Query 016373
Match_columns 390
No_of_seqs 86 out of 88
Neff 3.2
Searched_HMMs 46136
Date Fri Mar 29 06:16:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016373.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016373hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05703 Auxin_canalis: Auxin 100.0 1.3E-76 2.7E-81 557.7 13.7 199 38-244 1-242 (242)
2 PF08458 PH_2: Plant pleckstri 100.0 3.3E-53 7.1E-58 360.1 12.6 107 267-373 1-108 (110)
3 PF12814 Mcp5_PH: Meiotic cell 97.4 0.0028 6.1E-08 54.4 11.1 104 263-369 9-122 (123)
4 smart00233 PH Pleckstrin homol 97.0 0.0067 1.4E-07 44.6 8.9 98 265-368 3-101 (102)
5 PF00169 PH: PH domain; Inter 96.2 0.038 8.2E-07 41.8 8.1 94 265-368 3-103 (104)
6 cd01250 PH_centaurin Centaurin 95.3 0.2 4.4E-06 38.6 9.3 91 265-366 1-93 (94)
7 cd01220 PH_CDEP Chondrocyte-de 95.3 0.16 3.4E-06 42.6 9.2 94 263-368 2-97 (99)
8 cd00821 PH Pleckstrin homology 95.1 0.18 3.8E-06 36.7 7.9 33 334-366 62-95 (96)
9 cd01219 PH_FGD FGD (faciogenit 94.1 0.56 1.2E-05 38.8 9.4 97 263-369 2-100 (101)
10 cd01235 PH_SETbf Set binding f 93.8 0.73 1.6E-05 36.6 9.2 35 333-367 66-100 (101)
11 cd00900 PH-like Pleckstrin hom 90.8 4 8.8E-05 29.8 9.4 33 334-366 63-98 (99)
12 cd01249 PH_oligophrenin Oligop 90.6 2.2 4.8E-05 37.0 8.9 92 265-365 1-102 (104)
13 cd01251 PH_centaurin_alpha Cen 89.5 3.3 7.1E-05 34.4 8.8 34 336-369 68-101 (103)
14 cd01265 PH_PARIS-1 PARIS-1 ple 87.8 5 0.00011 32.8 8.7 32 335-366 61-92 (95)
15 cd01261 PH_SOS Son of Sevenles 87.3 5.7 0.00012 34.5 9.2 97 263-369 4-110 (112)
16 cd01254 PH_PLD Phospholipase D 85.9 1.1 2.4E-05 38.4 4.0 35 333-367 87-121 (121)
17 cd01233 Unc104 Unc-104 pleckst 82.6 12 0.00025 30.8 8.6 33 335-367 65-97 (100)
18 cd01246 PH_oxysterol_bp Oxyste 80.2 18 0.0004 27.5 8.5 87 267-366 3-90 (91)
19 cd01260 PH_CNK Connector enhan 79.2 20 0.00043 28.6 8.7 34 333-366 61-95 (96)
20 cd01257 PH_IRS Insulin recepto 78.7 4.1 8.9E-05 34.5 4.8 34 334-367 68-101 (101)
21 cd01218 PH_phafin2 Phafin2 Pl 77.0 26 0.00055 30.0 9.1 35 335-369 65-99 (104)
22 cd01230 PH_EFA6 EFA6 Pleckstri 75.9 19 0.00041 31.4 8.2 92 271-367 17-110 (117)
23 cd01238 PH_Tec Tec pleckstrin 75.6 30 0.00065 28.9 9.1 33 334-366 73-105 (106)
24 PF15410 PH_9: Pleckstrin homo 74.9 12 0.00027 31.8 6.7 91 271-366 17-116 (119)
25 cd01264 PH_melted Melted pleck 74.9 6.3 0.00014 33.7 5.0 32 335-366 68-99 (101)
26 cd01247 PH_GPBP Goodpasture an 72.6 6.2 0.00013 32.3 4.2 32 335-366 58-90 (91)
27 cd01252 PH_cytohesin Cytohesin 72.3 50 0.0011 27.9 9.8 30 345-374 90-119 (125)
28 cd01248 PH_PLC Phospholipase C 71.8 29 0.00064 29.0 8.2 97 262-367 5-115 (115)
29 cd01222 PH_clg Clg (common-sit 71.5 41 0.00089 28.5 9.0 35 334-368 58-95 (97)
30 cd01227 PH_Dbs Dbs (DBL's big 67.7 59 0.0013 29.3 9.6 38 333-370 78-117 (133)
31 PF15413 PH_11: Pleckstrin hom 62.5 13 0.00028 31.5 4.3 34 333-366 78-111 (112)
32 cd01245 PH_RasGAP_CG5898 RAS G 61.6 68 0.0015 27.2 8.4 90 266-366 2-97 (98)
33 cd01244 PH_RasGAP_CG9209 RAS_G 60.0 84 0.0018 26.5 8.7 32 335-366 66-97 (98)
34 cd01224 PH_Collybistin Collybi 56.9 1.2E+02 0.0025 26.8 9.2 96 265-365 4-104 (109)
35 cd01232 PH_TRIO Trio pleckstri 55.7 1.1E+02 0.0025 26.6 9.0 37 333-369 72-113 (114)
36 cd01266 PH_Gab Gab (Grb2-assoc 55.7 1.2E+02 0.0026 25.1 9.0 32 336-367 76-107 (108)
37 cd01236 PH_outspread Outspread 55.4 28 0.0006 29.8 5.1 32 334-365 70-101 (104)
38 PLN02958 diacylglycerol kinase 52.5 42 0.00092 35.4 6.9 80 271-369 25-106 (481)
39 PTZ00283 serine/threonine prot 50.9 77 0.0017 32.8 8.4 97 265-369 375-490 (496)
40 PTZ00267 NIMA-related protein 50.2 52 0.0011 33.5 7.0 95 264-368 378-476 (478)
41 cd01253 PH_beta_spectrin Beta- 48.0 1.4E+02 0.0031 24.0 8.0 33 334-366 70-103 (104)
42 cd01234 PH_CADPS CADPS (Ca2+-d 44.3 31 0.00068 30.8 3.8 51 315-366 57-108 (117)
43 PF15409 PH_8: Pleckstrin homo 38.5 56 0.0012 27.6 4.3 34 333-366 54-87 (89)
44 cd01223 PH_Vav Vav pleckstrin 38.1 2.6E+02 0.0057 24.9 8.6 91 275-368 17-111 (116)
45 cd01221 PH_ephexin Ephexin Ple 34.4 1.7E+02 0.0037 26.3 6.9 99 263-365 3-119 (125)
46 cd01226 PH_exo84 Exocyst compl 29.5 3.8E+02 0.0082 23.3 8.3 86 265-366 4-96 (100)
47 cd01243 PH_MRCK MRCK (myotonic 24.9 1.4E+02 0.003 27.1 4.7 37 333-369 77-120 (122)
48 PF15405 PH_5: Pleckstrin homo 24.9 4.7E+02 0.01 23.2 8.0 88 270-366 7-133 (135)
49 KOG4424 Predicted Rho/Rac guan 24.0 1.4E+02 0.0031 33.3 5.4 95 262-368 271-369 (623)
50 cd01237 Unc112 Unc-112 pleckst 23.5 1.1E+02 0.0023 26.9 3.7 31 335-365 66-100 (106)
51 PF14593 PH_3: PH domain; PDB: 23.3 1.6E+02 0.0035 25.4 4.7 37 334-371 66-102 (104)
52 PF04842 DUF639: Plant protein 21.2 61 0.0013 36.4 2.1 58 290-357 205-265 (683)
53 PF12306 PixA: Inclusion body 21.1 6.6E+02 0.014 23.1 8.5 43 264-307 53-97 (172)
54 cd01241 PH_Akt Akt pleckstrin 20.1 5E+02 0.011 21.4 8.8 34 334-367 64-101 (102)
No 1
>PF05703 Auxin_canalis: Auxin canalisation; InterPro: IPR008546 This domain consists of several plant proteins of unknown function.
Probab=100.00 E-value=1.3e-76 Score=557.69 Aligned_cols=199 Identities=55% Similarity=0.788 Sum_probs=174.2
Q ss_pred CCCCCchhhhhhcccccchHHHHHHHhhhh-----------------------hhhhhh---cccCCCCccccccccccc
Q 016373 38 PQTPKEPMEFLSRSWSLSASEISKALAQKQ-----------------------KQLLLD---QNFNAMPETLHGSQISAS 91 (390)
Q Consensus 38 P~TP~EpMEFLsRSWSlSAsEiskaL~~~~-----------------------~~~~~~---~~~~~~~~~~~~~~~~g~ 91 (390)
||||+|||||||||||+||+||||+|.... .++.|. .+++++|+++... .+.
T Consensus 1 PETP~EPMEFLSRSWSvSAsEVSKAL~~~s~~~~ss~~~~~~~~~~~~~~~~~~~~s~~~~~t~~lv~~~~~~~~--~~~ 78 (242)
T PF05703_consen 1 PETPREPMEFLSRSWSVSASEVSKALSPPSNRSISSFIDPEDAESDNDKDRFGSSFSFASSATSQLVMDRIMSQS--SGA 78 (242)
T ss_pred CCCCcccHHHHHHhhhhhHHHHhhhcCCcccccccccccccchhccccccccCCCCCcccccCcccccccccccc--ccc
Confidence 899999999999999999999999999931 111121 2566676655422 233
Q ss_pred cccccccc------------CcccccchhcccccccchhhhhhHHHhhhhhhhhhHHhHHHHHHHHHHHHHhcCCC----
Q 016373 92 IVNSINAR------------RTGSIGKWFHHHRELSTSKVKKKDRARVENARMHSALSVAGLAAALAAVAAAAGKS---- 155 (390)
Q Consensus 92 ~~~~i~~~------------~~~tigrW~k~~~~~~~~~~kkkee~R~~~AqvHAAVSVA~vAAAvAavaA~~~~~---- 155 (390)
.+++|+++ ++++|||||||++ +|||||+|+||||||||||||+||||||+|+++++..
T Consensus 79 ~spp~sp~~~~~~~~~~~~~~~~~i~~w~~~~~------~kkkee~R~~~A~vhaAvSVA~vAaavAavaa~~~~~~~~~ 152 (242)
T PF05703_consen 79 DSPPISPRDLDDSKKIIRANGGKTIGRWLKDRK------EKKKEEARAHNAQVHAAVSVAGVAAAVAAVAAATAASSSSG 152 (242)
T ss_pred CCCCcchhhHHHHHHHHHhcccchHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCC
Confidence 33444433 4679999999977 5999999999999999999999999999999998874
Q ss_pred -CCCCchhhhhhhhHHHHHHHHHHHHHHhhCCCchhhhHHHhhhhcccCCCchhhHHHHHHhccchHHHHhhhcchhhhc
Q 016373 156 -DSSGSKMSMALSSATELLASHCIELAESAGADHDRVASVVRSAVDIQTPGDLMTLTAAAATALRGEAALKARLPKEARK 234 (390)
Q Consensus 156 -~~~~~k~~~avASAaaLvAa~CvE~AE~~GA~rd~vasaV~sav~~~s~gdimTLTAaAATaLRGAAtLKaR~~ke~~~ 234 (390)
+++++||++||||||+|||+||+|+||.|||+||||+++|+|||+++||||||||||+|||||||+||||+|++||+|+
T Consensus 153 ~~~~~~k~~~avASAa~LvAa~C~e~Ae~~GA~~~~v~s~v~sav~~~s~gdi~TLTAaAATaLRGaa~Lk~R~~ke~~~ 232 (242)
T PF05703_consen 153 KDESSSKMDAAVASAAALVAAQCAEAAEAAGADRDQVASAVRSAVNVRSPGDIMTLTAAAATALRGAATLKARAQKEARS 232 (242)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhcCCCchHHHHHHHHHHhcCchHHHHHHHHhhhhhc
Confidence 7789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccc
Q 016373 235 NASISPYERE 244 (390)
Q Consensus 235 ~Aav~P~ek~ 244 (390)
||+|+||||+
T Consensus 233 ~a~v~P~e~~ 242 (242)
T PF05703_consen 233 NAAVLPYEKG 242 (242)
T ss_pred ccccccCCCC
Confidence 9999999985
No 2
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=100.00 E-value=3.3e-53 Score=360.12 Aligned_cols=107 Identities=62% Similarity=0.973 Sum_probs=104.4
Q ss_pred cceeeeccCCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeeecCcccCCCCccccc-ceeeEEEEEcCCe
Q 016373 267 GELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWPYKKEREI-SEEVYFGLKTAQG 345 (390)
Q Consensus 267 geLLkrtrkG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp~r~e~~~-~~~~yFgLkTa~G 345 (390)
||||||||||+||||+||||||+++|||||||||||||||||||||||+|||+|+|+||||++.++ ++++||||+|++|
T Consensus 1 ~eLlk~tr~G~l~~k~Vsvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~~awpgr~~~e~~~~~~yfgL~T~~G 80 (110)
T PF08458_consen 1 GELLKRTRKGDLHWKTVSVYINKKGQVILKMKSKHVGGAFSKKKKSVVLDVCSEIPAWPGRELREDGEERRYFGLKTAQG 80 (110)
T ss_pred CcceEecCCCceEEEEEEEEECCCcEEEEEeecchhhhhhhcCCceEEEEEccCcccCCCcccccCCceEEEEEEEecCc
Confidence 799999999999999999999999999999999999999999999999999999999999998887 7999999999999
Q ss_pred eEEEEeCCchhHhhHHHHHHHHHHhhhh
Q 016373 346 LLEFKCKSKIHKQRWVDGIQNLLRQVSS 373 (390)
Q Consensus 346 ~vEfec~s~~~~q~W~~gI~~lL~~~~~ 373 (390)
+|||+|+||+|||+|++||++||+++++
T Consensus 81 ~vEfec~~~~~~k~W~~gI~~mL~~~~~ 108 (110)
T PF08458_consen 81 VVEFECDSQREYKRWVQGIQHMLSQVAE 108 (110)
T ss_pred EEEEEeCChhhHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999874
No 3
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.36 E-value=0.0028 Score=54.36 Aligned_cols=104 Identities=19% Similarity=0.180 Sum_probs=65.2
Q ss_pred CCCccceeeeccCC------eeeEEEEEEEEcCCcEEEEEeccccccccccccceeE----EEeeecCcccCCCCccccc
Q 016373 263 HPCEGELMQLTRKG------VLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCI----VYGVCDESAAWPYKKEREI 332 (390)
Q Consensus 263 la~ggeLLkrtrkG------~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~V----V~~V~~~~pawp~r~e~~~ 332 (390)
+-.|..|+|.+|+| .-|.|-+=|-++ ...++=.=++.-.......+.++| |..|.+.-|.=++.+. .
T Consensus 9 ~~~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~-~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~-~- 85 (123)
T PF12814_consen 9 LMIGEWLYKYTRKGRSGISEKPHRRYFWVDPY-TRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKK-P- 85 (123)
T ss_pred hhcccEEEEEcccccCccCCCcEEEEEEEeCC-CCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccc-c-
Confidence 45788888999999 777777655555 333332222222233333333333 3344443322111111 1
Q ss_pred ceeeEEEEEcCCeeEEEEeCCchhHhhHHHHHHHHHH
Q 016373 333 SEEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 333 ~~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~lL~ 369 (390)
+...-|.|.|..+.|.|.|.+..++++|.++++.|+.
T Consensus 86 ~~~~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~~ 122 (123)
T PF12814_consen 86 DHNKSIIIVTPDRSLDLTAPSRERHEIWFNALRYLLQ 122 (123)
T ss_pred ccceEEEEEcCCeEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 2556678999999999999999999999999999985
No 4
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=97.04 E-value=0.0067 Score=44.58 Aligned_cols=98 Identities=17% Similarity=0.225 Sum_probs=62.4
Q ss_pred CccceeeeccCCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeeecCcccCCCCcccccceeeEEEEEcCC
Q 016373 265 CEGELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWPYKKEREISEEVYFGLKTAQ 344 (390)
Q Consensus 265 ~ggeLLkrtrkG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp~r~e~~~~~~~yFgLkTa~ 344 (390)
+.|.|+++.+.+...|+.+-+.+.. .++.--+.++-..-+......-+.++.-.... +........+|-|.+.+
T Consensus 3 ~~G~l~~~~~~~~~~~~~~~~~L~~--~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~----~~~~~~~~~~f~l~~~~ 76 (102)
T smart00233 3 KEGWLYKKSGGKKKSWKKRYFVLFN--STLLYYKSEKAKKDYKPKGSIDLSGITVREAP----DPDSAKKPHCFEIKTAD 76 (102)
T ss_pred eeEEEEEeCCCccCCceEEEEEEEC--CEEEEEeCCCccccCCCceEEECCcCEEEeCC----CCccCCCceEEEEEecC
Confidence 6788998887667788888888874 33333455443211222222223332111111 01002357899999999
Q ss_pred e-eEEEEeCCchhHhhHHHHHHHHH
Q 016373 345 G-LLEFKCKSKIHKQRWVDGIQNLL 368 (390)
Q Consensus 345 G-~vEfec~s~~~~q~W~~gI~~lL 368 (390)
+ .+.|.|.+..+.+.|.+.|+..+
T Consensus 77 ~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 77 RRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred CceEEEEcCCHHHHHHHHHHHHHhh
Confidence 9 99999999999999999998764
No 5
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=96.20 E-value=0.038 Score=41.78 Aligned_cols=94 Identities=19% Similarity=0.245 Sum_probs=60.5
Q ss_pred CccceeeeccCCeeeEEEEEEEEcCCcEEEEEecccc------ccccccccceeEEEeeecCcccCCCCcccccceeeEE
Q 016373 265 CEGELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKH------VGGAFSKKNKCIVYGVCDESAAWPYKKEREISEEVYF 338 (390)
Q Consensus 265 ~ggeLLkrtrkG~l~wk~VSvyink~~qVilKmKskh------v~Gafskkkk~VV~~V~~~~pawp~r~e~~~~~~~yF 338 (390)
+.|.|++++ .+.-.|+..=+.+.. +++++ -++.. .-|.+.-..- .|....+. ......+...+|
T Consensus 3 ~~G~L~~~~-~~~~~wk~r~~vL~~-~~L~~-~~~~~~~~~~~~~~~i~l~~~-~v~~~~~~------~~~~~~~~~~~f 72 (104)
T PF00169_consen 3 KEGWLLKKS-SSRKKWKKRYFVLRD-SYLLY-YKSSKDKSDSKPKGSIPLDDC-TVRPDPSS------DFLSNKKRKNCF 72 (104)
T ss_dssp EEEEEEEEE-SSSSSEEEEEEEEET-TEEEE-ESSTTTTTESSESEEEEGTTE-EEEEETSS------TSTSTSSSSSEE
T ss_pred EEEEEEEEC-CCCCCeEEEEEEEEC-CEEEE-EecCccccceeeeEEEEecCc-eEEEcCcc------ccccccCCCcEE
Confidence 568899888 666788888888863 44333 23322 1122222211 22222111 001223678999
Q ss_pred EEEcCCe-eEEEEeCCchhHhhHHHHHHHHH
Q 016373 339 GLKTAQG-LLEFKCKSKIHKQRWVDGIQNLL 368 (390)
Q Consensus 339 gLkTa~G-~vEfec~s~~~~q~W~~gI~~lL 368 (390)
-|.|..+ .+.|.|+|..+++.|++.|+..+
T Consensus 73 ~i~~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 73 EITTPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9999998 99999999999999999999865
No 6
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.34 E-value=0.2 Score=38.62 Aligned_cols=91 Identities=15% Similarity=0.168 Sum_probs=58.2
Q ss_pred CccceeeeccCCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEe-eecCcccCCCCccccc-ceeeEEEEEc
Q 016373 265 CEGELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYG-VCDESAAWPYKKEREI-SEEVYFGLKT 342 (390)
Q Consensus 265 ~ggeLLkrtrkG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~-V~~~~pawp~r~e~~~-~~~~yFgLkT 342 (390)
+.|-|+|++++|.-.|+..=+.+. .+.+++--..... .......|-+. +..+. ..+. +....|-|.|
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~-~~~l~~y~~~~~~---~~~~~~~i~l~~~~v~~-------~~~~~~~~~~f~i~~ 69 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLK-NGQLTYHHRLKDY---DNAHVKEIDLRRCTVRH-------NGKQPDRRFCFEVIS 69 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEe-CCeEEEEcCCccc---ccccceEEeccceEEec-------CccccCCceEEEEEc
Confidence 468899998876667888877776 5666664433321 01111112221 11111 0111 3578999999
Q ss_pred CCeeEEEEeCCchhHhhHHHHHHH
Q 016373 343 AQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 343 a~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
....+.|..++..+.+.|+..|++
T Consensus 70 ~~~~~~f~a~s~~~~~~Wi~al~~ 93 (94)
T cd01250 70 PTKTWHFQADSEEERDDWISAIQE 93 (94)
T ss_pred CCcEEEEECCCHHHHHHHHHHHhc
Confidence 999999999999999999999864
No 7
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=95.34 E-value=0.16 Score=42.57 Aligned_cols=94 Identities=17% Similarity=0.331 Sum_probs=56.8
Q ss_pred CCCccceeeeccCCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeeecCcccCCCCccccc--ceeeEEEE
Q 016373 263 HPCEGELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWPYKKEREI--SEEVYFGL 340 (390)
Q Consensus 263 la~ggeLLkrtrkG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp~r~e~~~--~~~~yFgL 340 (390)
+.++|.|+|..|+| .+.|..-.| | + +|=.-+++. +.+.++.|.+..+=.--. -.+.++ .....|-|
T Consensus 2 ~ikEG~L~K~~~k~-~~~R~~FLF-n-D---~LlY~~~~~----~~~~~y~~~~~i~L~~~~--V~~~~~~~~~~~~F~I 69 (99)
T cd01220 2 FIRQGCLLKLSKKG-LQQRMFFLF-S-D---LLLYTSKSP----TDQNSFRILGHLPLRGML--TEESEHEWGVPHCFTI 69 (99)
T ss_pred eeeEEEEEEEeCCC-CceEEEEEc-c-c---eEEEEEeec----CCCceEEEEEEEEcCceE--EeeccCCcCCceeEEE
Confidence 34899999999998 444543333 3 2 222223332 234445554443200000 001111 23468999
Q ss_pred EcCCeeEEEEeCCchhHhhHHHHHHHHH
Q 016373 341 KTAQGLLEFKCKSKIHKQRWVDGIQNLL 368 (390)
Q Consensus 341 kTa~G~vEfec~s~~~~q~W~~gI~~lL 368 (390)
.+.+..+.|-+.+..+++.|.+.|+.-+
T Consensus 70 ~~~~ks~~l~A~s~~Ek~~Wi~~i~~aI 97 (99)
T cd01220 70 FGGQCAITVAASTRAEKEKWLADLSKAI 97 (99)
T ss_pred EcCCeEEEEECCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998754
No 8
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=95.10 E-value=0.18 Score=36.72 Aligned_cols=33 Identities=15% Similarity=0.470 Sum_probs=30.4
Q ss_pred eeeEEEEEcCC-eeEEEEeCCchhHhhHHHHHHH
Q 016373 334 EEVYFGLKTAQ-GLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 334 ~~~yFgLkTa~-G~vEfec~s~~~~q~W~~gI~~ 366 (390)
...+|-|.+.. ..+.|.|.|..+++.|.+.|+.
T Consensus 62 ~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 62 RKNCFEIRTPDGRSYLLQAESEEEREEWIEALQS 95 (96)
T ss_pred CCcEEEEecCCCcEEEEEeCCHHHHHHHHHHHhc
Confidence 57899999998 7999999999999999999874
No 9
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.09 E-value=0.56 Score=38.76 Aligned_cols=97 Identities=14% Similarity=0.270 Sum_probs=57.9
Q ss_pred CCCccceeeeccCCeeeEEEEEEEEcCCcEEEEEeccccc--cccccccceeEEEeeecCcccCCCCcccccceeeEEEE
Q 016373 263 HPCEGELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKHV--GGAFSKKNKCIVYGVCDESAAWPYKKEREISEEVYFGL 340 (390)
Q Consensus 263 la~ggeLLkrtrkG~l~wk~VSvyink~~qVilKmKskhv--~Gafskkkk~VV~~V~~~~pawp~r~e~~~~~~~yFgL 340 (390)
+-+.|.|+|..++.. .|+.-=+|+=.+--+.-| .++. +.-|..+..--|.++.-+.+ .+.+...-|-|
T Consensus 2 ~ikeG~L~K~~~~~~-~~k~RyffLFnd~Ll~~~--~~~~~~~~~y~~~~~i~l~~~~v~~~-------~~~~~~~~F~I 71 (101)
T cd01219 2 LLKEGSVLKISSTTE-KTEERYLFLFNDLLLYCV--PRKMIGGSKFKVRARIDVSGMQVCEG-------DNLERPHSFLV 71 (101)
T ss_pred cccceEEEEEecCCC-CceeEEEEEeCCEEEEEE--cccccCCCcEEEEEEEecccEEEEeC-------CCCCcCceEEE
Confidence 348899999887642 454445666323333333 3322 22233333222332221110 01133566999
Q ss_pred EcCCeeEEEEeCCchhHhhHHHHHHHHHH
Q 016373 341 KTAQGLLEFKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 341 kTa~G~vEfec~s~~~~q~W~~gI~~lL~ 369 (390)
.+.+..+.|-|++..+++.|.+.|+..+.
T Consensus 72 ~~~~rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 72 SGKQRCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred ecCCcEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999998653
No 10
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=93.75 E-value=0.73 Score=36.62 Aligned_cols=35 Identities=31% Similarity=0.511 Sum_probs=31.5
Q ss_pred ceeeEEEEEcCCeeEEEEeCCchhHhhHHHHHHHH
Q 016373 333 SEEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNL 367 (390)
Q Consensus 333 ~~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~l 367 (390)
....+|.+.|...+..|.+++..+.+.|++.|+.+
T Consensus 66 ~~~~~f~i~t~~r~~~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 66 SRKGFFDLKTSKRTYNFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred CCceEEEEEeCCceEEEECCCHHHHHHHHHHHHhh
Confidence 35678999999999999999999999999999864
No 11
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=90.78 E-value=4 Score=29.80 Aligned_cols=33 Identities=24% Similarity=0.535 Sum_probs=29.5
Q ss_pred eeeEEEEEcC---CeeEEEEeCCchhHhhHHHHHHH
Q 016373 334 EEVYFGLKTA---QGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 334 ~~~yFgLkTa---~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
....|.|.+. .+.+.|.|.+..+.+.|.+.|++
T Consensus 63 ~~~~F~i~~~~~~~~~~~~~~~~~~~~~~W~~al~~ 98 (99)
T cd00900 63 DPNCFAIVTKDRGRRVFVFQADSEEEAQEWVEALQQ 98 (99)
T ss_pred CCceEEEECCCCCcEEEEEEcCCHHHHHHHHHHHhc
Confidence 4678999999 68999999999999999998875
No 12
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=90.59 E-value=2.2 Score=37.03 Aligned_cols=92 Identities=14% Similarity=0.278 Sum_probs=57.8
Q ss_pred CccceeeeccCCeee--EEEEEEEEcCCcEE----EEEecc-ccccccccccceeEEEeeecCcccCCCCccccc-ceee
Q 016373 265 CEGELMQLTRKGVLR--CKFVSVYINKKSQV----IVKLKS-KHVGGAFSKKNKCIVYGVCDESAAWPYKKEREI-SEEV 336 (390)
Q Consensus 265 ~ggeLLkrtrkG~l~--wk~VSvyink~~qV----ilKmKs-khv~Gafskkkk~VV~~V~~~~pawp~r~e~~~-~~~~ 336 (390)
+.|=|+.++.++ ++ |-..-+...+.+.+ ...-+| +.++|.. .....+++-.+. +...+. +.|.
T Consensus 1 k~GYLy~~~k~~-~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v---~~~e~~~l~sc~-----~r~~~~~dRRF 71 (104)
T cd01249 1 KEGYLYMQEKSK-FGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAV---AQDETLTLKSCS-----RRKTESIDKRF 71 (104)
T ss_pred CCceEEEEcCCC-CCCeEEEEEEEEEcCCcEEEEEecccccccccCccc---ccceEEeeeecc-----ccccCCcccee
Confidence 357789998666 55 55444443443333 334433 2233432 244556665554 334444 7888
Q ss_pred EEEEEcCC--eeEEEEeCCchhHhhHHHHHH
Q 016373 337 YFGLKTAQ--GLLEFKCKSKIHKQRWVDGIQ 365 (390)
Q Consensus 337 yFgLkTa~--G~vEfec~s~~~~q~W~~gI~ 365 (390)
+|-|.+.+ |.+-|...|+.+++.|.+.|.
T Consensus 72 CFei~~~~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 72 CFDVEVEEKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred eEeeeecCCCCeEEEEecCHHHHHHHHHhhc
Confidence 99996555 599999999999999998874
No 13
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=89.48 E-value=3.3 Score=34.40 Aligned_cols=34 Identities=24% Similarity=0.515 Sum_probs=31.6
Q ss_pred eEEEEEcCCeeEEEEeCCchhHhhHHHHHHHHHH
Q 016373 336 VYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 336 ~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~lL~ 369 (390)
..|.|.|.+++..|.|++..+++.|++.|++.|.
T Consensus 68 ~~F~i~t~~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 68 YGVTLVTPERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred ceEEEEeCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 3899999999999999999999999999998764
No 14
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=87.84 E-value=5 Score=32.80 Aligned_cols=32 Identities=16% Similarity=0.421 Sum_probs=30.1
Q ss_pred eeEEEEEcCCeeEEEEeCCchhHhhHHHHHHH
Q 016373 335 EVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 335 ~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
...|-|.|..++..|.|+|..+.+.|++.|+.
T Consensus 61 ~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~ 92 (95)
T cd01265 61 KGRFEIHSNNEVIALKASSDKQMNYWLQALQS 92 (95)
T ss_pred CCEEEEEcCCcEEEEECCCHHHHHHHHHHHHh
Confidence 56899999999999999999999999999986
No 15
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=87.33 E-value=5.7 Score=34.53 Aligned_cols=97 Identities=15% Similarity=0.226 Sum_probs=57.5
Q ss_pred CCCccceeeecc-CCeeeEEEEEEEEcCCcEEEE---Eecccccccc----ccccceeEEEeeec-CcccCCCCcccccc
Q 016373 263 HPCEGELMQLTR-KGVLRCKFVSVYINKKSQVIV---KLKSKHVGGA----FSKKNKCIVYGVCD-ESAAWPYKKEREIS 333 (390)
Q Consensus 263 la~ggeLLkrtr-kG~l~wk~VSvyink~~qVil---KmKskhv~Ga----fskkkk~VV~~V~~-~~pawp~r~e~~~~ 333 (390)
|.++|+|.+.++ +|..+=|.+..| ++++|+ +..+.++-|. |.=|-+..+.++.- |+|. . .+
T Consensus 4 lI~EG~L~ki~~~~~~~q~R~~FLF---d~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d---~----~~ 73 (112)
T cd01261 4 FIMEGTLTRVGPSKKAKHERHVFLF---DGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPD---S----SE 73 (112)
T ss_pred ccccCcEEEEecccCCcceEEEEEe---cCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCC---C----cc
Confidence 458899997663 566665555554 356665 3333344333 43333322222211 2211 1 12
Q ss_pred eeeEEEEEcC-CeeEEEEeCCchhHhhHHHHHHHHHH
Q 016373 334 EEVYFGLKTA-QGLLEFKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 334 ~~~yFgLkTa-~G~vEfec~s~~~~q~W~~gI~~lL~ 369 (390)
-..-|-|.|. +..++|-|++..+|+.|.+.+..++.
T Consensus 74 ~knaF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 74 YKNAFEIILKDGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred cCceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 3567888886 45799999999999999999877653
No 16
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=85.89 E-value=1.1 Score=38.41 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=31.3
Q ss_pred ceeeEEEEEcCCeeEEEEeCCchhHhhHHHHHHHH
Q 016373 333 SEEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNL 367 (390)
Q Consensus 333 ~~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~l 367 (390)
..++-|-|.|.+++++|.|+|..+.+.|++.|+.+
T Consensus 87 ~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 87 GLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred CCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 34677899999999999999999999999999863
No 17
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=82.59 E-value=12 Score=30.80 Aligned_cols=33 Identities=18% Similarity=0.220 Sum_probs=30.2
Q ss_pred eeEEEEEcCCeeEEEEeCCchhHhhHHHHHHHH
Q 016373 335 EVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNL 367 (390)
Q Consensus 335 ~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~l 367 (390)
...|.|.|..++..|.|+|+.+.+.|++.|+..
T Consensus 65 ~~~F~I~t~~rt~~~~A~s~~e~~~Wi~ai~~~ 97 (100)
T cd01233 65 PNTFAVCTKHRGYLFQALSDKEMIDWLYALNPL 97 (100)
T ss_pred CcEEEEECCCCEEEEEcCCHHHHHHHHHHhhhh
Confidence 568999999999999999999999999999764
No 18
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=80.17 E-value=18 Score=27.54 Aligned_cols=87 Identities=21% Similarity=0.232 Sum_probs=51.7
Q ss_pred cceeeeccCCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeeecCcccCCCCcccccceeeEEEEEcCC-e
Q 016373 267 GELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWPYKKEREISEEVYFGLKTAQ-G 345 (390)
Q Consensus 267 geLLkrtrkG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp~r~e~~~~~~~yFgLkTa~-G 345 (390)
|-|+|..+.. =.|+..=++++ ++.+.+ -+++.-.+ ..-...+.++-+... .+......|-|.|.+ .
T Consensus 3 G~L~k~~~~~-~~W~~r~~vl~-~~~L~~-~~~~~~~~--~~~~~~i~l~~~~~~--------~~~~~~~~F~i~~~~~~ 69 (91)
T cd01246 3 GWLLKWTNYL-KGWQKRWFVLD-NGLLSY-YKNKSSMR--GKPRGTILLSGAVIS--------EDDSDDKCFTIDTGGDK 69 (91)
T ss_pred EEEEEecccC-CCceeeEEEEE-CCEEEE-EecCccCC--CCceEEEEeceEEEE--------ECCCCCcEEEEEcCCCC
Confidence 5677766543 45777767776 444444 23332111 122233333322210 111236789899988 6
Q ss_pred eEEEEeCCchhHhhHHHHHHH
Q 016373 346 LLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 346 ~vEfec~s~~~~q~W~~gI~~ 366 (390)
.+.|.++|..+.+.|++.|+.
T Consensus 70 ~~~~~a~s~~e~~~Wi~al~~ 90 (91)
T cd01246 70 TLHLRANSEEERQRWVDALEL 90 (91)
T ss_pred EEEEECCCHHHHHHHHHHHHh
Confidence 999999999999999999864
No 19
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=79.19 E-value=20 Score=28.58 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=29.6
Q ss_pred ceeeEEEEEcCC-eeEEEEeCCchhHhhHHHHHHH
Q 016373 333 SEEVYFGLKTAQ-GLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 333 ~~~~yFgLkTa~-G~vEfec~s~~~~q~W~~gI~~ 366 (390)
.....|-|.|.. +.+.|.|+|..+.+.|++.|..
T Consensus 61 ~k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~ai~~ 95 (96)
T cd01260 61 KKKYAFKVCHPVYKSFYFAAETLDDLSQWVNHLIT 95 (96)
T ss_pred CCceEEEECCCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 356779999988 8999999999999999998853
No 20
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=78.69 E-value=4.1 Score=34.47 Aligned_cols=34 Identities=12% Similarity=0.316 Sum_probs=30.6
Q ss_pred eeeEEEEEcCCeeEEEEeCCchhHhhHHHHHHHH
Q 016373 334 EEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNL 367 (390)
Q Consensus 334 ~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~l 367 (390)
+..-|.|.|..+..-|-|+|..+.+.|.+.|..|
T Consensus 68 ~~~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~~ 101 (101)
T cd01257 68 HRHLIALYTRDEYFAVAAENEAEQDSWYQALLEL 101 (101)
T ss_pred cCeEEEEEeCCceEEEEeCCHHHHHHHHHHHhhC
Confidence 4578999999999999999999999999998753
No 21
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=77.00 E-value=26 Score=30.04 Aligned_cols=35 Identities=14% Similarity=0.217 Sum_probs=31.3
Q ss_pred eeEEEEEcCCeeEEEEeCCchhHhhHHHHHHHHHH
Q 016373 335 EVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 335 ~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~lL~ 369 (390)
..-|-|.|.+..+.+-|.|..+++.|.+.|+.-..
T Consensus 65 ~n~f~I~~~~kSf~v~A~s~~eK~eWl~~i~~ai~ 99 (104)
T cd01218 65 RNGWIIKTPTKSFAVYAATETEKREWMLHINKCVT 99 (104)
T ss_pred cceEEEecCCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 56799999999999999999999999999987543
No 22
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=75.85 E-value=19 Score=31.36 Aligned_cols=92 Identities=17% Similarity=0.134 Sum_probs=52.6
Q ss_pred eeccCCeeeEEEEEEEEcCCcEEEEEeccccccc-cccccceeEEEeeecCcccCCCCcccccceeeEEEEEcCCe-eEE
Q 016373 271 QLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGG-AFSKKNKCIVYGVCDESAAWPYKKEREISEEVYFGLKTAQG-LLE 348 (390)
Q Consensus 271 krtrkG~l~wk~VSvyink~~qVilKmKskhv~G-afskkkk~VV~~V~~~~pawp~r~e~~~~~~~yFgLkTa~G-~vE 348 (390)
++|+-|.=-|+.+-..+...--.+-|=.++.--+ .++.-...|- +..++.. ..........-|.|+|..| .+-
T Consensus 17 kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Is--i~~a~~~---ia~dy~Kr~~VF~L~~~~g~~~l 91 (117)
T cd01230 17 RKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAIS--IHHALAT---RASDYSKKPHVFRLRTADWREFL 91 (117)
T ss_pred ccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEE--eccceeE---eeccccCCCcEEEEEcCCCCEEE
Confidence 5666677789988777752222222222221111 1112222222 2222200 0011224566789999985 999
Q ss_pred EEeCCchhHhhHHHHHHHH
Q 016373 349 FKCKSKIHKQRWVDGIQNL 367 (390)
Q Consensus 349 fec~s~~~~q~W~~gI~~l 367 (390)
|.|.|..+-+.|++.|+..
T Consensus 92 fqA~~~ee~~~Wi~~I~~~ 110 (117)
T cd01230 92 FQTSSLKELQSWIERINVV 110 (117)
T ss_pred EECCCHHHHHHHHHHHHHH
Confidence 9999999999999999864
No 23
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=75.61 E-value=30 Score=28.86 Aligned_cols=33 Identities=15% Similarity=0.344 Sum_probs=29.8
Q ss_pred eeeEEEEEcCCeeEEEEeCCchhHhhHHHHHHH
Q 016373 334 EEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 334 ~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
..+.|-|.|..++..|.|++..+.+.|++.|+.
T Consensus 73 ~~~~F~i~t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 73 FKYPFQVVHDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred cCccEEEEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 457899999999999999999999999999875
No 24
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=74.95 E-value=12 Score=31.78 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=47.2
Q ss_pred eeccCCeeeEEEEEEEEcCCcEEEEEecc--ccccccccc---ccee---EEEeeecCcccCCCCcccccceeeEEEEEc
Q 016373 271 QLTRKGVLRCKFVSVYINKKSQVIVKLKS--KHVGGAFSK---KNKC---IVYGVCDESAAWPYKKEREISEEVYFGLKT 342 (390)
Q Consensus 271 krtrkG~l~wk~VSvyink~~qVilKmKs--khv~Gafsk---kkk~---VV~~V~~~~pawp~r~e~~~~~~~yFgLkT 342 (390)
|+++.|.=.||.+-+.+. |+++.=-|. .+..+.+.. -+.. -+++++..+.. ....-......|=|+|
T Consensus 17 kk~~~~~R~Wk~~y~vL~--g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~---~a~dY~Kr~~VFrL~~ 91 (119)
T PF15410_consen 17 KKASRSKRSWKQVYAVLQ--GGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAE---IASDYTKRKNVFRLRT 91 (119)
T ss_dssp CC---S---EEEEEEEEE--TTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEE---EETTBTTCSSEEEEE-
T ss_pred CCcCCCCCCccEEeEEEE--CCEEEEEccCcccccCCcccccccccCcceeEEEecceEEE---eCcccccCCeEEEEEe
Confidence 566668889999999997 444433333 333333331 1111 11222211110 0001124678899999
Q ss_pred CCe-eEEEEeCCchhHhhHHHHHHH
Q 016373 343 AQG-LLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 343 a~G-~vEfec~s~~~~q~W~~gI~~ 366 (390)
++| ..=|.|.|..+-+.|++.|+.
T Consensus 92 ~dg~e~Lfqa~~~~~m~~Wi~~IN~ 116 (119)
T PF15410_consen 92 ADGSEYLFQASDEEEMNEWIDAINY 116 (119)
T ss_dssp TTS-EEEEE-SSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhh
Confidence 986 899999999999999999985
No 25
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=74.94 E-value=6.3 Score=33.68 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=29.9
Q ss_pred eeEEEEEcCCeeEEEEeCCchhHhhHHHHHHH
Q 016373 335 EVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 335 ~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
+..|.+.|...+.-|.++|..+++.|.+.|+.
T Consensus 68 ~~~Fei~tp~rt~~l~A~se~e~e~WI~~i~~ 99 (101)
T cd01264 68 PKAFEIFTADKTYILKAKDEKNAEEWLQCLNI 99 (101)
T ss_pred CcEEEEEcCCceEEEEeCCHHHHHHHHHHHHh
Confidence 57999999999999999999999999998874
No 26
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=72.64 E-value=6.2 Score=32.28 Aligned_cols=32 Identities=13% Similarity=0.346 Sum_probs=28.4
Q ss_pred eeEEEEEcCC-eeEEEEeCCchhHhhHHHHHHH
Q 016373 335 EVYFGLKTAQ-GLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 335 ~~yFgLkTa~-G~vEfec~s~~~~q~W~~gI~~ 366 (390)
.+-|.|.|.. .+..|.++|..+.+.|++.|++
T Consensus 58 ~~~F~i~~~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 58 ENRFDISVNENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred CCEEEEEeCCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 4679897776 8999999999999999999985
No 27
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=72.32 E-value=50 Score=27.94 Aligned_cols=30 Identities=7% Similarity=0.245 Sum_probs=24.7
Q ss_pred eeEEEEeCCchhHhhHHHHHHHHHHhhhhH
Q 016373 345 GLLEFKCKSKIHKQRWVDGIQNLLRQVSSL 374 (390)
Q Consensus 345 G~vEfec~s~~~~q~W~~gI~~lL~~~~~~ 374 (390)
.++.|.|++..+.+.|++.|+..+......
T Consensus 90 ~~~~~~A~s~~e~~~Wi~al~~~~~~~~~~ 119 (125)
T cd01252 90 SVYRISAANDEEMDEWIKSIKASISPNPFY 119 (125)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHhcCchH
Confidence 367799999999999999999987655443
No 28
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=71.82 E-value=29 Score=29.04 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=51.5
Q ss_pred cCCCccceeeeccCCeeeEEEEEEEEcC-CcEEEEEeccccccccccccceeEEEeeecCcccCC----CCcc---cc--
Q 016373 262 RHPCEGELMQLTRKGVLRCKFVSVYINK-KSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWP----YKKE---RE-- 331 (390)
Q Consensus 262 ~la~ggeLLkrtrkG~l~wk~VSvyink-~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp----~r~e---~~-- 331 (390)
.|-+|..|.|-++++ +-+.+.+.++. .++++-+=..+. ..+++-++--.|+-... ++.. ..
T Consensus 5 ~L~~G~~~~K~~~~~--~~~~~~f~ld~~~~~l~W~~~~~~-------~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~ 75 (115)
T cd01248 5 ALQRGSVFIKWDDTS--RERRRLFRLDEKGFFLYWKDEGKK-------EKKVLDISSIKEIRTGKQPKDLKLRAELNQGN 75 (115)
T ss_pred HHhCCCEEEEEcCCC--ceeeEEEEEcCCCcEEEEeCCCCc-------cccEEEehhhhhhhCCCCCcchHHhhhhhcCC
Confidence 356888888888733 33345555654 455554422221 22233222223332221 0100 10
Q ss_pred cceeeEE----EEEcCCeeEEEEeCCchhHhhHHHHHHHH
Q 016373 332 ISEEVYF----GLKTAQGLLEFKCKSKIHKQRWVDGIQNL 367 (390)
Q Consensus 332 ~~~~~yF----gLkTa~G~vEfec~s~~~~q~W~~gI~~l 367 (390)
..+.++| |-.-.-..+-|-|.|..+.+.|++||.+|
T Consensus 76 ~~e~~~fTIiy~~~~~~k~L~lVA~s~~~a~~W~~gL~~L 115 (115)
T cd01248 76 SLEERCFTIVYGTDLNLKSLDLVAPSEEEAKTWVSGLRKL 115 (115)
T ss_pred CccccEEEEEECCCCCeeEEEEEECCHHHHHHHHHHHhhC
Confidence 2345556 22211347999999999999999999874
No 29
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=71.46 E-value=41 Score=28.51 Aligned_cols=35 Identities=17% Similarity=0.469 Sum_probs=29.0
Q ss_pred eeeEEEEEcCC---eeEEEEeCCchhHhhHHHHHHHHH
Q 016373 334 EEVYFGLKTAQ---GLLEFKCKSKIHKQRWVDGIQNLL 368 (390)
Q Consensus 334 ~~~yFgLkTa~---G~vEfec~s~~~~q~W~~gI~~lL 368 (390)
+.+-|.|...+ ..++|.|+|..+|+.|++.|+.+|
T Consensus 58 d~~~F~v~~~~~p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 58 EPLCFRVIPFDDPKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred CCcEEEEEecCCCceEEEEEecCHHHHHHHHHHHHHHh
Confidence 36888664443 599999999999999999999875
No 30
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=67.71 E-value=59 Score=29.26 Aligned_cols=38 Identities=16% Similarity=0.294 Sum_probs=32.5
Q ss_pred ceeeEEEEEcCCe--eEEEEeCCchhHhhHHHHHHHHHHh
Q 016373 333 SEEVYFGLKTAQG--LLEFKCKSKIHKQRWVDGIQNLLRQ 370 (390)
Q Consensus 333 ~~~~yFgLkTa~G--~vEfec~s~~~~q~W~~gI~~lL~~ 370 (390)
.+.+-|.|.+..+ .+.|.|.+...++.|++.|..+|-+
T Consensus 78 gd~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~~I~~iL~~ 117 (133)
T cd01227 78 GDTKKFEIWYNAREEVYILQAPTPEIKAAWVNEIRKVLTS 117 (133)
T ss_pred CCccEEEEEeCCCCcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 4578898887765 8899999999999999999998843
No 31
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=62.48 E-value=13 Score=31.48 Aligned_cols=34 Identities=15% Similarity=0.487 Sum_probs=27.8
Q ss_pred ceeeEEEEEcCCeeEEEEeCCchhHhhHHHHHHH
Q 016373 333 SEEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 333 ~~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
....-|-+.|.++.+-|.|++..+...|.+.|+.
T Consensus 78 ~~~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~ 111 (112)
T PF15413_consen 78 IHLKVFSIFTPTKTFHLRCETREDRYDWIEALQE 111 (112)
T ss_dssp -SSEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCCcEEECCCcEEEEEECCHHHHHHHHHHHHh
Confidence 4556688899999999999999999999999874
No 32
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=61.57 E-value=68 Score=27.24 Aligned_cols=90 Identities=16% Similarity=0.271 Sum_probs=52.0
Q ss_pred ccceeeeccCCeeeEEEEEEEEcC---CcEEE-EEecc-ccccccccccceeEEEeeecCcccCCCCcccccceeeEEEE
Q 016373 266 EGELMQLTRKGVLRCKFVSVYINK---KSQVI-VKLKS-KHVGGAFSKKNKCIVYGVCDESAAWPYKKEREISEEVYFGL 340 (390)
Q Consensus 266 ggeLLkrtrkG~l~wk~VSvyink---~~qVi-lKmKs-khv~Gafskkkk~VV~~V~~~~pawp~r~e~~~~~~~yFgL 340 (390)
.|=|+|++..=.--||+=.+.+.. +++.- ++=++ ++--|.+- -..+.|..|++.+ -+...+|-|
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~-l~~~~V~~v~ds~----------~~r~~cFel 70 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLID-LSDAYLYPVHDSL----------FGRPNCFQI 70 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceee-ccccEEEEccccc----------cCCCeEEEE
Confidence 355778875325678887766641 23322 11100 11112111 1222455554421 134688988
Q ss_pred EcCCe-eEEEEeCCchhHhhHHHHHHH
Q 016373 341 KTAQG-LLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 341 kTa~G-~vEfec~s~~~~q~W~~gI~~ 366 (390)
.|..+ .+=|-|.+..+++.|.+.|+.
T Consensus 71 ~~~~~~~~y~~~a~~~er~~Wi~~l~~ 97 (98)
T cd01245 71 VERALPTVYYSCRSSEERDKWIESLQA 97 (98)
T ss_pred ecCCCCeEEEEeCCHHHHHHHHHHHhc
Confidence 88876 888999999999999998874
No 33
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=60.05 E-value=84 Score=26.51 Aligned_cols=32 Identities=3% Similarity=0.318 Sum_probs=28.5
Q ss_pred eeEEEEEcCCeeEEEEeCCchhHhhHHHHHHH
Q 016373 335 EVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 335 ~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
...|-+-|..++.-|.|+|..+.+.|.+.|+.
T Consensus 66 ~~~fqivt~~r~~yi~a~s~~E~~~Wi~al~k 97 (98)
T cd01244 66 VDIITIVCEDDTMQLQFEAPVEATDWLNALEK 97 (98)
T ss_pred CceEEEEeCCCeEEEECCCHHHHHHHHHHHhc
Confidence 35798899999999999999999999998864
No 34
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=56.91 E-value=1.2e+02 Score=26.76 Aligned_cols=96 Identities=16% Similarity=0.175 Sum_probs=55.5
Q ss_pred Cccceeeecc-CCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeeecCcccCCCCcccc-c-ceeeEEEEE
Q 016373 265 CEGELMQLTR-KGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWPYKKERE-I-SEEVYFGLK 341 (390)
Q Consensus 265 ~ggeLLkrtr-kG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp~r~e~~-~-~~~~yFgLk 341 (390)
..|||.+.++ +|.-+=|.+-.|- .|+|+ -|+.++-|-.=.+|.-+.++.+.=.+- |.+.+.. + .=..-|-|.
T Consensus 4 ~~Gel~~~s~~~g~~q~R~~FLFD---~~LI~-CKkd~~r~~~~~yKgri~l~~~~I~d~-~Dg~~~~~~~~~knafkl~ 78 (109)
T cd01224 4 LQGEATRQKQNKGWNSSRVLFLFD---HQMVL-CKKDLIRRDHLYYKGRIDLDRCEVVNI-RDGKMFSSGHTIKNSLKIY 78 (109)
T ss_pred EeeeEEEEecccCCcccEEEEEec---ceEEE-EecccccCCcEEEEEEEEcccEEEEEC-CCCccccCCceeEEEEEEE
Confidence 5688888876 4777766555553 45555 666666554555565565555421111 1111111 1 123334333
Q ss_pred cCC--eeEEEEeCCchhHhhHHHHHH
Q 016373 342 TAQ--GLLEFKCKSKIHKQRWVDGIQ 365 (390)
Q Consensus 342 Ta~--G~vEfec~s~~~~q~W~~gI~ 365 (390)
-.+ -.+.|-|++..+|+.|.+.+.
T Consensus 79 ~~~~~~~~~f~~Kt~e~K~~Wm~a~~ 104 (109)
T cd01224 79 SESTDEWYLFSFKSAERKHRWLSAFA 104 (109)
T ss_pred EcCCCeEEEEEECCHHHHHHHHHHHH
Confidence 333 358999999999999999875
No 35
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=55.67 E-value=1.1e+02 Score=26.57 Aligned_cols=37 Identities=27% Similarity=0.498 Sum_probs=30.5
Q ss_pred ceeeEEEEEcCC-----eeEEEEeCCchhHhhHHHHHHHHHH
Q 016373 333 SEEVYFGLKTAQ-----GLLEFKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 333 ~~~~yFgLkTa~-----G~vEfec~s~~~~q~W~~gI~~lL~ 369 (390)
.+.+-|+|.+.. -.+-+.+.|...|+.|+..|..+|.
T Consensus 72 gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 72 GDPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred CCCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 457889885544 3778999999999999999999985
No 36
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=55.67 E-value=1.2e+02 Score=25.14 Aligned_cols=32 Identities=25% Similarity=0.282 Sum_probs=28.6
Q ss_pred eEEEEEcCCeeEEEEeCCchhHhhHHHHHHHH
Q 016373 336 VYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNL 367 (390)
Q Consensus 336 ~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~l 367 (390)
.-|.+.|..++.-|-++|..+.+.|+..|..+
T Consensus 76 ~~f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 76 YGFDIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred eEEEEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 45889999999999999999999999999653
No 37
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=55.38 E-value=28 Score=29.77 Aligned_cols=32 Identities=13% Similarity=0.170 Sum_probs=29.4
Q ss_pred eeeEEEEEcCCeeEEEEeCCchhHhhHHHHHH
Q 016373 334 EEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQ 365 (390)
Q Consensus 334 ~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~ 365 (390)
+...|.|.|..++.-|-|++..+.+.|.+.|+
T Consensus 70 ~~~~f~I~tp~R~f~l~Aete~E~~~Wi~~l~ 101 (104)
T cd01236 70 QKFSICILTPDKEHFIKAETKEEISWWLNMLM 101 (104)
T ss_pred CccEEEEECCCceEEEEeCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999876
No 38
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=52.48 E-value=42 Score=35.36 Aligned_cols=80 Identities=19% Similarity=0.216 Sum_probs=52.6
Q ss_pred eeccCCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeeecCcccCCCCcccccceeeEEEEE--cCCeeEE
Q 016373 271 QLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWPYKKEREISEEVYFGLK--TAQGLLE 348 (390)
Q Consensus 271 krtrkG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp~r~e~~~~~~~yFgLk--Ta~G~vE 348 (390)
--|..|.|+|+. .++=.|-|.|--+| .-..-+|-+|..+-.+ +..-++||=. =....+.
T Consensus 25 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 85 (481)
T PLN02958 25 TLTAEGKLRWTD-------SGQRCLTVEKEVLG-FVIEGSKIRVKTIVEK-----------GGGICCRGSAGALARKDFV 85 (481)
T ss_pred EeccCCEEEeec-------CCcceEEEeeeeeE-EEEeCCEEEEEEEEec-----------CCcccccCCCCCceeeeEE
Confidence 455889999992 45556777666554 3334444455544321 1345566432 2235799
Q ss_pred EEeCCchhHhhHHHHHHHHHH
Q 016373 349 FKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 349 fec~s~~~~q~W~~gI~~lL~ 369 (390)
|.|.+..+++.|++.|...|.
T Consensus 86 ~~~~~~~~~~~w~~~~~~~~~ 106 (481)
T PLN02958 86 FEPLSDESRRLWCQKLRDYLD 106 (481)
T ss_pred EeCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999998775
No 39
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=50.88 E-value=77 Score=32.81 Aligned_cols=97 Identities=22% Similarity=0.281 Sum_probs=57.7
Q ss_pred CccceeeeccCCeeeEEEEEEEEc----CCcEEEEEecc----cccccccc---ccceeEE------EeeecCcccCCCC
Q 016373 265 CEGELMQLTRKGVLRCKFVSVYIN----KKSQVIVKLKS----KHVGGAFS---KKNKCIV------YGVCDESAAWPYK 327 (390)
Q Consensus 265 ~ggeLLkrtrkG~l~wk~VSvyin----k~~qVilKmKs----khv~Gafs---kkkk~VV------~~V~~~~pawp~r 327 (390)
..|.+.+ ..+.+.||..-++|. ...++...... -.+.=+++ ..+.||- .|||.=. .
T Consensus 375 ~~g~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---- 447 (496)
T PTZ00283 375 YEGIVKK--QSSDLSWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVP-S---- 447 (496)
T ss_pred eeeEEec--ccCCcccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhccccccc-H----
Confidence 4455554 355666777766664 22233332222 22222222 2345663 5565421 1
Q ss_pred ccccc-ceeeEEEEEcCCe-eEEEEeCCchhHhhHHHHHHHHHH
Q 016373 328 KEREI-SEEVYFGLKTAQG-LLEFKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 328 ~e~~~-~~~~yFgLkTa~G-~vEfec~s~~~~q~W~~gI~~lL~ 369 (390)
.-.. ....-|.|.+..| .+-|.|++..+++.|.+.||+-|-
T Consensus 448 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 448 -KYTGSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred -HhhCCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 1112 2356788888887 899999999999999999998774
No 40
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=50.16 E-value=52 Score=33.51 Aligned_cols=95 Identities=18% Similarity=0.188 Sum_probs=59.4
Q ss_pred CCccceeeeccCCeeeEEEEEEEEcCCcEEEEEecccc-ccccccccceeE--EEeeecCcccCCCCcccccceeeEEEE
Q 016373 264 PCEGELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKH-VGGAFSKKNKCI--VYGVCDESAAWPYKKEREISEEVYFGL 340 (390)
Q Consensus 264 a~ggeLLkrtrkG~l~wk~VSvyink~~qVilKmKskh-v~Gafskkkk~V--V~~V~~~~pawp~r~e~~~~~~~yFgL 340 (390)
...|-|++...+. +|+.=-+++. .+++.+..+... ..|. ..+--+. |.+||..-+ ........+|.+
T Consensus 378 ~~~G~l~k~~~~~--~wk~ry~~l~-~~~l~~~~~~~~~~~~~-~~~~~~l~~~~~v~pv~~------~~~~~~~~~~~i 447 (478)
T PTZ00267 378 THGGYLYKYSSDM--RWKKRYFYIG-NGQLRISLSENPENDGV-APKSVNLETVNDVFPVPE------VYSQKHPNQLVL 447 (478)
T ss_pred ccceEEeccCCCc--chhhheEEec-CCceEEEeccccccCCC-CCccccHHHhcccccccH------HhcCCCCceEEE
Confidence 4678888877665 4665556664 678777765322 1121 1111122 667764311 111234566888
Q ss_pred EcCCe-eEEEEeCCchhHhhHHHHHHHHH
Q 016373 341 KTAQG-LLEFKCKSKIHKQRWVDGIQNLL 368 (390)
Q Consensus 341 kTa~G-~vEfec~s~~~~q~W~~gI~~lL 368 (390)
+|..| .+=|.+++..+.+.|+..|++-|
T Consensus 448 ~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 448 WFNNGQKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred EecCCcEEEEecCChHHHHHHHHHHHHHh
Confidence 88665 78889999999999999999866
No 41
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=47.98 E-value=1.4e+02 Score=24.01 Aligned_cols=33 Identities=18% Similarity=0.448 Sum_probs=28.0
Q ss_pred eeeEEEEEcCCe-eEEEEeCCchhHhhHHHHHHH
Q 016373 334 EEVYFGLKTAQG-LLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 334 ~~~yFgLkTa~G-~vEfec~s~~~~q~W~~gI~~ 366 (390)
...-|-|++..| .+-|.++|..+.+.|++.|+.
T Consensus 70 ~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 70 KKHVFRLRLPDGAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred CceEEEEEecCCCEEEEECCCHHHHHHHHHHHhc
Confidence 346689988775 899999999999999999864
No 42
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=44.31 E-value=31 Score=30.82 Aligned_cols=51 Identities=18% Similarity=0.282 Sum_probs=35.0
Q ss_pred EeeecCcccCCCCcccccceeeEE-EEEcCCeeEEEEeCCchhHhhHHHHHHH
Q 016373 315 YGVCDESAAWPYKKEREISEEVYF-GLKTAQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 315 ~~V~~~~pawp~r~e~~~~~~~yF-gLkTa~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
.|-|+..|.=|..++.-..++.+| ++|-. -.|.|-|++..+++.|++.+-+
T Consensus 57 vDy~~~~~~~~~~~~~~~gg~~ff~avkeg-d~~~fa~~de~~r~lwvqa~yr 108 (117)
T cd01234 57 VDYMPESDPDPNSELSLQGGRHFFNAVKEG-DELKFATDDENERHLWVQAMYR 108 (117)
T ss_pred EeccCCCCCCcccccccccchhhhheeccC-cEEEEeccchHHHHHHHHHHHH
Confidence 455666666565554433566666 66532 3789999999999999987543
No 43
>PF15409 PH_8: Pleckstrin homology domain
Probab=38.47 E-value=56 Score=27.62 Aligned_cols=34 Identities=24% Similarity=0.452 Sum_probs=29.8
Q ss_pred ceeeEEEEEcCCeeEEEEeCCchhHhhHHHHHHH
Q 016373 333 SEEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 333 ~~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
++.+-|-|.|..-+--|++.|+.+.|.|++.++.
T Consensus 54 ~~~~~I~idsg~~i~hLKa~s~~~f~~Wv~aL~~ 87 (89)
T PF15409_consen 54 KKSRRIDIDSGDEIWHLKAKSQEDFQRWVSALQK 87 (89)
T ss_pred CCCCEEEEEcCCeEEEEEcCCHHHHHHHHHHHHh
Confidence 4567888888888999999999999999999875
No 44
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=38.14 E-value=2.6e+02 Score=24.93 Aligned_cols=91 Identities=15% Similarity=0.254 Sum_probs=50.3
Q ss_pred CCeeeEEEEEEEEcCCcEEEEEecccccccc-ccccceeEEEeeecCcccCCCCcc-cccceeeEEEEEcCCe--eEEEE
Q 016373 275 KGVLRCKFVSVYINKKSQVIVKLKSKHVGGA-FSKKNKCIVYGVCDESAAWPYKKE-REISEEVYFGLKTAQG--LLEFK 350 (390)
Q Consensus 275 kG~l~wk~VSvyink~~qVilKmKskhv~Ga-fskkkk~VV~~V~~~~pawp~r~e-~~~~~~~yFgLkTa~G--~vEfe 350 (390)
++.-+-|.+.+|- ..-|+.|-+..+.|+. |+=|......++.-+...- .+.+ ...+-+++|-|-.-+| -++|-
T Consensus 17 ~~k~k~RyiFLFD--k~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~-~d~~~~~~~~~~~f~L~~~~~~~~~~f~ 93 (116)
T cd01223 17 DQKTKLRYIFLFD--KAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPS-RDTEGRDTRWKYGFYLAHKQGKTGFTFY 93 (116)
T ss_pred cCCCceeEEEEec--ceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCc-cCcccCCcceEEEEEEEecCCCccEEEE
Confidence 3445555555443 3566666555544322 4444433333322211110 0111 1124677887766665 79999
Q ss_pred eCCchhHhhHHHHHHHHH
Q 016373 351 CKSKIHKQRWVDGIQNLL 368 (390)
Q Consensus 351 c~s~~~~q~W~~gI~~lL 368 (390)
|++..+++.|.+.+.--+
T Consensus 94 ~Ktee~K~kWm~al~~a~ 111 (116)
T cd01223 94 FKTEHLRKKWLKALEMAM 111 (116)
T ss_pred eCCHHHHHHHHHHHHHHH
Confidence 999999999999886543
No 45
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=34.37 E-value=1.7e+02 Score=26.26 Aligned_cols=99 Identities=19% Similarity=0.304 Sum_probs=49.7
Q ss_pred CCCccceeeeccCCee---eE----EEEEEEEcCCcEEEEEecccccccccccc-----ceeEEEeeecCcccCCCCccc
Q 016373 263 HPCEGELMQLTRKGVL---RC----KFVSVYINKKSQVIVKLKSKHVGGAFSKK-----NKCIVYGVCDESAAWPYKKER 330 (390)
Q Consensus 263 la~ggeLLkrtrkG~l---~w----k~VSvyink~~qVilKmKskhv~Gafskk-----kk~VV~~V~~~~pawp~r~e~ 330 (390)
|-|-|||.+-...|.. +. +.|-+|+= .-++|=-|+| .++.|.-+ ...-|.++-...+.=|++..
T Consensus 3 LvK~GEL~~l~~~~~~~~~~~k~~~~~vylfLF--nDlLl~tkkK-~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~- 78 (125)
T cd01221 3 LVKRGELTQLEERGSSNILRKKLKARTIYLFLF--NDLLLITKKK-LGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSN- 78 (125)
T ss_pred eEEEeeEEEEeccCCcchhcccccCCcEEEEEe--cceEEEEEec-CCCeEEEEeeccccceEEeeccccccccccccc-
Confidence 5578888876555432 32 24444443 2233333333 25555542 22223333222222223211
Q ss_pred ccceeeEEEE--EcC-Ce---eEEEEeCCchhHhhHHHHHH
Q 016373 331 EISEEVYFGL--KTA-QG---LLEFKCKSKIHKQRWVDGIQ 365 (390)
Q Consensus 331 ~~~~~~yFgL--kTa-~G---~vEfec~s~~~~q~W~~gI~ 365 (390)
......-|=| -.+ +| .+.|.|++..++++|.+.+.
T Consensus 79 ~~~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 79 LVGRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred ccCCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcC
Confidence 1123344533 333 34 67888999999999998874
No 46
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=29.54 E-value=3.8e+02 Score=23.29 Aligned_cols=86 Identities=12% Similarity=0.225 Sum_probs=56.6
Q ss_pred CccceeeeccCCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeee-------cCcccCCCCcccccceeeE
Q 016373 265 CEGELMQLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVC-------DESAAWPYKKEREISEEVY 337 (390)
Q Consensus 265 ~ggeLLkrtrkG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~-------~~~pawp~r~e~~~~~~~y 337 (390)
..|+|++--.+-.-+...|.+|+=.+.=|+=.++. ++++.....+ .|+|. .+ .=+--
T Consensus 4 ~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~---------~~ky~~~~~~~L~~i~V~ni~D---~~----~~kNa 67 (100)
T cd01226 4 LYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINA---------AGKYVMESTYSLNSVAVVNVKD---RE----NAKKV 67 (100)
T ss_pred EcCcEEEechhhCCccceEEEEEeccEEEEEEecc---------cceEEEEEEEehHHeEEEecCC---Cc----CcCce
Confidence 35677776666677778888777546555554433 2334333222 12221 10 12567
Q ss_pred EEEEcCCeeEEEEeCCchhHhhHHHHHHH
Q 016373 338 FGLKTAQGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 338 FgLkTa~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
|=|.|..+.--|.|.+..+|+.|-+-|++
T Consensus 68 fki~t~~~s~i~qaes~~~K~eWl~~le~ 96 (100)
T cd01226 68 LKLLIFPESRIYQCESARIKTEWFEELEQ 96 (100)
T ss_pred EEEEeCCccEEEEeCCHHHHHHHHHHHHH
Confidence 89999999888999999999999998876
No 47
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=24.93 E-value=1.4e+02 Score=27.07 Aligned_cols=37 Identities=19% Similarity=0.330 Sum_probs=30.4
Q ss_pred ceeeEEEEEcCC-------eeEEEEeCCchhHhhHHHHHHHHHH
Q 016373 333 SEEVYFGLKTAQ-------GLLEFKCKSKIHKQRWVDGIQNLLR 369 (390)
Q Consensus 333 ~~~~yFgLkTa~-------G~vEfec~s~~~~q~W~~gI~~lL~ 369 (390)
+=.|-|.|.|.+ -.+-|..+|-.+|++||..++.|=+
T Consensus 77 DiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l~~ 120 (122)
T cd01243 77 DIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSELHK 120 (122)
T ss_pred cCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHHHh
Confidence 456788888876 4788999999999999999988643
No 48
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=24.93 E-value=4.7e+02 Score=23.24 Aligned_cols=88 Identities=15% Similarity=0.204 Sum_probs=44.1
Q ss_pred eeeccCCeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeee--------------cCcccCCC------Cc-
Q 016373 270 MQLTRKGVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVC--------------DESAAWPY------KK- 328 (390)
Q Consensus 270 LkrtrkG~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~--------------~~~pawp~------r~- 328 (390)
|+|.+++...|-.+-||+=-+.=||+|.|..+ | ...|.|+ +|.|.=-+ ..
T Consensus 7 L~Rk~~~~~~~~di~~~LFDh~Lll~K~k~~~------k---~e~ykV~r~PIPLeLL~l~~~~d~~~~~~~~~r~s~s~ 77 (135)
T PF15405_consen 7 LKRKGDNSFNWVDIHVYLFDHYLLLTKPKKVN------K---REQYKVYRRPIPLELLVLESMDDPPPQRSIAKRPSSSL 77 (135)
T ss_dssp ----------S-EEEEEEESSEEEEEEEEEET------T---EEEEEESS--EEGGG-EEEE--TTTS---------S--
T ss_pred cccccccccccceeEEEeeccEEEEEEEEecC------C---eEEEEEEECCcCHHHeeeecccCCCcccCcccccccCc
Confidence 56777777778899999977899999987654 2 2234443 33333100 00
Q ss_pred -----c----------cccceeeEEEEEcC---CeeEEEEeCCchhHhhHHHHHHH
Q 016373 329 -----E----------REISEEVYFGLKTA---QGLLEFKCKSKIHKQRWVDGIQN 366 (390)
Q Consensus 329 -----e----------~~~~~~~yFgLkTa---~G~vEfec~s~~~~q~W~~gI~~ 366 (390)
. .+....+.|=++=. .+.+-|-|.|...++.|.+-|+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~ 133 (135)
T PF15405_consen 78 ISSSSSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEE 133 (135)
T ss_dssp -----SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHH
T ss_pred cCCccCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 0 11123445544333 23689999999999999999874
No 49
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=23.98 E-value=1.4e+02 Score=33.26 Aligned_cols=95 Identities=19% Similarity=0.239 Sum_probs=57.8
Q ss_pred cCCCccceeeeccC-CeeeEEEEEEEEcCCcEEEEEeccccccccccccceeEEEeeecCcccCCCCcc--ccc-ceeeE
Q 016373 262 RHPCEGELMQLTRK-GVLRCKFVSVYINKKSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWPYKKE--REI-SEEVY 337 (390)
Q Consensus 262 ~la~ggeLLkrtrk-G~l~wk~VSvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp~r~e--~~~-~~~~y 337 (390)
.|-|+|-|+|.+-+ |.-.=| +-|-.| +--.-.++|. .++| +|+.-.-+.+ |++-.. .++ +-..-
T Consensus 271 eLiKEG~l~Kis~k~~~~qeR-ylfLFN-d~~lyc~~r~-~~~~--~k~~~r~~~s-------~~~~~v~~~~~~~~~~t 338 (623)
T KOG4424|consen 271 ELIKEGQLQKISAKNGTTQER-YLFLFN-DILLYCKPRK-RLPG--SKYEVRARCS-------ISHMQVQEDDNEELPHT 338 (623)
T ss_pred HHhhccceeeeeccCCCccee-EEEEeh-hHHHhhhhhh-hccc--ceeccceeec-------cCcchhcccccccCCce
Confidence 36699999999887 655444 444445 2233334444 3333 3333333322 333332 222 22345
Q ss_pred EEEEcCCeeEEEEeCCchhHhhHHHHHHHHH
Q 016373 338 FGLKTAQGLLEFKCKSKIHKQRWVDGIQNLL 368 (390)
Q Consensus 338 FgLkTa~G~vEfec~s~~~~q~W~~gI~~lL 368 (390)
|=|+--+.-|||--.+..+++.|++.|+.-+
T Consensus 339 F~~~G~~r~vel~a~t~~ek~eWv~~I~~~I 369 (623)
T KOG4424|consen 339 FILTGKKRGVELQARTEQEKKEWVQAIQDAI 369 (623)
T ss_pred EEEecccceEEeecCchhhHHHHHHHHHHHH
Confidence 6555567899999999999999999999865
No 50
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=23.49 E-value=1.1e+02 Score=26.90 Aligned_cols=31 Identities=10% Similarity=0.328 Sum_probs=23.1
Q ss_pred eeEEEEEcCC----eeEEEEeCCchhHhhHHHHHH
Q 016373 335 EVYFGLKTAQ----GLLEFKCKSKIHKQRWVDGIQ 365 (390)
Q Consensus 335 ~~yFgLkTa~----G~vEfec~s~~~~q~W~~gI~ 365 (390)
...|-|-|.. +.+.|.|+|..+|+.|.+...
T Consensus 66 kf~I~l~~ps~~~~r~y~l~cdsEeqya~Wmaa~r 100 (106)
T cd01237 66 KFHIKLLIPTAEGMNEVWLRCDNEKQYAKWMAACR 100 (106)
T ss_pred ceEEEEecCCccCCeEEEEECCCHHHHHHHHHHHH
Confidence 3344444543 589999999999999998753
No 51
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=23.31 E-value=1.6e+02 Score=25.37 Aligned_cols=37 Identities=19% Similarity=0.269 Sum_probs=27.9
Q ss_pred eeeEEEEEcCCeeEEEEeCCchhHhhHHHHHHHHHHhh
Q 016373 334 EEVYFGLKTAQGLLEFKCKSKIHKQRWVDGIQNLLRQV 371 (390)
Q Consensus 334 ~~~yFgLkTa~G~vEfec~s~~~~q~W~~gI~~lL~~~ 371 (390)
...-|-+.|..++.-|+.. ..+-+.|++.|+.+..+.
T Consensus 66 ~~~~F~I~tp~RtY~l~d~-~~~A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 66 SFKTFFIHTPKRTYYLEDP-EGNAQQWVEAIEEVKKQY 102 (104)
T ss_dssp SSSEEEEEETTEEEEEE-T-TS-HHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCcEEEEECC-CCCHHHHHHHHHHHHHHh
Confidence 3457889999988888874 444677999999988764
No 52
>PF04842 DUF639: Plant protein of unknown function (DUF639); InterPro: IPR006927 The sequences in this family are plant proteins of unknown function.
Probab=21.19 E-value=61 Score=36.42 Aligned_cols=58 Identities=14% Similarity=0.371 Sum_probs=41.4
Q ss_pred CcEEEEEeccccccccccccceeEEEeeecCcccCCCCcccccceeeEE---EEEcCCeeEEEEeCCchhH
Q 016373 290 KSQVIVKLKSKHVGGAFSKKNKCIVYGVCDESAAWPYKKEREISEEVYF---GLKTAQGLLEFKCKSKIHK 357 (390)
Q Consensus 290 ~~qVilKmKskhv~Gafskkkk~VV~~V~~~~pawp~r~e~~~~~~~yF---gLkTa~G~vEfec~s~~~~ 357 (390)
.+..|| ||+|+-++ ..|+. |..+.+||||-- -.++-.|| |+.+-+.-+.+++..+..+
T Consensus 205 ~~E~IL-----~idgt~~t--qPVl~--hig~saWPGRLT-LTn~ALYFEa~gv~sy~~a~r~DLs~d~~q 265 (683)
T PF04842_consen 205 EDEKIL-----DIDGTATT--QPVLQ--HIGISAWPGRLT-LTNHALYFEAIGVVSYDKAVRYDLSKDLKQ 265 (683)
T ss_pred CCcEEE-----EecCCCCC--Cchhh--ccccccCCceeE-eecceeeeeecccccCCCceEEECCCCccc
Confidence 355665 67776554 45666 667899999943 34788999 8877788888988776443
No 53
>PF12306 PixA: Inclusion body protein; InterPro: IPR021087 This entry represents bacterial proteins that are typically between 173 and 191 amino acids in length. PixA is thought to be specifically produced in Xenorhabdus nematophila. It is an inclusion body protein []. This signature also identifies AidA.
Probab=21.06 E-value=6.6e+02 Score=23.12 Aligned_cols=43 Identities=28% Similarity=0.311 Sum_probs=30.3
Q ss_pred CCccceeeeccCC-eeeEEEEEEEEcCCcEEEEEeccccccc-ccc
Q 016373 264 PCEGELMQLTRKG-VLRCKFVSVYINKKSQVIVKLKSKHVGG-AFS 307 (390)
Q Consensus 264 a~ggeLLkrtrkG-~l~wk~VSvyink~~qVilKmKskhv~G-afs 307 (390)
.-+|||--.-+.| .+|||-.|+..|..-+|+|- +-.+.+| .|+
T Consensus 53 ~~~~~L~i~a~~GD~Irwr~tSls~n~~y~v~ly-~~~~~~~~v~~ 97 (172)
T PF12306_consen 53 QGGGELSIKANVGDTIRWRATSLSGNSEYSVILY-KFVKSSGDVFN 97 (172)
T ss_pred CCCCceEEeccCCCEEEEEEEeeccCCceeEEEE-EeeccCCcccC
Confidence 3667777555555 58999999999998877774 4444445 444
No 54
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=20.12 E-value=5e+02 Score=21.38 Aligned_cols=34 Identities=21% Similarity=0.474 Sum_probs=24.0
Q ss_pred eeeEEEEEcCC-e-eE--EEEeCCchhHhhHHHHHHHH
Q 016373 334 EEVYFGLKTAQ-G-LL--EFKCKSKIHKQRWVDGIQNL 367 (390)
Q Consensus 334 ~~~yFgLkTa~-G-~v--Efec~s~~~~q~W~~gI~~l 367 (390)
....|.|...+ . ++ -|.|+|..+.+.|++.|+..
T Consensus 64 ~~~~F~i~~~~~~~~~~r~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 64 RPNTFIIRCLQWTTVIERTFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred CcceEEEEeccCCcccCEEEEeCCHHHHHHHHHHHHhh
Confidence 34578886211 1 22 57799999999999999763
Done!