL39045.1| fused UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli str. K-12 substr. MDS42]
gi|377992176|gb|EHV55323.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC6B]
gi|377993710|gb|EHV56841.1| polymyxin resistance protein ArnA [Escherichia coli DEC6A]
gi|378007281|gb|EHV70250.1| polymyxin resistance protein ArnA [Escherichia coli DEC6D]
gi|378011143|gb|EHV74088.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC6E]
gi|378031954|gb|EHV94536.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC7B]
gi|384380019|gb|EIE37886.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
J53]
gi|385157070|gb|EIF19063.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O32:H37 str. P4]
gi|385536981|gb|EIF83866.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
M919]
gi|385706600|gb|EIG43639.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
H730]
gi|386121464|gb|EIG70079.1| bifunctional polymyxin resistance protein ARNA [Escherichia sp.
4_1_40B]
gi|386226676|gb|EII48978.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 2.3916]
gi|386236719|gb|EII68695.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 2.4168]
gi|386239651|gb|EII76578.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 3.2303]
gi|386253120|gb|EIJ02810.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli B41]
gi|388409029|gb|EIL69355.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 75]
gi|404291089|gb|EJZ47987.1| bifunctional polymyxin resistance protein ARNA [Escherichia sp.
1_1_43]
gi|408193204|gb|EKI18757.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW15901]
gi|408201656|gb|EKI26805.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW00353]
gi|408460194|gb|EKJ83973.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
AD30]
gi|408568158|gb|EKK44196.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
8.0566]
gi|408569148|gb|EKK45153.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
8.0569]
gi|430884709|gb|ELC07644.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE10]
gi|430938973|gb|ELC59196.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE44]
gi|431015271|gb|ELD28826.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE212]
gi|431092929|gb|ELD98600.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE51]
gi|431114571|gb|ELE18099.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE56]
gi|431162518|gb|ELE62959.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE77]
gi|431170697|gb|ELE70886.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE81]
gi|431221871|gb|ELF19168.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE156]
gi|431226577|gb|ELF23736.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE161]
gi|431242540|gb|ELF36955.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE171]
gi|431420166|gb|ELH02498.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE154]
gi|431467161|gb|ELH47172.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE197]
gi|431564406|gb|ELI37580.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE120]
gi|431691921|gb|ELJ57366.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE232]
gi|441608293|emb|CCP99146.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441653332|emb|CCQ01535.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|449319717|gb|EMD09763.1| bifunctional UDP-glucuronic
aciddecarboxylase/UDP-4-amino-4-deoxy-L-
arabinoseformyltransferase [Escherichia coli S17]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432905514|ref|ZP_20114381.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE194]
gi|433039255|ref|ZP_20226854.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE113]
gi|431432749|gb|ELH14426.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE194]
gi|431551355|gb|ELI25341.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE113]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSRYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|422762238|ref|ZP_16815995.1| NAD dependent epimerase/dehydratase [Escherichia coli E1167]
gi|324117864|gb|EGC11763.1| NAD dependent epimerase/dehydratase [Escherichia coli E1167]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|168817972|ref|ZP_02829972.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|409250903|ref|YP_006886710.1| Bifunctional polymyxin resistance protein arnA Includes:
UDP-4-amino-4-deoxy-L-arabinose formyltransferase;
UDP-L-Ara4N formyltransferase; ArnAFT; Includes:
RecName: Full=UDP-glucuronic acid oxidase,
UDP-4-keto-hexauronic acid decarboxylating; UDP-GlcUA
decarboxylase; UDP-glucuronic acid dehydrogenase; ArnADH
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|205344826|gb|EDZ31590.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|320086731|emb|CBY96503.1| Bifunctional polymyxin resistance protein arnA Includes:
UDP-4-amino-4-deoxy-L-arabinose formyltransferase;
UDP-L-Ara4N formyltransferase; ArnAFT; Includes:
RecName: Full=UDP-glucuronic acid oxidase,
UDP-4-keto-hexauronic acid decarboxylating; UDP-GlcUA
decarboxylase; UDP-glucuronic acid dehydrogenase; ArnADH
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|421885671|ref|ZP_16316861.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
gi|379984761|emb|CCF89134.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Senftenberg str. SS209]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|415813396|ref|ZP_11505205.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
LT-68]
gi|323171937|gb|EFZ57581.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
LT-68]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|331642892|ref|ZP_08344027.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H736]
gi|331039690|gb|EGI11910.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H736]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|168466000|ref|ZP_02699870.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|418763745|ref|ZP_13319851.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|418765693|ref|ZP_13321776.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|418770096|ref|ZP_13326121.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|418776396|ref|ZP_13332342.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|418781781|ref|ZP_13337657.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|418785787|ref|ZP_13341614.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|418803196|ref|ZP_13358820.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
gi|419789125|ref|ZP_14314807.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|419791394|ref|ZP_14317047.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|195631191|gb|EDX49751.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Newport str. SL317]
gi|392615629|gb|EIW98065.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 1]
gi|392620614|gb|EIX02981.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. Levine 15]
gi|392731438|gb|EIZ88665.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35185]
gi|392738299|gb|EIZ95445.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21539]
gi|392740206|gb|EIZ97332.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35199]
gi|392746018|gb|EJA03037.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35188]
gi|392746107|gb|EJA03125.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 33953]
gi|392751028|gb|EJA07985.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 21559]
gi|392775806|gb|EJA32497.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 35202]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|168242418|ref|ZP_02667350.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|194449563|ref|YP_002046353.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|200386760|ref|ZP_03213372.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|386592109|ref|YP_006088509.1| Polymyxin resistance protein ArnA_DH [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|417366628|ref|ZP_12138838.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|419728431|ref|ZP_14255396.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|419734315|ref|ZP_14261208.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|419737852|ref|ZP_14264622.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|419746326|ref|ZP_14272914.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|419751027|ref|ZP_14277462.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|226723724|sp|B4TBG6.1|ARNA_SALHS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|194407867|gb|ACF68086.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|199603858|gb|EDZ02403.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205338264|gb|EDZ25028.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|353591397|gb|EHC49680.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Hvittingfoss str. A4-620]
gi|381297973|gb|EIC39056.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41563]
gi|381299485|gb|EIC40557.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41579]
gi|381302805|gb|EIC43835.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41566]
gi|381303873|gb|EIC44887.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41573]
gi|381304943|gb|EIC45888.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. 41565]
gi|383799153|gb|AFH46235.1| Polymyxin resistance protein ArnA_DH [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|417392070|ref|ZP_12155025.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
gi|353613137|gb|EHC65310.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Minnesota str. A4-603]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|293415549|ref|ZP_06658192.1| bifunctional polymyxin resistance protein aRNA [Escherichia coli
B185]
gi|432450410|ref|ZP_19692675.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE193]
gi|433034089|ref|ZP_20221805.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE112]
gi|291433197|gb|EFF06176.1| bifunctional polymyxin resistance protein aRNA [Escherichia coli
B185]
gi|430979800|gb|ELC96565.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE193]
gi|431551095|gb|ELI25082.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE112]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/376 (32%), Positives = 195/376 (51%), Gaps = 38/376 (10%)
Query: 10 LDGRPI----KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L+ +P+ + + ++G GFIG+HL E++L E +++ LD+ +D I L
Sbjct: 304 LNSQPVCTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------ 357
Query: 66 GADRIQFHRLNIK---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
+ FH + H +E +K D+ + L AI TP +Y PL +F + L
Sbjct: 358 --NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLR 415
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+++YC + KR+I ST EVYG + ED S I G + K R
Sbjct: 416 IIRYCVKYRKRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPR 460
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
W Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R +
Sbjct: 461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLIL 517
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQL 301
NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L
Sbjct: 518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEEL 577
Query: 302 AEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
EM+ + K P V S +YG+GY D + R P + ++ L W PK
Sbjct: 578 GEMLLASFEKHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKI 636
Query: 359 SLWDLLESTLTYQHRT 374
+ + ++ TL + RT
Sbjct: 637 DMQETIDETLDFFLRT 652
>gi|191166526|ref|ZP_03028356.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B7A]
gi|309793133|ref|ZP_07687561.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 145-7]
gi|417146338|ref|ZP_11987296.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 1.2264]
gi|417237671|ref|ZP_12035402.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 9.0111]
gi|418041838|ref|ZP_12680052.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli W26]
gi|422777540|ref|ZP_16831192.1| NAD dependent epimerase/dehydratase [Escherichia coli H120]
gi|432481623|ref|ZP_19723580.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE210]
gi|433092636|ref|ZP_20278903.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE138]
gi|190903486|gb|EDV63205.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli B7A]
gi|308123419|gb|EFO60681.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 145-7]
gi|323944769|gb|EGB40835.1| NAD dependent epimerase/dehydratase [Escherichia coli H120]
gi|383475241|gb|EID67206.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli W26]
gi|386163790|gb|EIH25585.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 1.2264]
gi|386213449|gb|EII23874.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 9.0111]
gi|431006995|gb|ELD21964.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE210]
gi|431609966|gb|ELI79271.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE138]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|71042196|pdb|1Z73|A Chain A, Crystal Structure Of E. Coli Arna Dehydrogenase
(decarboxylase) Domain, S433a Mutant
Length = 358
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 191/367 (52%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 16 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 75
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 76 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 122
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 123 KRIIFPSTAEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 167
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 168 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 224
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 225 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 284
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + ++ L W PK + + ++ T
Sbjct: 285 KHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDET 343
Query: 368 LTYQHRT 374
L + RT
Sbjct: 344 LDFFLRT 350
>gi|417374668|ref|ZP_12144354.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
gi|353598821|gb|EHC55166.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Inverness str. R8-3668]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 198/372 (53%), Gaps = 46/372 (12%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 ---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD 362
+G +E S+ +YG+GY D R P + + LGW P ++ D
Sbjct: 588 HPLRYHFPPFAGFQVVE-------SRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRD 640
Query: 363 LLESTLTYQHRT 374
+E TL + R+
Sbjct: 641 TVEETLDFFLRS 652
>gi|161612976|ref|YP_001586941.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|189046232|sp|A9N5B2.1|ARNA_SALPB RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|161362340|gb|ABX66108.1| hypothetical protein SPAB_00682 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|432407310|ref|ZP_19650019.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE28]
gi|430930069|gb|ELC50578.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE28]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|197251120|ref|YP_002147255.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|440761621|ref|ZP_20940692.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
gi|440767170|ref|ZP_20946154.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|440773873|ref|ZP_20952762.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|226723720|sp|B5EZH8.1|ARNA_SALA4 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|197214823|gb|ACH52220.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Agona str. SL483]
gi|436414236|gb|ELP12167.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Agona str. SH10GFN094]
gi|436420966|gb|ELP18818.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Agona str. SH08SF124]
gi|436424603|gb|ELP22371.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Agona str. SH11G1113]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|204929026|ref|ZP_03220169.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|207857717|ref|YP_002244368.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238913508|ref|ZP_04657345.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|378954353|ref|YP_005211840.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|417350282|ref|ZP_12128699.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|417512187|ref|ZP_12176583.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|421357493|ref|ZP_15807804.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|421361653|ref|ZP_15811912.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|421367281|ref|ZP_15817475.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|421371379|ref|ZP_15821538.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|421375511|ref|ZP_15825623.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|421379404|ref|ZP_15829473.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|421384433|ref|ZP_15834458.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|421388477|ref|ZP_15838467.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|421392920|ref|ZP_15842869.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|421397723|ref|ZP_15847635.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|421401960|ref|ZP_15851825.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|421407043|ref|ZP_15856852.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|421411507|ref|ZP_15861272.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|421418396|ref|ZP_15868098.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|421420093|ref|ZP_15869774.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|421424517|ref|ZP_15874159.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|421430528|ref|ZP_15880115.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|421434032|ref|ZP_15883583.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|421440576|ref|ZP_15890054.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|421444340|ref|ZP_15893771.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|421447248|ref|ZP_15896650.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|436591161|ref|ZP_20512051.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|436795625|ref|ZP_20522398.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|436808451|ref|ZP_20527875.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|436817371|ref|ZP_20534453.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|436830672|ref|ZP_20535414.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|436849210|ref|ZP_20540379.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|436856806|ref|ZP_20545728.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|436862575|ref|ZP_20549258.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|436872291|ref|ZP_20555313.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|436880029|ref|ZP_20559863.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|436889152|ref|ZP_20565073.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|436897261|ref|ZP_20569908.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|436900913|ref|ZP_20571837.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|436909630|ref|ZP_20576354.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|436917382|ref|ZP_20580916.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|436927961|ref|ZP_20587455.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|436933912|ref|ZP_20590067.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|436942297|ref|ZP_20595280.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|436948600|ref|ZP_20598813.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|436957238|ref|ZP_20602906.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|436968342|ref|ZP_20607751.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|436986289|ref|ZP_20615379.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|436990863|ref|ZP_20617160.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|437004187|ref|ZP_20621916.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|437014493|ref|ZP_20625571.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|437026914|ref|ZP_20629925.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|437045130|ref|ZP_20637565.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|437048459|ref|ZP_20639498.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|437060897|ref|ZP_20646724.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|437069837|ref|ZP_20651266.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|437075338|ref|ZP_20653792.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|437080534|ref|ZP_20657138.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|437091049|ref|ZP_20663040.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|437102653|ref|ZP_20666681.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|437119925|ref|ZP_20671143.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|437127867|ref|ZP_20674957.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|437135829|ref|ZP_20679475.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|437143390|ref|ZP_20684257.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|437154860|ref|ZP_20691320.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|437157984|ref|ZP_20692938.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|437167848|ref|ZP_20699046.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|437182649|ref|ZP_20707148.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|437258329|ref|ZP_20716366.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|437266818|ref|ZP_20720902.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|437278784|ref|ZP_20727445.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|437300116|ref|ZP_20732966.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|437313699|ref|ZP_20736867.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|437324730|ref|ZP_20739842.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|437336984|ref|ZP_20743193.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|437419634|ref|ZP_20754420.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|437461097|ref|ZP_20762046.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|437472643|ref|ZP_20765647.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|437492896|ref|ZP_20771793.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|437515051|ref|ZP_20777934.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|437529527|ref|ZP_20780411.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|437564252|ref|ZP_20786958.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|437573214|ref|ZP_20789490.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|437591576|ref|ZP_20794856.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|437600836|ref|ZP_20797372.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|437615301|ref|ZP_20802123.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|437632003|ref|ZP_20806462.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|437660426|ref|ZP_20812498.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|437681734|ref|ZP_20818549.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|437700499|ref|ZP_20823857.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|437705269|ref|ZP_20824942.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|437763090|ref|ZP_20834892.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|437804724|ref|ZP_20839052.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|437950692|ref|ZP_20851998.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|438088200|ref|ZP_20859656.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|438098281|ref|ZP_20862689.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|438111620|ref|ZP_20868421.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|438140118|ref|ZP_20874894.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|445162995|ref|ZP_21393800.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|445215733|ref|ZP_21401962.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|445228696|ref|ZP_21404809.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|445330463|ref|ZP_21413849.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|445344802|ref|ZP_21417838.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|445368528|ref|ZP_21425704.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|452123874|ref|YP_007474122.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
gi|226723722|sp|B5R272.1|ARNA_SALEP RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|204321570|gb|EDZ06769.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|206709520|emb|CAR33865.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|353570474|gb|EHC34728.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353640606|gb|EHC85556.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Senftenberg str. A4-543]
gi|357204964|gb|AET53010.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Gallinarum/pullorum
str. RKS5078]
gi|395988093|gb|EJH97254.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 640631]
gi|395991555|gb|EJI00679.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 622731-39]
gi|395992656|gb|EJI01768.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639016-6]
gi|396004056|gb|EJI13040.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-0424]
gi|396004426|gb|EJI13408.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-6]
gi|396006703|gb|EJI15665.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 485549-17]
gi|396019421|gb|EJI28277.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-22]
gi|396019820|gb|EJI28671.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-26]
gi|396020388|gb|EJI29233.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 596866-70]
gi|396031606|gb|EJI40332.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-50]
gi|396033170|gb|EJI41885.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629164-37]
gi|396033487|gb|EJI42194.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 639672-46]
gi|396038397|gb|EJI47036.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-2659]
gi|396045873|gb|EJI54464.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 77-1427]
gi|396046633|gb|EJI55217.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 78-1757]
gi|396055576|gb|EJI64061.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 8b-1]
gi|396060058|gb|EJI68505.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22510-1]
gi|396061017|gb|EJI69453.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648905 5-18]
gi|396066507|gb|EJI74869.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 6-18]
gi|396067825|gb|EJI76182.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-3079]
gi|396075081|gb|EJI83357.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 58-6482]
gi|434939938|gb|ELL46669.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|434962245|gb|ELL55466.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS44]
gi|434967469|gb|ELL60285.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1882]
gi|434971820|gb|ELL64323.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1884]
gi|434979862|gb|ELL71819.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 22704]
gi|434983414|gb|ELL75210.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1594]
gi|434989065|gb|ELL80638.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1566]
gi|434990817|gb|ELL82347.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1580]
gi|434998824|gb|ELL90038.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1543]
gi|435000210|gb|ELL91358.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1441]
gi|435006333|gb|ELL97234.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1810]
gi|435008178|gb|ELL99004.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1558]
gi|435014388|gb|ELM04965.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1018]
gi|435021494|gb|ELM11862.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1010]
gi|435029054|gb|ELM19114.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1729]
gi|435031830|gb|ELM21785.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0895]
gi|435035003|gb|ELM24851.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0899]
gi|435042140|gb|ELM31872.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1457]
gi|435044318|gb|ELM34015.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1747]
gi|435055471|gb|ELM44883.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0968]
gi|435056893|gb|ELM46263.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1444]
gi|435060654|gb|ELM49901.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1445]
gi|435061515|gb|ELM50738.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1559]
gi|435069360|gb|ELM58362.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1565]
gi|435072929|gb|ELM61834.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1808]
gi|435080358|gb|ELM69039.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1455]
gi|435085021|gb|ELM73576.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1811]
gi|435086060|gb|ELM74605.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_0956]
gi|435090177|gb|ELM78581.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1725]
gi|435091753|gb|ELM80127.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1745]
gi|435098892|gb|ELM87121.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1575]
gi|435106145|gb|ELM94164.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1791]
gi|435113197|gb|ELN01046.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CDC_2010K_1795]
gi|435113365|gb|ELN01213.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 576709]
gi|435122744|gb|ELN10257.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 635290-58]
gi|435128524|gb|ELN15861.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-16]
gi|435129450|gb|ELN16746.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-19]
gi|435137618|gb|ELN24658.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607307-2]
gi|435138866|gb|ELN25881.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 629163]
gi|435140244|gb|ELN27207.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 607308-9]
gi|435150826|gb|ELN37490.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_N202]
gi|435153164|gb|ELN39779.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE15-1]
gi|435164188|gb|ELN50285.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_76-3618]
gi|435166658|gb|ELN52631.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_81-2490]
gi|435171888|gb|ELN57444.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL913]
gi|435176671|gb|ELN62038.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SL909]
gi|435178815|gb|ELN64004.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CVM_69-4941]
gi|435181930|gb|ELN66964.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 638970-15]
gi|435193843|gb|ELN78316.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 17927]
gi|435197333|gb|ELN81625.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. CHS4]
gi|435201529|gb|ELN85427.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 22-17]
gi|435220155|gb|ELO02452.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 1-1]
gi|435225944|gb|ELO07542.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 4-1]
gi|435228515|gb|ELO09952.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642046 4-7]
gi|435229303|gb|ELO10681.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648898 4-5]
gi|435236570|gb|ELO17304.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648900 1-16]
gi|435245594|gb|ELO25644.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648899 3-17]
gi|435246929|gb|ELO26917.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 1-17]
gi|435254452|gb|ELO33847.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648901 39-2]
gi|435261961|gb|ELO41105.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648902 6-8]
gi|435262632|gb|ELO41717.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648903 1-6]
gi|435268993|gb|ELO47546.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 653049 13-19]
gi|435270651|gb|ELO49142.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 642044 8-1]
gi|435273733|gb|ELO51958.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435283232|gb|ELO60818.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435292636|gb|ELO69392.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 543463 42-20]
gi|435302527|gb|ELO78485.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 33944]
gi|435306570|gb|ELO81854.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 6.0562-1]
gi|435308647|gb|ELO83574.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435317558|gb|ELO90588.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 81-2625]
gi|435326490|gb|ELO98302.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 62-1976]
gi|435330856|gb|ELP02097.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 53-407]
gi|444858927|gb|ELX83895.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 20037]
gi|444866103|gb|ELX90854.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE10]
gi|444868256|gb|ELX92900.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE8a]
gi|444878138|gb|ELY02265.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 18569]
gi|444879818|gb|ELY03908.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13-1]
gi|444882126|gb|ELY06117.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. PT23]
gi|451912878|gb|AGF84684.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Javiana str. CFSAN001992]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|82544737|ref|YP_408684.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella boydii Sb227]
gi|417682938|ref|ZP_12332291.1| bifunctional polymyxin resistance protein arnA [Shigella boydii
3594-74]
gi|420326409|ref|ZP_14828160.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
CCH060]
gi|420353634|ref|ZP_14854744.1| bifunctional polymyxin resistance protein ArnA [Shigella boydii
4444-74]
gi|421683333|ref|ZP_16123128.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri 1485-80]
gi|123728361|sp|Q31YK2.1|ARNA_SHIBS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|81246148|gb|ABB66856.1| putative transformylase [Shigella boydii Sb227]
gi|332093622|gb|EGI98680.1| bifunctional polymyxin resistance protein arnA [Shigella boydii
3594-74]
gi|391249926|gb|EIQ09149.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
CCH060]
gi|391278171|gb|EIQ36888.1| bifunctional polymyxin resistance protein ArnA [Shigella boydii
4444-74]
gi|404338832|gb|EJZ65276.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri 1485-80]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|417286577|ref|ZP_12073866.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TW07793]
gi|386250036|gb|EII96205.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TW07793]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|198243911|ref|YP_002216367.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|375119850|ref|ZP_09765017.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|445147318|ref|ZP_21388074.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|445157860|ref|ZP_21393004.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
gi|226723721|sp|B5FNT9.1|ARNA_SALDC RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|197938427|gb|ACH75760.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Dublin str. CT_02021853]
gi|326624117|gb|EGE30462.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|444844861|gb|ELX70087.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. SL1438]
gi|444845941|gb|ELX71123.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Dublin str. HWS51]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|425899501|ref|ZP_18876092.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
gi|397890895|gb|EJL07377.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
chlororaphis subsp. aureofaciens 30-84]
Length = 668
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ D I+
Sbjct: 304 GSLLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDKYEVYGLDIGCDAIERLRHHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 HFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S I
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQNF---DEDTSNLI 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G++ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYGSK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +++N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIVDNENDVCNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G +V SK FYG GY D + R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFREVESKSFYGAGYQDVEHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMKETIGNTLDF 650
>gi|417342577|ref|ZP_12123350.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|418787787|ref|ZP_13343587.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|418791732|ref|ZP_13347485.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
gi|418800075|ref|ZP_13355739.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|357956462|gb|EHJ81888.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|392762705|gb|EJA19519.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19567]
gi|392765312|gb|EJA22100.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19447]
gi|392769581|gb|EJA26311.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Newport str. CVM 19449]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|386614869|ref|YP_006134535.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
UMNK88]
gi|332344038|gb|AEE57372.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
UMNK88]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|300918582|ref|ZP_07135170.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 115-1]
gi|419923079|ref|ZP_14441051.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 541-15]
gi|432534529|ref|ZP_19771504.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE234]
gi|300414234|gb|EFJ97544.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 115-1]
gi|388394653|gb|EIL55915.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 541-15]
gi|431060165|gb|ELD69499.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE234]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|300903638|ref|ZP_07121556.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 84-1]
gi|301303286|ref|ZP_07209411.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 124-1]
gi|415863984|ref|ZP_11537135.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 85-1]
gi|417640010|ref|ZP_12290151.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
TX1999]
gi|419170933|ref|ZP_13714819.1| polymyxin resistance protein ArnA [Escherichia coli DEC7A]
gi|419181573|ref|ZP_13725186.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC7C]
gi|419187013|ref|ZP_13730527.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC7D]
gi|419192306|ref|ZP_13735759.1| polymyxin resistance protein ArnA [Escherichia coli DEC7E]
gi|420386320|ref|ZP_14885670.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EPECa12]
gi|433130824|ref|ZP_20316259.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE163]
gi|433135486|ref|ZP_20320830.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE166]
gi|300404374|gb|EFJ87912.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 84-1]
gi|300841460|gb|EFK69220.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 124-1]
gi|315255189|gb|EFU35157.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 85-1]
gi|345393012|gb|EGX22790.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
TX1999]
gi|378014977|gb|EHV77874.1| polymyxin resistance protein ArnA [Escherichia coli DEC7A]
gi|378023206|gb|EHV85883.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC7C]
gi|378029005|gb|EHV91621.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC7D]
gi|378038370|gb|EHW00885.1| polymyxin resistance protein ArnA [Escherichia coli DEC7E]
gi|391305030|gb|EIQ62825.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EPECa12]
gi|431645621|gb|ELJ13165.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE163]
gi|431656164|gb|ELJ23185.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE166]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|157161741|ref|YP_001459059.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli HS]
gi|417122207|ref|ZP_11971465.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 97.0246]
gi|425289270|ref|ZP_18680118.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 3006]
gi|432527036|ref|ZP_19764129.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE233]
gi|432675363|ref|ZP_19910822.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE142]
gi|166988214|sp|A8A2C2.1|ARNA_ECOHS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|157067421|gb|ABV06676.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli HS]
gi|386147487|gb|EIG93927.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 97.0246]
gi|408213822|gb|EKI38301.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 3006]
gi|431063295|gb|ELD72544.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE233]
gi|431213898|gb|ELF11753.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE142]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|421570270|ref|ZP_16015962.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|421576231|ref|ZP_16021834.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|421578087|ref|ZP_16023669.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|421585509|ref|ZP_16031006.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
gi|402519029|gb|EJW26393.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00325]
gi|402525126|gb|EJW32420.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00322]
gi|402525664|gb|EJW32951.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00326]
gi|402529985|gb|EJW37210.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Heidelberg str. CFSAN00328]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|300931395|ref|ZP_07146724.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 187-1]
gi|300460765|gb|EFK24258.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 187-1]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|425305984|ref|ZP_18695693.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli N1]
gi|408228151|gb|EKI51693.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli N1]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|402085830|gb|EJT80728.1| hypothetical protein GGTG_00722 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 676
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 194/358 (54%), Gaps = 24/358 (6%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
+P I ++G GFIG HL +IL T + LD+ + +I L E R F +
Sbjct: 320 RPKRILILGVNGFIGHHLARRILETTDWHVRGLDLGSHRIASLAEQHGGGSGCRFVFRQG 379
Query: 76 NIKHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
N+ + R +E + D+ + LAAI TP Y PL +F L +V++ +++ RL
Sbjct: 380 NMASNGRWIEDQVAACDVVVPLAAIATPRTYIEDPLSVFELDFEAHLAIVRWATQHGTRL 439
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG L +D+ L +S +G + K RW YAC+KQL++R
Sbjct: 440 VFPSTSEVYG------LCRDAEL---------SPSSSELAYGPVCKTRWIYACSKQLMDR 484
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+++A G + GL+FT+ RPFNW+GP +D + P+ G RV F NLLR + L L D
Sbjct: 485 VVWAHGTQRGLDFTLFRPFNWVGPGLDSL--ALRPAGG-SRVTTQFLGNLLRGEDLTLSD 541
Query: 255 GGQSQRTFIYIKDAIEA-VLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV---YA 310
GG+ +R F + D ++A V ++ ++ G I+N+G+P N+ +VR+LAE M E
Sbjct: 542 GGRQRRAFTAVGDGVDALVRILADDAGVTRGRIYNIGSPDNDCSVRELAERMLEAARGTP 601
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
+++G A + V+V S E YG GY D +R+P +T + LGW P SL D + + +
Sbjct: 602 ELAGRCAGVK-MVEVPSGELYGNGYQDVLRRVPCITDTCRDLGWKPTMSLDDCVRAMV 658
>gi|420093653|ref|ZP_14605299.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H8 str.
CVM9634]
gi|424774410|ref|ZP_18201425.1| bifunctional UDP-glucuronic
aciddecarboxylase/UDP-4-amino-4-deoxy-L-
arabinoseformyltransferase [Escherichia coli O111:H8
str. CFSAN001632]
gi|394398752|gb|EJE74894.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H8 str.
CVM9634]
gi|421934359|gb|EKT92134.1| bifunctional UDP-glucuronic
aciddecarboxylase/UDP-4-amino-4-deoxy-L-
arabinoseformyltransferase [Escherichia coli O111:H8
str. CFSAN001632]
Length = 374
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 191/367 (52%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 32 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 91
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 92 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 138
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 139 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 183
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 184 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 240
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 241 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 300
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + ++ L W PK + + ++ T
Sbjct: 301 KHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDET 359
Query: 368 LTYQHRT 374
L + RT
Sbjct: 360 LDFFLRT 366
>gi|416268763|ref|ZP_11642262.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella dysenteriae CDC 74-1112]
gi|320174983|gb|EFW50098.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella dysenteriae CDC 74-1112]
Length = 441
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 99 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 150
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 151 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 210
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 211 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 255
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 256 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 312
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 313 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 372
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 373 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 431
Query: 373 RT 374
RT
Sbjct: 432 RT 433
>gi|259909155|ref|YP_002649511.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Erwinia pyrifoliae Ep1/96]
gi|387872099|ref|YP_005803477.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Erwinia pyrifoliae DSM 12163]
gi|224964777|emb|CAX56295.1| Bifunctional polymyxin resistance protein ArnA [Erwinia pyrifoliae
Ep1/96]
gi|283479190|emb|CAY75106.1| Bifunctional polymyxin resistance protein arnA [Erwinia pyrifoliae
DSM 12163]
Length = 659
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 186/355 (52%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L++ + LD+ +D I + G +R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLVDENFDVFGLDIGSDAISRFI------GHERFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDT---------------TFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG
Sbjct: 477 YGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVDGGGQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE +++QLAE + + + +
Sbjct: 534 KRCFTDIHDGIEALFRIIENRQHNCDGQIINIGNPENEASIKQLAEQLLASFERHPLRNR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+V S +YG+GY D + R P + + L W P+ +L ++ TL +
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLNWQPEVALDKTIDDTLDF 648
>gi|110642463|ref|YP_670193.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 536]
gi|191169920|ref|ZP_03031474.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli F11]
gi|300981194|ref|ZP_07175403.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 200-1]
gi|422375542|ref|ZP_16455807.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 60-1]
gi|432471622|ref|ZP_19713668.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE206]
gi|432714034|ref|ZP_19949074.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE8]
gi|433078434|ref|ZP_20264971.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE131]
gi|123049026|sp|Q0TFI7.1|ARNA_ECOL5 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|110344055|gb|ABG70292.1| hypothetical protein YfbG [Escherichia coli 536]
gi|190909436|gb|EDV69021.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli F11]
gi|300307644|gb|EFJ62164.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 200-1]
gi|324013145|gb|EGB82364.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 60-1]
gi|430998011|gb|ELD14260.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE206]
gi|431256811|gb|ELF49746.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE8]
gi|431596267|gb|ELI66222.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE131]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLCEDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|437197406|ref|ZP_20711196.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
gi|435224886|gb|ELO06827.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 13183-1]
Length = 427
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 81 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 133
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 134 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 193
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 194 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 237
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 238 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 294
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 295 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 354
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 355 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 413
Query: 369 TYQHRT 374
+ R+
Sbjct: 414 DFFLRS 419
>gi|419197763|ref|ZP_13741149.1| NAD dependent epimerase/dehydratase family protein [Escherichia
coli DEC8A]
gi|378046320|gb|EHW08699.1| NAD dependent epimerase/dehydratase family protein [Escherichia
coli DEC8A]
Length = 362
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 191/367 (52%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 20 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 79
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 80 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 126
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 127 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 171
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 172 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 228
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 229 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 288
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + ++ L W PK + + ++ T
Sbjct: 289 KHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDET 347
Query: 368 LTYQHRT 374
L + RT
Sbjct: 348 LDFFLRT 354
>gi|398859616|ref|ZP_10615289.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM79]
gi|398236577|gb|EJN22355.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM79]
Length = 668
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDGNF---DEDSSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSISKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNENDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + A D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRANFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWIPTVEMSETIGNTLDF 650
>gi|375002116|ref|ZP_09726456.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
gi|353076804|gb|EHB42564.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Infantis str. SARB27]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|385787670|ref|YP_005818779.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Erwinia sp. Ejp617]
gi|310766942|gb|ADP11892.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Erwinia sp. Ejp617]
Length = 659
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 186/355 (52%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L++ + LD+ +D I + G +R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLVDENFDVFGLDIGSDAISRFI------GHERFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDA---------------TFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG
Sbjct: 477 YGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVDGGGQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GNP NE +++QLAE + + + +
Sbjct: 534 KRCFTDIHDGIEALFRIIENRQHNCDGQIINIGNPENEASIKQLAEQLLASFERHPLRNR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+V S +YG+GY D + R P + + L W P+ +L ++ TL +
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIRNAKRLLNWQPEVALDKTIDDTLDF 648
>gi|16765626|ref|NP_461241.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|167992635|ref|ZP_02573732.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197264681|ref|ZP_03164755.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|374982183|ref|ZP_09723505.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|378445728|ref|YP_005233360.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378451014|ref|YP_005238373.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|378700209|ref|YP_005182166.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|378984861|ref|YP_005248016.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|378989685|ref|YP_005252849.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|379701530|ref|YP_005243258.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|383497000|ref|YP_005397689.1| lipopolysaccharide modification protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 798]
gi|422026585|ref|ZP_16372968.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|422031609|ref|ZP_16377767.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|427551504|ref|ZP_18928259.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|427568056|ref|ZP_18932980.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|427588445|ref|ZP_18937775.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|427611929|ref|ZP_18942636.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|427635651|ref|ZP_18947532.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|427656610|ref|ZP_18952298.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|427661853|ref|ZP_18957206.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|427671712|ref|ZP_18962023.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
gi|6136698|sp|O52325.1|ARNA_SALTY RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|2921421|gb|AAC04772.1| unknown [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420839|gb|AAL21200.1| putative transformylase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|197242936|gb|EDY25556.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA23]
gi|205329208|gb|EDZ15972.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261247507|emb|CBG25334.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994392|gb|ACY89277.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158857|emb|CBW18370.1| hypothetical lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|312913289|dbj|BAJ37263.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321223000|gb|EFX48071.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|323130629|gb|ADX18059.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|332989232|gb|AEF08215.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
gi|380463821|gb|AFD59224.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhimurium str. 798]
gi|414017377|gb|EKT01107.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm1]
gi|414018282|gb|EKT01946.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm8]
gi|414019392|gb|EKT03007.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm2]
gi|414031895|gb|EKT14931.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm9]
gi|414033033|gb|EKT16011.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm3]
gi|414036314|gb|EKT19151.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm4]
gi|414046409|gb|EKT28740.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm10]
gi|414047349|gb|EKT29635.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm6]
gi|414052156|gb|EKT34223.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm11]
gi|414059012|gb|EKT40634.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm12]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|91211549|ref|YP_541535.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli UTI89]
gi|117624448|ref|YP_853361.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli APEC O1]
gi|218559171|ref|YP_002392084.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli S88]
gi|237704733|ref|ZP_04535214.1| bifunctional polymyxin resistance protein aRNA [Escherichia sp.
3_2_53FAA]
gi|386600134|ref|YP_006101640.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli IHE3034]
gi|386603722|ref|YP_006110022.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli UM146]
gi|417085521|ref|ZP_11952949.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli cloneA_i1]
gi|419947192|ref|ZP_14463549.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli HM605]
gi|422360303|ref|ZP_16440937.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 110-3]
gi|422749535|ref|ZP_16803447.1| NAD dependent epimerase/dehydratase [Escherichia coli H252]
gi|422755680|ref|ZP_16809504.1| NAD dependent epimerase/dehydratase [Escherichia coli H263]
gi|422837691|ref|ZP_16885664.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
H397]
gi|432358599|ref|ZP_19601825.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE4]
gi|432363333|ref|ZP_19606500.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE5]
gi|432574334|ref|ZP_19810814.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE55]
gi|432588582|ref|ZP_19824938.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE58]
gi|432598241|ref|ZP_19834517.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE62]
gi|432755069|ref|ZP_19989619.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE22]
gi|432779194|ref|ZP_20013437.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE59]
gi|432788141|ref|ZP_20022273.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE65]
gi|432821590|ref|ZP_20055282.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE118]
gi|432827722|ref|ZP_20061374.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE123]
gi|433005712|ref|ZP_20194141.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE227]
gi|433008295|ref|ZP_20196712.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE229]
gi|433154376|ref|ZP_20339318.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE176]
gi|433164129|ref|ZP_20348867.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE179]
gi|433169234|ref|ZP_20353862.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE180]
gi|123084415|sp|Q1R9G0.1|ARNA_ECOUT RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|134035391|sp|A1ADA7.1|ARNA_ECOK1 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723708|sp|B7MG22.1|ARNA_ECO45 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|91073123|gb|ABE08004.1| hypothetical protein YfbG [Escherichia coli UTI89]
gi|115513572|gb|ABJ01647.1| putative nucleoside-diphosphate-sugar epimerase [Escherichia coli
APEC O1]
gi|218365940|emb|CAR03684.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli S88]
gi|226901099|gb|EEH87358.1| bifunctional polymyxin resistance protein aRNA [Escherichia sp.
3_2_53FAA]
gi|294491185|gb|ADE89941.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli IHE3034]
gi|307626206|gb|ADN70510.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli UM146]
gi|315285878|gb|EFU45316.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 110-3]
gi|323952050|gb|EGB47924.1| NAD dependent epimerase/dehydratase [Escherichia coli H252]
gi|323956024|gb|EGB51777.1| NAD dependent epimerase/dehydratase [Escherichia coli H263]
gi|355351293|gb|EHG00485.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli cloneA_i1]
gi|371610600|gb|EHN99128.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
H397]
gi|388411111|gb|EIL71297.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli HM605]
gi|430877254|gb|ELC00710.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE4]
gi|430886552|gb|ELC09407.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE5]
gi|431107932|gb|ELE12096.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE55]
gi|431120915|gb|ELE23913.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE58]
gi|431131108|gb|ELE33191.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE62]
gi|431302278|gb|ELF91466.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE22]
gi|431327347|gb|ELG14692.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE59]
gi|431337858|gb|ELG24946.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE65]
gi|431368437|gb|ELG54905.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE118]
gi|431372971|gb|ELG58633.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE123]
gi|431514699|gb|ELH92540.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE227]
gi|431523625|gb|ELI00762.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE229]
gi|431673919|gb|ELJ40107.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE176]
gi|431687434|gb|ELJ52985.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE179]
gi|431688086|gb|ELJ53627.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE180]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 190/368 (51%), Gaps = 46/368 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---- 311
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 312 -----VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+G +E S +YG+GY D + R P + + L W PK + + ++
Sbjct: 592 HYFPPFAGFRVVE-------SSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDE 644
Query: 367 TLTYQHRT 374
TL + RT
Sbjct: 645 TLDFFLRT 652
>gi|419701090|ref|ZP_14228692.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SCI-07]
gi|380347836|gb|EIA36122.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SCI-07]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|66361562|pdb|2BLL|A Chain A, Apo-Structure Of The C-Terminal Decarboxylase Domain Of
Arna
Length = 345
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 192/369 (52%), Gaps = 44/369 (11%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADR 69
+ + ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++
Sbjct: 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEW 60
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
I++H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 61 IEYH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVK 107
Query: 130 NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
KR+I ST EVYG + ED S I G + K RW Y+ +K
Sbjct: 108 YRKRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSK 152
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
QL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P
Sbjct: 153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSP 209
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEV 308
+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+
Sbjct: 210 IKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLAS 269
Query: 309 YAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
+ K P V S +YG+GY D + R P + ++ L W PK + + ++
Sbjct: 270 FEKHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETID 328
Query: 366 STLTYQHRT 374
TL + RT
Sbjct: 329 ETLDFFLRT 337
>gi|306814631|ref|ZP_07448793.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli NC101]
gi|432381995|ref|ZP_19624938.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE15]
gi|432387807|ref|ZP_19630696.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE16]
gi|432514557|ref|ZP_19751781.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE224]
gi|432612065|ref|ZP_19848227.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE72]
gi|432646827|ref|ZP_19882617.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE86]
gi|432656409|ref|ZP_19892113.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE93]
gi|432699686|ref|ZP_19934840.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE169]
gi|432746298|ref|ZP_19980964.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE43]
gi|432938607|ref|ZP_20136885.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE183]
gi|432972458|ref|ZP_20161325.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE207]
gi|432986014|ref|ZP_20174737.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE215]
gi|433083213|ref|ZP_20269670.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE133]
gi|433101801|ref|ZP_20287887.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE145]
gi|433144845|ref|ZP_20329989.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE168]
gi|433189039|ref|ZP_20373137.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE88]
gi|305852025|gb|EFM52477.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli NC101]
gi|430906455|gb|ELC28055.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE16]
gi|430907470|gb|ELC28968.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE15]
gi|431041953|gb|ELD52448.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE224]
gi|431148239|gb|ELE49530.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE72]
gi|431180864|gb|ELE80751.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE86]
gi|431190879|gb|ELE90265.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE93]
gi|431243435|gb|ELF37822.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE169]
gi|431291337|gb|ELF81850.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE43]
gi|431463342|gb|ELH43535.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE183]
gi|431481960|gb|ELH61667.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE207]
gi|431500251|gb|ELH79267.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE215]
gi|431602105|gb|ELI71614.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE133]
gi|431619395|gb|ELI88319.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE145]
gi|431661540|gb|ELJ28353.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE168]
gi|431705745|gb|ELJ70335.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE88]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|422382156|ref|ZP_16462317.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 57-2]
gi|432732990|ref|ZP_19967823.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE45]
gi|432760076|ref|ZP_19994570.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE46]
gi|324006635|gb|EGB75854.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 57-2]
gi|431276177|gb|ELF67204.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE45]
gi|431307730|gb|ELF96020.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE46]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|15802804|ref|NP_288831.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EDL933]
gi|15832397|ref|NP_311170.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|168749666|ref|ZP_02774688.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4113]
gi|168755009|ref|ZP_02780016.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4401]
gi|168761304|ref|ZP_02786311.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4501]
gi|168767883|ref|ZP_02792890.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4486]
gi|168773017|ref|ZP_02798024.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4196]
gi|168780112|ref|ZP_02805119.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4076]
gi|168787165|ref|ZP_02812172.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC869]
gi|168798427|ref|ZP_02823434.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC508]
gi|195935634|ref|ZP_03081016.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4024]
gi|208809714|ref|ZP_03252051.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4206]
gi|208813824|ref|ZP_03255153.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4045]
gi|208821467|ref|ZP_03261787.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4042]
gi|209399006|ref|YP_002271667.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4115]
gi|217327888|ref|ZP_03443971.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254794150|ref|YP_003078987.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str.
TW14359]
gi|261223289|ref|ZP_05937570.1| bifunctional UDP-L-Ara4N formyltransferase [Escherichia coli
O157:H7 str. FRIK2000]
gi|261259161|ref|ZP_05951694.1| bifunctional UDP-L-Ara4N formyltransferase [Escherichia coli
O157:H7 str. FRIK966]
gi|291283500|ref|YP_003500318.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
O55:H7 str. CB9615]
gi|387507642|ref|YP_006159898.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O55:H7 str. RM12579]
gi|387883473|ref|YP_006313775.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli Xuzhou21]
gi|416310931|ref|ZP_11656666.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. 1044]
gi|416318175|ref|ZP_11660885.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC1212]
gi|416330599|ref|ZP_11669549.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. 1125]
gi|416775539|ref|ZP_11874379.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. G5101]
gi|416787199|ref|ZP_11879287.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H- str. 493-89]
gi|416798855|ref|ZP_11884204.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H- str. H 2687]
gi|416819757|ref|ZP_11893447.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O55:H7 str. USDA
5905]
gi|416830662|ref|ZP_11898735.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. LSU-61]
gi|419046554|ref|ZP_13593491.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3A]
gi|419051973|ref|ZP_13598845.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3B]
gi|419058006|ref|ZP_13604811.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3C]
gi|419063475|ref|ZP_13610203.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3D]
gi|419070372|ref|ZP_13615995.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3E]
gi|419076470|ref|ZP_13621988.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3F]
gi|419081459|ref|ZP_13626907.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4A]
gi|419087237|ref|ZP_13632594.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4B]
gi|419093530|ref|ZP_13638815.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4C]
gi|419099119|ref|ZP_13644318.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4D]
gi|419104828|ref|ZP_13649957.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4E]
gi|419110279|ref|ZP_13655337.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4F]
gi|419115594|ref|ZP_13660611.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC5A]
gi|419126840|ref|ZP_13671725.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC5C]
gi|419132279|ref|ZP_13677116.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC5D]
gi|419137312|ref|ZP_13682108.1| polymyxin resistance protein ArnA [Escherichia coli DEC5E]
gi|420270439|ref|ZP_14772797.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA22]
gi|420276273|ref|ZP_14778557.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA40]
gi|420281361|ref|ZP_14783599.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW06591]
gi|420287582|ref|ZP_14789773.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW10246]
gi|420293215|ref|ZP_14795338.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW11039]
gi|420299087|ref|ZP_14801136.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW09109]
gi|420305048|ref|ZP_14807044.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW10119]
gi|420310724|ref|ZP_14812657.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1738]
gi|420316050|ref|ZP_14817926.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1734]
gi|421813226|ref|ZP_16248948.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 8.0416]
gi|421819065|ref|ZP_16254563.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
10.0821]
gi|421824890|ref|ZP_16260257.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK920]
gi|421831793|ref|ZP_16267080.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA7]
gi|423725854|ref|ZP_17699961.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA31]
gi|424078291|ref|ZP_17815294.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA505]
gi|424084747|ref|ZP_17821257.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA517]
gi|424091228|ref|ZP_17827173.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1996]
gi|424097807|ref|ZP_17833142.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1985]
gi|424104005|ref|ZP_17838803.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1990]
gi|424110709|ref|ZP_17844966.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
93-001]
gi|424116597|ref|ZP_17850460.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA3]
gi|424122812|ref|ZP_17856159.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA5]
gi|424128952|ref|ZP_17861875.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA9]
gi|424135203|ref|ZP_17867689.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA10]
gi|424141806|ref|ZP_17873718.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA14]
gi|424148307|ref|ZP_17879691.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA15]
gi|424154112|ref|ZP_17885086.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA24]
gi|424247935|ref|ZP_17890569.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA25]
gi|424324749|ref|ZP_17896492.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA28]
gi|424450498|ref|ZP_17902220.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA32]
gi|424456693|ref|ZP_17907853.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA33]
gi|424463083|ref|ZP_17913557.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA39]
gi|424469441|ref|ZP_17919287.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA41]
gi|424475981|ref|ZP_17925323.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA42]
gi|424481733|ref|ZP_17930731.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW07945]
gi|424487882|ref|ZP_17936469.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW09098]
gi|424494477|ref|ZP_17942245.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW09195]
gi|424501252|ref|ZP_17948175.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4203]
gi|424507484|ref|ZP_17953913.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4196]
gi|424514812|ref|ZP_17959524.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW14313]
gi|424521131|ref|ZP_17965273.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW14301]
gi|424527022|ref|ZP_17970747.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4421]
gi|424533174|ref|ZP_17976533.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4422]
gi|424539190|ref|ZP_17982158.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4013]
gi|424545216|ref|ZP_17987661.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4402]
gi|424551467|ref|ZP_17993350.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4439]
gi|424557652|ref|ZP_17999088.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4436]
gi|424563999|ref|ZP_18005018.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4437]
gi|424570124|ref|ZP_18010708.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4448]
gi|424576286|ref|ZP_18016388.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1845]
gi|424582130|ref|ZP_18021798.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1863]
gi|425098849|ref|ZP_18501600.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
3.4870]
gi|425104978|ref|ZP_18507307.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
5.2239]
gi|425110895|ref|ZP_18512830.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 6.0172]
gi|425126838|ref|ZP_18528033.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
8.0586]
gi|425132598|ref|ZP_18533461.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
8.2524]
gi|425139064|ref|ZP_18539469.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 10.0833]
gi|425144925|ref|ZP_18544934.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
10.0869]
gi|425150969|ref|ZP_18550602.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
88.0221]
gi|425156853|ref|ZP_18556133.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA34]
gi|425163289|ref|ZP_18562184.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA506]
gi|425169022|ref|ZP_18567506.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA507]
gi|425175089|ref|ZP_18573218.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA504]
gi|425181120|ref|ZP_18578826.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1999]
gi|425187385|ref|ZP_18584668.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1997]
gi|425194155|ref|ZP_18590938.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
NE1487]
gi|425200590|ref|ZP_18596820.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
NE037]
gi|425207012|ref|ZP_18602824.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK2001]
gi|425212775|ref|ZP_18608185.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli PA4]
gi|425218895|ref|ZP_18613872.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA23]
gi|425225447|ref|ZP_18619924.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA49]
gi|425231711|ref|ZP_18625760.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA45]
gi|425237629|ref|ZP_18631358.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TT12B]
gi|425243846|ref|ZP_18637166.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
MA6]
gi|425249972|ref|ZP_18642921.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
5905]
gi|425255829|ref|ZP_18648364.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
CB7326]
gi|425262046|ref|ZP_18654076.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC96038]
gi|425268084|ref|ZP_18659728.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
5412]
gi|425295523|ref|ZP_18685740.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA38]
gi|425312187|ref|ZP_18701388.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1735]
gi|425318135|ref|ZP_18706944.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1736]
gi|425324236|ref|ZP_18712625.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1737]
gi|425330518|ref|ZP_18718406.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1846]
gi|425336682|ref|ZP_18724088.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1847]
gi|425343089|ref|ZP_18730006.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1848]
gi|425348890|ref|ZP_18735389.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1849]
gi|425355186|ref|ZP_18741276.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1850]
gi|425361146|ref|ZP_18746819.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1856]
gi|425367320|ref|ZP_18752515.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1862]
gi|425373694|ref|ZP_18758359.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1864]
gi|425386541|ref|ZP_18770120.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1866]
gi|425393263|ref|ZP_18776392.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1868]
gi|425399359|ref|ZP_18782088.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1869]
gi|425405440|ref|ZP_18787695.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1870]
gi|425411842|ref|ZP_18793633.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
NE098]
gi|425418175|ref|ZP_18799468.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK523]
gi|425429505|ref|ZP_18810130.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
0.1304]
gi|428947874|ref|ZP_19020180.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
88.1467]
gi|428953973|ref|ZP_19025788.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
88.1042]
gi|428959910|ref|ZP_19031244.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
89.0511]
gi|428966479|ref|ZP_19037257.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
90.0091]
gi|428972378|ref|ZP_19042740.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
90.0039]
gi|428978786|ref|ZP_19048629.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
90.2281]
gi|428984708|ref|ZP_19054119.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
93.0055]
gi|428990733|ref|ZP_19059739.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
93.0056]
gi|428996534|ref|ZP_19065162.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
94.0618]
gi|429002773|ref|ZP_19070934.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
95.0183]
gi|429008914|ref|ZP_19076457.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
95.1288]
gi|429015359|ref|ZP_19082279.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
95.0943]
gi|429021318|ref|ZP_19087856.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0428]
gi|429027321|ref|ZP_19093354.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0427]
gi|429033528|ref|ZP_19099070.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0939]
gi|429039628|ref|ZP_19104760.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0932]
gi|429045603|ref|ZP_19110333.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0107]
gi|429050932|ref|ZP_19115509.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
97.0003]
gi|429056267|ref|ZP_19120614.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
97.1742]
gi|429061806|ref|ZP_19125844.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
97.0007]
gi|429068109|ref|ZP_19131593.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0672]
gi|429074016|ref|ZP_19137279.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 99.0678]
gi|429079213|ref|ZP_19142359.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0713]
gi|429827214|ref|ZP_19358290.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0109]
gi|429833542|ref|ZP_19363935.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
97.0010]
gi|444925799|ref|ZP_21245114.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
09BKT078844]
gi|444931510|ref|ZP_21250564.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0814]
gi|444936917|ref|ZP_21255709.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0815]
gi|444942545|ref|ZP_21261078.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0816]
gi|444948129|ref|ZP_21266450.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0839]
gi|444953614|ref|ZP_21271723.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0848]
gi|444959100|ref|ZP_21276967.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1753]
gi|444964226|ref|ZP_21281856.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1775]
gi|444970235|ref|ZP_21287611.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1793]
gi|444975495|ref|ZP_21292638.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1805]
gi|444980963|ref|ZP_21297882.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
ATCC 700728]
gi|444986317|ref|ZP_21303109.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA11]
gi|444991614|ref|ZP_21308269.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA19]
gi|444996926|ref|ZP_21313436.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA13]
gi|445002481|ref|ZP_21318880.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA2]
gi|445007980|ref|ZP_21324232.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA47]
gi|445013009|ref|ZP_21329127.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA48]
gi|445018890|ref|ZP_21334865.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA8]
gi|445024397|ref|ZP_21340231.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
7.1982]
gi|445029668|ref|ZP_21345356.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1781]
gi|445035134|ref|ZP_21350675.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1762]
gi|445040759|ref|ZP_21356147.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA35]
gi|445045953|ref|ZP_21361217.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
3.4880]
gi|445051538|ref|ZP_21366599.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
95.0083]
gi|445057285|ref|ZP_21372155.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0670]
gi|452971924|ref|ZP_21970151.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4009]
gi|21542315|sp|Q8XDZ3.1|ARNA_ECO57 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723709|sp|B5YXP8.1|ARNA_ECO5E RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|12516601|gb|AAG57386.1|AE005458_3 putative transformylase [Escherichia coli O157:H7 str. EDL933]
gi|13362613|dbj|BAB36566.1| putative transformylase [Escherichia coli O157:H7 str. Sakai]
gi|187771097|gb|EDU34941.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4196]
gi|188016114|gb|EDU54236.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4113]
gi|189002204|gb|EDU71190.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4076]
gi|189357598|gb|EDU76017.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4401]
gi|189362879|gb|EDU81298.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4486]
gi|189368338|gb|EDU86754.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4501]
gi|189372920|gb|EDU91336.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC869]
gi|189379016|gb|EDU97432.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC508]
gi|208729515|gb|EDZ79116.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4206]
gi|208735101|gb|EDZ83788.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4045]
gi|208741590|gb|EDZ89272.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4042]
gi|209160406|gb|ACI37839.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC4115]
gi|209765348|gb|ACI80986.1| putative transformylase [Escherichia coli]
gi|209765350|gb|ACI80987.1| putative transformylase [Escherichia coli]
gi|209765352|gb|ACI80988.1| putative transformylase [Escherichia coli]
gi|209765354|gb|ACI80989.1| putative transformylase [Escherichia coli]
gi|209765356|gb|ACI80990.1| putative transformylase [Escherichia coli]
gi|217320255|gb|EEC28680.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|254593550|gb|ACT72911.1| bifunctional UDP-L-Ara4N formyltransferase [Escherichia coli
O157:H7 str. TW14359]
gi|290763373|gb|ADD57334.1| Bifunctional polymyxin resistance protein arnA [Includes:
UDP-4-amino- 4-deoxy-L-arabinose formyltransferase
(UDP-L-Ara4N formyltransferase) (ArnAFT)] [Escherichia
coli O55:H7 str. CB9615]
gi|320192122|gb|EFW66767.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. EC1212]
gi|320641084|gb|EFX10563.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. G5101]
gi|320646472|gb|EFX15391.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H- str. 493-89]
gi|320651569|gb|EFX19949.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H- str. H 2687]
gi|320663022|gb|EFX30339.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O55:H7 str. USDA
5905]
gi|320667840|gb|EFX34748.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. LSU-61]
gi|326339608|gb|EGD63419.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. 1125]
gi|326344070|gb|EGD67831.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O157:H7 str. 1044]
gi|374359636|gb|AEZ41343.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O55:H7 str. RM12579]
gi|377893384|gb|EHU57823.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3A]
gi|377893658|gb|EHU58092.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3B]
gi|377904593|gb|EHU68871.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3C]
gi|377909950|gb|EHU74148.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3D]
gi|377912202|gb|EHU76365.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3E]
gi|377921511|gb|EHU85510.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC3F]
gi|377926089|gb|EHU90024.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4A]
gi|377930427|gb|EHU94310.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4B]
gi|377941972|gb|EHV05709.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4C]
gi|377942229|gb|EHV05965.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4D]
gi|377947311|gb|EHV10978.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4E]
gi|377957161|gb|EHV20697.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC4F]
gi|377960188|gb|EHV23672.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC5A]
gi|377974952|gb|EHV38277.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC5C]
gi|377975242|gb|EHV38563.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC5D]
gi|377984305|gb|EHV47540.1| polymyxin resistance protein ArnA [Escherichia coli DEC5E]
gi|386796931|gb|AFJ29965.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli Xuzhou21]
gi|390641751|gb|EIN21175.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1996]
gi|390643228|gb|EIN22591.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA517]
gi|390644010|gb|EIN23310.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA505]
gi|390660570|gb|EIN38268.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
93-001]
gi|390662269|gb|EIN39886.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1985]
gi|390663976|gb|EIN41446.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1990]
gi|390677690|gb|EIN53700.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA3]
gi|390680921|gb|EIN56732.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA5]
gi|390683629|gb|EIN59289.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA9]
gi|390696900|gb|EIN71339.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA10]
gi|390700465|gb|EIN74766.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA15]
gi|390701503|gb|EIN75726.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA14]
gi|390713951|gb|EIN86865.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA22]
gi|390722958|gb|EIN95583.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA25]
gi|390724365|gb|EIN96922.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA24]
gi|390727717|gb|EIO00108.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA28]
gi|390742759|gb|EIO13754.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA31]
gi|390742978|gb|EIO13966.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA32]
gi|390745639|gb|EIO16428.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA33]
gi|390757683|gb|EIO27153.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA40]
gi|390767887|gb|EIO36953.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA41]
gi|390768976|gb|EIO37947.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA39]
gi|390769320|gb|EIO38255.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA42]
gi|390781648|gb|EIO49325.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW06591]
gi|390790339|gb|EIO57767.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW10246]
gi|390790851|gb|EIO58247.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW07945]
gi|390797301|gb|EIO64557.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW11039]
gi|390806389|gb|EIO73301.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW09098]
gi|390806782|gb|EIO73684.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW09109]
gi|390816070|gb|EIO82582.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW10119]
gi|390826127|gb|EIO91989.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4203]
gi|390830697|gb|EIO96202.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW09195]
gi|390831448|gb|EIO96825.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4196]
gi|390846067|gb|EIP09680.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW14301]
gi|390847049|gb|EIP10606.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TW14313]
gi|390850440|gb|EIP13815.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4421]
gi|390861099|gb|EIP23375.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4422]
gi|390865647|gb|EIP27647.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4013]
gi|390870898|gb|EIP32357.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4402]
gi|390878778|gb|EIP39595.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4439]
gi|390883826|gb|EIP44221.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4436]
gi|390893784|gb|EIP53323.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4437]
gi|390896019|gb|EIP55418.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC4448]
gi|390900003|gb|EIP59239.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1738]
gi|390908040|gb|EIP66881.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1734]
gi|390919364|gb|EIP77717.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1863]
gi|390920359|gb|EIP78631.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1845]
gi|408064165|gb|EKG98647.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA7]
gi|408067942|gb|EKH02370.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK920]
gi|408070932|gb|EKH05287.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA34]
gi|408078877|gb|EKH13005.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA506]
gi|408082703|gb|EKH16663.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA507]
gi|408091098|gb|EKH24332.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FDA504]
gi|408097560|gb|EKH30451.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1999]
gi|408104267|gb|EKH36589.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK1997]
gi|408108496|gb|EKH40499.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
NE1487]
gi|408115158|gb|EKH46624.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
NE037]
gi|408121329|gb|EKH52290.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK2001]
gi|408127303|gb|EKH57793.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli PA4]
gi|408137708|gb|EKH67403.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA23]
gi|408139848|gb|EKH69440.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA49]
gi|408146112|gb|EKH75255.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA45]
gi|408155178|gb|EKH83504.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
TT12B]
gi|408160125|gb|EKH88169.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
MA6]
gi|408163830|gb|EKH91677.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
5905]
gi|408173602|gb|EKI00622.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
CB7326]
gi|408180713|gb|EKI07318.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC96038]
gi|408182726|gb|EKI09210.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
5412]
gi|408217538|gb|EKI41780.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA38]
gi|408227455|gb|EKI51041.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1735]
gi|408238512|gb|EKI61306.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1736]
gi|408242948|gb|EKI65498.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1737]
gi|408247179|gb|EKI69396.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1846]
gi|408256432|gb|EKI77811.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1847]
gi|408259364|gb|EKI80551.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1848]
gi|408265757|gb|EKI86439.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1849]
gi|408275139|gb|EKI95121.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1850]
gi|408277342|gb|EKI97152.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1856]
gi|408286897|gb|EKJ05802.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1862]
gi|408291163|gb|EKJ09800.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1864]
gi|408308082|gb|EKJ25359.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1866]
gi|408308235|gb|EKJ25511.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1868]
gi|408319306|gb|EKJ35451.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1869]
gi|408326007|gb|EKJ41840.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
EC1870]
gi|408326846|gb|EKJ42615.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
NE098]
gi|408336687|gb|EKJ51441.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
FRIK523]
gi|408346246|gb|EKJ60542.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
0.1304]
gi|408550184|gb|EKK27529.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
5.2239]
gi|408550560|gb|EKK27883.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
3.4870]
gi|408551145|gb|EKK28432.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 6.0172]
gi|408569817|gb|EKK45802.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
8.0586]
gi|408579534|gb|EKK54987.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 10.0833]
gi|408581400|gb|EKK56744.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
8.2524]
gi|408591646|gb|EKK66067.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
10.0869]
gi|408596486|gb|EKK70616.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
88.0221]
gi|408601050|gb|EKK74866.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 8.0416]
gi|408612822|gb|EKK86156.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
10.0821]
gi|427205122|gb|EKV75382.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
88.1042]
gi|427207499|gb|EKV77668.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
89.0511]
gi|427208733|gb|EKV78822.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
88.1467]
gi|427222296|gb|EKV91088.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
90.0091]
gi|427224569|gb|EKV93274.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
90.2281]
gi|427228120|gb|EKV96604.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
90.0039]
gi|427242028|gb|EKW09446.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
93.0056]
gi|427242674|gb|EKW10077.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
93.0055]
gi|427246116|gb|EKW13336.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
94.0618]
gi|427261771|gb|EKW27688.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
95.0183]
gi|427262127|gb|EKW28032.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
95.0943]
gi|427264850|gb|EKW30480.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
95.1288]
gi|427276533|gb|EKW41102.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0428]
gi|427279724|gb|EKW44135.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0427]
gi|427283490|gb|EKW47698.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0939]
gi|427291994|gb|EKW55358.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0932]
gi|427299298|gb|EKW62273.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0107]
gi|427300536|gb|EKW63467.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
97.0003]
gi|427313385|gb|EKW75502.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
97.1742]
gi|427315832|gb|EKW77811.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
97.0007]
gi|427319799|gb|EKW81602.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0672]
gi|427328361|gb|EKW89728.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 99.0678]
gi|427329199|gb|EKW90530.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0713]
gi|429254009|gb|EKY38458.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
96.0109]
gi|429255705|gb|EKY40000.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
97.0010]
gi|444538398|gb|ELV18264.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0814]
gi|444539698|gb|ELV19407.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
09BKT078844]
gi|444547601|gb|ELV26176.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0815]
gi|444557485|gb|ELV34820.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0839]
gi|444558567|gb|ELV35845.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0816]
gi|444563626|gb|ELV40615.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0848]
gi|444573368|gb|ELV49746.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1753]
gi|444577756|gb|ELV53860.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1775]
gi|444579788|gb|ELV55765.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1793]
gi|444593491|gb|ELV68700.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA11]
gi|444593758|gb|ELV68965.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
ATCC 700728]
gi|444595614|gb|ELV70711.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1805]
gi|444607152|gb|ELV81738.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA13]
gi|444607483|gb|ELV82059.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA19]
gi|444616007|gb|ELV90183.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA2]
gi|444623880|gb|ELV97790.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA47]
gi|444624651|gb|ELV98533.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA48]
gi|444629874|gb|ELW03545.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA8]
gi|444638745|gb|ELW12072.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
7.1982]
gi|444642003|gb|ELW15219.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1781]
gi|444645375|gb|ELW18444.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.1762]
gi|444654584|gb|ELW27240.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
PA35]
gi|444660250|gb|ELW32623.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
3.4880]
gi|444664879|gb|ELW37040.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
95.0083]
gi|444670034|gb|ELW41968.1| bifunctional polymyxin resistance protein ArnA [Escherichia coli
99.0670]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHHCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|85059821|ref|YP_455523.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Sodalis glossinidius str.
'morsitans']
gi|123766408|sp|Q2NRV7.1|ARNA_SODGM RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|84780341|dbj|BAE75118.1| putative formyl transferase [Sodalis glossinidius str. 'morsitans']
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/376 (33%), Positives = 194/376 (51%), Gaps = 46/376 (12%)
Query: 10 LDGRPI----KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------H 57
L+ RP+ + + ++G GFIG+HL E++L + ++I LD+ D I H
Sbjct: 304 LNPRPLVSHKRRTRVLILGVNGFIGNHLTERLLRDGNYEIYGLDIGTDAISRFMVNPLFH 363
Query: 58 LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNF 117
+E + ++ I++H IK D+ + L AI TP +Y PL +F
Sbjct: 364 FVEGDISIHSEWIEYH-------------IKKCDIVLPLVAIATPIEYTRNPLRVFELDF 410
Query: 118 IDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
+ L ++++C + KR+I ST EVYG + DP V ED S I G
Sbjct: 411 EENLKIIRHCVKYQKRIIFPSTSEVYG------------MCTDP---VFDEDDSSLIVGP 455
Query: 178 IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237
I KQRW Y+ +KQL++R+++A G + GL FT+ RPFNW+GPR+D ++ G R +
Sbjct: 456 INKQRWIYSVSKQLLDRVLWAYGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAI 512
Query: 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEV 296
NL+ +KLVDGG +R F I D IEA+ +IEN +G I N+GNP NE
Sbjct: 513 TQLILNLVEGSHIKLVDGGAQKRCFTDISDGIEALFRIIENKDNNCDGQIINIGNPDNEA 572
Query: 297 TVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
++RQLAE++ + + + DV S +YG+GY D + R P + + LGW
Sbjct: 573 SIRQLAELLLASFERHPLRQHFPPFAGFRDVESSSYYGKGYQDVEHRKPSIRNAKRLLGW 632
Query: 355 NPKTSLWDLLESTLTY 370
P + ++ TL +
Sbjct: 633 APSVPMAQTIDETLDF 648
>gi|56554166|pdb|1U9J|A Chain A, Crystal Structure Of E. Coli Arna (Pmri) Decarboxylase
Domain
Length = 358
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 191/367 (52%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 16 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 75
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 76 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 122
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 123 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 167
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 168 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 224
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 225 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 284
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + ++ L W PK + + ++ T
Sbjct: 285 KHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDET 343
Query: 368 LTYQHRT 374
L + RT
Sbjct: 344 LDFFLRT 350
>gi|427809949|ref|ZP_18977014.1| putative transformylase [Escherichia coli]
gi|412970128|emb|CCJ44771.1| putative transformylase [Escherichia coli]
Length = 659
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 317 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 368
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 369 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLLIIRYCVKYRKRIIF 428
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 429 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 473
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 474 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 530
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 531 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 590
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 591 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 649
Query: 373 RT 374
RT
Sbjct: 650 RT 651
>gi|422829681|ref|ZP_16877846.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
B093]
gi|371608665|gb|EHN97217.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
B093]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 124/382 (32%), Positives = 196/382 (51%), Gaps = 50/382 (13%)
Query: 10 LDGRPI----KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L+ +P+ + + ++G GFIG+HL E++L E +++ LD+ +D I L
Sbjct: 304 LNSQPVCAARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------ 357
Query: 66 GADRIQFHRLNIK---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
+ FH + H +E +K D+ + L AI TP +Y PL +F + L
Sbjct: 358 --NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLR 415
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+++YC + KR+I ST EVYG + ED S I G + K R
Sbjct: 416 IIRYCVKYRKRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPR 460
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
W Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R +
Sbjct: 461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLIL 517
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQL 301
NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L
Sbjct: 518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEEL 577
Query: 302 AEMMTEVYAK---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL 352
EM+ + K +G +E S +YG+GY D + R P + + L
Sbjct: 578 GEMLLASFEKHPLRHYFPPFAGFRVVE-------SSSYYGKGYQDVEHRKPSIRNARRCL 630
Query: 353 GWNPKTSLWDLLESTLTYQHRT 374
W PK + + ++ TL + RT
Sbjct: 631 DWEPKIDMQETIDETLDFFLRT 652
>gi|222157010|ref|YP_002557149.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
LF82]
gi|222034015|emb|CAP76756.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
LF82]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 192/373 (51%), Gaps = 56/373 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 K---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
K +G +E S +YG+GY D + R P + + L W PK +
Sbjct: 587 KHPLRHYFPPFAGFRVVE-------SSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQ 639
Query: 362 DLLESTLTYQHRT 374
+ ++ TL + RT
Sbjct: 640 ETIDETLDFFLRT 652
>gi|432750730|ref|ZP_19985334.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE29]
gi|431296712|gb|ELF86423.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE29]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|417155189|ref|ZP_11993318.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 96.0497]
gi|417581773|ref|ZP_12232575.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_B2F1]
gi|417667669|ref|ZP_12317214.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_O31]
gi|345337544|gb|EGW69976.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_B2F1]
gi|386168278|gb|EIH34794.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 96.0497]
gi|397784815|gb|EJK95668.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_O31]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|416809226|ref|ZP_11888889.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O55:H7 str. 3256-97]
gi|419121222|ref|ZP_13666178.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC5B]
gi|320657321|gb|EFX25123.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|377966446|gb|EHV29857.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Escherichia coli DEC5B]
Length = 660
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHHCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|218690418|ref|YP_002398630.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli ED1a]
gi|254806286|sp|B7MXT6.1|ARNA_ECO81 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218427982|emb|CAR08902.2| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli ED1a]
Length = 660
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|146311730|ref|YP_001176804.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Enterobacter sp. 638]
gi|166988215|sp|A4WAM3.1|ARNA_ENT38 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|145318606|gb|ABP60753.1| NAD-dependent epimerase/dehydratase [Enterobacter sp. 638]
Length = 660
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/359 (33%), Positives = 190/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I + G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFEVYGLDIGSDAISRFI------GNSRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D V ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------MCSDK---------VFDEDHSNLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN + +G I N+GNP NE ++++LAEM+ + K +
Sbjct: 534 KRCFTDISDGIEALFRIIENKNSNCDGQIINIGNPDNEASIKELAEMLLASFEKHPLRNH 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + ++ + W P + ++ TL + +T
Sbjct: 594 FPPFAGFREVESSTYYGKGYQDVEHRKPSIRNAHRLISWTPTVEMEKTIDETLDFFLKT 652
>gi|419914514|ref|ZP_14432909.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli KD1]
gi|388386259|gb|EIL47909.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli KD1]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|432441751|ref|ZP_19684091.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE189]
gi|432446867|ref|ZP_19689166.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE191]
gi|433014520|ref|ZP_20202868.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE104]
gi|433024140|ref|ZP_20212127.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE106]
gi|430966205|gb|ELC83613.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE189]
gi|430973140|gb|ELC90108.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE191]
gi|431530618|gb|ELI07297.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE104]
gi|431535212|gb|ELI11593.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE106]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|427805391|ref|ZP_18972458.1| putative transformylase [Escherichia coli chi7122]
gi|443618332|ref|YP_007382188.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli APEC O78]
gi|412963573|emb|CCK47498.1| putative transformylase [Escherichia coli chi7122]
gi|443422840|gb|AGC87744.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli APEC O78]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLLIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|300926358|ref|ZP_07142158.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 182-1]
gi|301328743|ref|ZP_07221796.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 78-1]
gi|417602862|ref|ZP_12253432.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_94C]
gi|422956382|ref|ZP_16968856.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
H494]
gi|450218595|ref|ZP_21895969.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O08]
gi|300417635|gb|EFK00946.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 182-1]
gi|300844891|gb|EFK72651.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 78-1]
gi|345350528|gb|EGW82803.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_94C]
gi|371599917|gb|EHN88695.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
H494]
gi|449317655|gb|EMD07740.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O08]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|170682848|ref|YP_001744454.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SMS-3-5]
gi|226723715|sp|B1LLK9.1|ARNA_ECOSM RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|170520566|gb|ACB18744.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SMS-3-5]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|422834583|ref|ZP_16882644.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
E101]
gi|371601375|gb|EHN90125.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
E101]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCGDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|424815689|ref|ZP_18240840.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia fergusonii ECD227]
gi|325496709|gb|EGC94568.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia fergusonii ECD227]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 194/374 (51%), Gaps = 34/374 (9%)
Query: 10 LDGRPIKPVT----ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L+ +P+ V + ++G GFIG+HL E++L E +++ LD+ +D I L +
Sbjct: 304 LNSQPVCTVQRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLTHPN-- 361
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
F +I H +E IK D+ + L AI TP +Y PL +F + L ++
Sbjct: 362 ----FHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRII 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + +KR+I ST EVYG F ED S I G I K RW
Sbjct: 418 RYCVQYHKRIIFPSTSEVYGMCTDKFF---------------DEDHSNLIVGPINKPRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L +
Sbjct: 520 VEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENTGNRCDGEIINIGNPDNEASIEELGK 579
Query: 304 MMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
M+ + K P V S +YG+GY D + R P + + L W P +
Sbjct: 580 MLLASFDKHPLRQHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPTIDM 638
Query: 361 WDLLESTLTYQHRT 374
+ ++ TL + RT
Sbjct: 639 QETIDETLDFFLRT 652
>gi|300936818|ref|ZP_07151709.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 21-1]
gi|432680871|ref|ZP_19916245.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE143]
gi|300458061|gb|EFK21554.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 21-1]
gi|431220268|gb|ELF17648.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE143]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432554345|ref|ZP_19791068.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE47]
gi|431084150|gb|ELD90321.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE47]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|329913479|ref|ZP_08275948.1| Polymyxin resistance protein ArnA-DH, UDP-glucuronic acid
decarboxylase [Oxalobacteraceae bacterium IMCC9480]
gi|327545337|gb|EGF30572.1| Polymyxin resistance protein ArnA-DH, UDP-glucuronic acid
decarboxylase [Oxalobacteraceae bacterium IMCC9480]
Length = 350
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 197/355 (55%), Gaps = 29/355 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE-PESQTGADRIQFHRLNIK 78
+ ++G GFIG HL ++IL T + +D+ +D+I LL+ P+ ++ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMMSDRITELLDNPDFKS---RMHFFEGDIT 60
Query: 79 -HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ +E +K D+ + L AI TP+ Y +PL +F LP+V+ ++ K L+
Sbjct: 61 INKEWVEYHVKKCDVILPLVAIATPSTYVKQPLRVFELDFEANLPIVRSAAKYGKHLVFP 120
Query: 138 STCEVYGKTIGS-FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG F P++S L I G I K RW Y+C+KQL++R+I
Sbjct: 121 STSEVYGMCHDDEFDPEESEL----------------ICGPINKPRWIYSCSKQLMDRVI 164
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+ G E GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGG
Sbjct: 165 WGYGME-GLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGG 220
Query: 257 QSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS-- 313
+ +R F YI D I+A++ +I N A G I+N+GNP N ++R LA MM + A
Sbjct: 221 EQKRAFTYIDDGIDALIKIIANKDGIATGKIYNIGNPVNNYSIRDLAAMMLTLAADYPEY 280
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A + ++ +S +YG+GY D R+P +T ++L WNP T++ D L +
Sbjct: 281 ADSAKKVELIETTSAAYYGKGYQDVQNRVPKITNTCEELNWNPTTTMPDTLRNIF 335
>gi|218548295|ref|YP_002382086.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia fergusonii ATCC 35469]
gi|226723717|sp|B7LM76.1|ARNA_ESCF3 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218355836|emb|CAQ88449.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia fergusonii ATCC 35469]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 194/374 (51%), Gaps = 34/374 (9%)
Query: 10 LDGRPIKPVT----ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L+ +P+ V + ++G GFIG+HL E++L E +++ LD+ +D I L +
Sbjct: 304 LNSQPVCTVQRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLTHPN-- 361
Query: 66 GADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVV 124
F +I H +E IK D+ + L AI TP +Y PL +F + L ++
Sbjct: 362 ----FHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRII 417
Query: 125 KYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWS 184
+YC + +KR+I ST EVYG F ED S I G I K RW
Sbjct: 418 RYCVQYHKRIIFPSTSEVYGMCTDKFF---------------DEDHSNLIVGPINKPRWI 462
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNL 519
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L +
Sbjct: 520 VEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENTGNRCDGEIINIGNPDNEASIEELGK 579
Query: 304 MMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
M+ + K P V S +YG+GY D + R P + + L W P +
Sbjct: 580 MLLASFDKHPLRQHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPTIDM 638
Query: 361 WDLLESTLTYQHRT 374
+ ++ TL + RT
Sbjct: 639 QETIDETLDFFLRT 652
>gi|432948129|ref|ZP_20143285.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE196]
gi|433043833|ref|ZP_20231328.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE117]
gi|431458107|gb|ELH38444.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE196]
gi|431555671|gb|ELI29510.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE117]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|387617615|ref|YP_006120637.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O83:H1 str. NRG
857C]
gi|312946876|gb|ADR27703.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O83:H1 str. NRG
857C]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|74312777|ref|YP_311196.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella sonnei Ss046]
gi|383179228|ref|YP_005457233.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella sonnei 53G]
gi|414576872|ref|ZP_11434054.1| bifunctional polymyxin resistance protein ArnA [Shigella sonnei
3233-85]
gi|415844467|ref|ZP_11524209.1| bifunctional polymyxin resistance protein arnA [Shigella sonnei
53G]
gi|418266659|ref|ZP_12886140.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella sonnei str. Moseley]
gi|420359337|ref|ZP_14860311.1| bifunctional polymyxin resistance protein ArnA [Shigella sonnei
3226-85]
gi|123759587|sp|Q3YZV1.1|ARNA_SHISS RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|73856254|gb|AAZ88961.1| putative transformylase [Shigella sonnei Ss046]
gi|323168579|gb|EFZ54259.1| bifunctional polymyxin resistance protein arnA [Shigella sonnei
53G]
gi|391282018|gb|EIQ40655.1| bifunctional polymyxin resistance protein ArnA [Shigella sonnei
3226-85]
gi|391284625|gb|EIQ43220.1| bifunctional polymyxin resistance protein ArnA [Shigella sonnei
3233-85]
gi|397899484|gb|EJL15858.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella sonnei str. Moseley]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432602811|ref|ZP_19839055.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE66]
gi|431141385|gb|ELE43150.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE66]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|419930952|ref|ZP_14448543.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 541-1]
gi|388399205|gb|EIL60007.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 541-1]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432543868|ref|ZP_19780711.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE236]
gi|432549358|ref|ZP_19786126.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE237]
gi|432622508|ref|ZP_19858539.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE76]
gi|432719378|ref|ZP_19954347.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE9]
gi|432816011|ref|ZP_20049795.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE115]
gi|431074278|gb|ELD81842.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE236]
gi|431079636|gb|ELD86590.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE237]
gi|431159308|gb|ELE59865.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE76]
gi|431263190|gb|ELF55179.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE9]
gi|431364235|gb|ELG50779.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE115]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMHETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|395647451|ref|ZP_10435301.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 663
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 195/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVFGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDVCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRSNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIENAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMSETIGNTLDF 650
>gi|422780826|ref|ZP_16833611.1| NAD dependent epimerase/dehydratase [Escherichia coli TW10509]
gi|323977544|gb|EGB72630.1| NAD dependent epimerase/dehydratase [Escherichia coli TW10509]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|331673768|ref|ZP_08374531.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA280]
gi|331069041|gb|EGI40433.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA280]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|429212877|ref|ZP_19204042.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas sp. M1]
gi|428157359|gb|EKX03907.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas sp. M1]
Length = 667
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 202/398 (50%), Gaps = 51/398 (12%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HL 58
RL G+P + + ++G GFIG+HL E++L + +++ LD+ +D I+ H
Sbjct: 306 RLHAVGKPRRKTRVLILGVNGFIGNHLSERLLRDGHYEVYGLDIGSDAIERLKSNPDFHF 365
Query: 59 LEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFI 118
+E + + I++H IK D+ + L AI TP +Y PL +F
Sbjct: 366 VEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFELDFE 412
Query: 119 DALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSI 178
+ L +V+YC + KR+I ST EVYG D ++ ED+S + G I
Sbjct: 413 ENLKLVRYCVKYGKRVIFPSTSEVYGMC------------SDASF---DEDSSNLVVGPI 457
Query: 179 EKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238
KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 458 NKQRWIYSVSKQLLDRVIWAYG-QKGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAIT 513
Query: 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVT 297
+L+ P++LVDGG +R F + D IEA+ +++N R +G I N+GNP NE +
Sbjct: 514 QLILHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIVDNDGGRCDGQIVNIGNPDNEAS 573
Query: 298 VRQLAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
+R+L E + + A A E V S+ FYG+GY D R P + +
Sbjct: 574 IRELGEELLRQFEAHPLRAHFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRL 629
Query: 352 LGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
L W PK + + + TL + R +QA +AS
Sbjct: 630 LDWEPKVHMRETIAKTLDFFLREAIAEQQQAGKLRIAS 667
>gi|432802474|ref|ZP_20036453.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE84]
gi|431348263|gb|ELG35121.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE84]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432895272|ref|ZP_20106992.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE165]
gi|431421639|gb|ELH03851.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE165]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|386619876|ref|YP_006139456.1| putative formylase [Escherichia coli NA114]
gi|387830188|ref|YP_003350125.1| putative formyltransferase [Escherichia coli SE15]
gi|432422603|ref|ZP_19665148.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE178]
gi|432500741|ref|ZP_19742498.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE216]
gi|432559505|ref|ZP_19796174.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE49]
gi|432695116|ref|ZP_19930315.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE162]
gi|432711308|ref|ZP_19946368.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE6]
gi|432919718|ref|ZP_20123832.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE173]
gi|432927621|ref|ZP_20129050.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE175]
gi|432981683|ref|ZP_20170458.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE211]
gi|433097125|ref|ZP_20283309.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE139]
gi|433106547|ref|ZP_20292522.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE148]
gi|281179345|dbj|BAI55675.1| putative formyltransferase [Escherichia coli SE15]
gi|333970377|gb|AEG37182.1| putative formylase [Escherichia coli NA114]
gi|430944215|gb|ELC64314.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE178]
gi|431028318|gb|ELD41362.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE216]
gi|431090725|gb|ELD96476.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE49]
gi|431233698|gb|ELF29285.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE162]
gi|431248988|gb|ELF43163.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE6]
gi|431443762|gb|ELH24788.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE173]
gi|431444144|gb|ELH25168.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE175]
gi|431490992|gb|ELH70599.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE211]
gi|431615473|gb|ELI84602.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE139]
gi|431627254|gb|ELI95665.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE148]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|258598045|gb|ACV83328.1| UDP-glucuronic acid decarboxylase [Proteus mirabilis]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 193/365 (52%), Gaps = 30/365 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + G R F ++
Sbjct: 318 VLILGVNGFIGNHLTERLLKDGNYDIYGMDIGSSAIERFI------GNPRFHFIEGDVSI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL+ R+I A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDNSRLIVGPINKQRWIYSVSKQLLVRVICA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGID-GPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G + GL+FT+ RPFNW+GPR+D + G S G+ +++ NL+ P+KLVDGG+
Sbjct: 477 YGDKEGLKFTLFRPFNWMGPRLDNLNSARIGSSRGITQLIL----NLVEGSPIKLVDGGE 532
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSG 314
+R F I D IEA+ +IEN + G I N+GNP NE ++R+LAEM+ + + K + G
Sbjct: 533 QKRCFSDINDGIEALFRIIENSDNKCGGQIINIGNPTNEASIRELAEMLLDCFEKHELRG 592
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+ S +YG+GY D + R P + + L W P +E TL + R
Sbjct: 593 HFPPFAGFKKIESSRYYGKGYQDVEPRKPSIKNAERILDWKPTIETRQTVEETLDFFLRG 652
Query: 375 YAEAI 379
E +
Sbjct: 653 AVEEL 657
>gi|167549705|ref|ZP_02343464.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
gi|205325391|gb|EDZ13230.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Saintpaul str. SARA29]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + + G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLIFGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|432392772|ref|ZP_19635602.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE21]
gi|430917928|gb|ELC38967.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE21]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMHETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|416898323|ref|ZP_11927887.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_7v]
gi|417115048|ref|ZP_11966184.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 1.2741]
gi|422799563|ref|ZP_16848062.1| NAD dependent epimerase/dehydratase [Escherichia coli M863]
gi|323967698|gb|EGB63110.1| NAD dependent epimerase/dehydratase [Escherichia coli M863]
gi|327252527|gb|EGE64186.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_7v]
gi|386140467|gb|EIG81619.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 1.2741]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|422806250|ref|ZP_16854682.1| NAD dependent epimerase/dehydratase [Escherichia fergusonii B253]
gi|324112788|gb|EGC06764.1| NAD dependent epimerase/dehydratase [Escherichia fergusonii B253]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 188/360 (52%), Gaps = 30/360 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLTHPN------FHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++YC + +KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVQYHKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG F ED S I G I K RW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDKFF---------------DEDHSNLIVGPINKPRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 477 YGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L +M+ + K
Sbjct: 534 KRCFTDIRDGIEALYRIIENTGNRCDGEIINIGNPDNEASIEELGKMLLASFDKHPLRQH 593
Query: 318 LEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V S +YG+GY D + R P + + L W P + + ++ TL + RT
Sbjct: 594 F-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPTIDMQETIDETLDFFLRT 652
>gi|432466415|ref|ZP_19708503.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE205]
gi|432584510|ref|ZP_19820904.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE57]
gi|433073455|ref|ZP_20260109.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE129]
gi|433120854|ref|ZP_20306526.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE157]
gi|433183927|ref|ZP_20368177.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE85]
gi|430993221|gb|ELD09575.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE205]
gi|431115869|gb|ELE19363.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE57]
gi|431587729|gb|ELI59081.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE129]
gi|431642455|gb|ELJ10178.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE157]
gi|431706177|gb|ELJ70751.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE85]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432661493|ref|ZP_19897137.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE111]
gi|431199230|gb|ELE97983.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE111]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|419863615|ref|ZP_14386132.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O103:H25 str.
CVM9340]
gi|388342117|gb|EIL08178.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O103:H25 str.
CVM9340]
Length = 660
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|399001406|ref|ZP_10704120.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM18]
gi|398127528|gb|EJM16935.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM18]
Length = 664
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/379 (33%), Positives = 197/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---DEDSSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSISKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRDNFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWAPTVEMKETIGNTLDF 650
>gi|395497332|ref|ZP_10428911.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas sp. PAMC 25886]
Length = 663
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + ++I LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEIYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDNCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRSNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIENAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMSETIGNTLDF 650
>gi|422334254|ref|ZP_16415261.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
4_1_47FAA]
gi|373244799|gb|EHP64278.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
4_1_47FAA]
Length = 660
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|417519460|ref|ZP_12181601.1| UDP-glucuronic acid decarboxylase [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353646579|gb|EHC89950.1| UDP-glucuronic acid decarboxylase [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 660
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/366 (34%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRGYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|432793473|ref|ZP_20027557.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE78]
gi|432799431|ref|ZP_20033453.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE79]
gi|431339136|gb|ELG26198.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE78]
gi|431343297|gb|ELG30261.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE79]
Length = 660
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|227887314|ref|ZP_04005119.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 83972]
gi|386639828|ref|YP_006106626.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli ABU 83972]
gi|227835664|gb|EEJ46130.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 83972]
gi|307554320|gb|ADN47095.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli ABU 83972]
Length = 660
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|432771220|ref|ZP_20005559.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE50]
gi|431314917|gb|ELG02849.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE50]
Length = 660
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKNDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|398984264|ref|ZP_10690533.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM24]
gi|399011972|ref|ZP_10714300.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM16]
gi|398116578|gb|EJM06337.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM16]
gi|398155963|gb|EJM44390.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM24]
Length = 663
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I
Sbjct: 304 GSLLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIDRLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 HFHYVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDKHF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A GA+ GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSVSKQLLDRVIWAYGAK-GLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D + R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRDNFPPFAGFRDVESKAFYGAGYQDVEHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWTPTVEMRETIGNTLDF 650
>gi|433198890|ref|ZP_20382792.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE94]
gi|431721594|gb|ELJ85588.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE94]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|331658338|ref|ZP_08359300.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA206]
gi|432899274|ref|ZP_20109966.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE192]
gi|433029231|ref|ZP_20217090.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE109]
gi|331056586|gb|EGI28595.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA206]
gi|431426926|gb|ELH08970.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE192]
gi|431542971|gb|ELI17967.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE109]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|218705788|ref|YP_002413307.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli UMN026]
gi|293405723|ref|ZP_06649715.1| polymyxin resistance protein ArnA_DH [Escherichia coli FVEC1412]
gi|298381406|ref|ZP_06991005.1| polymyxin resistance protein ArnA_DH [Escherichia coli FVEC1302]
gi|300896929|ref|ZP_07115412.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 198-1]
gi|417587274|ref|ZP_12238044.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_C165-02]
gi|419932907|ref|ZP_14450183.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 576-1]
gi|432354197|ref|ZP_19597470.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE2]
gi|432402549|ref|ZP_19645301.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE26]
gi|432426813|ref|ZP_19669314.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE181]
gi|432461279|ref|ZP_19703428.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE204]
gi|432476504|ref|ZP_19718502.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE208]
gi|432489934|ref|ZP_19731808.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE213]
gi|432518328|ref|ZP_19755516.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE228]
gi|432538449|ref|ZP_19775351.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE235]
gi|432632044|ref|ZP_19867970.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE80]
gi|432641758|ref|ZP_19877592.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE83]
gi|432666653|ref|ZP_19902234.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE116]
gi|432775350|ref|ZP_20009621.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE54]
gi|432839942|ref|ZP_20073428.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE140]
gi|432887239|ref|ZP_20101313.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE158]
gi|432913437|ref|ZP_20119134.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE190]
gi|433019332|ref|ZP_20207547.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE105]
gi|433053865|ref|ZP_20241044.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE122]
gi|433068570|ref|ZP_20255359.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE128]
gi|433159302|ref|ZP_20344139.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE177]
gi|433179113|ref|ZP_20363512.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE82]
gi|433203874|ref|ZP_20387649.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE95]
gi|226723713|sp|B7N5M0.1|ARNA_ECOLU RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218432885|emb|CAR13779.1| fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase
[Escherichia coli UMN026]
gi|291427931|gb|EFF00958.1| polymyxin resistance protein ArnA_DH [Escherichia coli FVEC1412]
gi|298278848|gb|EFI20362.1| polymyxin resistance protein ArnA_DH [Escherichia coli FVEC1302]
gi|300359240|gb|EFJ75110.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 198-1]
gi|345336410|gb|EGW68846.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
STEC_C165-02]
gi|388414994|gb|EIL74935.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli 576-1]
gi|430875370|gb|ELB98912.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE2]
gi|430925020|gb|ELC45693.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE26]
gi|430955745|gb|ELC74527.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE181]
gi|430988969|gb|ELD05438.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE204]
gi|431005120|gb|ELD20328.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE208]
gi|431020551|gb|ELD33896.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE213]
gi|431050950|gb|ELD60626.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE228]
gi|431069338|gb|ELD77667.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE235]
gi|431170244|gb|ELE70438.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE80]
gi|431181641|gb|ELE81503.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE83]
gi|431200947|gb|ELE99665.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE116]
gi|431317962|gb|ELG05731.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE54]
gi|431389115|gb|ELG72830.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE140]
gi|431416237|gb|ELG98724.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE158]
gi|431439737|gb|ELH21070.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE190]
gi|431530809|gb|ELI07485.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE105]
gi|431569937|gb|ELI42866.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE122]
gi|431583642|gb|ELI55637.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE128]
gi|431677534|gb|ELJ43609.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE177]
gi|431700933|gb|ELJ65857.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE82]
gi|431721053|gb|ELJ85052.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE95]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|432862852|ref|ZP_20087141.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE146]
gi|431404891|gb|ELG88137.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE146]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|398995532|ref|ZP_10698413.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM21]
gi|398129662|gb|EJM19019.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM21]
Length = 668
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 195/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDQYEVYGLDIGSDAIDRLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 HFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDKNF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSISKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNENDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRDNFPPFAGFRDVESKAFYGAGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWAPTVEMSETIGNTLDF 650
>gi|411010497|ref|ZP_11386826.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Aeromonas aquariorum AAK1]
Length = 663
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 194/365 (53%), Gaps = 34/365 (9%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF 72
R + + ++G GFIG+HL E++L + +++ LD+ + + + G F
Sbjct: 313 RKARLTRVLILGVNGFIGNHLTERLLQDGGYEVYGLDIGSSAVDRFI------GHPNFHF 366
Query: 73 HRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+I H +E IK D+ + L AI TP +Y PL +F + L +V+YC + +
Sbjct: 367 VEGDISIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYH 426
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + D ++ ED+S I G I KQRW Y+ +KQL
Sbjct: 427 KRIIFPSTSEVYG------------MCDDHSF---DEDSSRLIVGPINKQRWIYSVSKQL 471
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL FT+ RPFNW+GPR+D +D G R + NL+ P++
Sbjct: 472 LDRVIWAYGKKEGLNFTLFRPFNWMGPRLD---SLDSARIGSSRAITQLILNLVDGTPIQ 528
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
LVDGG +R F I+D IEA+ +IEN R +G I N+GNP NE +++Q+AE++ A
Sbjct: 529 LVDGGAQKRCFTDIEDGIEALFRIIENKGNRCDGQIINIGNPDNEASIQQMAEIL---LA 585
Query: 311 KVSGEAALEE--PTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
K ++ P V SK FYG+GY D R P + + L W P + + +
Sbjct: 586 KFEAHPLRDQFPPFAGFKLVESKSFYGDGYQDVSHRRPSIANARRLLDWEPTIEMEETIG 645
Query: 366 STLTY 370
+TL +
Sbjct: 646 NTLDF 650
>gi|301024033|ref|ZP_07187749.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 69-1]
gi|419920586|ref|ZP_14438698.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli KD2]
gi|300396765|gb|EFJ80303.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 69-1]
gi|388384470|gb|EIL46199.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli KD2]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCNDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|421142921|ref|ZP_15602886.1| hypothetical protein MHB_26225 [Pseudomonas fluorescens BBc6R8]
gi|404505838|gb|EKA19843.1| hypothetical protein MHB_26225 [Pseudomonas fluorescens BBc6R8]
Length = 663
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + ++I LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEIYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDNCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRSNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIDNAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMSETIGNTLDF 650
>gi|417138903|ref|ZP_11982430.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 97.0259]
gi|417308722|ref|ZP_12095563.1| Bifunctional polymyxin resistance protein ArnA [Escherichia coli
PCN033]
gi|338769350|gb|EGP24129.1| Bifunctional polymyxin resistance protein ArnA [Escherichia coli
PCN033]
gi|386157548|gb|EIH13888.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 97.0259]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|415778317|ref|ZP_11489363.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
3431]
gi|315615520|gb|EFU96152.1| bifunctional polymyxin resistance protein arnA [Escherichia coli
3431]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 191/367 (52%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIYSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + ++ L W PK + + ++ T
Sbjct: 587 KHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|432457362|ref|ZP_19699546.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE201]
gi|433058773|ref|ZP_20245819.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE124]
gi|430982096|gb|ELC98815.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE201]
gi|431569028|gb|ELI41990.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE124]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|26248643|ref|NP_754683.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli CFT073]
gi|300983317|ref|ZP_07176531.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 45-1]
gi|301049009|ref|ZP_07195996.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 185-1]
gi|386630052|ref|YP_006149772.1| bifunctional UDP-glucuronic acid [Escherichia coli str. 'clone D
i2']
gi|386634972|ref|YP_006154691.1| bifunctional UDP-glucuronic acid [Escherichia coli str. 'clone D
i14']
gi|422365086|ref|ZP_16445590.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 153-1]
gi|432412467|ref|ZP_19655130.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE39]
gi|432432543|ref|ZP_19674972.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE187]
gi|432436980|ref|ZP_19679368.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE188]
gi|432496363|ref|ZP_19738159.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE214]
gi|432505101|ref|ZP_19746825.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE220]
gi|432524452|ref|ZP_19761580.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE230]
gi|432569334|ref|ZP_19805846.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE53]
gi|432593520|ref|ZP_19829837.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE60]
gi|432608141|ref|ZP_19844326.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE67]
gi|432651827|ref|ZP_19887581.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE87]
gi|432784220|ref|ZP_20018399.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE63]
gi|432845225|ref|ZP_20078058.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE141]
gi|432974402|ref|ZP_20163241.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE209]
gi|432995990|ref|ZP_20184595.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE218]
gi|433000577|ref|ZP_20189102.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE223]
gi|433087934|ref|ZP_20274305.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE137]
gi|433116188|ref|ZP_20301979.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE153]
gi|433125856|ref|ZP_20311415.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE160]
gi|433139925|ref|ZP_20325181.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE167]
gi|433149842|ref|ZP_20334863.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE174]
gi|433208429|ref|ZP_20392103.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE97]
gi|433213165|ref|ZP_20396755.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE99]
gi|442608033|ref|ZP_21022793.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Escherichia coli Nissle 1917]
gi|81590105|sp|Q8FFM1.1|ARNA_ECOL6 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|26109048|gb|AAN81251.1|AE016763_210 Hypothetical protein yfbG [Escherichia coli CFT073]
gi|300299201|gb|EFJ55586.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 185-1]
gi|300408575|gb|EFJ92113.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 45-1]
gi|315292207|gb|EFU51559.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 153-1]
gi|355420951|gb|AER85148.1| bifunctional UDP-glucuronic acid [Escherichia coli str. 'clone D
i2']
gi|355425871|gb|AER90067.1| bifunctional UDP-glucuronic acid [Escherichia coli str. 'clone D
i14']
gi|430934874|gb|ELC55221.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE39]
gi|430952968|gb|ELC71882.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE187]
gi|430962311|gb|ELC80168.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE188]
gi|431023621|gb|ELD36816.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE214]
gi|431038195|gb|ELD49164.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE220]
gi|431051568|gb|ELD61231.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE230]
gi|431100048|gb|ELE05064.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE53]
gi|431127620|gb|ELE29920.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE60]
gi|431138027|gb|ELE39867.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE67]
gi|431190274|gb|ELE89674.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE87]
gi|431328643|gb|ELG15947.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE63]
gi|431394647|gb|ELG78180.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE141]
gi|431489263|gb|ELH68891.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE209]
gi|431505550|gb|ELH84156.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE218]
gi|431508563|gb|ELH86835.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE223]
gi|431604445|gb|ELI73854.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE137]
gi|431633950|gb|ELJ02212.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE153]
gi|431645090|gb|ELJ12743.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE160]
gi|431660238|gb|ELJ27126.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE167]
gi|431670511|gb|ELJ36864.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE174]
gi|431729714|gb|ELJ93333.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE97]
gi|431734190|gb|ELJ97591.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE99]
gi|441710638|emb|CCQ08770.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Escherichia coli Nissle 1917]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|432869622|ref|ZP_20090215.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE147]
gi|431410208|gb|ELG93370.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE147]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|331663770|ref|ZP_08364680.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA143]
gi|387607946|ref|YP_006096802.1| bifunctional polymyxin resistance protein [includes:
UDP-4-amino-4-deoxy-l-arabinose formyltransferase;
UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating] [Escherichia coli 042]
gi|432962426|ref|ZP_20152079.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE202]
gi|433063719|ref|ZP_20250641.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE125]
gi|284922246|emb|CBG35330.1| bifunctional polymyxin resistance protein [includes:
UDP-4-amino-4-deoxy-l-arabinose formyltransferase;
UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating] [Escherichia coli 042]
gi|331059569|gb|EGI31546.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli TA143]
gi|431474217|gb|ELH54039.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE202]
gi|431581373|gb|ELI53824.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE125]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPDNEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|395763363|ref|ZP_10444032.1| NAD-dependent epimerase/dehydratase family protein
[Janthinobacterium lividum PAMC 25724]
Length = 350
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 194/364 (53%), Gaps = 27/364 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ D+I LLE ++ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMNTDRITELLEDDNYK--SRMHFFEGDITI 61
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y +PL +F LP+V+ ++ K L+ S
Sbjct: 62 NKEWVEYHVKKCDVILPLVAIATPSTYVKQPLRVFELDFEANLPIVRSAAKYGKHLVFPS 121
Query: 139 TCEVYGKTIGS-FLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG F P++S L I G I K RW Y+ AKQL++R+I+
Sbjct: 122 TSEVYGMCHDEEFDPENSEL----------------ICGPINKPRWIYSNAKQLMDRVIW 165
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGG
Sbjct: 166 GYGME-GLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGGA 221
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV--SG 314
+R F YI D I+A++ +I N A+G I+N+GNP N ++R LA MM + A+
Sbjct: 222 QKRAFTYIDDGIDALIRIIANKNGIASGKIYNIGNPVNNYSIRDLAGMMLNLAAEYPEYA 281
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
E A V+ +S +YG GY D R+P +T ++LGW P T++ D L +
Sbjct: 282 EGAKHVKIVETTSGAYYGAGYQDVQNRVPKITNTCEELGWAPSTTMADSLRNIFDAYRSQ 341
Query: 375 YAEA 378
A+A
Sbjct: 342 VAQA 345
>gi|422974453|ref|ZP_16976363.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
TA124]
gi|371595832|gb|EHN84679.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
TA124]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPANEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|398882715|ref|ZP_10637681.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM60]
gi|398198382|gb|EJM85340.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM60]
Length = 663
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 HFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSTSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRDNFPPFAGFRDVESKAFYGTGYQDVSHRKPSIDNAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWAPTVQMSETIGNTLDF 650
>gi|395795632|ref|ZP_10474936.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas sp. Ag1]
gi|395340260|gb|EJF72097.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas sp. Ag1]
Length = 663
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + ++I LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEIYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNDNCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRSNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIDNAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPTVEMSETIGNTLDF 650
>gi|293410618|ref|ZP_06654194.1| polymyxin resistance protein ArnA_DH [Escherichia coli B354]
gi|291471086|gb|EFF13570.1| polymyxin resistance protein ArnA_DH [Escherichia coli B354]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPANEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|291532416|emb|CBL05529.1| Nucleoside-diphosphate-sugar epimerases [Megamonas hypermegale
ART12/1]
Length = 343
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 200/369 (54%), Gaps = 30/369 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ I + G GFIGSH E L +T +I D+ ++ I L+ R + +I
Sbjct: 1 MKIFVTGVNGFIGSHFLEMALAQTDWEIQGFDLADNNITQFLDNP------RFSMKKGDI 54
Query: 78 -KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
K ++ L IK D+ + L I PA Y TRPL T +F L +V+ C+E KR+I
Sbjct: 55 FKEEAWLNEQIKECDVLLPLIGIARPAYYITRPLWTFELDFEQNLKMVRKCAEYGKRVIF 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG +P DP V+ ED S I G + K RW Y+C+KQ+++R+I
Sbjct: 115 PSTSEVYG------MP-------DPNNKVMDEDNSNLILGPVSKSRWIYSCSKQMMDRVI 161
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G E GL+FT+ RPFNW+GPR+D SE R + F ++L + LV+GG
Sbjct: 162 FAFGQEMGLKFTLFRPFNWVGPRLD---SFKDASEHKGRSITQFIYDVLYTGKITLVNGG 218
Query: 257 QSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS-- 313
+R+F ++ D ++ ++ +I N +A G IFN+GNP N +++++AE++ + K
Sbjct: 219 AQRRSFTWVGDGVQGLIDIITNKDNQAEGQIFNIGNPENNYSIKEMAEIVVDEMKKFPEF 278
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
+ A + + + S ++YG+ YDD R+P + + +LGW K +L + + TL +
Sbjct: 279 KDKADKVEFIVMDSDKYYGKNYDDMQDRLPSVKKMETRLGWKSKATLREAIHYTLEW--- 335
Query: 374 TYAEAIKQA 382
YA+ + +A
Sbjct: 336 -YAKNLDKA 343
>gi|423140917|ref|ZP_17128555.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
gi|379053471|gb|EHY71362.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. houtenae
str. ATCC BAA-1581]
Length = 660
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 200/380 (52%), Gaps = 32/380 (8%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLL 59
+AGA + + + + ++G GFIG+HL E++L E + + +D+ ++ I + LL
Sbjct: 299 VAGARLNRPSAASGKRRIRVLILGVNGFIGNHLTERLLNEENYDVYGMDIDSNAISRFLL 358
Query: 60 EPESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFI 118
P R F +I H +E +K D+ + L AI TP +Y PL +F
Sbjct: 359 HP-------RFHFVEGDISIHSEWIEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFE 411
Query: 119 DALPVVKYCSENNKRLIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
+ L +++YC + KR++ ST EVYG T SF ED S I G
Sbjct: 412 ENLRIIRYCVKYRKRVVFPSTSEVYGMCTDASF----------------DEDKSNLIVGP 455
Query: 178 IEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVL 237
+ K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R +
Sbjct: 456 VNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAI 512
Query: 238 ACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEV 296
NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE
Sbjct: 513 TQLILNLVEGSPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEA 572
Query: 297 TVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
++ +LA ++ + + K + G V S+ +YG+GY D R P++ + L W
Sbjct: 573 SIEELATLLLDSFDKHPLRGHFPPFAGFQIVESRSYYGKGYQDVAHRKPNIDNARRCLDW 632
Query: 355 NPKTSLWDLLESTLTYQHRT 374
P ++ D +E TL + R+
Sbjct: 633 EPSIAMRDTVEETLDFFLRS 652
>gi|157374063|ref|YP_001472663.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shewanella sediminis HAW-EB3]
gi|254806289|sp|A8FRR2.1|ARNA_SHESH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|157316437|gb|ABV35535.1| bifunctional polymyxin resistance ArnA protein (polymyxin
resistanceprotein PmrI) [Shewanella sediminis HAW-EB3]
Length = 660
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/373 (33%), Positives = 197/373 (52%), Gaps = 44/373 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIK 78
+ ++GA GFIG+HL +++L + ++I A+D+ + +I +HL P+ I H
Sbjct: 320 VLIMGANGFIGNHLTKRLLDDGKYEIYAMDMSSSQIEQHLSHPDFHFVEGDITIH----- 374
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E IK D+ + L AI TP +Y PL +F + L +V+ C + +KR+I S
Sbjct: 375 -NEWIEYHIKKCDIVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRACVKYDKRIIFPS 433
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED SP I G I +QRW Y+ +KQL++R+I+A
Sbjct: 434 TSEVYG------------MCTDEEF---DEDTSPLITGPINRQRWIYSTSKQLLDRVIWA 478
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G ++ L+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 479 YGKKDNLKFTLFRPFNWMGPRLD---SLNSARVGSSRAITQLILNLVEGTPIKLIDGGEQ 535
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I +AIEA+ +IEN +G I N+G+P NE +++ +AE + E +
Sbjct: 536 KRCFTDISEAIEALFRVIENKDGLCDGQIINIGSPDNEASIKVMAETLVEKFE------- 588
Query: 318 LEEPTVD----------VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
E P D V S+ FYG+GY D R P + + L W P + +E T
Sbjct: 589 -EHPLRDQFPPFAGYNLVESQSFYGDGYQDVQHRRPSIKNAKKLLNWEPTIMMDQTIEDT 647
Query: 368 LTYQHRTYAEAIK 380
L + +T E K
Sbjct: 648 LDFFLKTAVEETK 660
>gi|420381116|ref|ZP_14880569.1| bifunctional polymyxin resistance protein ArnA [Shigella
dysenteriae 225-75]
gi|391300602|gb|EIQ58514.1| bifunctional polymyxin resistance protein ArnA [Shigella
dysenteriae 225-75]
Length = 441
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 99 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 150
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 151 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 210
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 211 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 255
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 256 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 312
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE + +L EM+ + K
Sbjct: 313 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEARIEELGEMLLASFEKHPLR 372
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 373 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 431
Query: 373 RT 374
RT
Sbjct: 432 RT 433
>gi|398876864|ref|ZP_10632015.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM67]
gi|398203657|gb|EJM90475.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM67]
Length = 663
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 195/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 HFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDAKF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSTSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRDNFPPFAGFRDVESKAFYGTGYQDVSHRKPSIDNAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + +TL +
Sbjct: 632 LDWAPNVQMSKTIGNTLDF 650
>gi|447916740|ref|YP_007397308.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas poae RE*1-1-14]
gi|445200603|gb|AGE25812.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas poae RE*1-1-14]
Length = 667
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 199/391 (50%), Gaps = 43/391 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R G + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGSKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNGVCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDVESKAFYGNGYQDVAHRKPSIDNAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTYQHRTYAEAIKQA 382
L W P + + + +TL + R I Q+
Sbjct: 632 LNWTPTVEMSETIGNTLDFFLREAMLEIAQS 662
>gi|312171676|emb|CBX79934.1| Bifunctional polymyxin resistance protein arnA [Erwinia amylovora
ATCC BAA-2158]
Length = 660
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 186/355 (52%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++LL+ + LD+ +D I + G +R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLLDDNFDVYGLDIGSDAISRFI------GHERFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H ++ IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIKYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDA---------------TFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG
Sbjct: 477 YGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVDGGGQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GN NE ++RQLAE + + + +
Sbjct: 534 KRCFTDIHDGIEALFRIIENRQHNCDGQIINIGNADNEASIRQLAEQLLASFERHPLRNR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+V S +YG+GY D + R P ++ + L W PK ++ ++ TL +
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSISNAKRLLNWQPKVTMDKTIDDTLDF 648
>gi|440736889|ref|ZP_20916472.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fluorescens BRIP34879]
gi|440382650|gb|ELQ19144.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas fluorescens BRIP34879]
Length = 667
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/391 (33%), Positives = 199/391 (50%), Gaps = 43/391 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R G + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGSKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNGVCNGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + G DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRGNFPPFAGFRDVESKAFYGNGYQDVAHRKPSIDNAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTYQHRTYAEAIKQA 382
L W P + + + +TL + R I Q+
Sbjct: 632 LNWTPTVEMSETIGNTLDFFLREAMLEIAQS 662
>gi|422370163|ref|ZP_16450557.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 16-3]
gi|315298086|gb|EFU57355.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli MS 16-3]
Length = 660
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GF+G+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 318 VLILGVNGFVGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSEWIE 377
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 378 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 424
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 425 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 469
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 470 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 526
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 586
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + + L W PK + + ++ T
Sbjct: 587 KHPLRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDET 645
Query: 368 LTYQHRT 374
L + RT
Sbjct: 646 LDFFLRT 652
>gi|292487571|ref|YP_003530443.1| bifunctional polymyxin resistance protein arnA [Erwinia amylovora
CFBP1430]
gi|292898811|ref|YP_003538180.1| bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy
l-arabinose formyltransferase [Erwinia amylovora ATCC
49946]
gi|428784504|ref|ZP_19001995.1| Bifunctional polymyxin resistance protein arnA [Erwinia amylovora
ACW56400]
gi|291198659|emb|CBJ45767.1| bifunctional polymyxin resistance protein [includes: UDP-glucuronic
acid decarboxylase; UDP-4-amino-4-deoxy l-arabinose
formyltransferase] [Erwinia amylovora ATCC 49946]
gi|291552990|emb|CBA20035.1| Bifunctional polymyxin resistance protein arnA [Erwinia amylovora
CFBP1430]
gi|426276066|gb|EKV53793.1| Bifunctional polymyxin resistance protein arnA [Erwinia amylovora
ACW56400]
Length = 660
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 186/355 (52%), Gaps = 28/355 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++LL+ + LD+ +D I + G +R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLLDDNFDVYGLDIGSDAISRFI------GHERFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H ++ IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIKYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED+S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDA---------------TFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG
Sbjct: 477 YGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLVDGGGQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I D IEA+ +IEN +G I N+GN NE ++RQLAE + + + +
Sbjct: 534 KRCFTDIHDGIEALFRIIENRQHNCDGQIINIGNADNEASIRQLAEQLLASFERHPLRNR 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+V S +YG+GY D + R P ++ + L W PK ++ ++ TL +
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSISNAKRLLNWQPKVTMDKTIDDTLDF 648
>gi|209519531|ref|ZP_03268324.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160]
gi|209500010|gb|EEA00073.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. H160]
Length = 348
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 192/364 (52%), Gaps = 31/364 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLVNHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E IK D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHIKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPEESQLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A G I+N+GNP N +VR+LA M + A+
Sbjct: 218 QKRAFTDIDDGISALMKIIENKNGVATGKIYNIGNPTNNFSVRELAHKMLALAAEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
++A + V+ SS +YG GY D R+P + Q+LGW P ++ + L
Sbjct: 278 DSAKQVQLVETSSGAYYGNGYQDVQNRVPKIDNTKQELGWAPTSTFDEALRKIFEAYRGH 337
Query: 375 YAEA 378
AEA
Sbjct: 338 VAEA 341
>gi|416506933|ref|ZP_11735075.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|416514054|ref|ZP_11738129.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|416557112|ref|ZP_11759294.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
gi|363554476|gb|EHL38712.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB31]
gi|363566475|gb|EHL50490.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. ATCC BAA710]
gi|363579053|gb|EHL62851.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 42N]
Length = 660
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 198/372 (53%), Gaps = 46/372 (12%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 ---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD 362
+G A+E S+ +YG+GY D R P + + L W P ++ D
Sbjct: 588 HPLRCHFPPFAGFQAVE-------SRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRD 640
Query: 363 LLESTLTYQHRT 374
+E TL + R+
Sbjct: 641 TVEETLDFFLRS 652
>gi|187731066|ref|YP_001881078.1| bifunctional polymyxin resistance arnA protein [Shigella boydii CDC
3083-94]
gi|254806290|sp|B2TW38.1|ARNA_SHIB3 RecName: Full=Putative bifunctional polymyxin resistance protein
ArnA; Includes: RecName:
Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase;
AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N
formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|187428058|gb|ACD07332.1| bifunctional polymyxin resistance arnA protein [Shigella boydii CDC
3083-94]
Length = 526
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 189/362 (52%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 184 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 235
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 236 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 295
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 296 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 340
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 341 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 397
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L +M+ + K
Sbjct: 398 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGKMLLASFEKHPLR 457
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 458 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 516
Query: 373 RT 374
RT
Sbjct: 517 RT 518
>gi|417384445|ref|ZP_12149815.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|417532482|ref|ZP_12186843.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
gi|353608836|gb|EHC62309.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|353662626|gb|EHD01565.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Urbana str. R8-2977]
Length = 660
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 198/372 (53%), Gaps = 46/372 (12%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 ---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD 362
+G A+E S+ +YG+GY D R P + + L W P ++ D
Sbjct: 588 HPLRCHFPPFAGFQAVE-------SRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRD 640
Query: 363 LLESTLTYQHRT 374
+E TL + R+
Sbjct: 641 TVEETLDFFLRS 652
>gi|423197943|ref|ZP_17184526.1| bifunctional polymyxin resistance protein ARNA [Aeromonas
hydrophila SSU]
gi|404630754|gb|EKB27404.1| bifunctional polymyxin resistance protein ARNA [Aeromonas
hydrophila SSU]
Length = 663
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 194/365 (53%), Gaps = 34/365 (9%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF 72
R + + ++G GFIG+HL E++L + +++ LD+ + + + G F
Sbjct: 313 RKARLTRVLILGVNGFIGNHLTERLLQDGGYEVYGLDIGSSAVDRFI------GHPNFHF 366
Query: 73 HRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+I H +E IK D+ + L AI TP +Y PL +F + L +V+YC + +
Sbjct: 367 VEGDISIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYH 426
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + D ++ ED+S I G I KQRW Y+ +KQL
Sbjct: 427 KRIIFPSTSEVYG------------MCDDHSF---DEDSSRLIVGPINKQRWIYSVSKQL 471
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL FT+ RPFNW+GPR+D +D G R + NL+ P++
Sbjct: 472 LDRVIWAYGKKEGLNFTLFRPFNWMGPRLD---SLDSARIGSSRAITQLILNLVDGTPIQ 528
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
LVDGG +R F I+D IEA+ +IEN R +G I N+GNP NE +++Q+AE++ A
Sbjct: 529 LVDGGAQKRCFTDIEDGIEALFRIIENKENRCDGQIINIGNPDNEASIQQMAEILL---A 585
Query: 311 KVSGEAALEE--PTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
K ++ P V SK FYG+GY D R P + + L W P + + +
Sbjct: 586 KFEAHPLRDQFPPFAGFKLVESKSFYGDGYQDVSHRRPSIANARRLLDWEPTIEMEETIG 645
Query: 366 STLTY 370
+TL +
Sbjct: 646 NTLDF 650
>gi|423706291|ref|ZP_17680674.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
B799]
gi|385712175|gb|EIG49130.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
B799]
Length = 660
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L I TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVVIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|350545284|ref|ZP_08914778.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Candidatus Burkholderia kirkii UZHbot1]
gi|350526931|emb|CCD39213.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase [Candidatus Burkholderia kirkii UZHbot1]
Length = 346
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 191/354 (53%), Gaps = 31/354 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ D++ L E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLANHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPENSTLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL+FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGIE-GLDFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A+G I+N+GNP N +VR+LA M + +
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKGGVASGKIYNIGNPQNNFSVRELANKMLALANEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
++A V+ SS +YG GY D R+P + Q+LGW P++++ D L +
Sbjct: 278 DSAKNVQLVETSSGAYYGAGYQDVQNRVPKIDNTMQELGWAPQSTMDDALRKSF 331
>gi|307729550|ref|YP_003906774.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003]
gi|307584085|gb|ADN57483.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003]
Length = 348
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 193/364 (53%), Gaps = 31/364 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLINHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHIRKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPEESQLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A G I+N+GNP N +VR+LA M + A+
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKNGVATGKIYNIGNPTNNFSVRELAHKMLALAAEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
++A + V+ SS +YG GY D R+P + Q+LGW PK++ + L
Sbjct: 278 DSAKQVQLVETSSGAYYGAGYQDVQNRVPKIDNTMQELGWAPKSTFDEALRKIFEAYRGH 337
Query: 375 YAEA 378
AEA
Sbjct: 338 VAEA 341
>gi|117617804|ref|YP_855536.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|134035390|sp|A0KGY6.1|ARNA_AERHH RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|117559211|gb|ABK36159.1| bifunctional polymyxin resistance ArnA protein (Polymyxin
resistanceprotein pmrI) [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 663
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 192/370 (51%), Gaps = 44/370 (11%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF 72
R + + ++G GFIG+HL E++L + +++ LD+ + + + G F
Sbjct: 313 RKARLTRVLILGVNGFIGNHLTERLLQDGGYEVYGLDIGSSAVDRFI------GHPNFHF 366
Query: 73 HRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+I H +E IK D+ + L AI TP +Y PL +F + L +V+YC + +
Sbjct: 367 VEGDISIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYH 426
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + D ++ ED+S I G I KQRW Y+ +KQL
Sbjct: 427 KRIIFPSTSEVYG------------MCDDHSF---DEDSSRLIVGPINKQRWIYSVSKQL 471
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL FT+ RPFNW+GPR+D +D G R + NL+ P++
Sbjct: 472 LDRVIWAYGKKEGLNFTLFRPFNWMGPRLD---SLDSARIGSSRAITQLILNLVDGTPIQ 528
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
LVDGG +R F I+D IEA+ +IEN R +G I N+GNP NE +++Q+AE++ +
Sbjct: 529 LVDGGAQKRCFTDIEDGIEALFRIIENKENRCDGQIINIGNPDNEASIQQMAEILLAKFE 588
Query: 311 KVSGEAALEEPTVD----------VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
P D V SK FYG+GY D R P + + L W P +
Sbjct: 589 A--------HPLRDHFPPFAGFKLVESKSFYGDGYQDVSHRRPSIANARRLLDWEPTIEM 640
Query: 361 WDLLESTLTY 370
+ + +TL +
Sbjct: 641 EETIGNTLDF 650
>gi|372276772|ref|ZP_09512808.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pantoea sp. SL1_M5]
Length = 659
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 192/360 (53%), Gaps = 30/360 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDEHFEVYGLDISSDAISRFLD------HPRFHFVEGDIAI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPS 431
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T SF ED S + G I KQRW Y+ +KQL++R+I+
Sbjct: 432 TSEVYGMCTDASF----------------DEDCSNLVVGPINKQRWIYSVSKQLLDRVIW 475
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 476 AYGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGK 532
Query: 258 SQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSG 314
+R F I+D +EA+ +IEN +G I N+GNP NE ++++LAE + + + +
Sbjct: 533 QKRCFTDIQDGVEALFRIIENKQLNCDGQIINIGNPDNEASIKELAEQLLASFERHPLRS 592
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+ +V S +YG+GY D + R P + + LGW P ++ +++TL + RT
Sbjct: 593 QFPPFAGFREVESSSYYGKGYQDVEHRKPAIRNARRLLGWTPTVTMDVTIDNTLDFFLRT 652
>gi|37526549|ref|NP_929893.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|81572496|sp|Q7N3Q7.1|ARNA_PHOLL RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|36785980|emb|CAE15032.1| PbgP3 protein [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 660
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 191/368 (51%), Gaps = 32/368 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + I +D+ + I+ + R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLRDGNYDIYGMDIGSSAIERFI------SNPRFHFIEGDINI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +V+YC + NKR+I S
Sbjct: 372 HTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D + ED S I G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------------MCDDKEF---DEDDSRLIVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+
Sbjct: 477 YGEKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQ 533
Query: 259 QRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++RQLAE++ + + E
Sbjct: 534 KRCFTDINDGIEALFRIIENREGLCDGQIINIGNPTNEASIRQLAEILLDSFE--DHELR 591
Query: 318 LEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P V S +YG+GY D + R P + + L W P + + TL + R
Sbjct: 592 DHFPPFAGFKKVESGSYYGKGYQDVEHRKPSIKNAERLLDWKPTIDMKQTINETLDFFLR 651
Query: 374 TYAEAIKQ 381
E + +
Sbjct: 652 GAVEELGK 659
>gi|387888731|ref|YP_006319029.1| putative bifunctional polymyxin resistance ArnA protein
[Escherichia blattae DSM 4481]
gi|414592796|ref|ZP_11442445.1| bifunctional polymyxin resistance protein ArnA [Escherichia blattae
NBRC 105725]
gi|386923564|gb|AFJ46518.1| putative bifunctional polymyxin resistance ArnA protein
[Escherichia blattae DSM 4481]
gi|403196277|dbj|GAB80097.1| bifunctional polymyxin resistance protein ArnA [Escherichia blattae
NBRC 105725]
Length = 660
Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 188/364 (51%), Gaps = 38/364 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++I LD+ D I L G R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNYEIYGLDIGTDAIGRFL------GNPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPS 431
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T G F ED S + G I KQRW Y+ +KQL++R+I+
Sbjct: 432 TSEVYGMCTDGQF----------------DEDTSNLVVGPISKQRWIYSVSKQLLDRVIW 475
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + GL FT+ RPFNW+GPR+D +D G R + NL+ P+KL++GG
Sbjct: 476 AYGDKAGLRFTLFRPFNWMGPRLD---SLDAARIGSSRAITQLILNLVEGTPVKLIEGGS 532
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVY------A 310
+R F I D IEA+ +IEN + +G I N+GNP NE ++++LAEM+ +
Sbjct: 533 QKRCFTDISDGIEALFRIIENKDGQCDGQIINIGNPDNEASIKELAEMLLACFERHPLRQ 592
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ A E V S +YG+GY D + R P + + L W+P + + TL +
Sbjct: 593 RFPPFAGFRE----VESSNYYGKGYQDVEHRKPSIRNARRLLNWSPGVPMDQTVAQTLDF 648
Query: 371 QHRT 374
R+
Sbjct: 649 FLRS 652
>gi|205353414|ref|YP_002227215.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375124255|ref|ZP_09769419.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|445128878|ref|ZP_21380489.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|226723723|sp|B5RCC4.1|ARNA_SALG2 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|205273195|emb|CAR38158.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|326628505|gb|EGE34848.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|444854533|gb|ELX79594.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 660
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 196/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + +L+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILSLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + LGW P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|416286506|ref|ZP_11648405.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella boydii ATCC 9905]
gi|320178771|gb|EFW53734.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella boydii ATCC 9905]
Length = 660
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 187/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E +L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTECLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|424939638|ref|ZP_18355401.1| putative transformylase [Pseudomonas aeruginosa NCMG1179]
gi|346056084|dbj|GAA15967.1| putative transformylase [Pseudomonas aeruginosa NCMG1179]
Length = 662
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGAASG-PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R NG I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCNGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPTIELRETIGKTLDF 649
>gi|390436973|ref|ZP_10225511.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pantoea agglomerans IG1]
Length = 659
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 192/360 (53%), Gaps = 30/360 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDEHFEVYGLDISSDAISRFLD------HPRFHFVEGDIAI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPS 431
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T SF ED S + G I KQRW Y+ +KQL++R+I+
Sbjct: 432 TSEVYGMCTDASF----------------DEDCSNLVVGPINKQRWIYSISKQLLDRVIW 475
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 476 AYGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGK 532
Query: 258 SQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSG 314
+R F I+D +EA+ +IEN +G I N+GNP NE ++++LAE + + + +
Sbjct: 533 QKRCFTDIQDGVEALFRIIENKQLNCDGQIINIGNPDNEASIKELAEQLLASFERHPLRS 592
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+ +V S +YG+GY D + R P + + LGW P ++ +++TL + RT
Sbjct: 593 QFPPFAGFREVESSSYYGKGYQDVEHRKPAIRNARRLLGWTPTVTMDVTIDNTLDFFLRT 652
>gi|170692304|ref|ZP_02883467.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M]
gi|170142734|gb|EDT10899.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M]
Length = 348
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 192/364 (52%), Gaps = 31/364 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLINHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPEESQLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +I+N A G I+N+GNP N +VR+LA M + A+
Sbjct: 218 QKRAFTDIDDGIGALMKIIDNKNGVATGKIYNIGNPTNNFSVRELAHKMLTLAAEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
E A + V+ SS +YG GY D R+P + Q+LGW PK++ + L
Sbjct: 278 ETAKKVQLVETSSGAYYGAGYQDVQNRVPKIDNTMQELGWAPKSTFDEALRKIFEAYRGH 337
Query: 375 YAEA 378
AEA
Sbjct: 338 VAEA 341
>gi|413962744|ref|ZP_11401971.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
sp. SJ98]
gi|413928576|gb|EKS67864.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
sp. SJ98]
Length = 348
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 131/366 (35%), Positives = 192/366 (52%), Gaps = 31/366 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ D++ L E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLANHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPENSVLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A+G I+N+GNP N +VR+LA M + +
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKGGVASGKIYNIGNPTNNFSVRELANKMLALANEFPEYS 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
++A + V+ SS +YG GY D R+P + Q+LGW P+ S+ D L
Sbjct: 278 DSAKQVQLVETSSGAYYGNGYQDVQNRVPKIDNTMQELGWAPQASMDDALRKIFEAYRGH 337
Query: 375 YAEAIK 380
EA K
Sbjct: 338 VGEARK 343
>gi|432617358|ref|ZP_19853472.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE75]
gi|431153778|gb|ELE54673.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE75]
Length = 660
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 187/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLTVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|323526178|ref|YP_004228331.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001]
gi|407713496|ref|YP_006834061.1| NAD-dependent epimerase/dehydratase [Burkholderia phenoliruptrix
BR3459a]
gi|323383180|gb|ADX55271.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001]
gi|407235680|gb|AFT85879.1| NAD-dependent epimerase/dehydratase [Burkholderia phenoliruptrix
BR3459a]
Length = 348
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 193/364 (53%), Gaps = 31/364 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLVNHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E I+ D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHIRKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPEESQLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A G I+N+GNP N +VR+LA M + A+
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKNGVATGKIYNIGNPTNNFSVRELAHKMLALAAEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
++A + V+ SS +YG GY D R+P + Q+LGW PK++ + L
Sbjct: 278 DSAKKVQLVETSSGAYYGTGYQDVQNRVPKIDNTMQELGWAPKSTFDEALRKIFEAYRGH 337
Query: 375 YAEA 378
AEA
Sbjct: 338 VAEA 341
>gi|295676434|ref|YP_003604958.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002]
gi|295436277|gb|ADG15447.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002]
Length = 348
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 192/364 (52%), Gaps = 31/364 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLVNHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E IK D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHIKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPEESQLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A G I+N+GNP N +VR+LA M + A+
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKNGVATGKIYNIGNPTNNFSVRELAHKMLALAAEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
++A + V+ SS +YG GY D R+P + Q+LGW P ++ + L
Sbjct: 278 DSAKKVQLVETSSGAYYGNGYQDVQNRVPKIDNTKQELGWAPTSTFDEALRKIFEAYRGH 337
Query: 375 YAEA 378
AEA
Sbjct: 338 VAEA 341
>gi|302877913|ref|YP_003846477.1| NAD-dependent epimerase/dehydratase [Gallionella capsiferriformans
ES-2]
gi|302580702|gb|ADL54713.1| NAD-dependent epimerase/dehydratase [Gallionella capsiferriformans
ES-2]
Length = 346
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 196/365 (53%), Gaps = 29/365 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL KIL T ++ +D+ +++I L+ G +R F +I
Sbjct: 4 VLILGVNGFIGHHLSNKILATTDWEVYGMDMSSERIADLI------GHERFHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPSTYVKQPLRVFELDFEANLPIVRAAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + D DPA S I G I K RW Y+C+KQL++R+I+
Sbjct: 118 TSEVYG------MCHDEEF--DPA-------ESELICGPINKPRWIYSCSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGGQ
Sbjct: 163 YGME-GLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFLGHIVRGENISLVDGGQQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG--E 315
+R F Y+ D I A++ +IEN A G I+N+GNP N +++ LA+MM ++ + E
Sbjct: 219 KRAFTYVDDGINALMKIIENKDGVATGKIYNIGNPVNNFSIKDLADMMLKLANEYPEYRE 278
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+A + ++ ++ +YG+GY D R+P +T ++LGW P ++ D L +
Sbjct: 279 SAQKVKILETTAAAYYGKGYQDVQNRVPKITNTCEELGWAPVINMADTLRNIFDAYRGQV 338
Query: 376 AEAIK 380
EA K
Sbjct: 339 GEARK 343
>gi|420348150|ref|ZP_14849539.1| bifunctional polymyxin resistance protein ArnA [Shigella boydii
965-58]
gi|391269153|gb|EIQ28065.1| bifunctional polymyxin resistance protein ArnA [Shigella boydii
965-58]
Length = 660
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/362 (33%), Positives = 187/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E +L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTECLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|420364114|ref|ZP_14864997.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella sonnei 4822-66]
gi|391293777|gb|EIQ52036.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella sonnei 4822-66]
Length = 660
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 187/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ T +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETQDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|71042199|pdb|1Z7B|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase
(Decarboxylase) Domain, R619e Mutant
Length = 358
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 16 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 67
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 68 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 127
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 128 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 172
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 173 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 229
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 230 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 289
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + P + ++ L W PK + + ++ TL +
Sbjct: 290 HHF-PPFAGFRVVESSSYYGKGYQDVEHEKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 348
Query: 373 RT 374
RT
Sbjct: 349 RT 350
>gi|331683931|ref|ZP_08384527.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H299]
gi|450190819|ref|ZP_21890980.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SEPT362]
gi|331078883|gb|EGI50085.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli H299]
gi|449320127|gb|EMD10164.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli SEPT362]
Length = 660
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 187/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCNDKYF---------------DEDHSNLTVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|168261684|ref|ZP_02683657.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
gi|205349416|gb|EDZ36047.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Hadar str. RI_05P066]
Length = 660
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLNWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|385209782|ref|ZP_10036650.1| nucleoside-diphosphate-sugar epimerase [Burkholderia sp. Ch1-1]
gi|385182120|gb|EIF31396.1| nucleoside-diphosphate-sugar epimerase [Burkholderia sp. Ch1-1]
Length = 348
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 187/346 (54%), Gaps = 31/346 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLINHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPEESQLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A G I+N+GNP N +VR+LA M + A+
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKDGVATGKIYNIGNPTNNFSVRELAHKMLTLAAEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
+ A + V+ SS +YG GY D R+P + Q+LGW PK++
Sbjct: 278 DTAKQVQLVETSSGAYYGAGYQDVQNRVPKIDNTMQELGWAPKSTF 323
>gi|168237317|ref|ZP_02662375.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|194736015|ref|YP_002115369.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|416421261|ref|ZP_11689374.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|416434699|ref|ZP_11697823.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|416437849|ref|ZP_11699058.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|416442746|ref|ZP_11702507.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|416449963|ref|ZP_11707107.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|416456115|ref|ZP_11711179.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|416470415|ref|ZP_11718853.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|416478742|ref|ZP_11721860.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|416486108|ref|ZP_11724988.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|416497001|ref|ZP_11729434.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|416530319|ref|ZP_11744885.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|416532929|ref|ZP_11745938.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|416544084|ref|ZP_11752653.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|416554307|ref|ZP_11758215.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|416567002|ref|ZP_11764129.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|416575178|ref|ZP_11768270.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|416582598|ref|ZP_11772797.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|416590243|ref|ZP_11777638.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|416596843|ref|ZP_11781658.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|416604045|ref|ZP_11785906.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|416610989|ref|ZP_11790482.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|416622100|ref|ZP_11796776.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|416630572|ref|ZP_11800821.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|416649319|ref|ZP_11809792.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|416665216|ref|ZP_11816541.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|416674099|ref|ZP_11821167.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|416690245|ref|ZP_11825787.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|416703574|ref|ZP_11829670.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|416711726|ref|ZP_11835506.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|416715702|ref|ZP_11838341.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|416722453|ref|ZP_11843385.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|416727629|ref|ZP_11847176.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|416740614|ref|ZP_11854537.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|416751295|ref|ZP_11860057.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|416754065|ref|ZP_11861089.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|416760646|ref|ZP_11864934.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|416769311|ref|ZP_11871001.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|417359623|ref|ZP_12133950.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|417468082|ref|ZP_12165202.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|418483304|ref|ZP_13052314.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|418497082|ref|ZP_13063503.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|418501759|ref|ZP_13068138.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|418506153|ref|ZP_13072491.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|418507757|ref|ZP_13074066.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|418511623|ref|ZP_13077874.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|418526262|ref|ZP_13092240.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
gi|226723727|sp|B4TPI2.1|ARNA_SALSV RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|194711517|gb|ACF90738.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|197289624|gb|EDY28987.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|322617046|gb|EFY13952.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617648|gb|EFY14547.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322624722|gb|EFY21551.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322630271|gb|EFY27041.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634452|gb|EFY31185.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322639162|gb|EFY35854.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640025|gb|EFY36692.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645754|gb|EFY42278.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651529|gb|EFY47904.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656089|gb|EFY52388.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659442|gb|EFY55689.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665903|gb|EFY62086.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669858|gb|EFY65999.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322673844|gb|EFY69941.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678602|gb|EFY74658.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683602|gb|EFY79616.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322687678|gb|EFY83648.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193488|gb|EFZ78693.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323198393|gb|EFZ83495.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323218272|gb|EGA02982.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222971|gb|EGA07320.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227406|gb|EGA11571.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323232267|gb|EGA16370.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235700|gb|EGA19784.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323241140|gb|EGA25176.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244882|gb|EGA28884.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323250001|gb|EGA33895.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323251613|gb|EGA35481.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323254924|gb|EGA38715.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263060|gb|EGA46606.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268120|gb|EGA51597.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323270787|gb|EGA54225.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|353588968|gb|EHC47869.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Give str. S5-487]
gi|353629394|gb|EHC77216.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Montevideo str. S5-403]
gi|363551064|gb|EHL35385.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. LQC 10]
gi|363561592|gb|EHL45708.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 29N]
gi|363568882|gb|EHL52848.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. SARB30]
gi|363579352|gb|EHL63143.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 4441 H]
gi|366054886|gb|EHN19229.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035318]
gi|366061884|gb|EHN26128.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 80959-06]
gi|366065830|gb|EHN30016.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035320]
gi|366066226|gb|EHN30401.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035321]
gi|366080525|gb|EHN44494.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. CT_02035327]
gi|366084473|gb|EHN48381.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Pomona str. ATCC 10729]
gi|366829075|gb|EHN55954.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|372205818|gb|EHP19324.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008286]
Length = 660
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|417327595|ref|ZP_12112972.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
gi|353570208|gb|EHC34541.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Adelaide str. A4-669]
Length = 660
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|366158383|ref|ZP_09458245.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia sp. TW09308]
gi|432372933|ref|ZP_19615972.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE11]
gi|430895355|gb|ELC17618.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE11]
Length = 658
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 193/376 (51%), Gaps = 38/376 (10%)
Query: 10 LDGRPI----KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
L+ +P+ + + ++G GFIG+HL E++L E +++ LD+ +D I L
Sbjct: 304 LNSQPVCTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------ 357
Query: 66 GADRIQFHRLNIK---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
+ FH + H +E +K D+ + L AI TP +Y PL +F + L
Sbjct: 358 --NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLR 415
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+++YC + KR+I ST EVYG + ED S I G + K R
Sbjct: 416 IIRYCVKYRKRIIFPSTSEVYGMCNDKYF---------------DEDHSNLIVGPVNKPR 460
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
W Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R +
Sbjct: 461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLIL 517
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQL 301
NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L
Sbjct: 518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALFRIIENTGNRCDGEIINIGNPDNEASIEEL 577
Query: 302 AEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
+M+ + K P V S +YG+GY D R P + + L W PK
Sbjct: 578 GQMLLASFEKHPLRHHF-PPFAGFRIVESSSYYGKGYQDVAHRKPGIRNARRCLDWEPKI 636
Query: 359 SLWDLLESTLTYQHRT 374
+ + ++ TL + RT
Sbjct: 637 DMQETIDETLDFFLRT 652
>gi|417476529|ref|ZP_12171018.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353640575|gb|EHC85534.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
Length = 660
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|213621840|ref|ZP_03374623.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 522
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 176 RRIRVLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 228
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 229 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 288
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 289 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 332
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 333 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 389
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 390 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 449
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 450 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETL 508
Query: 369 TYQHRT 374
+ R+
Sbjct: 509 DFFLRS 514
>gi|29141079|ref|NP_804421.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|29136705|gb|AAO68270.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
Length = 660
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|416643814|ref|ZP_11806239.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323201906|gb|EFZ86968.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
Length = 648
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 302 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 354
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 355 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 414
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 415 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 458
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 459 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 515
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 516 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 575
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 576 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETL 634
Query: 369 TYQHRT 374
+ R+
Sbjct: 635 DFFLRS 640
>gi|71042198|pdb|1Z75|A Chain A, Crystal Structure Of Arna Dehydrogenase (decarboxylase)
Domain, R619m Mutant
Length = 358
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 16 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 75
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 76 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 122
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 123 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 167
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 168 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 224
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 225 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 284
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + P + ++ L W PK + + ++ T
Sbjct: 285 KHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHMKPSIRNAHRCLDWEPKIDMQETIDET 343
Query: 368 LTYQHRT 374
L + RT
Sbjct: 344 LDFFLRT 350
>gi|16761225|ref|NP_456842.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|56412803|ref|YP_149878.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197361737|ref|YP_002141373.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|213053538|ref|ZP_03346416.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213417697|ref|ZP_03350821.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213427757|ref|ZP_03360507.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213581703|ref|ZP_03363529.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213648589|ref|ZP_03378642.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213858059|ref|ZP_03385030.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289829670|ref|ZP_06547211.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|378958712|ref|YP_005216198.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|417420696|ref|ZP_12160025.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|21542318|sp|Q8Z540.1|ARNA_SALTI RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|81599859|sp|Q5PNA6.1|ARNA_SALPA RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|226723726|sp|B5BCP6.1|ARNA_SALPK RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|25511861|pir||AB0794 probable lipopolysaccharide modification protein STY2529 [imported]
- Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16503524|emb|CAD07532.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Typhi]
gi|56127060|gb|AAV76566.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|197093213|emb|CAR58657.1| putative lipopolysaccharide modification protein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|353619221|gb|EHC69682.1| Polymyxin resistance protein ArnA [Salmonella enterica subsp.
enterica serovar Mississippi str. A4-633]
gi|374352584|gb|AEZ44345.1| UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid
decarboxylating [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
Length = 660
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLDEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|71042197|pdb|1Z74|A Chain A, Crystal Structure Of E.Coli Arna Dehydrogenase
(Decarboxylase) Domain, R619y Mutant
Length = 358
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 16 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 75
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 76 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 122
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 123 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 167
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 168 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 224
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 225 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 284
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + P + ++ L W PK + + ++ T
Sbjct: 285 KHPLRHHF-PPFAGFRVVESSSYYGKGYQDVEHYKPSIRNAHRCLDWEPKIDMQETIDET 343
Query: 368 LTYQHRT 374
L + RT
Sbjct: 344 LDFFLRT 350
>gi|168229666|ref|ZP_02654724.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|194469993|ref|ZP_03075977.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|194456357|gb|EDX45196.1| bifunctional polymyxin resistance protein ArnA [Salmonella enterica
subsp. enterica serovar Kentucky str. CVM29188]
gi|205335787|gb|EDZ22551.1| NAD dependent epimerase/dehydratase family protein [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
Length = 660
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/366 (33%), Positives = 195/366 (53%), Gaps = 34/366 (9%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D +EA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGVEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
Query: 312 VSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
P V S+ +YG+GY D R P + + L W P ++ D +E TL
Sbjct: 588 HPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEETL 646
Query: 369 TYQHRT 374
+ R+
Sbjct: 647 DFFLRS 652
>gi|340000038|ref|YP_004730921.1| lipopolysaccharide modification protein [Salmonella bongori NCTC
12419]
gi|339513399|emb|CCC31149.1| putative lipopolysaccharide modification protein [Salmonella
bongori NCTC 12419]
Length = 660
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 194/365 (53%), Gaps = 32/365 (8%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAIGRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + +KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYHKR 426
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
++ ST EVYG + ED S I G + K RW Y+ +KQL++
Sbjct: 427 VVFPSTSEVYGMCTDT---------------SFDEDKSNLIVGPVNKPRWIYSVSKQLLD 471
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+
Sbjct: 472 RVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLI 528
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 529 DGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPENEASIQELATLLLDSFDKH 588
Query: 313 SGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
P V S +YG+GY D R P++ + L W P ++ D +E TL
Sbjct: 589 PLRRHF-PPFAGFQIVESGSYYGKGYQDVAHRKPNINNARRCLDWEPSITMRDTVEETLD 647
Query: 370 YQHRT 374
+ R+
Sbjct: 648 FFLRS 652
>gi|91783426|ref|YP_558632.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
xenovorans LB400]
gi|91687380|gb|ABE30580.1| Putative nucleoside-diphosphate-sugar epimerase, WcaG-like protein
[Burkholderia xenovorans LB400]
Length = 348
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 187/346 (54%), Gaps = 31/346 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLINHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPEESQLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A G I+N+GNP N +VR+LA M + A+
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKDGVATGKIYNIGNPTNNFSVRELAHKMLTLAAEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
+ A + V+ SS +YG GY D R+P + Q+LGW P+++
Sbjct: 278 DTAKQVQLVETSSGAYYGAGYQDVQNRVPKIDNTMQELGWAPRSTF 323
>gi|171317887|ref|ZP_02907064.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5]
gi|171096956|gb|EDT41826.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5]
Length = 340
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 187/343 (54%), Gaps = 31/343 (9%)
Query: 27 GFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK-HDSRLEG 85
GFIG HL ++IL T ++ +D+ D++ L+ E R+ F +I + +E
Sbjct: 3 GFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVNHE------RMHFFEGDITINKEWVEY 56
Query: 86 LIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK 145
+K D+ + L AI TPA Y +PL +F LP+V+ + K L+ ST EVYG
Sbjct: 57 HVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGM 116
Query: 146 TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGL 205
S + DP DAS +G I K RW YAC+KQL++R+I+ G E GL
Sbjct: 117 C--------SDEQFDP-------DASALTYGPINKPRWIYACSKQLMDRVIWGYGME-GL 160
Query: 206 EFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYI 265
FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG +R F I
Sbjct: 161 NFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTDI 217
Query: 266 KDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEV---YAKVSGEAALEEP 321
D I A++ +I+N A+G I+N+GNP N +VR+LA M E+ Y + +G A +
Sbjct: 218 DDGISALMKIIDNQNGVASGKIYNIGNPKNNFSVRELAHKMLELAAEYPEYAGSAK-QVQ 276
Query: 322 TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
V+ +S +YG GY D R+P + Q+L W P+++ D L
Sbjct: 277 LVETTSGAYYGNGYQDVQNRVPKIDNTMQELAWAPQSTFDDAL 319
>gi|421166240|ref|ZP_15624504.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa ATCC 700888]
gi|404538808|gb|EKA48325.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa ATCC 700888]
gi|453047443|gb|EME95157.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PA21_ST175]
Length = 662
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGAASG-PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPTIELRETIGKTLDF 649
>gi|451988462|ref|ZP_21936590.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase / Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Pseudomonas
aeruginosa 18A]
gi|451753877|emb|CCQ89113.1| Polymyxin resistance protein ArnA_DH,UDP-glucuronic acid
decarboxylase / Polymyxin resistance protein ArnA_FT,
UDP-4-amino-4-deoxy-L-arabinose formylase [Pseudomonas
aeruginosa 18A]
Length = 662
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGAASG-PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPTIELRETIGKTLDF 649
>gi|116051552|ref|YP_789611.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|296387943|ref|ZP_06877418.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PAb1]
gi|313108902|ref|ZP_07794883.1| putative transformylase [Pseudomonas aeruginosa 39016]
gi|386067584|ref|YP_005982888.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982727|ref|YP_006481314.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa DK2]
gi|416877566|ref|ZP_11919866.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa 152504]
gi|419754859|ref|ZP_14281217.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PADK2_CF510]
gi|421173207|ref|ZP_15630960.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa CI27]
gi|122260693|sp|Q02R25.1|ARNA_PSEAB RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|115586773|gb|ABJ12788.1| putative transformylase [Pseudomonas aeruginosa UCBPP-PA14]
gi|310881385|gb|EFQ39979.1| putative transformylase [Pseudomonas aeruginosa 39016]
gi|334839467|gb|EGM18151.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa 152504]
gi|348036143|dbj|BAK91503.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398677|gb|EIE45082.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318232|gb|AFM63612.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa DK2]
gi|404536308|gb|EKA45951.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa CI27]
Length = 662
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGAASG-PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPTIELRETIGKTLDF 649
>gi|254236474|ref|ZP_04929797.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126168405|gb|EAZ53916.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 662
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGAASG-PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPMRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPTIELRETIGKTLDF 649
>gi|421152638|ref|ZP_15612216.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa ATCC 14886]
gi|404524950|gb|EKA35238.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa ATCC 14886]
Length = 662
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGAASG-PKRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPTIELRETIGKTLDF 649
>gi|355640153|ref|ZP_09051596.1| bifunctional polymyxin resistance protein ARNA [Pseudomonas sp.
2_1_26]
gi|354831477|gb|EHF15491.1| bifunctional polymyxin resistance protein ARNA [Pseudomonas sp.
2_1_26]
Length = 662
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGAASG-PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPTIELRETIGKTLDF 649
>gi|218890219|ref|YP_002439083.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa LESB58]
gi|420138566|ref|ZP_14646467.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa CIG1]
gi|421158955|ref|ZP_15618137.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa ATCC 25324]
gi|226723719|sp|B7VBN2.1|ARNA_PSEA8 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|218770442|emb|CAW26207.1| putative transformylase [Pseudomonas aeruginosa LESB58]
gi|403248693|gb|EJY62248.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa CIG1]
gi|404548806|gb|EKA57745.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa ATCC 25324]
Length = 662
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 129/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGAASG-PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPTIELRETIGKTLDF 649
>gi|417672978|ref|ZP_12322436.1| bifunctional polymyxin resistance protein arnA domain protein,
partial [Shigella dysenteriae 155-74]
gi|332090752|gb|EGI95845.1| bifunctional polymyxin resistance protein arnA domain protein
[Shigella dysenteriae 155-74]
Length = 420
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 187/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E +L E +++ LD+ +D I L + FH +
Sbjct: 78 VLILGVNGFIGNHLTECLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 129
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 130 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 189
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 190 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 234
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GP++D ++ G R + NL+ P+KL+DGG
Sbjct: 235 WAYGEKEGLQFTLFRPFNWMGPQLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 291
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 292 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 351
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 352 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 410
Query: 373 RT 374
RT
Sbjct: 411 RT 412
>gi|423691648|ref|ZP_17666168.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
fluorescens SS101]
gi|388002438|gb|EIK63767.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
fluorescens SS101]
Length = 663
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 195/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N +G I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNGVCDGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRHNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIENAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPSVEMSETIGNTLDF 650
>gi|398840184|ref|ZP_10597422.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM102]
gi|398111202|gb|EJM01092.1| methionyl-tRNA formyltransferase [Pseudomonas sp. GM102]
Length = 669
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 196/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R G + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGGAPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + ++ I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHFVEGDISIHSEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED+S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDGNF---DEDSSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPINKQRWIYSTSKQLLDRVIWAYG-QKGLNFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D +EA+ +I+N A NG I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNENDACNGQIINIGNPD 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + D+ SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRNNFPPFAGFRDIESKAFYGTGYQDVSHRKPSIANAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LDWIPTVEMSETIGNTLDF 650
>gi|110806222|ref|YP_689742.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella flexneri 5 str. 8401]
gi|417702836|ref|ZP_12351947.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-218]
gi|417739092|ref|ZP_12387672.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
4343-70]
gi|418257242|ref|ZP_12880910.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri 6603-63]
gi|424838623|ref|ZP_18263260.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella flexneri 5a str. M90T]
gi|123342672|sp|Q0T2M8.1|ARNA_SHIF8 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|110615770|gb|ABF04437.1| putative transformylase [Shigella flexneri 5 str. 8401]
gi|332754903|gb|EGJ85268.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
4343-70]
gi|333001696|gb|EGK21262.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-218]
gi|383467675|gb|EID62696.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella flexneri 5a str. M90T]
gi|397896864|gb|EJL13275.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri 6603-63]
Length = 660
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ PFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSCYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|24113631|ref|NP_708141.1| transformylase [Shigella flexneri 2a str. 301]
gi|30063686|ref|NP_837857.1| hypothetical protein S2467, partial [Shigella flexneri 2a str.
2457T]
gi|384543912|ref|YP_005727975.1| Bifunctional polymyxin resistance protein arnA, partial [Shigella
flexneri 2002017]
gi|415853428|ref|ZP_11529404.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
2a str. 2457T]
gi|417729180|ref|ZP_12377878.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-671]
gi|420342578|ref|ZP_14844051.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
K-404]
gi|24052690|gb|AAN43848.1| putative transformylase [Shigella flexneri 2a str. 301]
gi|30041941|gb|AAP17667.1| putative transformylase [Shigella flexneri 2a str. 2457T]
gi|281601698|gb|ADA74682.1| Bifunctional polymyxin resistance protein arnA [Shigella flexneri
2002017]
gi|313651079|gb|EFS15478.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
2a str. 2457T]
gi|332755305|gb|EGJ85669.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-671]
gi|391265651|gb|EIQ24618.1| bifunctional polymyxin resistance protein ArnA [Shigella flexneri
K-404]
Length = 516
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 174 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 225
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 226 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 285
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 286 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 330
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ PFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 331 WAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 387
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 388 KQKRCFTDIRDGIEALYHIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 447
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 448 HHF-PPFAGFRVVESSCYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 506
Query: 373 RT 374
RT
Sbjct: 507 RT 508
>gi|194433309|ref|ZP_03065589.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella dysenteriae 1012]
gi|194418403|gb|EDX34492.1| UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Shigella dysenteriae 1012]
Length = 660
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 187/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E +L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTECLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GP++D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPQLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|317054333|ref|YP_004118358.1| NAD-dependent epimerase/dehydratase [Pantoea sp. At-9b]
gi|316952328|gb|ADU71802.1| NAD-dependent epimerase/dehydratase [Pantoea sp. At-9b]
Length = 659
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 187/359 (52%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I L G F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFEVYGLDISSDAISRFL------GHPGFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDRHF---------------DEDNSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I+D +EA+ +IEN +G I N+GNP NE ++++LAE + + + + +
Sbjct: 534 KRCFTDIRDGVEALFRIIENKQNNCDGQIINIGNPENEASIKELAEQLLASFERHPLRDQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + LGW P+ + +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIKNARRLLGWTPEVQMDITIDNTLDFFLRT 652
>gi|387893865|ref|YP_006324162.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
fluorescens A506]
gi|387163939|gb|AFJ59138.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
fluorescens A506]
Length = 663
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 195/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N +G I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNGVCDGQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRHNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIDNAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPSVEMSETIGNTLDF 650
>gi|420373658|ref|ZP_14873726.1| NAD dependent epimerase/dehydratase family protein [Shigella
flexneri 1235-66]
gi|391317033|gb|EIQ74413.1| NAD dependent epimerase/dehydratase family protein [Shigella
flexneri 1235-66]
Length = 392
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 190/367 (51%), Gaps = 44/367 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 50 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 109
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 110 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 156
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 157 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 201
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ PFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 202 LDRVIWAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 258
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ +
Sbjct: 259 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFE 318
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S +YG+GY D + R P + ++ L W PK + + ++ T
Sbjct: 319 KHPLRHHF-PPFAGFRVVESSCYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDET 377
Query: 368 LTYQHRT 374
L + RT
Sbjct: 378 LDFFLRT 384
>gi|417734061|ref|ZP_12382712.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
2747-71]
gi|417744134|ref|ZP_12392660.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri 2930-71]
gi|83287940|sp|Q83QT8.2|ARNA_SHIFL RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|332756135|gb|EGJ86486.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
2747-71]
gi|332766075|gb|EGJ96285.1| fused UDP-L-Ara4N formyltransferase and UDP-GlcA
C-4''-decarboxylase [Shigella flexneri 2930-71]
Length = 660
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 188/362 (51%), Gaps = 34/362 (9%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ PFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 532 KQKRCFTDIRDGIEALYHIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 591
Query: 316 AALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
P V S +YG+GY D + R P + ++ L W PK + + ++ TL +
Sbjct: 592 HHF-PPFAGFRVVESSCYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFL 650
Query: 373 RT 374
RT
Sbjct: 651 RT 652
>gi|415822864|ref|ZP_11511383.1| bifunctional polymyxin resistance protein arnA domain protein
[Escherichia coli OK1180]
gi|417191850|ref|ZP_12013950.1| putative UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 4.0522]
gi|417592548|ref|ZP_12243245.1| bifunctional polymyxin resistance protein arnA domain protein
[Escherichia coli 2534-86]
gi|419889701|ref|ZP_14410064.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H8 str.
CVM9570]
gi|419894837|ref|ZP_14414721.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H8 str.
CVM9574]
gi|420090997|ref|ZP_14602755.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H8 str.
CVM9602]
gi|432737772|ref|ZP_19972530.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE42]
gi|323176819|gb|EFZ62409.1| bifunctional polymyxin resistance protein arnA domain protein
[Escherichia coli OK1180]
gi|345338885|gb|EGW71312.1| bifunctional polymyxin resistance protein arnA domain protein
[Escherichia coli 2534-86]
gi|386190732|gb|EIH79478.1| putative UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Escherichia coli 4.0522]
gi|388356843|gb|EIL21502.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H8 str.
CVM9570]
gi|388362923|gb|EIL26888.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H8 str.
CVM9574]
gi|394384376|gb|EJE61936.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli O111:H8 str.
CVM9602]
gi|431282232|gb|ELF73117.1| bifunctional polymyxin resistance protein ARNA [Escherichia coli
KTE42]
Length = 338
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 120/360 (33%), Positives = 187/360 (51%), Gaps = 44/360 (12%)
Query: 27 GFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQFHRLNIK 78
GFIG+HL E++L E +++ LD+ +D I H +E + ++ I++H
Sbjct: 3 GFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYH----- 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+K D+ + L AI TP +Y PL +F + L +++YC + KR+I S
Sbjct: 58 --------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPS 109
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + ED S I G + K RW Y+ +KQL++R+I+A
Sbjct: 110 TSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWA 154
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+
Sbjct: 155 YGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 211
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 212 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHH 271
Query: 318 LEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V S +YG+GY D + R P + ++ L W PK + + ++ TL + RT
Sbjct: 272 F-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 330
>gi|15598750|ref|NP_252244.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PAO1]
gi|107103066|ref|ZP_01366984.1| hypothetical protein PaerPA_01004135 [Pseudomonas aeruginosa PACS2]
gi|254242256|ref|ZP_04935578.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|386057499|ref|YP_005974021.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa M18]
gi|418584213|ref|ZP_13148277.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418594234|ref|ZP_13158044.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421179296|ref|ZP_15636890.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa E2]
gi|421518096|ref|ZP_15964770.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PAO579]
gi|81622194|sp|Q9HY63.1|ARNA_PSEAE RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|9949706|gb|AAG06942.1|AE004776_5 ArnA [Pseudomonas aeruginosa PAO1]
gi|126195634|gb|EAZ59697.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|347303805|gb|AEO73919.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa M18]
gi|375044636|gb|EHS37232.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa MPAO1/P2]
gi|375046060|gb|EHS38628.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa MPAO1/P1]
gi|404347578|gb|EJZ73927.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PAO579]
gi|404547280|gb|EKA56287.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa E2]
Length = 662
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 189/365 (51%), Gaps = 37/365 (10%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH 73
P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L F
Sbjct: 314 PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL------KADPHFHFV 367
Query: 74 RLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
+I H LE +K D+ + L AI TP +Y PL +F + L +V+YC + K
Sbjct: 368 EGDIGIHSEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLRIVRYCVKYGK 427
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
R++ ST EVYG QDP + ED S + G I KQRW Y+ +KQL+
Sbjct: 428 RVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQRWIYSVSKQLL 472
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D +D G R + +L+ P++L
Sbjct: 473 DRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLDSARIGSSRAITQLILHLVEGTPIRL 528
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY-- 309
VDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + +
Sbjct: 529 VDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEA 588
Query: 310 ----AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
A+ A E V S+ FYG+GY D R P + + L W P L + +
Sbjct: 589 HPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIDNARRLLDWQPTIELRETIG 644
Query: 366 STLTY 370
TL +
Sbjct: 645 KTLDF 649
>gi|445498489|ref|ZP_21465344.1| UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic
acid oxidase ArnA [Janthinobacterium sp. HH01]
gi|444788484|gb|ELX10032.1| UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic
acid oxidase ArnA [Janthinobacterium sp. HH01]
Length = 350
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 131/367 (35%), Positives = 194/367 (52%), Gaps = 29/367 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T + +D+ D+I +LE E+ R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWHVYGMDMSTDRITDVLENEAYK--SRMHFFEGDITI 61
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TP+ Y PL +F LP+V+ ++ K L+ S
Sbjct: 62 NKEWVEYHVKKCDVILPLVAIATPSTYVKAPLRVFELDFEANLPIVRSAAKYGKHLVFPS 121
Query: 139 TCEVYGKTIG-SFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG F P++S L + G I K RW Y+ AKQL++R+I+
Sbjct: 122 TSEVYGMCHDDEFDPENSEL----------------VCGPINKPRWIYSNAKQLMDRVIW 165
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIG +D I P EG RV+ F +++R + + LVDGG
Sbjct: 166 GYGME-GLNFTLFRPFNWIGAGLD---SIHTPKEGSSRVVTQFFGHIVRGENISLVDGGA 221
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMM---TEVYAKVS 313
+R F I D I+A++ +I N A+G I+N+GNP N ++R LA MM E Y + +
Sbjct: 222 QKRAFTDIDDGIDALMKIIANKDGAASGKIYNIGNPVNNYSIRDLAGMMLKLAEEYPEYA 281
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
A + V+ +S +YG GY D R+P +T ++LGW P TS+ D L+
Sbjct: 282 -TGAKQVKIVETTSGAYYGTGYQDVQNRVPKITNTCEELGWKPTTSMADALKKIFDAYRG 340
Query: 374 TYAEAIK 380
AEA K
Sbjct: 341 QVAEAQK 347
>gi|187923788|ref|YP_001895430.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
phytofirmans PsJN]
gi|187714982|gb|ACD16206.1| NAD-dependent epimerase/dehydratase [Burkholderia phytofirmans
PsJN]
Length = 348
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 186/346 (53%), Gaps = 31/346 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLINHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T F P++S L +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMCTDEQFDPEESQLS----------------YGPINKPRWIYACSKQLMDRVIW 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 162 GYGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGA 217
Query: 258 SQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F I D I A++ +IEN A G I+N+GNP N +VR+LA M + A+
Sbjct: 218 QKRAFTDIDDGIGALMKIIENKDGVATGKIYNIGNPTNNFSVRELAHKMLTLAAEFPEYA 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
+ A + V+ SS +YG GY D R+P + Q+L W PK++
Sbjct: 278 DTAKQVQLVETSSGAYYGAGYQDVQNRVPKIDNTMQELDWAPKSTF 323
>gi|390572049|ref|ZP_10252276.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
terrae BS001]
gi|420256817|ref|ZP_14759635.1| nucleoside-diphosphate-sugar epimerase [Burkholderia sp. BT03]
gi|389936032|gb|EIM97933.1| NAD-dependent epimerase/dehydratase family protein [Burkholderia
terrae BS001]
gi|398042488|gb|EJL35497.1| nucleoside-diphosphate-sugar epimerase [Burkholderia sp. BT03]
Length = 348
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 189/363 (52%), Gaps = 29/363 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG HL ++IL T ++ +D+ +++ L+ E R+ F +I
Sbjct: 4 VLILGVNGFIGHHLSKRILETTDWEVFGMDMQTERLGDLVNHE------RMHFFEGDITI 57
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ +E +K D+ + L AI TPA Y +PL +F LP+V+ + K L+ S
Sbjct: 58 NKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG S + DP D S +G I K RW YAC+KQL++R+I+
Sbjct: 118 TSEVYGMC--------SDEQFDP-------DESALTYGPINKPRWIYACSKQLMDRVIWG 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL FT+ RPFNWIGP +D I P EG RV+ F +++R + + LVDGG
Sbjct: 163 YGME-GLNFTLFRPFNWIGPGLD---SIYTPKEGSSRVVTQFLGHIVRGENISLVDGGAQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GE 315
+R F I D I A++ +I+N A G I+N+GNP N +VR+LA M + A+ E
Sbjct: 219 KRAFTDIDDGISALMKIIDNKDGIATGKIYNIGNPTNNFSVRELAHKMLALAAEFPEYAE 278
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
A + V+ SS +YG GY D R+P + Q+L W P ++ + L
Sbjct: 279 TAKKVQLVETSSGAYYGAGYQDVQNRVPKIDNTMQELSWAPHSTFDEALRKIFEAYRGHV 338
Query: 376 AEA 378
AEA
Sbjct: 339 AEA 341
>gi|152986831|ref|YP_001346975.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas aeruginosa PA7]
gi|166988217|sp|A6V1P0.1|ARNA_PSEA7 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|150961989|gb|ABR84014.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 662
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 194/376 (51%), Gaps = 38/376 (10%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
GA +R G P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L
Sbjct: 304 GARLRGPASG-PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL---- 358
Query: 63 SQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
F +I H LE +K D+ + L AI TP +Y PL +F + L
Sbjct: 359 --KADPHFHFVEGDIGIHSEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENL 416
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
+V+YC + KR++ ST EVYG QDP + ED S + G I KQ
Sbjct: 417 RIVRYCVKYGKRVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQ 461
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R +
Sbjct: 462 RWIYSVSKQLLDRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLESARIGSSRAITQLI 517
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQ 300
+L+ P++LVDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQ
Sbjct: 518 LHLVEGTPIRLVDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQ 577
Query: 301 LAEMMTEVY------AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGW 354
L E + + A+ A E V S+ FYG+GY D R P + + L W
Sbjct: 578 LGEELLRQFEAHPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIENARRLLDW 633
Query: 355 NPKTSLWDLLESTLTY 370
P L + + TL +
Sbjct: 634 QPAIELRETIGKTLDF 649
>gi|377576680|ref|ZP_09805664.1| bifunctional polymyxin resistance protein ArnA [Escherichia
hermannii NBRC 105704]
gi|377542712|dbj|GAB50829.1| bifunctional polymyxin resistance protein ArnA [Escherichia
hermannii NBRC 105704]
Length = 660
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 191/359 (53%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + LD+ +D I + G R QF +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDKNFDVYGLDISSDAISRFI------GHPRFQFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H ++ IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIQYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYQKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + DS ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYG------MCHDSNF---------DEDRSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 477 YGEKEGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGE 315
+R F I+D +EA+ +IE+ NG I N+GNP NE ++++LAE + + + + +
Sbjct: 534 KRCFTDIQDGVEALFRIIEDKHNHCNGQIINIGNPDNEASIKELAERLLAHFERHPLRDQ 593
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + L W P ++ +E+TL + R+
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIKNARRLLDWTPMVNMDITIENTLDFFLRS 652
>gi|398794439|ref|ZP_10554489.1| methionyl-tRNA formyltransferase [Pantoea sp. YR343]
gi|398208591|gb|EJM95308.1| methionyl-tRNA formyltransferase [Pantoea sp. YR343]
Length = 659
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 185/359 (51%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + ++ LD+ +D I L+ R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFEVYGLDIGSDAISRFLD------QPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDKHF---------------DEDHSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I+D IEA+ +IEN +G I N+GNP NE ++++LAE + + + +
Sbjct: 534 KRCFTDIQDGIEALFRIIENKQNNCDGQIVNIGNPDNEASIKELAERLLASFERHPLRSN 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + L W P + +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIKNARRLLDWTPTVEMDTTIDNTLDFFLRT 652
>gi|388470998|ref|ZP_10145207.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
synxantha BG33R]
gi|388007695|gb|EIK68961.1| bifunctional polymyxin resistance protein ArnA [Pseudomonas
synxantha BG33R]
Length = 663
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 194/379 (51%), Gaps = 43/379 (11%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK------ 56
G+ +R GR + + ++G GFIG+HL E++L + +++ LD+ +D I+
Sbjct: 304 GSVLRGAESGRKPRRTRVLILGVNGFIGNHLSERLLRDDRYEVYGLDIGSDAIERLRSHP 363
Query: 57 --HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIY 114
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 364 NFHYVEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRVFE 410
Query: 115 SNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCI 174
+F + L +V+YC + NKR+I ST EVYG + QD + ED S +
Sbjct: 411 LDFEENLKLVRYCVKYNKRVIFPSTSEVYG------------MCQDQYF---DEDTSNLV 455
Query: 175 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
G + KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 456 VGPVNKQRWIYSVSKQLLDRVIWAYG-DKGLKFTLFRPFNWMGPRLD---RLDSARIGSS 511
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPH 293
R + NL+ P++L DGG+ +R F I D IEA+ +I+N + I N+GNP
Sbjct: 512 RAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGIEALARIIDNDNGVCDSQIINIGNPE 571
Query: 294 NEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQ 351
NE ++RQL E + + + DV SK FYG GY D R P + +
Sbjct: 572 NEASIRQLGEELLRQFEAHPLRHNFPPFAGFRDVESKAFYGTGYQDVAHRKPSIENAKRL 631
Query: 352 LGWNPKTSLWDLLESTLTY 370
L W P + + + +TL +
Sbjct: 632 LNWEPSVQMSETIGNTLDF 650
>gi|145300198|ref|YP_001143039.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|166988212|sp|A4SQW9.1|ARNA_AERS4 RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|142852970|gb|ABO91291.1| Bifunctional polymyxin resistance protein ArnA [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 663
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 187/364 (51%), Gaps = 32/364 (8%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF 72
R + + ++G GFIG+HL E++L + ++I LD+ + + D F
Sbjct: 313 RKERLTRVLILGVNGFIGNHLTERLLKDGRYEIYGLDISASALGRFI--------DHPHF 364
Query: 73 HRLNIK---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
H + H +E IK D+ + L AI TP +Y PL +F + L +V+YC +
Sbjct: 365 HFVEGDISIHTEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVK 424
Query: 130 NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
NKR+I ST EVYG + D ++ ED S I G I KQRW Y+ +K
Sbjct: 425 YNKRIIFPSTSEVYG------------MCDDHSF---DEDESRLIVGPIHKQRWIYSVSK 469
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
QL++R+I+A G + GL FT+ RPFNW+GPR+D +D G R + NL+ P
Sbjct: 470 QLLDRVIWAYGKKEGLNFTLFRPFNWMGPRLD---SLDSARIGSSRAITQLILNLVDGTP 526
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEV 308
++LVDGG +R F I+D IEA+ +IEN R +G I N+G+P NE ++ Q+AE++
Sbjct: 527 IQLVDGGAQKRCFTDIEDGIEALFRIIENKGNRCDGQIINIGSPDNEASILQMAEVLLGK 586
Query: 309 YAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ + V SK FYG+GY D R P + + L W P + + +
Sbjct: 587 FEAHPLRHHFPPFAGFKRVESKSFYGDGYQDVSHRRPSIKNARRLLDWEPTIEMEETIGK 646
Query: 367 TLTY 370
TL +
Sbjct: 647 TLDF 650
>gi|452881101|ref|ZP_21957957.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Pseudomonas aeruginosa
VRFPA01]
gi|452182588|gb|EME09606.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Pseudomonas aeruginosa
VRFPA01]
Length = 362
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/378 (33%), Positives = 193/378 (51%), Gaps = 38/378 (10%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH 73
P + + ++G GFIG+HL E++L + +++ +D+ +D I+ L F
Sbjct: 14 PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERL------KADPHFHFV 67
Query: 74 RLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
+I H LE +K D+ + L AI TP +Y PL +F + L +V+YC + K
Sbjct: 68 EGDIGIHSEWLEYHVKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLRIVRYCVKYGK 127
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
R++ ST EVYG QDP + ED S + G I KQRW Y+ +KQL+
Sbjct: 128 RVVFPSTSEVYGMC------------QDPDF---DEDRSNLVVGPINKQRWIYSVSKQLL 172
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + +L+ P++L
Sbjct: 173 DRVIWAYG-QQGLRFTLFRPFNWMGPRLD---RLESARIGSSRAITQLILHLVEGTPIRL 228
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY-- 309
VDGG +R F + D IEA+ +I+N R +G I N+GNP NE ++RQL E + +
Sbjct: 229 VDGGAQKRCFTDVDDGIEALARIIDNRDGRCDGQIVNIGNPDNEASIRQLGEELLRQFEA 288
Query: 310 ----AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
A+ A E V S+ FYG+GY D R P + + L W P L + +
Sbjct: 289 HPLRAQFPPFAGFRE----VESRSFYGDGYQDVAHRKPSIENARRLLDWQPAIELRETIG 344
Query: 366 STLT-YQHRTYAEAIKQA 382
TL + H E QA
Sbjct: 345 KTLDFFLHEALREREAQA 362
>gi|288573340|ref|ZP_06391697.1| NAD-dependent epimerase/dehydratase [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569081|gb|EFC90638.1| NAD-dependent epimerase/dehydratase [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 337
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 195/363 (53%), Gaps = 41/363 (11%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ + ++GA GFIGSHL ++IL +T + A D+ +D ++ P RL+I
Sbjct: 1 MNVFLLGANGFIGSHLIDRILEKTDWTVTAFDLRDDNLRGSDNP------------RLSI 48
Query: 78 K------HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
K D +E I +D+ I LA I PA Y T PL T +F L +V+ C+E+
Sbjct: 49 KLGDLYEEDRWIEDEIARSDVVIPLAGIAKPAYYITNPLMTFELDFEQNLKIVRMCAEHG 108
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R+I ST EVYG + G +L ED S I G I+ RW Y+C+KQ+
Sbjct: 109 IRIIFPSTSEVYGMSTGDWL---------------MEDESLLIQGPIKNSRWIYSCSKQM 153
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMD-FIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
++R+I A G E GL +T+ RPFNWIGPR+D F + + + +++ S +P+
Sbjct: 154 MDRVIAAYGQEKGLPYTLFRPFNWIGPRLDTFRDAENRKARSITQMIYDVSVG----RPI 209
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
LVDGG+ +R+F Y+ D ++A++ +I + + A+G IFN+GNP + +++ LA + +
Sbjct: 210 TLVDGGRQRRSFTYVTDGVDALIAIIADVKKSADGEIFNIGNPDSNHSIKGLAVAVVDAM 269
Query: 310 AKVS--GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
EAA + V+ S E+YG GY+D R P ++ + L W+P+ + + T
Sbjct: 270 KDFPKFAEAASKATFVEKDSTEYYGRGYEDVQDRKPSISKAEELLDWHPQVDFHEAVRRT 329
Query: 368 LTY 370
+ +
Sbjct: 330 VAF 332
>gi|406941583|gb|EKD74037.1| Bifunctional polymyxin resistance protein ArnA (Polymyxin
resistanceprotein pmrI) [uncultured bacterium]
Length = 343
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/357 (34%), Positives = 194/357 (54%), Gaps = 31/357 (8%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++GA GFIG+HL + ++ ET +I A+D+ +D++ L+ R F +I
Sbjct: 3 LLLLGANGFIGNHLTKSVMTETDWQIDAIDIASDRLGAYLQ------HPRFHFQLGDITR 56
Query: 80 DSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
++ ++ I D+ + L AI TPA Y PL +F L +++ +++KR+I S
Sbjct: 57 ETDWVDEKIAACDVILPLVAIATPALYVQDPLRVFELDFEANLRIIRLAVKHHKRIIFPS 116
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P V E+ S + G I K+RW Y+ +KQL++RLIYA
Sbjct: 117 TSEVYG-----MCPD----------MVFDEEESVLVTGPIHKERWIYSTSKQLLDRLIYA 161
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +GL +T+ RPFNW GP +D P G RVL F N+LR + ++LV+GG
Sbjct: 162 YGKHHGLPYTLFRPFNWYGPYLD---NPLNPKPGSSRVLTQFIGNILRGEDIQLVNGGAQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEV----YAKVS 313
R F YI D I A++ +IEN A+ IFN+GNP + ++R+LAEM+ + Y +
Sbjct: 219 MRAFTYIDDGIAALMRIIENKDNCAHNRIFNIGNPAADFSIRELAEMIQRLIITDYPQYQ 278
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A+ + + V + +++GEGY D KR+P + + L W+PK + L+ TL +
Sbjct: 279 ANASAAKLQL-VEATQYFGEGYQDVSKRVPAIFRAQRDLNWSPKVDMVTGLKKTLDF 334
>gi|160872473|ref|ZP_02062605.1| bifunctional polymyxin resistance protein ArnA (Polymyxin
resistanceprotein pmrI) [Rickettsiella grylli]
gi|159121272|gb|EDP46610.1| bifunctional polymyxin resistance protein ArnA (Polymyxin
resistanceprotein pmrI) [Rickettsiella grylli]
Length = 337
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 192/359 (53%), Gaps = 32/359 (8%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR--L 75
+ + ++G GFIGSHL E L +T ++ LD+ ++ I L+ R+ F + +
Sbjct: 3 LKVFILGINGFIGSHLLEHCLTKTEWDLIGLDLADNNISEFLQ------HPRLIFKKGDM 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
N +H + + I D+ + L AI TPA Y PL +F L +++ C ++ KR++
Sbjct: 57 NWEH-AWISQQIHACDVVLPLVAIATPAHYVKNPLAIFELDFEANLNIIRQCVQHKKRIV 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG + E+ S + G I K RW Y+C KQL++R+
Sbjct: 116 FPSTSEVYGMCTDE---------------LFDEETSNFVQGPIHKSRWIYSCCKQLLDRV 160
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
I+A G +N L +T+ RPFNW+G ++D P G RV++ F N+LR +P++LV+G
Sbjct: 161 IHAYGLKNELRYTLFRPFNWVGAKLD---NPHNPKPGSSRVVSQFIGNILRGEPIQLVNG 217
Query: 256 GQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GQ +R FI I D + +L +I N A+ IFNVGNP N++++R+LAE++ +
Sbjct: 218 GQQRRCFIDIDDGMACLLKIIANDKGCADQAIFNVGNPANDISIRELAELLLSLIKTYPN 277
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNP----KTSLWDLLESTLT 369
+S+ +YG+GY D ++R+P + Q+L W P KTSL +L+ L
Sbjct: 278 YVQAPIKLQTISASRYYGKGYQDVERRLPSIKQAEQRLDWQPHIDIKTSLKKILDFYLV 336
>gi|398801535|ref|ZP_10560776.1| methionyl-tRNA formyltransferase [Pantoea sp. GM01]
gi|398091649|gb|EJL82082.1| methionyl-tRNA formyltransferase [Pantoea sp. GM01]
Length = 659
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 183/359 (50%), Gaps = 28/359 (7%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L + + LD+ +D I LE R F +I
Sbjct: 318 VLILGVNGFIGNHLTERLLQDDNFDVYGLDIGSDAISRFLE------QPRFHFVEGDISI 371
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E IK D+ + L AI TP +Y PL +F + L +++ C + KR+I S
Sbjct: 372 HSEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPS 431
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG ED S + G I KQRW Y+ +KQL++R+I+A
Sbjct: 432 TSEVYGMCTDQHF---------------DEDHSNLVVGPINKQRWIYSVSKQLLDRVIWA 476
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 477 YGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGAQ 533
Query: 259 QRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
+R F I D IEA+ +IEN +G I N+GNP NE ++++LAE + + + +
Sbjct: 534 KRCFTDISDGIEALFRIIENQHNNCDGQIVNIGNPENEASIKELAERLLASFERHPLRSN 593
Query: 318 LE--EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+V S +YG+GY D + R P + + + W P + +++TL + RT
Sbjct: 594 FPPFAGFREVESSSYYGKGYQDVEHRKPSIKNARRLIDWTPTVEMDTTIDNTLDFFLRT 652
>gi|46127541|ref|XP_388324.1| hypothetical protein FG08148.1 [Gibberella zeae PH-1]
Length = 662
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/350 (35%), Positives = 188/350 (53%), Gaps = 25/350 (7%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
T+ ++G GF+G HL +IL T K+ +D+ +I LE + R+ F + +++
Sbjct: 323 TVFILGINGFVGHHLLARILESTNWKVCGIDIEKHRIAGRLE--NAEYKPRLLFRKGHME 380
Query: 79 HD-SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ +E +K +D + LAAI TP + PL +F L +V+ S++ KRLI
Sbjct: 381 ANWDWIEARVKESDAVLPLAAISTPLSFVKSPLRVFEVDFEANLRIVRLASKHKKRLIFP 440
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EVYG + D + + S I G I K RW Y+C+KQL++R+I+
Sbjct: 441 STSEVYG------------MCHDDEF---DTEESQLICGPIHKSRWIYSCSKQLLDRVIF 485
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
GAE GL+FTI RPFNWIGP +D +D RV F N++R + + LVDGG
Sbjct: 486 GYGAE-GLDFTIFRPFNWIGPGLD---SVDNTLLDGSRVTTRFLGNIIRGEDMILVDGGS 541
Query: 258 SQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--G 314
+R F YI D I+A++ +I N A+G I+N+GNP N+ ++R LA +M + A +
Sbjct: 542 QRRVFTYIDDGIDALMKIIVNENDIASGKIYNIGNPANDYSIRDLATLMLDTAATMDEFK 601
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
E+ D +S FYGEGY D R+P +T + L W P ++ D +
Sbjct: 602 ESIANVKLKDGNSTTFYGEGYQDVQHRVPKITSAGENLSWTPLVTMEDAI 651
>gi|301060254|ref|ZP_07201121.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [delta proteobacterium NaphS2]
gi|300445766|gb|EFK09664.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [delta proteobacterium NaphS2]
Length = 674
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 187/371 (50%), Gaps = 39/371 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+ L E++L + +++ +D+++ ++ + GA F +I
Sbjct: 320 VLILGVDGFIGNALSERLLEDGRYEVHGMDLHSKYVERFM------GAPGFHFDEGDISI 373
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E I+ D+ I L AI TP +Y PL +F + L VV+YC + KR+I S
Sbjct: 374 HREWIEYHIRKCDIVIPLVAIATPIEYTRNPLRVFELDFEENLRVVRYCVKYGKRVIFPS 433
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG +D+ S I G I QRW Y+C+KQL++R+I+A
Sbjct: 434 TSEVYGMCDDDDFDEDT---------------SRLILGPIRMQRWIYSCSKQLLDRVIWA 478
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G + L+FT+ RPFNWIGPR+D + G R + NL+ P++LVD G
Sbjct: 479 YGRQKNLKFTLFRPFNWIGPRLD---SLMSARIGSSRAITQLILNLVEGTPIQLVDSGNQ 535
Query: 259 QRTFIYIKDAIEAVLLMIENPARA-NGHIFNVGNPHNEVTVRQLAEMMTEVY------AK 311
+R F + D +E + +IEN +G I N+GNP NE ++R LAE++ E + +
Sbjct: 536 KRCFTDVTDGVECLYRIIENKGDVCDGRIINIGNPENEASIRSLAELLVEKFNRHPLKER 595
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
A L E V S+ +YGEGY D R P + L W P L +E TL Y
Sbjct: 596 FPPFAGLRE----VESRTYYGEGYQDMAHRKPSIRNAKHLLDWEPTVPLETSVEETLDYF 651
Query: 372 HRTYAEAIKQA 382
R EAI+
Sbjct: 652 LR---EAIRSG 659
>gi|437362800|ref|ZP_20748456.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
gi|435209741|gb|ELN93033.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22558]
Length = 332
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 120/351 (34%), Positives = 186/351 (52%), Gaps = 34/351 (9%)
Query: 31 SHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHRLNIK-HDSRLEGLIK 88
+HL E++L E +++ +D+ ++ I + LL P R F +I H +E +K
Sbjct: 1 NHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVEGDISIHSEWIEYHVK 53
Query: 89 MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGK-TI 147
D+ + L AI TP +Y PL +F + L +++YC + KR++ ST EVYG T
Sbjct: 54 KCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPSTSEVYGMCTD 113
Query: 148 GSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEF 207
SF ED S I G + K RW Y+ +KQL++R+I+A G + GL F
Sbjct: 114 ASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRF 157
Query: 208 TIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKD 267
T+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ +R F I+D
Sbjct: 158 TLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRD 214
Query: 268 AIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD-- 324
IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K P
Sbjct: 215 GIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQ 273
Query: 325 -VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
V S+ +YG+GY D R P + + LGW P ++ D +E TL + R+
Sbjct: 274 VVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRS 324
>gi|210077763|gb|ACJ07070.1| putative bifunctional polymyxin resistance arnA protein [Aegilops
speltoides]
Length = 111
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/111 (83%), Positives = 101/111 (90%)
Query: 38 LLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97
+ ETPH +LA+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLA
Sbjct: 1 MAETPHTVLAVDVYCDKIRHLVDPPPPHLAGRIAFHRLNIKNDSRLEGLIKMADLTINLA 60
Query: 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG 148
AICTPADYNTRPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIG
Sbjct: 61 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIG 111
>gi|386705516|ref|YP_006169363.1| Bifunctional polymyxin resistance protein arnA [Escherichia coli
P12b]
gi|383103684|gb|AFG41193.1| Bifunctional polymyxin resistance protein arnA [Escherichia coli
P12b]
Length = 605
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 165/308 (53%), Gaps = 32/308 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ K S
Sbjct: 532 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASLRKTS-- 589
Query: 316 AALEEPTV 323
AA PTV
Sbjct: 590 AAPSFPTV 597
>gi|210077765|gb|ACJ07071.1| putative bifunctional polymyxin resistance arnA protein [Triticum
monococcum]
gi|210077767|gb|ACJ07072.1| putative bifunctional polymyxin resistance arnA protein [Triticum
urartu]
Length = 111
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/111 (82%), Positives = 100/111 (90%)
Query: 38 LLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLA 97
+ ET H +LA+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLA
Sbjct: 1 MAETQHVVLAVDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLA 60
Query: 98 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIG 148
AICTPADYNTRPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEVYGKTIG
Sbjct: 61 AICTPADYNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEVYGKTIG 111
>gi|379009845|ref|YP_005267658.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Wigglesworthia glossinidia endosymbiont of Glossina
morsitans morsitans (Yale colony)]
gi|375158369|gb|AFA41435.1| UDP-L-Ara4N formyltransferase/UDP-GlcA C-4'-decarboxylase
[Wigglesworthia glossinidia endosymbiont of Glossina
morsitans morsitans (Yale colony)]
Length = 652
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 118/368 (32%), Positives = 187/368 (50%), Gaps = 34/368 (9%)
Query: 16 KPV--TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH 73
KP+ I ++G GFIG H+ +++L +KI LD+ + I E +I+F
Sbjct: 312 KPILKKILILGINGFIGYHITKRLLKSNSYKIYGLDLKKNLI------EKFINNSKIKFL 365
Query: 74 RLNIKHDSR-LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
+ NIK S ++ +K D+ + L AI P Y P+ T +F + L +++YC + K
Sbjct: 366 QKNIKSCSHWVKEKVKKCDIILPLIAIARPMQYVQEPIKTFELDFEENLKIIRYCVKYKK 425
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
RLI ST EVYG + D ++ E S + GS+ QRW YA +KQL+
Sbjct: 426 RLIFPSTSEVYG------------MCTDKEFH---ETNSNFVTGSVRNQRWIYASSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G N L FTI RPFNW+G R+D RV+ N+ P+ L
Sbjct: 471 DRIIWAYGKSNNLLFTIFRPFNWVGSRLD---DFKIAQMNHARVITQMIFNIAHGLPINL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
V+ G+ +R F I D IEA+ +IEN N I N+GNP NE ++ +LA+++ + K
Sbjct: 528 VNCGKQKRCFTDIYDGIEALFRIIENKKNNCNQEIINIGNPKNEYSILELAKIVVHTFQK 587
Query: 312 VSGEAALEEPT--VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
+ + + ++ E+YG GY D + R P++ I + L W PK + +T+
Sbjct: 588 FTSSNTFPKFSGFRNLRGDEYYGFGYQDIEYRKPNIGIAQKLLDWKPKIQ----INNTIN 643
Query: 370 YQHRTYAE 377
Y + + +
Sbjct: 644 YMIKFFLQ 651
>gi|437733700|ref|ZP_20832091.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
gi|435287029|gb|ELO64253.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 648901 16-16]
Length = 597
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 167/300 (55%), Gaps = 30/300 (10%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKI-KHLLEPESQTGADRIQFHR 74
+ + + ++G GFIG+HL E++L E +++ +D+ ++ I + LL P R F
Sbjct: 314 RRIRVLILGVNGFIGNHLTERLLNEENYEVYGMDIGSNAISRFLLHP-------RFHFVE 366
Query: 75 LNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+I H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR
Sbjct: 367 GDISIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKR 426
Query: 134 LIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG T SF ED S I G + K RW Y+ +KQL+
Sbjct: 427 VVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLL 470
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
+R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL
Sbjct: 471 DRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKL 527
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 528 IDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDK 587
>gi|427799284|ref|ZP_18967270.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
gi|414064551|gb|EKT45466.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Typhimurium str. STm5]
Length = 311
Score = 187 bits (475), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 161/301 (53%), Gaps = 25/301 (8%)
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR++ S
Sbjct: 23 HSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRVVFPS 82
Query: 139 TCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
T EVYG T SF ED S I G + K RW Y+ +KQL++R+I+
Sbjct: 83 TSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQLLDRVIW 126
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGGQ
Sbjct: 127 AYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIKLIDGGQ 183
Query: 258 SQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + + K
Sbjct: 184 QKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFDKHPLRC 243
Query: 317 ALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P V S+ +YG+GY D R P + + LGW P ++ D +E TL + R
Sbjct: 244 HF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEETLDFFLR 302
Query: 374 T 374
+
Sbjct: 303 S 303
>gi|302800004|ref|XP_002981760.1| hypothetical protein SELMODRAFT_421170 [Selaginella moellendorffii]
gi|300150592|gb|EFJ17242.1| hypothetical protein SELMODRAFT_421170 [Selaginella moellendorffii]
Length = 511
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 112/179 (62%), Gaps = 45/179 (25%)
Query: 211 RPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIE 270
+ FNW GPRMDFIPGIDGPSEG+ RVLA FS NLL+ +P+KLVDGGQSQRTF+YIKDAI+
Sbjct: 66 QSFNWSGPRMDFIPGIDGPSEGIQRVLAFFSTNLLKSEPMKLVDGGQSQRTFVYIKDAID 125
Query: 271 AVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEF 330
V+ M+ Y + S SKEF
Sbjct: 126 TVMRMV-------------------------------AYLRTS-----------YCSKEF 143
Query: 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
YGEGYDDSDKRIPDMTI+ +QL W P L+DLLESTLTYQH+TYA A++Q A +S
Sbjct: 144 YGEGYDDSDKRIPDMTIVKKQLEWEP---LFDLLESTLTYQHKTYARAMQQPAASGTSS 199
>gi|417690384|ref|ZP_12339606.1| bifunctional polymyxin resistance protein arnA domain protein
[Shigella boydii 5216-82]
gi|332088386|gb|EGI93504.1| bifunctional polymyxin resistance protein arnA domain protein
[Shigella boydii 5216-82]
Length = 274
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 149/283 (52%), Gaps = 23/283 (8%)
Query: 96 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDS 155
L AI TP +Y PL +F + L ++ YC + KR+I ST EVYG +
Sbjct: 3 LVAIATPIEYTRNPLRVFELDFEENLRIIHYCVKYRKRIIFPSTSEVYGMCSDKYF---- 58
Query: 156 PLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNW 215
ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW
Sbjct: 59 -----------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNW 107
Query: 216 IGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLM 275
+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I+D IEA+ +
Sbjct: 108 MGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRI 164
Query: 276 IENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFY 331
IEN R +G I N+GNP NE ++ +L EM+ + K P V S +Y
Sbjct: 165 IENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHF-PPFAGFRVVESSSYY 223
Query: 332 GEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
G+GY D + R P + + L W PK + + ++ TL + RT
Sbjct: 224 GKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFLRT 266
>gi|408389113|gb|EKJ68600.1| hypothetical protein FPSE_11221 [Fusarium pseudograminearum CS3096]
Length = 335
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 169/348 (48%), Gaps = 66/348 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GF+G HL +IL T K+ +D+ DR
Sbjct: 40 VFILGINGFVGHHLLGRILKSTNWKVFGIDI-----------------DR---------- 72
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
I TP + PL +F L +V+ +++ KRLI ST
Sbjct: 73 -----------------HPISTPLSFVKSPLRVFEVDFEANLKIVRLAAKHKKRLIFPST 115
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG + D + + S I G I K RW Y+C+KQL++R+I+
Sbjct: 116 SEVYG------------MCHDDEF---DTEESQLICGPIHKSRWIYSCSKQLLDRVIFGY 160
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
GAE GL+FTI RPFNWIG +D +D S RV F N++R + + LVDGG +
Sbjct: 161 GAE-GLDFTIFRPFNWIGSGLD---SVDNNSLAGSRVTTRFLGNIIRGEDMILVDGGSQR 216
Query: 260 RTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS--GEA 316
R F YI D I+A++ +I N + A+G I+N+GNP N+ ++R LA +M + + E+
Sbjct: 217 RVFTYIDDGIDALMKIIANDSNIASGKIYNIGNPANDYSIRDLATLMLDTAKTMEEFKES 276
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+ D +S FYGEGY D R+P +T + LGW+P ++ D +
Sbjct: 277 VAKVKLTDGNSATFYGEGYQDVQHRVPKITNACEDLGWSPSVTMGDAI 324
>gi|297518006|ref|ZP_06936392.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli OP50]
Length = 269
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 149/280 (53%), Gaps = 23/280 (8%)
Query: 99 ICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLR 158
I TP +Y PL +F + L +++YC + KR+I ST EVYG +
Sbjct: 1 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYF------- 53
Query: 159 QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGP 218
ED S I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GP
Sbjct: 54 --------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGP 105
Query: 219 RMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN 278
R+D ++ G R + NL+ P+KL+DGG+ +R F I+D IEA+ +IEN
Sbjct: 106 RLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIEN 162
Query: 279 PA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEG 334
R +G I N+GNP NE ++ +L EM+ + K P V S +YG+G
Sbjct: 163 AGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHF-PPFAGFRVVESSSYYGKG 221
Query: 335 YDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
Y D + R P + ++ L W PK + + ++ TL + RT
Sbjct: 222 YQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 261
>gi|215809517|gb|ACJ70465.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809521|gb|ACJ70467.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809525|gb|ACJ70469.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809529|gb|ACJ70471.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809533|gb|ACJ70473.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809537|gb|ACJ70475.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|215809539|gb|ACJ70476.1| putative UPD-apiose/xylose synthase [Pinus sylvestris]
gi|219881183|gb|ACL51794.1| putative UDP-apiose/xylose synthase [Pinus nigra]
gi|219881185|gb|ACL51795.1| putative UDP-apiose/xylose synthase [Pinus pinaster]
gi|219881189|gb|ACL51797.1| putative UDP-apiose/xylose synthase [Pseudotsuga menziesii]
Length = 89
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/89 (93%), Positives = 87/89 (97%)
Query: 188 AKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247
AKQLIER+IYAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSN LLR
Sbjct: 1 AKQLIERVIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNGLLRG 60
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMI 276
+PLKLVDGGQSQRTF+YIKDAIEAVLLMI
Sbjct: 61 EPLKLVDGGQSQRTFLYIKDAIEAVLLMI 89
>gi|219881177|gb|ACL51791.1| putative UDP-apiose/xylose synthase [Pinus lambertiana]
gi|219881179|gb|ACL51792.1| putative UDP-apiose/xylose synthase [Pinus strobiformis]
gi|219881181|gb|ACL51793.1| putative UDP-apiose/xylose synthase [Pinus peuce]
Length = 89
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/89 (92%), Positives = 86/89 (96%)
Query: 188 AKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247
AKQLIER+IYAEGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSN LLR
Sbjct: 1 AKQLIERIIYAEGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNGLLRG 60
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMI 276
+PLKLVDGGQSQRTF+YIKDAIEAV LMI
Sbjct: 61 EPLKLVDGGQSQRTFLYIKDAIEAVHLMI 89
>gi|210077761|gb|ACJ07069.1| putative bifunctional polymyxin resistance arnA protein [Secale
cereale]
Length = 98
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/98 (84%), Positives = 90/98 (91%)
Query: 45 ILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPAD 104
+LA+DVY DKI+HL++P A RI FHRLNIK+DSRLEGLIKMADLTINLAAICTPAD
Sbjct: 1 VLAVDVYCDKIRHLVDPPPPHLAGRISFHRLNIKNDSRLEGLIKMADLTINLAAICTPAD 60
Query: 105 YNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEV 142
YNTRPLDTIYSNFIDALPVVKYCSEN+KRLIHFSTCEV
Sbjct: 61 YNTRPLDTIYSNFIDALPVVKYCSENSKRLIHFSTCEV 98
>gi|32490909|ref|NP_871163.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|81741800|sp|Q8D341.1|ARNA_WIGBR RecName: Full=Bifunctional polymyxin resistance protein ArnA;
Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose
formyltransferase; AltName: Full=ArnAFT; AltName:
Full=UDP-L-Ara4N formyltransferase; Includes: RecName:
Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic
acid decarboxylating; AltName: Full=ArnADH; AltName:
Full=UDP-GlcUA decarboxylase; AltName:
Full=UDP-glucuronic acid dehydrogenase
gi|25166115|dbj|BAC24306.1| b2255 [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 654
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 183/362 (50%), Gaps = 42/362 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
I ++G GFIG H+ +L +KI +D+ N+ +K + G ++ F + +IK
Sbjct: 317 ILILGVNGFIGYHITNLLLKYNNYKIYGIDIKNNLVKSFI------GNEKFCFIKGDIKQ 370
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ + ++ IK D+ + L AI P Y PL +F + L +++YC + KR+I S
Sbjct: 371 YYNWVKKKIKKCDIILPLIAIARPMQYIKNPLKVFKIDFEENLKIIRYCVKYKKRIIFPS 430
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG + KD E+ S + G+I+ QRW Y+ +KQL++R+I+A
Sbjct: 431 TSEVYG------MCKDD---------YFDEENSNLVTGAIKNQRWIYSSSKQLLDRIIWA 475
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G +N L FTI RPFNWIGP +D + RV NL+ P+ +V+ G
Sbjct: 476 YGVKNNLNFTIFRPFNWIGPGLD---DFKIAEKQNARVTTQIIFNLINGLPVTIVNNGNQ 532
Query: 259 QRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV--------- 308
+R F I D IEA+ ++ + N I N+GNPHNE T+ QL +++ +
Sbjct: 533 KRCFTDIDDGIEALFEIIKNKNNKCNKKIINIGNPHNEYTIMQLTKIIINIIYSNNRNYN 592
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
+ K SG L S +YGEGY D D+R P++ I + L W PKT + L +
Sbjct: 593 FPKFSGFNML-------SGTNYYGEGYQDIDRRKPNIDIAKKLLNWTPKTKIRITLRKII 645
Query: 369 TY 370
+
Sbjct: 646 NF 647
>gi|406903306|gb|EKD45429.1| NAD-dependent epimerase/dehydratase family protein [uncultured
bacterium]
Length = 214
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 129/206 (62%), Gaps = 6/206 (2%)
Query: 168 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGID 227
E+ SP + G I K+RW Y+C+KQL++R+IYA G + L FT+ RPFNWIGP D I +
Sbjct: 9 EETSPLMQGPINKERWIYSCSKQLLDRIIYAYGKRDNLRFTLFRPFNWIGPTQDDIH--N 66
Query: 228 GPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHI 286
P GV RV+ F +N+ + ++LVDGG+ +R+FI+I D IEA+ +IEN +G I
Sbjct: 67 TPPGGV-RVITQFISNIFYGKDIQLVDGGKQKRSFIFIDDGIEALFKIIENKNNCTDGKI 125
Query: 287 FNVGNPHNEVTVRQLAEMMTEVYAKV-SGEAALEE-PTVDVSSKEFYGEGYDDSDKRIPD 344
FN+GNP N ++ ++A + E+ + L++ V+ SK++YG GY D + R+P
Sbjct: 126 FNIGNPKNNASIGEIAHKIFELAKNYPKHKTTLKKIKIVNTPSKKYYGSGYQDVEHRVPS 185
Query: 345 MTIINQQLGWNPKTSLWDLLESTLTY 370
+ + L W PKT+L + L+ T+ Y
Sbjct: 186 IKRAQETLNWAPKTTLDEALQKTVEY 211
>gi|388518375|gb|AFK47249.1| unknown [Lotus japonicus]
Length = 86
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/86 (88%), Positives = 82/86 (95%)
Query: 304 MMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDL 363
MMT+VY+KVS EA LE P +DVSSKEFYGEGYDDSDKRIPDMTIIN+QLGWNPKTSLWDL
Sbjct: 1 MMTKVYSKVSEEAPLENPAIDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDL 60
Query: 364 LESTLTYQHRTYAEAIKQAVAKPVAS 389
LESTLTYQHRTYAEAIK+A+AKPVAS
Sbjct: 61 LESTLTYQHRTYAEAIKKAIAKPVAS 86
>gi|219881187|gb|ACL51796.1| putative UDP-apiose/xylose synthase [Pinus ponderosa]
Length = 78
Score = 162 bits (410), Expect = 3e-37, Method: Composition-based stats.
Identities = 73/78 (93%), Positives = 76/78 (97%)
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
EGAENGLEFTIVRPFNWIGPRMDFIPG+DGPSEGVPRVLACFSN LLR +PLKLVDGGQS
Sbjct: 1 EGAENGLEFTIVRPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNGLLRGEPLKLVDGGQS 60
Query: 259 QRTFIYIKDAIEAVLLMI 276
QRTF+YIKDAIEAVLLMI
Sbjct: 61 QRTFLYIKDAIEAVLLMI 78
>gi|422661929|ref|ZP_16724052.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Pseudomonas syringae pv.
aptata str. DSM 50252]
gi|330982929|gb|EGH81032.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 278
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 148/280 (52%), Gaps = 40/280 (14%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 29 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 88
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 89 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 135
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG QD + ED S
Sbjct: 136 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYGMC------------QDANF---NEDTSN 180
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG 232
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G
Sbjct: 181 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD---RLDSARIG 236
Query: 233 VPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAV 272
R + +L+ P++LVDGG +R F + D IEA+
Sbjct: 237 SSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEAL 276
>gi|289804594|ref|ZP_06535223.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 247
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 140/259 (54%), Gaps = 25/259 (9%)
Query: 121 LPVVKYCSENNKRLIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE 179
+ +++YC + KR++ ST EVYG T SF ED S I G +
Sbjct: 1 MRIIRYCVKYRKRVVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVN 44
Query: 180 KQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R +
Sbjct: 45 KPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQ 101
Query: 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTV 298
NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++
Sbjct: 102 LILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASI 161
Query: 299 RQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWN 355
++LA ++ + + K P V S+ +YG+GY D R P + + L W
Sbjct: 162 QELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWE 220
Query: 356 PKTSLWDLLESTLTYQHRT 374
P ++ D +E TL + R+
Sbjct: 221 PSIAMRDTVEETLDFFLRS 239
>gi|302341858|ref|YP_003806387.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM
2075]
gi|301638471|gb|ADK83793.1| NAD-dependent epimerase/dehydratase [Desulfarculus baarsii DSM
2075]
Length = 322
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 180/359 (50%), Gaps = 42/359 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYND-KIKHLLEPESQTGADRIQFHRLNIK 78
I + G G IGS +CE L++ H+++ALD + K++HL E TG R +F + +I
Sbjct: 4 ILVTGGAGSIGSFVCE-YLIDRGHEVIALDNGSSRKVEHLFE----TG--RFKFVQDSIM 56
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ LE ++ +D+ I+LAAI P Y T PL+ + N ++ +++ C+ ++I S
Sbjct: 57 NKDVLERQVQRSDIVIHLAAIADPKRYVTEPLNVLNINVKGSIQLLELCAAKGAKVIFAS 116
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EV G+ Q P E+A + G RW Y+ K LIE +YA
Sbjct: 117 TSEVPGRNT-----------QVP----FNEEADR-VLGPPSINRWCYSTGKALIEHFLYA 160
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+ L F I+R FN GPR D + G RV+ F LL QPL + G+
Sbjct: 161 YRQQENLPFVIMRFFNVYGPRCDDL--------GQGRVIPIFMEKLLGGQPLTIHGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F +I+DA +AV+ + NPA A G FNVGN E ++ +LA+ + +V
Sbjct: 213 TRCFTFIEDACQAVVELALNPA-AEGLCFNVGN-DRETSILELAQTLIKV-------GQF 263
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377
E V E +G+ Y+D +RIPD+ I + W TSL D L T+ + +R +A+
Sbjct: 264 ESDIVFKPHVEVFGKSYEDIPRRIPDVRRIKSVINWEASTSLEDGLRKTIDF-YRDWAK 321
>gi|82777664|ref|YP_404013.1| transformylase, partial [Shigella dysenteriae Sd197]
gi|309785044|ref|ZP_07679677.1| bifunctional polymyxin resistance protein arnA [Shigella
dysenteriae 1617]
gi|81241812|gb|ABB62522.1| putative transformylase [Shigella dysenteriae Sd197]
gi|308927414|gb|EFP72888.1| bifunctional polymyxin resistance protein arnA [Shigella
dysenteriae 1617]
Length = 544
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 133/253 (52%), Gaps = 29/253 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK- 78
+ ++G GFIG+HL E++L E +++ LD+ +D I L + FH +
Sbjct: 318 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL--------NHPHFHFVEGDI 369
Query: 79 --HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
H +E +K D+ + L AI TP +Y PL +F + L +++YC + KR+I
Sbjct: 370 SIHSEWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIF 429
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG + ED S I G + K RW Y+ +KQL++R+I
Sbjct: 430 PSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 474
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG
Sbjct: 475 WAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGG 531
Query: 257 QSQRTFIYIKDAI 269
+ +R F I+D I
Sbjct: 532 KQKRCFTDIRDGI 544
>gi|213027939|ref|ZP_03342386.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 240
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 133/248 (53%), Gaps = 25/248 (10%)
Query: 132 KRLIHFSTCEVYGK-TIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
KR++ ST EVYG T SF ED S I G + K RW Y+ +KQ
Sbjct: 5 KRVVFPSTSEVYGMCTDASF----------------DEDKSNLIVGPVNKPRWIYSVSKQ 48
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
L++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+
Sbjct: 49 LLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPI 105
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + +
Sbjct: 106 KLIDGGQQKRCFTDIRDGIEALFRIIVNEGDRCDGKIINIGNPDNEASIQELATLLLDSF 165
Query: 310 AKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
K P V S+ +YG+GY D R P + + L W P ++ D +E
Sbjct: 166 DKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAMRDTVEE 224
Query: 367 TLTYQHRT 374
TL + R+
Sbjct: 225 TLDFFLRS 232
>gi|302768331|ref|XP_002967585.1| hypothetical protein SELMODRAFT_408703 [Selaginella moellendorffii]
gi|300164323|gb|EFJ30932.1| hypothetical protein SELMODRAFT_408703 [Selaginella moellendorffii]
Length = 509
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 106/174 (60%), Gaps = 25/174 (14%)
Query: 216 IGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLM 275
+G R PG G ++ ++NLL+ +P+KLVDGGQSQRTF+Y+KDAI+ V+ M
Sbjct: 81 LGHRWILFPGSMGQAKAYKEFW--LASNLLKSEPMKLVDGGQSQRTFVYVKDAIDTVMRM 138
Query: 276 IENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGY 335
V R + VSG L+EPT+D+SSKEFYGEGY
Sbjct: 139 --------------------VFPRLYLRTSYWCHTGVSGRPQLDEPTIDMSSKEFYGEGY 178
Query: 336 DDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQAVAKPVAS 389
DDSDKRIPDMTII +QL W P L+DLLESTLTYQH+TYA A+++ A +S
Sbjct: 179 DDSDKRIPDMTIIKKQLEWEP---LFDLLESTLTYQHKTYARAMQKPAASGTSS 229
>gi|438043987|ref|ZP_20855922.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435320616|gb|ELO93184.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
Length = 210
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 118/205 (57%), Gaps = 8/205 (3%)
Query: 174 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233
I G + K RW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G
Sbjct: 2 IVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGS 58
Query: 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNP 292
R + NL+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP
Sbjct: 59 SRAITQLILNLVEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNP 118
Query: 293 HNEVTVRQLAEMMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIIN 349
NE ++++LA ++ + + K P V S+ +YG+GY D R P +
Sbjct: 119 DNEASIQELATLLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNAR 177
Query: 350 QQLGWNPKTSLWDLLESTLTYQHRT 374
+ LGW P ++ D +E TL + R+
Sbjct: 178 RCLGWEPSIAMRDTVEETLDFFLRS 202
>gi|417724189|ref|ZP_12372993.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-304]
gi|333016484|gb|EGK35815.1| bifunctional polymyxin resistance protein arnA [Shigella flexneri
K-304]
Length = 471
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 127/252 (50%), Gaps = 39/252 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK--------HLLEPESQTGADRIQ 71
+ ++G GFIG+HL E++L E +++ LD+ +D I H +E + ++ I+
Sbjct: 174 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIE 233
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
+H +K D+ + L AI TP +Y PL +F + L +++YC +
Sbjct: 234 YH-------------VKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR 280
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
KR+I ST EVYG + ED S I G + K RW Y+ +KQL
Sbjct: 281 KRIIFPSTSEVYGMCSDKYF---------------DEDHSNLIVGPVNKPRWIYSVSKQL 325
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL+FT+ PFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 326 LDRVIWAYGEKEGLQFTLFLPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIK 382
Query: 252 LVDGGQSQRTFI 263
L+DGG +
Sbjct: 383 LIDGGNKNAALL 394
>gi|428213868|ref|YP_007087012.1| nucleoside-diphosphate-sugar epimerase [Oscillatoria acuminata PCC
6304]
gi|428002249|gb|AFY83092.1| nucleoside-diphosphate-sugar epimerase [Oscillatoria acuminata PCC
6304]
Length = 344
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 170/356 (47%), Gaps = 44/356 (12%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFH- 73
T + G GFIGSHL E LL + +D + D I+HLL DR FH
Sbjct: 13 TYLITGGAGFIGSHLAEA-LLAKGSLVRVIDNLSTGSIDNIRHLL--------DRPDFHF 63
Query: 74 -RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
+I +D L+ L AD+ I+LAA P+ TI +N + V++
Sbjct: 64 AYADITNDMVLDRLASEADIIIHLAAAVGVKLVVENPVQTIKTNIMGTEKVLETAHRYRA 123
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
+++ ST EVYGK P R+D + G + RW YA +K +
Sbjct: 124 KVVIASTSEVYGKG------HSIPFRED----------DDVVLGPTSRNRWGYAASKMVD 167
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L A E GL I R FN +GPR G+ +PR++ L+ +PL +
Sbjct: 168 EFLALAYYHEKGLPVAIARLFNTVGPRQTGRYGMV-----IPRLI----QQALQGEPLTV 218
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
GQ R F++++DA+ A++ + E+ + A G +FNVG+ E+T+ LA+ + +
Sbjct: 219 YGDGQQSRCFLHVQDAVRALIGLAES-SEAIGEVFNVGS-QQEITILDLAQRIID-RVGT 275
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
+G L E + +S + Y G++D +R PD++ I + +GW P SL ++L+ +
Sbjct: 276 TGNNRLSEIQM-ISYGQAYAPGFEDMQRRFPDLSKIAEYIGWQPTRSLDEILDDAI 330
>gi|148658189|ref|YP_001278394.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1]
gi|148570299|gb|ABQ92444.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1]
Length = 325
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 169/358 (47%), Gaps = 45/358 (12%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
+I + G GFIGSHL + L+E ++ +D + I+HL G +
Sbjct: 5 SILITGGAGFIGSHLADA-LIERGDRVAIIDDLSTGAVANIRHL------KGHPNFSYTL 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I +++ L LI +D ++LAA P+ TI +N V+++ ++ K +
Sbjct: 58 DTIANEAVLAELIDESDAVVHLAAAVGVQLIVQSPVRTIETNVNGTELVLRWAAKKGKTV 117
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYGK+ + +P R+D + G RWSYAC+K L E
Sbjct: 118 LIASTSEVYGKS------ERAPFRED----------DDLVLGPSTINRWSYACSKLLDEF 161
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L A E L I R FN +GPR G+ VPR F LR PL++
Sbjct: 162 LALAYHKERDLPVIIARLFNTVGPRQTGRYGM-----VVPR----FVRAALRNVPLRVYG 212
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GQ R F Y+ D + A++ ++++P A G +FNVGNP EV++ +LA+ + +
Sbjct: 213 DGQQTRCFCYVGDTVRALIALLDHP-DAVGKVFNVGNPQ-EVSILELAQRVVRL------ 264
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
A P V V + Y G++D +R+PD++ + G+ P L D++ + + Y+
Sbjct: 265 -AQSSSPIVLVPYEHAYEAGFEDMRRRVPDISRLTALTGFRPTLDLDDIIRTVIEYEQ 321
>gi|289671630|ref|ZP_06492520.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 276
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 124/229 (54%), Gaps = 37/229 (16%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIK---- 56
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+
Sbjct: 63 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRA 122
Query: 57 ----HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDT 112
H +E + + I++H IK D+ + L AI TP +Y PL
Sbjct: 123 KPNFHFIEGDISIHTEWIEYH-------------IKKCDVVLPLVAIATPIEYTRNPLRV 169
Query: 113 IYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASP 172
+F + L +V+YC + NKR+I ST EVYG + QD + ED S
Sbjct: 170 FELDFEENLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSN 214
Query: 173 CIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221
I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D
Sbjct: 215 LIVGPINKQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD 262
>gi|156743594|ref|YP_001433723.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM
13941]
gi|156234922|gb|ABU59705.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM
13941]
Length = 325
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 164/357 (45%), Gaps = 43/357 (12%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND---KIKHLLEPESQTGADRIQFHRL 75
+I + G GFIGSHL + ++ + D+ I+HL G +
Sbjct: 5 SILITGGAGFIGSHLADALIARGDRVAIIDDLSTGAVANIRHL------KGHPNFSYTLD 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I +++ L LI +D ++LAA P+ TI +N V+++ ++ K ++
Sbjct: 59 TIANEAVLAELIDESDAIVHLAAAVGVQLIVQSPVRTIETNVNGTELVLRWAAKKGKTVL 118
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYGK+ + P R+D + G RWSYAC+K L E L
Sbjct: 119 LASTSEVYGKS------ERIPFRED----------DDLVLGPSTMGRWSYACSKLLDEFL 162
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A E L I R FN +GPR G+ VL F LR PL++
Sbjct: 163 ALAYHKERDLPVIIARLFNTVGPRQTGRYGM---------VLPRFVRAALRDVPLRVYGD 213
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
GQ R F Y+ D + A++ ++++P A G IFNVGNP EV++ +LA+ + +
Sbjct: 214 GQQTRCFCYVGDTVRALIALLDHPG-AVGKIFNVGNPQ-EVSILELAQRVVRL------- 264
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
A P V V + Y G++D +R+PD++ + G+ P L D++ + + Y+
Sbjct: 265 ARSSSPIVLVPYEHAYEAGFEDMRRRVPDISRLAALTGFRPTLDLDDIIRAVIAYEQ 321
>gi|302188658|ref|ZP_07265331.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Pseudomonas syringae pv. syringae
642]
Length = 513
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 122/222 (54%), Gaps = 23/222 (10%)
Query: 1 MAGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLE 60
+AG+ + R ++ + ++G GFIG+HL E++L + ++I +D+ +D I+ L
Sbjct: 303 VAGSQLLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERL-- 360
Query: 61 PESQTGADRIQFHRLNIK-HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFID 119
F +I H +E IK D+ + L AI TP +Y PL +F +
Sbjct: 361 ----RAKPNFHFIEGDISIHTEWIEYQIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEE 416
Query: 120 ALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE 179
L +V+YC + NKR+I ST EVYG + QD + ED S I G I
Sbjct: 417 NLKIVRYCVKYNKRVIFPSTSEVYG------------MCQDANF---NEDTSNLIVGPIN 461
Query: 180 KQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMD 221
KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D
Sbjct: 462 KQRWIYSVSKQLLDRVIWAYG-QKGLQFTLFRPFNWMGPRLD 502
>gi|383762484|ref|YP_005441466.1| putative UDP-glucuronate decarboxylase [Caldilinea aerophila DSM
14535 = NBRC 104270]
gi|381382752|dbj|BAL99568.1| putative UDP-glucuronate decarboxylase [Caldilinea aerophila DSM
14535 = NBRC 104270]
Length = 337
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 160/352 (45%), Gaps = 36/352 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHL + LLE ++ LD N + + F ++++
Sbjct: 3 VLITGGAGFIGSHLT-RALLERGDRVSVLD--NLSTGNFENIRAFAHHPLYSFAIDDVRN 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
L+ L AD ++LAA RP +TI +N + V+ R + ST
Sbjct: 60 ALVLDRLASEADAIVHLAAAVGVQLVVERPTETIETNVLGTHAVLAAARRYRCRTLLAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + + ++ L + G + RWSYA +K L E L A
Sbjct: 120 SEVYGKGVKAPFSEEDDL----------------LLGPSSRSRWSYAASKLLDEFLGLAA 163
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
E GL TI R FN +GP G+ VPR F LR +PL + G
Sbjct: 164 YREFGLPVTIARFFNTVGPGQTGRYGMV-----VPR----FVQAALRDEPLTVYGDGTQS 214
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F +++D + A++ +++ P G I+N+G+ H EVT+ +LA+ + E S
Sbjct: 215 RCFCHVRDTVRAIVELLDRPEITAGEIYNIGSSH-EVTINELAQTVIERTDSRS------ 267
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
P + E Y G++D +R+PD+T I +GW PK +L +L+ + Y+
Sbjct: 268 -PIQYIPYNEAYAPGFEDMQRRVPDITKICNAIGWTPKYTLTQILDDVIEYE 318
>gi|188586200|ref|YP_001917745.1| NAD-dependent epimerase/dehydratase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350887|gb|ACB85157.1| NAD-dependent epimerase/dehydratase [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 321
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 165/350 (47%), Gaps = 39/350 (11%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
+ GA GFIGSHLC++ L+ +K+ LD + KI+ L E E QF I D
Sbjct: 5 VTGAAGFIGSHLCKE-LVTRGNKVWGLDNLSQGKIERLQELEDHPD---FQFIDSCISDD 60
Query: 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140
LE LI D+ ++AA+ Y +P I N + + + +K++I ST
Sbjct: 61 EVLEELINKVDIIYHMAAVVGVKRYVEKPERVIDVNVRFTSRLFELAYQLDKKVIFASTS 120
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
EVYGK P +D I+G RWSYA +K E L
Sbjct: 121 EVYGKN------NSIPFSED----------DNRIYGPSTTDRWSYAISKSAAEHLCLGY- 163
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ GL+ I+R FN GP D + V+ F N LL +P+ + + G R
Sbjct: 164 VKKGLKAVIIRYFNVYGPYAD--------TSAYGGVVTRFVNQLLTNKPMTVHNDGSQTR 215
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F YI D I+ + P A G +FN+G+ H E ++ +LAE + +V + ++G+ +
Sbjct: 216 CFTYIDDIIKGTIEAGSRP-EAEGKVFNLGH-HRETSILELAETILKV-SGINGDIVFQ- 271
Query: 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
KEFYG Y+D +R+PD++ + L ++P+ +L D L+ TL +
Sbjct: 272 -----PYKEFYGNSYEDITRRVPDLSEARKILDYDPEITLEDGLKKTLNW 316
>gi|416663295|ref|ZP_11816151.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323209736|gb|EFZ94660.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
Length = 199
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 111/194 (57%), Gaps = 8/194 (4%)
Query: 185 YACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL
Sbjct: 2 YSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNL 58
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAE 303
+ P+KL+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA
Sbjct: 59 VEGTPIKLIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELAT 118
Query: 304 MMTEVYAKVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
++ + + K P V S+ +YG+GY D R P + + L W P ++
Sbjct: 119 LLLDSFDKHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLDWEPSIAM 177
Query: 361 WDLLESTLTYQHRT 374
D +E TL + R+
Sbjct: 178 RDTVEETLDFFLRS 191
>gi|83320237|gb|ABC02802.1| putative UDP-glucose 4-epimerase [Actinomadura melliaura]
Length = 329
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 44/355 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GF+GSHL E+ L E +++ D + EP D +++ +I+
Sbjct: 5 VVVTGGSGFVGSHLVER-LAEQGREVVVYDAAAPPKDQVREP------DLVRYVTGDIRD 57
Query: 80 DSRLEGLIK-MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
RL +I ++ +LAA+ Y RPLD I F V+ +++ S
Sbjct: 58 ADRLAEVITPEVEVVYHLAAVVGVDTYLGRPLDVIDVAFGGTKAVLGQACRTGAKVVMVS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T E+YGK +P KEDA + GS RWSY+ +K L E L +A
Sbjct: 118 TSEIYGKN--EVVP-------------WKEDADR-VLGSTATDRWSYSSSKALAEHLTFA 161
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
++GL TI+R FN GPR P+ V R + + LR P + D G+
Sbjct: 162 YMRQHGLRATILRYFNVYGPRQR-------PAYLVSRTV----HRALRGLPPVVYDDGRQ 210
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+E +L E+P +A+G FN+G+ + E+ + ++ EM+ E+ ++
Sbjct: 211 TRCFTYVADAVEGTILAGESP-KADGECFNLGSTY-EMPIGRVIEMVGELAGGLA----- 263
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
TV V + + G Y D +R+PD + LGW T L L + + + R
Sbjct: 264 --QTVTVETDQVLGNRYQDMRRRVPDASKALATLGWRASTPLAKGLAAVIRWGRR 316
>gi|116249598|ref|YP_765436.1| putative epimerase [Rhizobium leguminosarum bv. viciae 3841]
gi|115254246|emb|CAK03861.1| putative epimerase [Rhizobium leguminosarum bv. viciae 3841]
Length = 347
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 161/357 (45%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 IMVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEVL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F LR +P+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALRNEPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G+ R+F Y+ D I+ + ++ PA G I N+GNP E VR+LAEM+ E+ S
Sbjct: 207 GNGRQTRSFCYVDDLIDGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVVEMTGSKS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
G + P DD +R PD++ QQLGW PK +L + LE T+ Y
Sbjct: 265 GIVFKDLPV-------------DDPTQRKPDISRATQQLGWQPKVNLREGLERTIAY 308
>gi|424875846|ref|ZP_18299505.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393163449|gb|EJC63502.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 347
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 161/357 (45%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 IMVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEVL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F LR +P+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALRNEPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G+ R+F Y+ D I+ + ++ PA G I N+GNP E VR+LAEM+ E+ S
Sbjct: 207 GNGRQTRSFCYVDDLIDGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVVEMTGSKS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
G + P DD +R PD++ QQLGW PK +L + LE T+ Y
Sbjct: 265 GIVFKDLPV-------------DDPTQRKPDISRATQQLGWQPKVNLREGLERTIAY 308
>gi|402849860|ref|ZP_10898081.1| dTDP-glucose 4,6-dehydratase [Rhodovulum sp. PH10]
gi|402499852|gb|EJW11543.1| dTDP-glucose 4,6-dehydratase [Rhodovulum sp. PH10]
Length = 318
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 107/353 (30%), Positives = 162/353 (45%), Gaps = 53/353 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GGF+GSHLC++ LL H+IL LD K +E R +F ++H
Sbjct: 11 ILVTGGGGFLGSHLCDR-LLGKGHEILCLDNLFTGTKRNIE--HLHAEPRFEF----LRH 63
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +++ D NLA +P Y P+ T ++ A+ ++ ++ ST
Sbjct: 64 DVTFPLYVEV-DEIYNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRLKCPILQAST 122
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG DP+ + ED +G++ R Y K+ E L +
Sbjct: 123 SEVYG---------------DPSVHPQTED----YWGNVNPIGMRACYDEGKRCAETLFF 163
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++GLE +VR FN GPRM PS+G RV++ F LRR+P+ + GQ
Sbjct: 164 DYHRQHGLEIKVVRIFNTYGPRMH-------PSDG--RVVSNFIMQALRREPITIYGNGQ 214
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D IE ++ M+E+ G + N+GNP N T+ +LAE + SG
Sbjct: 215 QTRSFCYVDDLIEGMIRMMESSPDFVGPV-NIGNP-NAFTITELAEQVVAQCGSASGLRY 272
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L P DD +R PD+++ +LGW P+ L D L T+ Y
Sbjct: 273 LPLPV-------------DDPKQRQPDISLARSKLGWEPEIQLRDGLAKTIEY 312
>gi|430747106|ref|YP_007206235.1| nucleoside-diphosphate-sugar epimerase [Singulisphaera acidiphila
DSM 18658]
gi|430018826|gb|AGA30540.1| nucleoside-diphosphate-sugar epimerase [Singulisphaera acidiphila
DSM 18658]
Length = 336
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 172/359 (47%), Gaps = 48/359 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLL-EPESQTGADRIQFHR 74
+ + G GFIGSHLCE LE ++L LD + + I+HL P D + H
Sbjct: 3 VLITGGAGFIGSHLCEA-YLERGDEVLVLDDLSTGSIENIRHLRGHPHFHYTVDSVHNHP 61
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+ + L+ D+ ++LAA P+ TI +N V+ + ++ K++
Sbjct: 62 I-------VAELVDQCDVIVHLAAAVGVKLIVESPVRTIETNVHGTEVVLAHANKKKKKV 114
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG L P R+D + G+ K RWSYAC+K + E
Sbjct: 115 LIASTSEVYG------LSTQVPFRED----------GNLVMGATNKGRWSYACSKAIDEF 158
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L A E L +VR FN +GPR G+ V+ F L +P+ +
Sbjct: 159 LALAYWREKQLPTVVVRLFNTVGPRQVGQYGM---------VIPTFVKQALAGRPITVYG 209
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R F ++ D + A++ ++++P+ A G ++N+G+ E+++ LA ++ K+SG
Sbjct: 210 DGSQTRCFAHVADVVAALVKLVDHPS-AIGQVYNIGSS-EEISIGALASLIK----KLSG 263
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
+ V + E Y G++D +R+PD++ ++ +G+ P+ +L +LE+ + + HR
Sbjct: 264 STS---EIVHIPYGEAYEAGFEDMPRRVPDVSKLSALIGFRPERTLEAILEAVIAF-HR 318
>gi|72160573|ref|YP_288230.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)
[Thermobifida fusca YX]
gi|71914305|gb|AAZ54207.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)
[Thermobifida fusca YX]
Length = 319
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 163/348 (46%), Gaps = 39/348 (11%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
+ G GFIGSHLC+ L H++ LD + K L A +F +I +
Sbjct: 5 VTGGAGFIGSHLCD-YLTSQGHQVTVLDDLSTGSKENLA--QLAAAPNFEFVEGSILDTA 61
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
++ L+ D +LAA +PL+++ N VV+ + + R++ ST E
Sbjct: 62 LVDKLVGSCDTVFHLAAAVGVHTIVDKPLESLRVNLHGTENVVEAAARHGARIMVASTSE 121
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYGK L +D+ I GS K RWSYA AK L E + Y G
Sbjct: 122 VYGKNDADGLTEDADR----------------ILGSPLKSRWSYAAAKGLDELVAYVYGK 165
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
E G+ IVR FN +GPR G+ VPR F + L +P+ + G +R
Sbjct: 166 ETGIPTVIVRFFNIVGPRQTGRYGMV-----VPR----FVSQALANEPITVYGDGTQRRC 216
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321
F + D + AV+ +++ PA N N+G E+++R LAE + E+ S
Sbjct: 217 FGSVFDVVPAVVKLMDTPAAYN-QAVNLGG-MEEISIRGLAERVIELTGSSS-------- 266
Query: 322 TVD-VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
T++ + ++ YGEGY+D +R+PD ++ + +G+ P L D++ S +
Sbjct: 267 TIEYIPYEKAYGEGYEDMRRRMPDTSLAKKLIGYEPTRRLDDIINSII 314
>gi|159902007|gb|ABX10737.1| dTDP-glucose 4,6-dehydratase [uncultured planctomycete 13FN]
Length = 311
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 162/356 (45%), Gaps = 58/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
T+ + G GF+GSHLC++ L+E +++ LD + D ++HLL G DR + R
Sbjct: 3 TVLVTGGAGFLGSHLCDR-LIERGDEVICLDNFFTGNKDNVRHLL------GHDRFELVR 55
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I H +E AD NLA +P Y P+ TI ++ + + V+ R+
Sbjct: 56 HDIVHPFYIE-----ADRIFNLACPASPEAYQHNPIKTIKTSTVGMVNVMGLAKRCGARV 110
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+H ST EVYG P+ P +D Y+ P R Y K++ E
Sbjct: 111 LHASTSEVYGD------PQVHPQTED--YWGHVNPIGP---------RSCYDEGKRIAES 153
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L+ + ++ I+R FN GPRMD P++G RV++ F N LR +PL +
Sbjct: 154 LMMNYHEAHDVQIRIIRIFNTYGPRMD-------PNDG--RVISNFINQALRGEPLTIYG 204
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y D IE +L +++ N+GNP E T+ +LAE + S
Sbjct: 205 EGTQTRSFCYCSDLIEGMLRLMDQDDHTGP--VNIGNP-TENTMLELAEAVIAAVGSSST 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A L P DD +R PD+T+ Q L W P+ L L +T+ +
Sbjct: 262 IAQLPLPK-------------DDPQRRCPDITLAKQWLDWTPQVDLQQGLGNTIEW 304
>gi|46580859|ref|YP_011667.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601831|ref|YP_966231.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4]
gi|387154114|ref|YP_005703050.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris RCH1]
gi|46450279|gb|AAS96927.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|120562060|gb|ABM27804.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris DP4]
gi|311234558|gb|ADP87412.1| NAD-dependent epimerase/dehydratase [Desulfovibrio vulgaris RCH1]
Length = 316
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 169/357 (47%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLC++ LL+ H++L +D Y ++HLLE R +
Sbjct: 7 VLVTGGAGFVGSHLCDR-LLKDGHEVLCVDNYFTGARANVEHLLENR------RFEL--- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ TI + A+ ++ R+
Sbjct: 57 -VRHDITFPLYVEV-DEIWNLACPASPVHYQHDPVQTIKTCVHGAINMLGLAKRVGARIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + E+ +G+++ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAEHPQTEN----YWGNVDPIGIRSCYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L +A +NGL+ + R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 156 ALFFAYHRQNGLDIRVGRLFNTYGPRMH-------PNDG--RVVSNFIMQALRNEPITIY 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F YI D IE ++ ++ P +G + N+GNP E T+R+LAE + ++ S
Sbjct: 207 GDGSQTRSFCYIHDLIECMIRFMDLPPGLHGPV-NIGNP-AEFTIRELAETVIDLVGSRS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A L P+ D +R PD++ + ++LGW P+T L + L T+ Y
Sbjct: 265 TIAHLPLPS-------------GDPRQRRPDISTVREKLGWEPQTQLREGLRHTIAY 308
>gi|297564307|ref|YP_003683280.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848756|gb|ADH70774.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 327
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 41/362 (11%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ G GFIGSHLC+ L+ H++ LD + + +L++ + G +F ++
Sbjct: 4 VVTGGAGFIGSHLCDH-LIARGHQVTVLDDLSTGTLANLVQAQGSPG---FRFVEGDVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
++ L+ AD +LAA + PL ++ N VV+ + + ST
Sbjct: 60 RELVDSLVAPADAVFHLAAAVGVYNIVDNPLRSLRINLHGTENVVEAAVAHRVPYMVAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK L ++ ++G K RWSYA AK L E + Y +
Sbjct: 120 SEVYGKNDADGL----------------KEGDDRVYGPATKSRWSYAAAKGLDELVAYVQ 163
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
G E+G+ I R FN +GPR G+ VPR F + L +P+ + G +
Sbjct: 164 GVESGVPCVITRFFNVVGPRQTGRYGMV-----VPR----FVDQALADEPITVYGTGTQR 214
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F + D + A+L +++ P N N+G H EV+++ LA+ + E+ A
Sbjct: 215 RCFGSVFDVVPALLRLMDTPEAYN-QAVNLGG-HEEVSIKGLADRVVEL-------AGSR 265
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 379
V +E YGEGY+D +R PD ++ + +G+ P+ L D++ S + +HR ++
Sbjct: 266 SAITYVDYEEAYGEGYEDMQRRYPDTSLAARLIGYRPERDLNDIIRSIM--EHRRAVGSV 323
Query: 380 KQ 381
Q
Sbjct: 324 PQ 325
>gi|86356998|ref|YP_468890.1| dTDP-glucose 4,6-dehydratase [Rhizobium etli CFN 42]
gi|86281100|gb|ABC90163.1| probable dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CFN
42]
Length = 362
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 159/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +L +D + D + HLL D +F L
Sbjct: 22 IMVTGGTGFLGSFLCERLLREG-NDVLCVDNFYTGSRDNVLHLL--------DDPRFEIL 72
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 73 --RHDITFPLYVEI-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIF 129
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG DPA + E+ + S R Y K+ E L
Sbjct: 130 QASTSEVYG---------------DPAVHPQPEEYRGSV--SPIGPRACYDEGKRCAETL 172
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ + G+E + R FN GPRM G RV++ F LR +P+ +
Sbjct: 173 FFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALRNEPITIFGD 223
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R+F Y+ D I+ + ++ PA G I N+GNP E VR+LAEM+ E+ SG
Sbjct: 224 GRQTRSFCYVDDLIDGFIRLMAAPAGVTGPI-NLGNP-GEFQVRELAEMVIEMTGSKSGI 281
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD++ QQLGW PK +L + LE T+ Y
Sbjct: 282 VFKALPI-------------DDPTQRKPDISRATQQLGWQPKVNLREGLERTIAY 323
>gi|225180903|ref|ZP_03734351.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT
1]
gi|225168384|gb|EEG77187.1| NAD-dependent epimerase/dehydratase [Dethiobacter alkaliphilus AHT
1]
Length = 325
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 162/353 (45%), Gaps = 38/353 (10%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
+ GA GF+GSHLC +L E D+ + K +++ E G R F I +S
Sbjct: 5 VTGAAGFVGSHLCTSLLSEGNEVWGIDDLSSGKEENI---EHLKGNPRFNFIEGCISDES 61
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
+L LI D+ +LAA+ Y P I N +++ + K+++ ST E
Sbjct: 62 QLIKLIYKVDIIYHLAAVVGVKHYVEDPTRVIDVNVCYTSSLLENAWKLGKKVVFTSTSE 121
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYGK+ + P + ED ++G RW YA +K E L A
Sbjct: 122 VYGKS------ESIPFAE--------EDDR--VYGPASTNRWCYAISKSAGEYLCLGY-A 164
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
+ GL I+R FN GPR D D GV F N L R PL + G R
Sbjct: 165 KQGLPVVILRYFNVYGPRAD-----DSAYGGVA---TRFINQALARTPLTVHGDGAQTRC 216
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321
F YI D ++A + + P A G IFN+G E + +LA+M+ KVSG E
Sbjct: 217 FTYIDDIVKATMEAGKRP-EAEGRIFNLGR-ERETPILELAKMVL----KVSG---TEGE 267
Query: 322 TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT-YQHR 373
V KEFYG Y+D +RIPD++ Q LG+NP +L + + TL Y++R
Sbjct: 268 IVFQPYKEFYGSSYEDIRRRIPDLSAARQILGYNPSVTLEEGIRETLNWYRNR 320
>gi|448358994|ref|ZP_21547666.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
gi|445644282|gb|ELY97299.1| NAD-dependent epimerase/dehydratase [Natrialba chahannaoensis JCM
10990]
Length = 325
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 168/348 (48%), Gaps = 39/348 (11%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
+ G GGFIGSHL + +L ET +I+ LD ++ P + DR++ ++ +
Sbjct: 4 VITGGGGFIGSHLVDAVLRETSERIIILDDFSTG-----SPSNLPNTDRLEIVYGDVCDE 58
Query: 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140
+ + I A+ +LAA PL+++ +N V++ +E++ S+
Sbjct: 59 AVVSECIARAETVYHLAAAVGVEKIANEPLESLQTNLQGTEHVLEAATEHDVPTFIASSS 118
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
EVYGK+ GS V E++ + G E RWSYA AK + E A
Sbjct: 119 EVYGKS-GS---------------VPFEESDNRVLGPTESLRWSYASAKAIDEMFAQAYY 162
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
++GL + R FN +GPR G+ V+ F L +PL + G R
Sbjct: 163 EKHGLPVVVGRYFNIVGPRQTGQYGM---------VIPTFVEQALSGEPLTVYGDGTQTR 213
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
+F +++DA++ +++ +RA+G +FNVG+P N ++ +LAE + E+ S ++ +E
Sbjct: 214 SFTHVRDAVQLTRELLQT-SRAHGDVFNVGSP-NATSINELAERVIEL---TSSDSEIEH 268
Query: 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
V + + E +++ +R P++ + + LGW P+T L +L +
Sbjct: 269 ----VPYQVVFDETFEEPQQREPEVQKLERTLGWYPETDLDSILRDVI 312
>gi|418051484|ref|ZP_12689568.1| dTDP-glucose 4,6-dehydratase [Mycobacterium rhodesiae JS60]
gi|353184176|gb|EHB49703.1| dTDP-glucose 4,6-dehydratase [Mycobacterium rhodesiae JS60]
Length = 334
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 165/352 (46%), Gaps = 39/352 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHL LLE + D + +E +S +F + ++
Sbjct: 4 VVVTGGYGFIGSHLVTA-LLERGDNVTIFDFAKNTRDTSIEFDSHP---NFRFIQGDVTD 59
Query: 80 DSRLE-GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
S LE L D +LAA+ +Y PL + N I V++ N R++ S
Sbjct: 60 LSALEVALTPDVDTVYHLAAVVGVKNYMNDPLQVLDVNVIGTRNVLELSHRNGIRVVFAS 119
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EV+GK + P +D + GS + RWSY+ +K + E L++A
Sbjct: 120 TSEVFGKN------PNPPWAED----------HDRVLGSTKTARWSYSTSKGMAEHLVFA 163
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
A +GL T+VR FN GPR + I + S+ V R+L RQPL L D G
Sbjct: 164 MHAAHGLPVTVVRYFNVYGPRQNPIFVV---SQTVHRILNG-------RQPL-LYDSGDQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+ LL ++ A A G FNVG+ E T+R+ ++ ++ A V G +
Sbjct: 213 TRCFTYVDDAVAGTLLAADSDA-AIGEAFNVGS-MVETTMREAVDLAIKI-AGVEGVSGA 269
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
E V + +G Y+D +RIPD T +QLGW+ K + + + T+ +
Sbjct: 270 EP----VDTAAHFGGRYEDIPRRIPDSTKAQRQLGWHLKVDVEEGIRRTIEW 317
>gi|325107113|ref|YP_004268181.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305]
gi|324967381|gb|ADY58159.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305]
Length = 316
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 171/370 (46%), Gaps = 66/370 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
TI + G GF+GSHLC++ L+E + ++ +D + I HL+ G R +
Sbjct: 5 TILVTGGAGFLGSHLCDR-LIEQGNDVICVDNFFSGSKQNIAHLI------GHPRFEL-- 55
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD + L AD NLA +P Y P+ TI ++ + + V+ + R+
Sbjct: 56 --IRHDI-VRPLFVEADQVYNLACPASPKAYQFNPIKTIKTSTVGMVNVLGLAKRCSSRV 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLI 192
+H ST EVYG DP + E+ +G++ R Y K++
Sbjct: 113 LHTSTSEVYG---------------DPEVHPQVEE----YWGNVNPIGPRSCYDEGKRVA 153
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L +GLE IVR FN GPRM P +G RV++ F LR +PL L
Sbjct: 154 ESLCMNYHLAHGLEVRIVRIFNTYGPRMH-------PDDG--RVVSNFIMQALRGEPLTL 204
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G+ R+F Y+ D ++ ++ M+ N G + N+GNP E ++++LAE + V
Sbjct: 205 YGDGEQTRSFCYVDDLVDGLMRMM-NQEETTGPV-NIGNP-GEFSMKELAEAVLAVTGSS 261
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
S + P DD +R PD+T + LGW PKT L + LE+T+ Y
Sbjct: 262 SDITHVPLPQ-------------DDPKQRCPDITKAKRILGWEPKTQLREGLEATVEY-- 306
Query: 373 RTYAEAIKQA 382
Y E +++
Sbjct: 307 --YREQLQKG 314
>gi|182682149|ref|YP_001830309.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa M23]
gi|386083473|ref|YP_005999755.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|417558147|ref|ZP_12209135.1| Nucleoside-diphosphate-sugar epimerase [Xylella fastidiosa EB92.1]
gi|182632259|gb|ACB93035.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa M23]
gi|307578420|gb|ADN62389.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|338179222|gb|EGO82180.1| Nucleoside-diphosphate-sugar epimerase [Xylella fastidiosa EB92.1]
Length = 314
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 163/357 (45%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCEK L+ + H +L +D + D + +L+ G + +
Sbjct: 8 VLVTGGAGFLGSHLCEK-LVASGHDVLCVDNFYTGSKDSVINLI------GHPKFEL--- 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +++ D NLA +P Y P+ T ++ A+ ++ R++
Sbjct: 58 -IRHDVTFPLYVEV-DRIYNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRVKARIL 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG DP + E +G + R Y K+ E
Sbjct: 116 QASTSEVYG---------------DPEIHPQLE----TYWGRVNPVGIRSCYDEGKRCAE 156
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ LE + R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 157 TLFFDYWRQHKLEIKVTRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEPITIY 207
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D I+ +L M+E+P NG + N+GNP E T+ QLAEM+ ++ +S
Sbjct: 208 GDGTQTRSFCYVDDLIDGMLRMMESPKDFNGPV-NIGNP-TEFTMLQLAEMVLKLVGSIS 265
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ QLGW PK SL D L T+ Y
Sbjct: 266 KIVFQPLP-------------LDDPKQRQPDITLAKSQLGWEPKVSLEDGLRETIAY 309
>gi|71274542|ref|ZP_00650830.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Dixon]
gi|71164274|gb|EAO13988.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Dixon]
gi|71732055|gb|EAO34111.1| NAD-dependent epimerase/dehydratase [Xylella fastidiosa Ann-1]
Length = 314
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 163/357 (45%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCEK L+ + H +L +D + D + +L+ G + +
Sbjct: 8 VLVTGGAGFLGSHLCEK-LVASGHDVLCVDNFYTGSKDSVINLI------GHPKFEL--- 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +++ D NLA +P Y P+ T ++ A+ ++ R++
Sbjct: 58 -IRHDVTFPLYVEV-DRIYNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRVKARIL 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG DP + E +G + R Y K+ E
Sbjct: 116 QASTSEVYG---------------DPEIHPQLE----TYWGRVNPVGIRSCYDEGKRCAE 156
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ LE + R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 157 TLFFDYWRQHKLEIKVTRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEPITIY 207
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D I+ +L M+E+P NG + N+GNP E T+ QLAEM+ ++ +S
Sbjct: 208 GDGTQTRSFCYVDDLIDGMLRMMESPKDFNGPV-NIGNP-TEFTMLQLAEMVLKLVGSIS 265
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ QLGW PK SL D L T+ Y
Sbjct: 266 KIVFQPLP-------------LDDPKQRQPDITLAKSQLGWEPKVSLEDGLRETIAY 309
>gi|326505344|dbj|BAK03059.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326529325|dbj|BAK01056.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 220
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 81/118 (68%), Gaps = 8/118 (6%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R+DLDG + P+TICMIG G FIGSHLCEK++ ETPH +LA+DVY+DKI+HL++P
Sbjct: 6 RVDLDGGAVTPLTICMIGTGVFIGSHLCEKLMAETPHVVLAVDVYSDKIRHLVDPPPPHL 65
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINL--------AAICTPADYNTRPLDTIYSN 116
A RI FHRLNIK+D RLEGL+KMADL + L + PA +P D S+
Sbjct: 66 AGRISFHRLNIKNDPRLEGLVKMADLVLPLPPSPRGSSSGAAAPAPTGQQPGDPRKSD 123
>gi|302529550|ref|ZP_07281892.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. AA4]
gi|302438445|gb|EFL10261.1| NAD-dependent epimerase/dehydratase [Streptomyces sp. AA4]
Length = 324
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 159/351 (45%), Gaps = 37/351 (10%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
V + G GFIGSHL E LL +++ALD N L G +F R +I
Sbjct: 6 VRYLITGGAGFIGSHLTEH-LLARGDEVVALD--NLSTGTLDNLAGVAGHPGFRFVRGSI 62
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ +E + D +LAA + +D++ +N ++ ++ ++
Sbjct: 63 TDPNAVESCMAGIDAVFHLAAAVGVFTILDKTMDSLRTNLHGTENLLDAALRHDVPILVA 122
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST E+YGK L +D I GS K RWSYA AK L E +
Sbjct: 123 STSEIYGKNTADGLREDDDR----------------IIGSPLKNRWSYAEAKALDETFAH 166
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
E+GL IVRPFN +GPR G+ +PR F L +P+ + GQ
Sbjct: 167 LYAVEHGLRTVIVRPFNTVGPRQTGRYGMV-----IPR----FVTQALAGEPITVFGDGQ 217
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R F ++ D + A+ ++ + A G +FN+G+ + + T+ QLAE +V G
Sbjct: 218 QTRCFCHVHDVVPALADLLADET-AYGKVFNLGS-NEQTTISQLAE-------RVIGATG 268
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
V +E YG+GY+D +RIPD T Q+G+ P +L D++E+ +
Sbjct: 269 SSSAITKVPYEEAYGDGYEDMQRRIPDCTRAYNQIGFVPTRTLDDIIEAVV 319
>gi|28199422|ref|NP_779736.1| dTDP-glucose 4-6-dehydratase [Xylella fastidiosa Temecula1]
gi|28057528|gb|AAO29385.1| dTDP-glucose 4-6-dehydratase [Xylella fastidiosa Temecula1]
Length = 329
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 163/357 (45%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCEK L+ + H +L +D + D + +L+ G + +
Sbjct: 23 VLVTGGAGFLGSHLCEK-LVASGHDVLCVDNFYTGSKDSVINLI------GHPKFEL--- 72
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +++ D NLA +P Y P+ T ++ A+ ++ R++
Sbjct: 73 -IRHDVTFPLYVEV-DRIYNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRVKARIL 130
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG DP + E +G + R Y K+ E
Sbjct: 131 QASTSEVYG---------------DPEIHPQLE----TYWGRVNPVGIRSCYDEGKRCAE 171
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ LE + R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 172 TLFFDYWRQHKLEIKVTRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEPITIY 222
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D I+ +L M+E+P NG + N+GNP E T+ QLAEM+ ++ +S
Sbjct: 223 GDGTQTRSFCYVDDLIDGMLRMMESPKDFNGPV-NIGNP-TEFTMLQLAEMVLKLVGSIS 280
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ QLGW PK SL D L T+ Y
Sbjct: 281 KIVFQPLPL-------------DDPKQRQPDITLAKSQLGWEPKVSLEDGLRETIAY 324
>gi|15837213|ref|NP_297901.1| dTDP-glucose 4-6-dehydratase [Xylella fastidiosa 9a5c]
gi|9105480|gb|AAF83421.1|AE003906_10 dTDP-glucose 4-6-dehydratase [Xylella fastidiosa 9a5c]
Length = 329
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 163/357 (45%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCEK L+ + H +L +D + D + +L+ G + +
Sbjct: 23 VLVTGGAGFLGSHLCEK-LVASGHDVLCVDNFYTGSKDSVINLI------GHPKFEL--- 72
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +++ D NLA +P Y P+ T ++ A+ ++ R++
Sbjct: 73 -IRHDVTFPLYVEV-DRIYNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRVKARIL 130
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG DP + E +G + R Y K+ E
Sbjct: 131 QASTSEVYG---------------DPEIHPQLE----TYWGRVNPVGIRSCYDEGKRCAE 171
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ LE + R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 172 TLFFDYWRQHKLEIKVTRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEPITIY 222
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D I+ +L M+E+P NG + N+GNP E T+ QLAEM+ ++ +S
Sbjct: 223 GDGTQTRSFCYVDDLIDGMLRMMESPKDFNGPV-NIGNP-TEFTMLQLAEMVLKLVGSIS 280
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ QLGW PK SL D L T+ Y
Sbjct: 281 KIVFQPLPL-------------DDPKQRQPDITLAKSQLGWEPKVSLEDGLRETIAY 324
>gi|241258848|ref|YP_002978732.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240863318|gb|ACS60981.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 347
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 158/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 IMVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEIL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQFDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + ED GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQTEDYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F LR + + +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALRNESITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D I+ + ++ PA G I N+GNP E VR+LAEM+ E+ S
Sbjct: 207 GNGTQTRSFCYVDDLIDGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVIEMTGSKS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
G P DD +R PD++ QQLGW PK +L + LE T+ Y
Sbjct: 265 GIVFNPLPV-------------DDPTQRKPDISRATQQLGWQPKVNLREGLERTIAY 308
>gi|164665164|gb|ABY66025.1| glucuronic acid decarboxylase [Actinomadura madurae]
Length = 328
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 159/354 (44%), Gaps = 52/354 (14%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
+ G GFIG+HL ++++ D++ S+ G + H ++ D
Sbjct: 6 VTGGSGFIGAHLVDRLVAR-----------GDEVTVFDAVPSRDGRGSPREHARHVTGDV 54
Query: 82 R----LEGLIKMA-DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
R L +IK D+ +LAAI Y TRPLD I N + V++ + R++
Sbjct: 55 RAADALAEVIKPGVDVVYHLAAIVGVDRYLTRPLDVIDINVLGTRNVLELAARAGARVLV 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EV+GK +PA ED + G RW+Y+ +K L E +
Sbjct: 115 ASTSEVFGK--------------NPAV-PWGEDGD-RVLGPTTADRWTYSSSKALAEHMT 158
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A G ++GLE +VR FN GPR P+ V R + N + P + D G
Sbjct: 159 FAFGRQHGLESRVVRFFNVYGPRQR-------PAYIVSRSVHRALNGV----PPVVYDRG 207
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R F Y+ DA+E LL NPA A G+ FN+G +E TV EV A V+ A
Sbjct: 208 GQTRCFTYVDDAVEGALLAAGNPA-AAGYAFNIGT-TDETTV-------AEVVALVNKLA 258
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+E + V + E G Y+D +R+PD LGW P T L D L T+ +
Sbjct: 259 GVEATPLQVDTAEKLGPVYEDLPRRVPDTVRAAGLLGWRPGTGLEDGLTRTIEW 312
>gi|301058128|ref|ZP_07199180.1| RmlD substrate binding domain protein [delta proteobacterium
NaphS2]
gi|300447760|gb|EFK11473.1| RmlD substrate binding domain protein [delta proteobacterium
NaphS2]
Length = 319
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 173/353 (49%), Gaps = 41/353 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G GFIGSHL E LL+ ++ +D ++ K+ ++ + ++ +R+ I
Sbjct: 3 ILITGGAGFIGSHLAEH-LLQNGDEVFVIDNLWTGKLANISKIQNH---ERLHLVIDTIL 58
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
++S + LI D +LAA + P++T+ N V++ ++ K++ S
Sbjct: 59 NESVMNELIFKVDQIYHLAAAVGVRNIMDHPVETLDINVKGTEVVLRLANQFKKKVFIAS 118
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T E+YGK + L +D + G+++K+RW+YAC+K L E A
Sbjct: 119 TSEIYGKHVEHHLSEDDN----------------RVMGTVKKRRWAYACSKTLDEFQALA 162
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
E L I R FN +GPR G+ VL F + L +P+ + G
Sbjct: 163 YSDEKKLPVLIGRLFNTVGPRQTGQYGM---------VLPNFVQSALLGKPITVFGDGTQ 213
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+F ++ D +EA+ ++ P+ A G IFNVGN + EVT++ LA + E+ +S
Sbjct: 214 SRSFAHVNDVVEAITRLMGEPS-AEGDIFNVGN-NEEVTIKDLALKVKEMTGSLS----- 266
Query: 319 EEPTVD-VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+D V ++ YG G++D ++R P++ + + +G+ P L +++S + Y
Sbjct: 267 ---EIDFVPYEKAYGPGFEDMERRCPNIGKLKKTVGFEPSYDLESIIQSVIDY 316
>gi|421592173|ref|ZP_16036906.1| putative dTDP-glucose 4,6-dehydratase [Rhizobium sp. Pop5]
gi|403702182|gb|EJZ18822.1| putative dTDP-glucose 4,6-dehydratase [Rhizobium sp. Pop5]
Length = 340
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 157/355 (44%), Gaps = 61/355 (17%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 2 VTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEIL-- 50
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 51 RHDITFPLYVEV-DEIFNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIFQA 109
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERL 195
ST EVYG DPA + E+ GS+ R Y K+ E L
Sbjct: 110 STSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAETL 150
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ + G+E + R FN GPRM G RV++ F L+ +P+ +
Sbjct: 151 FFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNEPITIFGN 201
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+ SG
Sbjct: 202 GTQTRSFCYVDDLIEGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVVEMTGSKSGI 259
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD++ Q+LGW P SL + LE T+ Y
Sbjct: 260 VFKPLPI-------------DDPTQRKPDISRAKQELGWQPTVSLREGLEKTIAY 301
>gi|206895226|ref|YP_002246797.1| dTDP-glucose-4,6-dehydratase [Coprothermobacter proteolyticus DSM
5265]
gi|206737843|gb|ACI16921.1| dTDP-glucose 4,6 dehydratase [Coprothermobacter proteolyticus DSM
5265]
Length = 312
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 162/351 (46%), Gaps = 49/351 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHLCE++L E ++ I+++ +T + FH I+
Sbjct: 4 VLVTGGAGFIGSHLCERLLNEGNEVFCMDNLETGSIRNI-----ETFKENPLFHF--IQQ 56
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E + D N A +P Y P+ T+ ++ + AL +++ + +++ ST
Sbjct: 57 DV-IEPIELRVDEIFNFACPASPPRYQKDPVHTLKTSVLGALNLLELATNTGAKIMQAST 115
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P SP Q Y+ P R Y K+ E L +
Sbjct: 116 SEVYGD------PAISP--QPETYWGNVNPIGP---------RSCYDEGKRCAETLFFDY 158
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
G + G + ++R FN GPRMD P +G RV++ F L+ +PL + G
Sbjct: 159 GRQFGTKIKVIRIFNTYGPRMD-------PEDG--RVVSNFIAQALKNEPLTVYGDGSQT 209
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F YI D IE ++ M++ +G + N+GNP EVTV ++A+++ E+
Sbjct: 210 RSFCYIDDLIEGIMSMMQTDESFSGPV-NLGNPE-EVTVLEVAKLVLEL----------- 256
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S EF DD +R PD+T+ Q LGW P L + L +T+ Y
Sbjct: 257 --TCSKSEIEFRPLPQDDPKRRKPDITLARQTLGWEPTVKLKEGLITTIQY 305
>gi|326526557|dbj|BAJ97295.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 79/118 (66%), Gaps = 8/118 (6%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R+DLDG + P+TICMIG GGFIGSHLCEK++ ETPH +LA+DVY+DKI+HL+EP
Sbjct: 34 RVDLDGGAVPPLTICMIGTGGFIGSHLCEKLMAETPHVVLAVDVYSDKIRHLVEPPPPHL 93
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLA--------AICTPADYNTRPLDTIYSN 116
A I FH LNIK+D RL+GL+KMADL + L PA RP D S+
Sbjct: 94 ARHISFHHLNIKNDPRLKGLVKMADLVLPLPPSPRGSSRGAAAPAPTRRRPGDPRKSD 151
>gi|421854212|ref|ZP_16286826.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371477501|dbj|GAB32029.1| UDP-N-acetylglucosamine 4-epimerase [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 308
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 163/354 (46%), Gaps = 59/354 (16%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
M G GF+GSHLC LL+ HK++ +D Y TG+++ LN ++
Sbjct: 1 MTGGAGFVGSHLCGN-LLKKNHKVICMDNY------------YTGSEKNISQFLNNENFE 47
Query: 82 RLE-GLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+E +I+ DL + NLA +P Y P+ T+ ++ L V++ N +++
Sbjct: 48 FIEHNIIEPFDLKVDQIYNLACPASPPHYQKDPIYTLKTSIWGVLNVLEVARRNGAKMLQ 107
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG P SP Q +Y P R Y K++ E L
Sbjct: 108 ASTSEVYGD------PNISP--QLESYRGNVNTMGP---------RACYDEGKRVAETLC 150
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
Y + +VR FN GP+MD P +G RV++ F LR QP+ + G
Sbjct: 151 YEYNKRFDVPVKVVRIFNTYGPQMD-------PEDG--RVVSNFIIQALRNQPITVYGDG 201
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
Q R F Y+ D +E + +E G I N+GNP +E+TV+QLAE++ ++
Sbjct: 202 QQTRAFCYVSDLVEGFIRFMETGPEIIGPI-NLGNP-SEMTVKQLAELVIKI-------- 251
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T SS E+ DD +R PD+++ + L WNP+ SL D L T+ +
Sbjct: 252 -----TNSSSSVEYLSLPVDDPLQRCPDISLAKKILSWNPEVSLLDGLRETIAF 300
>gi|406836184|ref|ZP_11095778.1| NAD-dependent epimerase/dehydratase [Schlesneria paludicola DSM
18645]
Length = 371
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 176/359 (49%), Gaps = 37/359 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHL E+ LLE +++ LD + + + + R++ +I
Sbjct: 47 VLVTGGAGFIGSHLSER-LLEMGNEVTILDDLSTGRRENIAAIEKHPLLRVRSG--SITD 103
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
L ++ AD+ ++AA P+ TI +N +++ ++ N R+ ST
Sbjct: 104 SVLLADVMSKADVVYHMAAAVGVKLVADDPVRTIQTNIYPTEELLRLAAQRNIRVFIAST 163
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK PK+ +D +FG + RW+Y C+K + E L A
Sbjct: 164 SEVYGKN-----PKERWTEEDD-----------LVFGPTSRPRWAYGCSKAIDEFLALAF 207
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ GL I R FN +GPR G+ V+ F + L+ P+ + D GQ
Sbjct: 208 HRKLGLPVVIGRFFNVVGPRQVGHYGM---------VIPRFVDAALKGGPVVVYDDGQQV 258
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F ++++ ++AV+ ++E P+ A+G ++N+G+ + VT+RQLAE E+ +V +E
Sbjct: 259 RCFGHVREVVDAVIGLVETPS-AHGAVYNIGSDY-PVTIRQLAE---EIIQRVDPAVKIE 313
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378
+ ++ YG+ ++D +R+PD++ + + LG P +L +L+ + ++ A A
Sbjct: 314 F----LPYRDAYGDDFEDVRRRVPDVSRLEKTLGRKPTMTLGQILDDIIRWKREQLAAA 368
>gi|271967768|ref|YP_003341964.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum DSM
43021]
gi|270510943|gb|ACZ89221.1| NAD-dependent epimerase/dehydratase [Streptosporangium roseum DSM
43021]
Length = 332
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 173/353 (49%), Gaps = 43/353 (12%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
T + G GF+GSHL + +L ++ ++ ++ +L G R++ ++
Sbjct: 8 TYLITGGSGFVGSHLTDALLARGDSVVILDNLSTGRLANLAHA---AGNPRLRIVHGSVL 64
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ ++ L+ D+ ++LAA +PL ++ +N + V++ ++++ S
Sbjct: 65 DELMVDELVHRCDVVVHLAAAVGVKLIVEQPLRSLTTNIRGSEIVIEAAHRYRRKILVTS 124
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T E+YGK PL + S I GS RW+Y+ AK + E L A
Sbjct: 125 TSEIYGKN------SSGPLTE----------LSDRILGSPAVVRWAYSTAKAVDEILANA 168
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEG--VPRVLACFSNNLLRRQPLKLVDGG 256
E GL IVR FN +GPR P+ G +PR++ + ++ PL + G
Sbjct: 169 YHRERGLPTIIVRLFNTVGPRQS-------PAYGMVIPRLVRQAAGDV----PLTVFGDG 217
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R F ++ D +EA++ ++++ A G FNVG+ ++EV++ +LA+M+ E+ +G
Sbjct: 218 TQTRCFAHVGDVVEALVKLLDHDG-AVGQTFNVGS-NDEVSILELAKMIIELTGTTAG-- 273
Query: 317 ALEEPTVD-VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
VD +S E Y +G++D +R+PD T + + GW PK SL D+L ++
Sbjct: 274 ------VDLISYAEAYEKGFEDMTRRVPDTTKLRELTGWVPKRSLNDILTESI 320
>gi|297183095|gb|ADI19239.1| nucleoside-diphosphate-sugar epimerases [uncultured delta
proteobacterium HF0200_14D13]
Length = 316
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 165/355 (46%), Gaps = 62/355 (17%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GS LCE++L E H+++ALD + + HLL D F +
Sbjct: 10 VTGGAGFLGSFLCERLLAEG-HEVVALDNFFTGTKRNVAHLL--------DHTNFEL--V 58
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD +E ++ D NLA +P Y P+ T+ ++ + A+ ++ R++
Sbjct: 59 RHDV-VEPILVEVDWIFNLACPASPVHYQYNPVKTVKTSVMGAINMLGLAKRVRARILQA 117
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERL 195
ST EVYG DP + ED +GS+ R Y K++ E L
Sbjct: 118 STSEVYG---------------DPEVHPQTED----YWGSVNPIGPRSCYDEGKRVAETL 158
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ +N ++ I+R FN GPRM P++G RV++ F L +P+ L
Sbjct: 159 VMDYHRQNQVDAKIIRIFNTYGPRMH-------PNDG--RVVSNFIVAALNNEPITLFGD 209
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D IE +L M+++ N+GNP E TV +LA+ +TE+ S
Sbjct: 210 GSQTRSFCYVADLIEGILRMMQSENFIGP--VNLGNP-GEFTVMELAQKVTELTNSRSKI 266
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A E+ DD +R PD+++ Q+LGW P+ L D L+ T+ Y
Sbjct: 267 IAQEKRE-------------DDPTRRRPDISLAQQKLGWQPQVPLEDGLQKTIAY 308
>gi|220914294|ref|YP_002489603.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus
A6]
gi|219861172|gb|ACL41514.1| NAD-dependent epimerase/dehydratase [Arthrobacter chlorophenolicus
A6]
Length = 334
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 164/354 (46%), Gaps = 38/354 (10%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
+ G GFIGSHL E +L I+ D+ ++++L + G R +F +I
Sbjct: 4 AITGGAGFIGSHLVEHLLAAGDEVIVLDDLSTGRLENL---KGVIGHRRFRFIEGSILDR 60
Query: 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140
+ ++ + AD +LAA PL+++ +N V+ E L+ ST
Sbjct: 61 ATVDKAVAGADRVFHLAAAVGVNLIVDHPLESLRTNIHGTEVVLDSVLEAGASLLLASTS 120
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
E+YGK L ++S I GS K RW+YA AK + E +A
Sbjct: 121 EIYGKNTSDSLSEESD----------------RILGSALKSRWTYAAAKGIDEAFAHAYW 164
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
+ GL IVR FN +GPR G+ VPR++ L +PL + G R
Sbjct: 165 RQFGLRVAIVRLFNTVGPRQTGRYGMV-----VPRLV----RQALAGEPLTVYGDGHQTR 215
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F Y+ D + A+ + E+ RA G+ +N+G H E+++ LAE + E+ +
Sbjct: 216 CFSYVGDIVPAITRISEDE-RAYGNAYNLGGNH-EISILALAERIVELVGS-------DS 266
Query: 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V ++ Y EGY+D +R+PD T +G++PKT++ D + + + +RT
Sbjct: 267 PITLVPYEQAYSEGYEDMRRRVPDNTKAFGLVGFDPKTTV-DQIITNVAADNRT 319
>gi|445258994|ref|ZP_21409630.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
gi|444888811|gb|ELY12330.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 436]
Length = 191
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 8/187 (4%)
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+K
Sbjct: 1 LDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---SLNAARIGSSRAITQLILNLVEGTPIK 57
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L+DGGQ +R F I+D IEA+ +I N R +G I N+GNP NE ++++LA ++ + +
Sbjct: 58 LIDGGQQKRCFTDIRDGIEALFRIIVNDGDRCDGKIINIGNPDNEASIQELATLLLDSFD 117
Query: 311 KVSGEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
K P V S+ +YG+GY D R P + + LGW P ++ D +E T
Sbjct: 118 KHPLRCHF-PPFAGFQVVESRSYYGKGYQDVAHRKPSIDNARRCLGWEPSIAMRDTVEET 176
Query: 368 LTYQHRT 374
L + R+
Sbjct: 177 LDFFLRS 183
>gi|383758333|ref|YP_005437318.1| NAD-dependent epimerase/dehydratase family protein [Rubrivivax
gelatinosus IL144]
gi|381379002|dbj|BAL95819.1| NAD-dependent epimerase/dehydratase family protein [Rubrivivax
gelatinosus IL144]
Length = 343
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 172/373 (46%), Gaps = 50/373 (13%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQF 72
P P + + GA GF+GSHLC++ LLE ++LALD + + ++H+ E +F
Sbjct: 6 PASPHAVLVAGAAGFVGSHLCDR-LLERGCRVLALDDLSSGDVRHV---EHLRRHPAFRF 61
Query: 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
R +I E + + NLA +PA Y P+ T+ S+ + A +++ +
Sbjct: 62 VRHDITEPLPTEA--RDCERIFNLACPASPAYYQRHPVATVLSSAVGAWRLLEVAQQTGA 119
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
RL+H ST EVYG P+ P Q Y+ P R Y K+
Sbjct: 120 RLLHVSTSEVYGD------PQVHP--QSEGYWGHVNPIGP---------RACYDEGKRCA 162
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E + A +E G+ + R FN GPR+ P +G RV++ F L +PL +
Sbjct: 163 EAMCLAYASERGVAVRLARLFNCYGPRLR-------PGDG--RVVSNFIVQALAGRPLTV 213
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G+ R+F Y+ D ++ +L +++ A +G + N+GNP E T+ LAE + +
Sbjct: 214 YGDGRQTRSFCYVDDTVDGLLRLMD--AGFSGPV-NLGNP-QERTMLDLAERVLRL---- 265
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
T S F DD +R PD+T+ Q+LGW P+ ++ D L T+ Y
Sbjct: 266 ---------TGSRSRLVFEPLPADDPTRRCPDITLARQRLGWAPQVAIDDGLARTIEYFR 316
Query: 373 RTYAEAIKQAVAK 385
AEA + A+
Sbjct: 317 ALSAEAGARIAAQ 329
>gi|405376631|ref|ZP_11030584.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
gi|397326769|gb|EJJ31081.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
Length = 350
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 157/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +LA+D Y D + HLL D +F L
Sbjct: 7 IMVTGGTGFLGSFLCERLLREG-NDVLAVDNYYTGSRDNVLHLL--------DDPRFEIL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQFDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F L+ +P+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNEPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+ S
Sbjct: 207 GNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVIEMTGSKS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD++ Q LGW P +L + LE T+ Y
Sbjct: 265 SIVYKPLPV-------------DDPTQRKPDISRAKQDLGWQPTVNLREGLEKTIAY 308
>gi|209552261|ref|YP_002284176.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209539373|gb|ACI59305.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 346
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 165/377 (43%), Gaps = 64/377 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 IMVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEIL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F L+ QP+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNQPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+
Sbjct: 207 GNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVIEM----- 259
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
T SS + DD +R PD++ Q LGW P +L + LE T+ Y
Sbjct: 260 --------TGSKSSIVYNPLPIDDPTQRKPDISRAKQDLGWQPTVNLREGLEKTIAYFEW 311
Query: 374 TYAEAIKQAVAKPVASS 390
+ K A PV SS
Sbjct: 312 KLSAGAKSA---PVRSS 325
>gi|163781591|ref|ZP_02176591.1| UDP-glucuronate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
gi|159882811|gb|EDP76315.1| UDP-glucuronate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
Length = 314
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 160/356 (44%), Gaps = 57/356 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + GA GFIGSHLC++ L E H+++ LD + D + HL G +F +
Sbjct: 3 VLITGAAGFIGSHLCDRFLREG-HEVIGLDNFLTGSPDNVSHLF------GNPNFRFFKY 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + LEG + DL ++ A +P DY P+ T+ + + L + R +
Sbjct: 56 DVTNFIYLEGEL---DLILHFACPASPVDYMNHPIHTMKVDSMGTLHTLGLAKLKGARYV 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q Y+ P R Y AK+ E L
Sbjct: 113 FASTSEVYGN------PEVHP--QPETYWGRVNPIGP---------RSVYDEAKRFSEAL 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A E+G++ I R FN GPRM G RV+ F + +PL +
Sbjct: 156 TMAYHREHGIDTRIARIFNTYGPRMRVNDG---------RVVPNFIYQAITGKPLTVYGD 206
Query: 256 GQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F YI D +E + L IE +G +FN+GNP E T+ LA+++ ++ S
Sbjct: 207 GSQTRSFCYIDDLVEGIYRLAIEE--GLSGEVFNLGNP-TEHTILDLAKLIIDIAGSPSE 263
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ P DD D+R PD+T + +GW P+TS+ + L+ T+ +
Sbjct: 264 IVFTDRPV-------------DDPDRRKPDITKAKKVIGWEPETSIEEGLKRTVNW 306
>gi|239991283|ref|ZP_04711947.1| nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)
[Streptomyces roseosporus NRRL 11379]
gi|291448285|ref|ZP_06587675.1| NAD-dependent epimerase/dehydratase [Streptomyces roseosporus NRRL
15998]
gi|291351232|gb|EFE78136.1| NAD-dependent epimerase/dehydratase [Streptomyces roseosporus NRRL
15998]
Length = 328
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 163/348 (46%), Gaps = 39/348 (11%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPES-QTGADRIQFHRLNIK 78
C+I G GFIGSHL E LL H+++ LD ++ L P S G R+ R ++
Sbjct: 3 CLITGGAGFIGSHLTEH-LLGLGHEVVVLDDFSTGSDRNLAPFSGHPGLVRVV--RGSVC 59
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+E + D +LAA LD + +N V++ + ++ S
Sbjct: 60 DRETVESCMPGVDAIYHLAAAVGVFTILGNTLDCLRTNLHGTETVLETARAHGVPILVAS 119
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T E+YGK L +++ + GS K RWSYA AK L E L +
Sbjct: 120 TSEIYGKNTADGLSEEADR----------------VLGSPLKNRWSYAEAKALDETLAHL 163
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G E G+ IVR FN +GPR G+ +PR F L +P+ + G
Sbjct: 164 YGVEYGVSTVIVRLFNTVGPRQSGQYGMV-----IPR----FVGQALAGEPITVFGDGTQ 214
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F ++ D + A++ ++EN A +G ++N+GN ++++ LA+ + E S
Sbjct: 215 VRCFCHVHDIVPALVTLLEN-ADTHGTVYNLGNA-EQISITALAQRVVEATGSSS----- 267
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
P V V ++ YG G++D +RIPD T +++G+ P+ +L +++ +
Sbjct: 268 --PVVKVPYEQAYGPGFEDMQRRIPDCTRARERIGFRPRRTLDEIIAA 313
>gi|325110690|ref|YP_004271758.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305]
gi|324970958|gb|ADY61736.1| UDP-glucuronate decarboxylase [Planctomyces brasiliensis DSM 5305]
Length = 314
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 163/364 (44%), Gaps = 59/364 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
T+ + G GF+GSHLC++ L+E ++ +D + IKHLL G R + R
Sbjct: 5 TVLVTGGAGFLGSHLCDR-LIEMGDDVICVDNFFSGSKQNIKHLL------GHPRFELIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I H +E AD NLA +P Y P+ TI ++ + + V+ R+
Sbjct: 58 HDIVHPLFIE-----ADQVYNLACPASPKAYQYNPIKTIKTSTVGMVNVLGLAKRCGARV 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+H ST E+YG P+ P Q Y+ P R Y K++ E
Sbjct: 113 LHTSTSEIYGD------PEVHP--QPEEYWGNVNPVGP---------RSCYDEGKRVAES 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + LE IVR FN GPRM P +G RV++ F L +PL L
Sbjct: 156 LCINYHLAHQLEVRIVRIFNTYGPRMH-------PDDG--RVVSNFIMQALHGKPLTLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D IE + M+ N G + N+GNP E T++QLA+ + E+ SG
Sbjct: 207 DGLQTRSFCYVDDLIEGFIRMM-NQTETIGPV-NLGNP-GEFTMKQLAQAILEITGATSG 263
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P DD +R PD++ + L W P+T+L LE T+ + +R
Sbjct: 264 MTHEPLPQ-------------DDPKQRCPDISKAEKYLNWRPETNLHQGLERTIEF-YRQ 309
Query: 375 YAEA 378
+EA
Sbjct: 310 VSEA 313
>gi|344343345|ref|ZP_08774214.1| UDP-glucuronate decarboxylase [Marichromatium purpuratum 984]
gi|343805276|gb|EGV23173.1| UDP-glucuronate decarboxylase [Marichromatium purpuratum 984]
Length = 319
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 158/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ LLE +L +D + D I+HLL G + R
Sbjct: 8 VLVTGGAGFLGSHLCER-LLEQGCDVLCVDNFYTATKDNIRHLL------GHPHFELMRH 60
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ +E D NLA +P Y + P+ T ++ A+ ++ R+
Sbjct: 61 DVTFPLYVE-----VDEIYNLACPASPIHYQSDPVQTTKTSVHGAINMLGLAKRTGARIF 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P QD Y+ P R Y K+ E L
Sbjct: 116 QASTSEVYGD------PEVHP--QDEGYWGRVNPIGP---------RACYDEGKRCAETL 158
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++GL + R FN GPRM P +G RV++ F LR +P+ L
Sbjct: 159 FFDYHRQHGLRVKVARIFNTYGPRMH-------PDDG--RVVSNFIIQALRNEPITLYGD 209
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R F Y+ D IE ++ ++E+P + G I N+GNP E ++R+LAE + E+ S
Sbjct: 210 GSQSRAFCYVDDMIEGIVKLMESPDQVTGPI-NLGNP-VEFSMRELAECVRELTG--SNA 265
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+E P DD +R PD+++ + L W P+ L + L T+ Y
Sbjct: 266 PLIERPL-----------PVDDPRQRRPDISLARELLSWEPRVQLVEGLRRTVEY 309
>gi|424920365|ref|ZP_18343728.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392849380|gb|EJB01902.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 350
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 158/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 IMVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEIL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F L+ QP+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNQPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+
Sbjct: 207 GNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVIEM----- 259
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T SS + DD +R PD++ Q LGW P +L + LE T+ Y
Sbjct: 260 --------TGSKSSIVYNPLPIDDPTQRKPDISRAKQDLGWQPTVNLREGLEKTIAY 308
>gi|402491716|ref|ZP_10838504.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
gi|401810115|gb|EJT02489.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
Length = 343
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 157/355 (44%), Gaps = 61/355 (17%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 2 VTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEIL-- 50
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 51 RHDITFPLYVEV-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIFQA 109
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERL 195
ST EVYG DPA + E+ GS+ R Y K+ E L
Sbjct: 110 STSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAETL 150
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ + G+E + R FN GPRM G RV++ F L+ QP+ +
Sbjct: 151 FFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNQPITIFGN 201
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+
Sbjct: 202 GTQTRSFCYVDDLIEGFIRLMGTPAGVTGPI-NLGNP-GEFQVRELAEMVIEM------- 252
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T SS + DD +R PD++ Q LGW P +L + LE T+ Y
Sbjct: 253 ------TGSKSSIVYNPLPIDDPTQRKPDISRAKQDLGWQPTVNLREGLEKTIAY 301
>gi|383767938|ref|YP_005446921.1| UDP-glucuronate decarboxylase [Phycisphaera mikurensis NBRC 102666]
gi|381388208|dbj|BAM05024.1| UDP-glucuronate decarboxylase [Phycisphaera mikurensis NBRC 102666]
Length = 355
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 156/361 (43%), Gaps = 60/361 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLC++++ + H ++ LD + + HLL G + R
Sbjct: 19 VLVTGGAGFLGSHLCDRLVAQG-HDVICLDNFFTSQKTNVAHLL------GQRNFELIRH 71
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ LE D N+A +P Y P+ T+ + + ++ ++ R++
Sbjct: 72 DVTEPITLE-----VDRIYNMACPASPVHYQYNPIKTMKVSVMGSINLLGMAKRTGARIL 126
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG D P + + +P R Y K+ E L
Sbjct: 127 QASTSEVYG---------DPTPEHHPQTESYRGNVNPI------GVRACYDEGKRAAETL 171
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ NG++ +VR FN GPRM P +G RV+ F LR + + L
Sbjct: 172 FFDYWRSNGVDIRVVRIFNTYGPRMH-------PFDG--RVVTNFIVQALRGEDITLYGD 222
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHI------FNVGNPHNEVTVRQLAEMMTEVY 309
G R+F Y+ D ++ ++ M+E+ A G N+GNP E T+RQLAE + E+
Sbjct: 223 GSQTRSFCYVDDLVDVIMAMMEHGGNAGGDPETFVGPVNIGNP-GEFTIRQLAEKVIELT 281
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
S L P DD +R PD+++ ++LGW P+ L D L+ T+
Sbjct: 282 GSSSKLVELPLPK-------------DDPLQRKPDISLAKEKLGWEPRVPLADGLQRTIA 328
Query: 370 Y 370
Y
Sbjct: 329 Y 329
>gi|320102634|ref|YP_004178225.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
gi|319749916|gb|ADV61676.1| NAD-dependent epimerase/dehydratase [Isosphaera pallida ATCC 43644]
Length = 330
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 45/351 (12%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRLNI 77
+ G GFIG HLCE+++ + H++LALD + D ++ L G +R +F ++
Sbjct: 5 VTGGAGFIGGHLCERLIAQG-HEVLALDDLSTGSFDNLQRL------DGHERFEFRCASV 57
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+E ++ +LA+ +P+ TI + V+ C+ + ++
Sbjct: 58 LERRVVERCVRECQGVYHLASAVGVKLVVDQPVKTIETIVGGTEVVLNSCARYRRPVLLT 117
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EVYGK+ PK V ++ C+ G +RW+YACAK L E
Sbjct: 118 STSEVYGKS-----PK-----------VPFAESDDCVMGPTTTRRWAYACAKALDEFHAL 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A + L I R FN +GPR G+ +PR F L +P+ + G+
Sbjct: 162 AYWHQARLPVVIARLFNTVGPRQTGRYGMV-----IPR----FVAQGLAGEPITVYGDGR 212
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R F ++KD + A+ ++++P RA G +FN+GN EVT+ QLAE + ++ S E
Sbjct: 213 QSRCFAHVKDVVGALCGLMDHP-RARGEVFNIGN-DQEVTILQLAERVRDLTGGRS-EIR 269
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
L + E Y G++D +R+PD++ I + +G+ P L +L +
Sbjct: 270 L------IPYHEAYTVGFEDMMRRVPDLSKIRRLIGYRPTYDLDAILRDVI 314
>gi|119898093|ref|YP_933306.1| putative dTDP-glucose 4,6-dehydratase [Azoarcus sp. BH72]
gi|119670506|emb|CAL94419.1| putative dTDP-glucose 4,6-dehydratase [Azoarcus sp. BH72]
Length = 317
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 163/364 (44%), Gaps = 50/364 (13%)
Query: 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADR 69
+ RP P+ + + G GF+GSHLCE++L E ++L +D + + P Q
Sbjct: 1 MGARP-SPLRVLVAGGAGFLGSHLCERLLREG-GRVLCVDNFQTGCAANVAPLLQREGFT 58
Query: 70 IQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSE 129
++ H + ++ + D NLA +P Y P+ T+ ++ + A+ +++ +
Sbjct: 59 LREHDITAPLEADV-------DQIYNLACPASPLHYREDPVRTVRTSVVGAMNLLELATR 111
Query: 130 NNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAK 189
R++ ST E+YG P + P Q AY+ P R Y K
Sbjct: 112 TGARILQASTSEIYGD------PAEHP--QQEAYHGNVNPIGP---------RACYDEGK 154
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
+ E L + ++ L + R FN GPRM P +G RV++ F LR QP
Sbjct: 155 RCAETLFFDYHRQHELRTKVARIFNTYGPRMR-------PDDG--RVISNFVVQALRGQP 205
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
L L G R+F Y+ D I+ +L ++ + G + N+GNP E TVR+LA+ + +
Sbjct: 206 LTLYGDGSQSRSFCYVDDLIDGLLRLMNSADDFCGPV-NLGNP-VESTVRELADEVIRLT 263
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
S L P DD +R PD+T+ +LGW P T+L D L T+
Sbjct: 264 GSRSTLRYLPLPE-------------DDPVRRRPDITLARAELGWRPTTALEDGLRRTID 310
Query: 370 YQHR 373
Y R
Sbjct: 311 YFAR 314
>gi|433323729|ref|ZP_20401060.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli J96]
gi|432347827|gb|ELL42284.1| bifunctional UDP-glucuronic acid
decarboxylase/UDP-4-amino-4-deoxy-L-arabinose
formyltransferase [Escherichia coli J96]
Length = 188
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+D
Sbjct: 1 MIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLID 57
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K
Sbjct: 58 GGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 117
Query: 314 GEAALEEPTVD---VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P V S +YG+GY D + R P + + L W PK + + ++ TL +
Sbjct: 118 LRHYF-PPFAGFRVVESSSYYGKGYQDVEHRKPSIRNARRCLNWEPKIDMQETIDETLDF 176
Query: 371 QHRT 374
RT
Sbjct: 177 FLRT 180
>gi|330997138|ref|ZP_08320991.1| UDP-glucuronic acid decarboxylase 1 [Paraprevotella xylaniphila YIT
11841]
gi|329570933|gb|EGG52640.1| UDP-glucuronic acid decarboxylase 1 [Paraprevotella xylaniphila YIT
11841]
Length = 355
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 163/369 (44%), Gaps = 52/369 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHLCE LL +++ LD N + H P++ + + +L ++H
Sbjct: 37 VIIAGGAGFIGSHLCE-YLLHKGDRVICLD--NFRTGH---PKNVSALTNHPYFKL-VEH 89
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D + +IK D NLA +P Y P++T ++ I L +++ EN+ R + ST
Sbjct: 90 DITMPYMIKGIDEIYNLACPASPIHYQDSPIETTKTSVIGTLNLLELARENHCRFLQAST 149
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIERLIY 197
EVYG D + P Y +G + R Y K+ E L
Sbjct: 150 SEVYG---------DPEVHPQPESY----------WGHVNPNGIRSCYDVGKRCAESLCM 190
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G+ I+R FN GPRM G RV++ F L+ + L + G
Sbjct: 191 DYHRRYGVAVKIIRIFNTYGPRMACDDG---------RVVSNFILQALQGKDLTIYGNGM 241
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D I+ + ++ P G + N+GNP E T+ + AE + E+ S
Sbjct: 242 QTRSFQYVDDLIQGMERIMSTPDSFTGPV-NLGNP-EEHTILEFAERILELTGSRSRMVF 299
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377
P DD +R PD+T+ Q L W+P+ SL + L+ T+ Y AE
Sbjct: 300 RPLPA-------------DDPKRRNPDITLARQALDWHPRISLREGLQQTIAYYRNLLAE 346
Query: 378 AIKQAVAKP 386
+ Q +++P
Sbjct: 347 SPSQNISRP 355
>gi|190894607|ref|YP_001984900.1| putative dTDP-glucose 4,6-dehydratase [Rhizobium etli CIAT 652]
gi|190700268|gb|ACE94350.1| putative dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CIAT
652]
Length = 350
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 158/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 VLVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEVL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F L+ +P+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNEPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+
Sbjct: 207 GNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVIEM----- 259
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T SS + DD +R PD++ Q LGW P +L + LE T+ Y
Sbjct: 260 --------TGSKSSIVYNPLPIDDPTQRKPDISRATQDLGWQPTVNLREGLEKTIAY 308
>gi|344342217|ref|ZP_08773117.1| UDP-glucuronate decarboxylase [Thiocapsa marina 5811]
gi|343797890|gb|EGV15864.1| UDP-glucuronate decarboxylase [Thiocapsa marina 5811]
Length = 322
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 157/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE++L + H ++ LD + D I HLLE + L
Sbjct: 9 ILVTGGAGFLGSHLCERLLADG-HDVICLDNFFTGTKDNIAHLLESP---------YFEL 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 59 -MRHDVTFPLYVEV-DEIYNLACPASPIHYQFDPVQTTKTSVHGAINMLGLAKRVKAKIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG D + P +Y +G + R Y K+ E
Sbjct: 117 QASTSEVYG---------DPAIHPQPEHY----------WGHVNPIGPRSCYDEGKRCAE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++G+ + R FN GPRM P++G RV++ F LR QP+ +
Sbjct: 158 TLFFDYRRQHGMRIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALRNQPITIY 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ +P G + N+GNP E T+ +LAE + E+ S
Sbjct: 209 GEGTQTRSFCYVDDLIEGFIRLMNSPDDLTGPV-NLGNP-GEFTMIELAETILELTGSRS 266
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ NQ LGW PK L + LE T+ Y
Sbjct: 267 QLVHEALPQ-------------DDPKQRKPDIGFANQHLGWEPKIPLREGLEPTIAY 310
>gi|403235326|ref|ZP_10913912.1| NAD-dependent epimerase/dehydratase [Bacillus sp. 10403023]
Length = 326
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 154/351 (43%), Gaps = 38/351 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +++ + I D+ N KI L + IQ L+
Sbjct: 3 ILVTGGSGFIGSHLVTQLIAQGHDVITLDDLSNGKISLLNQVMDNPKHTFIQGSVLD--- 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
S L L+ D+ +LAA+ + PL I N V+++ ++++ ST
Sbjct: 60 RSLLNELMDQVDVVFHLAAVLGVKNLVEHPLKVIEGNIDGTRNVLEFAFARKQKVVFSST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P +D S + GS K RW YA AK L E L +A
Sbjct: 120 SEVYGKN------NNLPYNED----------SDRVLGSTLKNRWCYATAKALDEHLCFAY 163
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
AE GL T+VR FN GP G G+ V+ F L P+ + G
Sbjct: 164 -AEKGLPITVVRYFNAYGP------GATTSDYGM--VIPKFIKAALTNSPITVYGDGNQT 214
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F YI D ++ + ++ + NG +FN+G E+++ QLA K+
Sbjct: 215 RCFTYIDDTVQGTIKCMD--SNYNGEVFNIGRDE-EISINQLAN-------KIKFLCNSN 264
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ + E YGE Y+D+ KRIP+ LG++P S+ + L T+ Y
Sbjct: 265 SDIIHIPYDEIYGEKYEDTPKRIPNNEKARSLLGFSPLISIDEGLRKTIAY 315
>gi|424873042|ref|ZP_18296704.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393168743|gb|EJC68790.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 340
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 157/356 (44%), Gaps = 57/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
T+ + G GGF+GSHLCE+ LL+ H+++ LD ++ + HL A +FH
Sbjct: 24 TVLVNGGGGFLGSHLCER-LLQRDHRVICLDNFSTGRRANVDHL--------ASNTRFH- 73
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD R I+ A L N A+ +P DY P+ T+ N + A+ + + +
Sbjct: 74 -IVEHDVRQPFDIE-ASLIFNFASPASPPDYQRDPVGTLLINVLGAVNTLDCARKTGAVV 131
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P SP Q +Y P R Y K+ E
Sbjct: 132 VQSSTSEVYGD------PIHSP--QHESYCGNVNQIGP---------RGCYDEGKRSAET 174
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + G++ + R FN GPRM G RV++ F LR L +
Sbjct: 175 LFFDYHRTYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNADLTIYG 225
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GQ R+F Y+ D IE L + NG I N+GNP E+TVR+LAE++ ++ S
Sbjct: 226 DGQQTRSFCYVDDLIEGFLRFSAAGSACNGPI-NLGNP-TEMTVRRLAEIIRDLTNSRSR 283
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L T DD +R PD++ +LGW P+ L L T+ Y
Sbjct: 284 IVHLPAVT-------------DDPRQRRPDISRAMAELGWQPRIGLETGLARTVDY 326
>gi|336179736|ref|YP_004585111.1| UDP-glucuronate decarboxylase [Frankia symbiont of Datisca
glomerata]
gi|334860716|gb|AEH11190.1| UDP-glucuronate decarboxylase [Frankia symbiont of Datisca
glomerata]
Length = 321
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 166/372 (44%), Gaps = 62/372 (16%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLN 76
+ G GF+GSHLCE++L E H ++ LD + + HL TG + + R +
Sbjct: 5 VVTGGAGFLGSHLCERLLDEG-HAVVCLDNFITGTPANVAHL------TGHEHFRLVRCD 57
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ + G + D ++ A+ +P DY P+ T+ I L + E R +
Sbjct: 58 VTDYVHIAGSV---DYVLHFASPASPIDYLNLPIHTLKVGSIGTLHALGLAKEKRARFVL 114
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG P+ P +D Y+ P R Y AK+ E L
Sbjct: 115 ASTSEVYGD------PQIHPQSED--YWGHVNPVGP---------RGVYDEAKRFGEALT 157
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
A +G++ I+R FN GPRM P++G R + F+ LR +P+ + G
Sbjct: 158 MAYRRSHGVDAGIIRIFNTHGPRMR-------PNDG--RAIPTFATQALRGEPITVAGDG 208
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGH--IFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
R+ IY+ D +E ++ M +GH N+GNPH E+ + +LA+++ EV
Sbjct: 209 SQTRSIIYVDDLVEGIVRMT-----FSGHPGPMNIGNPH-ELPILELAQLVREVVKS--- 259
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
E P V E DD R PD+++ + LGW P L L+ST+++ R
Sbjct: 260 ----ESPITFVPRPE------DDPTVRQPDISLARRILGWEPAVDLRSGLDSTVSW-FRE 308
Query: 375 YAEAIKQAVAKP 386
+ + + V +P
Sbjct: 309 HPDVARPDVDRP 320
>gi|424877456|ref|ZP_18301102.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392521603|gb|EIW46330.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 350
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 155/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 VMVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDSRFEVL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQFDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F L+ +P+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNEPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+ S
Sbjct: 207 GNGTQTRSFCYVDDLIEGFIRLMGTPAGVTGPI-NLGNP-GEFQVRELAEMVIEMTGSKS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ Q LGW P +L + LE T+ Y
Sbjct: 265 SIVYKPLPM-------------DDPTQRKPDIRRAMQDLGWQPTVNLREGLEKTIAY 308
>gi|320354254|ref|YP_004195593.1| NAD-dependent epimerase/dehydratase [Desulfobulbus propionicus DSM
2032]
gi|320122756|gb|ADW18302.1| NAD-dependent epimerase/dehydratase [Desulfobulbus propionicus DSM
2032]
Length = 321
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 158/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E +L LD + D + HLL F L
Sbjct: 9 VLVTGGAGFLGSHLCERLLNEN-CDVLCLDNFYSGTKDNVAHLLNNP---------FFEL 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 59 -IRHDVTFPLYVEV-DEIFNLACPASPIHYQWDPVQTTKTSVHGAINMLGLAKRTKAKIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG D + P Y +G + R Y K+ E
Sbjct: 117 QASTSEVYG---------DPEVHPQPESY----------WGRVNPIGIRSCYDEGKRCAE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++GLE +VR FN GPRM P++G RV++ F LR + + +
Sbjct: 158 TLFFDYRRQHGLEIKVVRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEDITIY 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + M+ +P G I N+GNP +E T+RQLAE + A V
Sbjct: 209 GDGLQSRSFCYVDDLIEGFMRMMASPQEVTGPI-NMGNP-DEFTIRQLAET---ILAMVG 263
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
G + L F DD +R PD+T+ LGW P+ L LE T+ Y
Sbjct: 264 GTSKLV----------FKPLPQDDPRQRQPDITVARTVLGWQPQVRLAAGLEPTIAY 310
>gi|383456513|ref|YP_005370502.1| NAD-dependent epimerase/dehydratase [Corallococcus coralloides DSM
2259]
gi|380734171|gb|AFE10173.1| NAD-dependent epimerase/dehydratase [Corallococcus coralloides DSM
2259]
Length = 319
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 153/355 (43%), Gaps = 58/355 (16%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALD---VYNDKIKHLLEPESQTGADRIQFHRLNI 77
++G GF+GSHLCE++L + +LA+D N+ L+P + QF +I
Sbjct: 7 VVLGGAGFVGSHLCERLLDDGAESVLAVDNLITGNEANVRTLKPRAG-----FQFVNQDI 61
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
++G + D +NLA+ +P DY P++T+ I +K + +
Sbjct: 62 TEGLEVDGPV---DFVLNLASPASPIDYANLPIETLRVGSIGTENALKLAEKKKAVFLMA 118
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERL 195
ST EVYG DP + KED +G++ R Y AK+ E +
Sbjct: 119 STSEVYG---------------DPLVHPQKED----YWGNVNPIGPRSVYDEAKRYSEAI 159
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A G+ IVR FN GPRM G RV+ F L+ + +
Sbjct: 160 SAAYERSRGVNVRIVRIFNTYGPRMRLNDG---------RVVPAFVGQALKGEDFSVFGD 210
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+KD ++ ++ ++ + R N+GNP E+T++Q AE + E A G
Sbjct: 211 GSQTRSFCYVKDLVDGLVRLVLSDVRGP---VNIGNPR-EMTIKQFAEAVRE--AAGGGR 264
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ P DD +R PD+T LGW PK L D L T+ Y
Sbjct: 265 QIVYHPLPK-----------DDPKQRQPDITRARTLLGWEPKVKLEDGLRDTIAY 308
>gi|392380465|ref|YP_004987622.1| putative sugar-nucleotide epimerase/dehydratase [Azospirillum
brasilense Sp245]
gi|356882995|emb|CCD04014.1| putative sugar-nucleotide epimerase/dehydratase [Azospirillum
brasilense Sp245]
Length = 319
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 160/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLL-EPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L + A + + I HLL P +
Sbjct: 11 VLVTGGAGFLGSHLCERLLARGDEVVCADNYFTGSRSNIAHLLGHPNFEA---------- 60
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +++ D NLA +P Y P+ T ++ A+ ++ N R++
Sbjct: 61 -IRHDVTFPLYVEV-DQIYNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRLNARIL 118
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DPA + E+ +G++ R Y K+ E
Sbjct: 119 QASTSEVYG---------------DPAIHPQPEE----YWGNVNPIGPRSCYDEGKRCAE 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++GL ++R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 160 TLFFDYHRQHGLAIKVMRIFNTYGPRMH-------PNDG--RVVSNFIMQALRNEPITVY 210
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GQ R+F Y+ D IE ++ ++++P G + NVGNP E T+ +LAE +V A
Sbjct: 211 GQGQQTRSFCYVDDLIEGMIRLMDSPDEVTGPV-NVGNP-GEFTMLELAE---QVIALTG 265
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +E + DD +R PD+T LGW P L D LE T+ Y
Sbjct: 266 SRSLVEHRPLP----------QDDPRQRRPDITKAKALLGWEPTVPLRDGLERTIAY 312
>gi|115522303|ref|YP_779214.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
gi|115516250|gb|ABJ04234.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
Length = 315
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 161/357 (45%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC+ +LL H++L +D Y I+HL+ GA R +
Sbjct: 7 ILISGGAGFIGSHLCD-LLLAEGHEVLCVDNYFTGWRRNIEHLV------GAPRFEL--- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D+ NLA +P Y P+ T+ ++ A+ ++ R+
Sbjct: 57 -MRHDVTFPLYVEVDDI-YNLACPASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRARIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG D + P Y +G + R Y K+ E
Sbjct: 115 QASTSEVYG---------DPNVHPQPESY----------WGHVNPLGIRACYDEGKRAAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ + + R FN GPRM PS+G RV++ F L+ Q + +
Sbjct: 156 TLFFDYHRQHKVRIKVARIFNTYGPRMH-------PSDG--RVVSNFIVQALQNQDISIY 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D ++ ++ ++ P G + N+GNP E +VRQLAEM+ E+ S
Sbjct: 207 GDGSQTRSFCYVTDLLDGIVKLMNTPEGFIGPV-NLGNPF-EFSVRQLAEMVIELTDSKS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L P+ DD +R PD+T+ L W PK +L D L+ T+ Y
Sbjct: 265 KLIFLPLPS-------------DDPRQRQPDITLARNTLQWEPKVALADGLQETIGY 308
>gi|365856424|ref|ZP_09396441.1| putative UDP-glucuronic acid decarboxylase 1 [Acetobacteraceae
bacterium AT-5844]
gi|363717960|gb|EHM01316.1| putative UDP-glucuronic acid decarboxylase 1 [Acetobacteraceae
bacterium AT-5844]
Length = 379
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 155/355 (43%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ LL H +L +D + I HLL G R +
Sbjct: 8 VLVTGGAGFLGSHLCER-LLRDGHDVLCVDNFFTGRKSNIAHLL------GHSRFEV--- 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D+ NLA +P Y P+ T + I A+ ++ R++
Sbjct: 58 -MRHDITFPLYVEVDDI-YNLACPASPVHYQFDPVQTTKVSVIGAINMLGLAKRVGARIL 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P P R+D + + SP R Y K+ E L
Sbjct: 116 QASTSEVYGD------PTVHPQRED-----YRGNVSPL------GPRACYDEGKRCAETL 158
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ + +VR FN GPR+ PS+G RV++ F +R + L +
Sbjct: 159 FFDYARQHKVRIRVVRIFNTYGPRLH-------PSDG--RVVSNFIAQAIRGEDLTIYGD 209
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R F Y+ D IE + M+E G + N+GNPH E+ V LAE + + SG
Sbjct: 210 GSQTRAFCYVDDLIEGFVSMMEADDSVTGPV-NLGNPH-EIPVLTLAERIIALIGSSSGI 267
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ L W+P+ SL + L T+ Y
Sbjct: 268 VRRPLPQ-------------DDPLQRCPDITLAQNLLNWSPRVSLDEGLRRTVAY 309
>gi|117924833|ref|YP_865450.1| NAD-dependent epimerase/dehydratase [Magnetococcus marinus MC-1]
gi|117608589|gb|ABK44044.1| NAD-dependent epimerase/dehydratase [Magnetococcus marinus MC-1]
Length = 320
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 163/355 (45%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY--NDKIKHLLEPESQTGADRIQFHRLNI 77
I + G GF+GSHLCE+ LL H+++ +D + D+ L + +G R +F I
Sbjct: 9 ILVTGGAGFLGSHLCER-LLNAGHEVICVDNFFTGDRDNIL----AISGHPRFEF----I 59
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD L +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 60 RHDITLPIYLEV-DEIYNLACPASPIHYQLDPVQTTKTSVHGAINMLGLAKRTGAKIFQA 118
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERL 195
ST EVYG DPA + +E +G++ R Y K+ E L
Sbjct: 119 STSEVYG---------------DPAMHPQQES----YWGNVNPIGPRACYDEGKRCAETL 159
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ + R FN GPRM P++G RV++ F LR +P+ L
Sbjct: 160 FFDYNRQHKTRIRVARIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEPITLFGE 210
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
GQ R+F Y+ D IE + +++ P G I N+GNP E T++QLAE++ E+ +G
Sbjct: 211 GQQTRSFCYVDDLIEGFVKLMDAPDDVTGPI-NLGNP-VEFTIQQLAELVIELTG--AGS 266
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ Q L W P L + L T+ Y
Sbjct: 267 ILVHKPLPQ-----------DDPRQRKPDITLAQQHLNWQPTIPLREGLGKTIAY 310
>gi|406994492|gb|EKE13478.1| hypothetical protein ACD_13C00015G0043 [uncultured bacterium]
Length = 314
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 167/366 (45%), Gaps = 63/366 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLE-PESQ-TGADRIQF 72
++ + G GFIGSHLC +++ E +K++ LD ++HLL+ P + AD +Q
Sbjct: 3 SVLVTGGAGFIGSHLCNRLVKEG-YKVICLDNLLTGSKKNVEHLLDDPNFEFVEADVVQP 61
Query: 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
N + +D +LA+ +P DY P +T+ +N + L V+K E
Sbjct: 62 LIFNNRS----------SDYIFHLASPASPIDYQNYPEETLLANSMGTLNVLKLAKETGA 111
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQ 190
+++ ST EVYG DP LK FG++ R Y +K+
Sbjct: 112 KVLIASTSEVYG---------------DP----LKHPQKETYFGNVNTFGPRSCYDESKR 152
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E Y ++ ++ I+R FN GPRM G RV++ F L P+
Sbjct: 153 FAESATYVYFRKHDIDVRIIRIFNTYGPRMQKDDG---------RVVSNFIMQSLSDAPI 203
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
K+ G R+F Y+ D +E + + P G IFN+GNP +E T+++LAE +
Sbjct: 204 KIDGDGSQTRSFCYVDDLVEGIEKAMFAPG-TTGEIFNLGNP-DEFTIKELAEKII---- 257
Query: 311 KVSGEAALEEPTVDVSSKEFYGE-GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
K++G S E+ G DD +R PD+T + LGW PKT+L L+ T+
Sbjct: 258 KLTGSK---------SEIEYSGTFREDDPMRRQPDITKAKEILGWEPKTNLEAGLQKTIE 308
Query: 370 YQHRTY 375
+ +
Sbjct: 309 FYKSNF 314
>gi|218781939|ref|YP_002433257.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans
AK-01]
gi|218763323|gb|ACL05789.1| NAD-dependent epimerase/dehydratase [Desulfatibacillum alkenivorans
AK-01]
Length = 325
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 166/354 (46%), Gaps = 39/354 (11%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLLEPESQTGADRIQFHRLN 76
I + G GFIGSHL E L + + D+ D + HL E A R+ H
Sbjct: 3 ILITGGAGFIGSHLAEAYLKQGDEVYVIDDLSTGSLDNLAHLQANEEY--AKRLFVHVDT 60
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
I + L +I D+ ++AA PL +I N V+ C++ K+++
Sbjct: 61 ILNHDILLQMIGTCDVVFHMAAAVGVQYILDNPLRSIRINIRGTEMVLDLCAKFKKKVLI 120
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
S+ EVYGK + +PL + I+G K RWSYA +K + E
Sbjct: 121 ASSSEVYGKHL------HAPLVE----------TDNIIYGPSSKFRWSYAASKLMDEFTA 164
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
A ENGLE +VR FN +GPR G+ +PR+++ L + L + G
Sbjct: 165 LAHHRENGLEAIVVRFFNTVGPRQTGTYGM-----VIPRLVS----QALTGKDLTVYGDG 215
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+ RTF Y++D ++AV+L++++P A G +FN+G E++++ LA + E KV +
Sbjct: 216 EQSRTFTYVEDVVKAVMLLVKHP-EAAGEVFNIGGV-EEISIKDLAYKIVE---KVGSSS 270
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++ + +E + ++D +R+P + + G+ P T L +L+ + +
Sbjct: 271 QVKL----IPYEEAFPADFEDMQRRLPSIEKLKNLTGYAPTTDLNAILDKVIEF 320
>gi|116669787|ref|YP_830720.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24]
gi|116609896|gb|ABK02620.1| NAD-dependent epimerase/dehydratase [Arthrobacter sp. FB24]
Length = 354
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 162/361 (44%), Gaps = 38/361 (10%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF 72
+ + V + G GFIGSHL E +L + D+ ++++L + G F
Sbjct: 15 KKVGEVKTAITGGAGFIGSHLVEHLLAAGDKVTVLDDLSTGRLENL---RTVIGHRDFHF 71
Query: 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
I + ++ ++ AD +LAA PL+++ +N V+ E+
Sbjct: 72 VEGTILDRAAVDKVVAGADRVFHLAAAVGVNLIVEHPLESLRTNIHGTEVVLDAVLESGA 131
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
L+ ST E+YGK L ++S I GS K RW+YA AK +
Sbjct: 132 SLLLASTSEIYGKNTSDSLSEESDR----------------ILGSALKSRWTYAAAKGID 175
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E +A + GL IVR FN +GPR G+ VPR++ L +PL +
Sbjct: 176 EAFAHAYWRQFGLPVAIVRLFNTVGPRQTGRYGMV-----VPRLV----KQALAGEPLTV 226
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R F Y+ D + A+ + E + A G+ +N+G + E+++ LA+ + E+
Sbjct: 227 YGDGHQTRCFSYVGDIVPAITRISEEKS-AYGNAYNLGGSY-EISILTLAQRIVELLGS- 283
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
E P V +E Y EGY+D +R+P+ + +G++PKT+L D + + H
Sbjct: 284 ------ESPITLVPYEEAYAEGYEDMRRRVPNNSKAKDLVGFDPKTTL-DQIILNVAADH 336
Query: 373 R 373
R
Sbjct: 337 R 337
>gi|424889540|ref|ZP_18313139.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393171758|gb|EJC71803.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 350
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 160/369 (43%), Gaps = 61/369 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 IMVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEIL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F L+ +P+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNEPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+
Sbjct: 207 GNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVIEM----- 259
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
T SS + DD +R PD+ + LGW P +L + LE T+ Y
Sbjct: 260 --------TGSKSSIVYNPLPIDDPTQRKPDIRRAKEDLGWQPTVNLREGLEKTIAYFEW 311
Query: 374 TYAEAIKQA 382
+ K A
Sbjct: 312 KLSAGAKSA 320
>gi|424892758|ref|ZP_18316338.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|424893015|ref|ZP_18316595.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393184039|gb|EJC84076.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393184296|gb|EJC84333.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 347
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 160/371 (43%), Gaps = 61/371 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS LCE++L E + +L +D Y D + HLL D +F L
Sbjct: 7 IMVTGGTGFLGSFLCERLLREG-NDVLCVDNYYTGSRDNVLHLL--------DDPRFEIL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T+ +N A+ ++ ++
Sbjct: 58 --RHDITFPLYVEV-DEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DPA + E+ GS+ R Y K+ E
Sbjct: 115 QASTSEVYG---------------DPAVHPQPEEYR----GSVNPIGPRACYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G+E + R FN GPRM G RV++ F L+ +P+ +
Sbjct: 156 TLFFDYHRQYGVEIRVARIFNTYGPRMQTNDG---------RVVSNFIVQALQNEPITIF 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ PA G I N+GNP E VR+LAEM+ E+
Sbjct: 207 GNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPI-NLGNP-GEFQVRELAEMVIEM----- 259
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
T SS + DD +R PD+ + LGW P +L + LE T+ Y
Sbjct: 260 --------TGSKSSIVYNPLPIDDPTQRKPDIRRAKEDLGWQPTVNLREGLEKTIAYFEW 311
Query: 374 TYAEAIKQAVA 384
A K A
Sbjct: 312 KLAAGAKTTPA 322
>gi|134100450|ref|YP_001106111.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea
NRRL 2338]
gi|291005071|ref|ZP_06563044.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea
NRRL 2338]
gi|133913073|emb|CAM03186.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora erythraea
NRRL 2338]
Length = 326
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 169/354 (47%), Gaps = 42/354 (11%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
+ GA GFIGSHL E++L E H ++ LD + + ++L P+ AD + ++
Sbjct: 5 VTGAAGFIGSHLTEQLLAEG-HSVVGLDDLSTGRFENL--PD----ADEFELVNGSVMDR 57
Query: 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140
++ L D+ +LAA R + ++ +N V+ N RL+ ST
Sbjct: 58 GLVDELTSEVDIVFHLAAAVGAFVIQERTIRSLLTNIHGTENVLDAALRYNARLLLASTS 117
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
E+YGK PK V + + GS RW+Y+ AK + E L +A
Sbjct: 118 EIYGKN-----PK-----------VGLREGDDRVIGSPLMSRWTYSEAKAIDESLTHAYV 161
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
E GL IVR FN +GPR G+ +PR++ N L+ +PL + G+ R
Sbjct: 162 RELGLRAVIVRLFNTVGPRQTGRYGMV-----IPRMV----NQALQGRPLTIFGTGRQVR 212
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F ++ D + A++ +++ +A G N+G+ +V++ +LA + E+ S
Sbjct: 213 CFCHVDDVVPALVELVQLD-KARGSAVNLGSGE-QVSIAELAARIIEMTGSSS------- 263
Query: 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
TV V ++ YG GY+D +R+PD + + +G+ P +L D++ + + Q R+
Sbjct: 264 DTVRVPYEQAYGPGYEDMQRRVPDCSRARELIGFEPSRTLDDIIRAVIAEQTRS 317
>gi|116249843|ref|YP_765681.1| dTDP-glucose 4-6-dehydratase-like protein [Rhizobium leguminosarum
bv. viciae 3841]
gi|115254491|emb|CAK05565.1| putative dTDP-glucose 4-6-dehydratase-like protein (UDP-glucuronic
acid decarboxylase) [Rhizobium leguminosarum bv. viciae
3841]
gi|380875863|gb|AFF27635.1| UDP-xylose synthase [Rhizobium leguminosarum bv. viciae 3841]
Length = 341
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 157/356 (44%), Gaps = 57/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
T+ + G GGF+GSHLCE+ LL+ H+++ LD ++ + HL A +FH
Sbjct: 25 TVLVNGGGGFLGSHLCER-LLQHGHRVICLDNFSTGRRANVDHL--------ASNTRFH- 74
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD R I+ A L N A+ +P DY P+ T+ +N + A+ + + +
Sbjct: 75 -IVEHDVRQPFDIE-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDCARKTGAIV 132
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P SP Q +Y P R Y K+ E
Sbjct: 133 VQSSTSEVYGD------PIHSP--QHESYCGNVNQIGP---------RGCYDEGKRSAET 175
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + G++ + R FN GPRM G RV++ F LR L +
Sbjct: 176 LFFDYHRTYGVDVKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNADLTIYG 226
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GQ R+F Y+ D IE L + NG I N+GNP E+TVR+LAE++ ++ S
Sbjct: 227 DGQQTRSFCYVDDLIEGFLRFSTAGSACNGPI-NLGNP-TEMTVRRLAEIIRDLTNSRSR 284
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L T DD +R PD++ +L W P+ L L T+ Y
Sbjct: 285 IVHLPAVT-------------DDPRQRRPDISRAMAELDWQPRIGLETGLARTVDY 327
>gi|83950108|ref|ZP_00958841.1| NAD-dependent epimerase/dehydratase family protein [Roseovarius
nubinhibens ISM]
gi|83838007|gb|EAP77303.1| NAD-dependent epimerase/dehydratase family protein [Roseovarius
nubinhibens ISM]
Length = 347
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 171/375 (45%), Gaps = 58/375 (15%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHR 74
T+ + G GF+GS LC+ + + ++++ LD + I HLL+ S +F
Sbjct: 26 TVLITGGAGFLGSQLCD-VYIARDYRVICLDDLSTGRLSNIGHLLDHPS------FEFVE 78
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++ + +G I DL N+A +P Y P+ T +N A +++ ++ R+
Sbjct: 79 QDVIEPFQPKGCI---DLIFNMACPASPPKYQRDPIHTFKTNIQGAENMLRLAHKHGARI 135
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST E+YG P+ SP Q +Y+ P R Y K+ E
Sbjct: 136 LQASTSEIYGD------PEISP--QSESYHGNVNTLGP---------RSCYDEGKRAAET 178
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L Y + G++ I R FN GPRMD P +G RV++ F +LR + +
Sbjct: 179 LFYDFRQQYGVDARIARIFNTYGPRMD-------PGDG--RVVSNFVTQVLRGDDITIYG 229
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F ++ D I+ + +I P ++ G N+GNP E T+R+LAE++ E K +
Sbjct: 230 DGSQTRSFCFVDDLIQGLCALIHLP-KSPGQPVNLGNP-EEFTIRELAEIVIEETHKDAR 287
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+ P DD +R PD+ + +Q L W P+ +L + L ST+ Y
Sbjct: 288 IVYKDLPV-------------DDPRQRRPDIRLAHQMLNWRPQFTLREGLRSTIPY---F 331
Query: 375 YAEAIKQAVAKPVAS 389
AE + + P+A+
Sbjct: 332 MAELSRNSAPSPIAA 346
>gi|440224740|ref|YP_007338136.1| UDP-glucuronic acid decarboxylase [Rhizobium tropici CIAT 899]
gi|440043612|gb|AGB75590.1| UDP-glucuronic acid decarboxylase [Rhizobium tropici CIAT 899]
Length = 354
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 165/367 (44%), Gaps = 57/367 (15%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQ 71
K TI + G GF+GSHLC++ LL+ H+++ +D ++ D + HLL E+ +
Sbjct: 33 KRRTILVAGGAGFLGSHLCDR-LLQDGHEVICVDDFSTGRMDNLWHLLRYETFS------ 85
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD + L D NLA +P Y P+ T+ + AL +++ + +
Sbjct: 86 ----FIRHDV-ISSLDLPVDEIYNLACPASPPHYQADPIRTMKTCVFGALNLLELATYHQ 140
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R+ ST E+YG D + P Y ++ FG R Y K+
Sbjct: 141 ARIFQASTSEIYG---------DPHVHPQPENYWGNVNS----FGP----RSCYDEGKRS 183
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L A +G++ I R FN GPRM P +G RV++ F L+ + +
Sbjct: 184 AETLFRDFHARHGVDIRIARIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDIT 234
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F Y+ D IE + ++ + + + N+GNP E TVR LAE + + A
Sbjct: 235 VYGDGSQTRSFCYVADLIEGFIRLMADQTTIHTPV-NLGNP-AEFTVRDLAEQVIAITAS 292
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
S P DD +R PD+T+ ++LGW P +L D L+ST+ Y
Sbjct: 293 KSKIIHKALPI-------------DDPRQRRPDITVAKRELGWEPSIALTDGLKSTIAYF 339
Query: 372 HRTYAEA 378
R A
Sbjct: 340 ERQLVRA 346
>gi|365898916|ref|ZP_09436848.1| putative sugar nucleotide dehydratase [Bradyrhizobium sp. STM 3843]
gi|365420406|emb|CCE09390.1| putative sugar nucleotide dehydratase [Bradyrhizobium sp. STM 3843]
Length = 319
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 164/353 (46%), Gaps = 53/353 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GF+GSHL ++ LLE H +L +D K LE G R +F ++H
Sbjct: 11 VLVTGGAGFLGSHLIDR-LLEQGHDVLCVDNLFTGTKRNLE--HHHGNPRFEF----LRH 63
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +++ D NLA +P Y P+ T ++ A+ ++ R++ ST
Sbjct: 64 DVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLGCRILQAST 122
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG DP+ + +E +G++ R Y K+ E L +
Sbjct: 123 SEVYG---------------DPSIHPQQES----YWGNVNPIGPRSCYDEGKRCAETLFF 163
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++GLE + R FN GPRM P++G RV++ F L+ + + L G
Sbjct: 164 DYHRQHGLEIKVARIFNTYGPRMH-------PADG--RVVSNFIIQALKGEGITLYGDGS 214
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D I ++ ++E+P G + N+GNP E T+++LA+++ E +
Sbjct: 215 QTRSFCYVDDLIGGLISLMESPDGFTGPV-NLGNP-TEFTMKELAQLII-------AETS 265
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P V+ + DD +R PD+T+ +QLGWNPK L + L+ T Y
Sbjct: 266 SSSPLVNRPLPQ------DDPKQRKPDITLAQKQLGWNPKIPLEEGLKPTTAY 312
>gi|303247596|ref|ZP_07333867.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans
JJ]
gi|302491076|gb|EFL50970.1| NAD-dependent epimerase/dehydratase [Desulfovibrio fructosovorans
JJ]
Length = 316
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 160/355 (45%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+++ E ++ LD Y +KHLL D F +
Sbjct: 7 VLVTGGAGFLGSHLCERLINEGC-DVICLDNYFTGAKQNVKHLL--------DNPHFELM 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ A+ ++ +++
Sbjct: 58 --RHDITFPLYVEV-DEIFNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLRAKIM 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG D + P Y + +P F R Y K+ E L
Sbjct: 115 QASTSEVYG---------DPSVHPQPESYW--GNVNPIGF------RSCYDEGKRCAETL 157
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ L + R FN GPRM P++G RV++ F LR +PL +
Sbjct: 158 FFDYHRQHNLRIKVARIFNTYGPRMH-------PNDG--RVVSNFIIQALRGEPLTVYGQ 208
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
GQ R+F Y+ D IEA L +++ P G I N GNP E T+ +LA+M+ E
Sbjct: 209 GQQTRSFCYVDDLIEAFLRLMDTPDDFTGPI-NTGNP-GEFTILELAKMVIEY------- 259
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S+ ++ DD +R PD+T+ +LGW PK L + L+ T+ Y
Sbjct: 260 ------TGSKSTIDYRPLPKDDPKQRRPDITLAKAKLGWEPKVPLSEGLKKTIDY 308
>gi|167590316|ref|ZP_02382704.1| NAD-dependent epimerase/dehydratase [Burkholderia ubonensis Bu]
Length = 326
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 157/360 (43%), Gaps = 58/360 (16%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRI 70
+ +I + G GF+GSHLCE+ L+ H ++ +D ++ I HL+ R+
Sbjct: 14 VNGASILITGGAGFLGSHLCER-LVSAGHDVMCVDNFHTGSKRNIAHLI--------GRV 64
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
F I+HD L L AD N+A +P Y + P+ T+ + + A+ ++
Sbjct: 65 NFE--VIRHDVWLP-LYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRC 121
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
R++ ST EVYG +Q P + +P R Y K+
Sbjct: 122 GARILQASTSEVYGDA-----------QQHPQQESYWGNVNP------NGPRACYDEGKR 164
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E L + ++G++ +VR FN GPRM G RV++ F LR +P+
Sbjct: 165 CAETLFFDYHRQHGVDIRVVRIFNTYGPRMRADDG---------RVVSNFIMQALRGEPI 215
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
L G R+F Y+ D +E ++ M++ N+GNP +E+T+R+LAE + +
Sbjct: 216 TLYGDGSQTRSFCYVDDLVEGLVRMMDQDDDTG--PMNLGNP-SEITIRELAECVLRLTG 272
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S PT DD +R PD+ Q+L W P L D L+ T+ Y
Sbjct: 273 SKSRIEYRPLPT-------------DDPLQRRPDIGRARQRLDWQPGVRLEDGLKETIAY 319
>gi|170692805|ref|ZP_02883967.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M]
gi|170142461|gb|EDT10627.1| NAD-dependent epimerase/dehydratase [Burkholderia graminis C4D1M]
Length = 343
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 160/358 (44%), Gaps = 63/358 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLE-PESQTGADRIQFHR 74
I + G GF+GSHLCE+++ + H +L +D + D I HLL+ P +
Sbjct: 9 ILVTGGAGFLGSHLCERLVTQG-HDVLCVDNFYTGTKDNIAHLLDCPNFEL--------- 58
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD +++ D NLA +P Y P+ T ++ A+ ++ R+
Sbjct: 59 --MRHDVTFPLYVEV-DQIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVKARI 115
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLI 192
ST EVYG D + KED +G + R Y K+
Sbjct: 116 FQASTSEVYG---------------DALVHPQKED----YWGHVNPIGPRSCYDEGKRCA 156
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L ++GL I R FN GPRM P++G RV++ F LR +P+ L
Sbjct: 157 ETLFMDYRRQHGLSIRIARIFNTYGPRMH-------PTDG--RVVSNFMMQALRGEPITL 207
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F Y+ D I+A + ++ N A G N+GNPH EV++R++A+ + +
Sbjct: 208 YGDGSQTRSFCYVDDMIDAFIRLM-NSADDPGGPVNLGNPH-EVSMREIAQRIVAI---- 261
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S E + DD R PD++ + LGW P+TSL D L+ T Y
Sbjct: 262 ---------TGSNSPLELHPLPTDDPWHRQPDISRARELLGWQPQTSLDDGLQHTARY 310
>gi|307726080|ref|YP_003909293.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003]
gi|307586605|gb|ADN60002.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1003]
Length = 363
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 159/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE+++ + H +L +D + D I HLL D F +
Sbjct: 9 ILVTGGAGFLGSHLCERLVTQG-HDVLCVDNFYTGTKDNIAHLL--------DCANFELM 59
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 60 --RHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVKAKIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG + P ++D Y+ P R Y K+ E L
Sbjct: 117 QASTSEVYGDAL------VHPQKED--YWGHVNPIGP---------RSCYDEGKRCAETL 159
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
++GL I R FN GPRM P++G RV++ F LR +PL L
Sbjct: 160 FMDYRRQHGLSIRIARIFNTYGPRMH-------PADG--RVVSNFMMQALRGEPLTLYGD 210
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D I+A + ++ N A G N+GNPH EV++R++AE + +
Sbjct: 211 GSQTRSFCYVDDMIDAFIRLM-NCADDPGGPVNLGNPH-EVSMREIAERIVAI------- 261
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S E + DD R PD++ + LGW P+TSL + LE T Y
Sbjct: 262 ------TGSNSPLELHPLPTDDPWHRQPDISRARELLGWQPQTSLDEGLEQTARY 310
>gi|251798149|ref|YP_003012880.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2]
gi|247545775|gb|ACT02794.1| NAD-dependent epimerase/dehydratase [Paenibacillus sp. JDR-2]
Length = 325
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 162/364 (44%), Gaps = 45/364 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL---N 76
I + G GFIGSHL E LL H + LD +++ PE HRL +
Sbjct: 3 ILVTGGAGFIGSHLVES-LLAAGHTVWTLDDFSNG-----RPEFLAHLSNHPRHRLIEGS 56
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ ++ + D +LAA+ + P+ I N +++ + ++I
Sbjct: 57 VLDRKLVKKCMSHVDTVYHLAAVLGVKNTVEDPIKVIEGNIDGTRNILELAYPSRTKVIF 116
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST E+YGK LP + + S ++G+ RWSYA AK + E +
Sbjct: 117 ASTSEIYGKN--EKLPFN--------------EMSDRVYGAPSIHRWSYATAKSIDEHMC 160
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+A A+ GL T++R FN GPR + V+A F L+ +PL++ G
Sbjct: 161 FAYAAK-GLPVTVLRYFNAYGPRQT--------NSQYGGVVARFITAALKGEPLEVYGSG 211
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+R F ++ D + + + A+G FNVG+ H+ VT+ QLA+++ ++ S
Sbjct: 212 TQRRCFTFVDDTVSGTIAALS--PEADGLAFNVGSTHS-VTIIQLAQLIIQLSRSTS--- 265
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT-YQHRTY 375
P + S E YG GY+D R PD+T LG+ P SL L T+ Y+ R
Sbjct: 266 ----PVILKSYAEAYGPGYEDMPAREPDLTRAETILGYKPSVSLEQGLIKTIEWYRERIS 321
Query: 376 AEAI 379
E +
Sbjct: 322 LETV 325
>gi|168048393|ref|XP_001776651.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671943|gb|EDQ58487.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 436
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 162/355 (45%), Gaps = 63/355 (17%)
Query: 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ 71
G P KP+ I + G GF+GSHL ++ L+E ++ +D + K ++ G R +
Sbjct: 114 GLPRKPLRIVVTGGAGFVGSHLVDR-LIERGDSVIVVDNFFTGRKENVQ--HHFGNPRFE 170
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD +E L+ D +LA +P Y P+ TI +N + L ++
Sbjct: 171 L----IRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPIKTIKTNVVGTLNMLGLAKRIG 225
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAK 189
R + ST EVYG DP + KE +G++ R Y K
Sbjct: 226 ARFLLTSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGVRSCYDEGK 266
Query: 190 QLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247
+ E L Y GAE ++ I R FN GPRM G RV++ F LR+
Sbjct: 267 RTAETLAMDYHRGAE--VQVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRK 315
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMM 305
+P+ + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LAE++
Sbjct: 316 EPMTVYGDGKQTRSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELAEVV 369
Query: 306 TEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
EV +P+ + KE DD KR PD++ + LGW PK SL
Sbjct: 370 KEVI----------DPSATIEYKE---NTSDDPHKRKPDISKAKELLGWEPKISL 411
>gi|282165390|ref|YP_003357775.1| putative nucleotide sugar epimerase/dehydratase [Methanocella
paludicola SANAE]
gi|282157704|dbj|BAI62792.1| putative nucleotide sugar epimerase/dehydratase [Methanocella
paludicola SANAE]
Length = 319
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 156/358 (43%), Gaps = 60/358 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHR 74
T + G GFIGSHLCE LL +++A+D D IK +L S T
Sbjct: 3 TSVVTGGAGFIGSHLCE-YLLGKGDRVIAIDNLGSGSKDNIKGILNNASFT--------- 52
Query: 75 LNIKHDSRLEGLIK-MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
IKHD R ++ D NLA+ +P D++ P++ + +N + V E+ R
Sbjct: 53 -FIKHDVRKPLKVREKVDYVYNLASRASPVDFDRYPVEIMMTNSVGTYNAVNAALEHGAR 111
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
+ ST E YG P SP Q Y+ P R Y +K+ E
Sbjct: 112 FLTASTSETYGD------PDVSP--QPETYWGHVNPVGP---------RSCYDESKRFSE 154
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L A GL+ I+R FN GPRM G RV+ F L +PL +
Sbjct: 155 ALTMAFVRHQGLDGRIIRIFNTYGPRMRLDDG---------RVVPNFVTQALAGRPLTVY 205
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D + + LM+ +P + G + N+GNP E+TV + A + E K
Sbjct: 206 GDGSQTRSFCYVSDLVRGIYLMMHSPVK--GQVVNLGNPR-EMTVLEFARTIIE---KTG 259
Query: 314 GEAALE-EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+A++ P + +D +R PD+ + LGW P+ L + LEST+ +
Sbjct: 260 SSSAIDYRPLPE-----------NDPLQRRPDIRKAKELLGWEPEVGLDEGLESTIAW 306
>gi|344342222|ref|ZP_08773122.1| UDP-glucuronate decarboxylase [Thiocapsa marina 5811]
gi|343797895|gb|EGV15869.1| UDP-glucuronate decarboxylase [Thiocapsa marina 5811]
Length = 320
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 164/368 (44%), Gaps = 65/368 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE++L + H ++ LD + D I HLLE + L
Sbjct: 9 ILVTGGAGFLGSHLCERLLADG-HDVICLDNFFTGTKDNIAHLLESP---------YFEL 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 59 -MRHDVTFPLYVEV-DEIYNLACPASPIHYQFDPVQTTKTSVHGAINMLGLAKRVKAKIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG D + P +Y +G + R Y K+ E
Sbjct: 117 QASTSEVYG---------DPAIHPQPEHY----------WGHVNPIGPRSCYDEGKRCAE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++G+ + R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 158 TLFFDYRRQHGMRIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALRNKPITIY 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++ +P G + N+GNP E T+ +LA+ + E+ S
Sbjct: 209 GEGTQTRSFCYVDDLIEGFIRLMNSPDDLTGPV-NLGNP-GEFTMIELAQTILELTGSRS 266
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P DD +R PD+ + +Q LGW PK L + LE T+ Y
Sbjct: 267 QLVHEALPQ-------------DDPKQRKPDIGLAHQHLGWEPKIPLREGLEPTIAY--- 310
Query: 374 TYAEAIKQ 381
+A+ +K+
Sbjct: 311 -FADLLKR 317
>gi|150375823|ref|YP_001312419.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419]
gi|150030370|gb|ABR62486.1| NAD-dependent epimerase/dehydratase [Sinorhizobium medicae WSM419]
Length = 348
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 168/372 (45%), Gaps = 59/372 (15%)
Query: 5 SVRLDLDGRPIKPV--TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
+V D D P + + +I + G GF+GSHLCE +LL H+++ LD ++ ++ + P
Sbjct: 14 NVHEDRDALPRRSIQKSILVTGGAGFLGSHLCE-LLLSAGHEVICLDNFSTGLRRNIAPL 72
Query: 63 SQTGADRIQFHRLNIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFI 118
+ R+ I HD ++ DL + NLA +P Y P+ T + I
Sbjct: 73 KRYDTFRV------IAHD-----IVDPIDLEVDEIYNLACPASPPHYQADPIQTTKTCVI 121
Query: 119 DALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSI 178
+L ++ + R+ ST E+YG P+ P Q +Y+ P
Sbjct: 122 GSLNLLDLAARRGARIFQASTSEIYGD------PQVHP--QVESYWGNVNSFGP------ 167
Query: 179 EKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238
R Y K+ E L + +G+E IVR FN GPRM P +G RV++
Sbjct: 168 ---RSCYDEGKRCAETLFFDYQKVHGVETKIVRIFNTYGPRMR-------PDDG--RVVS 215
Query: 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTV 298
F L+ + + + G R+F ++ D I+ + ++ +PA G + N+GNP E T+
Sbjct: 216 NFIVQALKGENITIYGDGSQTRSFCFVDDLIDGFVRLMGSPASLTGPV-NLGNP-TEFTI 273
Query: 299 RQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
+LA+ + + S L P DD +R PD+++ ++LGW PK
Sbjct: 274 GELADEVIRLTNSRSKIVRLPLPV-------------DDPRQRRPDISLATKELGWRPKV 320
Query: 359 SLWDLLESTLTY 370
+L + L T+ Y
Sbjct: 321 NLAEGLAQTIRY 332
>gi|94970640|ref|YP_592688.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter
versatilis Ellin345]
gi|94552690|gb|ABF42614.1| NAD-dependent epimerase/dehydratase [Candidatus Koribacter
versatilis Ellin345]
Length = 332
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 161/350 (46%), Gaps = 43/350 (12%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
+ G GFIGSHL EK+L + D+ I ++ +S + +H I +
Sbjct: 5 ITGGAGFIGSHLAEKLLSRGDEVHIIDDLSTGTIANIQHLKS---SPLFHYHIDTITNQR 61
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
+ L+ + D+T +LAA P+ T+ +N V+ KR++ ST E
Sbjct: 62 LMTELVDLCDITYHLAAAVGVRLIVESPVRTMETNIRGTEIVLALAERKRKRVLITSTSE 121
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYGK + P R+D I G K RWSYAC+K + E L A
Sbjct: 122 VYGKR------EHIPFRED----------DDLIMGPTSKGRWSYACSKAIDEFLAIAYWK 165
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
E + IVR FN +GPR G+ V+ L + + + G R
Sbjct: 166 EKKVPTVIVRLFNTVGPRQTGRYGM---------VIPNLVTQALTGEDMTVFGDGLQARC 216
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLA---EMMTEVYAKVSGEAAL 318
F ++ D++ +++ + +P ANG ++N+G E+T+ LA +++T+ +K+
Sbjct: 217 FTHVSDSVNSIVQIAAHP-NANGEVYNIGT-QEEITILDLARRIKLLTDSDSKI------ 268
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
V V ++ Y EG++D +R+PD+T ++ +G+ P+ +L + L S +
Sbjct: 269 ----VFVPYEKAYEEGFEDMMRRVPDLTKAHKLIGYRPRVALDETLRSII 314
>gi|167588817|ref|ZP_02381205.1| NAD-dependent epimerase/dehydratase [Burkholderia ubonensis Bu]
Length = 307
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 156/355 (43%), Gaps = 49/355 (13%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
M G GF+GSHLCE+ L+E H +L +D Y K + + G R + ++HD
Sbjct: 1 MTGGAGFLGSHLCER-LVELGHDVLCVDNYFTGTKQNVA--ALLGNPRFE----ALRHDV 53
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
+++ D NLA +P Y P+ T ++ + A+ ++ + R++ ST E
Sbjct: 54 TFPLYVEV-DEIYNLACPASPIHYQFDPVQTTKTSVMGAINMLGLAKRTHARVLQTSTSE 112
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYG D + P Y + + +P R Y K+ E L +
Sbjct: 113 VYG---------DPDVHPQPESY--RGNVNPL------GPRACYDEGKRCAETLFFDYHR 155
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
+ + +VR FN GPRM P++G RV++ F LR + + L G R
Sbjct: 156 QQNVRIKVVRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEDITLYGDGSQTRA 206
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321
F Y+ D +E ++ M+ PA G I N+GNPH E+ V +LA+++ +
Sbjct: 207 FCYVDDMVEGLIRMMATPADVTGPI-NLGNPH-EIAVSELAQIILRL------------- 251
Query: 322 TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376
T S F+ DD +R PD+ + QL W P L L T+ Y T A
Sbjct: 252 TGSKSRIVFHPLPKDDPTQRCPDIGLARAQLDWKPTVGLEAGLRRTIDYFRSTMA 306
>gi|390569446|ref|ZP_10249731.1| NAD-dependent epimerase/dehydratase [Burkholderia terrae BS001]
gi|389938306|gb|EIN00150.1| NAD-dependent epimerase/dehydratase [Burkholderia terrae BS001]
Length = 313
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 166/369 (44%), Gaps = 66/369 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHR 74
++ + G GF+GSHLC++ L+ H ++ +D ++ I HL+ ++ F
Sbjct: 5 SVLITGGAGFLGSHLCDR-LVAAGHDVMCVDNFHTGSKQTIHHLI--------GKVNFEV 55
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD L L AD N+A +P Y + P+ T+ + + A+ ++ R+
Sbjct: 56 --IRHDVWLP-LYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRCGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLI 192
+ ST EVYG D+ P Y +G++ R Y K+
Sbjct: 113 LQASTSEVYG---------DAQQHPQPETY----------WGNVNPNGPRACYDEGKRCA 153
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L + ++G++ I R FN GPRM P +G RV++ F L+ +P+ L
Sbjct: 154 ETLFFDYHRQHGVDIRIARIFNTYGPRMR-------PDDG--RVVSNFIMQALQGEPITL 204
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F Y+ D +E ++ ++++ FN+GNP +E+T+R+LAE + +
Sbjct: 205 YGNGSQTRSFCYVDDLVEGLMRLMDHEGEPGP--FNIGNP-SEITIRELAETVLRL---- 257
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
T S E+ DD +R PD+T L W P L D L+ T+ Y
Sbjct: 258 ---------TGSRSRIEYRPLPSDDPVQRRPDITKARAHLDWEPGVMLEDGLKETIAY-- 306
Query: 373 RTYAEAIKQ 381
+ + +KQ
Sbjct: 307 --FKKVVKQ 313
>gi|222081304|ref|YP_002540667.1| dTDP-glucose 4 [Agrobacterium radiobacter K84]
gi|398376831|ref|ZP_10535013.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. AP16]
gi|221725983|gb|ACM29072.1| dTDP-glucose 4 [Agrobacterium radiobacter K84]
gi|397728025|gb|EJK88449.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. AP16]
Length = 337
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 161/361 (44%), Gaps = 61/361 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHR 74
I + G GF+GSHLCE++LLE H+++ +D ++ + ++HLL D F
Sbjct: 19 VILVAGGAGFLGSHLCERLLLEG-HEVICVDDFSTGRMENMRHLLR------FDTFSF-- 69
Query: 75 LNIKHDSRLEGLIKM-ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
I+HD + G I + D NLA +P Y P+ T+ + +L +++ + + R
Sbjct: 70 --IRHD--IIGSIDLPVDEIYNLACPASPQHYQADPIHTLKTCVFGSLNLLELAAHHQAR 125
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
+ ST E+YG P+ P Q Y+ P R Y K+ E
Sbjct: 126 IFQASTSEIYGD------PQVHP--QPEGYWGHVNSFGP---------RSCYDEGKRSAE 168
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L Y + G++ I R FN GPRM P +G RV++ F L+ Q + +
Sbjct: 169 TLFYDFHKKYGVDIRIARIFNTYGPRMR-------PDDG--RVVSNFIVQALKGQDITIY 219
Query: 254 DGGQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F Y+ D IE LM PA N+GNP E ++R LAE + +
Sbjct: 220 GDGSQTRSFCYVDDLIEGFTRLMRSQPAIHTP--VNLGNP-TEFSIRNLAEQVVAMTGSP 276
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
S P DD +R PD+T+ ++L W P +L D L+ST++Y
Sbjct: 277 SKIVYQPLPV-------------DDPRQRRPDITVAKRELKWEPSVALADGLKSTVSYFE 323
Query: 373 R 373
R
Sbjct: 324 R 324
>gi|262193621|ref|YP_003264830.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM
14365]
gi|262076968|gb|ACY12937.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM
14365]
Length = 321
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 165/353 (46%), Gaps = 49/353 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHLCE++L T + ++ LD + + L + RI+ R ++
Sbjct: 7 ILITGGAGFIGSHLCERLL--TDNDVVVLDTFR---RDALSSTGLSEHPRIRVVRGDVLD 61
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHF 137
+ + + D I++A+I P+ T+ + + +++ E+ KR I F
Sbjct: 62 AATVADAMAGCDAVIHMASIAGVDTVMRNPVLTMRIAMLGTMNLLEAARESGEVKRFIDF 121
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EV+G+ AY V + D++ + G++ + RW+YA AK E L
Sbjct: 122 STSEVFGRY---------------AYQVTEFDST--VLGAVGEARWTYAVAKLATEHLAM 164
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
E GL +RPFN GPR EG + F L + L++ + G
Sbjct: 165 NYQKEFGLPACSIRPFNIYGPRQ--------VGEG---AIHHFIRRALTGETLQVHNDGA 213
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R + YI D ++A+LL +E ++ GH FN+GNP + VT+ QLA + ++SG +
Sbjct: 214 QIRAWCYIDDIVDAILLALERE-QSVGHAFNIGNPRSTVTIYQLARDIV----RLSGSS- 267
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S+ EF+ + D + R+P + + LG+ + L L+ T+ +
Sbjct: 268 --------SAIEFHPWPHPDVEIRVPAVAKARELLGFEAQVDLEQGLKRTIAW 312
>gi|430763097|ref|YP_007218954.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
nitratireducens DSM 14787]
gi|430012721|gb|AGA35473.1| NAD-dependent epimerase/dehydratase [Thioalkalivibrio
nitratireducens DSM 14787]
Length = 320
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 155/353 (43%), Gaps = 57/353 (16%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GSHLCE+ LLE +L +D + D I HLL H I
Sbjct: 11 VTGGAGFLGSHLCER-LLERGDDVLCVDNFFTGTKDNIVHLLNNP----------HFELI 59
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD +++ ++ NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 60 RHDVTFPLYVEVGEI-YNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVKAKIFQA 118
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EVYG P+ P Q+ Y+ P R Y K+ E L +
Sbjct: 119 STSEVYGD------PEIHP--QEKTYWGRVNPIGP---------RACYDEGKRCAEPLFF 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++ L + R FN GPRM P++G RV++ F L +P+ L G
Sbjct: 162 DYHRQHALRIKVARMFNTYGPRMH-------PNDG--RVVSNFIVQALNNRPITLYGDGS 212
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ L ++++P G + N+GNP E +VRQLAE + E+ S
Sbjct: 213 QTRSFCYVSDMVDGFLRLMDSPDDVTGPV-NLGNP-VEFSVRQLAEQIIELAGSSSDLIL 270
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ +QLGW P L L++T+ Y
Sbjct: 271 QHLPQ-------------DDPRQRPPDITLAREQLGWEPAIQLRTGLKATIAY 310
>gi|384252365|gb|EIE25841.1| UDP-D-glucuronic acid decarboxylase [Coccomyxa subellipsoidea
C-169]
Length = 343
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 159/365 (43%), Gaps = 58/365 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLLEPESQTGADRIQFHRLN 76
+ + G GF+GSHLC ++ H I + + + + HLL G +
Sbjct: 28 VLVTGGAGFVGSHLCTYLVERGDHVICVDNFFTGSKENVAHLL------GKTNFEL---- 77
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
I+HD +E L+ D +LA +P Y P+ TI ++FI + ++ R +
Sbjct: 78 IRHDV-VEKLLLEVDQIYHLACPASPVHYKYNPIKTIKTSFIGTMNMLGLAKRTRARFLL 136
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG P + P Q Y+ CI +R Y K+ E L
Sbjct: 137 TSTSEVYGD------PLEHP--QTEGYW----GNVNCI-----GERSCYDEGKRAAECLT 179
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+ E+ LE +VR FN GP M G RV++ F L QPL + G
Sbjct: 180 FDYQREHNLEVRVVRIFNTYGPHMALDDG---------RVVSNFVAQALTGQPLTIYGDG 230
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
Q R+F Y+ D +E ++ +++ P FN+GNP E T+ +LA+++ EV
Sbjct: 231 QQTRSFQYVSDLVEGMVRVMDGPYTGP---FNIGNP-TEFTMLELAQVVKEVV------- 279
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT-YQHRTY 375
P + KE DD +R PD++ + LGW PK +L + L ++ + R
Sbjct: 280 ---NPDAQIVYKE---NTADDPSRRKPDISKAKKALGWEPKVALREGLSRMVSDFAKRLG 333
Query: 376 AEAIK 380
EA K
Sbjct: 334 VEAPK 338
>gi|115525494|ref|YP_782405.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
gi|115519441|gb|ABJ07425.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
Length = 323
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 153/355 (43%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLC+ L+ +++ LD + ++HLLE R
Sbjct: 5 ILVCGGAGFLGSHLCDT-LISGGDRVICLDNFQTGSRRNVRHLLE-----------HPRF 52
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+ ++ + D NLA +P Y P+ TI ++ + AL +V RL+
Sbjct: 53 KVVTADVVDPVDFKVDRIYNLACPASPPRYQDDPIRTIRTSVLGALNLVALAERTGARLL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG DP + E+ + S R Y K+ E +
Sbjct: 113 QASTSEVYG---------------DPELHPQTEEYRGNV--SFVGPRACYDEGKRCAETV 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
++ + + R FN GP MD G RV++ F+ LR +P+ +
Sbjct: 156 LFDAARAGRADVRVARIFNTYGPNMDVADG---------RVVSNFAVQALRNEPISVYGK 206
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D I+ ++ ++E+P G + N+GNP NE+TV +LA ++ ++ S
Sbjct: 207 GDQTRSFCYVTDLIDGLVRLMEHPGDLPGAV-NLGNP-NEMTVIELARLIIDLTGSRSRV 264
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L P DD +R PD+ + LGW P T+L + L T+ Y
Sbjct: 265 VHLPLPK-------------DDPTRRRPDIARAGRYLGWRPTTNLVEGLAMTIGY 306
>gi|334364710|ref|ZP_08513690.1| NAD dependent epimerase/dehydratase family protein [Alistipes sp.
HGB5]
gi|390946586|ref|YP_006410346.1| nucleoside-diphosphate-sugar epimerase [Alistipes finegoldii DSM
17242]
gi|313159086|gb|EFR58461.1| NAD dependent epimerase/dehydratase family protein [Alistipes sp.
HGB5]
gi|390423155|gb|AFL77661.1| nucleoside-diphosphate-sugar epimerase [Alistipes finegoldii DSM
17242]
Length = 319
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 163/358 (45%), Gaps = 61/358 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLE-PESQTGADRIQFHR 74
I + G GFIGSHLCE++L E + ++ +D Y I+HLL+ P +
Sbjct: 4 ILISGGAGFIGSHLCERLLKEG-NDVICIDNYFTGHKSNIRHLLKHPNFEV--------- 53
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD + ++ ++ NLA +P Y P+ T ++ I A+ ++ + N+ ++
Sbjct: 54 --IRHDIVYPYMAEVEEI-YNLACPASPIYYQHDPIKTTQTSVIGAMNMLAIANRNHAKI 110
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG + P+D +P R Y K+ E
Sbjct: 111 LQASTSEVYGDPLIHPQPEDYWGHVNPL-----------------GLRSCYDEGKRCAES 153
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + E+G+ IVR FN GP+MD G RV++ F LR + + +
Sbjct: 154 LFMSYYREHGVPVKIVRIFNTYGPKMDINDG---------RVVSNFIVQALRGEQITIYG 204
Query: 255 GGQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G+ R+F YI D IE +L +M P G + N+GNP NE T+ +LA ++ E+ S
Sbjct: 205 NGEQTRSFQYIDDLIEGMLRMMTATPDDFTGPV-NIGNP-NEFTISELAHIVLELTGSKS 262
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLG-WNPKTSLWDLLESTLTY 370
+ P+ DD +R PD+T+ ++ LG W P L D L T+ Y
Sbjct: 263 KIIRMPLPS-------------DDPQQRKPDITLAHKMLGDWEPTIQLRDGLLKTIAY 307
>gi|220904053|ref|YP_002479365.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868352|gb|ACL48687.1| NAD-dependent epimerase/dehydratase [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 318
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 164/352 (46%), Gaps = 51/352 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN-IK 78
I + G GF+GSHLCE++L E H++L +D + + +E D + R I+
Sbjct: 7 ILVTGGSGFLGSHLCERLLNEG-HEVLCVDNFFSSARANVE-------DFLDNRRFELIR 58
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
HD +++ D NLA +P Y P+ TI + A+ ++ R+ S
Sbjct: 59 HDVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTIKTCVHGAINMLGLAKRLKARIYQAS 117
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P+ P +D +V C Y K+ E L ++
Sbjct: 118 TSEVYGD------PEIHPQTEDYWGHVNPNGIRSC-----------YDEGKRCAEALFFS 160
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+ GL + R FN GP+M P++G RV++ F L+ QP+ + G
Sbjct: 161 YWRQGGLPIKVGRIFNTYGPKMH-------PNDG--RVVSNFIIQALKGQPITIYGDGSQ 211
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+F Y+ D IE ++ + +P G + N+GNP E T+R+LAE + ++ +G ++
Sbjct: 212 TRSFCYVDDLIECMVRFMASPEDFIGPM-NMGNP-GEFTIRELAEKVVDM----TGSKSV 265
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+S + G DD +R PD+T+ ++LGW P+ L D L+ T+ Y
Sbjct: 266 ------ISYEPLPG---DDPKQRRPDITLAREKLGWEPQVKLEDGLKKTIAY 308
>gi|190410051|ref|YP_001965575.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium
meliloti SM11]
gi|125631081|gb|ABN47082.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium
meliloti SM11]
Length = 348
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 168/372 (45%), Gaps = 59/372 (15%)
Query: 5 SVRLDLDGRPIKPV--TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPE 62
+V D D P + + +I + G GF+GSHLCE +LL H+++ LD ++ ++ + P
Sbjct: 14 NVNEDRDALPRRSIQKSILVTGGAGFLGSHLCE-LLLGAGHEVICLDNFSTGLRRNIAPL 72
Query: 63 SQTGADRIQFHRLNIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFI 118
+ R+ I HD ++ DL + NLA +P Y P+ T + I
Sbjct: 73 KRYDTFRV------IAHD-----IVDPIDLEVDEIYNLACPASPPHYQADPIQTTKTCVI 121
Query: 119 DALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSI 178
+L ++ + R+ ST E+YG P+ P Q +Y+ P
Sbjct: 122 GSLNLLDLAARRGARIFQASTSEIYGD------PQVHP--QVESYWGNVNSFGP------ 167
Query: 179 EKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLA 238
R Y K+ E L + +G+E IVR FN GPRM P +G RV++
Sbjct: 168 ---RSCYDEGKRCAETLFFDYQKVHGVETKIVRIFNTYGPRMR-------PDDG--RVVS 215
Query: 239 CFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTV 298
F L+ + + + G R+F ++ D I+ + ++ +PA G + N+GNP E T+
Sbjct: 216 NFIVQALKGENITIYGDGSQTRSFCFVDDLIDGFVRLMGSPASLTGPV-NLGNP-TEFTI 273
Query: 299 RQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
+LA+ + + S L P DD +R PD+++ ++LGW PK
Sbjct: 274 GELADEVIRLTNSRSKIVRLPLPV-------------DDPRQRRPDISLATKELGWRPKV 320
Query: 359 SLWDLLESTLTY 370
+L + L T+ Y
Sbjct: 321 NLAEGLAQTIRY 332
>gi|115524680|ref|YP_781591.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
gi|115518627|gb|ABJ06611.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisA53]
Length = 331
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 168/371 (45%), Gaps = 62/371 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC++++ E ++L +D Y I HLL +R F L
Sbjct: 16 ILVTGGAGFIGSHLCDRLIKEG-QEVLCIDNYYTGRRQNIAHLL--------NRPGFETL 66
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD L +++ D NLA +P Y P+ T+ ++ A+ ++ + R+
Sbjct: 67 --RHDVTLPLYVEI-DQIYNLACPASPVHYQFDPVQTLKTSVHGAINMLGLAKRTHARIF 123
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DPA + E +G++ R Y K+ E
Sbjct: 124 QASTSEVYG---------------DPAVHPQPE----TYWGNVNPLGTRACYDEGKRAAE 164
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ + + R FN GPRM P++G RV++ F L+ +P+ L
Sbjct: 165 ALFFDYRRQHRVAIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALQNRPITLY 215
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F ++ D ++A++ ++ P +G + N+GNP E T+ QLAEM+ +
Sbjct: 216 GDGSQTRSFCHVSDLVDAIVRLMATPDDVSGPV-NLGNP-AEFTILQLAEMVIAL----- 268
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD-LLESTLTYQH 372
T S EF DD +R PD+ + LGW P +L D L+E+ ++H
Sbjct: 269 --------TGSRSKVEFRPLPPDDPRQRRPDIALARSLLGWQPTIALADGLMETIGYFRH 320
Query: 373 RTYAEAIKQAV 383
IK AV
Sbjct: 321 CLGVPEIKVAV 331
>gi|53804727|ref|YP_113634.1| NAD-dependent epimerase/dehydratase [Methylococcus capsulatus str.
Bath]
gi|53758488|gb|AAU92779.1| NAD-dependent epimerase/dehydratase family protein [Methylococcus
capsulatus str. Bath]
Length = 320
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 155/355 (43%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE LL H +L +D + D I HLL G +
Sbjct: 9 ILVTGGAGFLGSHLCES-LLGLGHDVLCVDNFFTGSRDNILHLL------GNPHFEL--- 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 59 -LRHDVTFPLYVEV-DEIYNLACPASPIHYQFDPVQTTKTSVHGAINMLGLAKRVKAKIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P +D +V C Y K+ E L
Sbjct: 117 QASTSEVYGD------PEVHPQTEDYVGHVNPIGPRSC-----------YDEGKRCAETL 159
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ L + R FN GPRM P++G RV++ F L+ QP+ L
Sbjct: 160 FFDYRRQHNLSIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALKGQPITLYGD 210
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R+F Y+ D IE + ++++P G + N+GNP E T+RQLAE + E+ S
Sbjct: 211 GEQTRSFCYVSDLIEGFIRLMDSPDDFTGPV-NLGNP-GEFTIRQLAEKIIEMTGSSSKL 268
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ ++L W P L + L T+TY
Sbjct: 269 VYQPLPV-------------DDPRQRRPDITLAKEKLDWEPTIHLEEGLVHTITY 310
>gi|395212577|ref|ZP_10399850.1| nad-dependent epimerase/dehydratase [Pontibacter sp. BAB1700]
gi|394457094|gb|EJF11287.1| nad-dependent epimerase/dehydratase [Pontibacter sp. BAB1700]
Length = 321
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 165/375 (44%), Gaps = 67/375 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLLEPESQTGADRIQFHRLN 76
+ + G GF+GSHLC++ + E H I ++ + I+HL + E + +F+ +
Sbjct: 6 VLVTGGAGFLGSHLCDRFIAEGYHVIAMDNLITGNLENIEHLFKLE------QFEFYHHD 59
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ + G + D ++ A+ +P DY P+ T+ + ++ R++
Sbjct: 60 VSKFVHVPGEL---DYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLAKAKGARMLI 116
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIER 194
ST EVYG DP + ED +G++ R Y AK+ E
Sbjct: 117 ASTSEVYG---------------DPLVHPQNED----YWGNVNPVGPRGCYDEAKRFQEA 157
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+ A +GLE IVR FN GPRM G RVL F + LR +PL +
Sbjct: 158 MTMAYHMHHGLETRIVRIFNTYGPRMRLDDG---------RVLPAFLSQALRGEPLSIFG 208
Query: 255 GGQSQRTFIYIKDAIEAV--LLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F Y+ D +E + LL+ + P + NVGNP +E+T+RQ AE E+
Sbjct: 209 DGSQTRSFCYVDDLVEGIYRLLLSDYP-----YPVNVGNP-SEITIRQFAE---EICRLT 259
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
E +E + DD KR PD++ + LGW PK + L+ TL Y
Sbjct: 260 GAELNIEYQPLPT----------DDPQKRQPDISKAKEVLGWEPKVDRAEGLQRTLEY-- 307
Query: 373 RTYAEAIKQAVAKPV 387
+ E +K V + V
Sbjct: 308 --FKEKVKLPVERVV 320
>gi|323529644|ref|YP_004231796.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001]
gi|407710479|ref|YP_006794343.1| dTDP-glucose 4,6-dehydratase [Burkholderia phenoliruptrix BR3459a]
gi|323386646|gb|ADX58736.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1001]
gi|407239162|gb|AFT89360.1| dTDP-glucose 4,6-dehydratase [Burkholderia phenoliruptrix BR3459a]
Length = 335
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 158/356 (44%), Gaps = 59/356 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLE-PESQTGADRIQFHR 74
I + G GF+GSHLCE+++ + H +L +D + D I HLL+ P +
Sbjct: 9 ILVTGGAGFLGSHLCERLVTQG-HDVLCVDNFYTGTKDNIAHLLDCPNFEL--------- 58
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 59 --MRHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVKAKI 115
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
ST EVYG + P ++D Y+ P R Y K+ E
Sbjct: 116 FQASTSEVYGDALVH------PQKED--YWGHVNPIGP---------RSCYDEGKRCAET 158
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L ++GL I R FN GPRM P++G RV++ F LR +PL L
Sbjct: 159 LFMDYRRQHGLSIRIARIFNTYGPRMH-------PADG--RVVSNFMMQALRGEPLTLYG 209
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D I+A + ++ G + N+GNPH EV++R++AE + +
Sbjct: 210 DGSQTRSFCYVDDMIDAFIRLMNTDEDPGGPV-NLGNPH-EVSMREIAERIVAI------ 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S E + DD R PD++ + LGW P T+L D LE T Y
Sbjct: 262 -------TGSSSPLELHPLPTDDPWHRQPDISRARELLGWQPHTALDDGLEQTARY 310
>gi|186477741|ref|YP_001859211.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815]
gi|184194200|gb|ACC72165.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815]
Length = 313
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 158/356 (44%), Gaps = 58/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHR 74
++ + G GF+GSHLC++ L+ H ++ +D ++ I HL+ ++ F
Sbjct: 5 SVLITGGAGFLGSHLCDR-LVAAGHDVMCVDNFHTGSKQTIHHLI--------GKVNFEV 55
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD L L AD N+A +P Y + P+ T+ + + A+ ++ R+
Sbjct: 56 --IRHDVWLP-LYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRCGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG +Q P + +P R Y K+ E
Sbjct: 113 LQASTSEVYGDA-----------QQHPQRETYWGNVNP------NGPRACYDEGKRCAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++G++ I R FN GPRM P +G RV++ F L +P+ L
Sbjct: 156 LFFDYHRQHGVDIRIARIFNTYGPRMR-------PDDG--RVVSNFIMQALHGEPITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ ++ + FN+GNP E+T+R+LAEM+ +
Sbjct: 207 DGSQTRSFCYVDDLVEGLMRLMNHEGEPG--PFNIGNP-GEITIRELAEMVLRL------ 257
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S ++ DD +R PD+ + L W P +L D L+ T+ Y
Sbjct: 258 -------TGSRSRIQYRPLPPDDPVQRRPDIAKAREHLDWQPGVALEDGLKETIAY 306
>gi|424879417|ref|ZP_18303049.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392515780|gb|EIW40512.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 340
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 155/356 (43%), Gaps = 57/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
T+ + G GGF+GSHLCE+ LL+ H+++ LD ++ + HL A +FH
Sbjct: 24 TVLVNGGGGFLGSHLCER-LLQRGHRVICLDNFSTGRRANVDHL--------ASNTRFH- 73
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD R I A L N A+ +P DY P+ T+ +N + A+ + + +
Sbjct: 74 -IVEHDVRQPFDID-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDCARKTGAIV 131
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P SP Q +Y P R Y K+ E
Sbjct: 132 VQSSTSEVYGD------PIHSP--QHESYCGNVNQIGP---------RGCYDEGKRSAET 174
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + G++ + R FN GPRM G RV++ F LR L +
Sbjct: 175 LFFDYHRTYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNADLTIYG 225
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GQ R+F Y+ D IE L NG I N+GNP E+TVR+LAE++ ++ S
Sbjct: 226 DGQQTRSFCYVDDLIEGFLRFSVAGNACNGPI-NLGNPA-EMTVRRLAEIIRDLTNSRSR 283
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L T DD +R PD++ +L W P+ L L T+ Y
Sbjct: 284 IVHLPAVT-------------DDPRQRRPDISRAMAELDWQPRIGLETGLARTVDY 326
>gi|317968570|ref|ZP_07969960.1| dTDP-glucose 4-6-dehydratase-like protein [Synechococcus sp.
CB0205]
Length = 313
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 51/349 (14%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
+ G GF+GSHL ++ L++ +++ LD Y K +EP G R + R ++
Sbjct: 10 VTGGAGFVGSHLVDR-LMQAGEEVICLDNYFTGRKQNIEP--WLGHPRFELIRHDVTDPI 66
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
RLE D +LA +P Y P+ T ++F+ ++ RL+ ST E
Sbjct: 67 RLE-----VDRIWHLACPASPVHYQHNPIKTAKTSFLGTYNMLGLARRVGARLLLASTSE 121
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYG DP + E C+ + R Y K++ E L +
Sbjct: 122 VYG---------------DPEVHPQPESYRGCV--NTIGIRSCYDEGKRIAETLCFDYQR 164
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
+G+E +VR FN GPRM P +G RV++ F LR PL L G R+
Sbjct: 165 MHGVEIRVVRIFNTYGPRML-------PDDG--RVVSNFIVQALRGDPLTLYGDGSQTRS 215
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321
F ++ D +E ++ ++ A+ N+GNP E T+RQLAE+ V AK++ P
Sbjct: 216 FCFVDDLVEGIIRLMNG---AHPGPINIGNP-GEFTIRQLAEL---VRAKIN-------P 261
Query: 322 TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
++++ K DD +R P + + Q+LGW P +L L++T+ Y
Sbjct: 262 SLELICKPL---PQDDPLQRQPVINLAQQELGWQPTIALDRGLDATIAY 307
>gi|399075168|ref|ZP_10751416.1| nucleoside-diphosphate-sugar epimerase [Caulobacter sp. AP07]
gi|398039464|gb|EJL32599.1| nucleoside-diphosphate-sugar epimerase [Caulobacter sp. AP07]
Length = 321
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 163/365 (44%), Gaps = 62/365 (16%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GSHLCE LL H++L +D + I HLL R + R +I
Sbjct: 7 VTGGAGFLGSHLCEA-LLARGHEVLCVDNFFTGRRGNIAHLLS------HPRFELLRHDI 59
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+E D NLA +P Y P+ T ++ I A+ ++ +++
Sbjct: 60 TFPLYVE-----VDEIYNLACPASPVHYQFDPVQTTKTSVIGAINMLGLAKRTKAKILQA 114
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERL 195
ST EVYG P+ P Q +Y+ G + R Y K+ E L
Sbjct: 115 STSEVYGD------PEIHP--QVESYW-----------GRVNPIGARSCYDEGKRCAETL 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++GL ++R FN GPRM P++G RV++ F LR + L L
Sbjct: 156 FFDYRRQHGLRIKVMRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGETLTLYGE 206
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R+F Y+ D I A++L+++ G I NVGNP +E+++R LAE +V +
Sbjct: 207 GEQTRSFCYVDDLIRAMILLMDTDDVVTGPI-NVGNP-DEISIRGLAE---QVLGLTGSD 261
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY-QHRT 374
LE DD +R PD+T+ + LGW P +L D L T+ Y + R
Sbjct: 262 GRLETRPSPA----------DDPRQRQPDITLAREALGWEPTVALEDGLARTIDYFRQRL 311
Query: 375 YAEAI 379
A+A
Sbjct: 312 SADAF 316
>gi|209967266|ref|YP_002300181.1| dTDP-D-glucose 4,6-dehydratase [Rhodospirillum centenum SW]
gi|209960732|gb|ACJ01369.1| dTDP-D-glucose 4,6-dehydratase, putative [Rhodospirillum centenum
SW]
Length = 320
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 162/363 (44%), Gaps = 57/363 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLC++++ + + ++ +D + D I HLL G R +
Sbjct: 8 VLVTGGAGFLGSHLCDRLIADG-NDVICVDNFFTGTKDNIAHLL------GHPRFEL--- 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ T ++ A+ ++ R+
Sbjct: 58 -LRHDVTFPLYVEV-DEIYNLACPASPVHYQNDPVQTTKTSVHGAINMLGLAKRLRARIF 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P P +D + + +P R Y K+ E L
Sbjct: 116 QASTSEVYGD------PDQHPQSED-----YRGNVNPI------GPRACYDEGKRCAETL 158
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++G++ + R FN GPRM P++G RV++ F LR P+ +
Sbjct: 159 FFDYHRQHGVDIRVARIFNTYGPRMH-------PNDG--RVVSNFIVQALRNAPITIQGD 209
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R+F Y+ D I+A++ +++ P G + N+GNP E T+R+LA+ + + S
Sbjct: 210 GRQTRSFCYVDDLIDAIVRLMQAPEGTTGPV-NLGNP-GEFTIRELADQVIGLTGSRSEL 267
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
P DD +R PD+T LGW P+ L + LE T+ Y
Sbjct: 268 VYRPLPV-------------DDPMQRCPDITRARTLLGWEPRVPLREGLERTIRYFATLL 314
Query: 376 AEA 378
AEA
Sbjct: 315 AEA 317
>gi|16264188|ref|NP_436980.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti 1021]
gi|384533662|ref|YP_005716326.1| UDP-glucuronate decarboxylase [Sinorhizobium meliloti BL225C]
gi|433611398|ref|YP_007194859.1| Nucleoside-diphosphate-sugar epimerase [Sinorhizobium meliloti GR4]
gi|15140313|emb|CAC48840.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium
meliloti 1021]
gi|262189116|gb|ACY30251.1| UDP-xylose synthase 1 [Sinorhizobium meliloti 1021]
gi|333815838|gb|AEG08505.1| UDP-glucuronate decarboxylase [Sinorhizobium meliloti BL225C]
gi|429556340|gb|AGA11260.1| Nucleoside-diphosphate-sugar epimerase [Sinorhizobium meliloti GR4]
Length = 348
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 167/363 (46%), Gaps = 49/363 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE +LL H+++ LD ++ ++ + P + R+ I H
Sbjct: 31 ILVTGGAGFLGSHLCE-LLLGAGHEVICLDNFSTGLRRNIAPLKRFDTFRV------IAH 83
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E + D NLA +P Y P+ T + I +L ++ + R+ ST
Sbjct: 84 DV-VEPIDLEVDEIYNLACPASPPHYQADPIQTTKTCVIGSLNLLDLAARRGARIFQAST 142
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
E+YG P P Q +Y+ + +P FG R Y K+ E L +
Sbjct: 143 SEIYGD------PHVHP--QVESYW---GNVNP--FGP----RSCYDEGKRCAETLFFDF 185
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+G+E IVR FN GPRM P +G RV++ F L+ + + + G
Sbjct: 186 HKSHGVEIKIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDITIYGDGSQT 236
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F +++D I+ + ++ +P G + N+GNP E T+ +LAE + + S
Sbjct: 237 RSFCFVEDLIDGFVRLMASPPSLTGPV-NLGNP-AEFTIGELAEEVIRLTGSRSKIVRRP 294
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 379
P DD +R PD+++ ++LGW PK +L + L T+ Y + ++
Sbjct: 295 LPV-------------DDPRQRRPDISLATEELGWRPKVNLAEGLAHTIRYFDDLLSRSM 341
Query: 380 KQA 382
+++
Sbjct: 342 RES 344
>gi|225862486|ref|YP_002747864.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
03BB102]
gi|225789265|gb|ACO29482.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
03BB102]
Length = 321
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 165/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + + Y K K+ E + IQ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKE-----IQVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGEQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTDSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + K + D L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLVQFQAKVTWEDGLKETIKW 314
>gi|344337746|ref|ZP_08768680.1| UDP-glucuronate decarboxylase [Thiocapsa marina 5811]
gi|343802699|gb|EGV20639.1| UDP-glucuronate decarboxylase [Thiocapsa marina 5811]
Length = 323
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 156/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE++L E H ++ LD + D I HLLE + L
Sbjct: 9 ILVTGGAGFLGSHLCERLLAEG-HDVICLDNFFTGTKDNIAHLLESP---------YFEL 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 59 -MRHDVTFPLYVEV-DEIYNLACPASPIHYQFDPVQTTKTSVHGAINMLGLAKRVKAKIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG D + P +Y +G + R Y K+ E
Sbjct: 117 QASTSEVYG---------DPNIHPQPEHY----------WGHVNPIGPRSCYDEGKRCAE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++G+ + R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 158 TLFFDYRRQHGMRIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALRNEPITIY 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE + ++++P G + N+GNP E T+ +LAE + E+ S
Sbjct: 209 GEGTQTRSFCYVDDLIEGFIRLMDSPDDLTGPV-NLGNP-GEFTMIELAETILELTGSRS 266
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ + LGW P +L D L T+ Y
Sbjct: 267 ALVHEALPQ-------------DDPKQRQPDIGLARASLGWEPTVALRDGLTPTIGY 310
>gi|340353756|ref|ZP_08676565.1| UDP-glucose 4-epimerase [Prevotella pallens ATCC 700821]
gi|339608768|gb|EGQ13653.1| UDP-glucose 4-epimerase [Prevotella pallens ATCC 700821]
Length = 320
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 171/359 (47%), Gaps = 46/359 (12%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQ 71
R IK I + G GFIGS+LC K+L+ + K+ +D + ++++ E + + + IQ
Sbjct: 3 RNIKFRHILVAGGAGFIGSNLC-KVLVNSGCKVTCIDNLSTGCLENIKELKDNSHFNFIQ 61
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
F +IK + L+ + DL IN+A + +P Y P+DT+ ++ + +++ + +
Sbjct: 62 F---DIKDEHDTAHLVPI-DLIINMACVASPKAYYKEPIDTLMTSVVGTRNLLELARKLD 117
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
++ ST E+YG DPA +L E S + S R Y K+
Sbjct: 118 VPMLQASTSEIYG---------------DPALDILPESYSGNV--SCTGPRACYDEGKRA 160
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + G++ IVR FN GP M + G R + F N L + +
Sbjct: 161 AECLCMDYFRKYGVKVKIVRIFNTYGPNM---------ACGDGRAIPEFINRALSGKNII 211
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F YI D I ++ M+ N G N+GNP+ E ++R LA+++ ++
Sbjct: 212 IYGKGSQTRSFQYIDDTITGLVAML-NSDEIIGRPINIGNPNEECSIRDLAQLIIDL--- 267
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ ++A++ V DD KR PD+T+ + L W+P+TSL D L T+ Y
Sbjct: 268 LKSKSAIQYSDALV----------DDPKKRKPDITLAEKLLDWHPQTSLVDGLVKTIEY 316
>gi|288817582|ref|YP_003431929.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
gi|384128345|ref|YP_005510958.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
gi|288786981|dbj|BAI68728.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
gi|308751182|gb|ADO44665.1| NAD-dependent epimerase/dehydratase [Hydrogenobacter thermophilus
TK-6]
Length = 320
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 153/355 (43%), Gaps = 55/355 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + GA GFIGSHLCE+ L E +++ +D + D I HL G + +F
Sbjct: 3 VLITGAAGFIGSHLCERFLKEG-FQVIGMDNFITGSPDNIAHLF------GHPKFKFIHY 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
N+ + LEG + DL ++ A +P DY + P+ T+ + + L + R +
Sbjct: 56 NVINYIYLEGPV---DLVLHFACPASPIDYLSHPIHTMKVDSLGTLNTLGLAKLKRARYV 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P P Q Y+ P R Y +K+ E +
Sbjct: 113 FASTSEVYGD------PTIHP--QPETYWGYVNPVGP---------RSVYDESKRFSEAM 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A E+ ++ I R FN GPRM G RV+ F L+ +PL +
Sbjct: 156 CMAYHREHSIDVRIARIFNTYGPRMRINDG---------RVIPNFITQALKGEPLTVYGD 206
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R+F YI D +E + + +G I N+GNP EV++ +A+++ E+ S
Sbjct: 207 GKQTRSFCYIDDLVEGIFRLSTEDG-LSGEIINLGNPQ-EVSIIDVAKLILELTGSSSKI 264
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ + L W PK SL D L+ T+ +
Sbjct: 265 VFRSLPA-------------DDPKRRCPDIKKAKELLSWEPKVSLKDGLKITINW 306
>gi|116787327|gb|ABK24464.1| unknown [Picea sitchensis]
Length = 439
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 166/364 (45%), Gaps = 64/364 (17%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP 61
+GA V L L + ++ + + G GF+GSHL ++++ I+ + + + +++L
Sbjct: 101 SGAKVPLGLKRKSLR---VVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVLH- 156
Query: 62 ESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
G R + I+HD +E L+ D +LA +P Y P+ TI +N + L
Sbjct: 157 --HFGNPRFEL----IRHDV-VEPLLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTL 209
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
++ R + ST EVYG P + P Q AY+ + +P
Sbjct: 210 NMLGLAKRVGARFLLTSTSEVYGD------PLEHP--QTEAYW---GNVNPI------GV 252
Query: 182 RWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
R Y K+ E L Y GA +E I R FN GPRM G RV++
Sbjct: 253 RSCYDEGKRTAETLTMDYHRGAN--VEVRIARIFNTYGPRMCLDDG---------RVVSN 301
Query: 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVT 297
F LR++PL + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T
Sbjct: 302 FVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFT 355
Query: 298 VRQLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNP 356
+ +LA+++ E T+D ++K EF DD KR PD+T LGW P
Sbjct: 356 MLELAQVVKE--------------TIDPNAKIEFRPNTEDDPHKRKPDITKAKDLLGWQP 401
Query: 357 KTSL 360
K SL
Sbjct: 402 KVSL 405
>gi|334319680|ref|YP_004556309.1| UDP-glucuronate decarboxylase [Sinorhizobium meliloti AK83]
gi|384539415|ref|YP_005723499.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium
meliloti SM11]
gi|407723841|ref|YP_006843502.1| UDP-glucuronic acid decarboxylase 1 [Sinorhizobium meliloti Rm41]
gi|334097419|gb|AEG55429.1| UDP-glucuronate decarboxylase [Sinorhizobium meliloti AK83]
gi|336038068|gb|AEH83998.1| putative dTDP-glucose 4,6-dehydratase protein [Sinorhizobium
meliloti SM11]
gi|407323901|emb|CCM72502.1| UDP-glucuronic acid decarboxylase 1 [Sinorhizobium meliloti Rm41]
Length = 348
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 165/362 (45%), Gaps = 49/362 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE +LL H+++ LD ++ ++ + P ++ R+ + H
Sbjct: 31 ILVTGGAGFLGSHLCE-LLLGAGHEVICLDNFSTGLRRNIAPLTRFDTFRV------VAH 83
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E + D NLA +P Y P+ T + I +L ++ + R+ ST
Sbjct: 84 DV-VEPIDLEVDEIYNLACPASPPHYQADPIQTTKTCVIGSLNLLDLAARRGARIFQAST 142
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
E+YG P P Q +Y+ + +P FG R Y K+ E L +
Sbjct: 143 SEIYGD------PHVHP--QVESYW---GNVNP--FGP----RSCYDEGKRCAETLFFDF 185
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+G+ IVR FN GPRM P +G RV++ F L+ + + + G
Sbjct: 186 HKSHGVAIKIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDITIYGDGSQT 236
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F ++ D I+ + ++ +P G + N+GNP E T+ +LAE + + S
Sbjct: 237 RSFCFVDDLIDGFIRLMASPPSLTGPV-NLGNP-AEFTIGELAEEVIRLTGSRSKIVRRP 294
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 379
P DD +R PD+++ ++LGW PK +L + L T+ Y + +I
Sbjct: 295 LPV-------------DDPRQRRPDISLATEELGWRPKVNLAEGLAHTIRYFDDLLSRSI 341
Query: 380 KQ 381
+Q
Sbjct: 342 RQ 343
>gi|60932273|gb|AAX37336.1| UDP-glucuronic acid decarboxylase 3 [Populus tomentosa]
Length = 343
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 154/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L G R + I+H
Sbjct: 32 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLR--KWIGQPRFEL----IRH 85
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 86 DV-TEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 144
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG D + P Y +G++ R Y K++ E L++
Sbjct: 145 SEVYG---------DPLVHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 185
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+EF I R FN GPRM+ G RV++ F LR +PL + G
Sbjct: 186 DYHRQHGIEFRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEPLTVQKPGT 236
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E
Sbjct: 237 QTRSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMTELAETVKE---------- 282
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V+++ E DD +R PD+T LGW PK L D L
Sbjct: 283 LINPGVEINMVE---NTPDDPRQRKPDITKAKALLGWEPKVKLRDGL 326
>gi|319788581|ref|YP_004148056.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas suwonensis
11-1]
gi|317467093|gb|ADV28825.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas suwonensis
11-1]
Length = 313
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 57/353 (16%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI-KHD 80
+ G GF+GSHLC++ L+E H +L +D Y K Q I R + +HD
Sbjct: 7 VTGGAGFLGSHLCDR-LIEAGHDVLCVDNYYTGSK-------QNVLQLIDNPRFELMRHD 58
Query: 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140
+++ D NLA +P Y P+ T ++ A+ ++ R++ ST
Sbjct: 59 VTFPLYVEV-DRIYNLACPASPVHYQADPVQTTKTSVHGAINMLGLAKRTGARILQASTS 117
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIERLIYA 198
EVYG DP + E +G + R Y K+ E L +
Sbjct: 118 EVYG---------------DPEIHPQVE----TYWGRVNPVGIRSCYDEGKRCAETLFFD 158
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
++ LE ++R FN GPRM P++G RV++ F LR +P+ + G
Sbjct: 159 YWRQHQLEIKVMRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEPITIYGDGTQ 209
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+F Y+ D +E ++ ++ +P G + N+GNP E T+ +LAE + ++ V G++ L
Sbjct: 210 TRSFCYVDDLVEGMIRLMNSPVELTGPV-NIGNP-GEYTMLELAEAVLKL---VGGKSKL 264
Query: 319 E-EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
EP DD +R PD+++ + LGW PK +L D L T+ Y
Sbjct: 265 VFEPLPS-----------DDPKQRQPDISVAKEHLGWEPKVALEDGLRETIAY 306
>gi|424873540|ref|ZP_18297202.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169241|gb|EJC69288.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 348
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 154/354 (43%), Gaps = 49/354 (13%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76
P + + G GF+GSHLCE LL H+++ LD ++ ++ + AD + R N
Sbjct: 29 PKRVLVTGGAGFLGSHLCET-LLAAGHQVICLDNFSTGMRRNI-------ADLKRVDRFN 80
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ + L D NLA +P Y P+ T + + +L +++ + R++
Sbjct: 81 VVAHDIVHPLDLEVDEIYNLACPASPPHYQADPIHTTKTCVLGSLNLLELAARTGARILQ 140
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG P P Q +Y+ P R Y K+ E L
Sbjct: 141 ASTSEVYGD------PNVHP--QVESYWGNVNSFGP---------RSCYDEGKRCAETLF 183
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+ +G+E I+R FN GPRM P +G RV++ F L Q + + G
Sbjct: 184 FDFHNTHGVEIKIIRIFNTYGPRMR-------PDDG--RVVSNFIVQALTGQDITIYGDG 234
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F ++ D I ++ M+ +P+ G + N+GNP E T+R+LAE + + S
Sbjct: 235 SQTRSFCFVDDLIGGMVRMMASPSSLTGPV-NLGNP-GEFTIRELAEQVIGLTGSRSQII 292
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+++ Q+L W PK L L T+ Y
Sbjct: 293 HRALPV-------------DDPRQRRPDISLAMQELDWRPKIDLSSGLRQTIDY 333
>gi|375094248|ref|ZP_09740513.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora marina
XMU15]
gi|374654981|gb|EHR49814.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora marina
XMU15]
Length = 324
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 152/356 (42%), Gaps = 54/356 (15%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GS LCE+ LL H++ +D + D I HL E R +F ++
Sbjct: 10 VTGGAGFLGSQLCER-LLGNGHQVTCVDSFATGTPDNIAHLRE------HPRFEFVEHDV 62
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ DL +LA+ +P DY P+DT+ + ++ + R +
Sbjct: 63 TRPVEGSAVATDVDLVFHLASAASPKDYQRLPIDTLRVGALGTEHALRLATNAGARFVLT 122
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EVYG P P R+ +Y+ P R Y AK+ E L
Sbjct: 123 STSEVYGD------PLQHPQRE--SYWGNVNPIGP---------RSVYDEAKRYAEALTM 165
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A E+G + I R FN GPRM G RV+ F L +PL + G+
Sbjct: 166 AYLREHGTDVAIARVFNTYGPRMRADDG---------RVIPAFITQALTGKPLTVAGTGE 216
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+ Y+ D + +L + + N+GNPH E++VR+LAE + +
Sbjct: 217 QTRSVCYVDDTVGGLLSLAYSSLHGP---VNIGNPH-ELSVRRLAEEIL----------S 262
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
L +V ++ E DD +R PD+T+ +LGW P+ L + L T+ + R
Sbjct: 263 LTGASVPITKVE---GAVDDPSRRCPDITLARAELGWLPRVGLREGLNRTIAWFAR 315
>gi|23500289|ref|NP_699729.1| NAD-dependent epimerase/dehydratase [Brucella suis 1330]
gi|148558163|ref|YP_001257508.1| NAD-dependent epimerase/dehydratase family protein [Brucella ovis
ATCC 25840]
gi|256015321|ref|YP_003105330.1| NAD-dependent epimerase/dehydratase family protein [Brucella
microti CCM 4915]
gi|260568167|ref|ZP_05838636.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 4 str. 40]
gi|260756690|ref|ZP_05869038.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 6 str.
870]
gi|260882507|ref|ZP_05894121.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 9 str.
C68]
gi|261215998|ref|ZP_05930279.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str.
Tulya]
gi|261313389|ref|ZP_05952586.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M163/99/10]
gi|261319373|ref|ZP_05958570.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94]
gi|261750256|ref|ZP_05993965.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513]
gi|261753528|ref|ZP_05997237.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686]
gi|261756698|ref|ZP_06000407.1| NAD-dependent epimerase/dehydratase [Brucella sp. F5/99]
gi|265986627|ref|ZP_06099184.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M292/94/1]
gi|265996275|ref|ZP_06108832.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1]
gi|294853660|ref|ZP_06794332.1| dTDP-glucose 4,6-dehydratase [Brucella sp. NVSL 07-0026]
gi|297249638|ref|ZP_06933339.1| dTDP-glucose 4,6-dehydratase [Brucella abortus bv. 5 str. B3196]
gi|340792274|ref|YP_004757738.1| NAD-dependent epimerase/dehydratase family protein [Brucella
pinnipedialis B2/94]
gi|376278510|ref|YP_005108543.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis
VBI22]
gi|384223072|ref|YP_005614237.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis
1330]
gi|23463899|gb|AAN33734.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis
1330]
gi|148369448|gb|ABQ62320.1| NAD-dependent epimerase/dehydratase family protein [Brucella ovis
ATCC 25840]
gi|255997981|gb|ACU49668.1| NAD-dependent epimerase/dehydratase family protein [Brucella
microti CCM 4915]
gi|260154832|gb|EEW89913.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 4 str. 40]
gi|260676798|gb|EEX63619.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 6 str.
870]
gi|260872035|gb|EEX79104.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 9 str.
C68]
gi|260917605|gb|EEX84466.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 3 str.
Tulya]
gi|261298596|gb|EEY02093.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis B2/94]
gi|261302415|gb|EEY05912.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M163/99/10]
gi|261736682|gb|EEY24678.1| NAD-dependent epimerase/dehydratase [Brucella sp. F5/99]
gi|261740009|gb|EEY27935.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 5 str. 513]
gi|261743281|gb|EEY31207.1| NAD-dependent epimerase/dehydratase [Brucella suis bv. 3 str. 686]
gi|262550572|gb|EEZ06733.1| NAD-dependent epimerase/dehydratase [Brucella ceti M490/95/1]
gi|264658824|gb|EEZ29085.1| NAD-dependent epimerase/dehydratase [Brucella pinnipedialis
M292/94/1]
gi|294819315|gb|EFG36315.1| dTDP-glucose 4,6-dehydratase [Brucella sp. NVSL 07-0026]
gi|297173507|gb|EFH32871.1| dTDP-glucose 4,6-dehydratase [Brucella abortus bv. 5 str. B3196]
gi|340560733|gb|AEK55970.1| NAD-dependent epimerase/dehydratase family protein [Brucella
pinnipedialis B2/94]
gi|343384520|gb|AEM20011.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis
1330]
gi|358259948|gb|AEU07681.1| NAD-dependent epimerase/dehydratase family protein [Brucella suis
VBI22]
Length = 337
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 161/359 (44%), Gaps = 65/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E H ++ +D ++ + I+HLL D F
Sbjct: 20 VLVAGGAGFLGSHLCERLLNEG-HSVICVDNFSTGRIENIRHLLN------FDGFSF--- 69
Query: 76 NIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD ++ DL + NLA +P Y P+ T+ +N I +L +++ +
Sbjct: 70 -IRHD-----IVNTLDLRVDEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYK 123
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R+ ST EVYG D + P Y ++ FG R Y K+
Sbjct: 124 ARIFQASTSEVYG---------DPHVHPQPENYWGNVNS----FGP----RSCYDEGKRS 166
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + + G++ IVR FN GPRM P +G RV++ F L+ + +
Sbjct: 167 AETLFHDFHQQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDIT 217
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F Y+ D IE ++ +P + N+GNP E TV LAE + +
Sbjct: 218 VYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPV-NIGNP-GEFTVGALAEQIIAM--- 272
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S +Y DD +R PD+T+ ++LGW P +L LE T+ Y
Sbjct: 273 ----------TGSRSRIVYYPLPVDDPRQRRPDITVAKRELGWEPTVALAQGLEPTIAY 321
>gi|87310749|ref|ZP_01092876.1| dTDP-glucose 4-6-dehydratase [Blastopirellula marina DSM 3645]
gi|87286506|gb|EAQ78413.1| dTDP-glucose 4-6-dehydratase [Blastopirellula marina DSM 3645]
Length = 335
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 156/352 (44%), Gaps = 51/352 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN-IK 78
I + G GF+GSHLCE+ L+E H ++ LD + + + FH I+
Sbjct: 17 ILVTGGAGFLGSHLCER-LVEAGHDVICLD-------NFFTSQKSNIVRLLDFHNFEFIR 68
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
HD + +++ D NLA P Y P+ T ++ + A+ V+ R++ S
Sbjct: 69 HDITMPVWLEV-DEIYNLACPAAPGHYQYNPIKTTKTSVMGAINVLGMAKRCRARVLQAS 127
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG D + P Y + + +P R Y K++ E L
Sbjct: 128 TSEVYG---------DPEIHPQPESY--RGNVNPI------GPRACYDEGKRVAETLFMD 170
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
N + IVR FN GPRM P +G RV++ F + +P+ L G
Sbjct: 171 YHRSNRVAIKIVRIFNTYGPRMH-------PYDG--RVVSNFIRQAINNEPITLYGDGSQ 221
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+F Y D +EA++ M+ G + N+GNPH E T+RQLAE++ + S +
Sbjct: 222 TRSFCYRDDLVEAMIRMMNCDGSFIGPV-NIGNPH-EFTIRQLAELVVKYTG--SKSKFV 277
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+P + DD +R PD+ + ++L W PK L L++T+ +
Sbjct: 278 HKPLPE-----------DDPLQRQPDIALAKEKLDWEPKVELEAGLKATIEW 318
>gi|158423195|ref|YP_001524487.1| NAD-dependent epimerase/dehydratase family protein [Azorhizobium
caulinodans ORS 571]
gi|158330084|dbj|BAF87569.1| NAD-dependent epimerase/dehydratase family protein [Azorhizobium
caulinodans ORS 571]
Length = 357
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 157/361 (43%), Gaps = 57/361 (15%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQF 72
P I + G GF+GSHLCE LL H++L +D + ++HLL G R +
Sbjct: 28 PKRIAVTGGAGFVGSHLCEA-LLGRGHEVLCIDNFYTGARVNVQHLL------GNPRFEL 80
Query: 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
R +I +E D NLA +P Y P+ T+ ++ I A+ +
Sbjct: 81 MRHDITFPLYIE-----VDEIYNLACPASPVHYQFDPVQTVKTSVIGAINALGLAKRLRV 135
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLI 192
++ ST EVYG P+ P Q Y+ P R Y K+
Sbjct: 136 PVLQASTSEVYGD------PEVHP--QPEGYWGNVNPIGP---------RSCYDEGKRCA 178
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L + ++ + +VR FN GPRM P++G RV++ F LR + + +
Sbjct: 179 ETLFFDYHRQHQIAIKVVRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEDITV 229
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F Y+ D + ++ M+E+P G I N+GNP E T+RQLAE + +
Sbjct: 230 FGDGSQTRSFCYVDDLVRGLIAMMESPKDVIGPI-NIGNP-AEFTIRQLAEQVIALTGSR 287
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
S +E+P DD +R PD++ LGW P L L++T+ Y
Sbjct: 288 S--RIIEKPLPQ-----------DDPKQRQPDISRARDTLGWGPTVQLEQGLKATIAYFD 334
Query: 373 R 373
R
Sbjct: 335 R 335
>gi|406876412|gb|EKD25982.1| hypothetical protein ACD_79C01418G0003, partial [uncultured
bacterium]
Length = 192
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+I+A G GL FT+ RPFNWIGP +D +D G R + NL+ P++LVD
Sbjct: 1 VIWAYGETEGLPFTLFRPFNWIGPNLD---SLDSARIGSSRAITQLILNLVEGTPIQLVD 57
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVY---- 309
GG +R F I+D IE + +I+NP N IFN+GNP NE ++++LA ++ + +
Sbjct: 58 GGAQKRCFTDIQDGIECLTRIIDNPNNICNKQIFNIGNPVNEASIKELALVLLKKFNEHP 117
Query: 310 --AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+K A +E + S E+YG+GY D R P + + L W P ++ + + ST
Sbjct: 118 LRSKFPPFAGFKE----IESFEYYGKGYQDVQHRKPSVKKAKKLLNWEPTVNMDNSIAST 173
Query: 368 LTYQHRTYAEAIK 380
L + + Y K
Sbjct: 174 LDFFLKDYVSKQK 186
>gi|424666969|ref|ZP_18103994.1| hypothetical protein A1OC_00527 [Stenotrophomonas maltophilia
Ab55555]
gi|401069638|gb|EJP78159.1| hypothetical protein A1OC_00527 [Stenotrophomonas maltophilia
Ab55555]
Length = 353
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 162/360 (45%), Gaps = 54/360 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GF+GSHLC++ L+ H +L +D + K + G R + R ++
Sbjct: 45 VLVTGGAGFLGSHLCDR-LIAGGHDVLCVDNFYTGSK--TNVDGLLGQPRFELMRHDVTF 101
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+E D NLA +P Y P+ T ++ A+ ++ R++ ST
Sbjct: 102 PLYVE-----VDRIFNLACPASPIHYQQDPVQTTKTSVHGAINMLGLAKRLRARILQAST 156
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG DP + E +G + R Y K+ E L +
Sbjct: 157 SEVYG---------------DPEIHPQVEG----YWGRVNPIGIRSCYDEGKRCAETLFF 197
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++ LE ++R FN GPRM P++G RV++ F L+ +P+ + G
Sbjct: 198 DYWRQHQLEIKVMRIFNTYGPRMH-------PNDG--RVVSNFIVQALKGEPITIYGDGS 248
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D IE +L ++++PA G I N+GNP +E T+ +LAE + + V G
Sbjct: 249 QTRSFCYVDDLIEGMLRLMDSPADLTGPI-NIGNP-SEYTMLELAETVLRL---VGG--- 300
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY-QHRTYA 376
S EF DD +R PD+++ LGW PK L D L+ T+ Y +HR A
Sbjct: 301 -------ASKIEFRPLPSDDPRQRQPDISLAKADLGWEPKIGLEDGLKETIAYFRHRLQA 353
>gi|86355729|ref|YP_467621.1| dTDP-glucose 4,6-dehydratase [Rhizobium etli CFN 42]
gi|86279831|gb|ABC88894.1| probable dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CFN
42]
Length = 340
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 153/347 (44%), Gaps = 49/347 (14%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83
G GF+GSHLCE++LL H ++ LD ++ + +E + RI I+HD R
Sbjct: 29 GGAGFLGSHLCERLLLRG-HSVICLDNFSTGRRANVEHLTSHPHFRI------IEHDVRQ 81
Query: 84 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143
I+ A L N A+ +P DY P+ T+ +N + A+ + + ++ ST EVY
Sbjct: 82 PFDIE-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDCARKTGAIVVQSSTSEVY 140
Query: 144 GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN 203
G P SP R+ S C + R Y K+ E L +
Sbjct: 141 GD------PTQSPQRE-----------SYCGNVNSIGPRACYDEGKRSAETLFFDYHRTY 183
Query: 204 GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFI 263
G++ + R FN GPRM G RV++ F LR L + GQ R+F
Sbjct: 184 GVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNTDLTIYGDGQQTRSFC 234
Query: 264 YIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323
Y+ D +E L + +G I N+GNP E TVR+LAE++ ++ S L P V
Sbjct: 235 YVDDLVEGFLRFSAAGSTCHGPI-NLGNP-GEFTVRRLAEIIRDLTNSRSRIVHL--PAV 290
Query: 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
DD +R PD++ +LGW P+ L L T+ Y
Sbjct: 291 -----------VDDPRQRRPDISRAMTELGWQPQIELEAGLARTVEY 326
>gi|421117458|ref|ZP_15577821.1| NAD-binding protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410011169|gb|EKO69297.1| NAD-binding protein [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
Length = 312
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCE++L E I +++ + K++ + + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNI---QKLLNDSKFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 HDITDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++ ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRDHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKENITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 DGDQTRSFCYVDDLVEGIVRMM-NTENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK SL + + T+ Y
Sbjct: 262 SKIVHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEY 306
>gi|423632415|ref|ZP_17608161.1| hypothetical protein IK5_05264 [Bacillus cereus VD154]
gi|401261293|gb|EJR67455.1| hypothetical protein IK5_05264 [Bacillus cereus VD154]
Length = 321
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKSKYHKELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF V++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNVLQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKELVQFQAKVTWENGLKETIKW 314
>gi|239834581|ref|ZP_04682909.1| UDP-glucuronic acid decarboxylase 1 [Ochrobactrum intermedium LMG
3301]
gi|239822644|gb|EEQ94213.1| UDP-glucuronic acid decarboxylase 1 [Ochrobactrum intermedium LMG
3301]
Length = 322
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 159/358 (44%), Gaps = 59/358 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE++L E + + ++++L + D F ++H
Sbjct: 6 ILVAGGAGFLGSHLCERLLNEGNFVVCVDNFSTGRLENL---RNLLRYDTFSF----VRH 58
Query: 80 DSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
D ++ DL + NLA +P Y P+ T+ ++ I +L +++ + R+
Sbjct: 59 D-----IVNPIDLPVDEIYNLACPASPPHYQADPVHTMKTSVIGSLNLLELAAHYQARIF 113
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q AY+ P R Y K+ E L
Sbjct: 114 QASTSEVYGD------PQTHP--QPEAYWGNVNSFGP---------RSCYDEGKRSAETL 156
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
Y + G++ IVR FN GPRM P +G RV++ F L+R+ + +
Sbjct: 157 FYDFHKQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKREDITIYGD 207
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D IE ++ + R N+GNP E TVR+LAE + + S
Sbjct: 208 GSQTRSFCYVDDLIEGFSRLMNSQVRKP---VNLGNP-GEFTVRELAEQIIALTGSSSRI 263
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
PT DD +R PD+ + ++LGW P+ +L + L+ T+ Y R
Sbjct: 264 VYRPLPT-------------DDPRQRRPDIMLAKRELGWEPQIALVEGLKQTIAYFER 308
>gi|260760121|ref|ZP_05872469.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str.
292]
gi|260670439|gb|EEX57379.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 4 str.
292]
Length = 337
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 163/361 (45%), Gaps = 69/361 (19%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E H ++ +D ++ + I+HLL D F
Sbjct: 20 VLVAGGAGFLGSHLCERLLNEG-HSVICVDNFSTGRIENIRHLLN------FDGFSF--- 69
Query: 76 NIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD ++ DL + NLA +P Y P+ T+ +N I +L +++ +
Sbjct: 70 -IRHD-----IVNTLDLRVDEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYK 123
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAK 189
R+ ST EVYG DP + E+ +G++ R Y K
Sbjct: 124 ARIFQASTSEVYG---------------DPHVHPRPEN----YWGNVNSFGPRSCYDEGK 164
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
+ E L + + G++ IVR FN GPRM P +G RV++ F L+ +
Sbjct: 165 RSAETLFHDFHQQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGED 215
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
+ + G R+F Y+ D IE + ++ +P + N+GNP E TV LAE + +
Sbjct: 216 ITVYGDGSQTRSFCYVDDLIEGLHRLMYSPHAIRVPV-NIGNP-GEFTVGALAEQIIAM- 272
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
T S +Y DD +R PD+T+ ++LGW P +L LE T+
Sbjct: 273 ------------TGSRSRIVYYPLPVDDPRQRRPDITVAKRELGWEPTVALAQGLEPTIA 320
Query: 370 Y 370
Y
Sbjct: 321 Y 321
>gi|423422674|ref|ZP_17399705.1| hypothetical protein IE5_00363 [Bacillus cereus BAG3X2-2]
gi|423434108|ref|ZP_17411089.1| hypothetical protein IE9_00289 [Bacillus cereus BAG4X12-1]
gi|423507176|ref|ZP_17483759.1| hypothetical protein IG1_04733 [Bacillus cereus HD73]
gi|449087236|ref|YP_007419677.1| hypothetical protein HD73_0576 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|401119178|gb|EJQ27004.1| hypothetical protein IE5_00363 [Bacillus cereus BAG3X2-2]
gi|401127377|gb|EJQ35103.1| hypothetical protein IE9_00289 [Bacillus cereus BAG4X12-1]
gi|402444694|gb|EJV76573.1| hypothetical protein IG1_04733 [Bacillus cereus HD73]
gi|449020993|gb|AGE76156.1| hypothetical protein HD73_0576 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 321
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E +I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKNKYHKEL-----MKKIRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEQSIKEVAEVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKKLVQFQAKVTWENGLKETIKW 314
>gi|269837187|ref|YP_003319415.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM
20745]
gi|269786450|gb|ACZ38593.1| NAD-dependent epimerase/dehydratase [Sphaerobacter thermophilus DSM
20745]
Length = 319
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 160/360 (44%), Gaps = 61/360 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC+ LL H ++A+D + + HL+E T
Sbjct: 3 ILVTGGAGFIGSHLCDA-LLAAGHDVIAVDNFITGRRANVAHLMEHPRFT---------- 51
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +E L AD +LA+ +P Y P++T N + L +++ + RL+
Sbjct: 52 LVEHDV-IEPLDIEADQIYHLASPASPEGYMRHPIETHLVNSVGTLNLLRLAQRSGARLL 110
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST E YG D + P Y +G++ R Y +K+ E
Sbjct: 111 FTSTSEAYG---------DPLVHPQPETY----------WGNVNPIGPRSCYDESKRFGE 151
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
+ L+ IVR FN GPR D P +G RV+ F LR +PL +
Sbjct: 152 SITMEFIRRYDLDARIVRIFNTYGPRND-------PQDG--RVVPNFIMRALRGEPLPIF 202
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+ Y+ D + ++L +E A G + N+GNP +E TV +LA+++ ++
Sbjct: 203 GDGSQTRSLCYVSDLVRGLILAMER-DEARGQVINLGNP-DERTVLELAQIILDL----- 255
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
+ P S EF + DD ++R PD+T LGW P S+ D L T+ Y R
Sbjct: 256 ----CDSP----SEVEFLEKRPDDPERRCPDITRARTLLGWEPTVSIDDGLRETIAYFRR 307
>gi|381168003|ref|ZP_09877207.1| putative sugar-nucleotide epimerase/dehydratase [Phaeospirillum
molischianum DSM 120]
gi|380682894|emb|CCG42021.1| putative sugar-nucleotide epimerase/dehydratase [Phaeospirillum
molischianum DSM 120]
Length = 316
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 157/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLL-EPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L + + A +++ D I HLL P +
Sbjct: 8 VLVTGGAGFLGSHLCERLLEDGCDVLCADNLFTGTKDNIAHLLANPYFEL---------- 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 58 -LRHDVTFPLYVEV-DEIYNLACPASPVHYQRDPVQTTKTSVHGAINMLGLAKRIGAKIF 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + E+ GS+ R Y K+ E
Sbjct: 116 QASTSEVYG---------------DPEVHPQTENYR----GSVNPIGPRACYDEGKRCAE 156
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++GL + R FN GPRM P +G RV++ F L +P+ L
Sbjct: 157 TLFFDYWRQHGLRIKVARIFNTYGPRMH-------PDDG--RVVSNFIVQALEGRPITLY 207
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F ++ D IE L ++ G I N+GNP E+TVR+LAEM+ + S
Sbjct: 208 GDGSQTRSFCFVDDLIEGFLRLMATGDDITGPI-NIGNP-REMTVRELAEMVVAMVGSKS 265
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
G F+ DD +R PD+T+ + LGW PK +L + L+ T+ Y
Sbjct: 266 GIV-------------FHPLPADDPLQRRPDITLAKETLGWTPKVTLEEGLDRTIAY 309
>gi|225628976|ref|ZP_03787010.1| UDP-glucuronic acid decarboxylase 1 [Brucella ceti str. Cudo]
gi|225616822|gb|EEH13870.1| UDP-glucuronic acid decarboxylase 1 [Brucella ceti str. Cudo]
Length = 343
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 161/359 (44%), Gaps = 65/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E H ++ +D ++ + I+HLL D F
Sbjct: 26 VLVAGGAGFLGSHLCERLLNEG-HSVICVDNFSTGRIENIRHLLN------FDGFSF--- 75
Query: 76 NIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD ++ DL + NLA +P Y P+ T+ +N I +L +++ +
Sbjct: 76 -IRHD-----IVNTLDLRVDEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYK 129
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R+ ST EVYG D + P Y ++ FG R Y K+
Sbjct: 130 ARIFQASTSEVYG---------DPHVHPQPENYWGNVNS----FGP----RSCYDEGKRS 172
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + + G++ IVR FN GPRM P +G RV++ F L+ + +
Sbjct: 173 AETLFHDFHQQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDIT 223
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F Y+ D IE ++ +P + N+GNP E TV LAE + +
Sbjct: 224 VYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPV-NIGNP-GEFTVGALAEQIIAM--- 278
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S +Y DD +R PD+T+ ++LGW P +L LE T+ Y
Sbjct: 279 ----------TGSRSRIVYYPLPVDDPRQRRPDITVAKRELGWEPTVALAQGLEPTIAY 327
>gi|444309007|ref|ZP_21144648.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium M86]
gi|443487776|gb|ELT50537.1| NAD-dependent epimerase/dehydratase [Ochrobactrum intermedium M86]
Length = 356
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 159/358 (44%), Gaps = 59/358 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE++L E + + ++++L + D F ++H
Sbjct: 40 ILVAGGAGFLGSHLCERLLNEGNFVVCVDNFSTGRLENL---RNLLRYDTFSF----VRH 92
Query: 80 DSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
D ++ DL + NLA +P Y P+ T+ ++ I +L +++ + R+
Sbjct: 93 D-----IVNPIDLPVDEIYNLACPASPPHYQADPVHTMKTSVIGSLNLLELAAHYQARIF 147
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q AY+ P R Y K+ E L
Sbjct: 148 QASTSEVYGD------PQTHP--QPEAYWGNVNSFGP---------RSCYDEGKRSAETL 190
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
Y + G++ IVR FN GPRM P +G RV++ F L+R+ + +
Sbjct: 191 FYDFHKQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKREDITIYGD 241
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D IE ++ + R N+GNP E TVR+LAE + + S
Sbjct: 242 GSQTRSFCYVDDLIEGFSRLMNSQVRKP---VNLGNP-GEFTVRELAEQIIALTGSSSRI 297
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
PT DD +R PD+ + ++LGW P+ +L + L+ T+ Y R
Sbjct: 298 VYRPLPT-------------DDPRQRRPDIMLAKRELGWEPQIALVEGLKQTIAYFER 342
>gi|406969090|gb|EKD93810.1| hypothetical protein ACD_28C00057G0003 [uncultured bacterium]
Length = 310
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 160/356 (44%), Gaps = 55/356 (15%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALD--VYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ G GFIGSHLCE+ LL+ H+++A+D V D+ +++ E A R H +
Sbjct: 6 ITGGAGFIGSHLCER-LLQQGHQVVAVDNLVTGDQ-RNVQLLEGYGAAFRFFNHDITQPF 63
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D L + D NLA +P DY PL+T++ + ++ + + H ST
Sbjct: 64 D-----LDEPFDGVCNLACPASPIDYQLLPLETLWVSAAGTKNMLDFALQKEAEFFHAST 118
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIERLIY 197
EVYG DP L+ + +G++ Q R Y K+ E LI
Sbjct: 119 SEVYG---------------DP----LEHPQTEQYWGNVNCQGPRSCYDEGKRFAESLIV 159
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G + GL+ IVR FN GPRM G RV+ F L P+ + G
Sbjct: 160 NTGKKYGLDTKIVRIFNTYGPRMRKNDG---------RVIPNFITQALEGAPITVYGDGY 210
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y++D I+ + M+E A+ N+GNP E ++R+LAE + E+ S
Sbjct: 211 QTRSFCYVQDMIDGFMAMLE--AKDFSGPVNLGNPE-EYSIRRLAEKIVELVGSSS---- 263
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P V + E DD R PD+T+ ++L + PK L + L T+ + R
Sbjct: 264 ---PVVYKNLPE------DDPKVRRPDITLAREKLNFMPKVGLEEGLRETIEWFKR 310
>gi|194288727|ref|YP_002004634.1| NAD-dependent epimerase/dehydratase; dtdp-glucose 4,6-dehydratase;
UDP-glucuronate decarboxylase 3 [Cupriavidus taiwanensis
LMG 19424]
gi|193222562|emb|CAQ68565.1| putative NAD-dependent epimerase/dehydratase; putative dTDP-glucose
4,6-dehydratase; Putative UDP-glucuronate decarboxylase
3 [Cupriavidus taiwanensis LMG 19424]
Length = 342
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 157/357 (43%), Gaps = 62/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE+ L+ +L +D + + I HLL R F L
Sbjct: 9 ILVTGGAGFLGSHLCER-LVRAGQDVLCVDNFYTGTKENIAHLL--------GRTNFELL 59
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ A+ ++ R++
Sbjct: 60 --RHDVTFPLYVEV-DEIYNLACPASPVHYQHDPVQTTKTSVNGAINMLGLAKRLRARIL 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG DP ++ +E +G + R Y K+ E
Sbjct: 117 QASTSEVYG---------------DPEHHPQQEG----YWGHVNPVGIRSCYDEGKRCAE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L ++GL+ I R FN GPRM P++G RV++ F L QPL +
Sbjct: 158 TLFMDYHRQHGLDVRIARIFNTYGPRMH-------PADG--RVVSNFITQALTGQPLTVY 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R F Y+ D ++A++ ++E PA +G N+GNP E T+ ++A+
Sbjct: 209 GNGAQTRAFCYVDDMVDALVRLMEAPA--SGTPVNLGNP-CETTMLEIAQ---------- 255
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A+ T S E DD +R PD+T+ Q LGW P T+L L T+ Y
Sbjct: 256 ---AVLRATGSPSRIEMRPLPADDPHQRCPDITLARQLLGWEPTTALEQGLRRTVDY 309
>gi|62317595|ref|YP_223448.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 1 str.
9-941]
gi|83269578|ref|YP_418869.1| NAD-dependent epimerase/dehydratase [Brucella melitensis biovar
Abortus 2308]
gi|260544833|ref|ZP_05820654.1| NAD-dependent epimerase/dehydratase [Brucella abortus NCTC 8038]
gi|260763359|ref|ZP_05875691.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str.
86/8/59]
gi|423168507|ref|ZP_17155209.1| hypothetical protein M17_02196 [Brucella abortus bv. 1 str. NI435a]
gi|423172059|ref|ZP_17158733.1| hypothetical protein M19_02591 [Brucella abortus bv. 1 str. NI474]
gi|423174210|ref|ZP_17160880.1| hypothetical protein M1A_01607 [Brucella abortus bv. 1 str. NI486]
gi|423176087|ref|ZP_17162753.1| hypothetical protein M1E_00349 [Brucella abortus bv. 1 str. NI488]
gi|423181488|ref|ZP_17168128.1| hypothetical protein M1G_02587 [Brucella abortus bv. 1 str. NI010]
gi|423184621|ref|ZP_17171257.1| hypothetical protein M1I_02589 [Brucella abortus bv. 1 str. NI016]
gi|423187773|ref|ZP_17174386.1| hypothetical protein M1K_02590 [Brucella abortus bv. 1 str. NI021]
gi|423190192|ref|ZP_17176801.1| hypothetical protein M1M_01873 [Brucella abortus bv. 1 str. NI259]
gi|62197788|gb|AAX76087.1| NAD-dependent epimerase/dehydratase family protein [Brucella
abortus bv. 1 str. 9-941]
gi|82939852|emb|CAJ12861.1| NAD-dependent epimerase/dehydratase [Brucella melitensis biovar
Abortus 2308]
gi|260098104|gb|EEW81978.1| NAD-dependent epimerase/dehydratase [Brucella abortus NCTC 8038]
gi|260673780|gb|EEX60601.1| NAD-dependent epimerase/dehydratase [Brucella abortus bv. 2 str.
86/8/59]
gi|374536481|gb|EHR08001.1| hypothetical protein M19_02591 [Brucella abortus bv. 1 str. NI474]
gi|374539000|gb|EHR10507.1| hypothetical protein M17_02196 [Brucella abortus bv. 1 str. NI435a]
gi|374540211|gb|EHR11713.1| hypothetical protein M1A_01607 [Brucella abortus bv. 1 str. NI486]
gi|374546078|gb|EHR17538.1| hypothetical protein M1G_02587 [Brucella abortus bv. 1 str. NI010]
gi|374546921|gb|EHR18380.1| hypothetical protein M1I_02589 [Brucella abortus bv. 1 str. NI016]
gi|374553953|gb|EHR25366.1| hypothetical protein M1K_02590 [Brucella abortus bv. 1 str. NI021]
gi|374554689|gb|EHR26099.1| hypothetical protein M1E_00349 [Brucella abortus bv. 1 str. NI488]
gi|374556232|gb|EHR27637.1| hypothetical protein M1M_01873 [Brucella abortus bv. 1 str. NI259]
Length = 337
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 161/359 (44%), Gaps = 65/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E H ++ +D ++ + I+HLL D F
Sbjct: 20 VLVAGGAGFLGSHLCERLLNEG-HSVICVDNFSTGRIENIRHLLN------FDGFSF--- 69
Query: 76 NIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD ++ DL + NLA +P Y P+ T+ +N I +L +++ +
Sbjct: 70 -IRHD-----IVNTLDLRVDEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYK 123
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R+ ST EVYG D + P Y ++ FG R Y K+
Sbjct: 124 ARIFQASTSEVYG---------DPHVHPRPENYWGNVNS----FGP----RSCYDEGKRS 166
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + + G++ IVR FN GPRM P +G RV++ F L+ + +
Sbjct: 167 AETLFHDFHQQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDIT 217
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F Y+ D IE ++ +P + N+GNP E TV LAE + +
Sbjct: 218 VYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPV-NIGNP-GEFTVGALAEQIIAM--- 272
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S +Y DD +R PD+T+ ++LGW P +L LE T+ Y
Sbjct: 273 ----------TGSRSRIVYYPLPVDDPRQRRPDITVAKRELGWEPTVALAQGLEPTIAY 321
>gi|241207013|ref|YP_002978109.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860903|gb|ACS58570.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 340
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 152/352 (43%), Gaps = 49/352 (13%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
T+ + G GGF+GSHLCE+ LL+ H + LD ++ + + + RI ++
Sbjct: 24 TVLVNGGGGFLGSHLCER-LLQRGHSVTCLDNFSTGRRANVAHLASNTRFRI------VE 76
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
HD R + A L N A+ +P DY P+ T+ +N + A+ + + ++ S
Sbjct: 77 HDVRQPFDVD-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDCARKTGAIVVQSS 135
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P SP Q +Y P R Y K+ E L +
Sbjct: 136 TSEVYGD------PTQSP--QHESYCGNVNPIGP---------RGCYDEGKRSAETLFFD 178
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G++ + R FN GPRM G RV++ F LR L + GQ
Sbjct: 179 YHRTYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNADLTIYGDGQQ 229
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+F Y+ D IE L + NG I N+GNP E++VR+LAE++ ++ S L
Sbjct: 230 TRSFCYVDDLIEGFLRFSAAGSACNGPI-NLGNP-TEMSVRRLAEIIRDLTNSRSRIVHL 287
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T DD +R PD++ LGW P+ L L T+ Y
Sbjct: 288 PAVT-------------DDPRQRRPDISRAMADLGWKPRIGLEAGLARTVEY 326
>gi|206967594|ref|ZP_03228550.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
AH1134]
gi|365163542|ref|ZP_09359650.1| hypothetical protein HMPREF1014_05113 [Bacillus sp. 7_6_55CFAA_CT2]
gi|206736514|gb|EDZ53661.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
AH1134]
gi|363615408|gb|EHL66872.1| hypothetical protein HMPREF1014_05113 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 321
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E +I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKNKYHEEL-----MKKIRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEQSIKEVAEVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKKLVQFQAKVTWENGLKETIKW 314
>gi|418459342|ref|ZP_13030461.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora azurea
SZMC 14600]
gi|359740424|gb|EHK89265.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora azurea
SZMC 14600]
Length = 322
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 154/367 (41%), Gaps = 46/367 (12%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDS 81
M+G GFIGSH+CE+ LL+ H++ +D + P S+ R H +
Sbjct: 1 MLGGAGFIGSHMCEQ-LLDDGHRVTCVDSLLTGSVDNVAPLSRHPEFRFVEHDVTRPLSQ 59
Query: 82 RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCE 141
+ + D ++LA+ +P DY PL+T+ + ++ + + R + ST E
Sbjct: 60 WPD--LPAPDSVLHLASPASPPDYLRLPLETLRVGAVGTANALELATRHGARFLLASTSE 117
Query: 142 VYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGA 201
VYG P + P R+ +Y+ P R Y AK+ E L A
Sbjct: 118 VYGD------PLEHPQRE--SYWGNVNPIGP---------RSVYDEAKRYAEALTLAYHR 160
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
E+G + + R FN GPRM G R++ F L PL + G R+
Sbjct: 161 EHGTDVAVARIFNTYGPRMRVDDG---------RMIPNFITQALTNAPLTVAGTGTQTRS 211
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEP 321
Y+ D + +L + + N+GNPH E+TVR LAE EV A +
Sbjct: 212 VCYVDDTVSGLLALWRSGLTGP---VNIGNPH-ELTVRHLAE---EVRAVTGSD------ 258
Query: 322 TVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQ 381
S+ F DD +R PD+T+ LGW P+T L D L T+ + R + +
Sbjct: 259 ----STVTFVPGAVDDPRRRCPDITLARTALGWEPETGLHDGLRRTIAWFARNVHSSDRG 314
Query: 382 AVAKPVA 388
P A
Sbjct: 315 IAVVPSA 321
>gi|52144803|ref|YP_082027.1| UDP-glucose 4-epimerase [Bacillus cereus E33L]
gi|51978272|gb|AAU19822.1| UDP-glucose 4-epimerase (NAD-dependent epimerase) [Bacillus cereus
E33L]
Length = 321
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 165/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVRRGYNVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGEQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTDSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + K + D L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLVQFQAKVTWEDGLKETIKW 314
>gi|186474029|ref|YP_001861371.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815]
gi|184196361|gb|ACC74325.1| NAD-dependent epimerase/dehydratase [Burkholderia phymatum STM815]
Length = 341
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 157/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE+ L+ H +L +D + D I HLL D F +
Sbjct: 9 ILVTGGAGFLGSHLCER-LVALGHDVLCVDNFYTGTKDNIAHLL--------DCANFEMM 59
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 60 --RHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVGAKIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG + P ++D Y+ P R Y K+ E L
Sbjct: 117 QASTSEVYGDA------RVHPQKED--YWGHVNPIGP---------RSCYDEGKRCAETL 159
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
++GLE I R FN GPRM P++G RV++ F L +PL +
Sbjct: 160 FMDYRRQHGLEIRIARIFNTYGPRMH-------PADG--RVVSNFVMQALSGEPLTVYGD 210
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F ++ D I+A + ++ A +G + N+GNPH EV++ +A+ + E+
Sbjct: 211 GSQTRSFCFVDDMIDAFIRLMNLDAYPDGPV-NLGNPH-EVSMLDIAQRIVEI------- 261
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S+ EF DD R PD+ Q L W P+TSL D L T+ Y
Sbjct: 262 ------TGSSSAIEFRPLPIDDPWHRQPDIARARQLLAWQPQTSLGDGLAETVRY 310
>gi|417770369|ref|ZP_12418279.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Pomona str. Pomona]
gi|418684215|ref|ZP_13245404.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|400324178|gb|EJO76478.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Pomona str. Kennewicki
LC82-25]
gi|409947923|gb|EKN97917.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Pomona str. Pomona]
gi|455666235|gb|EMF31683.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Pomona str. Fox 32256]
Length = 312
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 165/356 (46%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCE++L E I +++ + K++ + + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNI---QKLLNDSKFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++ +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 HDVTDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++ ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRDHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKENITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 DGDQTRSFCYVDDLVEGIVRMM-NTENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK SL + + T+ Y
Sbjct: 262 SKIVHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEY 306
>gi|30018694|ref|NP_830325.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 14579]
gi|296501270|ref|YP_003662970.1| UDP-glucose 4-epimerase [Bacillus thuringiensis BMB171]
gi|423415671|ref|ZP_17392791.1| hypothetical protein IE1_04975 [Bacillus cereus BAG3O-2]
gi|423428537|ref|ZP_17405541.1| hypothetical protein IE7_00353 [Bacillus cereus BAG4O-1]
gi|29894235|gb|AAP07526.1| UDP-glucose 4-epimerase [Bacillus cereus ATCC 14579]
gi|296322322|gb|ADH05250.1| UDP-glucose 4-epimerase [Bacillus thuringiensis BMB171]
gi|401095406|gb|EJQ03464.1| hypothetical protein IE1_04975 [Bacillus cereus BAG3O-2]
gi|401124757|gb|EJQ32519.1| hypothetical protein IE7_00353 [Bacillus cereus BAG4O-1]
Length = 321
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKNKYHKELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF V++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNVLQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKELVQFQAKVTWENGLKETIKW 314
>gi|340382885|ref|XP_003389948.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Amphimedon
queenslandica]
Length = 440
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 153/359 (42%), Gaps = 67/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH-----R 74
I + G GF+GSHL ++++L+ H++ D Y TG R H
Sbjct: 127 ILVTGGAGFVGSHLVDQLMLQG-HEVTVADNYF------------TGRRRNVQHWIGHPN 173
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+ H +E L+ D +LA+ +P Y P+ TI SN I + V+ R+
Sbjct: 174 FELLHHDVVEPLMIEVDQIYHLASPASPVKYMYNPVKTIKSNTIGTINVLGLAKRVKARV 233
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST E+YG P++ P Q Y+ P R Y +K++ E
Sbjct: 234 LFASTSEIYGD------PEEHP--QKETYWGHVNTIGP---------RACYDESKRVAET 276
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L+YA + ++ + R FN GPRM G RV++ F L PL +
Sbjct: 277 LMYAYSKRDHIDVRVARIFNTYGPRMHMYDG---------RVVSNFIVQTLNGHPLTVYA 327
Query: 255 GGQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNP--HNEVTVRQLAEMMTEVYAK 311
G R+F+Y+ D + ++ LM N + N+GNP H + QL + +T V K
Sbjct: 328 PGNQTRSFMYVSDLVSGLMKLMNSNYSLP----CNLGNPEEHTILEFAQLVQDITGVKGK 383
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
VS + + + DD KR PD+T+ QLGW PK SL D + T Y
Sbjct: 384 VSMKKSQQ----------------DDPHKRKPDITVAKTQLGWEPKVSLRDGILKTTAY 426
>gi|358253224|dbj|GAA52542.1| UDP-glucuronic acid decarboxylase 1 [Clonorchis sinensis]
Length = 324
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 159/362 (43%), Gaps = 58/362 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL ++ L++ H++LALD + +H +E G + I H
Sbjct: 14 ILVTGGAGFVGSHLVDR-LMQDGHEVLALDNFATGRRHNIE--HWLGHSNFEL----IHH 66
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E + D +LA+ +P Y P+ TI +N + L ++ N R + ST
Sbjct: 67 DVS-EPIHIQVDEIYHLASPASPPHYMLNPIRTIKANTLGTLNMLGLARRTNARFLFSST 125
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG DPA + E +G++ R Y +K+L E L Y
Sbjct: 126 SEVYG---------------DPAVHPQPE----SYWGNVNPIGPRACYDESKRLGETLTY 166
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A GL I R FN GPRM G RV++ F L +PL + G
Sbjct: 167 AYSNRLGLSVKIARIFNTYGPRMQLDDG---------RVVSNFILQSLTNKPLTVYGSGN 217
Query: 258 SQRTFIYIKDAIEA-VLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F Y+ D ++ V LM N + N+GNP E++V +LA+++ +
Sbjct: 218 QTRSFQYVSDLVDGLVRLMASNYSLP----VNLGNP-EELSVLELADIIRQF-------- 264
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376
T SS EF DD +R P++ + QLGW P + D L T+ Y R Y
Sbjct: 265 -----TGSNSSIEFSSIPVDDPQRRRPEIEVAKIQLGWEPVVKIRDGLHKTVEY-FREYV 318
Query: 377 EA 378
++
Sbjct: 319 DS 320
>gi|261323210|ref|ZP_05962407.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33]
gi|261299190|gb|EEY02687.1| NAD-dependent epimerase/dehydratase [Brucella neotomae 5K33]
Length = 337
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 161/359 (44%), Gaps = 65/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E H ++ +D ++ + I+HLL D F
Sbjct: 20 VLVAGGAGFLGSHLCERLLNEG-HSLICVDNFSTGRIENIRHLLN------FDGFSF--- 69
Query: 76 NIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD ++ DL + NLA +P Y P+ T+ +N I +L +++ +
Sbjct: 70 -IRHD-----IVNTLDLRVDEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYK 123
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R+ ST EVYG D + P Y ++ FG R Y K+
Sbjct: 124 ARIFQASTSEVYG---------DPHVHPQPENYWGNVNS----FGP----RSCYDEGKRS 166
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + + G++ IVR FN GPRM P +G RV++ F L+ + +
Sbjct: 167 AEMLFHDFHQQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDIT 217
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F Y+ D IE ++ +P + N+GNP E TV LAE + +
Sbjct: 218 VYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPV-NIGNP-GEFTVGALAEQIIAM--- 272
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S +Y DD +R PD+T+ ++LGW P +L LE T+ Y
Sbjct: 273 ----------TGSRSRIVYYPLPVDDPRQRRPDITVAKRELGWEPTVALAQGLEPTIAY 321
>gi|421124398|ref|ZP_15584655.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Grippotyphosa str.
2006006986]
gi|421135188|ref|ZP_15595313.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410020606|gb|EKO87406.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Grippotyphosa str.
Andaman]
gi|410437529|gb|EKP86628.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Grippotyphosa str.
2006006986]
Length = 312
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 164/356 (46%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCE++L E I +++ + K++ + + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNI---QKLLNDSKFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++ +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 YDVTDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + + ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKENITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 DGDQTRSFCYVDDLVEGIVRMM-NTENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK SL + + T+ Y
Sbjct: 262 SKIVHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEY 306
>gi|423653385|ref|ZP_17628684.1| hypothetical protein IKG_00373 [Bacillus cereus VD200]
gi|401301549|gb|EJS07137.1| hypothetical protein IKG_00373 [Bacillus cereus VD200]
Length = 321
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELIRRGYEVTVVDNFYKGKNKYHKELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF V++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNVLQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKELVQFQAKVTWENGLKETIKW 314
>gi|42779641|ref|NP_976888.1| NAD-dependent epimerase/dehydratase [Bacillus cereus ATCC 10987]
gi|42735557|gb|AAS39496.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
ATCC 10987]
Length = 321
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYDVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 RNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPF-----------------SEVGDRLYGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 GLE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTKSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|390560992|ref|ZP_10244259.1| putative sugar-nucleotide epimerase/dehydratase [Nitrolancetus
hollandicus Lb]
gi|390173433|emb|CCF83559.1| putative sugar-nucleotide epimerase/dehydratase [Nitrolancetus
hollandicus Lb]
Length = 319
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 161/368 (43%), Gaps = 54/368 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHLC+ L++ H ++A+D N + E R F I+H
Sbjct: 3 ILVAGGAGFIGSHLCDA-LVDAGHSVIAVD--NFVTGRAVNIEHLKSHPRFTF----IEH 55
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D + I+ AD +LA+ +P Y + P++T N I L +++ N R + ST
Sbjct: 56 DVTVPLEIQ-ADQIYHLASPASPVGYMSHPIETHLVNSIGTLNLLRLAEANQARFLFTST 114
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
E YG D + P Y FG++ R Y +K+ E +
Sbjct: 115 SEAYG---------DPLVHPQPETY----------FGNVNPVGPRSCYDESKRFGESITM 155
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
G++ IVR FN GPR D P +G RV+ F L + L + G+
Sbjct: 156 EFVRNFGVDARIVRLFNTYGPRND-------PEDG--RVVPNFVMRALAGEALPVYGDGE 206
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+ Y+ D IE +L +E+ A+G + N+GNP +E T+ +LA + E+ SG +
Sbjct: 207 QTRSLCYVSDLIEGLLRAMEH-DNASGEVINLGNP-DERTILELAHFIIEMAGSTSGIS- 263
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377
F DD D+R PD+T LGW P + + L T+ Y R Y
Sbjct: 264 ------------FEPARPDDPDRRCPDITKARDLLGWEPIVPIEEGLRETIAYFDR-YRS 310
Query: 378 AIKQAVAK 385
+A+A
Sbjct: 311 RTSRALAS 318
>gi|421748922|ref|ZP_16186450.1| NAD-dependent epimerase/dehydratase [Cupriavidus necator HPC(L)]
gi|409772302|gb|EKN54348.1| NAD-dependent epimerase/dehydratase [Cupriavidus necator HPC(L)]
Length = 365
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 162/373 (43%), Gaps = 63/373 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLL-EPESQTGADRIQFHR 74
+ + G GF+GSHLC++ L++ H +L +D + D I HLL EP +
Sbjct: 9 VLVTGGAGFLGSHLCDR-LVQAGHDVLCVDNFYTGSKDNIAHLLREPNFEL--------- 58
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD +++ D NLA +P Y + P+ T ++ A+ ++ R+
Sbjct: 59 --MRHDVTFPLYVEV-DQIYNLACPASPVHYQSDPVQTTKTSVHGAINMLGLAKRVKARI 115
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P P Q +Y+ P R Y K+ E
Sbjct: 116 LQASTSEVYGD------PDCHP--QQESYWGHVNPIGP---------RSCYDEGKRCAET 158
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L ++G++ I R FN GPRM P++G RV++ F L QPL +
Sbjct: 159 LFMDYHRQHGVDVRIARIFNTYGPRMH-------PADG--RVVSNFITQALSGQPLTVYG 209
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D IE ++ ++E P + I N+GNP E++ M E+ KV
Sbjct: 210 DGSQTRSFCYVDDLIEGLIRLMEAPGDHSTPI-NLGNP-CELS-------MLEIARKVLA 260
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
P V E DD +R PD+T QQL W P+ L + L T+ Y
Sbjct: 261 ATGSSAPIVMRPLPE------DDPRQRCPDITQAGQQLHWVPRIDLDEGLRRTVAY---- 310
Query: 375 YAEAIKQAVAKPV 387
+AE + + P
Sbjct: 311 FAERLARGAGMPA 323
>gi|374300652|ref|YP_005052291.1| UDP-glucuronate decarboxylase [Desulfovibrio africanus str. Walvis
Bay]
gi|332553588|gb|EGJ50632.1| UDP-glucuronate decarboxylase [Desulfovibrio africanus str. Walvis
Bay]
Length = 317
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 157/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE++L E H+++ +D + I HLL G +
Sbjct: 7 ILITGGSGFLGSHLCERLLSEG-HEVVCVDNFFCSSKSNIAHLL------GNPYFEL--- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD I++ D NLA +P Y T P+ T ++ A+ ++ ++
Sbjct: 57 -IRHDVTFPLYIEV-DEIYNLACPASPIHYQTDPVQTTKTSVHGAINMLGLAKRTRAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG PK P Q+ +Y+ + +P R Y K+ E L
Sbjct: 115 QASTSEVYGD------PKIHP--QEESYW---GNVNPIGL------RACYDEGKRCAETL 157
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ L + R FN GPRM P++G RV++ F L+ +PL +
Sbjct: 158 FFDYHRQHKLRIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALKGEPLTVYGD 208
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F ++ D IEA + + P G + N+GNP E T+ +LAE + + S
Sbjct: 209 GSQTRSFCFVSDLIEAFVRFMNTPDEVTGPV-NLGNP-GEFTILELAEQVIRMTGSKSKI 266
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
PT DD +R P++T + LGW PK L D L T+ Y
Sbjct: 267 DFRPLPT-------------DDPTQRKPNITKAREILGWEPKIPLHDGLARTIVY 308
>gi|237817146|ref|ZP_04596138.1| UDP-glucuronic acid decarboxylase 1 [Brucella abortus str. 2308 A]
gi|237787959|gb|EEP62175.1| UDP-glucuronic acid decarboxylase 1 [Brucella abortus str. 2308 A]
Length = 343
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 161/359 (44%), Gaps = 65/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E H ++ +D ++ + I+HLL D F
Sbjct: 26 VLVAGGAGFLGSHLCERLLNEG-HSVICVDNFSTGRIENIRHLLN------FDGFSF--- 75
Query: 76 NIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD ++ DL + NLA +P Y P+ T+ +N I +L +++ +
Sbjct: 76 -IRHD-----IVNTLDLRVDEIYNLACPASPPHYQADPVHTMKTNVIGSLNLLELAAHYK 129
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R+ ST EVYG D + P Y ++ FG R Y K+
Sbjct: 130 ARIFQASTSEVYG---------DPHVHPRPENYWGNVNS----FGP----RSCYDEGKRS 172
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + + G++ IVR FN GPRM P +G RV++ F L+ + +
Sbjct: 173 AETLFHDFHQQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDIT 223
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F Y+ D IE ++ +P + N+GNP E TV LAE + +
Sbjct: 224 VYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPV-NIGNP-GEFTVGALAEQIIAM--- 278
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S +Y DD +R PD+T+ ++LGW P +L LE T+ Y
Sbjct: 279 ----------TGSRSRIVYYPLPVDDPRQRRPDITVAKRELGWEPTVALAQGLEPTIAY 327
>gi|149174382|ref|ZP_01853009.1| NAD-dependent epimerase/dehydratase family protein [Planctomyces
maris DSM 8797]
gi|148846927|gb|EDL61263.1| NAD-dependent epimerase/dehydratase family protein [Planctomyces
maris DSM 8797]
Length = 314
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 162/358 (45%), Gaps = 62/358 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
++ + G GF+GSHLC++ L+E +++ LD + I HL+ G R + R
Sbjct: 3 SVLVTGGAGFLGSHLCDR-LIEQGREVICLDNFFSGSKRNIAHLI------GHPRFELIR 55
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I H LE NLA +P Y P+ TI ++ + + V+ ++
Sbjct: 56 HDIVHPFYLE-----VSEIYNLACPASPVAYQYNPIKTIKTSSVGMVNVLGLAKRCRAKV 110
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLI 192
+H ST EVYG DP + E+ +G++ R Y K++
Sbjct: 111 LHASTSEVYG---------------DPEVHPQVEE----YWGNVNPLGPRSCYDEGKRIA 151
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L + + IVR FN GPRMD P++G RV++ F N LR +PL +
Sbjct: 152 ESLCINYHQAHEVPIRIVRIFNTYGPRMD-------PNDG--RVISNFINQALRGEPLTI 202
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
GQ R+F Y+ D IE L M+ N G + N+GNP E T+ +LA+ V V
Sbjct: 203 YGDGQQTRSFCYVDDLIEGFLRMM-NQEETTGPV-NLGNP-VENTMLELAQA---VIKSV 256
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ E+ L T+ DD +R PD++ + L W P+ +L D L T+ Y
Sbjct: 257 NSESELVHETLPT----------DDPKQRCPDISKARKFLKWEPEVALKDGLAKTVEY 304
>gi|418699910|ref|ZP_13260859.1| NAD-binding protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|418705122|ref|ZP_13265987.1| NAD-binding protein [Leptospira interrogans serovar Hebdomadis str.
R499]
gi|410761031|gb|EKR27220.1| NAD-binding protein [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410764973|gb|EKR35675.1| NAD-binding protein [Leptospira interrogans serovar Hebdomadis str.
R499]
Length = 312
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 164/356 (46%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCE++L E I +++ + K++ + + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNI---QKLLNDSKFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 HDITDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + + ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKENITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 DGDQTRSFCYVDDLVEGIVRMM-NTENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK SL + + T+ Y
Sbjct: 262 SKIVHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEY 306
>gi|390957154|ref|YP_006420911.1| nucleoside-diphosphate-sugar epimerase [Terriglobus roseus DSM
18391]
gi|390412072|gb|AFL87576.1| nucleoside-diphosphate-sugar epimerase [Terriglobus roseus DSM
18391]
Length = 334
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 171/363 (47%), Gaps = 38/363 (10%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + GA GF+GSH+ + +L + H + D+ + +++L E + +FH +++
Sbjct: 4 VLITGAAGFLGSHVTDLMLKKGYHVVAVDDLSHGNLRNL---EDAFRSQEFEFHDVDVCD 60
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ L + D+ ++LAA P N P T+ NF ++ +E R + ST
Sbjct: 61 AASLRLAAQKVDMVLHLAAYKIPRYEN--PKKTLLVNFYGTQNALQVAAEQGARFVITST 118
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
+VYGK +P+ ++D S + G RW+YA +K E L+ A
Sbjct: 119 SDVYGK--------------NPSVPFAEDDDS--VLGPPTVARWAYAASKMFDEHLVLAI 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
E+G+ TI+R F GPR + + GP + F N ++ + + G
Sbjct: 163 AEESGISATILRIFGSYGPRQN-LTWWGGPQ-------SVFINTIVDGGEIPIHGDGLQT 214
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F +++D ++ E+ A A+G I N+GN H E+T+ LA+ + ++ GE
Sbjct: 215 RSFTFVEDTARGIVAAAESTA-ADGQIVNIGNSH-EITILDLAQRIH----RLCGEPG-- 266
Query: 320 EPTVDVSSKEFYGE-GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378
EP + + + + Y+D +R+PD + +G+ + S+ + L T+ +Q R +E
Sbjct: 267 EPRIRLIPYDAIADRKYEDVRRRVPDTRKAERLIGFRAQISIDEGLVKTIEWQKRRMSEQ 326
Query: 379 IKQ 381
+ +
Sbjct: 327 VSE 329
>gi|423473443|ref|ZP_17450185.1| hypothetical protein IEM_04747 [Bacillus cereus BAG6O-2]
gi|402425928|gb|EJV58070.1| hypothetical protein IEM_04747 [Bacillus cereus BAG6O-2]
Length = 321
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 159/352 (45%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E G I L+
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKNKY--HNELMKGISVIPISVLD--- 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
S + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KSSIYELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTKNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKGKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +R++AE + ++ VS
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKNIREVAEDIKKITKSVS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVHVPFEEVYPHGFEEIPNRKPDVTKLRELVQFQAKVTWEQGLKETMKW 314
>gi|424897675|ref|ZP_18321249.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393181902|gb|EJC81941.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 340
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 162/368 (44%), Gaps = 59/368 (16%)
Query: 9 DLDGRPI--KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPE 62
++ G P+ +P T + G GF+GSHLCE+ LL+ H+++ LD ++ + HL
Sbjct: 12 EVTGIPVLREPGTALVNGGAGFLGSHLCER-LLQRGHRVICLDNFSTGRRVNVDHL---- 66
Query: 63 SQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
A +FH ++HD R I+ A L N A+ +P DY P+ T+ +N + A+
Sbjct: 67 ----AANARFHL--VEHDVRQPFDIE-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVN 119
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+ + ++ ST EVYG P SP Q +Y P R
Sbjct: 120 TLDCARKTAAVVVQSSTSEVYGD------PNQSP--QPESYCGNVNPIGP---------R 162
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
Y K+ E L + G++ + R FN GPRM G RV++ F
Sbjct: 163 ACYDEGKRSAETLFFDYHRTYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIV 213
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLA 302
LR L + GQ R+F Y+ D +EA L +G I N+GNP E+TVR+LA
Sbjct: 214 QALRNADLTIYGDGQQTRSFCYVDDLVEAFLRFSAAGNACHGPI-NLGNPA-EITVRRLA 271
Query: 303 EMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD 362
E++ ++ S L P V DD +R PD++ LGW P L
Sbjct: 272 EIVRDLTNSRSRIVHL--PAV-----------IDDPRQRRPDISRAMADLGWQPCIGLEA 318
Query: 363 LLESTLTY 370
L T+ Y
Sbjct: 319 GLARTVEY 326
>gi|255575062|ref|XP_002528436.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
gi|223532112|gb|EEF33919.1| dtdp-glucose 4-6-dehydratase, putative [Ricinus communis]
Length = 346
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 157/347 (45%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ +D Y K L + G R + I+H
Sbjct: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNL--KKWIGHPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG DP + +E +G++ R Y K++ E L++
Sbjct: 148 SEVYG---------------DPLVHPQEE----SYWGNVNPIGVRSCYDEGKRVAETLMF 188
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAVRNEPLTVQAPGT 239
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E
Sbjct: 240 QTRSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMLELAETVKE---------- 285
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V+++ E DD +R PD+T + LGW PK L D L
Sbjct: 286 LINPDVEIAKVE---NTPDDPRQRKPDITKAKELLGWEPKIKLRDGL 329
>gi|295681240|ref|YP_003609814.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002]
gi|295441135|gb|ADG20303.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. CCGE1002]
Length = 331
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 166/374 (44%), Gaps = 60/374 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLE-PESQTGADRIQFHR 74
I + G GF+GSHLCE+++ + H +L +D + D I HLL+ P +
Sbjct: 9 ILVTGGAGFLGSHLCERLVTQG-HDVLCVDNFYTGTKDNIAHLLDCPNFEL--------- 58
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD +++ D NLA +P Y P+ T ++ A+ ++ R+
Sbjct: 59 --MRHDVTFPLYVEV-DEIYNLACPASPIHYQYDPVQTTKTSVHGAINMLGLAKRVKARI 115
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
ST EVYG + P +++ Y+ P R Y K+ E
Sbjct: 116 FQASTSEVYGDAL------VHPQKEN--YWGHVNPIGP---------RSCYDEGKRCAET 158
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L ++GL I R FN GPRM PS+G RV++ F LR +PL +
Sbjct: 159 LFMDYRRQHGLSIRIARIFNTYGPRMH-------PSDG--RVVSNFMMQALRGEPLTVYG 209
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D I+A +L++ + G + N+GNPH EV++R++A+ + V S
Sbjct: 210 DGTQTRSFCYVDDMIDAFILLMNSTDDPGGPV-NLGNPH-EVSMREIAQRIVAVTGSASP 267
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
A P DD R PD+++ + LGW P SL + L T Y R
Sbjct: 268 LEAQPLPA-------------DDPWHRQPDISLAIKLLGWRPGMSLDEGLLRTAHY-FRA 313
Query: 375 YAEAIKQAVAKPVA 388
EA +Q + V+
Sbjct: 314 RIEASQQTPPQQVS 327
>gi|30260666|ref|NP_843043.1| NAD-dependent epimerase/dehydratase [Bacillus anthracis str. Ames]
gi|47525777|ref|YP_017126.1| NAD-dependent epimerase/dehydratase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49183507|ref|YP_026759.1| NAD-dependent epimerase/dehydratase [Bacillus anthracis str.
Sterne]
gi|65317925|ref|ZP_00390884.1| COG0451: Nucleoside-diphosphate-sugar epimerases [Bacillus
anthracis str. A2012]
gi|165870675|ref|ZP_02215328.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0488]
gi|167634741|ref|ZP_02393060.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0442]
gi|167640823|ref|ZP_02399082.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0193]
gi|170688629|ref|ZP_02879835.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0465]
gi|170707194|ref|ZP_02897650.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0389]
gi|177655138|ref|ZP_02936768.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0174]
gi|190568169|ref|ZP_03021078.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|196040063|ref|ZP_03107365.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
NVH0597-99]
gi|218901646|ref|YP_002449480.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
AH820]
gi|227816621|ref|YP_002816630.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. CDC 684]
gi|229600428|ref|YP_002865110.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0248]
gi|254686895|ref|ZP_05150753.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. CNEVA-9066]
gi|254725975|ref|ZP_05187757.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A1055]
gi|254738878|ref|ZP_05196580.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. Western North America USA6153]
gi|254743738|ref|ZP_05201423.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. Kruger B]
gi|254756277|ref|ZP_05208306.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. Vollum]
gi|254762096|ref|ZP_05213945.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. Australia 94]
gi|301052161|ref|YP_003790372.1| UDP-glucose 4-epimerase [Bacillus cereus biovar anthracis str. CI]
gi|386734353|ref|YP_006207534.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. H9401]
gi|421509910|ref|ZP_15956811.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. UR-1]
gi|421639078|ref|ZP_16079672.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. BF1]
gi|423553637|ref|ZP_17529964.1| hypothetical protein IGW_04268 [Bacillus cereus ISP3191]
gi|30254034|gb|AAP24529.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. Ames]
gi|47500925|gb|AAT29601.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49177434|gb|AAT52810.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. Sterne]
gi|164713509|gb|EDR19033.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0488]
gi|167511217|gb|EDR86604.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0193]
gi|167529815|gb|EDR92563.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0442]
gi|170127972|gb|EDS96843.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0389]
gi|170667489|gb|EDT18246.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0465]
gi|172080287|gb|EDT65377.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0174]
gi|190560661|gb|EDV14637.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. Tsiankovskii-I]
gi|196028918|gb|EDX67523.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
NVH0597-99]
gi|218538782|gb|ACK91180.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
AH820]
gi|227006027|gb|ACP15770.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. CDC 684]
gi|229264836|gb|ACQ46473.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. A0248]
gi|300374330|gb|ADK03234.1| UDP-glucose 4-epimerase [Bacillus cereus biovar anthracis str. CI]
gi|384384205|gb|AFH81866.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. H9401]
gi|401183410|gb|EJQ90526.1| hypothetical protein IGW_04268 [Bacillus cereus ISP3191]
gi|401820084|gb|EJT19253.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. UR-1]
gi|403393993|gb|EJY91235.1| NAD-dependent epimerase/dehydratase family protein [Bacillus
anthracis str. BF1]
Length = 321
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 165/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGEQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTDSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + K + D L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLVQFQAKVTWEDGLKETIKW 314
>gi|317144146|ref|XP_003189569.1| UDP-glucuronic acid decarboxylase 1 [Aspergillus oryzae RIB40]
gi|391867374|gb|EIT76620.1| nucleoside-diphosphate-sugar epimerase [Aspergillus oryzae 3.042]
Length = 337
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 170/361 (47%), Gaps = 52/361 (14%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQ 71
K I + GA GF+GSHL + +LLE H+++ LD + + +KHL+ T
Sbjct: 10 KHSKILVAGAAGFLGSHLVD-LLLEKGHEVIGLDNFQTGFPNNLKHLISNAKFT------ 62
Query: 72 FHRLNIKHDSRLE-GLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
++HD R + + D +LA +P Y + T+ + + ++++ ++
Sbjct: 63 ----LVRHDVRAPLPELPIVDQIYHLACPASPIQYQKDHIGTLDTCYRGTKSLLEFATQR 118
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
R++ ST EVYG PK P Q Y+ + +P FG R Y K+
Sbjct: 119 KIRILFTSTSEVYGD------PKVCP--QPETYW---GNVNP--FGP----RSCYDEGKR 161
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
+ E L+Y ++G + I R FN GPRM S+G RV++ F + L QP+
Sbjct: 162 VGEALMYGYREQHGTDIRIARIFNTYGPRM-------AASDG--RVVSSFIASALSGQPI 212
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
++ G + R+F Y+ D L + N A G + N+GN NE T+ QLAEM+ E+ A
Sbjct: 213 QVTGDGSATRSFQYVSDCANG-LYRLMNSNYAKGPV-NIGN-DNENTILQLAEMVAELVA 269
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ ++P V + +F DD R PD ++ ++LGW P SL L T+ +
Sbjct: 270 STTS----QQPKVSI---KFLPSPVDDPTTRRPDNSLALRELGWKPIVSLEQGLRHTIRW 322
Query: 371 Q 371
Sbjct: 323 H 323
>gi|163846791|ref|YP_001634835.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus
J-10-fl]
gi|222524609|ref|YP_002569080.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl]
gi|163668080|gb|ABY34446.1| NAD-dependent epimerase/dehydratase [Chloroflexus aurantiacus
J-10-fl]
gi|222448488|gb|ACM52754.1| NAD-dependent epimerase/dehydratase [Chloroflexus sp. Y-400-fl]
Length = 316
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 153/356 (42%), Gaps = 58/356 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLC++ L E H ++A+D D I HL G R F
Sbjct: 3 VLITGGAGFLGSHLCDRFLAEG-HTVIAMDNLITGSTDNIAHL------AGHPRFLFIHH 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + +EG I D ++ A+ +P DY P+ T+ + + R +
Sbjct: 56 DVTNYIYIEGPI---DAVLHFASPASPIDYLELPIQTLKVGALGTHKALGLARAKGARFL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q +YY P R Y AK+ E +
Sbjct: 113 LASTSEVYGD------PQVHP--QPESYYGHVNPVGP---------RGVYDEAKRFAEAM 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +G+E IVR FN GPRM G RV+ F + LR +PL +
Sbjct: 156 TMAYHTYHGVETRIVRIFNTYGPRMRLRDG---------RVVPNFISQALRGEPLTIYGD 206
Query: 256 GQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E V L+ + N+GNP E T+ + A+++ E+ +G
Sbjct: 207 GSQTRSFQYVSDLVEGVYRLLFSDEVEP----VNIGNP-GEFTIAEFAQIVNEITGNKAG 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
D+ +K DD R PD+T + L W PK +L + LE T+ +
Sbjct: 262 VVYR-----DLRTK-------DDPQVRQPDITKARRILNWEPKVTLREGLEQTIPW 305
>gi|404404791|ref|ZP_10996375.1| nucleoside-diphosphate-sugar epimerase [Alistipes sp. JC136]
Length = 319
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 156/358 (43%), Gaps = 61/358 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLL-EPESQTGADRIQFHR 74
I + G GFIGSHLCE++L E + I+ LD Y I+HLL P +
Sbjct: 4 ILISGGAGFIGSHLCERLLAEG-NDIICLDNYFTGHKSNIRHLLPHPNFEV--------- 53
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD + ++ ++ NLA +P Y P+ T ++ I A+ ++ N ++
Sbjct: 54 --IRHDIIYPYMAEVEEI-YNLACPASPIYYQHDPIKTTQTSVIGAINMLGMAKYNRAKI 110
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P P R+D +V C Y K+ E
Sbjct: 111 LQASTSEVYGD------PLIHPQREDYWGHVNPLGIRSC-----------YDEGKRCAES 153
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + E+G+ I+R FN GP+MD G RV++ F LR + +
Sbjct: 154 LFMSYYREHGIPVKIIRIFNTYGPKMDINDG---------RVVSNFIVQALRGDNITIYG 204
Query: 255 GGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F YI D +E ++ M+ N P G + N+GNP NE T+ +LA + + S
Sbjct: 205 DGGQTRSFQYIDDMVEGMMRMMNNTPDNFTGPV-NIGNP-NEFTIAELAREVISLTGTRS 262
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL-GWNPKTSLWDLLESTLTY 370
L P DD +R PD+++ L GW PK L D L T+ Y
Sbjct: 263 KIVHLPLPA-------------DDPQQRQPDISLARNMLDGWEPKIQLRDGLRKTIAY 307
>gi|118581804|ref|YP_903054.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM
2379]
gi|118504514|gb|ABL00997.1| NAD-dependent epimerase/dehydratase [Pelobacter propionicus DSM
2379]
Length = 311
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 158/362 (43%), Gaps = 59/362 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLCE++L E H ++ LD + D I HL++ HR
Sbjct: 3 ILVTGGAGFIGSHLCERLLNEG-HDVICLDNFFTGSKDNIIHLMDN-----------HRF 50
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+ + ++ D NLA +P Y P+ T ++ + + ++ R++
Sbjct: 51 ELVRHDITQPILLEVDRIYNLACPASPIHYQYNPVKTTKTSVMGTINMLGLAKRVKARIL 110
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q Y+ + +P R Y K++ E L
Sbjct: 111 QASTSEVYGD------PQIHP--QTEEYW---GNVNPIGI------RSCYDEGKRVAETL 153
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ +N ++ I+R FN GPRM +E RV++ F LR Q + +
Sbjct: 154 MMDYYRQNNVDIRIIRIFNTYGPRM---------AENDGRVVSNFILQALRNQDITVYGD 204
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D +E ++ M+EN G + N+GNP E T+ +LAE + E
Sbjct: 205 GSQTRSFCYVSDLVEGMIRMMENDQGFIGPV-NLGNP-GEFTMLELAEKVIE-------- 254
Query: 316 AALEEPTVDVSSKEFYGE-GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
SSK + E DD +R PD+++ Q LGW P L + L + Y +
Sbjct: 255 ------QTGCSSKIIFAELPQDDPKQRQPDISLARQWLGWEPAVQLDEGLNMAIAYFRKN 308
Query: 375 YA 376
A
Sbjct: 309 AA 310
>gi|383755190|ref|YP_005434093.1| putative nucleotide sugar epimerase/dehydratase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
gi|381367242|dbj|BAL84070.1| putative nucleotide sugar epimerase/dehydratase [Selenomonas
ruminantium subsp. lactilytica TAM6421]
Length = 312
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 154/354 (43%), Gaps = 54/354 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLLEPESQTGADRIQFHRLN 76
+ + G GF+GSHLC++++ E I +++ D I+HLL G +F
Sbjct: 5 VLVTGGAGFLGSHLCDRLIKEGSDVICVDNLFTGNKDNIRHLL------GNPYFEF---- 54
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
I+HD + +++ D NLA +P Y P+ T ++ + AL ++ R++
Sbjct: 55 IRHDVTMPLYVEV-DQIYNLACPASPVHYQHDPIQTGRTSVLGALNMLGLARRLKARILQ 113
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG DP + E C+ + R Y K++ E L
Sbjct: 114 ASTSEVYG---------------DPEVHPQPERYRGCV--NPIGIRSCYDEGKRMAETLF 156
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+ + L +VR FN GPRM G RV++ F LR + + + G
Sbjct: 157 FDYKRQENLNIKVVRIFNTYGPRMSLNDG---------RVISNFVVQALRGEDITIYGDG 207
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F Y+ D IE + M+ N N+GNP E T++QLAE++ ++ S
Sbjct: 208 SQTRSFQYVDDLIEGMYRMMNNSREDFSGPVNIGNPA-EYTIKQLAEIVLKMTGSSSKIV 266
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P+ DD +R P + + +LGW PK +L + L+ T+ Y
Sbjct: 267 YKSLPS-------------DDPVQRCPVIDVAMSELGWKPKVALEEGLKRTIEY 307
>gi|145361853|ref|NP_850694.2| UDP-glucuronic acid decarboxylase 1 [Arabidopsis thaliana]
gi|17473549|gb|AAL38251.1| dTDP-glucose 4-6-dehydratase-like protein [Arabidopsis thaliana]
gi|28058970|gb|AAO29973.1| dTDP-glucose 4-6-dehydratase-like protein [Arabidopsis thaliana]
gi|332645579|gb|AEE79100.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis thaliana]
Length = 435
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/355 (28%), Positives = 162/355 (45%), Gaps = 63/355 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL +K++ I+ + + + ++L+ S R +
Sbjct: 118 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNP---RFEL--- 171
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 172 -IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFL 229
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DP + KE +G++ +R Y K+ E
Sbjct: 230 LTSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGERSCYDEGKRTAE 270
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F +R+ P+
Sbjct: 271 TLAMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQTIRKHPMT 319
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D +E ++ ++E N H+ FN+GNP E T+ +LAE++ EV
Sbjct: 320 VYGDGKQTRSFQYVSDLVEGLVALME-----NDHVGPFNLGNP-GEFTMLELAEVVKEVI 373
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+P+ + EF DD KR PD++ +QL W PK SL + L
Sbjct: 374 ----------DPSATI---EFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGL 415
>gi|196034702|ref|ZP_03102110.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
W]
gi|195992745|gb|EDX56705.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
W]
Length = 321
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 165/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGEQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGKIINIGS-ENEKSIKEVAEVIKKLTDSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + K + D L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLVQFQAKVTWEDGLKETIKW 314
>gi|357417441|ref|YP_004930461.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas spadix
BD-a59]
gi|355335019|gb|AER56420.1| NAD-dependent epimerase/dehydratase [Pseudoxanthomonas spadix
BD-a59]
Length = 323
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 165/370 (44%), Gaps = 57/370 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE++L E ++++ LD + I+HLL D F
Sbjct: 7 ILITGGAGFLGSHLCERLLGEG-NEVICLDNFFTGSRGNIRHLL--------DDPWFDL- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD E + AD NLA +P Y P+ T ++ A+ V+ R++
Sbjct: 57 -VRHDV-TEPMKIEADQIYNLACPASPVHYQRDPVQTTKTSVHGAINVLDLARRLGVRVL 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q +Y+ P R Y K+ E L
Sbjct: 115 QASTSEVYGD------PEVHP--QTESYWGRVNPVGP---------RSCYDEGKRCAETL 157
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ + L + R FN GPRM P +G RV++ F L QP+ +
Sbjct: 158 FFDFNRQYALPIKVARIFNTYGPRMQ-------PDDG--RVVSNFIVQALTGQPITIFGD 208
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D I+ ++ ++ +P G + N+GNP +E ++ +LA+ +V A +
Sbjct: 209 GSQTRSFCYVDDLIDGLVRLMASPEEVTGPV-NIGNP-SEFSMLELAD---QVIALTGSK 263
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
+A++ F DD +R PD+ + QLGW P+ L LE T+ Y +
Sbjct: 264 SAIQ----------FRPLPQDDPRQRQPDIAVARAQLGWVPQVPLATGLERTIDYFRQLL 313
Query: 376 AEAIKQAVAK 385
A+A + +
Sbjct: 314 ADATHDGLPR 323
>gi|423590263|ref|ZP_17566327.1| hypothetical protein IIE_05652 [Bacillus cereus VD045]
gi|401221085|gb|EJR27711.1| hypothetical protein IIE_05652 [Bacillus cereus VD045]
Length = 321
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKNKYHKELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKELVQFQAKVTWENGLKETIKW 314
>gi|383318635|ref|YP_005379476.1| dTDP-glucose 4,6-dehydratase [Methanocella conradii HZ254]
gi|379320005|gb|AFC98957.1| dTDP-glucose 4,6-dehydratase [Methanocella conradii HZ254]
Length = 318
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 156/357 (43%), Gaps = 58/357 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHR 74
T + G GFIGSHLCE LL +++A+D D +K +L+ D F
Sbjct: 3 TSVVTGGAGFIGSHLCE-YLLSKGERVIAVDNLGSGNMDNVKGMLD------DDNFSF-- 53
Query: 75 LNIKHDSRLEGLI-KMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
I+HD R I + D +LA+ +P+D+ P++ + +N + V+ EN R
Sbjct: 54 --IEHDVREPLKIGERVDFFYHLASRASPSDFGRYPIEIMMTNSVGTYNVINVALENKAR 111
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
+ ST E YG P SP Q Y+ P R Y +K+ E
Sbjct: 112 FLLASTSESYGD------PDVSP--QPETYWGHVNPVGP---------RSCYDESKRFAE 154
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L A GL+ ++R FN GPRM P +G RV+ F L +PL +
Sbjct: 155 ALTMAFIRRQGLDGRVIRIFNTYGPRMR-------PDDG--RVVPNFITQALSGKPLTVY 205
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D + + LM+ + A G + N+GNP +E+TV +LA + ++ S
Sbjct: 206 GDGSQTRSFCYVSDLVRGIYLMMH--SNAKGMVVNLGNP-DEMTVLELARKIKDMTGSPS 262
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P +D +R PD+ LGW P+ SL D L+ T+ +
Sbjct: 263 EIVFKPLPE-------------NDPLQRRPDIARAKALLGWEPEVSLEDGLKRTIAW 306
>gi|406575489|ref|ZP_11051193.1| NAD-dependent epimerase/dehydratase [Janibacter hoylei PVAS-1]
gi|404555201|gb|EKA60699.1| NAD-dependent epimerase/dehydratase [Janibacter hoylei PVAS-1]
Length = 331
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 167/369 (45%), Gaps = 62/369 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD--VYND--KIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ L+ +++ALD V D + HL + + G + H++
Sbjct: 3 VVVTGGAGFLGSHLCER-LIRRGDQVVALDNFVTGDAANVAHL---QHEPG---FELHQV 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ D ++G + DL ++ A+ +P DY P++T+ I + + R +
Sbjct: 56 DVTRDVSVDGDV---DLVLHFASPASPVDYLKLPIETLEVGSIGTMHALALARAKGARFV 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + E +G + R Y AK+ E
Sbjct: 113 LASTSEVYG---------------DPAVHPQPE----TYWGHVNPVGPRGVYDEAKRFAE 153
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
+ A +G+ IVR FN GPRM P++G R + F L +P+ +
Sbjct: 154 AMTLAHRNTHGISTGIVRIFNTFGPRMR-------PNDG--RAIPNFVRQALAGEPVTVA 204
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+ Y+ D + +L + ++ + N+GNPH E++++ LAE + +++
Sbjct: 205 GDGSQTRSICYVDDLVTGILALADS---DHAGPVNIGNPH-EISMKDLAEWII----RLT 256
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT-YQH 372
G + S+ E+ DD R PD + + LGWNP+ + D L T+ ++
Sbjct: 257 GSS---------STIEYIPRPVDDPTVRRPDTALAEELLGWNPEVPIEDALLRTIDWFRD 307
Query: 373 RTYAEAIKQ 381
T AE +
Sbjct: 308 ETRAEHFAE 316
>gi|402553957|ref|YP_006595228.1| NAD-dependent epimerase/dehydratase [Bacillus cereus FRI-35]
gi|401795167|gb|AFQ09026.1| NAD-dependent epimerase/dehydratase [Bacillus cereus FRI-35]
Length = 321
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 163/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYDVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPF-----------------SEVGDRLYGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
G E GL TIVR FN GPR DGP GV PR F LR + + + G+
Sbjct: 163 GLE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALRGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++A ++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAAVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|427785685|gb|JAA58294.1| Putative dtdp-glucose 4-6-dehydratase/udp-glucuronic acid
decarboxylase [Rhipicephalus pulchellus]
Length = 451
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 152/354 (42%), Gaps = 57/354 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL + L++ H++ +D + KH +E I + H
Sbjct: 130 ILVAGGAGFVGSHLVD-YLMQQGHQVTVVDNFFTGSKHNIE-------HWIGHQNFELIH 181
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ L D NLA+ +P Y P+ TI +N + + ++ RL+ ST
Sbjct: 182 HDIVSPLFIEVDYIYNLASPASPPHYMMNPVKTIKTNTLGTINMLGLARRVGARLLITST 241
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG DPA + ED +G + R Y K++ E L Y
Sbjct: 242 SEVYG---------------DPAVHPQNED----YWGHVNPVGPRSCYDEGKRVAESLCY 282
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A + ++ + R FN GPRM G RV++ F L+ +PL + G+
Sbjct: 283 AYAKQENVDVRVARVFNTFGPRMHLNDG---------RVVSNFILQALQDKPLTIHGSGK 333
Query: 258 SQRTFIYIKDAIEA-VLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F Y+ D I+ V LM N +R N+GNP E T+ + A+++ + V G +
Sbjct: 334 QTRSFQYVSDLIDGLVALMHANYSRP----VNLGNP-EEHTIEEFAQIVKNL---VGGSS 385
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+E + DD +R PD+T + L W PK L D L T+ Y
Sbjct: 386 KIE----------YVSTVIDDPQRRRPDITRAKKYLSWEPKVPLLDGLRKTVAY 429
>gi|423455940|ref|ZP_17432793.1| hypothetical protein IEE_04684 [Bacillus cereus BAG5X1-1]
gi|401133364|gb|EJQ40995.1| hypothetical protein IEE_04684 [Bacillus cereus BAG5X1-1]
Length = 321
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 160/352 (45%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKNKYHNELMKE-----ISVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
S + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KSSIYELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTKNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKGKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +R++AE + ++ VS
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKNIREVAEDIKKITKSVS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVHVPFEEVYPHGFEEIPNRKPDVTKLRELVQFQAKVTWEQGLKETMKW 314
>gi|218232522|ref|YP_002365288.1| NAD-dependent epimerase/dehydratase [Bacillus cereus B4264]
gi|218160479|gb|ACK60471.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
B4264]
Length = 321
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKNKYHKELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEQSIKEVAEVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKELVQFQAKVTWENGLKETIKW 314
>gi|374586933|ref|ZP_09660025.1| NAD-dependent epimerase/dehydratase [Leptonema illini DSM 21528]
gi|373875794|gb|EHQ07788.1| NAD-dependent epimerase/dehydratase [Leptonema illini DSM 21528]
Length = 310
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 160/357 (44%), Gaps = 62/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLCE LL H ++ LD + + HLL DR + R
Sbjct: 5 ILITGGAGFIGSHLCET-LLSRGHHVICLDNFFTGHRQNVAHLLS------NDRFEIIRH 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+I +E AD+ N+A +P Y P+ T+ ++ + A+ +++ R++
Sbjct: 58 DITSPLSIE-----ADMIYNMACPASPVHYQFDPIKTMKTSVLGAMHLLEEARRTKARIL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q +Y + + +P R Y K+ E L
Sbjct: 113 QASTSEVYGD------PEIHP--QTESY---RGNVNPIGI------RACYDEGKRAAETL 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ + G E +VR FN GPRMD P++G RV++ F L+ + L +
Sbjct: 156 FFDYERQYGTEIRVVRIFNTYGPRMD-------PNDG--RVVSNFIVQALKGEELTIYGD 206
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D + ++ ++E +G N+GN E TV++LAEM+ E+ S
Sbjct: 207 GSQTRSFCYVDDLVRGIIGLME----VDGFTGPMNLGN-DGEFTVKELAEMVLELTGSKS 261
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L P DD KR PD+ + +++G+ P L + L T+ Y
Sbjct: 262 KITYLPLPQ-------------DDPIKRRPDLGLAREKIGYAPTVPLREGLVRTIEY 305
>gi|108757676|ref|YP_631700.1| NAD-dependent epimerase/dehydratase [Myxococcus xanthus DK 1622]
gi|108461556|gb|ABF86741.1| NAD-dependent epimerase/dehydratase family protein [Myxococcus
xanthus DK 1622]
Length = 319
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 54/354 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GF+GSHLCE++L + ++A+D + L + G F + +I
Sbjct: 6 VAVLGGAGFVGSHLCERLLDDGAAAVIAVDNLITGNEENL--RTLNGRPGFSFVKADITE 63
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+EG + D N+A+ +P DY PL+T+ I +K N + ST
Sbjct: 64 RIPVEGPL---DYVFNMASPASPIDYAQLPLETLRVGSIGTENGLKLAEANKAVFLMAST 120
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG DP + +ED +G++ R Y AK+ E +
Sbjct: 121 SEVYG---------------DPLVHPQRED----YWGNVNPIGPRSVYDEAKRYSEAITA 161
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G G++ IVR FN GPRM G RV+ F L+ + + G
Sbjct: 162 AYGRTKGVQVRIVRIFNTYGPRMRLNDG---------RVVPAFVGQALKGEDFTVFGDGS 212
Query: 258 SQRTFIYIKDAIEA-VLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F Y+KD ++ V LM+ + + + N+GNP E+T+RQ AE + +
Sbjct: 213 QTRSFCYVKDLVDGLVRLMLSDES----NPVNIGNPR-EMTIRQFAEAVRAAAGGGG--S 265
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+E+P DD +R PD+T LGW PK L + L T+ +
Sbjct: 266 IIEKPLPK-----------DDPKQRQPDITRARTLLGWEPKVPLEEGLRETIAW 308
>gi|85858490|ref|YP_460692.1| UDP-D-glucuronate carboxy-lyase [Syntrophus aciditrophicus SB]
gi|85721581|gb|ABC76524.1| UDP-D-glucuronate carboxy-lyase [Syntrophus aciditrophicus SB]
Length = 310
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 162/358 (45%), Gaps = 63/358 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE+ LL H IL LD + D I H++ G R +
Sbjct: 3 ILITGGAGFLGSHLCER-LLADKHDILCLDNFFTGSKDNILHMV------GNPRFEL--- 52
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD + +++ D NLA +P Y P+ TI ++ + A+ + R++
Sbjct: 53 -IRHDMTMPIYLEV-DQIYNLACPASPVHYQYNPIKTIKTSVMGAINTLGLAKRVKARIL 110
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG P+ P Q+ AY+ G + R Y K+ E
Sbjct: 111 QASTSEVYGD------PEVHP--QNEAYW-----------GRVNPIGIRSCYDEGKRAAE 151
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L+ +NG++ IVR FN G RM G RV++ F L + + +
Sbjct: 152 CLMMDYRRQNGVDTKIVRIFNTYGSRMAMSDG---------RVVSNFIVQALTGKDITVY 202
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F ++ D IE ++ ++ P +G I N+GNP E T+ +LAE + +
Sbjct: 203 GDGSQTRSFCFVDDMIEGLIRIMNTPKEISGPI-NLGNPA-EFTILELAEKVIAL----- 255
Query: 314 GEAALEEPTVDVSSKEFYGE-GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
D SS+ + DD +R PD+ + + L WNPKTSL + L+ T+ Y
Sbjct: 256 ---------TDSSSRILFQPLPQDDPAQRQPDIALAAEILNWNPKTSLEEGLKRTIAY 304
>gi|423556577|ref|ZP_17532880.1| hypothetical protein II3_01782 [Bacillus cereus MC67]
gi|401194851|gb|EJR01819.1| hypothetical protein II3_01782 [Bacillus cereus MC67]
Length = 321
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 162/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E ++ + + Y K K+ E + I +++
Sbjct: 5 CLITGGAGFIGSHLAEGLVKRGYEVTIVDNFYKGKNKYHNELMKE-----ISVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
S + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KSSIYELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA +L ++ + NG I N+G+ NE +R++AE + ++ VS
Sbjct: 213 TRCFTYVSDAVEATILAMDE--KVNGEIINIGS-ENEKNIREVAEDIKKLTKSVS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIMHVPFEEVYPHGFEEIPNRKPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|456967055|gb|EMG08505.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Grippotyphosa str.
LT2186]
Length = 312
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 164/356 (46%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCE++L E I +++ + K++ + + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNI---QKLLNDSKFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++ +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 HDVTDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + + ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRSHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKENITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 DGDQTRSFCYVDDLVEGIVRMM-NTENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK SL + + T+ Y
Sbjct: 262 SKIVHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEY 306
>gi|357635109|ref|ZP_09132987.1| UDP-glucuronate decarboxylase [Desulfovibrio sp. FW1012B]
gi|357583663|gb|EHJ48996.1| UDP-glucuronate decarboxylase [Desulfovibrio sp. FW1012B]
Length = 316
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 157/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ LLE ++ LD Y + HLL D F L
Sbjct: 7 VLVTGGAGFLGSHLCER-LLERDCDVICLDNYFTGSKQNVLHLL--------DNPHFELL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ A+ ++ +++
Sbjct: 58 --RHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLRAKIM 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG D + P Y +G++ R Y K+ E
Sbjct: 115 QASTSEVYG---------DPSVHPQPESY----------WGNVNTIGFRSCYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ L + R FN GPRM P++G RV++ F LR +PL +
Sbjct: 156 TLFFDYRRQHNLRIKVARIFNTYGPRMH-------PNDG--RVVSNFIIQALRGEPLTVY 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GQ R+F Y+ D IEA L ++E P G + N GNP E T+ +LA+M+ E
Sbjct: 207 GQGQQTRSFCYVDDLIEAFLRLMETPDDFTGPV-NTGNP-GEFTILELAQMVIEY----- 259
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S ++ DD +R PD+T+ +L W PK L + L+ T+ Y
Sbjct: 260 --------TGSKSVIDYRPLPQDDPKQRRPDITLAKAKLDWEPKVPLTEGLKKTIEY 308
>gi|225431735|ref|XP_002269917.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Vitis
vinifera]
Length = 429
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 173/393 (44%), Gaps = 61/393 (15%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP 61
AG V L L + ++ I + G GF+GSHL ++++ I+ + + + ++L+
Sbjct: 94 AGGKVLLGLKRKALR---IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENLMH- 149
Query: 62 ESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
G + I+HD +E ++ D +LA +P Y P+ TI +N + L
Sbjct: 150 --HFGNPMFEL----IRHDV-VEPILLEVDQIYHLACPASPVYYKFNPVKTIKTNVVGTL 202
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
++ R + ST EVYG PL Q P + +P
Sbjct: 203 NMLGLAKRVGARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GV 245
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
R Y K+ E L A G+E I R FN GPRM G RV++ F
Sbjct: 246 RSCYDEGKRTAETLTMAYHRGAGIEVRIARIFNTYGPRMCIDDG---------RVVSNFV 296
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVR 299
LR++PL + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+
Sbjct: 297 AQALRKEPLTVYGDGKQTRSFQYVSDLVEGLIRLMEGE-----HVGPFNLGNP-GEFTML 350
Query: 300 QLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKT 358
+LA+++ E T+D ++K EF DD KR PD++ Q LGW P
Sbjct: 351 ELAQVVQE--------------TIDPNAKIEFRPNTEDDPHKRKPDISKAKQLLGWEPSV 396
Query: 359 SLWDLLESTLT-YQHRTYAEAIKQAVAKPVASS 390
SL + L ++ ++ R + + + V S+
Sbjct: 397 SLRNGLPLMVSDFRQRLFGDRKEVGAIASVVSN 429
>gi|24212751|ref|NP_710232.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. 56601]
gi|45655959|ref|YP_000045.1| dTDP-glucose 4-6-dehydratase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386072533|ref|YP_005986850.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. IPAV]
gi|417763008|ref|ZP_12410991.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. 2002000624]
gi|417768037|ref|ZP_12415972.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Bulgarica str. Mallika]
gi|417774751|ref|ZP_12422615.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. 2002000621]
gi|417784997|ref|ZP_12432702.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. C10069]
gi|418670133|ref|ZP_13231507.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|418672448|ref|ZP_13233787.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. 2002000623]
gi|418689451|ref|ZP_13250573.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. FPW2026]
gi|418707683|ref|ZP_13268503.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|418713287|ref|ZP_13274014.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. UI 08452]
gi|418725773|ref|ZP_13284389.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. UI 12621]
gi|418730867|ref|ZP_13289343.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. UI 12758]
gi|421087786|ref|ZP_15548622.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira santarosai str. HAI1594]
gi|421104150|ref|ZP_15564745.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Icterohaemorrhagiae str.
Verdun LP]
gi|421123307|ref|ZP_15583589.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. Brem 329]
gi|24193392|gb|AAN47250.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. 56601]
gi|45599192|gb|AAS68682.1| dTDP-glucose 4-6-dehydratase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353456322|gb|AER00867.1| nucleoside-diphosphate-sugar epimerase [Leptospira interrogans
serovar Lai str. IPAV]
gi|400349482|gb|EJP01775.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Bulgarica str. Mallika]
gi|400361596|gb|EJP17562.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. FPW2026]
gi|409941064|gb|EKN86698.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. 2002000624]
gi|409951786|gb|EKO06300.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. C10069]
gi|409960981|gb|EKO24730.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. UI 12621]
gi|410344051|gb|EKO95246.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. Brem 329]
gi|410365602|gb|EKP20995.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Icterohaemorrhagiae str.
Verdun LP]
gi|410430035|gb|EKP74410.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira santarosai str. HAI1594]
gi|410575593|gb|EKQ38611.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. 2002000621]
gi|410580576|gb|EKQ48398.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. 2002000623]
gi|410754423|gb|EKR16078.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Pyrogenes str.
2006006960]
gi|410772104|gb|EKR47298.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Grippotyphosa str. UI
08368]
gi|410774429|gb|EKR54437.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. UI 12758]
gi|410790370|gb|EKR84064.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans str. UI 08452]
gi|456823897|gb|EMF72334.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Canicola str. LT1962]
gi|456985852|gb|EMG21564.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira interrogans serovar Copenhageni str. LT2050]
Length = 312
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 164/356 (46%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCE++L E I +++ + K++ + + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNI---QKLLNDSKFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++ +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 HDVTDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + + ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKENITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 DGDQTRSFCYVDDLVEGIVRMM-NTENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK SL + + T+ Y
Sbjct: 262 SKIVHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVSLVEGIRKTIEY 306
>gi|354603695|ref|ZP_09021689.1| UDP-glucuronic acid decarboxylase 1 [Alistipes indistinctus YIT
12060]
gi|353348620|gb|EHB92891.1| UDP-glucuronic acid decarboxylase 1 [Alistipes indistinctus YIT
12060]
Length = 310
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 158/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC + L+ H ++ LD Y + HL+ G + R
Sbjct: 4 ILVTGGAGFIGSHLCAR-LVNDGHDVICLDNYFTGSKKNVWHLI------GRPNFELVRH 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
N+ + D NLA +P Y P+ T ++ + AL ++ E RL+
Sbjct: 57 NV-----INPYFAEVDEIYNLACPASPVHYQFDPIKTTKTSVMGALNMLGLAKETKARLL 111
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + E +G + R Y K+ E
Sbjct: 112 QASTSEVYG---------------DPIVHPQTES----YWGHVNPIGIRSCYDEGKRCAE 152
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L ++G+E I+R FN GP M P++G RV++ F L+ L +
Sbjct: 153 SLCMDYHRQHGIEIKIIRIFNTYGPGML-------PNDG--RVVSNFIVQALQGNDLTIY 203
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GQ R+F Y+ D IE ++ M+ +PA G + N+GNPH E T+ +LAE + + S
Sbjct: 204 GDGQQTRSFQYVDDLIEGMVRMMASPADFLGPV-NLGNPH-EFTILELAEKVIRLTGSRS 261
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A E P +DD +R PD+T+ ++L ++P T L + L+ T+ Y
Sbjct: 262 KIAFRELP-------------HDDPRQRQPDITLAREKLDYDPSTQLEEGLKHTIEY 305
>gi|241202963|ref|YP_002974059.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856853|gb|ACS54520.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 348
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 49/354 (13%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76
P + + G GF+GSHLCE LL H+++ LD ++ ++ + + DR +
Sbjct: 29 PKRVLVTGGAGFLGSHLCET-LLAAGHQVICLDNFSTGMRRNIVHLKRV--DRFNVVAHD 85
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
I H LE D NLA +P Y P+ T + + +L +++ + R++
Sbjct: 86 IVHPLDLE-----VDEIYNLACPASPPHYQADPIHTTKTCVLGSLNLLELAARTGARILQ 140
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG P P Q +Y+ P R Y K+ E L
Sbjct: 141 ASTSEVYGD------PNVHP--QVESYWGNVNSFGP---------RSCYDEGKRCAETLF 183
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+ +G+E I+R FN GPRM P +G RV++ F L Q + + G
Sbjct: 184 FDFHNTHGVEIKIIRIFNTYGPRMR-------PDDG--RVVSNFIVQALTGQDITIYGDG 234
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F ++ D I ++ M+ +P+ G + N+GNP E T+R+LAE + + S
Sbjct: 235 SQTRSFCFVDDLIGGMVRMMASPSSLTGPV-NLGNP-GEFTIRELAEQVIGLTGSRSQII 292
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+++ Q+L W PK L L T+ Y
Sbjct: 293 HRALPV-------------DDPRQRRPDISLAMQELDWRPKIDLSSGLRQTIDY 333
>gi|365900070|ref|ZP_09437945.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp.
STM 3843]
gi|365418881|emb|CCE10487.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp.
STM 3843]
Length = 354
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 159/369 (43%), Gaps = 51/369 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHLC+ +L I ++Y ++++ F +I+
Sbjct: 17 VIVTGGAGFIGSHLCDSLLQRGDEVICVDNLYTGSVRNV---RPLLNHRNFFFIEHDIRV 73
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
RL+G + D NLA +P Y P+ T+ + + + +++ + + R + ST
Sbjct: 74 PLRLQGSV---DRIYNLACPASPPHYQADPVGTMRTCVVGTINMLELARQKSARFLQAST 130
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG D + P YV G + R Y K+ E +I+
Sbjct: 131 SEVYG---------DPEVHPQPESYV----------GHVNPIGPRACYDEGKRAAEAVIF 171
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
+G+E + R FN GPRM E RV++ F LR +P+ + GQ
Sbjct: 172 DYHRLHGVEVKVARIFNTYGPRM---------LENDGRVVSNFIVQALRGEPITVYGSGQ 222
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F ++ D I + +++E+PA G FN+GNP E+T+ +A EV A+ ++
Sbjct: 223 QTRSFCFVDDLIRGLEMLMESPAAVTGP-FNLGNPQ-EMTIEAIAR---EVLARTKSKSP 277
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377
L +F DD +R P + + LGW P + +E+T+ Y + A
Sbjct: 278 L----------QFKPLPADDPKRRKPTIEAARRVLGWQPSIPIEKGIEATIAYFTLSLAT 327
Query: 378 AIKQAVAKP 386
+ A P
Sbjct: 328 EASKPSATP 336
>gi|144898173|emb|CAM75037.1| NAD-dependent epimerase/dehydratase [Magnetospirillum
gryphiswaldense MSR-1]
Length = 316
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 156/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L + H +L +D + D I HL+ G +
Sbjct: 8 VLVTGGAGFLGSHLCERLLADG-HDVLCVDNFYTGSKDNIAHLI------GNPYFEL--- 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +++ D NLA +P Y P+ T ++ A+ ++ N ++
Sbjct: 58 -IRHDVTFPLYLEV-DEIFNLACPASPVHYQRDPVQTTKTSVHGAINMLGLAKRINAKIF 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + ED GS+ R Y K+ E
Sbjct: 116 QASTSEVYG---------------DPEVHPQTEDYR----GSVNPIGPRACYDEGKRCAE 156
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++GL + R FN GPRM P +G RV++ F L +P+ L
Sbjct: 157 TLFFDYHRQHGLRIKVARIFNTYGPRMH-------PDDG--RVVSNFIVQALEGRPITLY 207
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F ++ D IE + ++ + G I N+GNP E+T+R+LAE + ++ S
Sbjct: 208 GDGSQTRSFCFVDDLIEGFIRLMNSADDITGPI-NLGNPQ-EMTIRELAEAVIKLTGAKS 265
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R P++ ++LGW PK +L D L T+ Y
Sbjct: 266 ELVIKPLPA-------------DDPLQRQPNIAKAREKLGWEPKVALEDGLHRTIDY 309
>gi|116250331|ref|YP_766169.1| epimerase [Rhizobium leguminosarum bv. viciae 3841]
gi|115254979|emb|CAK06053.1| putative epimerase [Rhizobium leguminosarum bv. viciae 3841]
gi|380875859|gb|AFF27633.1| UDP-xylose synthase [Rhizobium leguminosarum bv. viciae 3841]
Length = 348
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 49/354 (13%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76
P + + G GF+GSHLCE LL H+++ LD ++ ++ + + DR +
Sbjct: 29 PKRVLVTGGAGFLGSHLCET-LLAAGHQVICLDNFSTGMRRNIVHLKRV--DRFNVVAHD 85
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
I H LE D NLA +P Y P+ T + + +L +++ + R++
Sbjct: 86 IVHPLDLE-----VDEIYNLACPASPRHYQADPIHTTKTCVLGSLNLLELAARTGARILQ 140
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG P P Q +Y+ P R Y K+ E L
Sbjct: 141 ASTSEVYGD------PNVHP--QVESYWGNVNSFGP---------RSCYDEGKRCAETLF 183
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+ +G+E I+R FN GPRM P +G RV++ F L Q + + G
Sbjct: 184 FDFHNTHGVEIKIIRIFNTYGPRMR-------PDDG--RVVSNFIVQALTGQDITIYGDG 234
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F ++ D I ++ M+ +P+ G + N+GNP E T+R+LAE + + S
Sbjct: 235 SQTRSFCFVDDLIGGMVRMMASPSSLTGPV-NLGNP-GEFTIRELAEQVIGLTGSRSQII 292
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+++ Q+L W PK L L T+ Y
Sbjct: 293 HRALPV-------------DDPRQRRPDISLAMQELDWRPKIDLSSGLRQTIDY 333
>gi|296534395|ref|ZP_06896847.1| UDP-glucose 4-epimerase [Roseomonas cervicalis ATCC 49957]
gi|296265277|gb|EFH11450.1| UDP-glucose 4-epimerase [Roseomonas cervicalis ATCC 49957]
Length = 323
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 160/371 (43%), Gaps = 61/371 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE+ LL +L +D + D I HLL G R +
Sbjct: 8 ILVTGGAGFLGSHLCER-LLARGDDVLCVDNFFTGSRDNILHLL------GHPRFEL--- 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ TI + A+ ++ + +++
Sbjct: 58 -MRHDVTFPLYVEV-DEIYNLACPASPVHYQRNPVQTIKTAVHGAINMLGLAKRLDAKIL 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DP+ + ED G++ R Y K+ E
Sbjct: 116 QASTSEVYG---------------DPSVHPQPEDYR----GNVNPIGPRSCYDEGKRCAE 156
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L Y +N + + R FN GPRM P++G RV++ F LR +P+ L
Sbjct: 157 TLFYDYHRQNRVNIRVARIFNTYGPRMH-------PNDG--RVISNFIVQALRDEPITLF 207
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE ++ +++ P + N+GNP E T+R+LAE+ + +
Sbjct: 208 GEGTQTRSFCYVDDLIEGLIRLMDAPDEVTMPV-NIGNP-GEFTIRELAELTRRLTG--T 263
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
G + P DD +R PD+T LGW P +L L T+ +
Sbjct: 264 GAPLVHRPLP-----------ADDPMQRCPDITRARNLLGWEPAVTLEQGLVRTIAHFRA 312
Query: 374 TYAEAIKQAVA 384
T A Q A
Sbjct: 313 TLGLAAAQPGA 323
>gi|403508921|ref|YP_006640559.1| polysaccharide biosynthesis family protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402799176|gb|AFR06586.1| polysaccharide biosynthesis family protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 299
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 91 DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSF 150
D +LAA+ +Y RPLD I N + V++ E +++ ST EVYGK
Sbjct: 40 DTVYHLAAVVGVDNYLGRPLDVIDVNVVGTRNVLELAGEVGAKVVFASTSEVYGKN---- 95
Query: 151 LPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIV 210
D P R+D + + G RW YA +K L E ++A + G+ +I+
Sbjct: 96 --PDVPWRED----------AERVLGPTTADRWGYASSKALAEHYVFAFMRQYGVRASII 143
Query: 211 RPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIE 270
R FN GPR P+ V R L + LR + D G+ R+F YI+DA++
Sbjct: 144 RYFNLYGPRQR-------PAFLVSRSL----HRALRGIAPVVYDQGKQTRSFTYIEDAVQ 192
Query: 271 AVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEF 330
A L + + A+G FN+G E+++R + E++ E LE D+ +
Sbjct: 193 ATAL-VGRSSVADGECFNIGG-SEEISIRSVIELIIE-------STGLEADIADLDTGVS 243
Query: 331 YGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+G Y D ++R+PD + LGW+ T L + +E T +
Sbjct: 244 FGSAYQDLNRRVPDASKARSLLGWSATTPLQEGIERTTEW 283
>gi|48093463|gb|AAT40108.1| putative UDP-glucuronate decarboxylase 2 [Nicotiana tabacum]
Length = 346
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 156/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ +D + K L+ G R + R H
Sbjct: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVVDNFFTGSKDNLK--RWIGHPRFELKR----H 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG DP + E+ +G++ R Y K++ E L++
Sbjct: 148 SEVYG---------------DPLVHPQTEE----YWGNVNPIGVRSCYDEGKRVAETLMF 188
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F LR +PL + G
Sbjct: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRDEPLTVQAPGT 239
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D + ++ ++E N N+GNP E T+ +LAE++ E
Sbjct: 240 QTRSFCYVSDMVNGLIRLMEG---ENTGPINIGNP-GEFTMIELAELVKE---------- 285
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V++ S E DD +R PD+T + LGW PK L D L
Sbjct: 286 LINPKVEIKSVE---NTPDDPRQRKPDITKAKELLGWEPKVKLRDGL 329
>gi|453053738|gb|EMF01199.1| nucleotide-sugar dehydratase [Streptomyces mobaraensis NBRC 13819 =
DSM 40847]
Length = 321
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 149/360 (41%), Gaps = 52/360 (14%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLLEPESQTGADRIQFHRLNIK 78
+ G GF+GSHLCE++L E ++ D I HL G R F R ++
Sbjct: 11 ITGGAGFVGSHLCERLLAEGTEVCCVDNLATGSRDNIAHL------EGDPRFSFVRADVS 64
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ L + DL ++LA +P DY P+ T+ ++ N R + S
Sbjct: 65 APAALAAVPGPVDLVLHLACPASPVDYLRLPIQTMEVGSNGTRAALELARRNAARFLLTS 124
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P + P R+D Y+ P R Y +K+ E L+ A
Sbjct: 125 TSEVYGD------PLEHPQRED--YWGNVNPIGP---------RSVYDESKRYAEALVAA 167
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+G + IVR FN GPRM G R + F L +PL + G
Sbjct: 168 YRRTHGTDTAIVRLFNTYGPRMRADDG---------RAVPNFIRQALDGEPLTVAGDGGQ 218
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+ YI D ++ +L + AR + N+G +E TV +LA + ++
Sbjct: 219 TRSLTYIDDTVDGILALA---ARGHPGPVNIGG-TDETTVLELARFIVDL---------- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378
T S EF DD KR PD T+ + LGW+P+ + L+ T+ + RT A
Sbjct: 265 ---TGSASVIEFVDRPVDDPGKRRPDTTLARRLLGWSPRVDCAEGLKRTVEWFARTAPAA 321
>gi|195953980|ref|YP_002122270.1| NAD-dependent epimerase/dehydratase [Hydrogenobaculum sp. Y04AAS1]
gi|195933592|gb|ACG58292.1| NAD-dependent epimerase/dehydratase [Hydrogenobaculum sp. Y04AAS1]
Length = 313
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 162/357 (45%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLCE+ LLE ++++ +D + + IKHLL G + R
Sbjct: 5 ILITGGAGFIGSHLCER-LLEEGNEVICVDNFFTGSKENIKHLL------GNPYFEVLRH 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+I +E D NLA +P Y P+ T ++ + A+ ++ R++
Sbjct: 58 DITFPLYVE-----VDEIYNLACPASPIHYQFDPVQTTKTSVMGAINMLGLAKRLKIRIL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KED +G++ R Y K+ E
Sbjct: 113 QASTSEVYG---------------DPTVHPQKED----YWGNVNPIGPRACYDEGKRCAE 153
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ L+ +VR FN GPRM P++G RV++ F L+ + + +
Sbjct: 154 TLFFDYHRQHNLDIKVVRIFNTYGPRML-------PNDG--RVVSNFIVQALKGEDITVY 204
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F YI D ++ ++ M+ +P G + N+GNP E ++ +LAEM+ ++
Sbjct: 205 GDGSQTRSFCYIDDMVDGIIKMMNSPKGFTGPV-NLGNP-GEFSILELAEMILKL----- 257
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S F DD +R PD+T+ +L W PK L + L T+ Y
Sbjct: 258 --------TKSKSKIVFKPLPQDDPKQRQPDITLAKSRLNWEPKVPLQEGLIKTIEY 306
>gi|225851277|ref|YP_002731511.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase
1) (UXS-1) [Persephonella marina EX-H1]
gi|225646010|gb|ACO04196.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase
1) (UXS-1) [Persephonella marina EX-H1]
Length = 314
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 154/357 (43%), Gaps = 55/357 (15%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFH 73
+ + + GA GFIGSHLC++ L E + ++ LD + D I HL G + +F
Sbjct: 1 MKVLITGAAGFIGSHLCDRFLKEGFY-VIGLDNFLTGSPDNIAHLF------GEENFKFI 53
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+ ++ + + I DL ++ A +P DY P+ T+ + + L + R
Sbjct: 54 KYDVTNYIYVPDDI---DLVLHFACPASPVDYLQHPIHTMKVDSLGTLHTLGLAKAKKAR 110
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
I ST E+YG P+ P Q Y+ P R Y AK+ E
Sbjct: 111 YIFASTSEIYGD------PQVHP--QPETYWGNVNPIGP---------RSVYDEAKRFSE 153
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
+ A E+ ++ IVR FN GPRM G RV+ F + LR + L +
Sbjct: 154 AMTMAYHREHHIDVRIVRIFNTYGPRMRLNDG---------RVVPNFISQALRGEDLTVY 204
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F YI D +E + + G +FN+GNP +E + A+++ E S
Sbjct: 205 GDGSQTRSFCYIDDLVEGIF-RVSVKEGIEGEVFNLGNP-DEYRIIDFAKIIIEKTGSRS 262
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
G P DD +R PD+T + LGW PK SL + LE+T+ Y
Sbjct: 263 GIVFRPLPE-------------DDPRQRCPDITKAKEVLGWEPKVSLDEGLENTIQY 306
>gi|408526897|emb|CCK25071.1| UDP-glucuronic acid decarboxylase 1 [Streptomyces davawensis JCM
4913]
Length = 367
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 157/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GGF+GSHLCE LL ++ LD ++ + I HLL + +FH
Sbjct: 3 VAVTGGGGFLGSHLCEA-LLRRGDSVVCLDNFSTGDPENIAHLLSDPA------FEFHHA 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + G + D +LA+ +P DY +PL+T+ ++ +N R I
Sbjct: 56 DVSVSVEIRGRV---DAVAHLASPASPPDYLRQPLETLAVGSRGTENALRLALRHNSRFI 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST E+YG P P Q+ AY+ P R Y AK+ E +
Sbjct: 113 LASTSEIYGD------PLVHP--QEEAYWGNVNSIGP---------RSVYDEAKRYAEAV 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +GL I R FN GPRM P +G RV++ F L +PL +
Sbjct: 156 SAAYRRTHGLSVGIARIFNTYGPRMR-------PHDG--RVVSSFITQALTGEPLTIYGD 206
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D + ++ ++++ FN+GNP E TV +LAE++ +
Sbjct: 207 GTQTRSFCYVDDLVRGLVALLDSSEMGP---FNLGNP-VERTVSELAEIVRAM------- 255
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S+ +++ DD +R P +T + LGW P+ + + L T+ Y
Sbjct: 256 ------TGSASAVKYHPLPVDDPGRRRPVITRAREVLGWQPEIDITEGLRRTVAY 304
>gi|337279248|ref|YP_004618720.1| dTDP-glucose 4,6-dehydratase [Ramlibacter tataouinensis TTB310]
gi|334730325|gb|AEG92701.1| dTDP-glucose 4,6-dehydratase-like protein [Ramlibacter
tataouinensis TTB310]
Length = 320
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 156/363 (42%), Gaps = 57/363 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E H++L +D + + HLL G R +
Sbjct: 10 VLVTGGAGFLGSHLCERLLGEG-HEVLCVDNFFTGSKRNVAHLL------GHPRFEL--- 59
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD L +++ D NLA +P Y P+ T ++ + AL +++ R+
Sbjct: 60 -MRHDVVLPLQVEV-DQIYNLACPASPPHYQHDPVQTTKTSVLGALHLLELARRTGARIF 117
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P +D +V C Y K+ E L
Sbjct: 118 QASTSEVYGD------PERHPQAEDYWGHVNPVGVRSC-----------YDEGKRCAETL 160
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
++G++ I R FN GPRM P++G RV++ F LR +PL +
Sbjct: 161 FMDYHRQHGVDVRIARIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEPLTVYGQ 211
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R+F Y+ D +E + + A G I N+GNP E T+ LAE + + S
Sbjct: 212 GEQTRSFCYVDDLVEGFVRFMRRDAPCPGPI-NLGNP-GEFTIAALAEQVINLTNSRSPI 269
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
P DD +R PD+ ++LGW P L + L T+ Y R
Sbjct: 270 VHKPLPA-------------DDPTQRRPDIARAREKLGWEPTVQLREGLVRTIAYFDRLL 316
Query: 376 AEA 378
E
Sbjct: 317 KEG 319
>gi|373488210|ref|ZP_09578875.1| NAD-dependent epimerase/dehydratase [Holophaga foetida DSM 6591]
gi|372006535|gb|EHP07167.1| NAD-dependent epimerase/dehydratase [Holophaga foetida DSM 6591]
Length = 329
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 158/361 (43%), Gaps = 62/361 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE++L + H +L +D Y I HLL D +F L
Sbjct: 4 ILVTGGAGFLGSHLCERLLAQG-HDVLCVDNYFTGRKSNIAHLL--------DNPRFEAL 54
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD L L D NLA +P Y P+ TI + A+ V++ R++
Sbjct: 55 --RHDITLP-LQMEVDQIYNLACPASPIHYQFDPVQTIKTCVHGAINVLELARRTGARIL 111
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP+ + ED +G++ R Y K+ E
Sbjct: 112 QASTSEVYG---------------DPSVHPQTED----YWGNVNPIGLRSCYDEGKRCAE 152
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L ++ + G++ + R FN GPRM G RV++ F L+ +P+ +
Sbjct: 153 SLFFSYHRQYGVDIRVPRIFNTYGPRMHEKDG---------RVVSNFIVQALKGEPITIY 203
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE ++ ++EN A + N+GNP E T+R+LAE E+ S
Sbjct: 204 GNGSQTRSFCYVDDLIEGLIALMENEA-SRAVPVNLGNP-KEFTIRELAEATIELCNSSS 261
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT-YQH 372
P +DD +R PD+ + L W P +L + L T+ +Q
Sbjct: 262 ELTLAPLP-------------HDDPKQRQPDIRLAMGNLNWRPTVALHEGLTLTIADFQT 308
Query: 373 R 373
R
Sbjct: 309 R 309
>gi|46241617|gb|AAS83002.1| dTDP-glucose 4,6 dehydratase [Azospirillum brasilense]
Length = 349
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 160/358 (44%), Gaps = 63/358 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLL-EPESQTGADRIQFHR 74
+ + G GF+GSHLCE+ L+ +++ +D Y I HLL P +T
Sbjct: 41 VLVTGGAGFLGSHLCER-LIARGDEVVCVDNYFTGSRRNIAHLLGNPNFET--------- 90
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD +++ D NLA +P Y P+ T ++ A+ ++ N R+
Sbjct: 91 --IRHDVTFPLYVEV-DQIFNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRLNARI 147
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLI 192
+ ST EVYG DPA + E+ +G++ R Y K+
Sbjct: 148 LQASTSEVYG---------------DPAVHPQPEE----YWGNVNPIGPRSCYDEGKRCA 188
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L + ++ L ++R FN GPRM P++G RV++ F L+ +P+ +
Sbjct: 189 ETLFFDYHRQHQLPIKVMRIFNTYGPRMH-------PNDG--RVVSNFIMQALKGEPITV 239
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F Y+ D IE ++ ++++PA G I N+GNP E T+ +LAE V A
Sbjct: 240 YGDGSQTRSFCYVDDLIEGMIRLMDSPAEVTGPI-NIGNP-GEFTMLELAE---HVVALT 294
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +E + DD +R PD+T L W P L D LE T+ Y
Sbjct: 295 GSRSTIEHRPLP----------QDDPKQRRPDITKAKSLLEWEPTIPLRDGLERTIHY 342
>gi|261220376|ref|ZP_05934657.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94]
gi|260918960|gb|EEX85613.1| NAD-dependent epimerase/dehydratase [Brucella ceti B1/94]
Length = 337
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 160/359 (44%), Gaps = 65/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L E H ++ +D ++ + I+HLL D F
Sbjct: 20 VLVAGGAGFLGSHLCERLLNEG-HSVICVDNFSTGRIENIRHLLN------FDGFSF--- 69
Query: 76 NIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD ++ DL + NL +P Y P+ T+ +N I +L +++ +
Sbjct: 70 -IRHD-----IVNTLDLRVDEIYNLVCPASPPHYQADPVHTMKTNVIGSLNLLELAAHYK 123
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R+ ST EVYG D + P Y ++ FG R Y K+
Sbjct: 124 ARIFQASTSEVYG---------DPHVHPQPENYWGNVNS----FGP----RSCYDEGKRS 166
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + + G++ IVR FN GPRM P +G RV++ F L+ + +
Sbjct: 167 AETLFHDFHQQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDIT 217
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F Y+ D IE ++ +P + N+GNP E TV LAE + +
Sbjct: 218 VYGDGSQTRSFCYVDDLIEGFHRLMYSPHAIRVPV-NIGNP-GEFTVGALAEQIIAM--- 272
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S +Y DD +R PD+T+ ++LGW P +L LE T+ Y
Sbjct: 273 ----------TGSRSRIVYYPLPVDDPRQRRPDITVAKRELGWEPTVALAQGLEPTIAY 321
>gi|171320363|ref|ZP_02909403.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5]
gi|171094410|gb|EDT39474.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5]
Length = 313
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 159/356 (44%), Gaps = 58/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
++ + G GF+GSHLCE+ L+ + ++ +D ++ I+HL+ ++ F
Sbjct: 5 SVLVTGGAGFLGSHLCER-LVHAGYDVMCVDNFHTGSKRNIEHLI--------GQVNFEV 55
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD L L AD N+A +P Y + P+ T+ + + A+ ++ R+
Sbjct: 56 --IRHDVWLP-LYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRCGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG +Q P + +P R Y K+ E
Sbjct: 113 LQASTSEVYGDA-----------QQHPQQESYWGNVNP------NGLRACYDEGKRCAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++G++ +VR FN GPRM G RV++ F LR +P+ L
Sbjct: 156 LFFDYHRQHGVDIRVVRIFNTYGPRMRADDG---------RVVSNFIMQALRGEPITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E +L M+E N+GNP +E+T+R+LAE + +
Sbjct: 207 DGSQTRSFCYVDDLVEGLLRMMEQDDDTG--PINLGNP-SEITIRELAECVLRL------ 257
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S E+ DD +R PD+ Q+L W P +L D L+ T+ +
Sbjct: 258 -------TGSKSRIEYRPLPADDPLQRRPDIGRARQRLDWQPGIALEDGLKETIAH 306
>gi|319793709|ref|YP_004155349.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS]
gi|315596172|gb|ADU37238.1| NAD-dependent epimerase/dehydratase [Variovorax paradoxus EPS]
Length = 350
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 154/355 (43%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ LL H++L D + I+HLL G R +
Sbjct: 10 VLVTGGAGFLGSHLCER-LLARGHEVLCADNFFTGTRRNIEHLL------GDPRFEL--- 59
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD L +++ D NLA +P Y P+ T ++ A+ ++ + R++
Sbjct: 60 -MRHDVTLPLYVEV-DQIYNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRVHARIL 117
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG D + P Y K + R Y K+ E L
Sbjct: 118 QASTSEVYG---------DPDVHPQPESYWGKVNPIGV--------RSCYDEGKRCAETL 160
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++G++ + R FN GPRM P +G RV++ F LR P+ +
Sbjct: 161 FFDYHRQHGVDIRVARIFNTYGPRMH-------PRDG--RVVSNFIVQALRGDPITVYGD 211
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F ++ D +E +L +E A G + N+GNP E TVR+LAE + + S
Sbjct: 212 GLQTRSFCFVDDLVEGLLRFMEAEPGAPGPV-NIGNP-GEFTVRELAEEVIRLTGSTSRI 269
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A P+ DD +R PD+ + GW P L + L T+ Y
Sbjct: 270 AFAPLPS-------------DDPMQRRPDVRLARSMFGWEPHIQLQEGLRKTIDY 311
>gi|152974263|ref|YP_001373780.1| NAD-dependent epimerase/dehydratase [Bacillus cytotoxicus NVH
391-98]
gi|152023015|gb|ABS20785.1| NAD-dependent epimerase/dehydratase [Bacillus cytotoxicus NVH
391-98]
gi|293339156|gb|ADE43880.1| UDP-XylNAc synthase [Bacillus cytotoxicus NVH 391-98]
Length = 321
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 164/353 (46%), Gaps = 46/353 (13%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
C+I G GFIGSHL E+ L++ H + +D Y K K+ E TG I ++I
Sbjct: 5 CLITGGAGFIGSHLAEE-LVKRGHPVTIVDNFYKGKSKY---HEELTG--NIPIIPISIL 58
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ + L+ D+ +LAAI + ++ I +NF +++ + K++I S
Sbjct: 59 DKNSMHELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVIFAS 118
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYGK F D L +G+ K RWSYA K L E L
Sbjct: 119 TSEVYGKGTPPFSEDDDRL-----------------YGATSKIRWSYAICKTLEETLCLG 161
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQ 257
A GL TIVR FN GPR DGP GV PR F L+ L + G+
Sbjct: 162 Y-ALQGLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDLLVYGDGK 211
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R F Y+ DA+EA + ++ + NG I N+G+ +E +++++A+ + ++ S
Sbjct: 212 QTRCFTYVSDAVEATIAAMDE--KVNGEIINIGS-EDEKSIQEVAQDIHQLTHSSS---- 264
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V ++ Y G+++ R PD+T + + ++P S L+ T+ +
Sbjct: 265 ---KIVHVPFEKVYPHGFEEIPNRKPDVTKLKEMCQFHPNVSWEQGLKETIQW 314
>gi|392375823|ref|YP_003207656.1| sugar-nucleotide epimerase/dehydratase [Candidatus Methylomirabilis
oxyfera]
gi|258593516|emb|CBE69857.1| putative sugar-nucleotide epimerase/dehydratase [Candidatus
Methylomirabilis oxyfera]
Length = 322
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 159/355 (44%), Gaps = 53/355 (14%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALD----VYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GSHLC++++ E H+++ LD D + HL+ G D +F +L++
Sbjct: 6 ITGGAGFLGSHLCDRLIKEG-HQVICLDNLITGMVDNVAHLI------GHDAFRFIKLDV 58
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
++G + D ++ A+ +P DY P+ T+ + + R +
Sbjct: 59 TEYLYIDGPL---DYVLHFASPASPIDYQRLPIQTLKVGSLGTHKALGLAKAKGARFLLA 115
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EVYG P P R++ Y+ P R Y AK+ E +
Sbjct: 116 STSEVYGD------PTIHPQREE--YWGNVNPVGP---------RGVYDEAKRFAEAMTM 158
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A +GL+ I R FN GPRM P++G RV++ F N LR +P+ + G
Sbjct: 159 AYHRYHGLDTRIARIFNTYGPRMR-------PNDG--RVVSNFINQALRGEPVTVYGDGS 209
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
R+F Y+ D +E + ++ +G + N+GNP E TV LA M+ + S +
Sbjct: 210 QTRSFCYVSDLVEGLYRLL-----MSGEVNPVNIGNP-KEFTVLDLAHMVLKAVGGPSTD 263
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ PT + + DD R PD+ + ++ GW PK + + L T+ Y
Sbjct: 264 ST--GPTTGIELRPL---PVDDPRVRQPDIGLAQEKFGWEPKVQIAEGLALTIEY 313
>gi|398351218|ref|YP_006396682.1| UDP-glucose 4-epimerase [Sinorhizobium fredii USDA 257]
gi|390126544|gb|AFL49925.1| putative UDP-glucose 4-epimerase [Sinorhizobium fredii USDA 257]
Length = 347
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 164/357 (45%), Gaps = 49/357 (13%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH 73
P P I + G GF+GSHLCE +LLE H+++ D ++ ++ +EP +F
Sbjct: 25 PGIPKRILVTGGAGFLGSHLCE-LLLEAGHEVICADNFSTGLRRNIEPLK-------RFD 76
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
R ++ ++ + D NLA +P Y P+ T + + +L +++ + R
Sbjct: 77 RFSLVAHDIVQPIDLEVDEIYNLACPASPPHYQADPIHTTKTCVLGSLNMLELAARYGAR 136
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
++ ST EVYG P+ P Q +Y+ + +P FG R Y K+ E
Sbjct: 137 ILQASTSEVYGD------PQVHP--QVESYW---GNVNP--FGP----RSCYDEGKRCAE 179
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + + +VR FN GPRM P +G RV++ F L+ + + +
Sbjct: 180 TLFFDFHKAHQVAIKVVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDITIY 230
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F ++ D I+ + ++ +PA G I N+GNP E T+ +LAE + E+ S
Sbjct: 231 GDGSQTRSFCFVDDLIDGFIRVMASPASLTGPI-NLGNP-GEFTIGELAEQVIELTGSRS 288
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A P DD +R PD+++ ++LGW P+ L L T+ +
Sbjct: 289 KIAYRPLPV-------------DDPRQRRPDISLAERELGWRPEVELAAGLVRTIDH 332
>gi|406895046|gb|EKD39711.1| hypothetical protein ACD_75C00313G0003 [uncultured bacterium]
Length = 314
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 65/363 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN--- 76
I + G GF+GSHLCEK LL H++L +D + TG+ + FH L+
Sbjct: 6 IAVTGGAGFLGSHLCEK-LLGQGHEVLCIDNF------------YTGSKQNIFHLLDNPL 52
Query: 77 ---IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
++HD +++ D NLA +P Y P+ T ++ A+ ++ +
Sbjct: 53 FELLRHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVKAK 111
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQL 191
+ ST EVYG D + P Y +G + R Y K+
Sbjct: 112 IFQASTSEVYG---------DPQIHPQPETY----------WGHVNPNGIRACYDEGKRC 152
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + ++ L+ + R FN GPRM G RV++ F LR +P+
Sbjct: 153 AETLFFDYHRQHNLKIKVARIFNTYGPRMQADDG---------RVVSNFIVQALRGEPIT 203
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F ++ D IE +L++ +P G + NVGNP E T+ +LAE +V A
Sbjct: 204 IYGDGSQSRSFCFVDDLIEVFVLLMNSPDDLVGPV-NVGNP-KEFTILELAE---KVIAM 258
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
V + + F DD +R PD+T+ ++LGW P +L + L+ T+ Y
Sbjct: 259 VGTNSQII----------FKPLPMDDPRQRQPDITLAREKLGWTPTVTLEEGLKPTIEYF 308
Query: 372 HRT 374
+T
Sbjct: 309 SKT 311
>gi|398340683|ref|ZP_10525386.1| nucleoside-diphosphate-sugar epimerase [Leptospira kirschneri
serovar Bim str. 1051]
Length = 312
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 163/356 (45%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCEK+L E I +++ + K++ + + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCEKLLKEGNEVICLDNLHTGRKKNI---QKLLNDSKFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 HDITDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + + ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRNHKIDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKEDITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 EGDQTRSFCYVDDLVEGIVRMM-NVENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK L + + T+ Y
Sbjct: 262 SKIIHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVPLVEGIRKTIEY 306
>gi|404319667|ref|ZP_10967600.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi CTS-325]
Length = 322
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 159/358 (44%), Gaps = 59/358 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE++L E I + ++++L + D F ++H
Sbjct: 6 ILVAGGAGFLGSHLCERLLNEGNFVICVDNFSTGRLENL---RNLLRYDTFSF----VRH 58
Query: 80 DSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
D ++ DL + NLA +P Y P+ T+ ++ I +L +++ + R+
Sbjct: 59 D-----IVNPIDLPVDEIYNLACPASPPHYQADPVHTMKTSVIGSLNLLELAAHYQARIF 113
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q AY+ P R Y K+ E L
Sbjct: 114 QASTSEVYGD------PQTHP--QPEAYWGNVNSFGP---------RSCYDEGKRSAETL 156
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
Y + G++ IVR FN GPRM P +G RV++ F L+R+ + +
Sbjct: 157 FYDFHKQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKREDITIYGD 207
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D IE ++ + + N+GNP E TVR+LAE + + S
Sbjct: 208 GSQTRSFCYVDDLIEGFSRLMSSQVQKP---VNLGNP-GEFTVRELAEQIIALTNSSSRI 263
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
PT DD +R PD+ + ++LGW P+ +L + L+ T+ Y R
Sbjct: 264 VYRPLPT-------------DDPRQRRPDIMLAKRELGWEPQIALVEGLKQTIAYFER 308
>gi|224100953|ref|XP_002312082.1| predicted protein [Populus trichocarpa]
gi|118487220|gb|ABK95438.1| unknown [Populus trichocarpa]
gi|222851902|gb|EEE89449.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 156/345 (45%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++++ ++++ D Y K L+ G R + I+H
Sbjct: 35 ILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLK--KWIGHPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P P QD +Y+ + +P R Y K++ E L++
Sbjct: 148 SEVYGD------PLVHP--QDESYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 190
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 191 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRNEPLTVQAPGTQT 241
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E L
Sbjct: 242 RSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMMELAETVKE----------LI 287
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V++ E DD +R PD+T + LGW PK L D L
Sbjct: 288 NPEVEIIGVE---NTPDDPRQRKPDITKAKELLGWEPKIKLRDGL 329
>gi|338534738|ref|YP_004668072.1| NAD-dependent epimerase/dehydratase family protein [Myxococcus
fulvus HW-1]
gi|337260834|gb|AEI66994.1| NAD-dependent epimerase/dehydratase family protein [Myxococcus
fulvus HW-1]
Length = 322
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 153/355 (43%), Gaps = 56/355 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ ++G GF+GSHLCE++L + ++A+D + L + G F + +I
Sbjct: 9 VAVLGGAGFVGSHLCERLLDDGAAAVIAVDNLITGNEENL--RTLNGRPGFSFVKADITE 66
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+EG + D N+A+ +P DY PL+T+ I +K N + ST
Sbjct: 67 GIPVEGPL---DYVFNMASPASPIDYAQLPLETLRVGSIGTENGLKLAEANQAVFLMAST 123
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG DP + +ED +G++ R Y AK+ E +
Sbjct: 124 SEVYG---------------DPLVHPQRED----YWGNVNPIGPRSVYDEAKRYSEAITA 164
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A G G++ IVR FN GPRM G RV+ F L+ + + G
Sbjct: 165 AYGRTKGVQVRIVRIFNTYGPRMRLNDG---------RVVPAFVGQALKGEDFTVFGDGS 215
Query: 258 SQRTFIYIKDAIEAV--LLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
R+F Y+KD ++ + L++ + P N+GNP E+T+RQ AE +
Sbjct: 216 QTRSFCYVKDLVDGLVRLMLSDEP-----DPVNIGNPR-EMTIRQFAEAVRAAAGGGG-- 267
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A +E+P DD +R PD+T LGW PK L + L T+ +
Sbjct: 268 AIIEKPLP-----------RDDPKQRQPDITRARTLLGWEPKVPLEEGLRETIAW 311
>gi|418677570|ref|ZP_13238844.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri serovar Grippotyphosa str. RM52]
gi|418686736|ref|ZP_13247901.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|418693575|ref|ZP_13254625.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri str. H1]
gi|418740530|ref|ZP_13296907.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri serovar Valbuzzi str. 200702274]
gi|421088280|ref|ZP_15549105.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri str. 200802841]
gi|421106702|ref|ZP_15567266.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri str. H2]
gi|421129431|ref|ZP_15589631.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri str. 2008720114]
gi|400320760|gb|EJO68620.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri serovar Grippotyphosa str. RM52]
gi|409958601|gb|EKO17492.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri str. H1]
gi|410002911|gb|EKO53360.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri str. 200802841]
gi|410008168|gb|EKO61843.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri str. H2]
gi|410358806|gb|EKP05915.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri str. 2008720114]
gi|410738807|gb|EKQ83540.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri serovar Grippotyphosa str.
Moskva]
gi|410751907|gb|EKR08883.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira kirschneri serovar Valbuzzi str. 200702274]
Length = 312
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 163/356 (45%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCEK+L E I +++ + K++ + + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCEKLLKEGNEVICLDNLHTGRKKNI---QKLLNDSKFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 HDITDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + + ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKEDITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 EGDQTRSFCYVDDLVEGIVRMM-NVENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK L + + T+ Y
Sbjct: 262 SKIIHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVPLVEGIRKTIEY 306
>gi|296446644|ref|ZP_06888585.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium
OB3b]
gi|296255872|gb|EFH02958.1| NAD-dependent epimerase/dehydratase [Methylosinus trichosporium
OB3b]
Length = 327
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 159/351 (45%), Gaps = 49/351 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE+ LL+ H++L +D + + +E + DR +F L +H
Sbjct: 6 ILVTGGAGFLGSHLCER-LLDDGHEVLCVDNFFTGRRRNIE---RLFDDR-KFELL--RH 58
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +++ D NLA +P Y P+ T ++ I A+ ++ ++ ST
Sbjct: 59 DVTFPLFVEV-DEIYNLACPASPIHYQFDPVQTTKTSVIGAINMLGLAKRLRVKVFQAST 117
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P P Q +Y+ P R Y K+ E L +
Sbjct: 118 SEVYGD------PTVHP--QPESYWGHVNPLGP---------RACYDEGKRCAETLFFDY 160
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++ L+ + R FN GPRM P +G RV++ F L+ QP+ + GQ
Sbjct: 161 HRQHRLKIKVARIFNTYGPRMH-------PKDG--RVVSNFIVQALQNQPITVYGEGQQT 211
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D I + +++ P G I N+GNP E T+RQLAE + ++ S
Sbjct: 212 RSFCYVDDLIRGFVALMDAPDAVTGPI-NIGNP-TEFTIRQLAETVIDLTGSRS------ 263
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P V F DD +R PD++ + LGW P +L + L T+ Y
Sbjct: 264 -PLV------FEPLPADDPKQRRPDISAAERLLGWRPTIALREGLVRTIAY 307
>gi|50659028|gb|AAT80327.1| UDP-D-glucuronate decarboxylase [Hordeum vulgare]
Length = 400
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 170/375 (45%), Gaps = 62/375 (16%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + + + G+ GF+GSHL ++++ I+ +++ + ++++ G +
Sbjct: 78 KGLRVLVTGSAGFVGSHLVDRLVARGDSVIVVDNLFTGRKENVMH---HFGNPNFEM--- 131
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ + +
Sbjct: 132 -IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVVGTLNMLGLAKRIGAKFL 189
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG PL Q P + +P R Y K+ E L
Sbjct: 190 LTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKRTAETL 232
Query: 196 I--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
Y GA LE I R FN GPRM G RV++ F LR++PL +
Sbjct: 233 TMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLTVY 281
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAK 311
G+ R+F Y+ D +E ++ ++E HI FN+GNP E T+ +LA+++ +
Sbjct: 282 GDGKQTRSFQYVSDLVEGLMRLMEG-----DHIGPFNLGNP-GEFTMLELAKVVQD---- 331
Query: 312 VSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT- 369
T+D +++ EF DD KR PD+T +QLGW PK +L D L +T
Sbjct: 332 ----------TIDPNARIEFRENTQDDPHKRKPDITKAKEQLGWEPKIALRDGLPLMVTD 381
Query: 370 YQHRTYAEAIKQAVA 384
++ R + + A A
Sbjct: 382 FRKRIFGDQDSAATA 396
>gi|115350205|ref|YP_772044.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD]
gi|115280193|gb|ABI85710.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria AMMD]
Length = 313
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 161/356 (45%), Gaps = 58/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
++ + G GF+GSHLCE+ L+ + ++ +D ++ I+HL+ ++ F
Sbjct: 5 SVLVTGGAGFLGSHLCER-LVHAGYDVMCVDNFHTGSKRNIEHLI--------GQVNFEV 55
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD L L AD N+A +P Y + P+ T+ + + A+ ++ R+
Sbjct: 56 --IRHDVWLP-LYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRCGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG +Q P + +P R Y K+ E
Sbjct: 113 LQASTSEVYGDA-----------QQHPQQESYWGNVNP------NGLRACYDEGKRCAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++G++ +VR FN GPRM G RV++ F LR +P+ L
Sbjct: 156 LFFDYHRQHGVDIRVVRIFNTYGPRMRADDG---------RVVSNFIMQALRGEPITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E +L M+ N G I N+GNP +E+T+R+LAE + +
Sbjct: 207 DGSQTRSFCYVDDLVEGLLRMM-NQDDDTGPI-NLGNP-SEITIRELAECVLRL------ 257
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S E+ DD +R PD+ Q+L W P +L D L+ T+ +
Sbjct: 258 -------TGSKSRIEYRPLPADDPLQRRPDIGRARQRLDWQPGIALEDGLKETIAH 306
>gi|405375674|ref|ZP_11029700.1| dTDP-glucose 4,6-dehydratase [Chondromyces apiculatus DSM 436]
gi|397086038|gb|EJJ17182.1| dTDP-glucose 4,6-dehydratase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 322
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 154/355 (43%), Gaps = 56/355 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ ++G GF+GSHLCE++L + ++A+D + ++L + G F + +I
Sbjct: 9 VAVLGGAGFVGSHLCERLLDDGAAVVIAVDNLITGNEENLCTLNGRPG---FSFVKADIT 65
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+EG + D N+A+ +P DY PL+T+ I +K N + S
Sbjct: 66 EGIPVEGPL---DYVFNMASPASPIDYAQLPLETLRVGSIGTENGLKLAEANQAVFLMAS 122
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLI 196
T EVYG DP + +ED +G++ R Y AK+ E +
Sbjct: 123 TSEVYG---------------DPLVHPQRED----YWGNVNPIGPRSVYDEAKRYSEAIT 163
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
A G G++ IVR FN GPRM G RV+ F L+ + + G
Sbjct: 164 AAYGRTKGVQVRIVRIFNTYGPRMRLNDG---------RVVPAFVGQALKGEDFTVFGDG 214
Query: 257 QSQRTFIYIKDAIEA-VLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
R+F Y+KD ++ V LM+ + + N+GNP E+T+RQ AE +
Sbjct: 215 SQTRSFCYVKDLVDGLVRLMLSDESSP----VNIGNPR-EMTIRQFAEAVRAAAGGGG-- 267
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+E+P DD +R PD+T LGW PK L + L T+ +
Sbjct: 268 TIIEKPLPK-----------DDPKQRQPDITRAKTLLGWEPKVPLEEGLRETIAW 311
>gi|224054811|ref|XP_002298368.1| predicted protein [Populus trichocarpa]
gi|118481127|gb|ABK92517.1| unknown [Populus trichocarpa]
gi|222845626|gb|EEE83173.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 153/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L G R + I+H
Sbjct: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLR--KWIGQPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG D + P Y +G++ R Y K++ E L++
Sbjct: 148 SEVYG---------DPLVHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 188
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F LR +PL + G
Sbjct: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEPLTVQKPGT 239
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E
Sbjct: 240 QTRSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMTELAETVKE---------- 285
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V+++ E DD +R PD+T LGW PK L D L
Sbjct: 286 LINPGVEINMVE---NTPDDPRQRKPDITKAKALLGWEPKVKLRDGL 329
>gi|213950353|gb|ACJ54441.1| UDP-glucuronic acid decarboxylase 2 [Gossypium hirsutum]
Length = 442
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 159/352 (45%), Gaps = 65/352 (18%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL ++++ I+ + + + ++++ G +
Sbjct: 116 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---HFGNPNFEL--- 169
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E L+ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 170 -IRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 227
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KE +G++ R Y K+ E
Sbjct: 228 LTSTSEVYG---------------DPLQHPQKE----TYWGNVNPIGVRSCYDEGKRTAE 268
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F LR++PL
Sbjct: 269 TLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLT 317
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LAE++ E
Sbjct: 318 VYGDGKQTRSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELAEVVQE-- 369
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
T+D ++K EF DD KR PD++ + LGW PK SL
Sbjct: 370 ------------TIDPNAKIEFRPNTEDDPHKRKPDISRAKELLGWQPKVSL 409
>gi|114321949|ref|YP_743632.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228343|gb|ABI58142.1| NAD-dependent epimerase/dehydratase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 317
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 157/358 (43%), Gaps = 63/358 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLE-PESQTGADRIQFHR 74
+ + G GFIGSHLCE++L E H++L +D + I HL + PE +
Sbjct: 9 VLVTGGAGFIGSHLCERLLAEG-HEVLCVDNFFTGTKQSIAHLRDYPEFEA--------- 58
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD +++ ++ NLA +P Y P+ T ++ A+ ++ R+
Sbjct: 59 --IRHDITFPLYLEVEEI-YNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRLKARI 115
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLI 192
+ ST EVYG D + P YV GS+ R Y K+
Sbjct: 116 LQASTSEVYG---------DPSVHPQPESYV----------GSVNPIGPRSCYDEGKRCA 156
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L + ++ LE + R FN GPRM P +G RV++ F L +P+ +
Sbjct: 157 ETLFFDYYKQHALEIKVARIFNTYGPRMH-------PHDG--RVVSNFIVQALSGEPITV 207
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G+ R+F Y+ D ++ + ++ P G I N+GNP E T+R LAE + E+
Sbjct: 208 YGEGRQSRSFCYVDDLVDGLARLMATPPEVTGPI-NLGNP-VEFTIRALAERVIEL---- 261
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S F DD +R PD++ +L W P T+L + L T+ Y
Sbjct: 262 ---------TGSKSRLVFRPLPQDDPRQRCPDISRARAELDWAPVTALDEGLRRTIEY 310
>gi|449449982|ref|XP_004142743.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis
sativus]
gi|449483862|ref|XP_004156715.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis
sativus]
Length = 346
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 156/345 (45%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L + G R + I+H
Sbjct: 35 ILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNL--KKWIGHPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P P QD +Y+ + +P R Y K++ E L++
Sbjct: 148 SEVYGD------PLIHP--QDESYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 190
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 191 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRSEPLTVQAPGTQT 241
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E L
Sbjct: 242 RSFCYVSDMVDGLIRLMEG---DNTGPINIGNP-GEFTMLELAETVKE----------LI 287
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V++ E DD +R PD+T + LGW PK L D L
Sbjct: 288 NPAVEIIMVE---NTPDDPRQRKPDITKAKELLGWEPKIKLRDGL 329
>gi|386394512|ref|ZP_10079293.1| nucleoside-diphosphate-sugar epimerase [Desulfovibrio sp. U5L]
gi|385735390|gb|EIG55588.1| nucleoside-diphosphate-sugar epimerase [Desulfovibrio sp. U5L]
Length = 316
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 157/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ LLE ++ LD Y + HLL D F L
Sbjct: 7 VLVTGGAGFLGSHLCER-LLERDCDVICLDNYFTGSKQNVLHLL--------DNPHFELL 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ A+ ++ +++
Sbjct: 58 --RHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRLRAKIM 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG D + P Y +G++ R Y K+ E
Sbjct: 115 QASTSEVYG---------DPSVHPQPESY----------WGNVNTIGFRSCYDEGKRCAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ L + R FN GPRM P++G RV++ F LR +PL +
Sbjct: 156 TLFFDYRRQHNLRIKVARIFNTYGPRMH-------PNDG--RVVSNFIIQALRGEPLTVY 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GQ R+F Y+ D IEA L +++ P G + N GNP E T+ +LA+M+ E
Sbjct: 207 GQGQQTRSFCYVDDLIEAFLRLMDTPDDFTGPV-NTGNP-GEFTILELAQMVIEY----- 259
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S ++ DD +R PD+T+ +L W PK L + L+ T+ Y
Sbjct: 260 --------TGSKSVIDYRPLPQDDPKQRRPDITLAKAKLDWEPKVPLAEGLKKTIEY 308
>gi|118481067|gb|ABK92487.1| unknown [Populus trichocarpa]
Length = 443
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 73/399 (18%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKH 57
+G + L L + ++ I + G GF+GSHL ++++ I+ + + + + H
Sbjct: 108 SGGKIPLGLKSKSLR---IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH 164
Query: 58 LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNF 117
L P + I+HD +E L+ D +LA +P Y P+ TI +N
Sbjct: 165 LKNPRFEL-----------IRHDV-VEPLLLEVDQIYHLACPASPVHYKHNPVKTIKTNV 212
Query: 118 IDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
+ L ++ R + ST EVYG PL Q P + +P
Sbjct: 213 VGTLNMLGLAKRVGARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI---- 257
Query: 178 IEKQRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235
R Y K+ E L Y GA G+E I R FN GPRM G R
Sbjct: 258 --GVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDG---------R 304
Query: 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPH 293
V++ F LR++P+ + G+ R+F ++ D +E ++ ++E H+ FN+GNP
Sbjct: 305 VVSNFVAQALRKEPMTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP- 358
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQL 352
E T+ +LA+++ E T+D +++ EF DD KR PD+T L
Sbjct: 359 GEFTMLELAQVVQE--------------TIDPNARIEFRPNTEDDPHKRKPDITKAKDLL 404
Query: 353 GWNPKTSLWDLLESTLT-YQHRTYAEAIKQAVAKPVASS 390
GW PK SL L ++ ++ R + + ++ +++S
Sbjct: 405 GWEPKISLRQGLPMMVSDFRQRVFGDHKEEGTTSTMSTS 443
>gi|385809985|ref|YP_005846381.1| dTDP-glucose 4,6-dehydratase [Ignavibacterium album JCM 16511]
gi|383802033|gb|AFH49113.1| dTDP-glucose 4,6-dehydratase [Ignavibacterium album JCM 16511]
Length = 315
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 158/369 (42%), Gaps = 67/369 (18%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFH 73
+T + G GF+GSHLC++++ E +++ +D + D I HL G + QF
Sbjct: 2 MTAVVTGGAGFLGSHLCDRLIAEG-FRVICIDNFITGSPDNIAHLF------GNENFQF- 53
Query: 74 RLNIKHD-SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
IKHD + + D ++ A+ +P DY P+ T+ + + E N
Sbjct: 54 ---IKHDVTNFIHVPGKVDFILHFASPASPIDYLKLPIQTLKVGSLGTHKALGLAKEKNA 110
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQ 190
+ ST EVYG DP + ED +G++ R Y AK+
Sbjct: 111 VFLLASTSEVYG---------------DPLIHPQNED----YWGNVNPVGPRGVYDEAKR 151
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E L A +GL+ IVR FN GPRM G RVL F L+ +PL
Sbjct: 152 FAESLTMAYHRYHGLQTRIVRIFNTYGPRMRLNDG---------RVLPTFIGQALKGEPL 202
Query: 251 KLVDGGQSQRTFIYIKDAIEAV--LLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
+ G R+F Y+ D I+ + LL+ E + N+GNP +E+T++Q AE + +
Sbjct: 203 SIFGDGSQTRSFCYVDDLIDGIYRLLLSEEV-----YPVNIGNP-DEITIQQFAEEVLSL 256
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
S + P DD R PD++ Q LGW PK S + ++ TL
Sbjct: 257 TGSRSKISYHPLPE-------------DDPKVRQPDISKAKQLLGWEPKVSRTEGIKRTL 303
Query: 369 TYQHRTYAE 377
Y + E
Sbjct: 304 EYFRKIINE 312
>gi|410464581|ref|ZP_11317998.1| nucleoside-diphosphate-sugar epimerase [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982305|gb|EKO38777.1| nucleoside-diphosphate-sugar epimerase [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 316
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 159/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L + ++ LD Y + HLL D F +
Sbjct: 7 VLVTGGAGFLGSHLCERLLAQGC-DVICLDNYFTGSKQNVAHLL--------DNPNFELM 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ A+ ++ +++
Sbjct: 58 --RHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVATTKTSVHGAINMLGLAKRLRAKIM 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG D + P Y + +P F R Y K+ E L
Sbjct: 115 QASTSEVYG---------DPSVHPQPESYW--GNVNPIGF------RSCYDEGKRCAETL 157
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ L + R FN GPRM P++G RV++ F LR +PL +
Sbjct: 158 FFDYRRQHNLRIKVARIFNTYGPRMH-------PNDG--RVVSNFIIQALRGEPLTVYGQ 208
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
GQ R+F Y+ D +EA L +++ P G + N GNP E T+ +LA+++ E
Sbjct: 209 GQQTRSFCYVDDLVEAFLRLMDTPDDFTGPV-NTGNP-GEFTILELAKLVIEY------- 259
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S ++ DD +R PD+T+ +LGW PK +L + L+ T+ Y
Sbjct: 260 ------TGSKSIIDYRPLPQDDPKQRRPDITLAKAKLGWEPKVALAEGLKKTIEY 308
>gi|219849036|ref|YP_002463469.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM
9485]
gi|219543295|gb|ACL25033.1| NAD-dependent epimerase/dehydratase [Chloroflexus aggregans DSM
9485]
Length = 316
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 153/356 (42%), Gaps = 58/356 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLC++ L E H ++A+D D I HL G R F
Sbjct: 3 ILITGGAGFLGSHLCDRFLAEG-HTVIAMDNLITGSTDNIAHL------AGHPRFLFIHH 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + +EG I D ++ A+ +P DY P+ T+ + + R +
Sbjct: 56 DVTNYIYIEGPI---DAVLHFASPASPIDYLELPIQTLKVGALGTHKALGLARAKGARFL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q +YY P R Y AK+ E +
Sbjct: 113 LASTSEVYGD------PQVHP--QPESYYGHVNPVGP---------RGVYDEAKRFAEAM 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +G+E IVR FN GPRM G RV+ F + LR +PL +
Sbjct: 156 TMAYHTYHGVETRIVRIFNTYGPRMRLRDG---------RVVPNFISQALRGEPLTIYGD 206
Query: 256 GQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E V L+ + N+GNP E T+ + A+++ E+ +G
Sbjct: 207 GSQTRSFQYVSDLVEGVYRLLFSDEVEP----VNIGNP-GEFTIAEFAQIVNEITGNKAG 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
D+ +K DD R PD++ + L W PK SL + LE T+ +
Sbjct: 262 VIYR-----DLRTK-------DDPQVRQPDISKARRILQWEPKVSLREGLELTIPW 305
>gi|428167302|gb|EKX36264.1| hypothetical protein GUITHDRAFT_90059 [Guillardia theta CCMP2712]
Length = 362
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 165/357 (46%), Gaps = 51/357 (14%)
Query: 14 PIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFH 73
P+K + I + G GF+GS+L ++ L+E H++ LD ++ I
Sbjct: 24 PLKRLRILVTGGAGFVGSNLVDR-LMEQGHEVTVLD-------NMFTGSKSNIQHWISHP 75
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
N+ + + + D +LA +P Y P+ TI ++ + + ++ R
Sbjct: 76 NFNLINHDVTDPIHLEVDRIFHLACPASPPHYMYNPIKTIKTSVMGTINMLGLAKRVRAR 135
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
++ ST EVYG P + P Q Y+ P R Y K++ E
Sbjct: 136 ILFTSTSEVYGD------PTEHP--QKETYWGHVNPIGP---------RACYDEGKRVGE 178
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
++YA + G++ + R FN GPRM+ PS+G RV++ F L+ + L +
Sbjct: 179 TMMYAYRDQAGVDVRVARIFNTFGPRMN-------PSDG--RVVSNFIVQALQGRDLTVY 229
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G++ R+F Y+ D + ++ ++E + N+GNP +E T+RQ AE++ ++ +
Sbjct: 230 GDGKATRSFQYVDDLVAGLMALMEG---SYDRPVNIGNP-DEYTIRQFAELIQKLTK--T 283
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ + +P+ DD +R PD+T+ +++L W PKTS+ + L T+ Y
Sbjct: 284 NSSIVHKPSTQ-----------DDPQQRRPDITVASRELAWRPKTSVKEGLRRTIHY 329
>gi|332671104|ref|YP_004454112.1| NAD-dependent epimerase/dehydratase [Cellulomonas fimi ATCC 484]
gi|332340142|gb|AEE46725.1| NAD-dependent epimerase/dehydratase [Cellulomonas fimi ATCC 484]
Length = 333
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 162/365 (44%), Gaps = 62/365 (16%)
Query: 13 RPIKPVTICMI-GAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGA 67
RP +PV ++ G GF+GSHLC LL+ +++ LD + + HLL G
Sbjct: 15 RPRRPVHRAVVTGGAGFLGSHLCTA-LLDRGAEVVCLDSFLTGSPANVAHLL------GR 67
Query: 68 DRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYC 127
R ++ + G + DL ++LA+ +P DY P++T+ I +
Sbjct: 68 PGFHLQRCDLTDFVHVPGPV---DLVLHLASPASPVDYLQLPIETLKVGSIGTAHALGLA 124
Query: 128 SENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYAC 187
+ R + ST EVYG P+ P Q +Y+ P R Y
Sbjct: 125 KDKGARFLLASTSEVYGD------PQVHP--QPESYWGHVNPVGP---------RGVYDE 167
Query: 188 AKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247
AK+ E + A + +G++ IVR FN GPRM P +G R + F L
Sbjct: 168 AKRFAEAITTAYRSTHGVDTAIVRIFNTYGPRMR-------PRDG--RAIPTFVRQALAG 218
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMM 305
+P+ + G+ R+ ++ D +E VL + A+GH N+GNP E+TV ++A+
Sbjct: 219 EPVTVAGTGEQTRSVCFVDDLVEGVLGLA-----ASGHPGPMNIGNP-EEMTVLRIAQ-- 270
Query: 306 TEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
+V A T S+ E G DD + R PD+T+ +LGW P+ + D L
Sbjct: 271 -DVIAA----------TGSSSTVEHVGRPVDDPEVRRPDITLARTELGWEPRVAWADGLR 319
Query: 366 STLTY 370
T+ +
Sbjct: 320 RTVEW 324
>gi|298290574|ref|YP_003692513.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506]
gi|296927085|gb|ADH87894.1| NAD-dependent epimerase/dehydratase [Starkeya novella DSM 506]
Length = 336
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 51/367 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHLC++ L+E ++ LD ++ +H +E G R I+H
Sbjct: 19 VLITGGAGFIGSHLCDR-LIEGGAYVICLDNFSTGRRHNVE--HLVGHPRFSL----IRH 71
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D ++ + D NLA +P Y P+ T ++ + AL ++K +EN R++ ST
Sbjct: 72 DV-IDPIAVDVDQIYNLACPASPTAYAADPVHTTKTSVLGALNLLKLATENGARILQAST 130
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
E+YG P+ SP Q AY+ + P R Y K+ E L +
Sbjct: 131 SEIYGD------PQVSP--QPEAYWGHVDPTGP---------RACYDEGKRCAESLFFDY 173
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
G I R FN GPRM G DG RV + LR + + G
Sbjct: 174 ARRFGTRIKIARIFNTYGPRMR---GDDG------RVTSNLIIEALRGTDMTVYGDGSQT 224
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ + +EA++ ++ P G + N+GNP +E T++ A ++ + S +
Sbjct: 225 RSFCYVDETVEALIRLMATPDGVEGPV-NIGNP-DERTIQDFAGVVQRMTGSSSRISHRP 282
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY--QHRTYAE 377
P DD +R PD++ + LGW P SL L T+ Y +
Sbjct: 283 LPV-------------DDPRRRCPDISEATRLLGWVPTISLEAGLALTIDYFREELVREP 329
Query: 378 AIKQAVA 384
+++AVA
Sbjct: 330 GVREAVA 336
>gi|316931858|ref|YP_004106840.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
DX-1]
gi|315599572|gb|ADU42107.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
DX-1]
Length = 315
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC+K+L E H++L +D Y I+HL+ G R +
Sbjct: 7 ILVSGGAGFIGSHLCDKLLAEG-HEVLCVDNYFTGWRRNIEHLV------GTPRFEV--- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D+ NLA +P Y P+ T+ ++ A+ ++ ++
Sbjct: 57 -MRHDVTFPLYVEVDDI-YNLACPASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG D + P Y +G + R Y K+ E
Sbjct: 115 QASTSEVYG---------DPNVHPQPESY----------WGHVNPLGIRACYDEGKRAAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ ++ + R FN GPRM P++G RV++ F L + +
Sbjct: 156 TLFFDYHRQHKVKIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALSGNDITIY 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D ++ ++ G + N+GNP E T+RQLAEM+ E+ S
Sbjct: 207 GDGSQTRSFCYVTDLLDGFARLMATGDEFIGPV-NLGNP-VEFTIRQLAEMVIEMTGSKS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ P+ DD +R PD+++ ++LGW PK L D L+ T+ Y
Sbjct: 265 KLVMMPLPS-------------DDPRQRQPDISLARRELGWEPKVPLADGLKETIGY 308
>gi|156744183|ref|YP_001434312.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM
13941]
gi|156235511|gb|ABU60294.1| NAD-dependent epimerase/dehydratase [Roseiflexus castenholzii DSM
13941]
Length = 317
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 151/356 (42%), Gaps = 58/356 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLC++ L E H ++A+D D I HL G R F +
Sbjct: 3 VLITGGAGFLGSHLCDRFLAEG-HTVVAMDNLITGNTDNIAHL------AGHPRFSFIKH 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + +EG + D ++ A+ +P DY P+ T+ + + + R +
Sbjct: 56 DVTNYIFVEGPL---DAILHFASPASPVDYLELPIQTLKVGALGTHKALGLAKDKKARFL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q YY P R Y AK+ E +
Sbjct: 113 LASTSEVYGD------PQVHP--QPETYYGHVNPIGP---------RGVYDEAKRFAEAM 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +G+E IVR FN GPRM G RV+ F LR +PL +
Sbjct: 156 TMAYHRYHGVETRIVRIFNTYGPRMRLRDG---------RVVPNFIQQALRGEPLTIYGD 206
Query: 256 GQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E V L+ N N+GNP E T++ AE++
Sbjct: 207 GSQTRSFQYVDDLVEGVYRLLFSNEVEP----VNIGNP-GEFTIKAFAELVN-------- 253
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
AL + V K+ + DD R PD+ + LGW P+ SL + L T+ +
Sbjct: 254 --ALTDNKAGVVYKDLRTQ--DDPQVRQPDIAKARRILGWEPRVSLEEGLRRTIPW 305
>gi|49480122|ref|YP_034772.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|49331678|gb|AAT62324.1| UDP-glucose 4-epimerase (NAD-dependent epimerase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 321
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 165/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + + + K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVGRGYNVTIVDNFHKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGEQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTDSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + K + D L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLVQFQAKVTWEDGLKETIKW 314
>gi|194364288|ref|YP_002026898.1| NAD-dependent epimerase/dehydratase [Stenotrophomonas maltophilia
R551-3]
gi|194347092|gb|ACF50215.1| NAD-dependent epimerase/dehydratase [Stenotrophomonas maltophilia
R551-3]
Length = 318
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 162/358 (45%), Gaps = 50/358 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GF+GSHLC++ L+ H +L +D + K + G R + R ++
Sbjct: 10 VLVTGGAGFLGSHLCDR-LIAAGHDVLCVDNFYTGSK--ANVDGLLGHPRFELMRHDVTF 66
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+E D NLA +P Y P+ T ++ A+ ++ R++ ST
Sbjct: 67 PLYVE-----VDRIFNLACPASPIHYQQDPVQTTKTSVHGAINMLGLAKRLRARILQAST 121
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P+ P Q Y+ +P R Y K+ E L +
Sbjct: 122 SEVYGD------PEIHP--QVEGYW---GRVNPIGI------RSCYDEGKRCAETLFFDY 164
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++ LE ++R FN GPRM P++G RV++ F L+ P+ + G
Sbjct: 165 WRQHQLEIKVMRIFNTYGPRMH-------PNDG--RVVSNFIVQALKGDPITIYGDGSQT 215
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D IE +L ++++PA G I N+GNP E T+ +LAE + + V G + +E
Sbjct: 216 RSFCYVDDLIEGMLRLMDSPADLTGPI-NIGNP-AEYTMLELAETVLRL---VGGSSKIE 270
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY-QHRTYA 376
+ DD +R PD+++ LGW P+ L D L+ T+ Y +HR A
Sbjct: 271 YRPLPS----------DDPRQRQPDISLARADLGWEPRVGLEDGLKETIAYFRHRLQA 318
>gi|357454141|ref|XP_003597351.1| UDP-glucuronic acid decarboxylase [Medicago truncatula]
gi|217074092|gb|ACJ85406.1| unknown [Medicago truncatula]
gi|355486399|gb|AES67602.1| UDP-glucuronic acid decarboxylase [Medicago truncatula]
Length = 351
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 154/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++++ ++++ D Y K L+ G R + I+H
Sbjct: 40 ILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLK--KWIGHPRFEL----IRH 93
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 94 DV-TETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 152
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG D + P Y +G++ R Y K++ E L++
Sbjct: 153 SEVYG---------DPLIHPQPETY----------WGNVNPIGVRSCYDEGKRVAETLMF 193
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++GLE I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 194 DYHRQHGLEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRGEPLTVQLPGT 244
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E
Sbjct: 245 QTRSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMTELAENVKE---------- 290
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V++ E DD +R PD+T + LGW PK L D L
Sbjct: 291 LINPAVEIKMVE---NTPDDPRQRKPDITKATELLGWEPKVKLRDGL 334
>gi|403509229|ref|YP_006640867.1| short chain dehydrogenase family protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402798695|gb|AFR06105.1| short chain dehydrogenase family protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 327
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 156/351 (44%), Gaps = 37/351 (10%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
+ G GFIGSHL + ++ + ++ D+ + +L S ++F + +I
Sbjct: 4 VITGGAGFIGSHLSDHLIAQGHEVVVIDDLSTGSLDNLSRIRSSPA---LRFVQGDILDR 60
Query: 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140
++ L++ AD +LAA PL ++ +N VV+ + + ST
Sbjct: 61 DLVDSLVEGADAVYHLAAAVGVHTIVDNPLRSLRTNLHGTENVVEAAVRHRVPYMVASTS 120
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
EVYGK L + I+GS K RWSYA AK L E + Y G
Sbjct: 121 EVYGKNDADGLTEHDDR----------------IYGSPLKSRWSYAAAKGLDELVAYVHG 164
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
E+ + I R FN +GPR G+ VPR F + + +P+ + G +R
Sbjct: 165 TESDVPCVITRFFNVVGPRQTGRYGMV-----VPR----FVDQAVSGEPITVYGTGTQRR 215
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
F + D + + ++E P A N+G H E++++ LA+ + E+ E
Sbjct: 216 CFGSVFDVVPTLPRLLETP-EAYHQAVNLGG-HEEISIKGLADRVVELTGS-------ES 266
Query: 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
+ +E YGEGY+D +R PD ++ + +G+ P L +++S + Y+
Sbjct: 267 EITYMDYEEAYGEGYEDMQRRYPDTSLARRLIGYEPTRDLNAIIDSIIEYR 317
>gi|239908454|ref|YP_002955196.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio
magneticus RS-1]
gi|239798321|dbj|BAH77310.1| NAD-dependent epimerase/dehydratase family protein [Desulfovibrio
magneticus RS-1]
Length = 316
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 159/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE++L + ++ LD Y + HLL D F +
Sbjct: 7 VLVTGGAGFLGSHLCERLLAQG-CDVICLDNYFTGSKQNVAHLL--------DNPNFELM 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ A+ ++ +++
Sbjct: 58 --RHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVATTKTSVHGAINMLGLAKRLRAKIM 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG D + P Y + +P F R Y K+ E L
Sbjct: 115 QASTSEVYG---------DPSVHPQPESYW--GNVNPIGF------RSCYDEGKRCAETL 157
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ L + R FN GPRM P++G RV++ F LR +PL +
Sbjct: 158 FFDYRRQHNLRIKVARIFNTYGPRMH-------PNDG--RVVSNFIIQALRGEPLTVYGQ 208
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
GQ R+F Y+ D +EA L +++ P G + N GNP E T+ +LA+++ E
Sbjct: 209 GQQTRSFCYVDDLVEAFLRLMDTPDDFTGPV-NTGNP-GEFTILELAKLVIEY------- 259
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S ++ DD +R PD+T+ +LGW PK +L + L+ T+ Y
Sbjct: 260 ------TGSKSIIDYRPLPQDDPKQRRPDITLAKAKLGWEPKVALPEGLKKTIEY 308
>gi|406965382|gb|EKD91016.1| hypothetical protein ACD_30C00052G0034 [uncultured bacterium]
Length = 315
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 165/363 (45%), Gaps = 61/363 (16%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFH 73
+ I + G GF+GSHLC++ L+ + H+++ALD + + I HLL D F
Sbjct: 1 MKIVVTGGAGFLGSHLCDR-LINSGHEVVALDNLSTGSKENIMHLL--------DNPNFE 51
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPAD-----YNTRPLDTIYSNFIDALPVVKYCS 128
+ I +L +K A + +LA+ +P + Y+ +T+ N + + +
Sbjct: 52 FIQIDLSEKLPEDLKAAQI-YHLASPASPNEDSPKSYHKLAFETMQVNTLGTWNMCELAQ 110
Query: 129 ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACA 188
+ +++ ST E+YG+ P + P Q +Y P R Y +
Sbjct: 111 KLGAKILFTSTSEIYGE------PLEHP--QKESYRGNVSTTGP---------RSVYDES 153
Query: 189 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
K+ E ++ A ++ IVR FN GPRMD G RV+ F LR +
Sbjct: 154 KRFGETIVAAFERSKDVDGRIVRIFNTYGPRMDEDDG---------RVVVEFITAALRNE 204
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
P + G+ R+F Y+ D IE ++L + N G + N+GNP +E T+++LA+ + E+
Sbjct: 205 PFPVFGDGEQTRSFCYVSDLIEGLVLAM-NTENTRGEVINLGNP-DEYTIKELAQKIKEL 262
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEG-YDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
T S F GE DD +R PD++ + LGW PK + + LE T
Sbjct: 263 -------------TESESEMVFEGERPEDDPSQRCPDISKAKELLGWEPKIPIDEGLEET 309
Query: 368 LTY 370
+ Y
Sbjct: 310 IKY 312
>gi|402851110|ref|ZP_10899286.1| dTDP-glucose 4,6-dehydratase [Rhodovulum sp. PH10]
gi|402498640|gb|EJW10376.1| dTDP-glucose 4,6-dehydratase [Rhodovulum sp. PH10]
Length = 354
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 159/359 (44%), Gaps = 55/359 (15%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQ 71
K + I + G GFIGSHLC++ L++ H+I+ +D + D ++ L + T
Sbjct: 5 KKLDIVITGGAGFIGSHLCDR-LVQKGHRIVCIDNLDTGRIDNVRPLANHRNFT------ 57
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
F +++ ++G + D NLA +P Y P+ TI + + A V++
Sbjct: 58 FVEGDVREPLSIDGPV---DRIYNLACPASPPHYQRDPIGTIRTCVLGAQHVLELARATG 114
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R++ ST EVYG P+ P Q +Y P R Y K+
Sbjct: 115 ARVLQASTSEVYGD------PEMHP--QAESYRGAVNPIGP---------RACYDEGKRC 157
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E + + +G+ + R FN GPRM E RV++ F LR QP+
Sbjct: 158 AEAMFFDYHRVHGVAIKVARIFNTYGPRM---------LENDGRVISNFVVQALRDQPIT 208
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
L G R+F Y+ D ++ + L++E+ G + N+GNP E++V+++A M V A+
Sbjct: 209 LYGDGTQTRSFCYVADLLDGLELLMESDPAVTGPV-NLGNPR-EISVKEIAAM---VVAQ 263
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ L F DD +R PD+ + LGW P+ +L D L T+ Y
Sbjct: 264 TRSRSTL----------AFAPLPQDDPRRRRPDVATAARLLGWQPRITLEDGLRPTIDY 312
>gi|345303662|ref|YP_004825564.1| UDP-glucuronate decarboxylase [Rhodothermus marinus SG0.5JP17-172]
gi|345112895|gb|AEN73727.1| UDP-glucuronate decarboxylase [Rhodothermus marinus SG0.5JP17-172]
Length = 318
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 154/363 (42%), Gaps = 65/363 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQ 71
+P + G GFIGSHLCE+ L E H+++ +D + D I HL+ G +R
Sbjct: 3 RPPRTLITGGAGFIGSHLCERFLAEG-HEVICMDNFITGSPDNIAHLI------GHERFH 55
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
F ++ + +EG + D ++ A+ +PADY P+ T+ + +
Sbjct: 56 FIHHDVTNFIYVEGPL---DYVLHFASPASPADYLKYPIQTLKVGALGTHKALGLAKAKG 112
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAK 189
R + ST EVYG DP + ED +G++ R Y AK
Sbjct: 113 ARFLLASTSEVYG---------------DPLVHPQPED----YWGNVNPVGLRGVYDEAK 153
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
+ E + A +G++ IVR FN GPRM G R L F L+ +P
Sbjct: 154 RFAEAMTMAYHRYHGVDVRIVRIFNTYGPRMRLDDG---------RALPTFMTQALKGEP 204
Query: 250 LKLVDGGQSQRTFIYIKDAIEAV--LLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE 307
+ + G R+F YI D +E + LLM + N +GNP E+++ + A+ + E
Sbjct: 205 ITVYGDGSQTRSFQYIDDLVEGIYRLLMSDYVGPVN-----IGNP-EEISILEFAKEIIE 258
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+ S P DD R PD+++ + LGW PK S + L T
Sbjct: 259 LTGSKSEIVFKPLPA-------------DDPKVRQPDISLARRVLGWEPKVSRREGLRRT 305
Query: 368 LTY 370
L Y
Sbjct: 306 LEY 308
>gi|423607733|ref|ZP_17583626.1| hypothetical protein IIK_04314 [Bacillus cereus VD102]
gi|401239930|gb|EJR46338.1| hypothetical protein IIK_04314 [Bacillus cereus VD102]
Length = 321
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 162/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYDVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F LR + + + G+
Sbjct: 163 ALE-GLSVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALRGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++A ++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAAVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|356535177|ref|XP_003536125.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]
Length = 427
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 169/375 (45%), Gaps = 66/375 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL ++++ I+ + + + ++++ G R +
Sbjct: 108 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---HFGNPRFEL--- 161
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E L+ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 162 -IRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 219
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DP + KE +G++ R Y K+ E
Sbjct: 220 LTSTSEVYG---------------DPLQHPQKE----TYWGNVNPIGVRSCYDEGKRTAE 260
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F LR++PL
Sbjct: 261 TLTMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRKEPLT 309
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++ E
Sbjct: 310 VYGDGKQTRSFQYVSDLVEGLIRLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQE-- 361
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
T+D ++ E+ DD KR PD++ QLGW PK L L +
Sbjct: 362 ------------TIDPDARIEYRPNTEDDPHKRKPDISRAKDQLGWEPKVDLRKGLPLMV 409
Query: 369 T-YQHRTYAEAIKQA 382
+ ++ R + + ++A
Sbjct: 410 SDFRQRIFGDQKEKA 424
>gi|423514216|ref|ZP_17490732.1| hypothetical protein IG3_05698 [Bacillus cereus HuA2-1]
gi|402442899|gb|EJV74816.1| hypothetical protein IG3_05698 [Bacillus cereus HuA2-1]
Length = 321
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 161/352 (45%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKNKYHEELMKE-----ISVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
S + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KSSIHELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +R +AE + ++ +S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKNIRVVAEDIKKLTKSIS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVHVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|148657680|ref|YP_001277885.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1]
gi|148569790|gb|ABQ91935.1| NAD-dependent epimerase/dehydratase [Roseiflexus sp. RS-1]
Length = 317
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 153/356 (42%), Gaps = 58/356 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLC++ L E H ++A+D D I HL G R F +
Sbjct: 3 ILITGGAGFLGSHLCDRFLAEG-HTVVAMDNLITGSTDNIAHL------AGHPRFSFIKH 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + +EG + D ++ A+ +P DY P+ T+ + + + R +
Sbjct: 56 DVTNYIFVEGPL---DAILHFASPASPVDYLELPIQTLKVGALGTHKALGLAKDKKARFL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q +YY P R Y AK+ E +
Sbjct: 113 LASTSEVYGD------PQIHP--QPESYYGHVNPIGP---------RGVYDEAKRFAEAM 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +G+E IVR FN GPRM G RV+ F LR +PL +
Sbjct: 156 TMAYHRYHGVETRIVRIFNTYGPRMRLRDG---------RVVPNFIQQALRGEPLTIYGD 206
Query: 256 GQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E V L+ + N+GNP E T++ AE++ + +G
Sbjct: 207 GSQTRSFQYVDDLVEGVYRLLFSDEVEP----VNIGNP-GEFTIKAFAELVNTLTGNTAG 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V K+ + DD R PD++ + LGW P+ SL + L T+ +
Sbjct: 262 ----------VVYKDLRTQ--DDPQVRQPDISKARRILGWEPQISLEEGLRRTIPW 305
>gi|424889262|ref|ZP_18312865.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174811|gb|EJC74855.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 340
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 165/378 (43%), Gaps = 59/378 (15%)
Query: 9 DLDGRPIKP--VTICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPE 62
++ G+P+ T+ + G GF+GSHLCE+ LL+ +++ LD ++ + HL
Sbjct: 12 EVSGKPVPQGLRTVLVNGGAGFLGSHLCER-LLQRGDRVICLDNFSTGRRVNVDHL---- 66
Query: 63 SQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALP 122
A +FH ++HD R I+ A L N A+ +P DY P+ T+ +N + A+
Sbjct: 67 ----ASNARFHL--VEHDVRQPFDIE-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVN 119
Query: 123 VVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQR 182
+ + ++ ST EVYG P SP Q +Y P R
Sbjct: 120 TLDCACKTAAVVVQSSTSEVYGD------PNQSP--QPESYCGNVNPIGP---------R 162
Query: 183 WSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 242
Y K+ E L + G++ + R FN GPRM G RV++ F
Sbjct: 163 ACYDEGKRSAETLFFDYHRTYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIV 213
Query: 243 NLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLA 302
LR L + G R+F Y+ D +E L + +G I N+GNP E+TVR+LA
Sbjct: 214 QALRNADLTIYGDGHQTRSFCYVDDLVEGFLRFSAAGSACHGPI-NLGNPA-EITVRRLA 271
Query: 303 EMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD 362
E++ ++ S L P V DD +R PD++ +LGW P+ L
Sbjct: 272 EIVRDLTNSRSRIVHL--PAV-----------IDDPRQRRPDISRAMAELGWQPRIGLEA 318
Query: 363 LLESTLTYQHRTYAEAIK 380
L T+ Y A A K
Sbjct: 319 GLARTVGYFDSLLAGAEK 336
>gi|297563631|ref|YP_003682605.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848079|gb|ADH70099.1| NAD-dependent epimerase/dehydratase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 327
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 162/351 (46%), Gaps = 45/351 (12%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
+ G GF+GSHL ++ LL +++ D + P +++ R ++
Sbjct: 5 VVTGGNGFVGSHLVDR-LLARGDEVVVFDTRGAR------PAPAPSWKEVEYVRGSVSSS 57
Query: 81 SRLEGLIKMA-DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+L I+ D+ +LAA+ Y P++ I NF V+ +++ ST
Sbjct: 58 EQLAKAIRGGVDVVYHLAAVVGVDRYLESPMEVIDVNFTGTRNVLDLAERAGAKVVFAST 117
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EV+GK D P ++D + + G+ RWSY+ +K L E L +
Sbjct: 118 SEVFGKN------PDVPWKED----------ADRVLGTTSASRWSYSSSKALAEHLTFGY 161
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
GL +IVR FN GPR P+ V R L + LR +P + D G
Sbjct: 162 MG-RGLNASIVRYFNLYGPRQR-------PAFLVSRSL----HRALRGEPPVVYDEGGQT 209
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F YI DA+EA + + P A+G FNVG+ +EVT+R+ +++ E+ G+
Sbjct: 210 RSFTYIDDAVEATVQIGTRP-EADGECFNVGS-SDEVTIREAVDLIVEL---TGGKVV-- 262
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
PT + +++ +G Y D D+RIPD I LGW TSL + + T+ +
Sbjct: 263 -PT-SIDTRDRFGHSYQDLDRRIPDAGKIRSLLGWKSTTSLREGVARTIEW 311
>gi|423526037|ref|ZP_17502489.1| hypothetical protein IGC_05399 [Bacillus cereus HuA4-10]
gi|401164863|gb|EJQ72195.1| hypothetical protein IGC_05399 [Bacillus cereus HuA4-10]
Length = 321
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 160/354 (45%), Gaps = 44/354 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y +K K+ I +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKEKNKY-----HNKLIKEIPVSPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
++ L+ D+ +LAAI + ++ I +NF +++ K+++ ST
Sbjct: 60 KKAIDELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQAALNGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +R +AE + ++ VS
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KLNGEIINIGS-ENEKNIRVVAEDIKKLTKSVS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
V V +E Y G+++ R PD+T + + + + K + L+ T+ + H
Sbjct: 265 --KIVHVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETMKWFH 316
>gi|170698733|ref|ZP_02889798.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria
IOP40-10]
gi|170136358|gb|EDT04621.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria
IOP40-10]
Length = 313
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 159/356 (44%), Gaps = 58/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
++ + G GF+GSHLCE+ L+ + ++ +D ++ I+HL+ ++ F
Sbjct: 5 SVLVTGGAGFLGSHLCER-LVHAGYDVMCVDNFHTGSKRNIEHLI--------GQVNFE- 54
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD L L AD N+A +P Y + P+ T+ + + A+ ++ R+
Sbjct: 55 -VIRHDVWLP-LYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRCGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG +Q P + +P R Y K+ E
Sbjct: 113 LQASTSEVYGDA-----------QQHPQQESYWGNVNP------NGLRACYDEGKRCAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++G++ +VR FN GPRM G RV++ F LR +P+ L
Sbjct: 156 LFFDYHRQHGVDIRVVRIFNTYGPRMRADDG---------RVVSNFIMQALRGEPITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E +L M++ N+GNP +E+T+R+LAE + +
Sbjct: 207 DGSQTRSFCYVDDLVEGLLRMMDQDDDTG--PINLGNP-SEITIRELAECVLRL------ 257
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S E+ DD +R PD+ Q+L W P +L D L+ T+ +
Sbjct: 258 -------TGSKSRIEYRPLPADDPLQRRPDIGRARQRLDWQPGIALEDGLKETIAH 306
>gi|423578839|ref|ZP_17554950.1| hypothetical protein IIA_00354 [Bacillus cereus VD014]
gi|423638489|ref|ZP_17614141.1| hypothetical protein IK7_04897 [Bacillus cereus VD156]
gi|401219770|gb|EJR26421.1| hypothetical protein IIA_00354 [Bacillus cereus VD014]
gi|401270805|gb|EJR76824.1| hypothetical protein IK7_04897 [Bacillus cereus VD156]
Length = 321
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKNKYHKELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGEQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTKSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+ + + + + + + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVAKLRELVQFQAEVTWEEGLKETIKW 314
>gi|354603101|ref|ZP_09021101.1| hypothetical protein HMPREF9450_00016 [Alistipes indistinctus YIT
12060]
gi|353349258|gb|EHB93523.1| hypothetical protein HMPREF9450_00016 [Alistipes indistinctus YIT
12060]
Length = 313
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 162/362 (44%), Gaps = 62/362 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLCE++L E H ++ +D Y + I+HLLE + H
Sbjct: 4 ILVTGGAGFIGSHLCERLLSEG-HDVICMDNYFTGSKNNIRHLLEND----------HFE 52
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +E D NLA +P Y P+ T+ ++ + A+ ++ +++
Sbjct: 53 LVRHDI-IEPYHAEVDEIYNLACPASPVHYQYNPIKTLKTSVMGAINMLGLAKRTKAKIL 111
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + E +G++ R Y K+ E
Sbjct: 112 QASTSEVYG---------------DPFVHPQVE----TYWGNVNPIGLRSCYDEGKRCAE 152
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
+NG+ I+R FN GPRM+ P++G RV++ F LR + + +
Sbjct: 153 TFFMDYHRQNGVRIKIIRIFNTYGPRMN-------PNDG--RVVSNFIVQALRGENITIY 203
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IEA++ M++ G + N GNP +E T+ +LAE + ++ S
Sbjct: 204 GDGTQTRSFQYVDDLIEAMIRMMDTEDDFTGPV-NTGNP-DEFTMLELAEKVIQMTGSKS 261
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL-GWNPKTSLWDLLESTLTYQH 372
P+ DD +R P++ + Q+L GW+P L L+ T+ Y
Sbjct: 262 KITFEPLPS-------------DDPKQRKPNIALATQRLGGWSPSVGLERGLQKTIEYFK 308
Query: 373 RT 374
T
Sbjct: 309 ET 310
>gi|322419459|ref|YP_004198682.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
gi|320125846|gb|ADW13406.1| NAD-dependent epimerase/dehydratase [Geobacter sp. M18]
Length = 311
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 159/359 (44%), Gaps = 66/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLCE++L E H ++ LD + I HLL D F
Sbjct: 3 ILVTGGAGFIGSHLCERLLKEG-HDVICLDNFFTGNKRNIAHLL--------DHRDFEL- 52
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD E ++ D NLA +P Y P+ T ++ + A+ ++ R++
Sbjct: 53 -IRHDV-TEPILLEVDRIYNLACPASPIHYQYNPVKTTKTSVMGAINMLGIAKRVRARIL 110
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG P+ P Q AY+ G++ R Y K++ E
Sbjct: 111 QASTSEVYGD------PQVHP--QTEAYW-----------GNVNTLGLRSCYDEGKRVAE 151
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L+ +N ++ I+R FN GP+M +E RV++ F L+ + + +
Sbjct: 152 TLMMDYHRQNNVDIRIIRIFNTYGPKM---------AENDGRVVSNFILQALKGEDITVY 202
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAK 311
G+ R+F ++ D +E ++ M+E P G I N+GNP E T+ + A + +
Sbjct: 203 GEGEQTRSFCFVSDLVEGMVRMMETP----GFIGPVNLGNP-TETTILEFARKIIALTGS 257
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S P DD +R PD+++ Q LGW PK S+ D L+ T+ Y
Sbjct: 258 TSRIVYRPLPA-------------DDPKQRQPDISLAKQMLGWEPKVSVDDGLKQTIDY 303
>gi|153011732|ref|YP_001372946.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC
49188]
gi|151563620|gb|ABS17117.1| NAD-dependent epimerase/dehydratase [Ochrobactrum anthropi ATCC
49188]
Length = 336
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 158/358 (44%), Gaps = 59/358 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE++L E I + ++++L + D F ++H
Sbjct: 20 ILVAGGAGFLGSHLCERLLNEGNFVICVDNFSTGRLENL---RNLLRYDTFSF----VRH 72
Query: 80 DSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
D ++ DL + NLA +P Y P+ T+ ++ I +L +++ + R+
Sbjct: 73 D-----IVNPIDLPVDEIYNLACPASPPHYQADPVHTMKTSVIGSLNLLELAAHYQARIF 127
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q AY+ P R Y K+ E L
Sbjct: 128 QASTSEVYGD------PQTHP--QPEAYWGNVNSFGP---------RSCYDEGKRSAETL 170
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
Y + G++ IVR FN GPRM P +G RV++ F L R+ + +
Sbjct: 171 FYDFHKQYGVDIRIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALEREDITIYGD 221
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D IE ++ + + N+GNP E TVR+LAE + + S
Sbjct: 222 GSQTRSFCYVDDLIEGFSRLMSSQVQKP---VNLGNP-GEFTVRELAEQIIALTNSSSRI 277
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
PT DD +R PD+ + ++LGW P+ +L + L+ T+ Y R
Sbjct: 278 VYRPLPT-------------DDPRQRRPDIMLAKRELGWEPQIALVEGLKQTIAYFER 322
>gi|423644748|ref|ZP_17620364.1| hypothetical protein IK9_04691 [Bacillus cereus VD166]
gi|401269364|gb|EJR75397.1| hypothetical protein IK9_04691 [Bacillus cereus VD166]
Length = 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 163/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKNKYHKELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF V++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNVLQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++A ++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAGVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKELVQFQAKVTWENGLKETIKW 314
>gi|423646570|ref|ZP_17622140.1| hypothetical protein IKA_00357 [Bacillus cereus VD169]
gi|401287262|gb|EJR93063.1| hypothetical protein IKA_00357 [Bacillus cereus VD169]
Length = 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 163/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELMRRGYEVTVVDNFYKGKNKYHKELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF V++ + K+++ ST
Sbjct: 60 KNSIYELVDQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNVLQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++A ++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAGVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKELVQFQAKVTWENGLKETIKW 314
>gi|423404852|ref|ZP_17382025.1| hypothetical protein ICW_05250 [Bacillus cereus BAG2X1-2]
gi|423479689|ref|ZP_17456403.1| hypothetical protein IEO_05146 [Bacillus cereus BAG6X1-1]
gi|401646158|gb|EJS63790.1| hypothetical protein ICW_05250 [Bacillus cereus BAG2X1-2]
gi|402424915|gb|EJV57077.1| hypothetical protein IEO_05146 [Bacillus cereus BAG6X1-1]
Length = 321
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 165/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGNEVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKA-------NPPFSEE----------GDRLYGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTKSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLKELVQFQATVTWEQGLKETIKW 314
>gi|334184973|ref|NP_001189772.1| UDP-xylose synthase 4 [Arabidopsis thaliana]
gi|227204121|dbj|BAH56912.1| AT2G47650 [Arabidopsis thaliana]
gi|330255778|gb|AEC10872.1| UDP-xylose synthase 4 [Arabidopsis thaliana]
Length = 449
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 167/367 (45%), Gaps = 64/367 (17%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP 61
AG + L L + ++ + + G GF+GSHL ++++ + I+ + + + ++++
Sbjct: 108 AGGKIPLGLKRKVLR---VVVTGGAGFVGSHLVDRLMARGDNVIVVDNFFTGRKENVMH- 163
Query: 62 ESQTGADRIQFHRLN---IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFI 118
F+ N I+HD +E ++ D +LA +P Y P+ TI +N +
Sbjct: 164 ---------HFNNPNFEMIRHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVV 213
Query: 119 DALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSI 178
L ++ R + ST EVYG PL Q P + +P
Sbjct: 214 GTLNMLGLAKRVGARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI----- 257
Query: 179 EKQRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236
R Y K+ E L Y GA +E I R FN GPRM G RV
Sbjct: 258 -GVRSCYDEGKRTAETLTMDYHRGAN--VEVRIARIFNTYGPRMCIDDG---------RV 305
Query: 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHN 294
++ F LR++PL + G+ R+F ++ D +E ++ ++E H+ FN+GNP
Sbjct: 306 VSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-G 359
Query: 295 EVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLG 353
E T+ +LA+ M GE ++E T+D ++K EF DD KR PD+T + LG
Sbjct: 360 EFTMLELAKWMV-------GEQVVQE-TIDPNAKIEFRPNTEDDPHKRKPDITKAKELLG 411
Query: 354 WNPKTSL 360
W PK +L
Sbjct: 412 WEPKVAL 418
>gi|384261409|ref|YP_005416595.1| DTDP-glucose 4,6 dehydratase [Rhodospirillum photometricum DSM 122]
gi|378402509|emb|CCG07625.1| DTDP-glucose 4,6 dehydratase [Rhodospirillum photometricum DSM 122]
Length = 317
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 155/357 (43%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLC+++L E ++L +D Y I HLL S
Sbjct: 10 VMVTGGAGFLGSHLCDRLLREGC-EVLCVDNYYTGSRQNITHLLNSPSFEA--------- 59
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +++ D NLA +P Y P+ T ++ A+ ++ R+
Sbjct: 60 -IRHDVTFPLYVEV-DEIYNLACPASPIHYQRDPVQTTKTSVHGAINMLGLAKRLGVRIF 117
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + E +G++ R Y K+ E
Sbjct: 118 QASTSEVYG---------------DPAIHPQPE----TYWGNVNPIGPRSCYDEGKRCAE 158
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++GL + R FN GPRM P++G RV++ F LR +P+ +
Sbjct: 159 TLFFDYHRQHGLSIKVARIFNTYGPRMH-------PNDG--RVVSNFIMQALRGEPITIY 209
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GQ R+F Y+ D IE L +E+ A G + N+GNP E T+ +LAE + +
Sbjct: 210 GEGQQTRSFCYVDDLIEGFLRFMESEAAHTGPL-NLGNP-GEFTILELAETVLRL----- 262
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S EF DD +R PD++ L W P SL + L+ T+ Y
Sbjct: 263 --------TRSSSRLEFKPLPQDDPRQRQPDISHARALLNWTPTLSLEEGLDRTIAY 311
>gi|374577024|ref|ZP_09650120.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM471]
gi|374425345|gb|EHR04878.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. WSM471]
Length = 355
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 161/356 (45%), Gaps = 55/356 (15%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALD-VYN---DKIKHLLEPESQTGADRIQFHR 74
T+ + G GFIGSHLC+ LL+ H ++ LD ++ D I+ LL + +F
Sbjct: 15 TVLVAGGAGFIGSHLCDA-LLQHGHTVICLDNLFTGTIDNIRPLLNHPN------FRFIE 67
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+++ + +EG I D +LA +P Y P+ T+ + + + +++ R+
Sbjct: 68 HDVRDPAEIEGDI---DRIYSLACPASPRHYQKDPVGTMKTCVLGTINMLELAQRKGARV 124
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG D + P Y+ + +P R Y K+ E
Sbjct: 125 LQASTSEVYG---------DPEVHPQPETYL--GNVNPI------GPRACYDEGKRAAET 167
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L++ G+E + R FN GPRM E RV++ F LR +P+ +
Sbjct: 168 LMFDYHRMYGVEIKVARIFNTYGPRM---------LENDGRVVSNFIVQALRGEPITIYG 218
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GG R+F ++ D + + L++E+P+ G N+GNPH EVT+ +A +V A
Sbjct: 219 GGTQTRSFCFVDDLVRGLQLLMESPSSITGPC-NLGNPH-EVTIEAIAR---DVLAY--- 270
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T +S F DD +R P + + LGW P+ +L D L +T+ Y
Sbjct: 271 -------TDSISPLRFEELPKDDPKRRKPVIDTAVRALGWRPRVALKDGLRATIAY 319
>gi|333998075|ref|YP_004530687.1| UDP-glucuronic acid decarboxylase [Treponema primitia ZAS-2]
gi|333740840|gb|AEF86330.1| UDP-glucuronic acid decarboxylase 1 (UDP-glucuronatedecarboxylase
1) (UGD) (UXS-1) [Treponema primitia ZAS-2]
Length = 320
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 161/355 (45%), Gaps = 61/355 (17%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GSHLC + L++ + ++ LD + I HL+ D F +
Sbjct: 15 VTGGAGFLGSHLCNR-LIKDKNDVICLDNFFTGQKRNIAHLI--------DNPYFEL--V 63
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD I++ D NLA +P Y P+ T ++ A+ ++ R++
Sbjct: 64 RHDVTFPYYIEV-DKIFNLACPASPPHYQYDPVQTTKTSVHGAINMLGLAKRTRARILQA 122
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERL 195
ST EVYG DPA + E +G++ R Y K+ E L
Sbjct: 123 STSEVYG---------------DPAVHPQVE----SYWGNVNPIGLRSCYDEGKRCAETL 163
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ +E ++R FN GP M P++G RV++ F L+ + + +
Sbjct: 164 FFDYYRQHKVEIKVIRIFNTYGPNMH-------PNDG--RVVSNFIMQALQNEDISIYGD 214
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
GQ R+F Y+ D I+A++LM+ +P G + N+GNP E T+ +LAE + + S
Sbjct: 215 GQQTRSFCYVDDLIDAMVLMMNSPTDFTGPV-NIGNP-GEFTMLELAEKIILLTGSSSKI 272
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P+ DD +R PD+T+ +Q+L W PK SL D L+ T+ Y
Sbjct: 273 IYKPLPS-------------DDPKQRKPDITLADQKLHWKPKVSLEDGLKETIAY 314
>gi|60932254|gb|AAX37335.1| UDP-glucuronic acid decarboxylase 2 [Populus tomentosa]
Length = 443
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 174/399 (43%), Gaps = 73/399 (18%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKH 57
+G + L L + ++ I + G GF+GSHL ++++ I+ + + + + H
Sbjct: 108 SGGKIPLGLKSKSLR---IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHH 164
Query: 58 LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNF 117
P + I+HD +E L+ D +LA +P Y P+ TI +N
Sbjct: 165 FKNPRFEL-----------IRHDV-VEPLLLEVDQIYHLACPASPVHYKHNPVKTIKTNV 212
Query: 118 IDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
+ L ++ R + ST EVYG PL Q P + +P
Sbjct: 213 VGTLNMLGLAKRVGARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI---- 257
Query: 178 IEKQRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235
R Y K+ E L Y GA G+E I R FN GPRM G R
Sbjct: 258 --GVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDG---------R 304
Query: 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPH 293
V++ F LR++P+ + G+ R+F ++ D +E ++ ++E H+ FN+GNP
Sbjct: 305 VVSNFVAQALRKEPMTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP- 358
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQL 352
E T+ +LA+++ E T+D +++ EF DD KR PD+T L
Sbjct: 359 GEFTMLELAQVVQE--------------TIDPNARIEFRPNTEDDPHKRKPDITKAKDLL 404
Query: 353 GWNPKTSLWDLLESTLT-YQHRTYAEAIKQAVAKPVASS 390
GW PK SL L ++ ++ R + + ++ +++S
Sbjct: 405 GWEPKISLHQGLPMMVSDFRQRVFGDHKEEGTTSTMSTS 443
>gi|116786981|gb|ABK24329.1| unknown [Picea sitchensis]
Length = 417
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 159/360 (44%), Gaps = 73/360 (20%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQ 71
+P+ I + G GF+GSHL +++L H I+ + + + + H P +
Sbjct: 108 QPLRIVVTGGAGFVGSHLVDRLLERGDHVIVIDNFFTGRKENVMHHFKNPRFEL------ 161
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD +E ++ D +LA +P Y P+ TI +N + L ++
Sbjct: 162 -----IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVMGTLNMLGLAKRIG 215
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAK 189
R + ST EVYG DP L+ + +G++ R Y K
Sbjct: 216 ARFLLTSTSEVYG---------------DP----LQHPQTETYWGNVNPIGVRSCYDEGK 256
Query: 190 QLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 247
+ E L Y GA +E I R FN GPRM G RV++ F LR+
Sbjct: 257 RTAETLTMDYHRGA--NVEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRK 305
Query: 248 QPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMM 305
+PL + G+ R+F Y+ D +E ++ ++E + H+ FN+GNP E T+ +LAE++
Sbjct: 306 EPLTVYGDGKQTRSFQYVSDLVEGLIRLME-----SNHVGPFNLGNP-GEFTMLELAEVV 359
Query: 306 TEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
E T+D ++K EF DD KR PD+T L W PK SL + L
Sbjct: 360 KE--------------TIDSNAKIEFKENTADDPHKRKPDITKAKDLLKWEPKISLREGL 405
>gi|449459910|ref|XP_004147689.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis
sativus]
gi|449523904|ref|XP_004168963.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis
sativus]
Length = 344
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 155/345 (44%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++++ ++++ D Y K L G R + I+H
Sbjct: 35 ILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLR--KWIGHPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ T +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLVEVDQIYHLACPASPIFYKYNPVKTTKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P P QD +Y+ + +P R Y K++ E L++
Sbjct: 148 SEVYGD------PLVHP--QDESYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 190
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 191 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFLAQAIRSEPLTVQAPGTQT 241
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D +E ++ ++E N N+GNP E T+ +LAE + E L
Sbjct: 242 RSFCYVSDMVEGLIRLMEG---DNTGPINIGNP-GEFTMLELAETVKE----------LI 287
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V++ E DD +R PD+T + LGW PK +L D L
Sbjct: 288 NPNVEIVMVE---NTPDDPRQRKPDITKAQEVLGWEPKINLRDGL 329
>gi|291288341|ref|YP_003505157.1| NAD-dependent epimerase/dehydratase [Denitrovibrio acetiphilus DSM
12809]
gi|290885501|gb|ADD69201.1| NAD-dependent epimerase/dehydratase [Denitrovibrio acetiphilus DSM
12809]
Length = 316
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 156/355 (43%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD----VYNDKIKHLLEPESQTGADRIQFHRL 75
+ + G GFIGSHLCE+ LLE H++L +D D IK L++ + +F R
Sbjct: 4 VLVTGGAGFIGSHLCER-LLEQGHEVLCVDNLFTSRKDNIKKLMDNKD------FEFMRH 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ +E D NLA +P Y P+ T ++ + A+ ++ +
Sbjct: 57 DVTFPLSVE-----VDQIYNLACPASPVHYQFDPVQTTKTSVMGAINMLGLAKRLKIPVF 111
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG D + P Y K +P R Y K+ E L
Sbjct: 112 QASTSEVYG---------DPEIHPQPESY--KGSVNPI------GVRACYDEGKRCAETL 154
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++GL+ +VR FN GP+M P +G RV++ F LR + + +
Sbjct: 155 FFDYKRQHGLDIKVVRIFNTYGPKMH-------PQDG--RVVSNFIMQALRGEDITIYGE 205
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R+F Y+ D ++ + M+ P G + N+GNP NE T+ QLAE++ ++ +
Sbjct: 206 GKQTRSFCYVDDMVDGFMKMMNTPEGFTGPV-NLGNP-NEFTILQLAELVIKIIGNKNNI 263
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ ++L W P L + + T+ Y
Sbjct: 264 IFKPLPQ-------------DDPMQRKPDITLAKRELEWEPAVMLEEGIVKTIEY 305
>gi|389690169|ref|ZP_10179186.1| nucleoside-diphosphate-sugar epimerase [Microvirga sp. WSM3557]
gi|388589687|gb|EIM29975.1| nucleoside-diphosphate-sugar epimerase [Microvirga sp. WSM3557]
Length = 361
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 153/351 (43%), Gaps = 49/351 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE++L E H++ LD ++ E + D +FH + H
Sbjct: 37 ILVTGGAGFLGSHLCERLLNEG-HEVTCLDDFSTG----QERNIRKLRDSSRFHV--VSH 89
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D + D NLA +P Y P+ T+ ++ + AL ++ ++ ST
Sbjct: 90 DVATP-FVADVDEIYNLACPASPPHYQADPVRTMRTSVLGALNILDLARSRGIKVFQAST 148
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
E+YG P P Q AY+ P R Y K+ E L +
Sbjct: 149 SEIYGD------PDIHP--QPEAYWGNVNPIGP---------RSCYDEGKRCAETLFFDY 191
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ + +VR FN GPRM P +G RV++ F L+ + + + G
Sbjct: 192 ARNHDVRIKVVRIFNTYGPRMH-------PEDG--RVVSNFIVQALKGEDITVYGDGAQT 242
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D IE + ++ P G I N+GNP E T+ +LAE++ ++ S L
Sbjct: 243 RSFCYVDDLIEGFVRLMNAPNDVTGPI-NIGNP-GEFTMLELAEIVIDLVNSPSRIVHLP 300
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ + ++LGW P+ L D L T++Y
Sbjct: 301 LPV-------------DDPRQRRPDIEVAKRELGWTPRIKLMDGLRLTISY 338
>gi|424879892|ref|ZP_18303524.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516255|gb|EIW40987.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 348
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 154/355 (43%), Gaps = 49/355 (13%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
P + + G GF+GSHLCE LL H+++ LD ++ ++ + + DR
Sbjct: 28 SPKRVLVTGGAGFLGSHLCET-LLAAGHQVICLDNFSTGMRRNIVHLKRV--DRFNVVAH 84
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+I H LE D NLA +P Y P+ T + + +L +++ + R++
Sbjct: 85 DIVHPLDLE-----VDEIYNLACPASPPHYQADPIHTTKTCVLGSLNLLELAARTGARIL 139
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P P Q +Y+ P R Y K+ E L
Sbjct: 140 QASTSEVYGD------PNVHP--QVESYWGNVNSFGP---------RSCYDEGKRCAETL 182
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ +G+E I+R FN GPR+ P +G RV++ F L Q + +
Sbjct: 183 FFDFHNTHGVEIKIIRIFNTYGPRIR-------PDDG--RVVSNFIVQALTGQDITIYGD 233
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F ++ D I ++ M+ +P+ G + N+GNP E T+R+LAE + + S
Sbjct: 234 GSQTRSFCFVDDLIGGMVRMMASPSSLTGPV-NLGNP-GEFTIRELAEQVIGLTGSRSQI 291
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+++ Q+L W PK L L T+ Y
Sbjct: 292 IHRALPV-------------DDPRQRRPDISLAMQELDWRPKIDLSSGLRQTIDY 333
>gi|262199233|ref|YP_003270442.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM
14365]
gi|262082580|gb|ACY18549.1| NAD-dependent epimerase/dehydratase [Haliangium ochraceum DSM
14365]
Length = 311
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 153/353 (43%), Gaps = 58/353 (16%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GFIGSHLCE+ LL+ H+++ D + D I HL R + +
Sbjct: 5 VTGGAGFIGSHLCER-LLDDGHEVVCADNFYTGSEDNIAHL----------RARPGFTLL 53
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD +E + A+ +LA +P Y P+ TI ++ + A+ +++ C RL+
Sbjct: 54 RHDV-VEPVPCEAERIYHLACPASPVHYQRDPVKTIQTSVLGAMHLLEQCRVTGARLLIA 112
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EVYG P P Q +Y+ P R Y K++ E L +
Sbjct: 113 STSEVYGD------PTVHP--QSESYWGHVNPIGP---------RACYDEGKRVAETLCF 155
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
+G++ +VR FN GPRM G RV++ F LR +PL + G
Sbjct: 156 DYQRRDGVDIRVVRIFNTYGPRMAMNDG---------RVVSNFVVQALRGEPLTIYGDGN 206
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ + +E ++ M+ A N+GNP E T+R+LAE + + S
Sbjct: 207 QTRSFCYVDELVEGMVRMMNQDADTGP--VNLGNP-AEYTIRELAERVLTLTGSSSRVMH 263
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ L W P+ SL LE T+ Y
Sbjct: 264 QALPA-------------DDPVRRKPDIARARTLLEWTPRISLEQGLERTIAY 303
>gi|301062509|ref|ZP_07203152.1| NAD-binding protein [delta proteobacterium NaphS2]
gi|300443366|gb|EFK07488.1| NAD-binding protein [delta proteobacterium NaphS2]
Length = 317
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 164/365 (44%), Gaps = 63/365 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLE-PESQTGADRIQFHR 74
I + G GF+GSHLC++++ E H +L LD + I HL++ P +
Sbjct: 8 ILVTGGAGFLGSHLCDRLIREG-HDVLCLDNFFTGTKKNILHLMQNPNFEL--------- 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD +++ D NLA +P Y P+ T+ +N + ++ ++ + ++
Sbjct: 58 --IRHDLAFPVFLEV-DEIYNLACPASPIHYQHNPVKTVKTNVLGSIHMLGLAKRVHAKV 114
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLI 192
+ ST EVYG DP + KE +G++ R Y K+
Sbjct: 115 LQASTSEVYG---------------DPTVHPQKES----YWGNVNTIGIRSCYDEGKRCA 155
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L + +N + +VR FN GPRM P++G RV++ F L+ Q + +
Sbjct: 156 ETLFFDYHRQNHVNIRVVRIFNTYGPRMH-------PNDG--RVVSNFIVQALKNQDITV 206
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F Y+ D ++ ++ M+ G + N+GNP E T+ +LAE + ++
Sbjct: 207 YGDGSQTRSFCYVDDLVDGMVRMMNGSDDFVGPV-NLGNP-KEFTILELAEQIIQMTGSR 264
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
SG P DD +R PD+++ ++L W P T+L L+ST+ Y
Sbjct: 265 SGVVFRSLPQ-------------DDPLQRQPDISLAKEKLQWEPATALETGLQSTIAYFR 311
Query: 373 RTYAE 377
+ E
Sbjct: 312 KALRE 316
>gi|190889705|ref|YP_001976247.1| dTDP-glucose 4,6-dehydratase [Rhizobium etli CIAT 652]
gi|190694984|gb|ACE89069.1| probable dTDP-glucose 4,6-dehydratase protein [Rhizobium etli CIAT
652]
Length = 340
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 153/347 (44%), Gaps = 49/347 (14%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83
G GF+GSHLCE++LL + ++ LD ++ + ++ RI I+HD R
Sbjct: 29 GGAGFLGSHLCERLLLRG-YSVICLDNFSTGRRVNVDHLQSNPRFRI------IEHDVR- 80
Query: 84 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143
+ A L N A+ +P DY P+ T+ +N + A+ + + ++ ST EVY
Sbjct: 81 QPFDIAASLIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDCGRKTGAIVVQSSTSEVY 140
Query: 144 GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN 203
G P SP R+ + C + R Y K+ E L +
Sbjct: 141 GD------PSQSPQRE-----------TYCGNVNPIGPRACYDEGKRSAETLFFDYHRTY 183
Query: 204 GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFI 263
G++ I R FN GPRM G RV++ F LR L + GQ R+F
Sbjct: 184 GVDIKIGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNADLTIYGDGQQTRSFC 234
Query: 264 YIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV 323
Y+ D +E L + + +G I N+GNP E TVR+LAE++ ++ S L P V
Sbjct: 235 YVDDLVEGFLRLSAAGSACHGPI-NLGNP-GEFTVRRLAEIIRDLTNSRSRIVHL--PAV 290
Query: 324 DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
DD +R PD+T +LGW P+ +L L T+ Y
Sbjct: 291 -----------VDDPRQRRPDITRAMTELGWQPQIALEAGLARTVEY 326
>gi|378763419|ref|YP_005192035.1| NAD-dependent epimerase/dehydratase family protein [Sinorhizobium
fredii HH103]
gi|365183047|emb|CCE99896.1| NAD-dependent epimerase/dehydratase family protein [Sinorhizobium
fredii HH103]
Length = 347
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 166/362 (45%), Gaps = 57/362 (15%)
Query: 13 RPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQF 72
+P P I + G GF+GSHLC +LLE H+++ D ++ ++ +EP R
Sbjct: 23 QPEVPKRILITGGAGFLGSHLC-GLLLEAGHQVICADNFSTGLRQNVEP-----LKRFDN 76
Query: 73 HRLNIKHDSRLEGLIKMADLTI----NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCS 128
RL I HD +++ DL I NLA +P Y P+ T + + +L +++ +
Sbjct: 77 FRL-IAHD-----IVEPIDLAIDEIYNLACPASPPHYQADPIHTTKTCVLGSLNMLELAA 130
Query: 129 ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACA 188
+ R++ ST E+YG P+ P Q +Y+ + +P FG R Y
Sbjct: 131 RHGARILQASTSEIYGD------PQVHP--QVESYW---GNVNP--FGP----RSCYDEG 173
Query: 189 KQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
K+ E L + +E +VR FN GPRM P +G RV++ F L+ +
Sbjct: 174 KRCAETLFFDFHRTRQVEIKVVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGE 224
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV 308
+ + G R+F ++ D I+ + ++ +PA G I N+GNP E T+ +LAE + +
Sbjct: 225 DITIYGDGSQTRSFCFVDDLIDGFVRVMASPASLTGPI-NLGNP-GEFTIGELAEQVVGL 282
Query: 309 YAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
S P DD +R PD+++ ++LGW P+ L L T+
Sbjct: 283 TGSRSRIVYRPLPV-------------DDPRQRRPDISLAERELGWRPRIDLAAGLAQTI 329
Query: 369 TY 370
+
Sbjct: 330 GH 331
>gi|423375564|ref|ZP_17352900.1| hypothetical protein IC5_04616 [Bacillus cereus AND1407]
gi|423577701|ref|ZP_17553820.1| hypothetical protein II9_04922 [Bacillus cereus MSX-D12]
gi|401091828|gb|EJP99967.1| hypothetical protein IC5_04616 [Bacillus cereus AND1407]
gi|401204405|gb|EJR11222.1| hypothetical protein II9_04922 [Bacillus cereus MSX-D12]
Length = 321
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 162/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYDVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F LR + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALRGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++A ++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAAVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|312137032|ref|YP_004004369.1| nad-dependent epimerase/dehydratase [Methanothermus fervidus DSM
2088]
gi|311224751|gb|ADP77607.1| NAD-dependent epimerase/dehydratase [Methanothermus fervidus DSM
2088]
Length = 314
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 166/365 (45%), Gaps = 62/365 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHL E+ + E HK+L +D + IK L++ + +F +L
Sbjct: 3 ILITGVAGFIGSHLAERFIKEG-HKVLGVDNFITGNFRNIKKLVK------SPNFKFKKL 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+I + + AD+ ++ A+ +P DY PL+T+ + + +N+ R I
Sbjct: 56 DISKKT----IDFDADIVMHFASPASPVDYYRYPLETLKAGSYGTFNTLNIARKNDARYI 111
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KE +G++ R Y AK+ E
Sbjct: 112 LASTSEVYG---------------DPEVHPQKE----SYWGNVNPIGPRAVYDEAKRFAE 152
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
A E GL+ I+R FN GPRM P +G RV+ F L+ + + +
Sbjct: 153 ATTAAYHREFGLDTRIIRIFNTYGPRMK-------PDDG--RVIPNFITQALKGEKITVY 203
Query: 254 DGGQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R+F YI D +E + L I++ +G + N+GNP E + LA+++ ++ K
Sbjct: 204 GDGTQTRSFCYIDDLVEGIYRLSIKD--NLDGEVVNLGNPE-EYRIIDLAKLIIDLVGK- 259
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
++++ K+ DD +R PD+T + +GW PKT L L+ T+ Y
Sbjct: 260 ---------DLEITYKKL---PKDDPKRRRPDITKAKKLIGWEPKTPLKIGLKKTIKYFK 307
Query: 373 RTYAE 377
+ E
Sbjct: 308 KILGE 312
>gi|83815883|ref|YP_446800.1| UDP-glucuronate decarboxylase [Salinibacter ruber DSM 13855]
gi|294508730|ref|YP_003572789.1| dTDP-glucose 4-6-dehydratase [Salinibacter ruber M8]
gi|83757277|gb|ABC45390.1| UDP-glucuronate decarboxylase [Salinibacter ruber DSM 13855]
gi|294345059|emb|CBH25837.1| dTDP-glucose 4-6-dehydratase [Salinibacter ruber M8]
Length = 321
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 151/355 (42%), Gaps = 59/355 (16%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GSHLC++ +E H ++ +D + I+HL E G DR +F ++
Sbjct: 6 ITGGAGFLGSHLCDR-FIEEGHSVICMDNLITGDTENIEHLFE----LGQDRFRFVEYDV 60
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ G + D ++ A+ P DY P+ T+ + + + RL+
Sbjct: 61 TDYLHVNGEL---DYVLHFASPAAPDDYLQYPIQTLKVGALGTHKALGLAKAKDARLLIA 117
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERL 195
ST EVYG DP + ED +G++ +R Y AK+ E L
Sbjct: 118 STSEVYG---------------DPQVHPQSED----YWGNVNPVGKRGVYDEAKRFGEAL 158
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +G+E I R FN GPRM G R L F + LR PL +
Sbjct: 159 TMAYHRYHGVETRIARIFNTYGPRMRIDDG---------RALPNFMSQALRGDPLTVYGD 209
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R F Y+ D +E + ++ + A N+GNP +E+T+++ AE + EV S
Sbjct: 210 GSQTRAFCYVDDLVEGLYRLLMSDATDP---VNIGNP-DEITIKEFAEEIIEVTDSDSDI 265
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P+ DD R PD++ ++LGW P+ + L TL Y
Sbjct: 266 TYEPLPS-------------DDPQVRQPDISRAREELGWTPEVDRREGLRRTLEY 307
>gi|147921373|ref|YP_684813.1| putative dTDP-glucose 4-6-dehydratase [Methanocella arvoryzae
MRE50]
gi|110620209|emb|CAJ35487.1| putative dTDP-glucose 4-6-dehydratase [Methanocella arvoryzae
MRE50]
Length = 318
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 158/353 (44%), Gaps = 48/353 (13%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
VT + G GFIGSHLCE +L + + I ++ + +++++ G DR +F R +I
Sbjct: 3 VTSLVTGGSGFIGSHLCEYLLGKGENVIAVDNLGSGRLENI---GGVMGNDRFRFIRHDI 59
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ +++G I D NLA+ +P D+ T+ + + +N + +++ E R +
Sbjct: 60 REPLQIDGKI---DFVYNLASRASPVDFFTQAEEILMTNSLGTYNMIQLALEKKARFLEA 116
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST E YG P SP Q Y+ P R Y AK+ E L
Sbjct: 117 STSESYGD------PTISP--QPETYWGNVNPIGP---------RGCYDEAKRFSEALTM 159
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A +GL+ I+R FN GPRM P +G RV+ F+ L +P+ + G
Sbjct: 160 AFVRYHGLDGRIIRIFNTYGPRMR-------PDDG--RVVPNFTMQALAGEPMTVYGEGS 210
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D + + L + R G + N+GNP E+TV + A+ + + S
Sbjct: 211 QTRSFCYVSDLVRGIYLAMNRDVR--GEVINLGNP-TEMTVLEFAKKIKAITGSSSEIVF 267
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P +D +R PD+ + LGW P+ L + L+ T+ +
Sbjct: 268 RPLPE-------------NDPMQRRPDIGKAKRLLGWEPEVGLDEGLQLTIEW 307
>gi|39996914|ref|NP_952865.1| UDP-glucuronate decarboxylase [Geobacter sulfurreducens PCA]
gi|409912336|ref|YP_006890801.1| UDP-glucuronate decarboxylase [Geobacter sulfurreducens KN400]
gi|39983802|gb|AAR35192.1| UDP-glucuronate decarboxylase [Geobacter sulfurreducens PCA]
gi|298505927|gb|ADI84650.1| UDP-glucuronate decarboxylase [Geobacter sulfurreducens KN400]
Length = 311
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 152/354 (42%), Gaps = 56/354 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ-FHRLNIK 78
I + G GFIGSHLCE+ LLE H +L LD + S+ DR+ FHR +
Sbjct: 3 ILVTGGAGFIGSHLCER-LLEQGHDVLCLDNFFTG--------SKRNIDRLMDFHRFEVI 53
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+E ++ D NLA +P Y P+ TI ++ + + ++ R++ S
Sbjct: 54 RHDIIEPILLEVDRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRARILQAS 113
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLI 196
T EVYG D + P Y +G++ R Y K++ E L+
Sbjct: 114 TSEVYG---------DPTIHPQPESY----------WGNVNPIGIRSCYDEGKRVAETLL 154
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+NG++ I R FN GPRM +E RV++ F LR + L + G
Sbjct: 155 MDYHRQNGVDIRIARIFNTYGPRM---------AEHDGRVVSNFVVQALRGEDLTVYGDG 205
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F Y+ D ++ ++ ++E+ N+GNP E + + A + + S
Sbjct: 206 SQTRSFCYVDDLLDGLVTLMEHDQFCGP--VNLGNP-EETPIIEFARRIIAMTGSSSQII 262
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P+ DD +R PD+T+ LGW P+ SL + L T+ Y
Sbjct: 263 YRPLPS-------------DDPRQRQPDITLARTILGWEPRVSLDEGLAKTIEY 303
>gi|410671575|ref|YP_006923946.1| NAD-dependent epimerase/dehydratase [Methanolobus psychrophilus
R15]
gi|409170703|gb|AFV24578.1| NAD-dependent epimerase/dehydratase [Methanolobus psychrophilus
R15]
Length = 308
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 156/356 (43%), Gaps = 64/356 (17%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLN-IKH 79
+ G GF+GSHLC+ +L+E HK++ +D + K K++ + I+F +KH
Sbjct: 5 VTGGAGFLGSHLCD-LLIEKGHKVICIDNLVTGKTKNI---------EHIRFENFTYLKH 54
Query: 80 D-SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
D ++ D +LA+ +P DY P+ T+ + ++ E+ RL+ S
Sbjct: 55 DITKPVYFGDKIDYIFHLASPASPVDYLELPIQTLKVGALGTYNMLGLAKEHKARLLLAS 114
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLI 196
T EVYG D + P Y +G++ R Y AK+ E +
Sbjct: 115 TSEVYG---------DPLVNPQPETY----------WGNVNPIGPRGVYDEAKRYAEAIT 155
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
A +G+E I R FN GPRM G RV+ F N L+ + + + G
Sbjct: 156 MAYHTHHGIETRIARIFNTYGPRMRANDG---------RVVPNFINQALKGEDITVYGDG 206
Query: 257 QSQRTFIYIKDAIEAV--LLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
+ R+F Y+ D IE + L+M E+ N +GNP E+TV + AE + E+ VS
Sbjct: 207 KQTRSFCYVSDLIEGIYRLMMSEHTDPVN-----IGNP-AEMTVLEFAERIIEITGSVSR 260
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
E P DD R PD+T + LGW PK L D L T+ Y
Sbjct: 261 IVYEELPV-------------DDPKVRRPDITRAREVLGWEPKVKLADGLRETIEY 303
>gi|224064446|ref|XP_002301480.1| predicted protein [Populus trichocarpa]
gi|222843206|gb|EEE80753.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 176/395 (44%), Gaps = 65/395 (16%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEP 61
+G + L L + ++ I + G GF+GSHL ++++ I+ + + + ++++
Sbjct: 94 SGGKIPLGLKSKSLR---IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH- 149
Query: 62 ESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDAL 121
R + I+HD +E L+ D +LA +P Y P+ TI +N + L
Sbjct: 150 --HFKNPRFEL----IRHDV-VEPLLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTL 202
Query: 122 PVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ 181
++ R + ST EVYG PL Q P + +P
Sbjct: 203 NMLGLAKRVGARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GV 245
Query: 182 RWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLAC 239
R Y K+ E L Y GA G+E I R FN GPRM G RV++
Sbjct: 246 RSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDG---------RVVSN 294
Query: 240 FSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVT 297
F LR++P+ + G+ R+F ++ D +E ++ ++E H+ FN+GNP E T
Sbjct: 295 FVAQALRKEPMTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFT 348
Query: 298 VRQLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNP 356
+ +LA+++ E T+D +++ EF DD KR PD+T LGW P
Sbjct: 349 MLELAQVVQE--------------TIDPNARIEFRPNTEDDPHKRKPDITKAKDLLGWEP 394
Query: 357 KTSLWDLLESTLT-YQHRTYAEAIKQAVAKPVASS 390
K SL L ++ ++ R + + ++ +++S
Sbjct: 395 KISLRQGLPMMVSDFRQRVFGDHKEEGTTSTMSTS 429
>gi|423370290|ref|ZP_17347712.1| hypothetical protein IC3_05381 [Bacillus cereus VD142]
gi|401074229|gb|EJP82634.1| hypothetical protein IC3_05381 [Bacillus cereus VD142]
Length = 321
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 162/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + ++ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKNKYHNELMKE-----LRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
S + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KSSIHELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +R +AE + ++ +S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKNIRVVAEDIKKLTKSIS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVHVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|358248590|ref|NP_001239907.1| uncharacterized protein LOC100790835 [Glycine max]
gi|255641885|gb|ACU21211.1| unknown [Glycine max]
Length = 348
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 155/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++++ ++++ D Y K L+ G R + I+H
Sbjct: 37 ILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLK--KWIGHPRFEL----IRH 90
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 91 DV-TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 149
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG D + P Y +G++ R Y K++ E L++
Sbjct: 150 SEVYG---------DPLVHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 190
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F LR +PL + G
Sbjct: 191 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEPLTVQCPGT 241
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E +N N+GNP E T+ +LAE + E
Sbjct: 242 QTRSFCYVSDLVDGLIRLMEG---SNTGPINLGNP-GEFTMTELAETVKE---------- 287
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V++ E DD +R PD+T + LGW PK L D L
Sbjct: 288 LINPGVEIKMVE---NTPDDPRQRKPDITKAKELLGWEPKVKLRDGL 331
>gi|405379062|ref|ZP_11032968.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
gi|397324433|gb|EJJ28792.1| nucleoside-diphosphate-sugar epimerase [Rhizobium sp. CF142]
Length = 339
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 160/358 (44%), Gaps = 61/358 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
T+ + G GF+GSHLCE+ LLE H+++ LD + + I+HLL Q R+
Sbjct: 23 TVLVNGGAGFLGSHLCER-LLERGHQVICLDNFYTGRHVNIEHLL----QNARFRL---- 73
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD R I+ A + N A+ +P DY P+ T+ +N + A+ + + +
Sbjct: 74 --LEHDVRQPYDIE-ASVIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDAARRSGATV 130
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLI 192
+ ST EVYG P ++P R+ FG++ R Y K+
Sbjct: 131 VQSSTSEVYGD------PHENPQRE-------------TYFGNVNPIGPRGCYDEGKRSA 171
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L + + G++ + R FN GPRM G RV++ F L + +
Sbjct: 172 ETLFFDYHRKYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALSNADITI 222
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G+ R+F Y+ D + L + G I N+GNP E+TVR LAE++ ++
Sbjct: 223 YGDGRQTRSFCYVDDLVAGFLRFADAGEHCVGPI-NLGNPA-EITVRDLAEIVLDLTNSR 280
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S L P V DD +R PD++ ++L W P T L L+ T+ Y
Sbjct: 281 SRIIYL--PAV-----------ADDPQQRRPDISRAREELNWWPTTELKTGLKRTIAY 325
>gi|39933250|ref|NP_945526.1| sugar nucleotide dehydratase [Rhodopseudomonas palustris CGA009]
gi|39652875|emb|CAE25617.1| putative sugar nucleotide dehydratase [Rhodopseudomonas palustris
CGA009]
Length = 315
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 159/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC+K+L E H++L +D Y I+HL+ G R +
Sbjct: 7 ILVSGGAGFIGSHLCDKLLAEG-HEVLCVDNYFTGWRRNIEHLV------GTPRFEV--- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D+ NLA +P Y P+ T+ ++ A+ ++ ++
Sbjct: 57 -MRHDVTFPLYVEVDDI-YNLACPASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG D + P Y +G + R Y K+ E
Sbjct: 115 QASTSEVYG---------DPNVHPQPESY----------WGHVNPLGIRACYDEGKRAAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ ++ + R FN GPRM P++G RV++ F L + +
Sbjct: 156 TLFFDYHRQHKVKIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALSGNDITIY 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D ++ ++ G + N+GNP E T+RQLAEM+ E+ S
Sbjct: 207 GDGSQTRSFCYVTDLLDGFARLMATGDEFIGPV-NLGNP-VEFTIRQLAEMVIEMTDSRS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ P+ DD +R PD+++ ++LGW PK L D L+ T+ Y
Sbjct: 265 KLVMMPLPS-------------DDPRQRQPDISLARRELGWEPKVPLADGLKETIGY 308
>gi|421600692|ref|ZP_16043656.1| sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp.
CCGE-LA001]
gi|404267203|gb|EJZ31919.1| sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp.
CCGE-LA001]
Length = 340
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 163/357 (45%), Gaps = 59/357 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYN---DKIKHLLEPESQTGADRIQFHRL 75
+ + G GFIGSHLC+ LL+ ++++ LD ++ D I+ LL + +F
Sbjct: 1 MLIAGGAGFIGSHLCDS-LLQRGNRVICLDNLFTGSVDNIRPLLNHPN------FRF--- 50
Query: 76 NIKHDSRLEGLIK-MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD R E ++ D +LA +P Y P+ T+ + + + +++ R+
Sbjct: 51 -IEHDVRDEIEVEDEIDRIYSLACPASPRHYQKDPVGTMKTCVLGTINMLELARRKGARV 109
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG D + P Y+ + +P R Y K+ E
Sbjct: 110 LQASTSEVYG---------DPEVHPQPESYL--GNVNPI------GPRACYDEGKRAAET 152
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L++ +G E + R FN GPRM E RV++ F LR +P+ +
Sbjct: 153 LMFDYQRTHGTEIKVARIFNTYGPRM---------LENDGRVVSNFIVQALRGEPITIYG 203
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLA-EMMTEVYAKVS 313
GG R+F ++ D + + L++E+PA G N+GNPH EVT+ +A E++T
Sbjct: 204 GGTQTRSFCFVDDLVRGLQLLMESPASVTGPC-NLGNPH-EVTIETIAREVLTY------ 255
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S+ F DD +R P + + LGW P+ +L D L++T+ Y
Sbjct: 256 --------TESASTLRFEALPKDDPKRRKPVIDTATRLLGWRPRVALRDGLQATIAY 304
>gi|213950355|gb|ACJ54442.1| UDP-glucuronic acid decarboxylase 3 [Gossypium hirsutum]
Length = 345
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 156/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L G R + I+H
Sbjct: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGPKDNLR--KWIGHPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D + L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TQPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG D + P Y +G++ R Y K++ E L++
Sbjct: 148 SEVYG---------DPLIHPQPETY----------WGNVNPIGVRSCYDEGKRVAETLMF 188
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F LR +PL + G
Sbjct: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEPLTVQKPGT 239
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E G I N+GNP E T+ +LAE + E
Sbjct: 240 QTRSFCYVSDMVDGLIRLME--GEHTGPI-NIGNP-GEFTMVELAETVKE---------- 285
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L +P V+++ E DD +R PD+T + LGW PK L D L
Sbjct: 286 LIKPDVEINMVE---NTPDDPRQRKPDITKAKELLGWEPKVKLRDGL 329
>gi|159900946|ref|YP_001547193.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
gi|159893985|gb|ABX07065.1| NAD-dependent epimerase/dehydratase [Herpetosiphon aurantiacus DSM
785]
Length = 318
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 158/367 (43%), Gaps = 61/367 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + GA GF+GSHLCE+ L E H ++ +D + + I HL+ G + QF R
Sbjct: 3 VLITGAAGFLGSHLCERFLSEG-HSVVGMDNFITGNPENIAHLV------GREGFQFIRH 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + L G + D ++ A+ +P DY P+ T+ + + R +
Sbjct: 56 DVTNYIFLPGPL---DAVLHFASPASPIDYLELPIQTLKVGALGTHNALGLAKAKGARFL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P Q Y+ P R Y AK+ E +
Sbjct: 113 IASTSEVYGD------PQVHP--QPETYWGHVNPIGP---------RGVYDEAKRFAEAM 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +G++ IVR FN GPRM G RV+ F LR + L L
Sbjct: 156 TMAYHTYHGVQTRIVRIFNTYGPRMRLADG---------RVVPNFIQQALRGEALTLYGD 206
Query: 256 GQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F ++ D +E V L++ + N+GNPH E T+R+ AE++ + +G
Sbjct: 207 GLQTRSFQFVGDLVEGVYRLLLSDEVEP----VNIGNPH-EFTMREFAEIVNAMTGNPAG 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
E + DD R PD++ + L W P+ +L LE T+ +
Sbjct: 262 TVIKPELRIK-----------DDPQNRQPDISKAKRVLNWEPQVTLQAGLEQTIPW---- 306
Query: 375 YAEAIKQ 381
+AE ++Q
Sbjct: 307 FAEQLRQ 313
>gi|398822753|ref|ZP_10581129.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. YR681]
gi|398226590|gb|EJN12836.1| nucleoside-diphosphate-sugar epimerase [Bradyrhizobium sp. YR681]
Length = 320
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 162/360 (45%), Gaps = 67/360 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN--- 76
I + G GFIGSH+CE+ LL+ ++++ D Y TG+ R H ++
Sbjct: 11 ILVTGGAGFIGSHICER-LLDAGAEVVSADNYF------------TGSRRNIAHLISNPL 57
Query: 77 ---IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
++HD I++ D NLA +P Y P+ T ++ A+ ++ R
Sbjct: 58 FEAVRHDVTFPLYIEV-DAIFNLACPASPIHYQRDPVQTTKTSVHGAINMLGLAKRLKAR 116
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQL 191
+ ST EVYG DP + ED +G++ R Y K+
Sbjct: 117 IFQASTSEVYG---------------DPLIHPQTED----YWGNVNPIGIRSCYDEGKRC 157
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + ++GL + R FN GPRM P++G RV++ F L+ +P+
Sbjct: 158 AETLFFDYWRQHGLPIKVARIFNTYGPRMQ-------PNDG--RVVSSFIVQALQGEPIT 208
Query: 252 LV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
+ DGGQ+ R+F Y+ D +EA+L ++ G I N+GN ++E T+R+LAE + E+
Sbjct: 209 VFGDGGQT-RSFCYVDDLVEAILRLMVTNEDVTGPI-NIGN-NSEFTIRELAEKVIELTG 265
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S P DD +R PD+T L W PK +L D L+ T+ Y
Sbjct: 266 SRSKLVFKPLPQ-------------DDPRQRQPDLTKAKAVLNWQPKVALEDGLKETIAY 312
>gi|356519958|ref|XP_003528635.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]
Length = 421
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 170/378 (44%), Gaps = 62/378 (16%)
Query: 7 RLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTG 66
R+ L R K + + G GF+GSHL ++++ I+ +++ + +++L G
Sbjct: 88 RVPLGVRGKKQKRVLVTGGAGFVGSHLVDRLIERGDSVIVVDNLFTGRKENVLH---HMG 144
Query: 67 ADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
+ I+HD +E ++ D +LA +P Y P+ TI +N + L ++
Sbjct: 145 NPNFEL----IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGL 199
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
R + ST EVYG PL Q P + +P R Y
Sbjct: 200 AKRVGARFLISSTSEVYG----------DPL-QHPQAETYWGNVNPI------GVRSCYD 242
Query: 187 CAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
K+ E L Y GA G+E I R FN GPRM G RV++ F
Sbjct: 243 EGKRTAETLAMDYHRGA--GIEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQA 291
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLA 302
LR++PL + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA
Sbjct: 292 LRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELA 345
Query: 303 EMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLW 361
+++ E T+D ++K EF DD KR PD++ + LGW P SL
Sbjct: 346 QVVQE--------------TIDPNAKIEFRPNTEDDPHKRKPDISKAKELLGWQPTVSLR 391
Query: 362 DLLESTLT-YQHRTYAEA 378
+ L ++ ++ R + ++
Sbjct: 392 EGLPLMVSDFRQRLFGDS 409
>gi|222148125|ref|YP_002549082.1| dTDP-glucose 4-6-dehydratase [Agrobacterium vitis S4]
gi|221735113|gb|ACM36076.1| dTDP-glucose 4-6-dehydratase [Agrobacterium vitis S4]
Length = 331
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 157/370 (42%), Gaps = 48/370 (12%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K T + G GF+GSH+C ++L E ++ LD + +EP ++ F
Sbjct: 3 KTRTALVTGGAGFLGSHVCARLLNEG-CDVVCLDNLQTGRRKNIEP--LLANPKLSF--- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
IK D R + D NLA +P Y P+ T+ N + V+ R+
Sbjct: 57 -IKADVRDPLPQGVYDEIWNLACPASPPQYQIDPVGTMLINVLGMKNVLDLAVACGARVF 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST E+YG P+ P Q +Y P R Y K+ E L
Sbjct: 116 QASTSEIYGD------PQVHP--QTESYRGAVNTIGP---------RACYDEGKRAAETL 158
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++G+E +VR FN GP MD P +G RV++ F L PL+L G
Sbjct: 159 CFDYHRQHGVEIKVVRIFNTYGPNMD-------PQDG--RVVSNFIVRALEEAPLELYGG 209
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F Y+ D IE ++ + A G + N+G+P E TVR+LA+++ E+ S
Sbjct: 210 GTQTRSFCYVDDLIEGFFRLMRSDASITGPV-NIGDP-GEFTVRELADIILEMTGSRS-- 265
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTY 375
++ P DD R PD+T+ Q LGW PK L + L+ ++ Y
Sbjct: 266 VIVDRPLPK-----------DDPLLRRPDITLAGQLLGWEPKVRLREGLKRSIPYFAAET 314
Query: 376 AEAIKQAVAK 385
I + A
Sbjct: 315 GRTINTSAAN 324
>gi|314954105|gb|ADT64849.1| putative epemerase/dehydratase [Burkholderia contaminans]
Length = 316
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 153/357 (42%), Gaps = 49/357 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE+ L+E H +L +D Y K T F L +H
Sbjct: 8 ILVTGGAGFLGSHLCER-LVELGHDVLCVDNYFTGTKQ----NVATLLGNPSFEAL--RH 60
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +++ D NLA +P Y P+ T ++ + A+ ++ + R++ ST
Sbjct: 61 DVTFPLYVEV-DEIYNLACPASPIHYQFDPVQTTKTSVMGAINMLGLAKRTHARVLQTST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG D + P Y + + +P R Y K+ E L +
Sbjct: 120 SEVYG---------DPDVHPQPESY--RGNVNPL------GPRACYDEGKRCAETLFFDY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ + +VR FN GPRM P++G RV++ F LR + + L G
Sbjct: 163 HRQQNVRIKVVRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEDITLYGDGSQT 213
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F Y+ D ++ ++ M+ PA G I N+GNPH E+ V +LA+++ + S
Sbjct: 214 RAFCYVDDMVDGLIRMMATPAELTGPI-NLGNPH-EIAVSELAQIILRLTGSKSRLVFRP 271
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA 376
P DD +R PD+++ L W P L L+ T+ Y T A
Sbjct: 272 LPK-------------DDPTQRCPDISLARTHLDWEPTIGLEAGLQRTIDYFCSTLA 315
>gi|410938859|ref|ZP_11370699.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira noguchii str. 2006001870]
gi|410786060|gb|EKR75011.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira noguchii str. 2006001870]
Length = 312
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 164/356 (46%), Gaps = 50/356 (14%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHR 74
+K I + G GFIGSHLCE++L E I +++ + K++ + S + +F R
Sbjct: 1 MKKQRILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLLSDP---KFEFIR 57
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I +LE D N+A +P Y + + TI +N + + ++ R+
Sbjct: 58 HDITDPIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVRARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P + P Q Y+ + +P R Y K++ E
Sbjct: 113 LQASTSEVYGN------PLEHP--QKEMYW---GNVNPIGI------RSCYDEGKRVAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + + ++ ++R FN GPRM P +G RV++ F L+++ + L
Sbjct: 156 LCFDYQRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKEDITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 207 EGDQTRSFCYVDDLVEGIVRMM-NTENFNGPV-NLGN-DGEFTVRELAELVLKETG--SS 261
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ +P DD +R PD+T+ QQLG+ PK L + + T+ Y
Sbjct: 262 SKIVHKPLPQ-----------DDPARRKPDLTLAKQQLGFEPKVPLVEGIRKTIEY 306
>gi|423664470|ref|ZP_17639635.1| hypothetical protein IKM_04860 [Bacillus cereus VDM022]
gi|401293041|gb|EJR98690.1| hypothetical protein IKM_04860 [Bacillus cereus VDM022]
Length = 321
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 163/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + ++ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKNKYHNELMKE-----LRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ +++ G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDIRVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +R +AE + ++ +S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKNIRVVAEDIKKLTKSIS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVHVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|225439840|ref|XP_002277802.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 1
[Vitis vinifera]
Length = 437
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 165/366 (45%), Gaps = 66/366 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++ I+ + + + ++++ G R + I+H
Sbjct: 123 IVVTGGAGFVGSHLVDKLIARGDDVIVIDNFFTGRKENVMH---HFGNPRFEL----IRH 175
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E ++ D +LA +P Y P+ TI +N + L ++ R + ST
Sbjct: 176 DV-VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFLLTST 234
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLI- 196
EVYG DP + KE +G++ R Y K+ E L
Sbjct: 235 SEVYG---------------DPLEHPQKE----TYWGNVNPIGVRSCYDEGKRTAETLTM 275
Query: 197 -YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
Y GAE +E I R FN GPRM G RV++ F +RRQPL +
Sbjct: 276 DYHRGAE--VEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQAIRRQPLTVYGD 324
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G+ R+F Y+ D ++ ++ ++E H+ FN+GNP E T+ +LAE++ E
Sbjct: 325 GKQTRSFQYVSDLVDGLVALMEGE-----HVGPFNLGNP-GEFTMLELAEVVKE------ 372
Query: 314 GEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT-YQ 371
T+D S+ EF DD KR PD++ + L W PK SL + L ++ +Q
Sbjct: 373 --------TIDSSATIEFKPNTADDPHKRKPDISRAKELLNWEPKISLREGLPLMVSDFQ 424
Query: 372 HRTYAE 377
+R E
Sbjct: 425 NRILNE 430
>gi|192338748|gb|ACF04279.1| UDP-D-glucuronate carboxy-lyase [Eucalyptus grandis]
Length = 346
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 157/345 (45%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D + K L+ G R + I+H
Sbjct: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNFFTGTKENLK--KWIGHPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P P QD +Y+ + +P R Y K++ E L++
Sbjct: 148 SEVYGD------PLVHP--QDESYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 190
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E + R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 191 HRQHGIEIRVARIFNTYGPRMNIDDG---------RVVSNFIAQAVRGEPLTVQAPGTQT 241
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E L
Sbjct: 242 RSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMIELAETVKE----------LI 287
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V+++ E DD +R PD+T + LGW PK L + L
Sbjct: 288 NPDVEITMVE---NTPDDPRQRKPDITKAKELLGWEPKVKLRNGL 329
>gi|297816652|ref|XP_002876209.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297322047|gb|EFH52468.1| UDP-glucuronic acid decarboxylase 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 161/355 (45%), Gaps = 63/355 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL +K++ I+ + + + ++L+ S R +
Sbjct: 117 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFSNP---RFEL--- 170
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 171 -IRHDV-VEPILLEVDHIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFL 228
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KE +G++ +R Y K+ E
Sbjct: 229 LTSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGERSCYDEGKRTAE 269
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F +R+ P+
Sbjct: 270 TLAMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQTIRKHPMT 318
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D +E ++ ++E N H+ FN+GNP E T+ +LAE++ EV
Sbjct: 319 VYGDGKQTRSFQYVSDLVEGLVALME-----NDHVGPFNLGNP-GEFTMLELAEVVKEVI 372
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+P+ + EF DD KR PD++ + L W PK SL + L
Sbjct: 373 ----------DPSATI---EFKPNTADDPHKRKPDISKAKELLNWEPKISLREGL 414
>gi|224109544|ref|XP_002315231.1| predicted protein [Populus trichocarpa]
gi|118483816|gb|ABK93800.1| unknown [Populus trichocarpa]
gi|118485318|gb|ABK94518.1| unknown [Populus trichocarpa]
gi|222864271|gb|EEF01402.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 154/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++++ ++++ D Y K L+ G R + I+H
Sbjct: 35 ILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLK--KWIGHPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG DP + E +G++ R Y K++ E L++
Sbjct: 148 SEVYG---------------DPLIHPQNE----SYWGNVNPIGVRSCYDEGKRVAETLMF 188
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 189 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRNEPLTVQAPGT 239
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E
Sbjct: 240 QTRSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMIELAENVKE---------- 285
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V + S E DD +R PD+T + LGW PK L D L
Sbjct: 286 LINPEVKIISVE---NTPDDPRQRKPDITKAKELLGWEPKIKLRDGL 329
>gi|330468917|ref|YP_004406660.1| NAD-dependent epimerase/dehydratase [Verrucosispora maris
AB-18-032]
gi|328811888|gb|AEB46060.1| NAD-dependent epimerase/dehydratase [Verrucosispora maris
AB-18-032]
Length = 329
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 152/351 (43%), Gaps = 44/351 (12%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHD 80
+ G GF+GSHL E+++ + ++ D PE + + +++
Sbjct: 7 VVTGGCGFLGSHLVERLVAQG-DEVTVFDAAPPP------PEQRIARQHSRHVTGDVRDP 59
Query: 81 SRLEGLIKM-ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
L I+ D+ +LAA+ Y +RPLD I NF V++ +E R++ ST
Sbjct: 60 EALAAAIRPDVDVVYHLAAVVGVDQYLSRPLDVIDINFTGTRRVLERAAEVGARVVVAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EV+G+ +PA EDA + G RW+Y+ +K L E L +A
Sbjct: 120 SEVFGR--------------NPAV-PWAEDAER-VLGPTTADRWTYSTSKALAEHLTFAF 163
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++GL T+VR FN GPR P+ V R + N R P+ L DGG+
Sbjct: 164 VRQHGLAATVVRYFNAYGPRQR-------PAYVVSRTVHRVLNG---RSPV-LYDGGRQT 212
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F Y+ DA+ L + G FN+G+ E T M EV A + A
Sbjct: 213 RCFTYVDDAVTGTLAAAASADAV-GEAFNIGS-MTETT-------MAEVVAVILRLTAST 263
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P +V + + G Y+D +RIPD + L W+ T L D L + +
Sbjct: 264 VPVTEVDTAQRLGAAYEDLSRRIPDNAKARKVLNWSCDTPLEDGLRQLVAW 314
>gi|192288601|ref|YP_001989206.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
TIE-1]
gi|192282350|gb|ACE98730.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
TIE-1]
Length = 315
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 159/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC+K+L E H+IL +D Y I+HL+ G R +
Sbjct: 7 ILVSGGAGFIGSHLCDKLLAEG-HEILCVDNYFTGWRRNIEHLV------GTPRFEV--- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D+ NLA +P Y P+ T+ ++ A+ ++ ++
Sbjct: 57 -MRHDVTFPLYVEVDDI-YNLACPASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG D + P Y +G + R Y K+ E
Sbjct: 115 QASTSEVYG---------DPNVHPQPESY----------WGHVNPLGIRACYDEGKRAAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ ++ + R FN GPRM P++G RV++ F L + +
Sbjct: 156 TLFFDYHRQHKVKIKVGRIFNTYGPRMH-------PNDG--RVVSNFIVQALSGNDITIY 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D ++ ++ G + N+GNP E T+RQLAEM+ E+ S
Sbjct: 207 GDGSQTRSFCYVTDLLDGFARLMATGDEFIGPV-NLGNP-VEFTIRQLAEMVIEMTDSRS 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ P+ DD +R PD+++ ++LGW PK L D L+ T+ Y
Sbjct: 265 KLVMMPLPS-------------DDPRQRQPDISLARRELGWEPKVPLADGLKETIGY 308
>gi|254295548|ref|YP_003061570.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
gi|254044079|gb|ACT60873.1| NAD-dependent epimerase/dehydratase [Hirschia baltica ATCC 49814]
Length = 317
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 160/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD--VYNDK--IKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHL ++ LLE +++ LD DK I+HL G R +F R
Sbjct: 8 VLVSGGAGFLGSHLIDR-LLERGDEVICLDNLFTGDKRNIEHLF------GNPRFEFIRH 60
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ LE D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 61 DVCFPIYLE-----VDEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRIGAKIF 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KE+ +G++ R Y K+ E
Sbjct: 116 QASTSEVYG---------------DPNVHPQKEE----YWGNVNPIGIRSCYDEGKRCAE 156
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++GLE + R FN GPRM+ P +G RV++ F L+ + + L
Sbjct: 157 TLFFDYHRQHGLEIKVARIFNTYGPRMN-------PEDG--RVVSNFIMQALKGEDITLY 207
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y D +EA L +++ P +G I N+GNP E T++QLAE++ ++ S
Sbjct: 208 GDGLQTRSFCYRDDLVEAFLRIMDTPKEVSGPI-NIGNP-GEFTIKQLAELVVKLTNSSS 265
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L P DD +R PD++ L W PK L D L ST++Y
Sbjct: 266 KLIYLPLPQ-------------DDPMQRQPDISKAKSLLDWEPKVKLEDGLISTISY 309
>gi|389737505|ref|ZP_10190934.1| NAD-dependent epimerase/dehydratase [Rhodanobacter sp. 115]
gi|388434867|gb|EIL91795.1| NAD-dependent epimerase/dehydratase [Rhodanobacter sp. 115]
Length = 312
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 161/359 (44%), Gaps = 65/359 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN--- 76
+ + G GF+GSHLC+++L + H +L +D + TG+ R H LN
Sbjct: 4 VLVTGGAGFLGSHLCDRLLADG-HDVLCVDNFF------------TGSKRNVAHLLNHPY 50
Query: 77 ---IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
++HD +++ D NLA +P Y P+ T ++ A+ ++ R
Sbjct: 51 FELMRHDVTFPLYVEV-DRIFNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRVKAR 109
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQL 191
++ ST EVYG P+ P Q Y+ G + R Y K+
Sbjct: 110 ILQASTSEVYGD------PEVHP--QTEGYW-----------GKVNPIGIRSCYDEGKRC 150
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + ++ L+ +VR FN GPRM P++G RV++ F L+ + +
Sbjct: 151 AETLFFDYHRQHDLDVKVVRIFNTYGPRMH-------PNDG--RVVSNFIVQALKGEDIT 201
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
+ G R+F Y+ D IEA + M+ + G + N+GNP E T+ QLAE V A
Sbjct: 202 IYGDGSQTRSFCYVDDLIEAFIRMMASERGFTGPV-NIGNP-VEHTMLQLAE---RVIAL 256
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V G++ L F DD +R PD+++ +LGW PK +L D L T+ Y
Sbjct: 257 VGGKSKLV----------FRPLPADDPRQRQPDISLAQSKLGWQPKVALDDGLRETIAY 305
>gi|145294730|ref|YP_001137551.1| hypothetical protein cgR_0678 [Corynebacterium glutamicum R]
gi|417969787|ref|ZP_12610723.1| hypothetical protein CgS9114_02088 [Corynebacterium glutamicum
S9114]
gi|140844650|dbj|BAF53649.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045891|gb|EGV41560.1| hypothetical protein CgS9114_02088 [Corynebacterium glutamicum
S9114]
Length = 317
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 160/366 (43%), Gaps = 57/366 (15%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GF+GSHL + IL + I+ D+ + +L Q R+Q ++++
Sbjct: 3 CVITGGAGFLGSHLTDLILNQGHEVIVLDDLSTGSLSNLFH---QISNPRLQIKTVDVRK 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
++G + D+ NLA+ +P Y R ++ + N L V ++ E RL+ ST
Sbjct: 60 KFEIDGPV---DIVFNLASPASPPVYTQRRVECLLINSEAVLQVAEFALEKGARLVQAST 116
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG DP + E +G++ +R Y K+ E L+
Sbjct: 117 SEVYG---------------DPLSHPQLEHH----WGNVNPIGERSCYDEGKRFAEALLS 157
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A E GL I+R FN GPRM P +G RV++ F L +PL + G
Sbjct: 158 AMRLEQGLNAGIIRIFNTYGPRMH-------PFDG--RVISGFVRQALANEPLTVFGDGS 208
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D + + LM + G I N+GNP E TV +A +
Sbjct: 209 QTRSFCYVSDLVRGLWLM--GNSNQPGPI-NLGNPI-EQTVLSMAHL------------- 251
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ---HRT 374
++E T SS F DD +R PD++ + LGW P + L + +Q RT
Sbjct: 252 IKESTNSESSITFEPLPSDDPVRRRPDISKAKELLGWEPLVGIDVGLREVINWQIETQRT 311
Query: 375 YAEAIK 380
YAE I
Sbjct: 312 YAEKIS 317
>gi|171318696|ref|ZP_02907839.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5]
gi|171096102|gb|EDT41028.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MEX-5]
Length = 316
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 153/351 (43%), Gaps = 49/351 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE+ L+E H +L +D Y K + + G R + ++H
Sbjct: 8 ILVTGGAGFLGSHLCER-LVELGHDVLCVDNYFTGTKQNVA--ALLGNPRFE----ALRH 60
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +++ D NLA +P Y P+ T ++ + A+ ++ + R++ ST
Sbjct: 61 DVTFPLYVEV-DEIYNLACPASPIHYQFDPVQTTKTSVMGAINMLGLAKRTHARVLQTST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG D + P Y + + +P R Y K+ E L +
Sbjct: 120 SEVYG---------DPDVHPQPESY--RGNVNPL------GPRACYDEGKRCAETLFFDY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ + +VR FN GPRM P++G RV++ F LR + + L G
Sbjct: 163 HRQQNVRIKVVRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGENITLYGDGSQT 213
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F Y+ D ++ ++ M+ +PA G I N+GNPH E+ + +LA+++ + S
Sbjct: 214 RAFCYVDDMVDGLIRMMASPADLTGPI-NLGNPH-EIAISELAQIVLRLTGSTSRLVFRP 271
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ + L W P L L T+ Y
Sbjct: 272 LPK-------------DDPTQRCPDIGLARAHLDWAPTVGLEAGLRRTIDY 309
>gi|225437374|ref|XP_002268787.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Vitis
vinifera]
Length = 444
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 157/350 (44%), Gaps = 61/350 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL ++++ I+ + + + ++++ G R +
Sbjct: 117 KGLRIVVTGGAGFVGSHLVDRLIRRGDSVIVVDNFFTGRKENVMH---HFGNPRFEL--- 170
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E L+ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 171 -IRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 228
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG PL Q P + +P R Y K+ E L
Sbjct: 229 LTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKRTAETL 271
Query: 196 I--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
Y GAE +E I R FN GPRM G RV++ F LR++PL +
Sbjct: 272 TMDYHRGAE--VEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLTVY 320
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAK 311
G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++ E
Sbjct: 321 GDGKQTRSFQYVSDLVEGLIRLMEGE-----HVGPFNLGNP-GEFTMLELAQVVQE---- 370
Query: 312 VSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
T+D ++K EF DD KR PD++ LGW PK +L
Sbjct: 371 ----------TIDPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPKVAL 410
>gi|83814755|ref|YP_444740.1| UDP-glucuronate decarboxylase [Salinibacter ruber DSM 13855]
gi|83756149|gb|ABC44262.1| UDP-glucuronate decarboxylase [Salinibacter ruber DSM 13855]
Length = 322
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 154/356 (43%), Gaps = 61/356 (17%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
+ G GF+GSHLC++ L+E H ++ +D + I+HL E G DR +F ++
Sbjct: 6 ITGGAGFLGSHLCDR-LIEEGHSVVCMDNLITGDTENIEHLFE----LGQDRFRFVEYDV 60
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+ G + D ++ A+ P DY P+ T+ + + + RL+
Sbjct: 61 TDYLHVGGEL---DYVLHFASPAAPDDYLQYPIQTLKVGALGTHKALGLAKAKDARLLLA 117
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERL 195
ST EVYG DP + ED +G++ +R Y AK+ E L
Sbjct: 118 STSEVYG---------------DPLVHPQPED----YWGNVNPIGERGVYDEAKRFGEAL 158
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +G+E I R FN GPRM G R L F LR +PL +
Sbjct: 159 AMAYHRYHGVETRIARIFNTYGPRMRVDDG---------RALPTFMGQALRGEPLTVYGD 209
Query: 256 GQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R F Y+ D +E + L++ + A N+GNP +E+T+++ AE + EV S
Sbjct: 210 GSQTRAFCYVDDLVEGLYRLLMSDWAEP----VNLGNP-DEITIKEFAEEIIEVTG--SD 262
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
EP + DD R PD++ + LGW P+ + LE TL Y
Sbjct: 263 SDITYEPLPE-----------DDPQVRQPDISRAKEVLGWAPEVDRREGLERTLEY 307
>gi|402490902|ref|ZP_10837691.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
gi|401810928|gb|EJT03301.1| NAD-dependent epimerase/dehydratase [Rhizobium sp. CCGE 510]
Length = 323
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 155/365 (42%), Gaps = 49/365 (13%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
T + G GF+GSHLCE LL+ H ++ LD ++ + ++ + R+ ++
Sbjct: 7 TALVNGGAGFVGSHLCET-LLQRGHSVICLDNFSTGRRVNVDHLASNARFRM------VE 59
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
HD R I+ A L N A+ +P DY P+ T+ +N + A+ + + ++ S
Sbjct: 60 HDVRQPFDIE-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDCARKTGAIVVQSS 118
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P SP Q +Y P R Y K+ E L +
Sbjct: 119 TSEVYGD------PSQSP--QHESYCGNVNPIGP---------RACYDEGKRSAETLFFD 161
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
G++ + R FN GPRM G RV++ F LR L + GQ
Sbjct: 162 YHRTYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNADLTIYGDGQQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+F Y+ D +E L +G I N+GNP E+TVR+LAE++ ++ S L
Sbjct: 213 TRSFCYVDDLVEGFLRFSAAGNACHGPI-NLGNPA-EITVRRLAEIIRDLTNSRSRIIHL 270
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378
T DD +R PD++ LGW P+ L L T+ Y AE
Sbjct: 271 PAVT-------------DDPRQRRPDISRALADLGWQPRVGLEAGLARTVDYFDGLLAET 317
Query: 379 IKQAV 383
K V
Sbjct: 318 EKAEV 322
>gi|172059227|ref|YP_001806879.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MC40-6]
gi|171991744|gb|ACB62663.1| NAD-dependent epimerase/dehydratase [Burkholderia ambifaria MC40-6]
Length = 313
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 158/356 (44%), Gaps = 58/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
++ + G GF+GSHLCE+ L+ + ++ +D ++ I+HL+ R+ F
Sbjct: 5 SVLVTGGAGFLGSHLCER-LVHAGYDVMCVDNFHTGSKRNIEHLI--------GRVNFE- 54
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD L L AD N+A +P Y + P+ T+ + + A+ ++ R+
Sbjct: 55 -VIRHDVWLP-LYVEADRVFNMACPASPVHYQSDPVSTVKTAVLGAINMLGLAKRCGARI 112
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG +Q P + +P R Y K+ E
Sbjct: 113 LQASTSEVYGDA-----------QQHPQQESYWGNVNP------NGLRACYDEGKRCAET 155
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++ ++ +VR FN GPRM G RV++ F LR +P+ L
Sbjct: 156 LFFDYHRQHRVDIRVVRIFNTYGPRMRADDG---------RVVSNFIMQALRGEPITLYG 206
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D +E +L M++ N+GNP +E+T+R+LAE + +
Sbjct: 207 DGSQTRSFCYVDDLVEGLLRMMDQDDDTGP--INLGNP-SEITIRELAECVLRL------ 257
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S E+ DD +R PD+ Q+L W P +L D L+ T+ +
Sbjct: 258 -------TGSKSRIEYRPLPADDPLQRRPDIGRARQRLDWQPGIALEDGLKETIAH 306
>gi|308811703|ref|XP_003083159.1| GDP-mannose 4,6 dehydratase (ISS) [Ostreococcus tauri]
gi|116055038|emb|CAL57434.1| GDP-mannose 4,6 dehydratase (ISS) [Ostreococcus tauri]
Length = 416
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 159/352 (45%), Gaps = 64/352 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHL ++++ I+A + + + + HL P F L
Sbjct: 86 VLVTGGAGFVGSHLVDRLMERGNIVIVADNFFTGRKENIMHHLQNP----------FFEL 135
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI ++ + L ++ R++
Sbjct: 136 -IRHDV-VEPMLVEVDQIYHLACPASPVHYKHNPVKTIKTSVMGTLNMLGLAKRVGARML 193
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KE +G++ R Y K++ E
Sbjct: 194 LTSTSEVYG---------------DPLEHPQKE----SYWGNVNPIGVRSCYDEGKRVAE 234
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + + G++ I R FN GPRM G RV++ F + LR +PL +
Sbjct: 235 TLCFDYHRQEGVDIRIARIFNTYGPRMALEDG---------RVVSNFVSQALRGEPLTVY 285
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G+ R+F Y+ D + ++ +++N N+GNP E T+ +LAE++ EV
Sbjct: 286 GDGKQTRSFQYVDDLVAGLMALMDNENEIGP--VNIGNP-GEFTMLELAEVVKEV----- 337
Query: 314 GEAALEEPTVDVSSKEFYGEGY-DDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
VD ++K Y E DD +R PD+T+ + LGW PK +L + L
Sbjct: 338 ---------VDKNAKIEYKENTADDPGRRRPDITLAKKTLGWEPKVTLREGL 380
>gi|48093467|gb|AAT40110.1| putative UDP-glucuronate decarboxylase 4 [Nicotiana tabacum]
Length = 409
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 159/355 (44%), Gaps = 63/355 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL +K++ I+ + + + ++++ G R +
Sbjct: 92 KRMRIVVTGGAGFVGSHLVDKLIKRGDDVIVIDNFFTGRKENVMH---HFGNHRFEL--- 145
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 146 -IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFL 203
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DP + KE +G + R Y K+ E
Sbjct: 204 LTSTSEVYG---------------DPLEHPQKE----TYWGHVNPIGVRSCYDEGKRTAE 244
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F + +RRQP+
Sbjct: 245 TLTMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVSQAIRRQPMT 293
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D ++ ++ ++E HI FN+GNP E T+ +LAE++ EV
Sbjct: 294 VYGDGKQTRSFQYVSDLVDGLMALMEGE-----HIGPFNLGNP-GEFTMLELAEVVKEVI 347
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+P+ + EF DD KR PD++ + L W PK L + L
Sbjct: 348 ----------DPSATI---EFRANTADDPHKRKPDISKAKELLNWEPKVPLREGL 389
>gi|115436236|ref|NP_001042876.1| Os01g0315800 [Oryza sativa Japonica Group]
gi|45421832|dbj|BAD12490.1| UDP-glucuronic acid decarboxylase [Oryza sativa Japonica Group]
gi|52075812|dbj|BAD45292.1| UDP-glucuronic acid decarboxylase [Oryza sativa Japonica Group]
gi|113532407|dbj|BAF04790.1| Os01g0315800 [Oryza sativa Japonica Group]
gi|215715189|dbj|BAG94940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 171/387 (44%), Gaps = 75/387 (19%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-----NDKIK 56
AG V L L R ++ + + G GF+GSHL ++ L+E ++ +D + ++
Sbjct: 100 AGGKVPLGLRRRALR---VLVTGGAGFVGSHLVDR-LVERGDSVIVVDNFFTGRKDNVAH 155
Query: 57 HLLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSN 116
HL P + I+HD +E ++ D +LA +P Y P+ TI +N
Sbjct: 156 HLANPRFEV-----------IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPIKTIKTN 203
Query: 117 FIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176
+ L ++ + + ST EVYG PL Q P + +P
Sbjct: 204 VVGTLNMLGLAKRIGAKFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI--- 249
Query: 177 SIEKQRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP 234
R Y K+ E L Y GA LE I R FN GPRM G
Sbjct: 250 ---GVRSCYDEGKRTAETLTMDYHRGAN--LEVRIARIFNTYGPRMCIDDG--------- 295
Query: 235 RVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNP 292
RV++ F LR++PL + G+ R+F Y+ D +E ++ ++E HI FN+GNP
Sbjct: 296 RVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMSLMEGE-----HIGPFNLGNP 350
Query: 293 HNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQ 351
E T+ +LA+++ + T+D +++ EF DD KR PD+T +
Sbjct: 351 -GEFTMLELAKVVQD--------------TIDPNARIEFRPNTADDPHKRKPDITRAKEL 395
Query: 352 LGWNPKTSLWDLLESTLT-YQHRTYAE 377
LGW PK L + L +T ++ R + +
Sbjct: 396 LGWEPKVPLREGLPLMVTDFRKRIFGD 422
>gi|11121508|emb|CAC14890.1| d-TDP-glucose dehydratase [Phragmites australis]
Length = 350
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 155/345 (44%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ H+++ D + K L + G R + I+H
Sbjct: 37 ILVTGGAGFIGSHLVDKLMENEKHEVIVADNFFTGSKDNL--KKWIGHPRFEL----IRH 90
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D L+++ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 91 DVTQPLLVEV-DQIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 149
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q AY+ + +P R Y K++ E L++
Sbjct: 150 SEVYGD------PLEHP--QTEAYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 192
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R PL + G
Sbjct: 193 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAVRGDPLTVQKPGTQT 243
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ ++ N N+GNP E T+ +LAE + E L
Sbjct: 244 RSFCYVADMVDGLIKLMNG---NNTGPINLGNP-GEFTMLELAEKVKE----------LI 289
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V V+ E DD +R PD+T + LGW PK L D L
Sbjct: 290 NPEVTVTMTE---NTPDDPRQRKPDITKAKEVLGWEPKVVLRDGL 331
>gi|212722706|ref|NP_001132037.1| uncharacterized protein LOC100193447 [Zea mays]
gi|194693266|gb|ACF80717.1| unknown [Zea mays]
gi|413956158|gb|AFW88807.1| UDP-glucuronic acid decarboxylase 1 isoform 1 [Zea mays]
gi|413956159|gb|AFW88808.1| UDP-glucuronic acid decarboxylase 1 isoform 2 [Zea mays]
Length = 350
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/345 (29%), Positives = 156/345 (45%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ H+++ D + K L + G R + I+H
Sbjct: 37 ILVTGGAGFIGSHLVDKLMENEKHEVIVADNFFTGSKDNL--KKWIGHPRFEL----IRH 90
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 91 DV-TEPLLVEVDQIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 149
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q AY+ + +P R Y K++ E L++
Sbjct: 150 SEVYGD------PLEHP--QTEAYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 192
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 193 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAVRGEPLTVQRPGTQT 243
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ ++ G I N+GNP E T+ +LAE + E L
Sbjct: 244 RSFCYVADMVDGLIKLMN--GNKTGPI-NLGNP-GEFTMLELAENVKE----------LI 289
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V V+ E DD +R PD+T + LGW PK L D L
Sbjct: 290 NPDVTVTMTE---NTPDDPRQRKPDITKAKEVLGWEPKIVLRDGL 331
>gi|357125775|ref|XP_003564565.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Brachypodium
distachyon]
Length = 408
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 153/358 (42%), Gaps = 61/358 (17%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76
P + + G GF+GSHL ++ LLE ++ +D + + A ++ R
Sbjct: 98 PRRVVVTGGAGFVGSHLVDR-LLEQGDSVIVVD-------NFFTGRKENVAHHLRNPRFE 149
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 150 LLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL 209
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIER 194
ST EVYG DP + KE +G + R Y K+ E
Sbjct: 210 TSTSEVYG---------------DPLEHPQKE----TYWGHVNPIGVRSCYDEGKRTAET 250
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L G+ I R FN GPRM G RV++ F LRRQP+ +
Sbjct: 251 LTMDYHRGGGVAVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRRQPMTVYG 301
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAKV 312
G+ R+F Y+ D + ++ ++E + HI FN+GNP E T+ +LAE++ +
Sbjct: 302 DGKQTRSFQYVSDLVAGLMALME-----SDHIGPFNLGNP-GEFTMLELAEVVKQ----- 350
Query: 313 SGEAALEEPTVD-VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
T+D +S+ EF DD R PD+T Q LGW PK SL + L +T
Sbjct: 351 ---------TIDPMSTIEFKPNTADDPHMRKPDITKAKQLLGWEPKVSLKEGLPLMVT 399
>gi|187927054|ref|YP_001893399.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12J]
gi|241665383|ref|YP_002983742.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12D]
gi|187728808|gb|ACD29972.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12J]
gi|240867410|gb|ACS65070.1| NAD-dependent epimerase/dehydratase [Ralstonia pickettii 12D]
Length = 340
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 164/372 (44%), Gaps = 63/372 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLL-EPESQTGADRIQFHR 74
+ + G GF+GSHLC++ LL H +L +D + I HLL P +
Sbjct: 25 VLVTGGAGFLGSHLCDR-LLRDGHDVLCVDNFYTGTKRNIAHLLSHPRFEV--------- 74
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD +++ D+ NLA +P Y P+ T ++ A+ ++ R+
Sbjct: 75 --LRHDVTFPLYVEVDDI-YNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVGARI 131
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLI 192
+ ST EVYG P P Q AY+ G++ R Y K+
Sbjct: 132 LQASTSEVYGD------PHQHP--QTEAYW-----------GNVNPIGVRSCYDEGKRCA 172
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L ++GL+ + R FN GPRM P++G RV++ F L +P+ L
Sbjct: 173 ETLFMDYRRQHGLDVKVARIFNTYGPRMH-------PNDG--RVVSNFIMQALAGEPITL 223
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G R F Y+ D I+A++ ++ PA G + N+GNPH E+++ +A +
Sbjct: 224 YGDGLQTRAFCYVDDLIDALVRLMNTPADFAGPV-NLGNPH-EMSMLDIARQIVTC---- 277
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
T S+ F+ DD +R PD+T+ +LGW P T+L L T+ Y
Sbjct: 278 ---------TRSNSALVFHPLPQDDPTQRCPDITLARDKLGWEPHTALEVGLARTVAYFR 328
Query: 373 RTYAEAIKQAVA 384
+ + A + +A
Sbjct: 329 QQFFLAPQPVMA 340
>gi|408786770|ref|ZP_11198505.1| dTDP-glucose 4-6-dehydratase [Rhizobium lupini HPC(L)]
gi|408487241|gb|EKJ95560.1| dTDP-glucose 4-6-dehydratase [Rhizobium lupini HPC(L)]
Length = 340
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 66/371 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ LL + H+++ LD + ++HL R L
Sbjct: 25 VLVNGGAGFLGSHLCER-LLSSGHEVICLDDLSTGRTANVEHL----------RNNKRFL 73
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD R I ++ L N A+ +P DY P+ T+ +N + A+ V++ ++
Sbjct: 74 MVEHDVRKPYDIDVS-LIFNFASPASPPDYQRDPVGTLLTNVLGAVNVLEVARRCGATVV 132
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG D + P Y FG++ R Y K+ E
Sbjct: 133 QSSTSEVYG---------DPHVNPQPETY----------FGNVNTIGPRACYDEGKRSAE 173
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + G++ + R FN GPRM P +G RV++ F L+ + +
Sbjct: 174 TLFFDYHRTFGVDIKVGRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGDDITIY 224
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D I+ L P G I N+GNP E+ VRQLA+++ + S
Sbjct: 225 GDGSQTRSFCYVDDLIDGFLRFSAKPKDCTGPI-NLGNP-TEIPVRQLADIVIRMTGSRS 282
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY--- 370
L DD +R PD++ N+ L W P+ L LE T+ Y
Sbjct: 283 RIVHLP-------------AAIDDPQQRRPDISRANELLKWQPRVPLEIGLERTIVYFDA 329
Query: 371 --QHRTYAEAI 379
R AEA+
Sbjct: 330 LLAGRKVAEAV 340
>gi|406707305|ref|YP_006757657.1| NAD dependent epimerase/dehydratase family protein [alpha
proteobacterium HIMB59]
gi|406653081|gb|AFS48480.1| NAD dependent epimerase/dehydratase family protein [alpha
proteobacterium HIMB59]
Length = 310
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 158/355 (44%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCEK LL + + IL +D Y I HLL D F L
Sbjct: 4 ILITGGSGFLGSHLCEK-LLNSKNHILCVDNYFTSSKKNISHLL--------DFPNFEIL 54
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD L D NLA +P Y P+ T+ N + A+ ++ ++
Sbjct: 55 --RHDITFP-LYAEVDEIYNLACPASPIHYQKDPVQTLKVNIMGAVNMLGLAKRTKAKIF 111
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG PK SP +++ Y+ + +P R Y K+ E L
Sbjct: 112 QASTSEVYGD------PKVSPQKEN--YW---GNVNPIGI------RSCYDEGKRAAEAL 154
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++ + + R FN GPRM G RV++ F L+ +P+ +
Sbjct: 155 FFDYHRQHKIPIKVGRIFNTYGPRMSVNDG---------RVVSNFIVQCLKNKPITIYGD 205
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F ++ D I+ + ++ + G I N+GNP NE+T+ Q+A + E+ S
Sbjct: 206 GSQTRSFCFVDDLIDGIFKLMNSKKSIIGPI-NLGNP-NEITIIQIASTIKEIIGSKSKI 263
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ + P+ DD +R PD+T+ + L W P +L + L+ T++Y
Sbjct: 264 SYKKLPS-------------DDPMQRRPDITLAKKTLNWKPVVNLENGLKKTISY 305
>gi|406831581|ref|ZP_11091175.1| UDP-glucuronate decarboxylase [Schlesneria paludicola DSM 18645]
Length = 311
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 161/359 (44%), Gaps = 63/359 (17%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
+I + G GF+GSHLC++ LLE ++ LD + I HL+ G R + R
Sbjct: 3 SILVTGGAGFLGSHLCDR-LLERGDNVICLDNFFTGRKQNILHLI------GNPRFELLR 55
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I +E ++ D NLA +P Y P+ TI ++ + + ++ R+
Sbjct: 56 HDI-----VEPIVLEIDQVYNLACPASPVAYQFNPIKTIKTSTVGVVNLLGLAKRCKARI 110
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLI 192
+H ST EVYG DP + E+ +G++ R Y K++
Sbjct: 111 LHCSTSEVYG---------------DPTVHPQSEE----YWGNVNPIGPRSCYDEGKRVA 151
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L E+ L+ I+R FN GPRMD P++G RV++ F LR +PL +
Sbjct: 152 ESLCVNYHQEHQLQVRIIRIFNTYGPRMD-------PNDG--RVISNFIMQALRGEPLTI 202
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLA-EMMTEVYAK 311
G R+F Y D I ++L+++ + G I NVGNP E ++ +LA E++ +
Sbjct: 203 YGDGTQTRSFCYCDDLIRGMMLLMDQ-DQTIGPI-NVGNP-GEYSMLELAQEVLRAIPES 259
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S + PT DD +R PD+T LGW+P L L T+ Y
Sbjct: 260 KSTIKHVPLPT-------------DDPKQRCPDITKAKSILGWSPTVDLRTGLAKTIEY 305
>gi|268317410|ref|YP_003291129.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252]
gi|262334944|gb|ACY48741.1| NAD-dependent epimerase/dehydratase [Rhodothermus marinus DSM 4252]
Length = 318
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 153/363 (42%), Gaps = 65/363 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQ 71
+P + G GFIGSHLCE+ L E H+++ +D + D I HL+ G +R
Sbjct: 3 RPPRTLITGGAGFIGSHLCERFLAEG-HEVICMDNFITGSPDNIAHLI------GHERFH 55
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
F ++ + +EG + D ++ A+ +P DY P+ T+ + +
Sbjct: 56 FIHHDVTNFIYVEGPL---DYVLHFASPASPVDYLKYPIQTLKVGALGTHKALGLAKAKG 112
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAK 189
R + ST EVYG DP + ED +G++ R Y AK
Sbjct: 113 ARFLLASTSEVYG---------------DPLVHPQPED----YWGNVNPVGLRGVYDEAK 153
Query: 190 QLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
+ E + A +G++ IVR FN GPRM G R L F L+ +P
Sbjct: 154 RFAEAMTMAYHRYHGVDVRIVRIFNSYGPRMRLDDG---------RALPTFMTQALKGEP 204
Query: 250 LKLVDGGQSQRTFIYIKDAIEAV--LLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTE 307
+ + G R+F YI D +E + LLM + N +GNP E+++ + A+ + E
Sbjct: 205 ITVYGDGSQTRSFQYIDDLVEGIYRLLMSDYVGPVN-----IGNP-EEISILEFAKEIIE 258
Query: 308 VYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLEST 367
+ S P DD R PD+++ + LGW PK S + L T
Sbjct: 259 LTGSKSEIVFKPLPA-------------DDPKVRQPDISLARRVLGWEPKVSRREGLRRT 305
Query: 368 LTY 370
L Y
Sbjct: 306 LEY 308
>gi|89067499|ref|ZP_01155012.1| dTDP-glucose 4,6-dehydratase protein [Oceanicola granulosus
HTCC2516]
gi|89047068|gb|EAR53122.1| dTDP-glucose 4,6-dehydratase protein [Oceanicola granulosus
HTCC2516]
Length = 338
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 158/375 (42%), Gaps = 58/375 (15%)
Query: 10 LDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADR 69
+D P+ P TI + G GFIGSHLC LLE H+++ALD Y +H
Sbjct: 1 MDMTPL-PRTILVAGGAGFIGSHLCAA-LLEEGHRVIALDSYQTGTRH--------NVAG 50
Query: 70 IQFHRLNIKHDSRLEGLIKMA---DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKY 126
+ HR D +E L ++ D NLA+ +P Y P+ T+ +N + ++
Sbjct: 51 LLGHRNFRLIDGEVETLPPISGRIDRIYNLASPASPPAYQADPVRTMMTNVVGTNNLLAL 110
Query: 127 CSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYA 186
RL+ ST EVYG DP + E + + S R Y
Sbjct: 111 AEAKGARLLQASTSEVYG---------------DPEVHPQPEGYTGHV--SCTGPRACYD 153
Query: 187 CAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLR 246
K+ E L Y + + R FN GP M G R+++ L
Sbjct: 154 EGKRAAEALCYDYLRAGRTDVRVARIFNTYGPNMQCDDG---------RIVSNLICQALS 204
Query: 247 RQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMT 306
+P+ + GQ R+F Y+ D + ++ ++E P + + N+GNP E T+ LAE++
Sbjct: 205 DEPMTIYGTGQQTRSFCYVADMVAGLMALMEVPETPDAPV-NIGNP-GEFTILDLAELIR 262
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
+ PT + F DD +R PD++ LGW P+ L L+
Sbjct: 263 SMV-----------PT--SAHPVFRPLPKDDPQRRRPDISRAKALLGWEPRVPLEQGLKE 309
Query: 367 TLTYQHRTYAEAIKQ 381
T+ Y +AEA+++
Sbjct: 310 TIPY----FAEALQR 320
>gi|423421396|ref|ZP_17398485.1| hypothetical protein IE3_04868 [Bacillus cereus BAG3X2-1]
gi|401098562|gb|EJQ06574.1| hypothetical protein IE3_04868 [Bacillus cereus BAG3X2-1]
Length = 321
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 164/353 (46%), Gaps = 46/353 (13%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y KIK+ E + ++ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKIKYHDELMKE-----VRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R F Y+ DA+EA + M EN NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDEN---VNGEIINIGS-ENEKSIKEVAEVIKKLTNSSS---- 264
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + + L+ T+ +
Sbjct: 265 ---KIVQVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQATVTWEQGLKETIKW 314
>gi|424916157|ref|ZP_18339521.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392852333|gb|EJB04854.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 340
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 154/366 (42%), Gaps = 57/366 (15%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
T + G GF+GSHLCE+ LL+ H+++ LD ++ + HL R Q
Sbjct: 24 TALVNGGAGFLGSHLCER-LLQRGHRVICLDNFSTGRRVNVDHLASNA------RFQL-- 74
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD R I+ A L N A+ +P DY P+ T+ +N + A+ + + +
Sbjct: 75 --VEHDVRQPFDIE-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDCARKTGAVV 131
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P SP Q +Y P R Y K+ E
Sbjct: 132 VQSSTSEVYGD------PNQSP--QQESYCGNVNPIGP---------RACYDEGKRSAET 174
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + G++ + R FN GPRM G RV++ F LR L +
Sbjct: 175 LFFDYHRTYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNADLTIYG 225
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GQ R+F Y+ D +E L +G I N+GNP E+TVR+LAE++ ++ S
Sbjct: 226 DGQQTRSFCYVDDLVEGFLRFSAAGDACHGPI-NLGNPA-EITVRRLAEIVRDLTNSRSQ 283
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
L T DD +R PD++ LGW P L L T+ Y
Sbjct: 284 IVHLPAVT-------------DDPRQRRPDISRAMADLGWQPCIGLETGLARTVDYFDGL 330
Query: 375 YAEAIK 380
A A K
Sbjct: 331 LAGAKK 336
>gi|456864733|gb|EMF83125.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira weilii serovar Topaz str. LT2116]
Length = 312
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 160/351 (45%), Gaps = 50/351 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHLCE++L E I +++ + K++ + + +F R +I
Sbjct: 6 ILITGGAGFIGSHLCERLLKEGNEIICLDNLHTGRKKNI---QKLLNDPKFEFIRHDITD 62
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+LE D N+A +P Y + + TI +N + + ++ R++ ST
Sbjct: 63 PIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVKARILQAST 117
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q Y+ + +P R Y K++ E L +
Sbjct: 118 SEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAETLCFDY 160
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ ++ ++R FN GPRM P +G RV++ F L+++ + L G+
Sbjct: 161 QRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKEDITLYGEGEQT 211
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 212 RSFCYVDDLVDGIIRMM-NTENFNGPV-NLGN-DGEFTVRELAELVLKETGSASKIVHKP 268
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ QQLG+ PK L + + T+ Y
Sbjct: 269 LPQ-------------DDPARRKPDLTLAKQQLGFEPKVPLVEGIRKTIEY 306
>gi|209551572|ref|YP_002283489.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537328|gb|ACI57263.1| NAD-dependent epimerase/dehydratase [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 340
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 151/356 (42%), Gaps = 57/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
T + G GF+GSHLCE+ LL+ H+++ LD ++ + HL R Q
Sbjct: 24 TALVNGGAGFLGSHLCER-LLQRGHRVICLDNFSTGRRVNVDHLASNA------RFQL-- 74
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD R I+ A L N A+ +P DY P+ T+ +N + A+ + + +
Sbjct: 75 --VEHDVRQPFDIE-ASLIFNFASPASPPDYQRDPVGTLLTNVLGAVNTLDCARKTGAVV 131
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P SP Q +Y P R Y K+ E
Sbjct: 132 VQSSTSEVYGD------PNQSP--QQESYCGNVNPIGP---------RACYDEGKRSAET 174
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + G++ + R FN GPRM G RV++ F LR L +
Sbjct: 175 LFFDYHRTYGVDIKVGRIFNTYGPRMRLDDG---------RVVSNFIVQALRNADLTIYG 225
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
GQ R+F Y+ D +E L +G I N+GNP E+TVR+LAE++ ++ S
Sbjct: 226 DGQQTRSFCYVDDLVEGFLRFSAAGDACHGPI-NLGNPA-EITVRRLAEIVRDLTNSRSQ 283
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L T DD +R PD++ LGW P L L T+ Y
Sbjct: 284 IVHLPAVT-------------DDPRQRRPDISRAMADLGWQPCIGLETGLARTVDY 326
>gi|221632846|ref|YP_002522068.1| UDP-glucuronate decarboxylase [Thermomicrobium roseum DSM 5159]
gi|221157207|gb|ACM06334.1| UDP-glucuronate decarboxylase [Thermomicrobium roseum DSM 5159]
Length = 317
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 162/365 (44%), Gaps = 61/365 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLCE +LL+ ++++A+D I+HLL F R
Sbjct: 3 ILVTGGAGFIGSHLCESLLLDG-YQVIAVDSLLTGRLGNIRHLLTH---------PFFRF 52
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+ D +G+ AD +LA+ +P Y P++T+ N + +++ R +
Sbjct: 53 -IEQDV-TQGIDIEADAIFHLASPASPVGYRQYPIETLLVNSVGTYHLLELARRVRARFV 110
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + +ED FG++ R Y K+ E
Sbjct: 111 FASTSEVYG---------------DPLIHPQRED----YFGNVNPIGPRSCYDEGKRFGE 151
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L G++ I R FN GPRMD P++G RV+ F + L +P+++
Sbjct: 152 ALTMEFVRSFGVDARIARIFNTYGPRMD-------PADG--RVVPNFIVHALTGEPIEIF 202
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+ YI D + + L++E A G + N+GNP +E T+ +LA ++ E+
Sbjct: 203 GDGMQTRSLCYISDMVRGLRLLMERDGLA-GTVINLGNP-DERTILELAYLVRELTGN-- 258
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P V ++ DD +R PD++ LGW P+ + + L T+ Y
Sbjct: 259 -----PVPIVFRPARP------DDPGRRCPDISRARAVLGWEPRVPVEEGLRMTIDYFQD 307
Query: 374 TYAEA 378
A A
Sbjct: 308 VLARA 312
>gi|218192543|gb|EEC74970.1| hypothetical protein OsI_10996 [Oryza sativa Indica Group]
Length = 423
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 155/345 (44%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ H+++ D + K L + G R + I+H
Sbjct: 110 ILVTGGAGFIGSHLVDKLMENEKHEVIVADNFFTGSKDNL--KKWIGHPRFEL----IRH 163
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D L+++ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 164 DVTQPLLVEV-DQIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 222
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q AY+ + +P R Y K++ E L++
Sbjct: 223 SEVYGD------PLEHP--QTEAYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 265
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 266 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAVRGEPLTVQKPGTQT 316
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D + ++ ++ N N+GNP E T+ +LAE + E L
Sbjct: 317 RSFCYVADMVNGLIKLMNGD---NTGPINLGNP-GEFTMLELAENVKE----------LI 362
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V V+ E DD +R PD+T + LGW PK L D L
Sbjct: 363 NPEVTVTMTE---NTPDDPRQRKPDITKAKEVLGWEPKIVLRDGL 404
>gi|423393109|ref|ZP_17370335.1| hypothetical protein ICG_04957 [Bacillus cereus BAG1X1-3]
gi|401632142|gb|EJS49931.1| hypothetical protein ICG_04957 [Bacillus cereus BAG1X1-3]
Length = 321
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 163/353 (46%), Gaps = 46/353 (13%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y KIK+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKIKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R F Y+ DA+EA + M EN NG I N+G+ NE ++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMGEN---VNGEIINIGS-ENEKNIKEVAEVIKKLTDSSS---- 264
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + + L+ T+ +
Sbjct: 265 ---KIVQVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQATVTWEQGLKETIKW 314
>gi|365888699|ref|ZP_09427446.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp.
STM 3809]
gi|365335648|emb|CCD99977.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp.
STM 3809]
Length = 350
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 155/356 (43%), Gaps = 65/356 (18%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN---IKHD 80
G GFIGSH+C+ +L + +++ ++++ R + N I+HD
Sbjct: 19 GGAGFIGSHICDTLLRRGDTVVCIDNLHTGSLRNI----------RPLLNHPNFSFIEHD 68
Query: 81 SR----LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
R LEG + D NLA +P Y P+ T+ + + L +++ E + R++
Sbjct: 69 VREPLDLEGRL---DRVYNLACPASPPHYQQDPVGTMKTCVLGTLNLLELAREKSARILQ 125
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIER 194
ST EVYG D + P YV G + R Y K+ E
Sbjct: 126 ASTSEVYG---------DPEVHPQPETYV----------GHVNTIGPRACYDEGKRAAET 166
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L++ GL+ + R FN GPRM E RV++ F LR P+ +
Sbjct: 167 LMFDYQRMYGLDIKVARIFNTYGPRMH---------ENDGRVVSNFIVQALRGAPITVYG 217
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F ++ D + + +++E+PA G I N+GNPH E+++ +A EV A
Sbjct: 218 SGSQTRSFCFVDDLVRGLEMLMESPASVTGPI-NLGNPH-EMSIEAIAR---EVLAC--- 269
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S+ EF DD +R P +T + LGW P+ L LE+T+ Y
Sbjct: 270 -------TQSASTLEFKPLPVDDPKRRKPVITTAERLLGWRPQIPLRKGLEATIAY 318
>gi|433776687|ref|YP_007307154.1| nucleoside-diphosphate-sugar epimerase [Mesorhizobium australicum
WSM2073]
gi|433668702|gb|AGB47778.1| nucleoside-diphosphate-sugar epimerase [Mesorhizobium australicum
WSM2073]
Length = 348
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 153/353 (43%), Gaps = 49/353 (13%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
T+ + G GF+GSHLCE +L + I A + +++++ Q G RL +
Sbjct: 12 TVLVAGGAGFLGSHLCEALLRDGWRVICADNFLTGRMENINAIMDQPG------FRLIEQ 65
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
R L + D N+A +P Y P+ T + I L +++ + N+ RL+ S
Sbjct: 66 DICRPLDLGEPVDRIFNMACAASPPRYQADPIHTTRTCVIGTLNLLELAARNDARLLQAS 125
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P+ P R+D +V + R Y K+ E L +
Sbjct: 126 TSEVYGD------PEQHPQREDYVGHV-----------NCTGPRACYDEGKRTAETLCFD 168
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
+ + R FN GPRMD P++G R+++ L ++PL + G
Sbjct: 169 YLRAGKADVRVARIFNTYGPRMD-------PADG--RIVSNLIMQALEKRPLTIFGDGMQ 219
Query: 259 QRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ LM NP G N+GNP E T+ +LA ++ + S
Sbjct: 220 TRSFCYVSDLMDGLMGLMDINP--NPGKPVNLGNP-GEFTIVRLAALVKAMTGTKSDMTF 276
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L P DD +R PD++ LGW P+ L + L T++Y
Sbjct: 277 LPLP-------------QDDPRRRQPDISRAKTLLGWTPRVPLTEGLARTISY 316
>gi|348174442|ref|ZP_08881336.1| NAD-dependent epimerase/dehydratase [Saccharopolyspora spinosa NRRL
18395]
Length = 338
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 165/351 (47%), Gaps = 41/351 (11%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIKHDSR 82
GA GFIGSHL E+ LL H+++ LD + ++++L P S +Q +I +
Sbjct: 21 GAAGFIGSHLVER-LLADGHQVVGLDDLSTGRVENL--PVSDRNLRMVQG---SILDGAL 74
Query: 83 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEV 142
++ ++ AD+ +LAA L + +N V+ ++ R++ ST E+
Sbjct: 75 VDEVMADADVVFHLAAAVGAFVIQEHTLQGLLTNIHGTENVLDAALRHDARVLVASTSEI 134
Query: 143 YGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAE 202
YGK L + I GS K RW+Y+ AK + E + + E
Sbjct: 135 YGKNDKVGL----------------SEGDDRIIGSPLKSRWTYSEAKAIDESITHNYVRE 178
Query: 203 NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTF 262
GL IVR FN +GPR G+ +PR++A L+ +P+ + G+ R F
Sbjct: 179 LGLRAVIVRLFNTVGPRQSGRYGMV-----IPRLVA----QALQGRPVTIFGTGKQIRCF 229
Query: 263 IYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPT 322
++ DA+ A L+ + RA G N+GN +V++ +LA + + SG T
Sbjct: 230 CHVADAVPA-LVRLALLDRAQGMAVNLGNTE-QVSIEELAARIIAMTDSSSG-------T 280
Query: 323 VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
+ V +E YG GY+D +R+PD + + + + P+ +L D++ + Q R
Sbjct: 281 IQVPYEEAYGPGYEDLQRRVPDCSRARELIDFRPERTLDDIIRDVIDEQVR 331
>gi|413960213|ref|ZP_11399443.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. SJ98]
gi|413931990|gb|EKS71275.1| NAD-dependent epimerase/dehydratase [Burkholderia sp. SJ98]
Length = 320
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 163/375 (43%), Gaps = 62/375 (16%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRLNI 77
M G GF+GSHLCE+ LL H +L +D + D I HLL D F +
Sbjct: 1 MTGGAGFLGSHLCER-LLALGHDVLCVDNFYTGTKDNIAHLL--------DSPNFELM-- 49
Query: 78 KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+HD +++ D NLA +P Y P+ T ++ A+ ++ + R+
Sbjct: 50 RHDVTFPLYVEV-DEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVHARIFQA 108
Query: 138 STCEVYGKTIGSFLPKDSPLR-QDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG D+ + Q AY+ P R Y K+ E L
Sbjct: 109 STSEVYG---------DAHVHPQQEAYWGNVNPIGP---------RSCYDEGKRCAETLF 150
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
++GL I R FN GPRM PS+G RV++ F L +P+ + G
Sbjct: 151 MDYRRQHGLSIKIARIFNTYGPRMH-------PSDG--RVISNFMMQALSGEPITVYGEG 201
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F Y+ D ++A + +++ P G + N+GNPH E+++ ++A + E+
Sbjct: 202 SQTRSFCYVDDMVDAFIRLMDTPDELTGPV-NLGNPH-ELSMLEIARRIIEL-------- 251
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH-RTY 375
T S F DD R PD+ + LGW P T L + L T QH R
Sbjct: 252 -----TGSSSEIVFKPLPMDDPWHRQPDIALARDALGWTPTTPLDEGLRRTA--QHFRGV 304
Query: 376 AEAIKQAVAKPVASS 390
EA++ A +A+S
Sbjct: 305 IEAMQGRHALNIATS 319
>gi|168034918|ref|XP_001769958.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678679|gb|EDQ65134.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 440
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 163/358 (45%), Gaps = 66/358 (18%)
Query: 12 GRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQ 71
G P KP+ I + G GF+GSHL ++ L+E ++ +D + K + + G R +
Sbjct: 115 GLPRKPLRIVVTGGAGFVGSHLVDR-LIERGDSVIVVDNFFTGRKENV--QHHFGNPRFE 171
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTI---YSNFIDALPVVKYCS 128
I+HD +E L+ D +LA +P Y P+ TI ++N + L ++
Sbjct: 172 L----IRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPIKTIISFFTNVVGTLNMLGLAK 226
Query: 129 ENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYA 186
R + ST EVYG DP + KE +G++ R Y
Sbjct: 227 RIGARFLLTSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGVRSCYD 267
Query: 187 CAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNL 244
K+ E L Y GA+ ++ I R FN GPRM G RV++ F
Sbjct: 268 EGKRTAETLAMDYHRGAD--VQVRIARIFNTYGPRMCIDDG---------RVVSNFVAQA 316
Query: 245 LRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLA 302
LR++P+ + G+ R+F ++ D +E ++ ++E H+ FN+GNP E T+ +LA
Sbjct: 317 LRKEPMTVYGDGKQTRSFQFVSDLVEGLMKLMEGE-----HVGPFNLGNP-GEFTMLELA 370
Query: 303 EMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
+++ +V +PT + KE DD KR PD++ + LGW PK SL
Sbjct: 371 QVVKDVI----------DPTATIEYKE---NTSDDPHKRKPDISKAKELLGWEPKISL 415
>gi|413945004|gb|AFW77653.1| hypothetical protein ZEAMMB73_341531 [Zea mays]
Length = 446
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 161/359 (44%), Gaps = 71/359 (19%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-----NDKIKHLLEPESQTGADRI 70
K + + + G GF+GSHL ++ LLE ++ +D + ++ + HL +P +
Sbjct: 122 KALRVLVTGGAGFVGSHLVDR-LLERGDSVIVVDNFFTGRKDNVLHHLNDPNFEM----- 175
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
I+HD +E ++ D +LA +P Y P+ TI +N + L ++
Sbjct: 176 ------IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRI 228
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
N R + ST EVYG PL Q P + +P R Y K+
Sbjct: 229 NARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKR 271
Query: 191 LIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
E L Y GA LE I R FN GPRM G RV++ F LR++
Sbjct: 272 TAETLTMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKE 320
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMT 306
PL + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++
Sbjct: 321 PLTVYGDGKQTRSFQYVSDLVEGLMKLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQ 374
Query: 307 EVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+ T+D +++ EF DD KR PD++ + LGW PK L + L
Sbjct: 375 D--------------TIDPNARIEFRKNTQDDPHKRKPDISRAKEFLGWEPKIPLREGL 419
>gi|116620493|ref|YP_822649.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
gi|116223655|gb|ABJ82364.1| NAD-dependent epimerase/dehydratase [Candidatus Solibacter usitatus
Ellin6076]
Length = 313
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 156/352 (44%), Gaps = 51/352 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY-NDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G+ GF+GSH+CE++L E H ++ALD + +L E R+QF +I
Sbjct: 3 IVVSGSAGFVGSHMCERLLNEG-HSVVALDNFLTGSPANLAHLEKHP---RLQFVEQDIT 58
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
++G + D +N+A+ +P DY P++T+ I + +++ R + S
Sbjct: 59 RPFTVDGAV---DCVVNMASPASPKDYLEYPIETLDVGSIGSRNMLELALAKGARYLVTS 115
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T E YG P P Q Y+ P R Y +K+ E + A
Sbjct: 116 TSECYGD------PMVHP--QVETYWGNVNPVGP---------RSCYDESKRFAEAITMA 158
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
++G+ I R FN GPRM G RV+ F + LR +P+ + G
Sbjct: 159 YHRKHGVRTNIARIFNTYGPRMKLDDG---------RVVPAFLDQALRGEPMTVFGTGSQ 209
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+F Y+ D ++ + ++++ R + N+GNP E+T+ + AE + +
Sbjct: 210 TRSFCYVSDLVDGLYRLMQSDER---YPVNLGNP-REMTILEFAEHIRAM---------- 255
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S F+ DD +R PD+T LGW P+ SL D L T+ Y
Sbjct: 256 ---TGTKSEIIFHPLPEDDPKQRKPDITKARSVLGWEPRISLEDGLRDTVEY 304
>gi|356570964|ref|XP_003553652.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]
Length = 420
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 158/352 (44%), Gaps = 65/352 (18%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL ++++ I+ + + + ++++ G +
Sbjct: 101 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---HFGNPNFEL--- 154
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E L+ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 155 -IRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 212
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DP + KE +G++ R Y K+ E
Sbjct: 213 LTSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGVRSCYDEGKRTAE 253
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F LR++PL
Sbjct: 254 TLTMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRKEPLT 302
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++ E
Sbjct: 303 VYGDGKQTRSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQE-- 354
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
T+D +K E+ DD KR PD++ +QLGW PK L
Sbjct: 355 ------------TIDPEAKIEYRPNTEDDPHKRKPDISRAKEQLGWEPKVDL 394
>gi|359806080|ref|NP_001240928.1| uncharacterized protein LOC100819843 [Glycine max]
gi|255646194|gb|ACU23582.1| unknown [Glycine max]
Length = 342
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 159/345 (46%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D + K L+ G R + I+H
Sbjct: 31 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNFFTGSKDNLK--KWIGHPRFEL----IRH 84
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D + LI++ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 85 DVTEQLLIEV-DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 143
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q +Y+ + +P R Y K++ E L++
Sbjct: 144 SEVYGD------PLEHP--QPESYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 186
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 187 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRGEPLTVQVPGTQT 237
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E L
Sbjct: 238 RSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMIELAENVKE----------LI 283
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V+++ E DD +R PD+T + LGW PK L D L
Sbjct: 284 NPKVEINMVE---NTPDDPRQRKPDITKAKELLGWEPKVKLRDGL 325
>gi|118476195|ref|YP_893346.1| UDP-glucose 4-epimerase [Bacillus thuringiensis str. Al Hakam]
gi|196045289|ref|ZP_03112521.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
03BB108]
gi|376264462|ref|YP_005117174.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus F837/76]
gi|118415420|gb|ABK83839.1| UDP-glucose 4-epimerase [Bacillus thuringiensis str. Al Hakam]
gi|196023873|gb|EDX62548.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
03BB108]
gi|364510262|gb|AEW53661.1| dTDP-glucose 4,6-dehydratase [Bacillus cereus F837/76]
Length = 321
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALNGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGEQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAEVIKKLTKSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+ + + + + + + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVAKLRELVQFQAEVTWEEGLKETIKW 314
>gi|424908875|ref|ZP_18332252.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392844906|gb|EJA97428.1| nucleoside-diphosphate-sugar epimerase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 340
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 66/371 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ LL + H+++ LD + ++HL R L
Sbjct: 25 VLVNGGAGFLGSHLCER-LLSSGHEVICLDDLSTGRTANVEHL----------RNNKRFL 73
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD R I ++ L N A+ +P DY P+ T+ +N + A+ V++ ++
Sbjct: 74 MVEHDVRKPYDIDVS-LIFNFASPASPPDYQRDPVGTLLTNVLGAVNVLEVARRCGATVV 132
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG D + P Y FG++ R Y K+ E
Sbjct: 133 QSSTSEVYG---------DPHVNPQPETY----------FGNVNTIGPRACYDEGKRSAE 173
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + G++ + R FN GPRM P +G RV++ F L+ + +
Sbjct: 174 TLFFDYHRTFGVDIKVGRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGDDITIY 224
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D I+ L P G I N+GNP E+ VRQLA+++ + S
Sbjct: 225 GDGSQTRSFCYVDDLIDGFLRFSAKPKDCTGPI-NLGNPA-EIPVRQLADIVIRMTGSRS 282
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY--- 370
L DD +R PD++ N+ L W P+ L LE T+ Y
Sbjct: 283 RIVHLP-------------AAIDDPQQRRPDISRANELLKWQPRVPLEIGLERTIVYFDA 329
Query: 371 --QHRTYAEAI 379
R AEA+
Sbjct: 330 LLAGRKVAEAV 340
>gi|27381115|ref|NP_772644.1| dTDP-glucose 4-6-dehydratase [Bradyrhizobium japonicum USDA 110]
gi|27354282|dbj|BAC51269.1| dTDP-glucose 4-6-dehydratase [Bradyrhizobium japonicum USDA 110]
Length = 320
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 161/360 (44%), Gaps = 67/360 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN--- 76
I + G GFIGSH+CE+ LL+ ++++ D Y TG+ R H +
Sbjct: 11 ILVTGGAGFIGSHICER-LLDAGAEVVSADNYF------------TGSRRNIAHLIANPL 57
Query: 77 ---IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
++HD I++ D NLA +P Y P+ T ++ A+ ++ R
Sbjct: 58 FEAVRHDVTFPLYIEV-DAIFNLACPASPIHYQRDPVQTTKTSVHGAINMLGLAKRLKAR 116
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQL 191
+ ST EVYG DP + ED +G++ R Y K+
Sbjct: 117 IFQASTSEVYG---------------DPLIHPQTED----YWGNVNPIGIRSCYDEGKRC 157
Query: 192 IERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
E L + ++GL + R FN GPRM P++G RV++ F L+ +P+
Sbjct: 158 AETLFFDYWRQHGLPIKVARIFNTYGPRMQ-------PNDG--RVVSSFIVQALQGEPIT 208
Query: 252 LV-DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
+ DGGQ+ R+F Y+ D +EA++ ++ G I N+GN ++E T+R+LAE + E+
Sbjct: 209 VFGDGGQT-RSFCYVDDLVEAIMRLMVTKEDITGPI-NIGN-NSEFTIRELAEKVIELTG 265
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S P DD +R PD+T L W PK +L D L+ T+ Y
Sbjct: 266 SRSKLVFKPLPQ-------------DDPRQRQPDLTKAKTALNWEPKVALEDGLKETIAY 312
>gi|212704387|ref|ZP_03312515.1| hypothetical protein DESPIG_02442 [Desulfovibrio piger ATCC 29098]
gi|212672108|gb|EEB32591.1| NAD dependent epimerase/dehydratase family protein [Desulfovibrio
piger ATCC 29098]
Length = 318
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 164/367 (44%), Gaps = 57/367 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GF+GSHLC + LL+ H++L +D + + +E D +F L +H
Sbjct: 7 VLVTGGSGFLGSHLCAR-LLDEGHEVLCVDNFFSSARSNVE----ELMDNKRFELL--RH 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +++ D NLA +P Y P+ TI + A+ ++ R+ ST
Sbjct: 60 DVTFPLFVEV-DEIYNLACPASPVHYQHDPVQTIKTCVHGAINMLGLAKRLKARIFQAST 118
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIERLIY 197
EVYG D + P Y +G + R Y K+ E L +
Sbjct: 119 SEVYG---------DPDVHPQPESY----------WGHVNPNGIRSCYDEGKRCAEALFF 159
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
+ +N + + R FN GP+M P++G RV++ F L+ +P+ + G
Sbjct: 160 SYRRQNNVNIKVGRIFNTYGPKMH-------PNDG--RVVSNFIVQALKGEPITIYGDGS 210
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D +E + ++ P G + N+GNP E T+R+LAE + A
Sbjct: 211 QTRSFCYVDDLVECMCRLMATPDDFTGPV-NMGNP-GEFTIRELAEKVI----------A 258
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAE 377
L + + + G DD +R PD+++ + LGW PK L + L+ T+ Y + E
Sbjct: 259 LTNSSSKLICEPLPG---DDPKQRRPDISLAREVLGWEPKVQLEEGLKKTIAY----FDE 311
Query: 378 AIKQAVA 384
I++ +A
Sbjct: 312 QIRKGLA 318
>gi|212275951|ref|NP_001130758.1| hypothetical protein [Zea mays]
gi|194690038|gb|ACF79103.1| unknown [Zea mays]
gi|223948001|gb|ACN28084.1| unknown [Zea mays]
gi|223950069|gb|ACN29118.1| unknown [Zea mays]
gi|224030697|gb|ACN34424.1| unknown [Zea mays]
gi|414866133|tpg|DAA44690.1| TPA: hypothetical protein ZEAMMB73_752508 [Zea mays]
gi|414866134|tpg|DAA44691.1| TPA: hypothetical protein ZEAMMB73_752508 [Zea mays]
Length = 350
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 155/345 (44%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++++ H+++ D + K L+ G R + I+H
Sbjct: 37 ILVTGGAGFIGSHLVDRLMENEKHEVIVADNFFTGSKDNLK--KWIGHPRFEL----IRH 90
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 91 DV-TEPLLVEVDQIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 149
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q AY+ + +P R Y K++ E L++
Sbjct: 150 SEVYGD------PLEHP--QTEAYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 192
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 193 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAVRGEPLTVQKPGTQT 243
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ ++ N N+GNP E T+ +LAE + E L
Sbjct: 244 RSFCYVADMVDGLIRLMNG---NNTGPINLGNP-GEFTMLELAENVKE----------LI 289
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P + V+ E DD +R PD+T + LGW PK L D L
Sbjct: 290 NPDITVTMTE---NTPDDPRQRKPDITKAKEVLGWEPKIVLKDGL 331
>gi|374849729|dbj|BAL52736.1| NAD-dependent epimerase/dehydratase [uncultured Chloroflexi
bacterium]
Length = 319
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 62/361 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + GA GF+GSHLC++ L E H+++ +D + + HL G +R F+R
Sbjct: 3 ILITGAAGFLGSHLCDRFLAEG-HEVIGMDNFITGKPANLAHL------AGHERFSFYRH 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPA-----DYNTRPLDTIYSNFIDALPVVKYCSEN 130
++ + + G + D ++ A+ +P Y P+ T+ + + + +
Sbjct: 56 DVSNYIFVPGKV---DAVLHFASPASPNPQSPYGYFNLPIQTMKAGALGTHNTLGVARAH 112
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
R + ST E+YG P+D P DP R Y +K+
Sbjct: 113 GARYLLASTSEIYGDPAVCPQPEDYPGNVDPI-----------------GPRAVYDESKR 155
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E L A +G++ IVR FN GPRMD P +G R + F L QPL
Sbjct: 156 FAEALTMAYHRYHGVDTRIVRIFNTYGPRMD-------PEDG--RAIPNFLKQALLGQPL 206
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI-FNVGNPHNEVTVRQLAEMMTEVY 309
+ G R+F Y+ D IE ++ ++ + H+ N+G+PH E+T+ +LA+ + +
Sbjct: 207 TVYGDGSQTRSFCYVDDLIEGIVRLL----YSEEHLPVNLGSPH-EITLLELAQWINRIT 261
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
+G + E G D +R PD+T LGW P+ SL + ++ T+
Sbjct: 262 GNQAGIVFVPE-----------GRSPRDPQRRQPDITRARTILGWEPRISLEEGIQRTIP 310
Query: 370 Y 370
Y
Sbjct: 311 Y 311
>gi|381165015|ref|ZP_09874245.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora azurea
NA-128]
gi|379256920|gb|EHY90846.1| nucleoside-diphosphate-sugar epimerase [Saccharomonospora azurea
NA-128]
Length = 331
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 157/370 (42%), Gaps = 48/370 (12%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ ++G GFIGSH+CE+ LL+ H++ +D + + ++ + + +F ++
Sbjct: 8 VFVLGGAGFIGSHVCEQ-LLDDGHRVTCVDSLLTGSVDNV---ATLSRHPDFRFVEHDVT 63
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
+ D ++LA+ +P DY PL+T+ + ++ + + R + S
Sbjct: 64 RPLSQWPDLPAPDSVLHLASPASPPDYLRLPLETLRVGAVGTANALELATRHGARFLLAS 123
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P + P R+ +Y+ P R Y AK+ E L A
Sbjct: 124 TSEVYGD------PLEHPQRE--SYWGNVNPIGP---------RSVYDEAKRYAEALTLA 166
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
E+G + + R FN GPRM G R++ F L PL + G
Sbjct: 167 YHREHGTDVAVARIFNTYGPRMRVDDG---------RMIPNFITQALTNAPLTVAGTGTQ 217
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+ Y+ D + +L + + N+GNPH E+TVR LAE EV A +
Sbjct: 218 TRSVCYVDDTVSGLLALWRSGLTGP---VNIGNPH-ELTVRHLAE---EVRAVTGSD--- 267
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378
S+ F DD +R PD+T+ LGW P+T L D L T+ + R +
Sbjct: 268 -------STVTFVPGAVDDPRRRCPDITLARTALGWEPETGLHDGLRRTIAWFARNVHSS 320
Query: 379 IKQAVAKPVA 388
+ P A
Sbjct: 321 DRDIAVVPSA 330
>gi|296086832|emb|CBI32981.3| unnamed protein product [Vitis vinifera]
Length = 178
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/61 (78%), Positives = 54/61 (88%)
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
RWSYACAKQLIERL+Y EG E+GLEF+I++ FNWIGPRMDFIP IDG SE +PRVL CFS
Sbjct: 8 RWSYACAKQLIERLVYVEGVEHGLEFSIMKAFNWIGPRMDFIPSIDGFSEVIPRVLPCFS 67
Query: 242 N 242
N
Sbjct: 68 N 68
>gi|392418383|ref|YP_006454988.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium chubuense
NBB4]
gi|390618159|gb|AFM19309.1| nucleoside-diphosphate-sugar epimerase [Mycobacterium chubuense
NBB4]
Length = 330
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 157/349 (44%), Gaps = 47/349 (13%)
Query: 21 CMIGAGGFIGSHLCEKILLETPHKILALDVYN-----DKIKHLLEPESQTGADRIQFHRL 75
+ G GFIGSHL + LLE ++ LD ++ + H +P R+Q
Sbjct: 4 VITGGAGFIGSHLTDH-LLEAGDTVVVLDDFSTGSIANLAHHAHDP-------RLQVVEG 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+ + +EG++ AD +LAA PL ++ N V+ ++
Sbjct: 56 TVLNRRVVEGVVADADRIFHLAAAVGVRRIIDEPLKSLRVNITGTENVLDAALARGVTMV 115
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST E+YGK + L +DS I GS RWSYA AK + E L
Sbjct: 116 LASTSEIYGKNTANRLSEDSD----------------RILGSPLMSRWSYAAAKAIDEAL 159
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+A E GL+ R FN +GPR G+ V+ + LR + L +
Sbjct: 160 AHAYWRELGLKVATARLFNTVGPRQTGRYGM---------VVPTLVSQALRGETLTVFGD 210
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R F Y+ D + A++ + E PA A G FN+G EV++ +LA + E+ S +
Sbjct: 211 GRQTRCFSYVGDIVPALVSLSEVPA-ALGLAFNLGGLR-EVSILELAGRIIELLDS-SSD 267
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L V + YGEG++D +R+PD+++ L + P+T+L +++
Sbjct: 268 IEL------VPYDKAYGEGFEDMRRRMPDISLAANVLHFRPQTNLDEII 310
>gi|226496329|ref|NP_001140492.1| uncharacterized protein LOC100272553 [Zea mays]
gi|194699706|gb|ACF83937.1| unknown [Zea mays]
Length = 431
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 167/373 (44%), Gaps = 72/373 (19%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-----NDKIKHLLEPESQTGADRI 70
K + + + G GF+GSHL ++ LL+ ++ +D + ++ + HL +P +
Sbjct: 107 KVLRVLVTGGAGFVGSHLVDR-LLQRGDSVIVVDNFFTGRKDNVLHHLGDPNFEM----- 160
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
I+HD +E ++ D +LA +P Y P+ TI +N + L ++
Sbjct: 161 ------IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRI 213
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
N R + ST EVYG PL Q P + +P R Y K+
Sbjct: 214 NARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPIGL------RSCYDEGKR 256
Query: 191 LIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
E L Y GA LE I R FN GPRM G RV++ F LR++
Sbjct: 257 TAETLTMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKE 305
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMT 306
PL + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++
Sbjct: 306 PLTVYGDGKQTRSFQYVSDLVEGLMKLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQ 359
Query: 307 EVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
+ T+D +++ EF DD KR PD+ + LGW PK L + L
Sbjct: 360 D--------------TIDPNARIEFRQNTQDDPHKRKPDIGRAKELLGWEPKIPLREGLP 405
Query: 366 STLT-YQHRTYAE 377
+T ++ R + +
Sbjct: 406 LMVTDFRKRIFGD 418
>gi|354613185|ref|ZP_09031115.1| dTDP-glucose 4,6-dehydratase [Saccharomonospora paurometabolica YIM
90007]
gi|353222485|gb|EHB86792.1| dTDP-glucose 4,6-dehydratase [Saccharomonospora paurometabolica YIM
90007]
Length = 344
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 152/356 (42%), Gaps = 52/356 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHL E + E ++ LD D L+ P GA R +++
Sbjct: 14 VLVTGGHGFIGSHLVEALAAEG-RRVTVLDP-ADPPPDLVVP---AGAVR------HVRG 62
Query: 80 DSRLEGLIK-----MADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
D R L++ L ++ +++ Y PLD I V+ + +L
Sbjct: 63 DVRDTTLVRKEITATTGLIVHFSSLVGVDQYLYDPLDVIDIAVGGTRAVLDAARDAGAKL 122
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG+ D+P +D A + G RWSY+ +K E
Sbjct: 123 LLASTSEVYGRN------PDTPWAEDSAR----------VLGPTTADRWSYSTSKATAEH 166
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
+ +A G T++R FN GPR P+ V++ + LLR P L D
Sbjct: 167 MTFAHARRYGTRATVLRYFNVYGPRQR-------PAY----VVSNTVHRLLRGVPALLYD 215
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R F Y++DA+EA L + + +R +G + NVG+ E+T M E+ V
Sbjct: 216 RGDQTRCFTYVRDAVEAT-LAVASSSRVDGVVLNVGS-EREIT-------MAEIVRAVGD 266
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V + + +G Y+D +R+PD + I LGW TS+ L T+ +
Sbjct: 267 AVGCRSDPVLLDTGSAFGSVYEDIPRRVPDTSRIAGLLGWRATTSVEQGLRETVAW 322
>gi|225435012|ref|XP_002284153.1| PREDICTED: UDP-glucuronic acid decarboxylase 1 [Vitis vinifera]
gi|147843232|emb|CAN80550.1| hypothetical protein VITISV_019391 [Vitis vinifera]
gi|297746110|emb|CBI16166.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 159/345 (46%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L+ G R + I+H
Sbjct: 35 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK--KWIGHPRFEL----IRH 88
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 89 DV-TEPLLIEVDKIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 147
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q +Y+ + +P R Y K++ E L++
Sbjct: 148 SEVYGD------PLEHP--QTESYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 190
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F LR +PL + G
Sbjct: 191 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEPLTVQAPGTQT 241
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E+ ++ E ++
Sbjct: 242 RSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMLELAETVKEL---INPEVVIK 294
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
VD + DD +R PD++ + LGW PK L D L
Sbjct: 295 --MVDNTP--------DDPRQRKPDISKAKELLGWEPKIKLRDGL 329
>gi|421594210|ref|ZP_16038664.1| NAD-dependent epimerase/dehydratase, partial [Rhizobium sp. Pop5]
gi|403699700|gb|EJZ17071.1| NAD-dependent epimerase/dehydratase, partial [Rhizobium sp. Pop5]
Length = 311
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/350 (29%), Positives = 150/350 (42%), Gaps = 57/350 (16%)
Query: 25 AGGFIGSHLCEKILLETPHKILALDVYN----DKIKHLLEPESQTGADRIQFHRLNIKHD 80
GF+GSHLCE+ LLE H+++ LD ++ ++HLL +FH I HD
Sbjct: 1 GAGFLGSHLCER-LLERGHRVICLDNFSTGRGSNVEHLLS--------NARFHI--IDHD 49
Query: 81 SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTC 140
R I+ A L N A+ +P DY P+ T+ +N + A+ + + ++ ST
Sbjct: 50 VRQPFDIE-ASLIFNFASPASPPDYQRDPVGTMLTNVLGAVNTLDCARKTGATVVQSSTS 108
Query: 141 EVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAEG 200
EVYG P +P Q +Y P R Y K+ E L +
Sbjct: 109 EVYGD------PNQNP--QHESYCGNVNQIGP---------RGCYDEGKRSAETLFFDYH 151
Query: 201 AENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQR 260
G++ + R FN GPRM G RV++ F LR L + G+ R
Sbjct: 152 RTYGVDIKVGRIFNTYGPRMRQDDG---------RVVSNFIVQALRNDDLTIYGDGEQTR 202
Query: 261 TFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEE 320
+F Y+ D +E L + G I N+GNP E+TVR+LAE++ E+ S L
Sbjct: 203 SFCYVDDLVEGFLRFSAAGSACIGPI-NLGNPA-EITVRRLAEIVLELTNSRSRIVHLPR 260
Query: 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T DD +R PD++ LGW P L L T+ Y
Sbjct: 261 VT-------------DDPRQRRPDISRALADLGWQPLVGLETGLVRTVDY 297
>gi|238027116|ref|YP_002911347.1| NAD-dependent epimerase/dehydratase [Burkholderia glumae BGR1]
gi|237876310|gb|ACR28643.1| NAD-dependent epimerase/dehydratase [Burkholderia glumae BGR1]
Length = 343
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 156/360 (43%), Gaps = 67/360 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE+++ + H +L +D + D I HL + D +
Sbjct: 9 ILVTGGAGFLGSHLCERLVADG-HDVLCVDNFYTGTKDNIAHLRD------CDNFEL--- 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y P+ T ++ A+ ++ R+
Sbjct: 59 -LRHDVTFPLYVEV-DQIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVKARIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG D + KED +G + R Y K+ E
Sbjct: 117 QASTSEVYG---------------DALVHPQKED----YWGHVNPLGPRACYDEGKRCAE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L ++GL+ I R FN GPRM P++G RV++ F L+ +PL L
Sbjct: 158 TLFMDYRRQHGLQIRIARIFNTYGPRMH-------PADG--RVVSNFMMQALQGEPLTLY 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMI---ENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
G R+F Y+ D I+A + ++ E+P G N+GNPH EVT+R AE + +
Sbjct: 209 GDGSQTRSFCYVDDMIDAFVRLMNLDEDP----GGPVNLGNPH-EVTMRATAERIVALTG 263
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S P V + DD R PD+ LGW P TSL + L +T Y
Sbjct: 264 SAS-------PIV------LHPLPVDDPWHRQPDIARAQALLGWRPGTSLDEGLAATARY 310
>gi|356564597|ref|XP_003550538.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]
Length = 395
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 170/379 (44%), Gaps = 64/379 (16%)
Query: 6 VRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQT 65
V L + G+ K V + G GF+GSHL ++++ I+ + + + +++L
Sbjct: 63 VPLGIKGKKQKRVLVT--GGAGFVGSHLVDRLIERGDSVIVVDNFFTGRKENVLH---HM 117
Query: 66 GADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVK 125
G + I+HD +E ++ D +LA +P Y P+ TI +N + L ++
Sbjct: 118 GNPNFEL----IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLG 172
Query: 126 YCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSY 185
R + ST EVYG PL Q P + +P R Y
Sbjct: 173 LAKRVGARFLISSTSEVYG----------DPL-QHPQAETYWGNVNPI------GVRSCY 215
Query: 186 ACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
K+ E L Y GA G+E I R FN GPRM G RV++ F
Sbjct: 216 DEGKRTAETLAMDYHRGA--GIEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQ 264
Query: 244 LLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQL 301
LR++PL + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +L
Sbjct: 265 ALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLEL 318
Query: 302 AEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
A+++ E T+D ++K EF DD KR PD++ + LGW P SL
Sbjct: 319 AQVVQE--------------TIDPNAKIEFRPNTEDDPHKRKPDISKAKELLGWQPSVSL 364
Query: 361 WDLLESTLT-YQHRTYAEA 378
+ L ++ ++ R + ++
Sbjct: 365 REGLPLMVSDFRQRLFGDS 383
>gi|398344075|ref|ZP_10528778.1| nucleoside-diphosphate-sugar epimerase [Leptospira inadai serovar
Lyme str. 10]
Length = 311
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 158/352 (44%), Gaps = 52/352 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHLCE+ L+ H+++ LD ++ K +E R + R +I
Sbjct: 5 VLVTGGAGFIGSHLCER-LINQGHEVICLDNFHTGRKENVE--KLLSNSRFELIRHDITE 61
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
RLE D N A +P Y + + TI +N + + + R++ ST
Sbjct: 62 PIRLE-----VDKIYNFACPASPVHYQSNAIKTIKTNVLGTMNALGIAKRVKARILQAST 116
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q +Y+ + +P R Y K++ E L +
Sbjct: 117 SEVYGN------PLEHP--QKESYW---GNVNPIGI------RSCYDEGKRVAETLCFDY 159
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ ++ ++R FN GPRM P +G RV++ F L + + + G
Sbjct: 160 HRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFVVQALAGRDITIYGDGSQT 210
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D +E ++ M++ P N+GN E TV++LAE++ +
Sbjct: 211 RSFCYVDDLVEGIIKMMDAPDFIGP--VNLGN-DGEFTVKELAELVIQ------------ 255
Query: 320 EPTVDVSSKEFYGE-GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ SSK Y DD +R PD+++ Q+LG+ PK SL D + T+ Y
Sbjct: 256 --EIGSSSKIVYKPLPQDDPSRRRPDLSLARQKLGYEPKVSLKDGIRKTVEY 305
>gi|442321424|ref|YP_007361445.1| NAD-dependent epimerase/dehydratase [Myxococcus stipitatus DSM
14675]
gi|441489066|gb|AGC45761.1| NAD-dependent epimerase/dehydratase [Myxococcus stipitatus DSM
14675]
Length = 321
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 154/354 (43%), Gaps = 55/354 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
+ ++G GF+GSHLCE++L + + A+D + ++L + + G F + +I
Sbjct: 9 VVVLGGAGFVGSHLCERLLDDGAASVTAVDNLITGNEENLRTLKGRPG---FSFVKADIV 65
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
++G + D +NLA+ +P DY PL+T+ I +K N + S
Sbjct: 66 EGIPVQGPV---DYVLNLASPASPIDYANLPLETLRVGSIGTENGLKLAEANKAVFLMAS 122
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLI 196
T EVYG DP + +ED +G++ R Y AK+ E +
Sbjct: 123 TSEVYG---------------DPLVHPQRED----YWGNVNPIGPRSVYDEAKRYAEAVT 163
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
A G G++ IVR FN GPRM G RV+ F L+ + + G
Sbjct: 164 AAYG-RKGVQVRIVRIFNTYGPRMRLNDG---------RVVPAFVGQALKGEDFTVFGDG 213
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+F Y+KD ++ ++ + + + H N+GNP E+T+RQ AE +
Sbjct: 214 SQTRSFCYVKDLVDGLVRLALSDEQ---HPVNIGNPR-EMTIRQFAEAVRAAAGGGG--T 267
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+E+P DD +R PD+ LGW PK L D L T+ +
Sbjct: 268 IIEKPLPK-----------DDPKQRQPDIGRARSILGWEPKVPLEDGLRETIAW 310
>gi|302848856|ref|XP_002955959.1| hypothetical protein VOLCADRAFT_66420 [Volvox carteri f.
nagariensis]
gi|300258685|gb|EFJ42919.1| hypothetical protein VOLCADRAFT_66420 [Volvox carteri f.
nagariensis]
Length = 328
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 164/368 (44%), Gaps = 70/368 (19%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLL-EPESQTGADRIQFHR 74
+ + G GF+GSHLC+ L+E ++ LD + + I HLL +P +
Sbjct: 21 VLVTGGAGFVGSHLCD-YLVERGDHVICLDNFFTGSKENIAHLLGKPNFEV--------- 70
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
I+HD +E ++ D + A +P Y P+ T ++F+ + ++ R
Sbjct: 71 --IRHDV-VEPILLEVDQVFHCACPASPIHYKYNPIKTAKTSFLGTMNMLGLAKRCKARF 127
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLI 192
+ ST EVYG DP + KE +G++ +R Y K++
Sbjct: 128 LITSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGERSCYDEGKRVA 168
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L E+GL+ IVR FN GPRM G RV++ F + L +P+ +
Sbjct: 169 ETLAMDYYREHGLQVRIVRIFNTYGPRMALDDG---------RVVSNFVSQALTNKPITV 219
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYA 310
GQ R+F Y+ D + ++ +++ P HI FN+GNP E T+ +LA ++ EV
Sbjct: 220 YGDGQQTRSFQYVSDLVRGLVAVMDGP-----HIGPFNIGNP-GEFTMLELANLVKEV-- 271
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWD-LLESTLT 369
V+ A + E+ DD +R PD+T + LGW P+ L + LL
Sbjct: 272 -VNPNAVI----------EYRENTADDPSRRRPDITKATEMLGWKPEVPLREGLLRMVDD 320
Query: 370 YQHRTYAE 377
++ R E
Sbjct: 321 FKRRLGVE 328
>gi|219884637|gb|ACL52693.1| unknown [Zea mays]
gi|413948860|gb|AFW81509.1| hypothetical protein ZEAMMB73_704580 [Zea mays]
Length = 438
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 167/373 (44%), Gaps = 72/373 (19%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-----NDKIKHLLEPESQTGADRI 70
K + + + G GF+GSHL ++ LL+ ++ +D + ++ + HL +P +
Sbjct: 114 KVLRVLVTGGAGFVGSHLVDR-LLQRGDSVIVVDNFFTGRKDNVLHHLGDPNFEM----- 167
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
I+HD +E ++ D +LA +P Y P+ TI +N + L ++
Sbjct: 168 ------IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRI 220
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
N R + ST EVYG PL Q P + +P R Y K+
Sbjct: 221 NARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKR 263
Query: 191 LIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
E L Y GA LE I R FN GPRM G RV++ F LR++
Sbjct: 264 TAETLTMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKE 312
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMT 306
PL + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++
Sbjct: 313 PLTVYGDGKQTRSFQYVSDLVEGLMKLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQ 366
Query: 307 EVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
+ T+D +++ EF DD KR PD+ + LGW PK L + L
Sbjct: 367 D--------------TIDPNARIEFRQNTQDDPHKRKPDIGRAKELLGWEPKIPLREGLP 412
Query: 366 STLT-YQHRTYAE 377
+T ++ R + +
Sbjct: 413 LMVTDFRKRIFGD 425
>gi|206974248|ref|ZP_03235165.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
H3081.97]
gi|217958044|ref|YP_002336588.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
AH187]
gi|222094242|ref|YP_002528299.1| udp-glucose 4-epimerase (nad-dependent epimerase) [Bacillus cereus
Q1]
gi|375282580|ref|YP_005103017.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
NC7401]
gi|423356665|ref|ZP_17334267.1| hypothetical protein IAU_04716 [Bacillus cereus IS075]
gi|423570445|ref|ZP_17546691.1| hypothetical protein II7_03667 [Bacillus cereus MSX-A12]
gi|206747488|gb|EDZ58878.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
H3081.97]
gi|217065621|gb|ACJ79871.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
AH187]
gi|221238297|gb|ACM11007.1| UDP-glucose 4-epimerase (NAD-dependent epimerase) [Bacillus cereus
Q1]
gi|358351105|dbj|BAL16277.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
NC7401]
gi|401077517|gb|EJP85854.1| hypothetical protein IAU_04716 [Bacillus cereus IS075]
gi|401203867|gb|EJR10701.1| hypothetical protein II7_03667 [Bacillus cereus MSX-A12]
Length = 321
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 162/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYDVTIVDNFYKGKNKYHNELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++A ++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAAVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|116329518|ref|YP_799238.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116329833|ref|YP_799551.1| nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
gi|116122262|gb|ABJ80305.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis str. L550]
gi|116123522|gb|ABJ74793.1| Nucleoside-diphosphate-sugar epimerase [Leptospira borgpetersenii
serovar Hardjo-bovis str. JB197]
Length = 312
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 162/351 (46%), Gaps = 50/351 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHLCE++L E I +++ + K++ + S + +F R +I
Sbjct: 6 ILITGGAGFIGSHLCERLLKEGNEVICLDNLHTGRKKNIQKLFSDP---KFEFIRHDITD 62
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+LE D N+A +P Y + + TI +N + + + R++ ST
Sbjct: 63 PIKLE-----VDQIYNMACPASPIHYQSNAIKTIKTNVLGMMNTLGLAKRVKARILQAST 117
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q Y+ + +P R Y K++ E L +
Sbjct: 118 SEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAETLCFDY 160
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ ++ ++R FN GP+M P++G RV++ F L+++ + L G+
Sbjct: 161 QRNHKVDVRVIRIFNTYGPKM-------LPNDG--RVVSNFIVQALKKEDITLYGEGEQT 211
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ M+ N NG + N+GN E TVR+LAE++ + VS
Sbjct: 212 RSFCYVDDLVDGIIRMM-NTEGFNGPV-NLGN-DGEFTVRELAELVLKETGSVSKIVHKP 268
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ QQLG+ PK L + + T+ Y
Sbjct: 269 LPQ-------------DDPARRKPDLTLAKQQLGFEPKVPLVEGIRKTVEY 306
>gi|73538220|ref|YP_298587.1| NAD-dependent epimerase/dehydratase [Ralstonia eutropha JMP134]
gi|72121557|gb|AAZ63743.1| NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid
dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase
[Ralstonia eutropha JMP134]
Length = 350
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 167/381 (43%), Gaps = 66/381 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ L+E H +L +D + + I HLL ++
Sbjct: 9 VLVTGGAGFLGSHLCER-LVELGHDVLCVDNFYTGSKENISHLLP----------LYNFE 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D NLA +P Y + P+ T ++ A+ ++ R++
Sbjct: 58 LLRHDVTFPLYVEV-DQIYNLACPASPVHYQSDPVQTTKTSVHGAINMLGLAKRVKARIL 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG P + P R+ +G + +R Y K+ E
Sbjct: 117 QASTSEVYGD------PDNHPQRES-------------YWGHVNPVGRRACYDEGKRCAE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L ++G++ I R FN GPRM P++G RV++ F + L +PL L
Sbjct: 158 TLFMDYHRQHGVDVRIARIFNTYGPRMH-------PADG--RVVSNFISQALDGEPLTLY 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F ++ D ++ ++ ++E+ A A N+GNP E T+ +A + + S
Sbjct: 209 GDGSQTRSFCFVDDLVDGLMRLMESDAAATP--VNLGNP-CECTMHAIANEILQATGSAS 265
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
P DD +R PD+T+ L WNP T+L + L T+ Y
Sbjct: 266 AIETRPLPE-------------DDPRQRCPDITLARTLLQWNPATTLTEGLRLTVAYFVS 312
Query: 374 TYAE-AIKQAVAK---PVASS 390
AE A +Q A P+A S
Sbjct: 313 RRAERARRQKAANRAAPLAKS 333
>gi|423485730|ref|ZP_17462412.1| hypothetical protein IEU_00353 [Bacillus cereus BtB2-4]
gi|423491454|ref|ZP_17468098.1| hypothetical protein IEW_00352 [Bacillus cereus CER057]
gi|423501753|ref|ZP_17478370.1| hypothetical protein IEY_04980 [Bacillus cereus CER074]
gi|401152200|gb|EJQ59639.1| hypothetical protein IEY_04980 [Bacillus cereus CER074]
gi|401159798|gb|EJQ67178.1| hypothetical protein IEW_00352 [Bacillus cereus CER057]
gi|402440994|gb|EJV72972.1| hypothetical protein IEU_00353 [Bacillus cereus BtB2-4]
Length = 321
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 162/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + ++ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKNKYHNELMKE-----LRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +R +AE + ++ +S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKNIRVVAEDIKKLTKSIS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVHVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|365882557|ref|ZP_09421765.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp.
ORS 375]
gi|365289103|emb|CCD94296.1| putative sugar-nucleotide epimerase/dehydratase [Bradyrhizobium sp.
ORS 375]
Length = 351
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 53/350 (15%)
Query: 24 GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKHDSRL 83
G GFIGSH+C+ +L I A +++ ++++ F +++ L
Sbjct: 19 GGAGFIGSHICDTLLRRGDTVICADNLHTGSLRNI---RPLLNHPNFSFIEHDVREPLEL 75
Query: 84 EGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVY 143
EG + D NLA +P Y P+ T+ + + L +++ E + R++ ST EVY
Sbjct: 76 EGRL---DRVYNLACPASPPHYQQDPVGTMKTCVLGTLNLLELAREKSARILQASTSEVY 132
Query: 144 GKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIYAEGA 201
G D + P YV G + R Y K+ E L++
Sbjct: 133 G---------DPEVHPQPENYV----------GHVNTIGPRACYDEGKRAAETLMFDYQR 173
Query: 202 ENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRT 261
G+E + R FN GPRM E RV++ F LR P+ + G R+
Sbjct: 174 MYGIEIKVARIFNTYGPRMH---------ENDGRVVSNFIVQALRGAPITVYGSGSQTRS 224
Query: 262 FIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLA-EMMTEVYAKVSGEAALEE 320
F ++ D + + +++E+P G I N+GNPH E+++ +A E++T ++
Sbjct: 225 FCFVDDLVRGLEMLMESPGSVTGPI-NLGNPH-EMSIEAIAREVLTCTQSR--------- 273
Query: 321 PTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S+ EF DD +R P + + LGW P+ L LE+T+ Y
Sbjct: 274 -----STLEFKPLPVDDPKRRKPVIATAERLLGWRPQIPLRKGLEATIAY 318
>gi|406929110|gb|EKD64785.1| hypothetical protein ACD_50C00307G0016 [uncultured bacterium]
Length = 350
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 167/383 (43%), Gaps = 55/383 (14%)
Query: 5 SVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKI------LLETPHKILALDVYNDKIKHL 58
++R+ D + + T+ + G GF+G + I L P ++++LD Y K
Sbjct: 15 ALRIKKDAKILSGKTVLITGGSGFLGKYFLYTIWYLNKNLFSKPARVVSLDNYITGTKD- 73
Query: 59 LEPESQTGADRIQFHRLNIKHDSRLEGLIK-MADLTINLAAICTPADYNTRPLDTIYSNF 117
+ +F IKHD R +K D I+ A I +P Y PL+T+
Sbjct: 74 ---NPFVNDENFKF----IKHDVREPFYLKDRVDYIIHAAGIASPVFYMKYPLETLEVAT 126
Query: 118 IDALPVVKYC-SENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFG 176
++++ S+ K + FS+ EVYG DP + E+ +
Sbjct: 127 FGTKYMLEFAKSKKVKSFLFFSSSEVYGD-------------PDPNFVPTPENYPGNV-- 171
Query: 177 SIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRV 236
S R Y +K+L E L + L IVRPFN GP M RV
Sbjct: 172 SCTGPRACYDESKRLGETLCTIYHSLYKLPAKIVRPFNVYGPGM---------KTNDYRV 222
Query: 237 LACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEV 296
+ F + L+++PL + GG RTF YI DAI A ++ + NG ++NVGN NE+
Sbjct: 223 VPRFLTSALKKEPLPVHAGGNQTRTFCYISDAITAFFKVLL--SDKNGEVYNVGNDENEM 280
Query: 297 TVRQLAEMMTEVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNP 356
+ LA+ ++ ++ L+ +VD Y +G D +R PD+T I +LG+ P
Sbjct: 281 NMMTLAQTVSGLF-----RGKLQVKSVDYPLT--YPQG--DPRRRAPDLTKIRTELGYKP 331
Query: 357 KTSLWDLLESTLTYQHRTYAEAI 379
+L LE TL R Y E I
Sbjct: 332 MVNLKTGLERTL----RWYKEKI 350
>gi|50659024|gb|AAT80325.1| UDP-D-glucuronate decarboxylase [Hordeum vulgare]
Length = 408
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 152/358 (42%), Gaps = 61/358 (17%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76
P + + G GF+GSHL ++ LLE ++ +D + + A ++ R
Sbjct: 98 PRRVVVTGGAGFVGSHLVDR-LLEQGDSVIVVD-------NFFTGRKENVAHHLRNPRFE 149
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 150 LLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL 209
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIER 194
ST EVYG DP + KE +G + R Y K+ E
Sbjct: 210 TSTSEVYG---------------DPLEHPQKE----TYWGHVNPIGVRSCYDEGKRTAET 250
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L G+ I R FN GPRM G RV++ F LR+ P+ +
Sbjct: 251 LTMDYHRGGGVAVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRKHPMTVYG 301
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAKV 312
G+ R+F Y+ D + ++ ++E+ HI FN+GNP E T+ +LAE++ E
Sbjct: 302 DGKQTRSFQYVSDLVAGLMALMES-----DHIGPFNLGNP-GEFTMLELAEVVKE----- 350
Query: 313 SGEAALEEPTVD-VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
T+D +S+ EF DD R PD+T Q LGW PK SL + L +T
Sbjct: 351 ---------TIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVT 399
>gi|242057225|ref|XP_002457758.1| hypothetical protein SORBIDRAFT_03g012980 [Sorghum bicolor]
gi|241929733|gb|EES02878.1| hypothetical protein SORBIDRAFT_03g012980 [Sorghum bicolor]
Length = 429
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 168/386 (43%), Gaps = 75/386 (19%)
Query: 3 GASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-----NDKIKH 57
G V L L R ++ + + G GF+GSHL ++ L+E ++ +D + + H
Sbjct: 96 GGKVPLGLRRRALR---VLVTGGAGFVGSHLVDR-LVERGDSVIVVDNFFTGRKGNVAHH 151
Query: 58 LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNF 117
L P + I+HD +E ++ D +LA +P Y P+ TI +N
Sbjct: 152 LQNPRFEV-----------IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPIKTIKTNV 199
Query: 118 IDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
+ L ++ R + ST EVYG PL Q P + +P
Sbjct: 200 VGTLNMLGLAKRIGARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI---- 244
Query: 178 IEKQRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR 235
R Y K+ E L Y GA LE I R FN GPRM G R
Sbjct: 245 --GVRSCYDEGKRTAETLTMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------R 291
Query: 236 VLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPH 293
V++ F LR++PL + G+ R+F Y+ D +E ++ ++E HI FN+GNP
Sbjct: 292 VVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMKLME-----GDHIGPFNLGNP- 345
Query: 294 NEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQL 352
E T+ +LA+++ + T+D ++ EF DD KR PD++ + L
Sbjct: 346 GEFTMLELAKVVQD--------------TIDPEARIEFRPNTADDPHKRKPDISRAKELL 391
Query: 353 GWNPKTSLWDLLESTLT-YQHRTYAE 377
GW PK L + L +T ++ R + +
Sbjct: 392 GWEPKVPLREGLPRMVTDFRKRIFGD 417
>gi|398349098|ref|ZP_10533801.1| nucleoside-diphosphate-sugar epimerase [Leptospira broomii str.
5399]
Length = 311
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 158/352 (44%), Gaps = 52/352 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIGSHLCE+ L+ H+++ LD ++ K +E R + R +I
Sbjct: 5 VLVTGGAGFIGSHLCER-LINQGHEVICLDNFHTGRKENVE--KLLNNSRFELIRHDITE 61
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
RLE D N A +P Y + + TI +N + + + R++ ST
Sbjct: 62 PIRLE-----VDKIYNFACPASPVHYQSNAIKTIKTNVLGTMNALGIAKRVKARILQAST 116
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q +Y+ + +P R Y K++ E L +
Sbjct: 117 SEVYGN------PLEHP--QKESYW---GNVNPIGI------RSCYDEGKRVAETLCFDY 159
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ ++ ++R FN GPRM P +G RV++ F L + + + G
Sbjct: 160 HRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFVVQALAGKDITIYGDGSQT 210
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D +E ++ M++ P N+GN E TV++LAE++ +
Sbjct: 211 RSFCYVDDLVEGIIKMMDTPDFIGP--VNLGN-DGEFTVKELAELVIQ------------ 255
Query: 320 EPTVDVSSKEFYGE-GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ SSK Y DD +R PD+++ Q+LG+ PK +L D + T+ Y
Sbjct: 256 --EIGSSSKIVYKPLPQDDPSRRKPDLSLARQKLGYEPKVALKDGIRKTVEY 305
>gi|393215973|gb|EJD01464.1| NAD-binding protein [Fomitiporia mediterranea MF3/22]
Length = 459
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 167/378 (44%), Gaps = 60/378 (15%)
Query: 14 PIKPVT------ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPES 63
P+K +T I + G GF+GSHL ++++L H++ LD + + H +
Sbjct: 127 PVKLLTPSHRKRILVTGGAGFVGSHLVDRLML-LGHEVTVLDNFFTGSRTNVSHWI---- 181
Query: 64 QTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPV 123
G + ++HD +E + D +LA +P Y + P+ TI ++FI L +
Sbjct: 182 --GHPNFEM----VRHDV-VEPFMIECDQIYHLACPASPPHYQSNPVKTIKTSFIGTLNM 234
Query: 124 VKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQ 181
+ R + ST EVYG D + P Y +G++
Sbjct: 235 LGLAKRTKARFLISSTSEVYG---------DPEVHPQPETY----------WGNVNPIGV 275
Query: 182 RWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 241
R Y K++ E L Y ++G++ + R FN GPRM+ P++G RV++ F
Sbjct: 276 RACYDEGKRVAETLTYGFHHQDGVDVRVARIFNTYGPRMN-------PADG--RVVSNFI 326
Query: 242 NNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQL 301
LR + L + GG+ R+F YI D I+ ++ + + N+GN E T+ Q
Sbjct: 327 VQALRGEDLTVYGGGKQTRSFQYIHDLIDGLIACMNSDFNEP---INIGNS-EEFTIAQF 382
Query: 302 AEMMTEVYAKVSGEAALEEPT-VDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
A+++ EV KV E +E V V + DD +R PD T + LGW P+ ++
Sbjct: 383 ADVVREVVEKVQKEDGVENAKRVGVRN---LAMPKDDPQQRKPDTTRAKEVLGWQPRWTV 439
Query: 361 WDLLESTLTYQHRTYAEA 378
LE + Y AE
Sbjct: 440 RMGLEEMVRYYKAKMAEG 457
>gi|115452245|ref|NP_001049723.1| Os03g0278000 [Oryza sativa Japonica Group]
gi|18447934|dbj|BAB84334.1| UDP-glucuronic acid decarboxylase [Oryza sativa Japonica Group]
gi|108707478|gb|ABF95273.1| RmlD substrate binding domain containing protein, expressed [Oryza
sativa Japonica Group]
gi|108707479|gb|ABF95274.1| RmlD substrate binding domain containing protein, expressed [Oryza
sativa Japonica Group]
gi|113548194|dbj|BAF11637.1| Os03g0278000 [Oryza sativa Japonica Group]
gi|125585790|gb|EAZ26454.1| hypothetical protein OsJ_10342 [Oryza sativa Japonica Group]
gi|215704795|dbj|BAG94823.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765584|dbj|BAG87281.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 350
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 155/345 (44%), Gaps = 50/345 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ H+++ D + K L + G R + I+H
Sbjct: 37 ILVTGGAGFIGSHLVDKLMENEKHEVIVADNFFTGSKDNL--KKWIGHPRFEL----IRH 90
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D L+++ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 91 DVTQPLLVEV-DQIYHLACPASPIFYKHNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 149
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q AY+ + +P R Y K++ E L++
Sbjct: 150 SEVYGD------PLEHP--QTEAYW---GNVNPI------GVRSCYDEGKRVAETLMFDY 192
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 193 HRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAVRGEPLTVQKPGTQT 243
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D + ++ ++ N N+GNP E T+ +LAE + E L
Sbjct: 244 RSFCYVADMVNGLIKLMNG---DNTGPINLGNP-GEFTMLELAENVKE----------LI 289
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
P V V+ E DD +R PD+T + LGW PK L D L
Sbjct: 290 NPEVTVTMTE---NTPDDPRQRKPDITKAKEVLGWEPKIVLRDGL 331
>gi|163938434|ref|YP_001643318.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis
KBAB4]
gi|423515282|ref|ZP_17491763.1| hypothetical protein IG7_00352 [Bacillus cereus HuA2-4]
gi|423602035|ref|ZP_17578035.1| hypothetical protein III_04837 [Bacillus cereus VD078]
gi|423671877|ref|ZP_17646881.1| hypothetical protein IKO_05155 [Bacillus cereus VDM034]
gi|423677662|ref|ZP_17652597.1| hypothetical protein IKS_05198 [Bacillus cereus VDM062]
gi|163860631|gb|ABY41690.1| NAD-dependent epimerase/dehydratase [Bacillus weihenstephanensis
KBAB4]
gi|401167408|gb|EJQ74692.1| hypothetical protein IG7_00352 [Bacillus cereus HuA2-4]
gi|401227899|gb|EJR34427.1| hypothetical protein III_04837 [Bacillus cereus VD078]
gi|401290718|gb|EJR96407.1| hypothetical protein IKO_05155 [Bacillus cereus VDM034]
gi|401306132|gb|EJS11641.1| hypothetical protein IKS_05198 [Bacillus cereus VDM062]
Length = 321
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 162/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + ++ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYEVTIVDNFYKGKNKYHNELMKE-----LRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSVELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK + P ++ ++G+ K RWSYA K L E L
Sbjct: 120 SEVYGKG-------EPPFSEE----------GDRLYGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGDDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +R +AE + ++ +S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKNIRVVAEDIKKLTKSIS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVHVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|259418578|ref|ZP_05742495.1| UDP-glucuronic acid decarboxylase 1 [Silicibacter sp. TrichCH4B]
gi|259344800|gb|EEW56654.1| UDP-glucuronic acid decarboxylase 1 [Silicibacter sp. TrichCH4B]
Length = 334
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 158/360 (43%), Gaps = 65/360 (18%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHRL 75
I + G GF+G+HLC++ L+ H+++ +D + I HLL+ E+ T
Sbjct: 15 IMVAGGAGFVGAHLCQR-LIHDGHEVICIDNFQTGRMCNIVHLLDDENFTC--------- 64
Query: 76 NIKHDSRLEGL--IKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
+ HD ++ L + D NLA +P Y P+ T +N AL +++ +++
Sbjct: 65 -VSHDI-VDPLPDLGQVDEIYNLACAASPKKYQVDPIHTFKTNVFGALNLLELALQHDAT 122
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
++ ST EVYG P+ +P Q Y P R Y K+ +E
Sbjct: 123 ILQSSTSEVYGD------PEITP--QAETYRGNVNTMGP---------RSCYDEGKRAVE 165
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L Y G + + R FN GP M P +G RV++ F L P+ +
Sbjct: 166 TLFYDFHHARGAKTRVARIFNTYGPGM-------CPQDG--RVISNFVTQALSGVPVTVY 216
Query: 254 DGGQSQRTFIYIKDAIEAVLLMI---ENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
G R+F ++ D +E ++ ++ + P +A +N+GNP E TVR++A+ + E
Sbjct: 217 GDGSQTRSFCFVSDLVEGLMALMACEDAPVQA----YNLGNP-GEFTVREVAQHIIETLG 271
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
S A L+ P DD +R PD++ L W PK SL D L T+ Y
Sbjct: 272 SKSEVAYLDLPV-------------DDPRQRCPDISRAKADLNWAPKVSLADGLRMTVPY 318
>gi|326502218|dbj|BAJ95172.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 152/358 (42%), Gaps = 61/358 (17%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN 76
P + + G GF+GSHL ++ LLE ++ +D + + A ++ R
Sbjct: 98 PRRVVVTGGAGFVGSHLVDR-LLEQGDSVIVVD-------NFFTGRKENVAHHLRNPRFE 149
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
+ +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 150 LLRHDVVEPILLEVDRIYHLACPASPVHYKYNPIKTIKTNVMGTLNMLGLAKRIGARFLL 209
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIER 194
ST EVYG DP + KE +G + R Y K+ E
Sbjct: 210 TSTSEVYG---------------DPLEHPQKE----TYWGHVNPIGVRSCYDEGKRAAET 250
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L G+ I R FN GPRM G RV++ F LR+ P+ +
Sbjct: 251 LTMDYHRGGGVAVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRKHPMTVYG 301
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAKV 312
G+ R+F Y+ D + ++ ++E+ HI FN+GNP E T+ +LAE++ E
Sbjct: 302 DGKQTRSFQYVSDLVAGLMALMES-----DHIGPFNLGNP-GEFTMLELAEVVKE----- 350
Query: 313 SGEAALEEPTVD-VSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
T+D +S+ EF DD R PD+T Q LGW PK SL + L +T
Sbjct: 351 ---------TIDPMSTIEFKPNTADDPHMRKPDITKAKQMLGWEPKVSLKEGLPLMVT 399
>gi|288916930|ref|ZP_06411302.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
gi|288351639|gb|EFC85844.1| NAD-dependent epimerase/dehydratase [Frankia sp. EUN1f]
Length = 338
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 159/370 (42%), Gaps = 66/370 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLL-EPESQTGADRIQFHR 74
+ + G GF+GSHLC+++L E H ++ LD + + + HL EP R Q H
Sbjct: 3 VVITGGAGFVGSHLCDRLLTEG-HHVICLDNFLTGRHSNVAHLQSEP-------RFQLHC 54
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++ ++G + D ++ A+ +P DY PL+T+ + L ++ ++ R
Sbjct: 55 QDVTDSVEVDGRV---DAVLHFASPASPVDYQNFPLETLRVGALGTLHTLELAEKHGARF 111
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLI 192
+ ST EVYG DPA + E +G++ R Y AK+
Sbjct: 112 VLASTSEVYG---------------DPAVHPQPE----TYWGNVNPIGPRSMYDEAKRYS 152
Query: 193 ERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKL 252
E L A A G I+R FN GPRM G R + F L P+ +
Sbjct: 153 EALTTAFRATKGTNTAIIRIFNTYGPRMRQDDG---------RAIPTFVTQALNGYPVTV 203
Query: 253 VDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKV 312
G+ R+ Y+ D +E ++ + A N+GNPH E++V +LA ++ ++
Sbjct: 204 AGDGRQTRSVCYVDDLVEGIVRTL---ASGVAGPLNIGNPH-EMSVLELARLVIDL---- 255
Query: 313 SGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
+ P V F DD R PD+ +LGWNP + + L T+++
Sbjct: 256 ---CGADVPIV------FVPRPGDDPMVRQPDILRARTELGWNPTVDIQNGLLRTISWFR 306
Query: 373 RTYAEAIKQA 382
AEA+ A
Sbjct: 307 ---AEAVAAA 313
>gi|296124024|ref|YP_003631802.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM
3776]
gi|296016364|gb|ADG69603.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM
3776]
Length = 313
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 157/360 (43%), Gaps = 66/360 (18%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYND----KIKHLLEPESQTGADRIQFHR 74
T+ + G GF+GSH+C++ L+E K++ LD + I HL D QF
Sbjct: 4 TVLVTGGAGFVGSHICDR-LIERGDKVICLDNFFTGRMANISHL--------KDHPQFQL 54
Query: 75 LN--IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
++ I H L+ AD N+A +P Y P+ TI ++ + + ++
Sbjct: 55 VDHDIVHPITLD-----ADRIYNMACPASPVAYQYNPIKTIKTSTLGMINMLGLAKRCKA 109
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQ 190
R++ ST EVYG DP + ED +G + R Y K+
Sbjct: 110 RILQASTSEVYG---------------DPVVHPQTED----YWGHVNPLGPRSCYDEGKR 150
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
+ E L + LE IVR FN GPRMD P++G RV++ F L+ +PL
Sbjct: 151 VAESLCMNYHLAHQLEIRIVRIFNTYGPRMD-------PNDG--RVISNFITQALKGEPL 201
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
+ G R+F Y+ D + ++ +++ N+GNP E T+ +LAE +
Sbjct: 202 TVYGDGSQTRSFCYVDDLVRGIMALMDQGIHTGP--VNIGNP-GEYTMLELAEQVL---- 254
Query: 311 KVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
K +G S+ +F DD +R PD+T L W P+ L + LE T+ Y
Sbjct: 255 KATGSK---------STIDFRPLPQDDPKQRCPDITRAKAMLKWEPQIPLAEGLEKTVHY 305
>gi|383762504|ref|YP_005441486.1| NAD-dependent epimerase/dehydratase family protein [Caldilinea
aerophila DSM 14535 = NBRC 104270]
gi|381382772|dbj|BAL99588.1| NAD-dependent epimerase/dehydratase family protein [Caldilinea
aerophila DSM 14535 = NBRC 104270]
Length = 311
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 153/357 (42%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLC+++L E H ++A+D D I HL G R QF
Sbjct: 3 ILVTGGAGFLGSHLCDRLLAEG-HDVIAMDNLITGTTDNIAHL------AGNRRFQFIHH 55
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + ++G + D ++ A+ +P DY P+ T+ + + R +
Sbjct: 56 DVTNYIYIKGPL---DAILHFASPASPIDYMELPIQTLKVGSLGTHNALGLAMAKGARFL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P P Q +Y+ P R Y AK+ E +
Sbjct: 113 LASTSEVYGD------PLVHP--QPESYWGNVNPIGP---------RGVYDEAKRFAEAM 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +GL+ IVR FN GPRM G RV+ F + LRR+PL +
Sbjct: 156 TMAYHRYHGLDTRIVRIFNTYGPRMRLRDG---------RVVPNFVSQALRREPLTVYGD 206
Query: 256 GQSQRTFIYIKDAIEAV--LLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G+ R+F Y+ D IE + LLM + N+GNP E+T+ + A ++ E+ +
Sbjct: 207 GRQTRSFCYVSDLIEGIYRLLMSDEVEPV-----NIGNP-TEMTILEFATLINELTGNPA 260
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
G P DD +R PD++ + LGW PK L + T+ +
Sbjct: 261 GIRFEPLPK-------------DDPKQRQPDISKARRVLGWEPKVDLRTGMTQTVEW 304
>gi|307592061|ref|YP_003899652.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822]
gi|306985706|gb|ADN17586.1| NAD-dependent epimerase/dehydratase [Cyanothece sp. PCC 7822]
Length = 319
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 156/354 (44%), Gaps = 52/354 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GFIG+HL E++ T +++ D + L+ S +I+ ++
Sbjct: 6 VLITGGAGFIGTHLAERLSQYT--EVVLFDSFRRNSLSLIP--SLKEHPKIKVISGDVLD 61
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFS 138
S + + D I+LAAI + Y L T+ N + +++ ++ K +HFS
Sbjct: 62 PSSIRLALDGVDTVIHLAAIAGVSSYYQESLQTLRVNILGTSNLLEAAAKQKIKMFVHFS 121
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER--LI 196
T E+YG A +V ++ SP I GS+ +RW YA +K E L
Sbjct: 122 TSEIYGSN---------------ALWV--DEESPYIIGSVSDRRWVYATSKLAGENFSLR 164
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
YAE + T VRPFN GPR EG ++ F + QP+K+ G
Sbjct: 165 YAEAFD--FACTTVRPFNIYGPRQ--------VGEGA---ISNFCRAISSGQPMKIYGDG 211
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+ R + YI D ++AV ++++ P A G FN+GNP T +LA+ M AK+ EA
Sbjct: 212 SAIRAWCYISDLVDAVEMILKIP-DAAGQAFNIGNPSAVATTLELAQQM----AKIIPEA 266
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ V S + RIP + Q LG+ PK L L T +
Sbjct: 267 TFKYEQVKRS----------EIKARIPSINKAQQLLGYEPKIGLETGLRRTFEW 310
>gi|218960444|ref|YP_001740219.1| Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)
[Candidatus Cloacamonas acidaminovorans]
gi|167729101|emb|CAO80012.1| Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase)
[Candidatus Cloacamonas acidaminovorans str. Evry]
Length = 319
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 160/360 (44%), Gaps = 45/360 (12%)
Query: 18 VTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNI 77
+ I + G GFIGSHL E++L E + ++ +++++ + D+ FH LNI
Sbjct: 1 MKILITGGAGFIGSHLAERLLQEGNEVYVIDNLSTGRLENI-----EAFKDKPNFH-LNI 54
Query: 78 K---HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+ L+ LI + +LAA PL ++ +N + V+++C++ +
Sbjct: 55 GSVLNRELLDKLISNVEQVYHLAAAVGVKYIIENPLLSLKTNIMGTDNVLEFCNKYKAKA 114
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST E+YGK Q P + + GS RW Y C+K + E
Sbjct: 115 LIASTSEIYGKN-----------EQIPF-----SETDDRLLGSTHISRWGYGCSKAIDEF 158
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L A E L IVR FN +GPR G+ VL F L QPL +
Sbjct: 159 LALAYFREKKLPVVIVRCFNTVGPRQTGQYGM---------VLPKFIKAALLNQPLVIYG 209
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEV-YAKVS 313
G+ R F + D ++A + ++ P A G IFNVG + +++ LA+ + ++ ++K
Sbjct: 210 TGEQTRCFADVSDVVDAFIKLMNTPECA-GEIFNVGTTES-ISITDLAQKVKDMCHSKSR 267
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
E E + EG++D R PD+T I +GW PK L ++ + Y +
Sbjct: 268 IEYMRYEDA--------FEEGFEDMMHRQPDLTKIKNFIGWEPKHKLDHIISRIIDYYEK 319
>gi|296122213|ref|YP_003629991.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM
3776]
gi|296014553|gb|ADG67792.1| NAD-dependent epimerase/dehydratase [Planctomyces limnophilus DSM
3776]
Length = 326
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 159/355 (44%), Gaps = 38/355 (10%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C++ G GFIGSH+ + LL H + LD + + L P R + +I
Sbjct: 4 CLVTGGAGFIGSHMT-RALLNAGHDVTILDNLSTGQEVNLRPFRD--HPRFKLTIGSITD 60
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
L ++ ++ +LAA P+ TI +N +++ +N R+ ST
Sbjct: 61 SVLLSEVMLGQEIVFHLAAAVGVKLVADDPVRTIQTNIYPTEELLRLAVQNRCRVFMAST 120
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK PK+ +D FG K RW+Y C+K + E L A
Sbjct: 121 SEVYGKN-----PKERWTEEDDLQ-----------FGPTSKPRWAYGCSKAIDEFLSLAY 164
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ L I R FN +GP I VPR F + L+ P+ + D G
Sbjct: 165 HRKYDLPVVIGRFFNVVGPHQ-----IGHYGMVVPR----FVDQALKGGPIVIYDDGSQV 215
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F ++++ + +V+ ++ PA A G +FN+G+ V+VRQLAE V A V ++
Sbjct: 216 RCFGHVEEVVRSVIDLMHTPA-AFGKVFNIGS-DQPVSVRQLAE---RVIALVGRPCEIK 270
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 374
+ E YG ++D +R+PD+T + LG P +L D+L+ + ++ +
Sbjct: 271 H----IPYTEAYGADFEDVQRRVPDLTRLESTLGRKPVRTLDDILKDIIQWKRSS 321
>gi|334847980|gb|AEH04658.1| UDP-glucuronate decarboxylase [Camellia oleifera]
Length = 340
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 156/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++++ ++++ D Y K L+ G R + I+H
Sbjct: 29 ILVTGGAGFIGSHLVDRLMQNEKNEVIVADNYFTGSKDNLK--QWIGHPRFEL----IRH 82
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N + L ++ R++ ST
Sbjct: 83 DV-TEPLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVMGTLNMLGLAKRVGARILLTST 141
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG DP + ED +G++ R Y K++ E L++
Sbjct: 142 SEVYG---------------DPLVHPQTED----YWGNVNPIGVRSCYDEGKRVAETLMF 182
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 183 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRDEPLTVQLPGT 233
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E G I N+GNP E T+ +LAE + E
Sbjct: 234 QTRSFCYVSDMVDGLIRLME--GNDTGPI-NIGNP-GEFTMLELAENVKE---------- 279
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V + + E DD +R PD+T + LGW PK L D L
Sbjct: 280 LINPDVKIITVE---NTPDDPRQRKPDITKAKELLGWEPKIKLRDGL 323
>gi|254471322|ref|ZP_05084724.1| UDP-glucuronic acid decarboxylase 1 [Pseudovibrio sp. JE062]
gi|211959468|gb|EEA94666.1| UDP-glucuronic acid decarboxylase 1 [Pseudovibrio sp. JE062]
Length = 331
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 164/372 (44%), Gaps = 66/372 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS+L EK LLE H++L LD + ++HLL D +F L
Sbjct: 10 ILVTGGSGFLGSYLSEK-LLEAGHEVLCLDNFFTGTRMNVEHLL--------DHKRFELL 60
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD + L D NLA +P Y P+ T ++ + A+ ++ +++
Sbjct: 61 --RHDV-CQPLFVEVDEIYNLACPASPVHYQFDPVQTTKTSVLGAINMLGLAKRVKAKIL 117
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST E+YG D + P Y +G++ R Y K+ E
Sbjct: 118 QASTSEIYG---------DPQVHPQPEEY----------WGNVNPIGVRSCYDEGKRCAE 158
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L Y +N + ++R FN GPRM P++G RV++ F L +P+ L
Sbjct: 159 TLFYDYYRQNNINIRVMRIFNTYGPRMH-------PNDG--RVVSNFIMQALMNKPITLY 209
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y D ++ ++ ++ P + I N+GNP E T++QLAE++ E+ S
Sbjct: 210 GDGMQTRSFCYRDDLVDGMIKLMNAPDHISMPI-NIGNP-KEFTIKQLAELVLELTG--S 265
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
+ EP DD +R PD+T LGW P T L + L T+ Y +
Sbjct: 266 KSRIIREPLPQ-----------DDPLQRKPDITRARDYLGWRPTTELREGLGKTIQYFEQ 314
Query: 374 TY-----AEAIK 380
AEA+K
Sbjct: 315 LLSKHGEAEAVK 326
>gi|170742162|ref|YP_001770817.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46]
gi|168196436|gb|ACA18383.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46]
Length = 318
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 153/356 (42%), Gaps = 57/356 (16%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHR 74
+I + G GF+GSHLCE L+E H++L +D + ++HLL+ R + R
Sbjct: 9 SILVTGGAGFLGSHLCES-LIEQGHEVLCVDNFFTGARQNVEHLLK------NPRFELLR 61
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
+I +E D NLA +P Y P+ T ++ + + V+ ++
Sbjct: 62 HDITSPLYVE-----VDEIYNLACPASPVHYQFDPVQTTKTSVLGTINVLGLAKRVKAKV 116
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG P+ P Q Y+ P R Y K+ E
Sbjct: 117 LQASTSEVYGD------PEMHP--QAEHYWGRVNPIGP---------RSCYDEGKRCAET 159
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++GL + R FN GPRM P +G RV++ F L + + L
Sbjct: 160 LFFDYHRQHGLPIKVARIFNTYGPRMH-------PDDG--RVVSNFVVQALSNKDITLYG 210
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G+ R+F Y+ D ++ ++ ++E + G I N+GNP E TVR LAE++ E+ S
Sbjct: 211 DGRQTRSFCYVDDLVQGLIALMETDSTVTGPI-NLGNP-GEFTVRDLAELVVELTGSRSE 268
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ + LGW P L + L T+ Y
Sbjct: 269 IVRRPLPQ-------------DDPRQRKPDIDRAKKVLGWQPTIDLREGLIRTIEY 311
>gi|449439990|ref|XP_004137768.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis
sativus]
gi|449517780|ref|XP_004165922.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Cucumis
sativus]
Length = 438
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 164/370 (44%), Gaps = 74/370 (20%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHL +K L+E ++ +D + D + H L G R +
Sbjct: 125 IVVTGGAGFVGSHLVDK-LIERGDDVIVIDNFFTGRKDNLVHHL------GNPRFEL--- 174
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 175 -IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRIGARFL 232
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KE +G++ +R Y K+ E
Sbjct: 233 LTSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGERSCYDEGKRTAE 273
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GAE +E I R FN GPRM G RV++ F +R+QPL
Sbjct: 274 TLTMDYHRGAE--VEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQAIRKQPLT 322
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D + ++ ++E H+ FN+GNP E T+ +LA+++ E
Sbjct: 323 VYGDGKQTRSFQYVSDLVNGLVALMEGE-----HVGPFNLGNP-GEFTMMELAQVVKE-- 374
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
T+D S+ EF DD KR PD++ L W PK SL + L +
Sbjct: 375 ------------TIDPSATIEFRPNTADDPHKRKPDISKAKSLLNWEPKISLREGLPLMV 422
Query: 369 T-YQHRTYAE 377
+ +Q R E
Sbjct: 423 SDFQKRILNE 432
>gi|158313510|ref|YP_001506018.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
gi|158108915|gb|ABW11112.1| NAD-dependent epimerase/dehydratase [Frankia sp. EAN1pec]
Length = 319
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 153/355 (43%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLC+++LL+ +++ +D + ++HLL DR F L
Sbjct: 3 VVVAGGAGFLGSHLCDRLLLDG-EEVVCIDNFLTGRKSNVEHLL--------DRPGFELL 53
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
R+E + D + A+ +P DY P++T+ + L + R +
Sbjct: 54 EQDVAERVE-VAGTVDAVLEFASPASPLDYARYPIETLKAGAHGTLNTLDLARAKGARFL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P P Q+ +Y+ P R Y AK+ E L
Sbjct: 113 LASTSEVYGD------PLVHP--QEESYWGHVNPIGP---------RSMYDEAKRFAEAL 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +GL+ I+R FN GPRM G R + F + LR +P+ +
Sbjct: 156 TTAYRNRHGLDTAIIRIFNTYGPRMRTDDG---------RAIPAFVSQALRGEPVTVAGD 206
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+ Y+ D +E ++ M+ + N+GNPH E+T+ A ++ E+ + +
Sbjct: 207 GMQTRSVCYVDDLVEGIVRMLRSGLPGP---VNLGNPH-EMTIIDTARLVVEL---IGSD 259
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
A + F DD R PD+T+ QQLGW P + D L T+ +
Sbjct: 260 APIT----------FVPRPGDDPMVRRPDITLARQQLGWEPVVDVRDGLVRTIEW 304
>gi|255533495|ref|YP_003093867.1| NAD-dependent epimerase/dehydratase [Pedobacter heparinus DSM 2366]
gi|255346479|gb|ACU05805.1| NAD-dependent epimerase/dehydratase [Pedobacter heparinus DSM 2366]
Length = 329
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 162/370 (43%), Gaps = 59/370 (15%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALD--VYND--KIKHLLEPESQTGADRI 70
+K + + GA GF+GSHLC++ + E H ++A+D + D I+HL G +
Sbjct: 1 MKTKRVLITGAAGFLGSHLCDRFIKEGYH-VIAMDNLITGDLQNIQHLF------GLENF 53
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
+F ++ + G + D ++ A+ +P DY P+ T+ + ++
Sbjct: 54 EFAHHDVSKYVYVSGEL---DYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLAKNK 110
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
N R++ ST EVYG P +P Q Y+ P R Y AK+
Sbjct: 111 NARMLIASTSEVYGD------PSVNP--QPEEYWGNVNPVGP---------RGVYDEAKR 153
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E + A +GLE IVR FN GPRM G RVL F LR + L
Sbjct: 154 FQEAMTMAYHTFHGLETRIVRIFNTYGPRMRLNDG---------RVLPAFIGQALRGEDL 204
Query: 251 KLVDGGQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
+ G R+F Y+ D IE + L++ + A N+GNP +E+T+RQ E + ++
Sbjct: 205 TVFGDGSQTRSFCYVDDLIEGIYRLLLSDYALP----VNIGNP-DEITIRQFGEEIIKL- 258
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
S + L++ V DD +R PD+T LGW PK S + L+ T
Sbjct: 259 TGTSQKLVLKDLPV------------DDPKQRRPDITKARAILGWEPKVSRAEGLKITYE 306
Query: 370 YQHRTYAEAI 379
Y EA+
Sbjct: 307 YFKSLPQEAL 316
>gi|356550259|ref|XP_003543505.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]
Length = 348
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 154/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL ++++ ++++ D Y K L+ G R + I+H
Sbjct: 37 ILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLK--KWIGHPRFEL----IRH 90
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D E L+ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 91 DV-TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 149
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG D + P Y +G++ R Y K++ E L++
Sbjct: 150 SEVYG---------DPLVHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 190
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F LR +PL + G
Sbjct: 191 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQALRGEPLTVQCPGT 241
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++ +N N+GNP E T+ +LAE + E
Sbjct: 242 QTRSFCYVSDLVDGLIRLM---GGSNTGPINLGNP-GEFTMTELAETVKE---------- 287
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V++ E DD +R PD+T + LGW PK L D L
Sbjct: 288 LINPGVEIKMVE---NTPDDPRQRKPDITKAKELLGWEPKVKLRDGL 331
>gi|255533805|ref|YP_003094177.1| NAD-dependent epimerase/dehydratase [Pedobacter heparinus DSM 2366]
gi|255346789|gb|ACU06115.1| NAD-dependent epimerase/dehydratase [Pedobacter heparinus DSM 2366]
Length = 329
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 165/380 (43%), Gaps = 59/380 (15%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALD--VYND--KIKHLLEPESQTGADRI 70
+K + + GA GF+GSHLC++ + E H ++A+D + D I+HL G +
Sbjct: 1 MKTKRVLITGAAGFLGSHLCDRFIKEGYH-VIAMDNLITGDLQNIQHLF------GLENF 53
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
+F ++ + G + D ++ A+ +P DY P+ T+ + ++
Sbjct: 54 EFAHHDVSKYVYVSGEL---DYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLAKNK 110
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
N R++ ST EVYG P +P Q Y+ P R Y AK+
Sbjct: 111 NARMLIASTSEVYGD------PSVNP--QPEEYWGNVNPVGP---------RGVYDEAKR 153
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E + A +GLE IVR FN GPRM G RVL F LR + L
Sbjct: 154 FQEAMTMAYHTFHGLETRIVRIFNTYGPRMRLNDG---------RVLPAFIGQALRGEDL 204
Query: 251 KLVDGGQSQRTFIYIKDAIEAVL-LMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVY 309
+ G R+F Y+ D IE + L++ + A N+GNP +E+T+RQ E + ++
Sbjct: 205 TVFGDGSQTRSFCYVDDLIEGIYRLLLSDYALP----VNIGNP-DEITIRQFGEEIIKL- 258
Query: 310 AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
S + L++ V DD +R PD+T LGW PK S + L+ T
Sbjct: 259 TGTSQKLVLKDLPV------------DDPKQRRPDITKARAILGWEPKVSRAEGLKITYE 306
Query: 370 YQHRTYAEAIKQAVAKPVAS 389
Y EA+ K ++
Sbjct: 307 YFKSLPQEALTNKEHKDFST 326
>gi|423461487|ref|ZP_17438284.1| hypothetical protein IEI_04627 [Bacillus cereus BAG5X2-1]
gi|401136625|gb|EJQ44212.1| hypothetical protein IEI_04627 [Bacillus cereus BAG5X2-1]
Length = 321
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYGVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKEKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-DNEKSIKEVAEVIKKLTKSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+ + + + + + + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVAKLRELVQFQAEVTWEEGLKETIKW 314
>gi|47567274|ref|ZP_00237988.1| UDP-glucose 4-epimerase [Bacillus cereus G9241]
gi|47556117|gb|EAL14454.1| UDP-glucose 4-epimerase [Bacillus cereus G9241]
Length = 321
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 161/352 (45%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYDVTIVDNFYKGKNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 QNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAICKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FIRAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE ++++A ++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKCIKEVAAVIKKLTNSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+T + + + + K + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVTKLRELVQFQAKVTWEQGLKETIKW 314
>gi|357121508|ref|XP_003562461.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Brachypodium
distachyon]
Length = 448
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 164/377 (43%), Gaps = 62/377 (16%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPH--KILALDVYNDKIKHLLEPESQTGADRIQFH 73
K + + + G GF+GSHL ++ LL P ++ +D + K + +G R +
Sbjct: 125 KGLRVLVTGGAGFVGSHLVDR-LLSRPEVTSVIVVDNFFTGQKSNVAHHVASGDPRFEL- 182
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R
Sbjct: 183 ---IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR 238
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
+ ST EVYG + Q P + +P R Y K+ E
Sbjct: 239 FLLTSTSEVYGDPL-----------QHPQVETYWGNVNPI------GVRSCYDEGKRTAE 281
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA LE I R FN GPRM G RV++ F LR++PL
Sbjct: 282 TLTMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLT 330
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++ +V
Sbjct: 331 VYGDGKQTRSFQYVSDLVEGLIKLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQDV- 383
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTL 368
+D +++ EF DD KR PD+T LGW PK L L +
Sbjct: 384 -------------IDPNARIEFRPNTADDPHKRKPDITRAKDLLGWEPKVPLAKGLPLMV 430
Query: 369 T-YQHRTYAEAIKQAVA 384
++ R + + IK A
Sbjct: 431 NDFRSRIFGDQIKPDAA 447
>gi|115452277|ref|NP_001049739.1| Os03g0280800 [Oryza sativa Japonica Group]
gi|45421834|dbj|BAD12491.1| UDP-glucuronic acid decarboxylase [Oryza sativa Japonica Group]
gi|113548210|dbj|BAF11653.1| Os03g0280800 [Oryza sativa Japonica Group]
Length = 396
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 169/388 (43%), Gaps = 75/388 (19%)
Query: 2 AGASVRLDLDGRPIKPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKH 57
AS RL + R P+ + + G GF+GSHL +++L I+ + + + +H
Sbjct: 70 VAASRRLPVGVRK-PPLRVVVTGGAGFVGSHLVDELLARGDSVIVVDNFFTGRKENVARH 128
Query: 58 LLEPESQTGADRIQFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNF 117
L +P + I+HD +E ++ D +LA +P Y P+ TI +N
Sbjct: 129 LADPRFEL-----------IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPIKTIKTNV 176
Query: 118 IDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGS 177
+ L ++ R + ST EVYG DP + KE +G
Sbjct: 177 MGTLNMLGLAKRVGARFLLTSTSEVYG---------------DPLEHPQKE----SYWGH 217
Query: 178 IEK--QRWSYACAKQLIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV 233
+ R Y K+ E L Y GA G+E I R FN GPRM G
Sbjct: 218 VNPIGVRSCYDEGKRTAETLTMDYHRGA--GVEVRIARIFNTYGPRMCLDDG-------- 267
Query: 234 PRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGN 291
RV++ F LR+QP+ + G+ R+F Y+ D ++ ++ ++E + HI FN+GN
Sbjct: 268 -RVVSNFVAQTLRKQPMTVYGDGKQTRSFQYVSDLVDGLITLME-----SEHIGPFNLGN 321
Query: 292 PHNEVTVRQLAEMMTEVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQ 350
P E T+ +LA+++ E T+D S++ EF DD R PD++
Sbjct: 322 P-GEFTMLELAQVVKE--------------TIDPSARVEFKPNTADDPHMRKPDISKAKS 366
Query: 351 QLGWNPKTSLWDLLESTLT-YQHRTYAE 377
L W PK SL L ++ +Q R E
Sbjct: 367 LLHWEPKISLKQGLPRMVSDFQKRIMDE 394
>gi|418399420|ref|ZP_12972969.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti CCNWSX0020]
gi|359506513|gb|EHK79026.1| dTDP-glucose 4,6-dehydratase [Sinorhizobium meliloti CCNWSX0020]
Length = 348
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 49/363 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHLCE +LL H+++ LD ++ + + P + R+ I H
Sbjct: 31 ILVTGGAGFLGSHLCE-LLLGAGHEVICLDNFSTGLMCNIAPLKRFDTFRV------IAH 83
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E + D NLA +P Y P+ T + I +L ++ + R+ ST
Sbjct: 84 DV-VEPIDLEVDEIYNLACPASPPHYQADPIQTTKTCVIGSLNLLDLAARRGARIFQAST 142
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
E+YG P P Q +Y+ + +P FG R Y K+ E L +
Sbjct: 143 SEIYGD------PHVHP--QVESYW---GNVNP--FGP----RSCYDEGKRCAETLFFDF 185
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ +E IVR FN GPRM P +G RV++ F L+ + + + G
Sbjct: 186 HKFHEVEIKIVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDITIYGDGSQT 236
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F ++ D I+ + ++ +P G + N+GNP E T+ +LAE + + S
Sbjct: 237 RSFCFVDDLIDGFVRLMASPPSLTGPV-NLGNP-AEFTIGELAEEVIRLTGSRSKIVRRP 294
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 379
P DD +R PD+++ ++LGW PK +L + L T+ Y + ++
Sbjct: 295 LPV-------------DDPRQRRPDISLATEELGWRPKVNLAEGLAHTIRYFDDHLSRSM 341
Query: 380 KQA 382
+++
Sbjct: 342 RES 344
>gi|48093465|gb|AAT40109.1| putative UDP-glucuronate decarboxylase 3 [Nicotiana tabacum]
Length = 446
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 158/352 (44%), Gaps = 65/352 (18%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL ++++ I+ + + + ++++ G R +
Sbjct: 124 KGLRILVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMH---HFGNPRFEL--- 177
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E L+ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 178 -IRHDV-VEPLLVEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVGARFL 235
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KE +G++ R Y K+ E
Sbjct: 236 LTSTSEVYG---------------DPLQHPQKE----TYWGNVNPIGVRSCYDEGKRTAE 276
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F LR++PL
Sbjct: 277 TLTMDYHRGA--GVEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLT 325
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F ++ D +E ++ ++E H+ FN+GNP E T+ +LA ++ E
Sbjct: 326 VYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELAGVVQE-- 377
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
T+D +++ EF DD KR PD++ + LGW PK L
Sbjct: 378 ------------TIDPNAQIEFRPNTADDPHKRKPDISKAKELLGWEPKVPL 417
>gi|374596113|ref|ZP_09669117.1| NAD-dependent epimerase/dehydratase [Gillisia limnaea DSM 15749]
gi|373870752|gb|EHQ02750.1| NAD-dependent epimerase/dehydratase [Gillisia limnaea DSM 15749]
Length = 329
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 166/382 (43%), Gaps = 77/382 (20%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD--VYND--KIKHLLEPESQTGADRIQFHRL 75
I + GA GF+GSHLC++ + E +++ +D + D I HLL+ E+ +F+
Sbjct: 5 ILITGAAGFLGSHLCDRFIKEG-FEVIGMDNLITGDMKNIDHLLKEET------FEFYHY 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ +R + D ++ A+ +P DY P+ T+ + L ++ E R++
Sbjct: 58 DV---TRFVHVAGDLDYILHFASPASPIDYLKIPIQTLKVGSLGILHLLGLAKEKKARIL 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P P +D YY P R Y AK+ E +
Sbjct: 115 IASTSEVYGD------PLVHPQNED--YYGNVNSIGP---------RGVYDEAKRFQESM 157
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
A +G+E I R FN GPRM G RV+ F LR + L +
Sbjct: 158 TMAYHRFHGVETRIARIFNTYGPRMRLNDG---------RVIPAFIGQALRGEDLTVFGE 208
Query: 256 GQSQRTFIYIKDAIEAVLLMI----ENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK 311
G R+F Y+ D +E + ++ +P N+GNP +E+T++Q AE + ++
Sbjct: 209 GSQTRSFCYVDDQVEGIYRLLLSDYSDPV-------NIGNP-DEITIKQFAEEIIKLTN- 259
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY- 370
S + + EP + DD KR PD+T LGW PK S + +E T Y
Sbjct: 260 -STQKIVYEPLPE-----------DDPLKRQPDITRAKNILGWEPKVSRSEGMELTYNYF 307
Query: 371 -----------QHRTYAEAIKQ 381
+H+ +A I++
Sbjct: 308 KGLTKEELFKSEHKDFARHIRR 329
>gi|242090279|ref|XP_002440972.1| hypothetical protein SORBIDRAFT_09g018070 [Sorghum bicolor]
gi|241946257|gb|EES19402.1| hypothetical protein SORBIDRAFT_09g018070 [Sorghum bicolor]
Length = 445
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 161/359 (44%), Gaps = 71/359 (19%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVY-----NDKIKHLLEPESQTGADRI 70
K + + + G GF+GSHL ++ LLE ++ +D + ++ + HL +P +
Sbjct: 122 KALRVLVTGGAGFVGSHLVDR-LLERGDSVIVVDNFFTGRKDNVLHHLNDPNFEM----- 175
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
I+HD +E ++ D +LA +P Y P+ TI +N + L ++
Sbjct: 176 ------IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPIKTIKTNVVGTLNMLGLAKRI 228
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
N + + ST EVYG PL Q P + +P R Y K+
Sbjct: 229 NAKFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKR 271
Query: 191 LIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
E L Y GA LE I R FN GPRM G RV++ F LR++
Sbjct: 272 TAETLTMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKE 320
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMT 306
PL + G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++
Sbjct: 321 PLTVYGDGKQTRSFQYVSDLVEGLMKLME-----GDHVGPFNLGNP-GEFTMLELAKVVQ 374
Query: 307 EVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
+ T+D +++ EF DD KR PD++ + LGW PK L + L
Sbjct: 375 D--------------TIDPNAQIEFRQNTQDDPHKRKPDISRAKELLGWEPKIPLREGL 419
>gi|315497290|ref|YP_004086094.1| nad-dependent epimerase/dehydratase [Asticcacaulis excentricus CB
48]
gi|315415302|gb|ADU11943.1| NAD-dependent epimerase/dehydratase [Asticcacaulis excentricus CB
48]
Length = 328
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 154/354 (43%), Gaps = 55/354 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK---IKHLLEPESQTGADRIQFHRLN 76
I + G GF+GSHLCE+++ + +++ + I HL T R +F
Sbjct: 4 ILVAGGAGFLGSHLCERLIARGDEVLCVDNIHTGQKRNIHHL------TDLKRFEF---- 53
Query: 77 IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIH 136
I+HD +++ D NLA +P Y P+ T ++ I A+ ++ +++
Sbjct: 54 IRHDVTFPLYLEV-DEIYNLACPASPIHYQMDPVQTTKTSVIGAINLLGLAKRTRAKILQ 112
Query: 137 FSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLI 196
ST EVYG P+ P Q +Y+ A P R Y K+ E L
Sbjct: 113 ASTSEVYGD------PEVHP--QAESYFGRVNPAGP---------RACYDEGKRCAETLF 155
Query: 197 YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGG 256
+ ++G++ ++R FN GPRM P++G RV++ F LR +PL L G
Sbjct: 156 FDYQRQHGVDVRVMRIFNTYGPRMH-------PNDG--RVVSNFIVQALRGEPLTLYGTG 206
Query: 257 QSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
+ R+F ++ D I A++ ++ + N GNP E ++R+LA+ + + S
Sbjct: 207 EQTRSFCFVDDLISAMISFMDIKGTVTEPV-NFGNPQ-EFSMRELAQEVKRLTGSDSQVV 264
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
L P DD +R PD+ GW P T L LE T+ +
Sbjct: 265 MLPAPV-------------DDPGRRRPDIKRATALTGWEPTTPLSQGLEKTIRF 305
>gi|423299773|ref|ZP_17277798.1| hypothetical protein HMPREF1057_00939 [Bacteroides finegoldii
CL09T03C10]
gi|408473582|gb|EKJ92104.1| hypothetical protein HMPREF1057_00939 [Bacteroides finegoldii
CL09T03C10]
Length = 313
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 154/355 (43%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC + L+ H+++ LD + D I HL+ G + R
Sbjct: 4 ILVSGGAGFIGSHLCTR-LINDGHEVICLDNFFTGSKDNIAHLM------GNHHFEVVRH 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + E D NLA +P Y P+ T ++ + A+ ++ + +++
Sbjct: 57 DVTYPYSAE-----VDEIYNLACPASPLHYQHDPIQTAKTSVMGAINMLGLAMRLDAKVL 111
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG I + P YY + +P + R Y K+ E L
Sbjct: 112 QASTSEVYGDPI---------VHPQPEYYW--GNVNPVGY------RSCYDEGKRCAETL 154
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+N + I+R FN GPRM P++G RV++ F L + + +
Sbjct: 155 FMDYHRQNDVRVKIIRIFNTYGPRM-------LPNDG--RVVSNFVLQALNNEDITIYGD 205
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F YI D IE ++ M+E G + N+GNP NE ++++LAE + + S
Sbjct: 206 GTQTRSFQYIDDLIEGMIRMMETEDDFTGPV-NLGNP-NEFSIQELAEKIIAMTGSSSKI 263
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ ++LGW P L D L + Y
Sbjct: 264 VFKSLPN-------------DDPKQRQPDITLARKKLGWEPTIELEDGLSRMIEY 305
>gi|86747388|ref|YP_483884.1| sugar nucleotide dehydratase [Rhodopseudomonas palustris HaA2]
gi|86570416|gb|ABD04973.1| sugar nucleotide dehydratase [Rhodopseudomonas palustris HaA2]
Length = 317
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 159/363 (43%), Gaps = 61/363 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC+K+L E H++L +D Y I+HL+ G R +
Sbjct: 9 ILVSGGAGFIGSHLCDKLLAEG-HEVLCVDNYFTGWRRNIEHLV------GTPRFEV--- 58
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D+ NLA +P Y P+ T+ ++ A+ ++ ++
Sbjct: 59 -MRHDVTFPLYVEVDDI-YNLACPASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIF 116
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG D + P Y +G + R Y K+ E
Sbjct: 117 QASTSEVYG---------DPTVHPQPESY----------WGHVNPLGIRACYDEGKRAAE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ + + R FN GPRM P++G RV++ F L + +
Sbjct: 158 TLFFDYHRQHKVRIKVARIFNTYGPRMH-------PNDG--RVVSNFIVQALSGNDITIY 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D ++ ++ + G + N+GNP E ++RQLAE++ E+ S
Sbjct: 209 GDGSQTRSFCYVTDLLDGFGRLMASGDEFIGPV-NLGNP-VEFSIRQLAELVIEMTDSTS 266
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
A P DD +R PD+ + LGW PK +L D L+ T++Y +
Sbjct: 267 KIVARPLPA-------------DDPRQRQPDIALARSALGWEPKVALADGLKETISYFRK 313
Query: 374 TYA 376
A
Sbjct: 314 LLA 316
>gi|384178461|ref|YP_005564223.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324324545|gb|ADY19805.1| UDP-glucose 4-epimerase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 321
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 44/352 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y + K+ E + I+ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVKRGYDVTIVDNFYKGRNKYHDELMKE-----IRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKAKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGENILVYGDGEQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE++ ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-DNEKSIKEVAEVIKKLTKSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
V V +E Y G+++ R PD+ + + + + + + + L+ T+ +
Sbjct: 265 --KIVQVPFEEVYPHGFEEIPNRRPDVAKLRELVQFQAEVTWEEGLKETIKW 314
>gi|224140115|ref|XP_002323432.1| predicted protein [Populus trichocarpa]
gi|222868062|gb|EEF05193.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 162/356 (45%), Gaps = 65/356 (18%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL +K++ I+ + + + ++L+ G R +
Sbjct: 118 KSLRIVVTGGAGFVGSHLVDKLISRGDEVIVIDNFFTGRKENLVH---LFGNPRFEL--- 171
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 172 -IRHDV-VEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGARFL 229
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DP + KE +G++ +R Y K+ E
Sbjct: 230 LTSTSEVYG---------------DPLEHPQKE----TYWGNVNPIGERSCYDEGKRTAE 270
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA+ +E I R FN GPRM G RV++ F ++R+QP+
Sbjct: 271 TLAMDYHRGAD--VEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQVIRKQPMT 319
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D ++ ++ ++E H+ FN+GNP E T+ +LAE++ E
Sbjct: 320 VYGDGKQTRSFQYVSDLVDGLVALMEGE-----HVGPFNLGNP-GEFTMLELAEVVKE-- 371
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
T+D S+ EF DD KR PD++ + L W P+ SL + L
Sbjct: 372 ------------TIDSSATIEFKPNTADDPHKRKPDISKAKELLNWEPRISLREGL 415
>gi|182677026|ref|YP_001831172.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182632909|gb|ACB93683.1| NAD-dependent epimerase/dehydratase [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 326
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 163/366 (44%), Gaps = 51/366 (13%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFHRLNIK 78
I + G GGF+GSHLC + LL H++L +D + + +++ + G DR + ++
Sbjct: 8 ILVTGGGGFLGSHLCRR-LLGQGHEVLCVDNFFTGRRRNIAD---LMGHDRFEM----LR 59
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
HD +++ D NLA +P Y P+ T ++ + A+ ++ ++ S
Sbjct: 60 HDVTFPLFVEV-DAIYNLACPASPIHYQFDPVQTTKTSVVGAINMLGLAKRLKIPILQSS 118
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P + P Q Y+ +P GS R Y K+ E L +
Sbjct: 119 TSEVYGD------PTEHP--QTETYW---GHVNPV--GS----RSCYDEGKRCAETLFFD 161
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
++ L + R FN GP M P +G RV++ F L Q + + G
Sbjct: 162 YHRQHKLSIKVARIFNTYGPSMR-------PDDG--RVVSNFICQALLGQDITVYGKGTQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R+F Y+ D I+ + ++ +P G I N+GNP NE T+R+LAE + + S +
Sbjct: 213 TRSFCYVSDLIDGLDRLMNSPPEVTGPI-NIGNP-NEFTIRELAEKVIAMTGAKS--RII 268
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEA 378
E+P DD +R PD+T+ LGW P L + L T+ Y E
Sbjct: 269 EKPLPS-----------DDPRQRQPDITLAKNVLGWRPTVELEEGLTHTIAYFDSLLTEE 317
Query: 379 IKQAVA 384
K +V+
Sbjct: 318 GKSSVS 323
>gi|170742786|ref|YP_001771441.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46]
gi|168197060|gb|ACA19007.1| NAD-dependent epimerase/dehydratase [Methylobacterium sp. 4-46]
Length = 324
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 155/356 (43%), Gaps = 59/356 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLL-EPESQTGADRIQFHR 74
I + G GF+GSHLCE++L + H++L LD + ++HLL EP +
Sbjct: 9 ILVTGGAGFLGSHLCERLLAQG-HEVLCLDNFFTGTRANVRHLLDEPNFEL--------- 58
Query: 75 LNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRL 134
++HD +++ D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 59 --MRHDVTFPLYVEV-DEIYNLACPASPVHYQFDPVQTTKTSVHGAINMLGLAKRVKAKV 115
Query: 135 IHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIER 194
+ ST EVYG D + P Y + +P F R Y K+ E
Sbjct: 116 LQASTSEVYG---------DPEVHPQPEEYWGR--VNPIGF------RSCYDEGKRCAET 158
Query: 195 LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVD 254
L + ++ L +VR FN GPRM P++G RV++ LR + + L
Sbjct: 159 LFFDYHRQHNLPIKVVRIFNTYGPRMH-------PNDG--RVVSNLIVQALRGEDITLYG 209
Query: 255 GGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSG 314
G R+F Y+ D IEA+L M+ G I N+GNP E T+R+LAE++ EV S
Sbjct: 210 DGLQTRSFCYVDDLIEAMLRMMATGPEVTGPI-NIGNP-GEFTIRELAEIVLEVTGSRSR 267
Query: 315 EAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+ + L W P+ L + T+ Y
Sbjct: 268 LVHRPLPP-------------DDPKQRRPDIAKARRILNWEPQVDLRAGIARTVAY 310
>gi|423565221|ref|ZP_17541497.1| hypothetical protein II5_04625 [Bacillus cereus MSX-A1]
gi|401194438|gb|EJR01418.1| hypothetical protein II5_04625 [Bacillus cereus MSX-A1]
Length = 321
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 44/354 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + ++ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVRRGYEVTIVDNFYKGKNKYHNELMRE-----MRVILISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKGKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE + ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAETIKKLTKSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
+ V +E Y G+++ R P++T + + + + + L+ T+ + H
Sbjct: 265 --KIIQVPFEEVYPHGFEEIPNRRPNVTKLRELVQFQATVTWEQGLKETIKWFH 316
>gi|356539032|ref|XP_003538004.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 1
[Glycine max]
gi|356539034|ref|XP_003538005.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like isoform 2
[Glycine max]
Length = 342
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 156/347 (44%), Gaps = 54/347 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL +K++ ++++ D Y K L+ G R + I+H
Sbjct: 31 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK--RWIGHPRFEL----IRH 84
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D + LI++ D +LA +P Y P+ TI +N I L ++ R++ ST
Sbjct: 85 DVTEQLLIEV-DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTST 143
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIERLIY 197
EVYG D + P Y +G++ R Y K++ E L++
Sbjct: 144 SEVYG---------DPLVHPQPESY----------WGNVNPIGVRSCYDEGKRVAETLMF 184
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
++G+E I R FN GPRM+ G RV++ F +R +PL + G
Sbjct: 185 DYHRQHGIEIRIARIFNTYGPRMNIDDG---------RVVSNFIAQAIRGEPLTVQVPGT 235
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++E N N+GNP E T+ +LAE + E
Sbjct: 236 QTRSFCYVSDMVDGLIRLMEG---ENTGPINIGNP-GEFTMIELAENVKE---------- 281
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
L P V ++ E DD +R PD+T + L W PK L+D L
Sbjct: 282 LINPKVQINMVE---NTPDDPRQRKPDITKAKELLRWEPKVKLYDGL 325
>gi|91975042|ref|YP_567701.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisB5]
gi|91681498|gb|ABE37800.1| NAD-dependent epimerase/dehydratase [Rhodopseudomonas palustris
BisB5]
Length = 315
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 162/365 (44%), Gaps = 65/365 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC+++L E H++L +D Y I+HL+ G R +
Sbjct: 7 ILVSGGAGFIGSHLCDRLLAEG-HEVLCVDNYFTGWRRNIEHLV------GTPRFEV--- 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++HD +++ D+ NLA +P Y P+ T+ ++ A+ ++ ++
Sbjct: 57 -MRHDVTFPLYVEVDDI-YNLACPASPVHYQHDPVQTLKTSVHGAINMLGLAKRTRAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG D + P Y +G + R Y K+ E
Sbjct: 115 QASTSEVYG---------DPTVHPQPESY----------WGHVNPLGIRACYDEGKRAAE 155
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ ++ + R FN GPRM P +G RV++ F L + +
Sbjct: 156 TLFFDYHRQHKVKIKVARIFNTYGPRMH-------PRDG--RVVSNFIVQALSGDDITIY 206
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAK 311
G R+F Y+ D ++ ++ A +G I N+GNP E ++R+LAEM+ +
Sbjct: 207 GDGSQTRSFCYVTDLLDGFARLM---ATGDGFIGPVNLGNP-VEFSMRELAEMVIAMTDS 262
Query: 312 VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
S L P+ DD +R PD+T+ ++LGW PK +L D L+ T+ Y
Sbjct: 263 KSKLVYLPLPS-------------DDPKQRQPDITLARRELGWEPKVALADGLKETIGYF 309
Query: 372 HRTYA 376
+ A
Sbjct: 310 RKLLA 314
>gi|326430866|gb|EGD76436.1| UDP-glucuronate decarboxylase 1 [Salpingoeca sp. ATCC 50818]
Length = 449
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 157/356 (44%), Gaps = 54/356 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL + L++ H++ +D + K +E I+ + +
Sbjct: 115 ILITGGAGFVGSHLTDA-LMKQGHEVTVMDNFFTGRKKNVE-------HWIRHPNFELIN 166
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+E + D +LA+ +P Y P+ TI +N + + ++ RL+ ST
Sbjct: 167 HDVVEPFMIEVDEIYHLASPASPPHYMYNPIKTIKTNTLGTINMLGLAKRVGARLLLAST 226
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSI--EKQRWSYACAKQLIERLIY 197
EVYG P P P Y FG++ + R Y K++ E + Y
Sbjct: 227 SEVYGN------PTVHP---QPETY----------FGNVNPDGPRACYDEGKRIAETMCY 267
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A ++G+E + R FN GPRM G RV++ F L+ QP+ + G+
Sbjct: 268 AYQKQSGVEVRVARIFNTFGPRMHIGDG---------RVVSNFIIQALQGQPMTVYGEGK 318
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+F Y+ D ++ ++ ++ + N+GNP E T+ A+ + E+
Sbjct: 319 QTRSFQYVSDLVDGLMALMNSDF---SDPVNIGNPE-EYTMVDFAKSIRELVG------- 367
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
+P V+++ K DD +R PD+T Q LGW PK + D L+ T+ Y R
Sbjct: 368 --DPKVEITHKP---ATQDDPQRRRPDITRAKQHLGWEPKVKVVDGLKKTIEYFRR 418
>gi|440715697|ref|ZP_20896229.1| dTDP-glucose 4-6-dehydratase [Rhodopirellula baltica SWK14]
gi|436439369|gb|ELP32829.1| dTDP-glucose 4-6-dehydratase [Rhodopirellula baltica SWK14]
Length = 322
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 152/357 (42%), Gaps = 62/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE+ L+ H ++ LD + + HLL D+ F
Sbjct: 5 ILVTGGAGFLGSHLCER-LVSDGHDVICLDNFFTSQKSNVVHLL--------DKPHFEL- 54
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD L +++ D N+A P Y P+ TI ++ + ++ ++ R++
Sbjct: 55 -IRHDITLPIHLEV-DQIYNMACPAAPGHYQFNPIKTIKTSVMGSINMLGIAKRCGARIL 112
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG Q P + +P R Y K++ E L
Sbjct: 113 QASTSEVYGDP-----------EQHPQTESYRGSVNPIGI------RACYDEGKRVAETL 155
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
N ++ IVR FN GPRM P +G RV+A F L + +
Sbjct: 156 FMDYHRSNNVDVRIVRIFNTYGPRMH-------PFDG--RVVANFIRQALAGDDITIFGD 206
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y D +E ++ M+ +G I N+GNPH E T+RQLAE E+ S
Sbjct: 207 GSQTRSFCYRDDLVEVIIRMMN----CDGFIGPVNIGNPH-EFTIRQLAEKTIELTG--S 259
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+E P DD +R PD+ + ++L W PK L L+ T+ +
Sbjct: 260 SSKLIEAPL-----------PADDPTRRRPDIALAKEKLDWEPKIELEQGLKHTIDW 305
>gi|417305015|ref|ZP_12092007.1| dTDP-glucose 4-6-dehydratase [Rhodopirellula baltica WH47]
gi|327538659|gb|EGF25311.1| dTDP-glucose 4-6-dehydratase [Rhodopirellula baltica WH47]
Length = 361
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 153/357 (42%), Gaps = 62/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GSHLCE+ L+ H ++ LD + + HLL D+ F
Sbjct: 44 ILVTGGAGFLGSHLCER-LVSDGHDVICLDNFFTSQKTNVVHLL--------DKPNFEL- 93
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD L +++ D N+A P Y P+ TI ++ + ++ ++ R++
Sbjct: 94 -IRHDITLPIHLEV-DQIYNMACPAAPGHYQFNPIKTIKTSVMGSINMLGIAKRCGARIL 151
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG Q P + +P R Y K++ E L
Sbjct: 152 QASTSEVYGDP-----------EQHPQTESYRGSVNPIGI------RACYDEGKRVAETL 194
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
N ++ IVR FN GPRM P +G RV+A F L + +
Sbjct: 195 FMDYHRSNNVDVRIVRIFNTYGPRMH-------PFDG--RVVANFIRQALAGDDITIFGD 245
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y D +E ++ M+ +G I N+GNPH E T+RQLAE E+ S
Sbjct: 246 GSQTRSFCYRDDLVEVIIRMMN----CDGFIGPVNIGNPH-EFTIRQLAEKTIELTG--S 298
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+E P DD +R PD+++ ++L W PK L L+ T+ +
Sbjct: 299 SSKLIEAPL-----------PADDPTRRRPDISLAKEKLDWEPKIELEQGLKHTIDW 344
>gi|395774302|ref|ZP_10454817.1| NAD-dependent epimerase/dehydratase [Streptomyces acidiscabies
84-104]
Length = 310
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 149/354 (42%), Gaps = 55/354 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHL E+ LET H+++ +D + + + A + H + +
Sbjct: 4 ILITGGAGFIGSHLVER-YLETGHRVVCIDNFLTGSRENIGAHENNPALEVIEHDVTVPF 62
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
DS + + I+LA+ +P DY P++T+ + + L + N R + ST
Sbjct: 63 DSP-----EAVSVVIHLASPASPIDYLRFPVETLGAGSLGTLNALNLAMSMNARFVLAST 117
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIERLIY 197
EVYG DPA + E +G++ R Y AK+ E L
Sbjct: 118 SEVYG---------------DPAVHPQPE----SYWGNVNPIGPRSVYDEAKRFGEALTM 158
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A IVR FN GPRM G R + F L ++PL + G
Sbjct: 159 AFRRHRDTNAGIVRIFNCFGPRMRLFDG---------RAVPTFIRQALGKEPLTVAGDGS 209
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGH-IFNVGNPHNEVTVRQLAEMMTEVYAKVSGEA 316
R+ Y+ D +E + A+++G N+GNP EV++ LA+ + +
Sbjct: 210 QTRSLCYVDDIVEGIFQF----AKSDGSGPLNLGNPE-EVSMLDLAKEVIHL-------- 256
Query: 317 ALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
T S EF G DD ++R+PD+T L W P+ + D L T+ +
Sbjct: 257 -----TGSPSHVEFIGRPQDDPERRLPDITAAKGALAWEPRVTRADGLARTIDW 305
>gi|261402193|ref|YP_003246417.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus vulcanius
M7]
gi|261369186|gb|ACX71935.1| NAD-dependent epimerase/dehydratase [Methanocaldococcus vulcanius
M7]
Length = 334
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 165/364 (45%), Gaps = 57/364 (15%)
Query: 19 TICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIK 78
TI + G GFIG++L ++ LLE +K++ +D N+ L + +F + +I
Sbjct: 11 TILVTGGAGFIGTNLIKR-LLEDNNKVICID--NNYTGRLENIKQFLDNPNFKFIKHDIT 67
Query: 79 HDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFS 138
++EG + D NLA +P Y P+ T+ ++ + +++ ++N +++H S
Sbjct: 68 KPIKIEGEL---DEIYNLACPASPPHYQKNPIFTLNTSIFGIINILELAKKHNAKILHAS 124
Query: 139 TCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYA 198
T EVYG P + P Q +Y+ P R Y K++ E Y
Sbjct: 125 TSEVYGN------PLEHP--QKESYWGNVNPIGP---------RACYDEGKRVAETYCYE 167
Query: 199 EGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQS 258
GL+ IVR FN GP MD P++G RV++ F L+ +PL + G+
Sbjct: 168 YWKNFGLDVRIVRIFNTYGPYMD-------PNDG--RVVSNFIIQALKNEPLTVYGDGKQ 218
Query: 259 QRTFIYIKDAIEAVLLM-------IENPARANGH-----IFNVGNPHNEVTVRQLAEMMT 306
R+F YI D IE +L +EN ++ + + N+GNP E T+ +LA +
Sbjct: 219 TRSFQYIDDLIEGMLKYMEMDKEGLENKLKSKFNWDTIPVLNMGNPE-EFTILELANKVL 277
Query: 307 EVYAKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
E+ + E F DD +R PD+T+ + L W PK L + L+
Sbjct: 278 ELIPESKSEIV------------FKPLPKDDPVRRRPDITMAKEVLSWKPKIRLEEGLKK 325
Query: 367 TLTY 370
T+ Y
Sbjct: 326 TIEY 329
>gi|255691769|ref|ZP_05415444.1| NAD-dependent epimerase/dehydratase family protein [Bacteroides
finegoldii DSM 17565]
gi|260622485|gb|EEX45356.1| NAD dependent epimerase/dehydratase family protein [Bacteroides
finegoldii DSM 17565]
Length = 313
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 155/355 (43%), Gaps = 57/355 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLC + L+ H+++ LD + D I HL+ G + R
Sbjct: 4 ILVSGGAGFIGSHLCTR-LINNGHEVICLDNFFTGSKDNIAHLM------GNHHFEVVRH 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ + E D NLA +P Y P+ T ++ + A+ ++ + +++
Sbjct: 57 DVTYPYSAE-----VDEIYNLACPASPIHYQHDPIQTAKTSVMGAINMLGLAMRLDAKVL 111
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG I + P YY + +P + R Y K+ E L
Sbjct: 112 QASTSEVYGDPI---------VHPQPEYYW--GNVNPVGY------RSCYDEGKRCAETL 154
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+N + I+R FN GPRM P++G RV++ F L + + +
Sbjct: 155 FMDYHRQNDVRVKIIRIFNTYGPRM-------LPNDG--RVVSNFVLQALNNEDITIYGD 205
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G+ R+F YI D IE ++ M+E G + N+GNP NE ++++LA+ + + S
Sbjct: 206 GKQTRSFQYIDDLIEGMIRMMETEDDFTGPV-NLGNP-NEFSIQELAKKIIAMTGSSSKI 263
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ ++LGW P L D L + Y
Sbjct: 264 VFKSLPN-------------DDPKQRQPDITLARKKLGWEPTIELEDGLSRMIEY 305
>gi|394988212|ref|ZP_10381050.1| NAD-dependent epimerase/dehydratase familyprotein [Sulfuricella
denitrificans skB26]
gi|393792670|dbj|GAB70689.1| NAD-dependent epimerase/dehydratase familyprotein [Sulfuricella
denitrificans skB26]
Length = 322
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 158/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GFIGSHLCE+ LL H IL +D + D I HLL D F L
Sbjct: 11 ILVTGGAGFIGSHLCER-LLSDGHDILCVDNFYTGTRDNITHLL--------DHPHFELL 61
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD +++ D NLA +P Y P+ T ++ ++ ++ + +++
Sbjct: 62 --RHDITFPLFVEV-DEIYNLACPASPIHYQNDPVQTTKTSVHGSINMLGLAKRVHAKIL 118
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DPA + +E +G + R Y K+ E
Sbjct: 119 LASTSEVYG---------------DPAMHPQQES----YWGHVNPIGPRACYDEGKRCAE 159
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++GL + R FN GPRM P +G RV++ F LR P+ +
Sbjct: 160 TLFFDYHRQHGLHIKVARIFNTYGPRMH-------PDDG--RVVSNFIVQTLRGLPITIY 210
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
GQ R+F YI D IEA++ ++ G + N+GNP E T+ +LA+ + + +
Sbjct: 211 GDGQQTRSFCYIDDMIEALVRLMNTSDDFTGPV-NLGNP-VEFTIYELAQHILRLVGSTA 268
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+P + + DD +R PD+T+ + + W P +L L+ T+ Y
Sbjct: 269 ------DPIFHLLPE-------DDPRQRCPDITLAKKIMEWQPGIALDTGLKQTIDY 312
>gi|50659030|gb|AAT80328.1| UDP-D-glucuronate decarboxylase [Hordeum vulgare]
Length = 385
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 165/372 (44%), Gaps = 62/372 (16%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + + + G GF+GSHL +++L I+ + + + +++ G +
Sbjct: 64 KGLRVVVTGGAGFVGSHLVDRLLARGDSVIVVDNFFTGRKENVAH---HAGNPNFEM--- 117
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 118 -IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 175
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG PL Q P + +P R Y K+ E L
Sbjct: 176 LTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKRTAETL 218
Query: 196 I--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
Y GA LE I R FN GPRM G RV++ F LR++PL +
Sbjct: 219 TMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLTVY 267
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAK 311
G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++ +
Sbjct: 268 GDGKQTRSFQYVSDLVEGLMKLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQD---- 317
Query: 312 VSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT- 369
T+D +++ EF DD KR PD+T + LGW PK +L + L +
Sbjct: 318 ----------TIDPNARIEFRANTADDPHKRKPDITKAKELLGWEPKVALRNGLPLMVQD 367
Query: 370 YQHRTYAEAIKQ 381
++ R + + +Q
Sbjct: 368 FRTRIFGDQKQQ 379
>gi|326494042|dbj|BAJ85483.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 157/354 (44%), Gaps = 61/354 (17%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + + + G GF+GSHL +++L I+ + + + +++ G +
Sbjct: 115 KGLRVVVTGGAGFVGSHLVDRLLARGDSVIVVDNFFTGRKENVAH---HAGNPNFEM--- 168
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 169 -IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 226
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG PL Q P + +P R Y K+ E L
Sbjct: 227 LTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKRTAETL 269
Query: 196 I--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
Y GA LE I R FN GPRM G RV++ F LR++PL +
Sbjct: 270 TMDYHRGAN--LEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEPLTVY 318
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVYAK 311
G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++ +
Sbjct: 319 GDGKQTRSFQYVSDLVEGLMKLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQD---- 368
Query: 312 VSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLL 364
T+D +++ EF DD KR PD+T + LGW PK +L + L
Sbjct: 369 ----------TIDPNARIEFRANTADDPHKRKPDITKAKELLGWEPKVALRNGL 412
>gi|149199217|ref|ZP_01876255.1| putative dTDP-glucose 4,6-dehydratase protein [Lentisphaera
araneosa HTCC2155]
gi|149137642|gb|EDM26057.1| putative dTDP-glucose 4,6-dehydratase protein [Lentisphaera
araneosa HTCC2155]
Length = 323
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 162/361 (44%), Gaps = 59/361 (16%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALDV----YNDKIKHLLEPESQTGADRI 70
+K TI + G GF+GSHLC++++ E H ++ LD Y + HLL S
Sbjct: 6 MKAKTILVTGGAGFLGSHLCDRLINEG-HNVICLDNLQTGYKQNVAHLLSHSS------F 58
Query: 71 QFHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN 130
+F R +I RLE D NLA +P Y P+ T + + ++ ++ N
Sbjct: 59 EFIRHDICETIRLE-----VDEIYNLACPASPPHYQNNPVGTTKTCVLGSINMLGLAKRN 113
Query: 131 NKRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQ 190
N +++ ST EVYG PK P ++ + D +P R Y K+
Sbjct: 114 NAKILQASTSEVYGD------PKVHPQVEE-----YRGDVNPIGI------RACYDEGKR 156
Query: 191 LIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPL 250
E L + ++G++ ++R FN GP+MD P +G RV++ F L+ + +
Sbjct: 157 CAETLFFDYHRQHGVKIKVMRIFNTYGPKMD-------PDDG--RVVSNFIVQALQGKDI 207
Query: 251 KLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYA 310
+ G R+F + D ++ + ++ + G I N+GNP +E T+++LAE +
Sbjct: 208 TIYGDGSQTRSFCFKDDLLDGMQALMNSDDAITGPI-NIGNP-DEFTIKELAEEVIR--- 262
Query: 311 KVSGEAALEEPTVDVSSKEFYGE-GYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLT 369
VD +S+ Y DD +R P++ + L W P L + L+ T+
Sbjct: 263 -----------QVDTTSQIIYKPLPADDPTRRKPNIEKAKEILNWQPSIKLSEGLKPTIA 311
Query: 370 Y 370
Y
Sbjct: 312 Y 312
>gi|444917388|ref|ZP_21237489.1| dTDP-glucose 4,6-dehydratase [Cystobacter fuscus DSM 2262]
gi|444711142|gb|ELW52095.1| dTDP-glucose 4,6-dehydratase [Cystobacter fuscus DSM 2262]
Length = 319
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 50/365 (13%)
Query: 15 IKPVTICMIGAGGFIGSHLCEKILLETPHKILALD-VYNDKIKHLLEPESQTGADRIQFH 73
+K + ++G GF+GSHLCE++L + +++++D +++ ++ G + +
Sbjct: 1 MKGQRVAVLGGAGFLGSHLCERLLEDGAARVVSVDNCLTGSERNVAHLRARAGFESL--- 57
Query: 74 RLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
R +I +EG + D NLA+ +P DY PL+T+ + +K
Sbjct: 58 RQDITEGLSVEGPL---DYVFNLASPASPIDYAKLPLETMRVGSVGTENGLKLAEVKGAV 114
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
+ ST E+YG P P R+D Y+ P R Y AK+ E
Sbjct: 115 FLQASTSEIYGD------PLVHPQRED--YWGNVNSIGP---------RACYDEAKRYSE 157
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L G++ IVR FN GPRM G RV+ F LR + +
Sbjct: 158 ALTMVYARSRGVKTRIVRIFNTYGPRMRLNDG---------RVVPAFVGQALRGEDFTVF 208
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+KD I+ ++ + + N+GNP E+T+R+ AE + +
Sbjct: 209 GDGTQTRSFCYVKDLIDGLVRLALSDVI---EPVNIGNPR-EMTMREFAEAVRKAAGGGG 264
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
L P DD +R PD+T + LGW P+ SL + L T+++ +
Sbjct: 265 KIVHLPLPK-------------DDPKQRQPDITRAREWLGWEPRVSLEEGLRETISWFRK 311
Query: 374 TYAEA 378
+
Sbjct: 312 VAGQG 316
>gi|433606819|ref|YP_007039188.1| putative dTDP-glucose 4,6-dehydratase [Saccharothrix espanaensis
DSM 44229]
gi|407884672|emb|CCH32315.1| putative dTDP-glucose 4,6-dehydratase [Saccharothrix espanaensis
DSM 44229]
Length = 308
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 151/354 (42%), Gaps = 56/354 (15%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
+ + G GF+GSH+CE +L + + + +L PE+ +L + H
Sbjct: 6 VVVTGGAGFVGSHVCEALLRSGVRVVCVDNFRTGSVDNL--PENP---------KLGVVH 54
Query: 80 D--SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137
+R L+ DL ++LA +P DY P+DT+ + + L ++ R++
Sbjct: 55 ADVTRPLDLLGEVDLVLHLACPASPVDYLRMPVDTLRTGALGTLHALELAHRKGARIVVA 114
Query: 138 STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIY 197
ST EVYG P + P R+D Y+ P R Y AK+ E +
Sbjct: 115 STSEVYGD------PLEHPQRED--YWGNVNPIGP---------RSVYDEAKRFGEAAVE 157
Query: 198 AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQ 257
A E G IVR FN GPRM P +G RV+ F + +PL + GQ
Sbjct: 158 AFRREYGTNTAIVRIFNTYGPRMR-------PDDG--RVIPTFLSQARAGRPLTVHGDGQ 208
Query: 258 SQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAA 317
R+ ++ D + +LLM E+ N+GNP EVTV ++AE + +
Sbjct: 209 QTRSLCHVDDLVRGLLLMAESDHHGP---INLGNP-QEVTVLEIAERIIAL--------- 255
Query: 318 LEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQ 371
T S E DD +R PD+++ LGW P+ SL + L + +
Sbjct: 256 ----TGSASRIEHVDAMVDDPRRRRPDISLARSVLGWQPEISLDEGLRRSFALE 305
>gi|410896590|ref|XP_003961782.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Takifugu
rubripes]
Length = 418
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 161/371 (43%), Gaps = 52/371 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GF+GSHL +K++++ H++ +D + K +E G + + I H
Sbjct: 89 ILITGGAGFVGSHLTDKLMMDG-HEVTVVDNFFTGRKRNVE--HWIGHENFEL----INH 141
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
D +E L D +LA+ +P +Y P+ T+ +N I L ++ RL+ ST
Sbjct: 142 DV-VEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLAST 200
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P++ P Q+ Y+ P R Y K++ E + YA
Sbjct: 201 SEVYGD------PEEHP--QNEEYWGHVNPIGP---------RACYDEGKRVAETMCYAY 243
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ G+E + R FN G RM G RV++ F L+ +PL + G
Sbjct: 244 MKQEGVEVRVARIFNTFGSRMHMNDG---------RVVSNFILQALQGEPLTVYGTGSQT 294
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R F Y+ D + ++L++ + + N+GNP E T+ + A ++ +
Sbjct: 295 RAFQYVSDLVNGLVLLMNSNISSP---VNLGNPE-EHTILEFARLIKSL----------- 339
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYA-EA 378
V S +F E DD +R PD+ LGW P L + L T+ Y R +A
Sbjct: 340 --VVSRSQIQFLPEAQDDPQRRRPDIRKAKMMLGWEPVVPLEEGLNKTIHYFSRELEHQA 397
Query: 379 IKQAVAKPVAS 389
Q + KP A+
Sbjct: 398 NNQYIPKPKAA 408
>gi|215678617|dbj|BAG92272.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 419
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 163/373 (43%), Gaps = 74/373 (19%)
Query: 17 PVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQF 72
P+ + + G GF+GSHL +++L I+ + + + +HL +P +
Sbjct: 107 PLRVVVTGGAGFVGSHLVDELLARGDSVIVVDNFFTGRKENVARHLADPRFEL------- 159
Query: 73 HRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNK 132
I+HD +E ++ D +LA +P Y P+ TI +N + L ++
Sbjct: 160 ----IRHDV-VEPILLEVDQIYHLACPASPVHYKFNPIKTIKTNVMGTLNMLGLAKRVGA 214
Query: 133 RLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQ 190
R + ST EVYG DP + KE +G + R Y K+
Sbjct: 215 RFLLTSTSEVYG---------------DPLEHPQKE----SYWGHVNPIGVRSCYDEGKR 255
Query: 191 LIERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQ 248
E L Y GA G+E I R FN GPRM G RV++ F LR+Q
Sbjct: 256 TAETLTMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQTLRKQ 304
Query: 249 PLKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMT 306
P+ + G+ R+F Y+ D ++ ++ ++E + HI FN+GNP E T+ +LA+++
Sbjct: 305 PMTVYGDGKQTRSFQYVSDLVDGLITLME-----SEHIGPFNLGNP-GEFTMLELAQVVK 358
Query: 307 EVYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLE 365
E T+D S++ EF DD R PD++ L W PK SL L
Sbjct: 359 E--------------TIDPSARVEFKPNTADDPHMRKPDISKAKSLLHWEPKISLKQGLP 404
Query: 366 STLT-YQHRTYAE 377
++ +Q R E
Sbjct: 405 RMVSDFQKRIMDE 417
>gi|345868203|ref|ZP_08820197.1| rmlD substrate binding domain protein [Bizionia argentinensis
JUB59]
gi|344047417|gb|EGV43047.1| rmlD substrate binding domain protein [Bizionia argentinensis
JUB59]
Length = 328
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 162/376 (43%), Gaps = 61/376 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + GA GF+GSHL ++ + E + +D Y + IKHLL+ + +F
Sbjct: 4 VLITGAAGFLGSHLSDRFIKEG-FFVFGMDNYITGDSKNIKHLLDEPN------FKFIEH 56
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
++ +EG + D ++ A+ +P DY P+ T+ + ++ N R++
Sbjct: 57 DVTEFIEIEGDL---DYILHFASPASPIDYLKIPIQTLKVGSLGTHNLLGLAKAKNARIL 113
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST EVYG DP + ED +G++ R Y AK+ E
Sbjct: 114 IASTSEVYG---------------DPLVHPQTED----YYGNVNTIGPRGVYDEAKRFQE 154
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
+ A +GLE IVR FN GPRM G RV+ F LR + L +
Sbjct: 155 SITMAYHRFHGLETRIVRIFNTYGPRMRLNDG---------RVIPAFMGQALRGEDLTVF 205
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D +E + ++ + + N+GNPH E+T++ AE + ++
Sbjct: 206 GDGMQTRSFCYVDDQVEGIYNLLFSDY---SYPVNIGNPH-EITIKDFAEEIIKLTGTDQ 261
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
E PT DD +R PD+T+ + L W PK + +E+T Y +
Sbjct: 262 KIIYKELPT-------------DDPLQRQPDITLAKKLLNWTPKVDRAEGMETTFNYFKQ 308
Query: 374 TYAEAIKQAVAKPVAS 389
E + ++ K +S
Sbjct: 309 LSPEELNKSEHKDFSS 324
>gi|407772817|ref|ZP_11120119.1| NAD-dependent epimerase/dehydratase [Thalassospira profundimaris
WP0211]
gi|407284770|gb|EKF10286.1| NAD-dependent epimerase/dehydratase [Thalassospira profundimaris
WP0211]
Length = 318
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 155/356 (43%), Gaps = 58/356 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
+ + G GF+GSHLCE+ LLE + +L +D + D I HLL D+ F +
Sbjct: 7 VLVTGGAGFLGSHLCER-LLEEGNDVLCVDNFFTGTKDNIVHLL--------DKPHFELM 57
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD L D NLA +P Y P+ T ++ A+ ++ ++
Sbjct: 58 --RHDVTFP-LYLEVDEIYNLACPASPIHYQHDPVQTTKTSVHGAINMLGLAKRVGAKIF 114
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST EVYG P+ P +D + + +P R Y K+ E L
Sbjct: 115 QASTSEVYGD------PEVHPQTED-----YRGNVNPI------GPRACYDEGKRCAETL 157
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ ++GL+ + R FN GPRM P +G RV++ F L + + +
Sbjct: 158 FFDYHRQHGLDIKVARIFNTYGPRMH-------PQDG--RVVSNFIIQALHGEDITIYGD 208
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
GQ R+F + D IE + ++ G + N+GNP+ E+T+R+LAE + E+ S
Sbjct: 209 GQQTRSFCFYTDLIEGFVRLMATDKTVTGPM-NLGNPY-EITIRELAERVIEMTGAKSKL 266
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQL-GWNPKTSLWDLLESTLTY 370
+ P DD +R PD+T L GW P SL D L ST+ Y
Sbjct: 267 IFKDLPA-------------DDPLQRKPDITFARNTLDGWEPTVSLEDGLGSTIEY 309
>gi|374330332|ref|YP_005080516.1| nucleoside-diphosphate sugar epimerase [Pseudovibrio sp. FO-BEG1]
gi|359343120|gb|AEV36494.1| nucleoside-diphosphate sugar epimerase [Pseudovibrio sp. FO-BEG1]
Length = 336
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 164/372 (44%), Gaps = 66/372 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVY----NDKIKHLLEPESQTGADRIQFHRL 75
I + G GF+GS+L EK LLE H++L LD + ++HLL D +F L
Sbjct: 15 ILVTGGSGFLGSYLSEK-LLEAGHEVLCLDNFFTGTRMNVEHLL--------DHKRFELL 65
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
+HD + L D NLA +P Y P+ T ++ + A+ ++ +++
Sbjct: 66 --RHDV-CQPLFVEVDEIYNLACPASPVHYQFDPVQTTKTSVLGAINMLGLAKRVKAKIL 122
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST E+YG D + P Y +G++ R Y K+ E
Sbjct: 123 QASTSEIYG---------DPQVHPQPEEY----------WGNVNPIGVRSCYDEGKRCAE 163
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L Y +N + ++R FN GPRM P++G RV++ F L +P+ L
Sbjct: 164 TLFYDYYRQNNINIRVMRIFNTYGPRMH-------PNDG--RVVSNFIMQALMNKPITLY 214
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y D ++ ++ ++ P + I N+GNP E T++QLAE++ E+ S
Sbjct: 215 GDGMQTRSFCYRDDLVDGMIKLMNAPDHISMPI-NIGNP-KEFTIKQLAELVLELTG--S 270
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
+ EP DD +R PD+T LGW P T L + L T+ Y +
Sbjct: 271 KSRIIREPLPQ-----------DDPLQRKPDITRARDYLGWRPTTELREGLGKTIHYFEQ 319
Query: 374 TY-----AEAIK 380
AEA+K
Sbjct: 320 LLSKHGEAEAVK 331
>gi|75760243|ref|ZP_00740297.1| NAD dependent epimerase/dehydratase family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218895563|ref|YP_002443974.1| NAD-dependent epimerase/dehydratase [Bacillus cereus G9842]
gi|402562466|ref|YP_006605190.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-771]
gi|423363064|ref|ZP_17340563.1| hypothetical protein IC1_05040 [Bacillus cereus VD022]
gi|434373556|ref|YP_006608200.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-789]
gi|74492269|gb|EAO55431.1| NAD dependent epimerase/dehydratase family [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218543179|gb|ACK95573.1| NAD-dependent epimerase/dehydratase family protein [Bacillus cereus
G9842]
gi|401076498|gb|EJP84852.1| hypothetical protein IC1_05040 [Bacillus cereus VD022]
gi|401791118|gb|AFQ17157.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-771]
gi|401872113|gb|AFQ24280.1| NAD-dependent epimerase/dehydratase [Bacillus thuringiensis HD-789]
Length = 321
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 44/354 (12%)
Query: 21 CMI-GAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
C+I G GFIGSHL E+++ + + Y K K+ E + ++ +++
Sbjct: 5 CLITGGAGFIGSHLAEELVRRGYEVTIVDNFYKGKNKYHNELMRE-----MRVIPISVLD 59
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+ + L+ D+ +LAAI + ++ I +NF +++ + K+++ ST
Sbjct: 60 KNSIYELVNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKKVVFAST 119
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYGK F + L +G+ K RWSYA K L E L
Sbjct: 120 SEVYGKGKPPFSEEGDRL-----------------YGATSKIRWSYAVCKTLEETLCLGY 162
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGV-PRVLACFSNNLLRRQPLKLVDGGQS 258
E GL TIVR FN GPR DGP GV PR F + L+ + + + G+
Sbjct: 163 ALE-GLPVTIVRYFNIYGPRAK-----DGPYAGVIPR----FISAALQGEDILVYGDGKQ 212
Query: 259 QRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAAL 318
R F Y+ DA+EA + ++ + NG I N+G+ NE +++++AE + ++ S
Sbjct: 213 TRCFTYVSDAVEATIRAMDE--KVNGEIINIGS-ENEKSIKEVAETIKKLTKSSS----- 264
Query: 319 EEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQH 372
+ V +E Y G+++ R P++T + + + + + L+ T+ + H
Sbjct: 265 --KIIQVPFEEVYPHGFEEIPNRRPNVTKLRELVQFQATVTWEQGLKETIKWFH 316
>gi|337269677|ref|YP_004613732.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum
WSM2075]
gi|336029987|gb|AEH89638.1| NAD-dependent epimerase/dehydratase [Mesorhizobium opportunistum
WSM2075]
Length = 345
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 154/357 (43%), Gaps = 63/357 (17%)
Query: 22 MIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKH-----LLEPESQTGADRIQFHRLN 76
+ G GF+GSHLCE+ LL+ ++++ALD ++ KH L +P+
Sbjct: 27 VAGGAGFLGSHLCER-LLQDGYEVVALDNFHTGKKHNLNALLRDPKFTC----------- 74
Query: 77 IKHD-SRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD L D NLA +P Y P+ T ++ + +L +++ NN ++
Sbjct: 75 IEHDIVNALPLDLRVDEIYNLACPASPPHYQADPIHTFKTSVLGSLNLLELARRNNAKIF 134
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQ--RWSYACAKQLIE 193
ST EVYG D + P Y FG++ R Y K+ E
Sbjct: 135 QASTSEVYG---------DPLVHPQPEGY----------FGNVNTHGPRSCYDEGKRSAE 175
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + GL+ + R FN G RM P +G RV++ F LR + L +
Sbjct: 176 TLFFDYSRTYGLDVRVARIFNTYGRRMQ-------PDDG--RVVSNFIVQALRGEDLTVY 226
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y D IE + ++ P RA H N+GNP E T+ +LA T V A +
Sbjct: 227 GSGLQTRSFCYADDLIEGFVRLMNAP-RAPAHPVNLGNP-GEFTIMELA---TLVVAYTN 281
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
+ + + + DD +R PD++ LGW P+ SL L T+ Y
Sbjct: 282 SSSKIVHRPLPI----------DDPRQRRPDISFARDNLGWQPRISLSQGLAHTVEY 328
>gi|224131118|ref|XP_002321005.1| predicted protein [Populus trichocarpa]
gi|118484863|gb|ABK94298.1| unknown [Populus trichocarpa]
gi|222861778|gb|EEE99320.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 167/385 (43%), Gaps = 70/385 (18%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDK----IKHLLEPESQTGADRIQ 71
K + I + G GF+GSHL ++++ I+ + + + + H P +
Sbjct: 118 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFKNPRFEL------ 171
Query: 72 FHRLNIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN 131
I+HD +E L+ D +LA +P Y P+ TI +N + L ++
Sbjct: 172 -----IRHDV-VEPLLLEVDQIYHLACPASPVHYKHNPVKTIKTNVVGTLNMLGLAKRVG 225
Query: 132 KRLIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQL 191
R + ST EVYG PL Q P + +P R Y K+
Sbjct: 226 ARFLLTSTSEVYG----------DPL-QHPQVETYWGNVNPI------GVRSCYDEGKRT 268
Query: 192 IERLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQP 249
E L Y GA G+E I R FN GPRM G RV++ F LR++P
Sbjct: 269 AETLAMDYHRGA--GVEVRIARIFNTYGPRMCIDDG---------RVVSNFVAQALRKEP 317
Query: 250 LKLVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTE 307
+ + G+ R+F ++ D +E ++ ++E H+ FN+GNP E T+ +LA+++ E
Sbjct: 318 MTVYGDGKQTRSFQFVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELAQVVQE 371
Query: 308 VYAKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLES 366
T+D +++ EF DD KR PD+T LGW PK L L
Sbjct: 372 --------------TIDPNARIEFRPNTEDDPHKRKPDITKAKDLLGWEPKIPLRKGLPM 417
Query: 367 TLT-YQHRTYAEAIKQAVAKPVASS 390
++ ++ R + + ++ A ++S
Sbjct: 418 MVSDFRQRIFGDHREEGTATNTSTS 442
>gi|227820018|ref|YP_002823989.1| dTDP-glucose 4-6-dehydratase [Sinorhizobium fredii NGR234]
gi|227339017|gb|ACP23236.1| dTDP-glucose 4-6-dehydratase [Sinorhizobium fredii NGR234]
Length = 346
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 162/355 (45%), Gaps = 49/355 (13%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
P + + G GF+GSHLC +LL+ H+++ D ++ ++ +EP + FH
Sbjct: 26 SPKRVLVTGGAGFLGSHLC-ALLLKAGHQVICADNFSTGLRRNVEPLMRYDG----FHL- 79
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I HD +E L D NLA +P Y P+ T + + +L +++ + + R++
Sbjct: 80 -IAHDI-VEPLDVEVDEIYNLACPASPPHYQADPIQTTKTCVLGSLNMLELAARYDARIL 137
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERL 195
ST E+YG P+ P Q +Y+ + +P FG R Y K+ E L
Sbjct: 138 QASTSEIYGD------PQVHP--QVESYW---GNVNP--FGP----RSCYDEGKRCAESL 180
Query: 196 IYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDG 255
+ +E +VR FN GPRM P +G RV++ F L+ + + +
Sbjct: 181 FFDFHKTRQVEIKVVRIFNTYGPRMR-------PDDG--RVVSNFIVQALKGEDITVYGD 231
Query: 256 GQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGE 315
G R+F ++ D I+ + ++ +PA I N+GNP E T+ +LAE + E+ S
Sbjct: 232 GSQTRSFCFVDDLIDGFVRLMASPASLTAPI-NLGNP-GEFTIVELAEQVIELTGSRSKI 289
Query: 316 AALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+++ ++LGW P+ L L T+ +
Sbjct: 290 VQRPLPV-------------DDPRQRRPDISLAERELGWRPRVELTAGLMHTIDH 331
>gi|189424205|ref|YP_001951382.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
gi|189420464|gb|ACD94862.1| NAD-dependent epimerase/dehydratase [Geobacter lovleyi SZ]
Length = 312
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 61/357 (17%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYN---DKIKHLLEPESQTGADRIQFHRLN 76
I + G GF+GSHLCE++L E I +++ D I HL++ HR
Sbjct: 3 ILVTGGAGFLGSHLCERLLNEGNDVICLDNLFTGSKDNIIHLMDN-----------HRFE 51
Query: 77 -IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E ++ D NLA +P Y P+ T+ ++ + + ++ R++
Sbjct: 52 LIRHDI-VEPILLEVDRIYNLACPASPVHYQYNPVKTVKTSVMGMINMLGMAKRVKARIL 110
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIE--KQRWSYACAKQLIE 193
ST EVYG DP + KE+ +G++ R Y K++ E
Sbjct: 111 QASTSEVYG---------------DPQVHPQKEE----YWGNVNPIGIRSCYDEGKRVAE 151
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L+ +N ++ I+R FN GPRM +E RV++ F L+ + + +
Sbjct: 152 TLMMDYHRQNKVDIRIIRIFNTYGPRM---------AENDGRVVSNFMLQALKNEDITVF 202
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G+ R+F Y+ D I+ ++ M+EN G + N+GNP E T+ + AE + + S
Sbjct: 203 GEGRQTRSFCYVSDLIDGMIRMMENEQDFIGPV-NLGNPV-ENTILEFAEKIITITGSKS 260
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ ++LGW P L L++T Y
Sbjct: 261 KIIYKPLPQ-------------DDPKQRRPDITLAQEKLGWQPSIDLETGLKATADY 304
>gi|389783163|ref|ZP_10194657.1| NAD-dependent epimerase/dehydratase [Rhodanobacter spathiphylli
B39]
gi|388435101|gb|EIL92019.1| NAD-dependent epimerase/dehydratase [Rhodanobacter spathiphylli
B39]
Length = 316
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 160/365 (43%), Gaps = 61/365 (16%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLN--- 76
I + G GF+GSHLC++ LL H +L +D + TG+ R H L
Sbjct: 4 ILVTGGAGFLGSHLCDR-LLRDGHDVLCVDNFF------------TGSKRNVAHLLTHPY 50
Query: 77 ---IKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKR 133
++HD +++ + NLA +P Y P+ T ++ A+ ++ R
Sbjct: 51 FELMRHDVTFPLYVEVERI-FNLACPASPVHYQHDPVQTTKTSVHGAINMLGLAKRVKAR 109
Query: 134 LIHFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIE 193
++ ST EVYG P+ P Q Y+ +P R Y K+ E
Sbjct: 110 ILQASTSEVYGD------PEVHP--QVEGYW---GKVNPIGI------RSCYDEGKRCAE 152
Query: 194 RLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLV 253
L + ++ L+ +VR FN GPRM P +G RV++ F LR + + +
Sbjct: 153 TLFFDYHRQHDLDIKVVRIFNTYGPRMH-------PDDG--RVVSNFIMQALRGEDITIY 203
Query: 254 DGGQSQRTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVS 313
G R+F Y+ D IE ++ M+++ G + N+GNP E T+ +LAE +V A V
Sbjct: 204 GDGSQTRSFCYVDDLIEVIVRMMDSGRGFTGPV-NIGNP-VEYTMLELAE---KVIALVG 258
Query: 314 GEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHR 373
G + L + DD +R PD+++ +LGW P +L D L T+ Y R
Sbjct: 259 GRSKLVNKPLPS----------DDPRQRQPDISVARDKLGWQPSVTLEDGLRETIAYFRR 308
Query: 374 TYAEA 378
E
Sbjct: 309 LREEG 313
>gi|359729062|ref|ZP_09267758.1| nucleoside-diphosphate-sugar epimerase [Leptospira weilii str.
2006001855]
gi|417780350|ref|ZP_12428114.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira weilii str. 2006001853]
gi|410779589|gb|EKR64203.1| 3-beta hydroxysteroid dehydrogenase/isomerase family protein
[Leptospira weilii str. 2006001853]
Length = 312
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 160/351 (45%), Gaps = 50/351 (14%)
Query: 20 ICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRLNIKH 79
I + G GFIGSHLCE++L E I +++ + K++ + + +F R +I
Sbjct: 6 ILITGGAGFIGSHLCERLLKEGNEIICLDNLHTGRKKNI---QKLLNDPKFEFIRHDITD 62
Query: 80 DSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFST 139
+LE D N+A +P Y + + TI +N + + ++ R++ ST
Sbjct: 63 PIKLE-----VDQIYNMACPASPVHYQSNAIKTIKTNVLGMMNMLGLAKRVKARILQAST 117
Query: 140 CEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEKQRWSYACAKQLIERLIYAE 199
EVYG P + P Q Y+ + +P R Y K++ E L +
Sbjct: 118 SEVYGN------PLEHP--QKETYW---GNVNPIGI------RSCYDEGKRVAETLCFDY 160
Query: 200 GAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQ 259
+ ++ ++R FN GPRM P +G RV++ F L+++ + L G+
Sbjct: 161 QRNHKVDIRVIRIFNTYGPRM-------LPDDG--RVVSNFIVQALKKEDITLYGEGEQT 211
Query: 260 RTFIYIKDAIEAVLLMIENPARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALE 319
R+F Y+ D ++ ++ M+ N NG + N+GN E TVR+LAE++ + S
Sbjct: 212 RSFCYVDDLVDGIIRMM-NTEGFNGPV-NLGN-DGEFTVRELAELVLKETGSASKIVHKP 268
Query: 320 EPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 370
P DD +R PD+T+ Q+LG+ PK L + + T+ Y
Sbjct: 269 LPQ-------------DDPARRKPDLTLAKQRLGFEPKVPLVEGIRKTIEY 306
>gi|356503900|ref|XP_003520738.1| PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Glycine max]
Length = 411
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 157/352 (44%), Gaps = 65/352 (18%)
Query: 16 KPVTICMIGAGGFIGSHLCEKILLETPHKILALDVYNDKIKHLLEPESQTGADRIQFHRL 75
K + I + G GF+GSHL ++++ I+ + + ++++ G +
Sbjct: 92 KGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGMKENVMH---HFGNPNFEL--- 145
Query: 76 NIKHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLI 135
I+HD +E L+ D +LA +P Y P+ TI +N + L ++ R +
Sbjct: 146 -IRHDV-VEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARFL 203
Query: 136 HFSTCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDASPCIFGSIEK--QRWSYACAKQLIE 193
ST E+YG DP + KE +G++ R Y K+ E
Sbjct: 204 LTSTSEIYG---------------DPLEHPQKE----TYWGNVNPIGVRSCYDEGKRTAE 244
Query: 194 RLI--YAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLK 251
L Y GA G+E I R FN GPRM G RV++ F LR++PL
Sbjct: 245 TLTMDYHRGA--GVEVRIARIFNTYGPRMCLDDG---------RVVSNFVAQALRKEPLT 293
Query: 252 LVDGGQSQRTFIYIKDAIEAVLLMIENPARANGHI--FNVGNPHNEVTVRQLAEMMTEVY 309
+ G+ R+F Y+ D +E ++ ++E H+ FN+GNP E T+ +LA+++ E
Sbjct: 294 VYGDGKQTRSFQYVSDLVEGLMRLMEGE-----HVGPFNLGNP-GEFTMLELAKVVQE-- 345
Query: 310 AKVSGEAALEEPTVDVSSK-EFYGEGYDDSDKRIPDMTIINQQLGWNPKTSL 360
T+D +K E+ DD KR PD++ +QLGW PK L
Sbjct: 346 ------------TIDPEAKIEYRPNTEDDPHKRKPDISRAKEQLGWEPKVDL 385
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,308,135,516
Number of Sequences: 23463169
Number of extensions: 271262277
Number of successful extensions: 611913
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 14224
Number of HSP's that attempted gapping in prelim test: 591650
Number of HSP's gapped (non-prelim): 17164
length of query: 390
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 246
effective length of database: 8,980,499,031
effective search space: 2209202761626
effective search space used: 2209202761626
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)